RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4001
(925 letters)
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 338 bits (870), Expect = e-108
Identities = 119/409 (29%), Positives = 183/409 (44%), Gaps = 94/409 (22%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHL----YVM 589
++K I + G F EV +V+ T +Y MK + K ++++ + + V+
Sbjct: 65 ILKVIGR--GAFSEVAVVKMKQTGQVYAMKIMNKWD-------MLKRGEVSCFREERDVL 115
Query: 590 KGSPH-------------NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAV 635
N LY VM+Y GGDL++LL K G +ARFY+AE+ A+
Sbjct: 116 VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAI 175
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+SVH++G++HRDIKPDNIL+DR GHI+L DFG C R +
Sbjct: 176 DSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR---------------- 219
Query: 696 SEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG----- 750
+ VGTP+Y++PE+L G
Sbjct: 220 -----------------------------------SLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 751 --YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQ-LSPEGAD 807
Y CDWW++GV YEM G PF A+++AET K+++++ L +P + + E D
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARD 304
Query: 808 LILQLCTGADKRLGKN-ASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVD 866
I +L + RLG+ A + + HPFF +D++ +R PP P + + DT NFD V+
Sbjct: 305 FIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDG-LRDSVPPFTPDFEGATDTCNFDLVE 363
Query: 867 PDKLRNSDSMLDELSDELKSPFHG----FFEFTFRR--FFDDGGGVPYP 909
+ LSD + G F +++ D P P
Sbjct: 364 DGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCMALRDSEVPGPTP 412
Score = 120 bits (302), Expect = 3e-29
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
++ T +YAMK + K D+LKR +V+ + ERD+L D W+ +L+++FQD++ LY VM
Sbjct: 81 KMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVM 140
Query: 140 DYIPG 144
+Y G
Sbjct: 141 EYYVG 145
Score = 77.1 bits (190), Expect = 6e-15
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEY 57
MK + K D+LKR +V+ + ERD+L D W+ +L+++FQ + ++ LV MEY
Sbjct: 91 MKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV------MEY 142
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 338 bits (869), Expect = e-108
Identities = 124/381 (32%), Positives = 177/381 (46%), Gaps = 84/381 (22%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHL----YVM 589
V+K I + G FGEV LVR T +Y MK + K ++++ D+ +M
Sbjct: 73 VVKVIGR--GAFGEVQLVRHKSTRKVYAMKLLSKFE-------MIKRSDSAFFWEERDIM 123
Query: 590 KGSPH-------------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVE 636
+ LY VM+Y+PGGDL++L+ E ARFY AE+ A++
Sbjct: 124 AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALD 182
Query: 637 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPS 696
++H MGFIHRD+KPDN+L+D+ GH+KL DFG G
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGT---------CMKMNKEGMV--------- 224
Query: 697 EEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG----YT 752
+ VGTP+YI+PEVL G Y
Sbjct: 225 ---------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+ CDWWSVGV LYEMLVG PF A++ T K++N ++ L P + +S E +LI
Sbjct: 252 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAF 311
Query: 813 CTGADKRLGKN-ASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNFDPVDPDKL 870
T + RLG+N E+K H FF N + +R P +P + + +DTSNFD ++ DK
Sbjct: 312 LTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKG 371
Query: 871 RNSDSMLDELSDELKSPFHGF 891
+ + + PF GF
Sbjct: 372 EEETFPIPKAFVGNQLPFVGF 392
Score = 118 bits (298), Expect = 1e-28
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R T +YAMK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQD LY VM
Sbjct: 89 RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 148
Query: 140 DYIPG 144
+Y+PG
Sbjct: 149 EYMPG 153
Score = 75.9 bits (187), Expect = 2e-14
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEY 57
MK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQ D ++ +V MEY
Sbjct: 99 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV------MEY 150
Score = 62.4 bits (152), Expect = 3e-10
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 433 LSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG 492
LS+ + +++ +M + +K IG GAFGEV LVR T +YAMK + K
Sbjct: 51 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE---- 106
Query: 493 EVTLVRKIDTNH 504
++++ D+
Sbjct: 107 ---MIKRSDSAF 115
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 334 bits (858), Expect = e-106
Identities = 125/386 (32%), Positives = 184/386 (47%), Gaps = 90/386 (23%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHL----YVM 589
++K I + G FGEV +V+ + + ++ MK + K ++++ +T V+
Sbjct: 78 ILKVIGR--GAFGEVAVVKLKNADKVFAMKILNKWE-------MLKRAETACFREERDVL 128
Query: 590 KGSPH-------------NNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAV 635
NNLY VMDY GGDL++LL K + E +ARFY+AE+ A+
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+SVH++ ++HRDIKPDNIL+D +GHI+L DFG C +G
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC---------LKLMEDGT--------- 230
Query: 696 SEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-----RTG 750
+ VGTP+YI+PE+L +
Sbjct: 231 ---------------------------------VQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSPEGADLI 809
Y CDWWS+GV +YEML G PF A + ET K++N + P + +S DLI
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLI 317
Query: 810 LQLCTGADKRLGKN-ASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
+L + RLG+N + K HPFFS +D++ +R P+IP + + DTSNFD D D
Sbjct: 318 RRLICSREHRLGQNGIEDFKKHPFFSGIDWDN-IRNCEAPYIPEVSSPTDTSNFDV-DDD 375
Query: 869 KLRNSDSMLDE---LSDELKSPFHGF 891
L+NS++M PF GF
Sbjct: 376 CLKNSETMPPPTHTAFSGHHLPFVGF 401
Score = 117 bits (294), Expect = 5e-28
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
+L + + ++AMK L K ++LKR + A + ERD+L D++W+ L+Y+FQD +NLY VM
Sbjct: 94 KLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVM 153
Query: 140 DYIPG 144
DY G
Sbjct: 154 DYYVG 158
Score = 74.4 bits (183), Expect = 5e-14
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEY 57
MK L K ++LKR + A + ERD+L D++W+ L+Y+FQ D + LV M+Y
Sbjct: 104 MKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV------MDY 155
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 283 bits (726), Expect = 2e-87
Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 91/391 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L R Y +K + K +++K + H+ + +
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKA-------ILKKKEEKHIMSERNV---------- 91
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
L++ + H L + S + LYFV+DYI GG+L L ++ F EP ARFY AE+
Sbjct: 92 -LLKNV--KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI 148
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ +H + ++RD+KP+NIL+D GHI LTDFGL K +
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL---------CK-----------E 188
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
++E + + GTP Y+APEVL + Y
Sbjct: 189 NIEHNS--------------------------------TTSTFCGTPEYLAPEVLHKQPY 216
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ DWW +G +LYEML G PPF + +AE ++N L + ++ L+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLK--PNITNSARHLLEG 272
Query: 812 LCT-GADKRLG--KNASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDP--- 864
L KRLG + E+K+H FFS ++++ + + +TPP P + D +FDP
Sbjct: 273 LLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFT 332
Query: 865 ----VDPDKLRNSDSMLDELSDELKSPFHGF 891
+ ++ E F GF
Sbjct: 333 EEPVPNAIGKAPDSVLVTASVKEAAEAFLGF 363
Score = 152 bits (387), Expect = 2e-40
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 43/181 (23%)
Query: 489 GAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEV 548
G+FG+V L R Y +K + K +++K + H+ + +
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKA-------ILKKKEEKHIMSERNV---------- 91
Query: 549 TLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGD 608
L++ + H +++ + +F T + LYFV+DYI GG+
Sbjct: 92 -LLKNV--KHPFLVGLHF----SF---------QTA----------DKLYFVLDYINGGE 125
Query: 609 LMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
L L ++ F EP ARFY AE+ A+ +H + ++RD+KP+NIL+D GHI LTDFGL
Sbjct: 126 LFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
Query: 669 C 669
C
Sbjct: 186 C 186
Score = 100 bits (250), Expect = 1e-22
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFV 138
R YA+K L+K +LK+ + H+ +ER++L + + ++V L++SFQ D LYFV
Sbjct: 58 RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117
Query: 139 MDYIPG 144
+DYI G
Sbjct: 118 LDYING 123
Score = 59.6 bits (145), Expect = 2e-09
Identities = 14/42 (33%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEA-DNEWVVKLYYSFQ 41
+K L+K +LK+ + H+ +ER++L + + ++V L++SFQ
Sbjct: 68 VKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ 109
Score = 50.7 bits (122), Expect = 1e-06
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
++ N S F +K IG G+FG+V L R YA+K + K
Sbjct: 21 PSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQK 73
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 281 bits (721), Expect = 2e-87
Identities = 110/393 (27%), Positives = 167/393 (42%), Gaps = 94/393 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G FG+V LVR+ T Y MK + K V ++ K + H + +
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEV-------IIAKDEVAHTVTESRVLQ-------- 60
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
+T H L +K + H+ L FVM+Y GG+L L ++ +F E ARFY AE+
Sbjct: 61 ------NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEI 114
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+E +H ++RDIK +N+++D+DGHIK+TDFGL K +
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL---------CK-----------E 154
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+ + GTP Y+APEVL Y
Sbjct: 155 GISDGA--------------------------------TMKTFCGTPEYLAPEVLEDNDY 182
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ DWW +GV++YEM+ G PF ++ E + P LSPE L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRT--LSPEAKSLLAG 238
Query: 812 LCT-GADKRLG---KNASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFD--- 863
L +RLG +A EV H FF +++++ V + L PP P++ + +DT FD
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEF 298
Query: 864 ----PVD-PDKLRNSDSMLDELSDELKSPFHGF 891
P +S +L+ E + F F
Sbjct: 299 TAQSITITPPDRYDSLGLLELDQREEQEMFEDF 331
Score = 99 bits (250), Expect = 7e-23
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R T YAMK LRK ++ +++VAH E +L + ++ L Y+FQ D L FVM
Sbjct: 25 REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84
Query: 140 DYIPG 144
+Y G
Sbjct: 85 EYANG 89
Score = 61.1 bits (149), Expect = 5e-10
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK LRK ++ +++VAH E +L + ++ L Y+FQ
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Score = 49.1 bits (118), Expect = 4e-06
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLY 506
K+ + F +K +G G FG+V LVR+ T YAMK + K V ++ K + H
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-------IIAKDEVAHTV 53
Query: 507 VMKTIYKCV 515
+ +
Sbjct: 54 TESRVLQNT 62
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 279 bits (717), Expect = 8e-87
Identities = 107/365 (29%), Positives = 177/365 (48%), Gaps = 89/365 (24%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRKI 581
KI +++ + K G +G+V VRK+ +T ++ MK + K + +
Sbjct: 12 EKIRPECFELLRVLGK--GGYGKVFQVRKVTGANTGKIFAMKVLKK------AMIVRNAK 63
Query: 582 DTNHL----YVMKGSPH-------------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLA 624
DT H +++ H LY +++Y+ GG+L L ++GIF E A
Sbjct: 64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA 123
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
FY+AE++ A+ +H+ G I+RD+KP+NI+++ GH+KLTDFGL K
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL---------CK----- 169
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPE 744
+S+ + H+ GT Y+APE
Sbjct: 170 ------ESIHDGT--------------------------------VTHTFCGTIEYMAPE 191
Query: 745 VLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPE 804
+L+R+G+ + DWWS+G ++Y+ML G+PPF +T K++ + L++P L+ E
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQE 247
Query: 805 GADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDT 859
DL+ +L A RLG +A EV+AHPFF ++++E+ R + PP P +Q+ D
Sbjct: 248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDV 307
Query: 860 SNFDP 864
S FD
Sbjct: 308 SQFDS 312
Score = 151 bits (384), Expect = 2e-40
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 46/184 (25%)
Query: 489 GAFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVF 545
G +G+V VRK+ +T ++ MK + K + + DT H + I + V
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKK------AMIVRNAKDTAHTKAERNILEEV--- 78
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIP 605
H +++ IY AF T LY +++Y+
Sbjct: 79 -----------KHPFIVDLIY----AF---------QT----------GGKLYLILEYLS 104
Query: 606 GGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTD 665
GG+L L ++GIF E A FY+AE++ A+ +H+ G I+RD+KP+NI+++ GH+KLTD
Sbjct: 105 GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTD 164
Query: 666 FGLC 669
FGLC
Sbjct: 165 FGLC 168
Score = 98.0 bits (245), Expect = 3e-22
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 83 DTNHLYAMKTLRKADVLKR-NQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+T ++AMK L+KA +++ AH KAER+IL E + ++V L Y+FQ LY +++Y
Sbjct: 43 NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102
Query: 142 IPG 144
+ G
Sbjct: 103 LSG 105
Score = 59.9 bits (146), Expect = 1e-09
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKR-NQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+KA +++ AH KAER+IL E + ++V L Y+FQ
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ 91
Score = 47.9 bits (115), Expect = 7e-06
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 436 KESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYK 486
+ K+ F ++ +G G +G+V VRK+ +T ++AMK + K
Sbjct: 2 SSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKK 55
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 278 bits (712), Expect = 9e-86
Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 91/368 (24%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRKI 581
K+ + ++K + G +G+V LVRKI DT LY MK + K + +
Sbjct: 49 EKVGIENFELLKVLGT--GAYGKVFLVRKISGHDTGKLYAMKVLKK------ATIVQKAK 100
Query: 582 DTNH-------LYVMKGSP-----------HNNLYFVMDYIPGGDLMSLLIKKGIFEEPL 623
T H L ++ SP L+ ++DYI GG+L + L ++ F E
Sbjct: 101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHE 160
Query: 624 ARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQS 683
+ Y+ E+ A+E +HK+G I+RDIK +NIL+D +GH+ LTDFGL F +
Sbjct: 161 VQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER---- 216
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAP 743
A+ GT Y+AP
Sbjct: 217 -----------------------------------------------AYDFCGTIEYMAP 229
Query: 744 EVLL--RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW--ESCLHIPAEA 799
+++ +G+ + DWWS+GV++YE+L G+ PF + +Q ++ +S P E
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE- 288
Query: 800 QLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQ 854
+S DLI +L KRLG ++A E+K H FF ++++ + + P P I+
Sbjct: 289 -MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIR 347
Query: 855 NSMDTSNF 862
+ +D SNF
Sbjct: 348 DELDVSNF 355
Score = 97.4 bits (243), Expect = 6e-22
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 83 DTNHLYAMKTLRKADVL-KRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFVMD 140
DT LYAMK L+KA ++ K H + ER +L ++V L+Y+FQ + L+ ++D
Sbjct: 80 DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 139
Query: 141 YIPG 144
YI G
Sbjct: 140 YING 143
Score = 57.7 bits (140), Expect = 8e-09
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MKTLRKADVL-KRNQVAHVKAERDILAEADNE-WVVKLYYSFQ 41
MK L+KA ++ K H + ER +L ++V L+Y+FQ
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ 129
Score = 51.5 bits (124), Expect = 7e-07
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 422 SAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHL 478
+ Q+ + + + + K+ F +K +G GA+G+V LVRKI DT L
Sbjct: 25 GGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKL 84
Query: 479 YAMKTIYK 486
YAMK + K
Sbjct: 85 YAMKVLKK 92
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 276 bits (709), Expect = 1e-85
Identities = 119/357 (33%), Positives = 172/357 (48%), Gaps = 75/357 (21%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYK-CVGAFGEV-TLV- 578
K D + ++K + + G FG+V LV+KI D LY MK + K + V T +
Sbjct: 19 EKADPSQFELLKVLGQ--GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 579 RKI--DTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
R I + NH + + + LY ++D++ GGDL + L K+ +F E +FY+AEL
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 136
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
A++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL SK +S
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL---------SK-----------ES 176
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
++ + A+S GT Y+APEV+ R G+T
Sbjct: 177 IDHEK--------------------------------KAYSFCGTVEYMAPEVVNRRGHT 204
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
Q DWWS GV+++EML G+ PF ET ++ + L +P LSPE L+ L
Sbjct: 205 QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--LGMP--QFLSPEAQSLLRML 260
Query: 813 CT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNFDP 864
RLG E+K H FFS +D+ K R + PP P DT FDP
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDP 317
Score = 153 bits (390), Expect = 2e-41
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 31/179 (17%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKI---DTNHLYVMKTIYKCVGVFGEVTLVRKI 554
K D + ++K + + G+FG+V LV+KI D LY MK + K L +
Sbjct: 19 EKADPSQFELLKVLGQ--GSFGKVFLVKKISGSDARQLYAMKVLKKAT-------LKVR- 68
Query: 555 DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLM 610
D + + I V NH + + + LY ++D++ GGDL
Sbjct: 69 DRVRTKMERDILVEV--------------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF 114
Query: 611 SLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ L K+ +F E +FY+AEL A++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL
Sbjct: 115 TRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 97.2 bits (243), Expect = 4e-22
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
D LYAMK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ + LY ++D++
Sbjct: 50 DARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108
Query: 143 PG 144
G
Sbjct: 109 RG 110
Score = 59.1 bits (144), Expect = 2e-09
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ
Sbjct: 57 MKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQ 96
Score = 48.3 bits (116), Expect = 6e-06
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 438 SNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYK 486
+++++ K D S F +K +G G+FG+V LV+KI D LYAMK + K
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 62
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 276 bits (708), Expect = 3e-85
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 99/404 (24%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
+ +KT+ G+FG V LV+ ++ + Y MK + K +V+
Sbjct: 36 NTAQLDQFDRIKTLGT--GSFGRVMLVKHKESGNHYAMKILDKQK-------VVKLKQIE 86
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLL 613
H K I + V N L ++ S ++NLY VM+Y+ GG++ S L
Sbjct: 87 HTLNEKRILQAV--------------NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 614 IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
+ G F EP ARFY A++ E +H + I+RD+KP+N+LID+ G+I++TDF GF
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDF----GF- 187
Query: 674 WTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHS 733
+K + +
Sbjct: 188 ----AKRVKGR----------------------------------------------TWT 197
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
L GTP +APE++L GY + DWW++GV++YEM G PPF A+ + K+++ + +
Sbjct: 198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--V 255
Query: 794 HIPAEAQLSPEGADLILQLCTGAD--KRLG--KN-ASEVKAHPFFSNVDFEKGV-RTLTP 847
P + S + DL+ L D KR G KN +++K H +F+ D+ R +
Sbjct: 256 RFP--SHFSSDLKDLLRNLLQ-VDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 312
Query: 848 PHIPRIQNSMDTSNFDPVDPDKLRNSDSMLDELSDELKSPFHGF 891
P IP+ + DTSNFD + +++R S ++++ F F
Sbjct: 313 PFIPKFKGPGDTSNFDDYEEEEIRVS------INEKCGKEFTEF 350
Score = 149 bits (379), Expect = 1e-39
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 46/189 (24%)
Query: 481 MKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYK 540
+KT+ G+FG V LV+ ++ + Y MK + K +V+ H K I +
Sbjct: 46 IKTLGT--GSFGRVMLVKHKESGNHYAMKILDKQK-------VVKLKQIEHTLNEKRILQ 96
Query: 541 CVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFV 600
V N + + K +F ++NLY V
Sbjct: 97 AV--------------NFPF----LVKLEFSF-------------------KDNSNLYMV 119
Query: 601 MDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
M+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+N+LID+ G+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 661 IKLTDFGLC 669
I++TDFG
Sbjct: 180 IQVTDFGFA 188
Score = 104 bits (261), Expect = 3e-24
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
+ ++ + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM
Sbjct: 61 KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120
Query: 140 DYIPG 144
+Y+ G
Sbjct: 121 EYVAG 125
Score = 63.5 bits (155), Expect = 1e-10
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Score = 48.8 bits (117), Expect = 4e-06
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 429 MRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ K + + F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 19 LAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 276 bits (708), Expect = 3e-85
Identities = 108/397 (27%), Positives = 158/397 (39%), Gaps = 107/397 (26%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L R +T LY +K + K V +++ D K I
Sbjct: 34 GSFGKVMLARVKETGDLYAVKVLKKDV-------ILQDDDVECTMTEKRILSLA------ 80
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
NH L + + L+FVM+++ GGDLM + K F+E ARFY AE+
Sbjct: 81 -------RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI 133
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ +H G I+RD+K DN+L+D +GH KL DFG+ K +
Sbjct: 134 ISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM---------CK-----------E 173
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+ + GTP+YIAPE+L Y
Sbjct: 174 GICNGV--------------------------------TTATFCGTPDYIAPEILQEMLY 201
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
DWW++GV+LYEML G PF A + ++N E + P L + ++
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE--VVYPTW--LHEDATGILKS 257
Query: 812 LCT-GADKRLG----KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNFD-- 863
T RLG + HPFF +D+ + R + PP PRI++ D SNFD
Sbjct: 258 FMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPD 317
Query: 864 ---------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
P+D L + + F F
Sbjct: 318 FIKEEPVLTPIDEGHLPMIN----------QDEFRNF 344
Score = 150 bits (382), Expect = 5e-40
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 43/181 (23%)
Query: 489 GAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEV 548
G+FG+V L R +T LY +K + K V +++ D K I
Sbjct: 34 GSFGKVMLARVKETGDLYAVKVLKKDV-------ILQDDDVECTMTEKRILSLA------ 80
Query: 549 TLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGD 608
NH ++ + F T + L+FVM+++ GGD
Sbjct: 81 -------RNHPFLTQLFC----CF---------QTP----------DRLFFVMEFVNGGD 110
Query: 609 LMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
LM + K F+E ARFY AE+ A+ +H G I+RD+K DN+L+D +GH KL DFG+
Sbjct: 111 LMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Query: 669 C 669
C
Sbjct: 171 C 171
Score = 96.9 bits (242), Expect = 8e-22
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFV 138
R+ +T LYA+K L+K +L+ + V E+ IL+ A N ++ +L+ FQ D L+FV
Sbjct: 43 RVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102
Query: 139 MDYIPG 144
M+++ G
Sbjct: 103 MEFVNG 108
Score = 58.4 bits (142), Expect = 5e-09
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQ 41
+K L+K +L+ + V E+ IL+ A N ++ +L+ FQ
Sbjct: 53 VKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ 94
Score = 49.5 bits (119), Expect = 3e-06
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 434 SQKESNYIRLKRA-KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG 492
S KE N I + + ++ F I+ +G G+FG+V L R +T LYA+K + K V
Sbjct: 5 SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV---- 60
Query: 493 EVTLVRKIDTNHLYVMKTI 511
+++ D K I
Sbjct: 61 ---ILQDDDVECTMTEKRI 76
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 275 bits (705), Expect = 2e-84
Identities = 87/364 (23%), Positives = 148/364 (40%), Gaps = 94/364 (25%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN 584
++ +H +++ I K G FG+V +V+K DT +Y MK + K V + +
Sbjct: 10 EDVNFDHFEILRAIGK--GSFGKVCIVQKNDTKKMYAMKYMNKQK-------CVERNEVR 60
Query: 585 H----LYVMKGSPH-------------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFY 627
+ L +M+G H +++ V+D + GGDL L + F+E + +
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
I EL A++ + IHRD+KPDNIL+D GH+ +TDF +
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA----------------- 163
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL 747
+ T ++ GT Y+APE+
Sbjct: 164 ----------MLPRETQ--------------------------ITTMAGTKPYMAPEMFS 187
Query: 748 R---TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQ--YKVINWESCLHIPAEAQLS 802
GY+ DWWS+GV YE+L G P+ +S ++ + P + S
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYP--SAWS 244
Query: 803 PEGADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTS 860
E L+ +L D+R S+V+ P+ ++++++ + L P IP +
Sbjct: 245 QEMVSLLKKLLEPNPDQRFS-QLSDVQNFPYMNDINWDAVFQKRLIPGFIP----NKGRL 299
Query: 861 NFDP 864
N DP
Sbjct: 300 NCDP 303
Score = 103 bits (260), Expect = 6e-24
Identities = 23/65 (35%), Positives = 43/65 (66%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
+ DT +YAMK + K ++RN+V +V E I+ ++ ++V L+YSFQD+++++ V+
Sbjct: 35 QKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94
Query: 140 DYIPG 144
D + G
Sbjct: 95 DLLLG 99
Score = 63.1 bits (154), Expect = 2e-10
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK + K ++RN+V +V E I+ ++ ++V L+YSFQ
Sbjct: 45 MKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85
Score = 51.9 bits (125), Expect = 5e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ ++ F ++ IG G+FG+V +V+K DT +YAMK + K
Sbjct: 8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNK 50
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 273 bits (700), Expect = 4e-84
Identities = 108/405 (26%), Positives = 173/405 (42%), Gaps = 114/405 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G++ +V LVR T+ +Y MK + K + + D + + K +++
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKEL-------VNDDEDIDWVQTEKHVFEQA------ 66
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
+NH L + + L+FV++Y+ GGDLM + ++ E ARFY AE+
Sbjct: 67 -------SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 119
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ +H+ G I+RD+K DN+L+D +GHIKLTD+G+ K +
Sbjct: 120 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM---------CK-----------E 159
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+ P + + GTPNYIAPE+L Y
Sbjct: 160 GLRPGD--------------------------------TTSTFCGTPNYIAPEILRGEDY 187
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQY--------KVINWESCLHIPAEAQLSP 803
DWW++GV+++EM+ G PF S++ +VI E + IP LS
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIPRS--LSV 244
Query: 804 EGADLILQLCT-GADKRLGKN----ASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSM 857
+ A ++ +RLG + ++++ HPFF NVD++ + + PP P I
Sbjct: 245 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEF 304
Query: 858 DTSNFD-----------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
NFD P D D +R D +S F GF
Sbjct: 305 GLDNFDSQFTNEPVQLTPDDDDIVRKID----------QSEFEGF 339
Score = 150 bits (381), Expect = 5e-40
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 43/181 (23%)
Query: 489 GAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEV 548
G++ +V LVR T+ +Y MK + K + + D + + K +++
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKEL-------VNDDEDIDWVQTEKHVFEQA------ 66
Query: 549 TLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGD 608
+NH +++ F T + L+FV++Y+ GGD
Sbjct: 67 -------SNHPFLVGLHS----CF---------QTE----------SRLFFVIEYVNGGD 96
Query: 609 LMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
LM + ++ E ARFY AE++ A+ +H+ G I+RD+K DN+L+D +GHIKLTD+G+
Sbjct: 97 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Query: 669 C 669
C
Sbjct: 157 C 157
Score = 97.3 bits (243), Expect = 7e-22
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFV 138
RL T+ +YAMK ++K V + V+ E+ + +A N +V L+ FQ + L+FV
Sbjct: 29 RLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88
Query: 139 MDYIPG 144
++Y+ G
Sbjct: 89 IEYVNG 94
Score = 57.6 bits (140), Expect = 7e-09
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQ 41
MK ++K V + V+ E+ + +A N +V L+ FQ
Sbjct: 39 MKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ 80
Score = 49.2 bits (118), Expect = 3e-06
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTI 511
F ++ IG G++ +V LVR T+ +YAMK + K + + D + + K +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL-------VNDDEDIDWVQTEKHV 62
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 268 bits (688), Expect = 6e-83
Identities = 93/363 (25%), Positives = 149/363 (41%), Gaps = 87/363 (23%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
RK K + + G+F V L R++ T+ Y +K + K ++++
Sbjct: 25 RKKRPEDFKFGKILGE--GSFSTVVLARELATSREYAIKILEKRH-------IIKENKVP 75
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYV--MKGS--PHNNLYFVMDYIPGGDLMSLL 613
++ + + + +H + + + LYF + Y G+L+ +
Sbjct: 76 YVTRERDVMSRL--------------DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 614 IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
K G F+E RFY AE+ A+E +H G IHRD+KP+NIL++ D HI++TDFG
Sbjct: 122 RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA---- 177
Query: 674 WTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHS 733
K R A+S
Sbjct: 178 -----KVLSPESKQAR-----------------------------------------ANS 191
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
VGT Y++PE+L + D W++G I+Y+++ G PPF A K+I E
Sbjct: 192 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y 249
Query: 794 HIPAEAQLSPEGADLILQLCTG-ADKRLGKN----ASEVKAHPFFSNVDFEKGVRTLTPP 848
P + P+ DL+ +L A KRLG +KAHPFF +V +E + TPP
Sbjct: 250 DFPEK--FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN-LHQQTPP 306
Query: 849 HIP 851
+
Sbjct: 307 KLT 309
Score = 108 bits (272), Expect = 6e-26
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY++FQD + LYF +
Sbjct: 50 RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 109
Query: 140 DYIPG 144
Y
Sbjct: 110 SYAKN 114
Score = 65.7 bits (161), Expect = 1e-11
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Score = 51.1 bits (123), Expect = 7e-07
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ + K F K +G G+F V L R++ T+ YA+K + K
Sbjct: 13 GSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEK 65
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 269 bits (691), Expect = 3e-82
Identities = 107/405 (26%), Positives = 173/405 (42%), Gaps = 114/405 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G++ +V LVR T+ +Y M+ + K + + D + + K +++
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKEL-------VNDDEDIDWVQTEKHVFEQA------ 109
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
+NH L + + L+FV++Y+ GGDLM + ++ E ARFY AE+
Sbjct: 110 -------SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEI 162
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ +H+ G I+RD+K DN+L+D +GHIKLTD+G+ K +
Sbjct: 163 SLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM---------CK-----------E 202
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+ P + + GTPNYIAPE+L Y
Sbjct: 203 GLRPGD--------------------------------TTSTFCGTPNYIAPEILRGEDY 230
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQY--------KVINWESCLHIPAEAQLSP 803
DWW++GV+++EM+ G PF S++ +VI E + IP LS
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIPRS--LSV 287
Query: 804 EGADLILQLCT-GADKRLGKN----ASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSM 857
+ A ++ +RLG + ++++ HPFF NVD++ + + PP P I
Sbjct: 288 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEF 347
Query: 858 DTSNFD-----------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
NFD P D D +R D +S F GF
Sbjct: 348 GLDNFDSQFTNEPVQLTPDDDDIVRKID----------QSEFEGF 382
Score = 149 bits (378), Expect = 3e-39
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 43/181 (23%)
Query: 489 GAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEV 548
G++ +V LVR T+ +Y M+ + K + + D + + K +++
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKEL-------VNDDEDIDWVQTEKHVFEQA------ 109
Query: 549 TLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGD 608
+NH +++ F T + L+FV++Y+ GGD
Sbjct: 110 -------SNHPFLVGLHS----CF---------QTE----------SRLFFVIEYVNGGD 139
Query: 609 LMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
LM + ++ E ARFY AE++ A+ +H+ G I+RD+K DN+L+D +GHIKLTD+G+
Sbjct: 140 LMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Query: 669 C 669
C
Sbjct: 200 C 200
Score = 96.3 bits (240), Expect = 2e-21
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFV 138
RL T+ +YAM+ ++K V + V+ E+ + +A N +V L+ FQ + L+FV
Sbjct: 72 RLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131
Query: 139 MDYIPG 144
++Y+ G
Sbjct: 132 IEYVNG 137
Score = 57.4 bits (139), Expect = 1e-08
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQ 41
M+ ++K V + V+ E+ + +A N +V L+ FQ
Sbjct: 82 MRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ 123
Score = 48.9 bits (117), Expect = 5e-06
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTI 511
F ++ IG G++ +V LVR T+ +YAM+ + K + + D + + K +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL-------VNDDEDIDWVQTEKHV 105
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 260 bits (666), Expect = 1e-75
Identities = 101/410 (24%), Positives = 162/410 (39%), Gaps = 100/410 (24%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
+ N V + I + G FGEV RK DT +Y MK + K + K
Sbjct: 184 IHLTMNDFSVHRIIGR--GGFGEVYGCRKADTGKMYAMKCLDKKR-------IKMKQGET 234
Query: 558 HLYVMKTIYKCVGAFGE---VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLI 614
+ + V V + T L F++D + GGDL L
Sbjct: 235 LALNERIMLSLVSTGDCPFIVCMSYAFHTPD----------KLSFILDLMNGGDLHYHLS 284
Query: 615 KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 674
+ G+F E RFY AE+ +E +H ++RD+KP NIL+D GH++++D GL
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----- 339
Query: 675 THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSL 734
++S+ P H+
Sbjct: 340 ----------------------CDFSKKKP---------------------------HAS 350
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQ--YKVINWES 791
VGT Y+APEVL + Y DW+S+G +L+++L G PF + + + ++
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTM 409
Query: 792 CLHIPAEAQLSPEGADLILQL-CTGADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLT 846
+ +P SPE L+ L ++RLG + A EVK PFF ++D++ ++
Sbjct: 410 AVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 847 PPHIPRIQ-----NSMDTSNFDPVDPDKLRNSDSMLDELSDELKSPFHGF 891
PP IP ++ D +FD D ++ DS + + F
Sbjct: 468 PPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL--------YRNF 509
Score = 94.2 bits (234), Expect = 6e-20
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW---VVKLYYSFQDKDNLY 136
R DT +YAMK L K + + ER +L+ +V + Y+F D L
Sbjct: 209 RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 137 FVMDYIPG 144
F++D + G
Sbjct: 269 FILDLMNG 276
Score = 56.0 bits (135), Expect = 4e-08
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEW---VVKLYYSFQ 41
MK L K + + ER +L+ +V + Y+F
Sbjct: 219 MKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH 262
Score = 55.7 bits (134), Expect = 6e-08
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 11/129 (8%)
Query: 369 EKEDERRECKVKNY-------SPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKIGL 421
E E+ER C + + F + IE+V ++ + + +I
Sbjct: 96 ETEEERLVCSREIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQ 155
Query: 422 SAEAQCQMRKMLSQKESNYIRLK----RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNH 477
+ + + S K + + + K + + F + IG G FGEV RK DT
Sbjct: 156 NLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGK 215
Query: 478 LYAMKTIYK 486
+YAMK + K
Sbjct: 216 MYAMKCLDK 224
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 256 bits (656), Expect = 2e-75
Identities = 86/400 (21%), Positives = 150/400 (37%), Gaps = 101/400 (25%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
+ + + + + + G FGEV + T LY K + K L ++
Sbjct: 180 QPMGEDWFLDFRVLGR--GGFGEVFACQMKATGKLYACKKLNKKR-------LKKRKGYQ 230
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYV--MKGSPHNN--LYFVMDYIPGGDLM--- 610
V K I V + ++ + + L VM + GGD+
Sbjct: 231 GAMVEKKILAKV--------------HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHI 276
Query: 611 -SLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
++ F+EP A FY A++ +E +H+ I+RD+KP+N+L+D DG+++++D GL
Sbjct: 277 YNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
Query: 670 TGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRC 729
++ +
Sbjct: 337 ---------VELKAGQT-------------------------------------KTKGYA 350
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLA----NTSAETQYK 785
GTP ++APE+LL Y D++++GV LYEM+ PF A + E + +
Sbjct: 351 ------GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 786 VINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK- 840
V+ + P + SP D L +KRLG + ++ HP F ++ + +
Sbjct: 405 VLEQA--VTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 841 GVRTLTPPHIPRIQ-----NSMDTSNFDPVDPDKLRNSDS 875
LTPP +P + N D F V +D+
Sbjct: 461 EAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADT 500
Score = 97.2 bits (242), Expect = 5e-21
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
++ T LYA K L K + KR E+ ILA+ + ++V L Y+F+ K +L VM
Sbjct: 205 QMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264
Query: 140 DYIPG 144
+ G
Sbjct: 265 TIMNG 269
Score = 59.0 bits (143), Expect = 4e-09
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
K L K + KR E+ ILA+ + ++V L Y+F+
Sbjct: 215 CKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Score = 51.3 bits (123), Expect = 1e-06
Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 6/122 (4%)
Query: 371 EDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLE--TEMAKIGLSAEAQCQ 428
+D R K + + + + R + + L+ Q
Sbjct: 99 DDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAP 158
Query: 429 MRKML-SQKESNYIR---LKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
++ L S +++ L+ M + F+ + +G G FGEV + T LYA K +
Sbjct: 159 FQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKL 218
Query: 485 YK 486
K
Sbjct: 219 NK 220
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 213 bits (545), Expect = 6e-63
Identities = 82/326 (25%), Positives = 129/326 (39%), Gaps = 80/326 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFGEVT-LVRKIDT----NH-----LY-VMK 590
G FG V L R+ + +K ++K + G L R+I+ H +Y
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+Y ++++ P G+L L K G F+E + ++ EL A+ H+ IHRDIKP
Sbjct: 85 DR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+N+L+ G +K+ DFG
Sbjct: 143 ENLLMGYKGELKIADFGW------------------------------------------ 160
Query: 711 INSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
S P RR ++ GT +Y+ PE++ + + D W GV+ YE LVG
Sbjct: 161 --SVHAPSLRR----------RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKA 829
PPF + + ET +++N + L P LS DLI + L +RL V
Sbjct: 209 MPPFDSPSHTETHRRIVNVD--LKFP--PFLSDGSKDLISKLLRYHPPQRLP--LKGVME 262
Query: 830 HPFFSNVDFEKGVRTLTPPHIPRIQN 855
HP+ + R + PP Q+
Sbjct: 263 HPW-----VKANSRRVLPPVYQSTQS 283
Score = 74.6 bits (184), Expect = 1e-14
Identities = 13/65 (20%), Positives = 32/65 (49%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R + A+K L K+ + K ++ E +I + + ++++Y F D+ +Y ++
Sbjct: 34 REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93
Query: 140 DYIPG 144
++ P
Sbjct: 94 EFAPR 98
Score = 46.1 bits (110), Expect = 2e-05
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 442 RLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ + K F +P+G G FG V L R+ + A+K ++K
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK 49
Score = 43.4 bits (103), Expect = 2e-04
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEYA 58
+K L K+ + K ++ E +I + + ++++Y F I L+ +E+A
Sbjct: 44 LKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM------LEFA 96
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 204 bits (521), Expect = 8e-60
Identities = 80/306 (26%), Positives = 123/306 (40%), Gaps = 75/306 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFGEVT-LVRKIDT----NH-----LY-VMK 590
G FG V L R+ + + +K ++K + G L R+++ H LY
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+ +Y +++Y P G + L K F+E YI EL A+ H IHRDIKP
Sbjct: 80 DA--TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+N+L+ G +K+ DFG S + S+ R+ + C
Sbjct: 138 ENLLLGSAGELKIADFGW---------SVHAPSS----RRTDL--------------C-- 168
Query: 711 INSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
GT +Y+ PE++ + + D WS+GV+ YE LVG
Sbjct: 169 -------------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKA 829
PPF ANT ET ++ E P ++ DLI + L +R EV
Sbjct: 204 KPPFEANTYQETYKRISRVE--FTFP--DFVTEGARDLISRLLKHNPSQRPM--LREVLE 257
Query: 830 HPFFSN 835
HP+ +
Sbjct: 258 HPWITA 263
Score = 73.0 bits (180), Expect = 3e-14
Identities = 16/68 (23%), Positives = 33/68 (48%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R + + A+K L KA + K ++ E +I + + +++LY F D +Y ++
Sbjct: 29 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88
Query: 140 DYIPGEKL 147
+Y P +
Sbjct: 89 EYAPLGTV 96
Score = 45.3 bits (108), Expect = 5e-05
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
K+ + F +P+G G FG V L R+ + + A+K ++K
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 44
Score = 42.6 bits (101), Expect = 4e-04
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEYA 58
+K L KA + K ++ E +I + + +++LY F + L+ +EYA
Sbjct: 39 LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI------LEYA 91
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 200 bits (510), Expect = 6e-58
Identities = 71/325 (21%), Positives = 114/325 (35%), Gaps = 61/325 (18%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVG----VFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
GAFG+V R + Y +K I + EV L+ + NH YV++ Y A
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--NHQYVVR--YY--AA 70
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIF-EEPLARFYIAE 630
+ E K T L+ M+Y G L L+ + + + +
Sbjct: 71 WLERRNFVKPMTAVKKKST------LFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
+ A+ +H G IHRD+KP NI ID ++K+ DFGL + + S G
Sbjct: 125 ILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
D++ S +GT Y+A EVL TG
Sbjct: 185 DNL--------------------------------------TSAIGTAMYVATEVLDGTG 206
Query: 751 -YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLI 809
Y + D +S+G+I +EM+ P K+ + + +I
Sbjct: 207 HYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKII 264
Query: 810 LQ-LCTGADKRLGKNASEVKAHPFF 833
+ +KR A + +
Sbjct: 265 RLLIDHDPNKRP--GARTLLNSGWL 287
Score = 52.3 bits (126), Expect = 3e-07
Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 17/76 (22%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN------- 134
+ YA+K +R +++ + +E +LA ++++VV+ Y ++ ++ N
Sbjct: 28 ALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83
Query: 135 ------LYFVMDYIPG 144
L+ M+Y
Sbjct: 84 VKKKSTLFIQMEYCEN 99
Score = 32.7 bits (75), Expect = 0.54
Identities = 11/66 (16%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNT------ 54
+K +R +++ + +E +LA ++++VV+ Y ++ + +
Sbjct: 36 IKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLF 91
Query: 55 --MEYA 58
MEY
Sbjct: 92 IQMEYC 97
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 189 bits (483), Expect = 1e-53
Identities = 67/445 (15%), Positives = 124/445 (27%), Gaps = 148/445 (33%)
Query: 428 QMRKMLSQKESNYIRLKRAKMDKSMFIK----IKPIGVGAFGEVTLVRKIDTNHLYAMKT 483
M+ +LS SN I L + +K +I I+ + G F ++ L K N YA+K
Sbjct: 5 SMKDILSNY-SNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKK 61
Query: 484 IYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVG 543
K ++ + K ++ ++ I
Sbjct: 62 YEK-----------SLLEKKRDFTKSNNDKISIKSKYDDFKNELQ-----IITDI----- 100
Query: 544 VFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDY 603
+ Y + + I + +Y + +Y
Sbjct: 101 -------------KNEYCLT-CE-------GI-----ITNY----------DEVYIIYEY 124
Query: 604 IPGGDLMSLLIKKGI--------FEEPLARFYIAELTCAVESVH-KMGFIHRDIKPDNIL 654
+ ++ + + + I + + +H + HRD+KP NIL
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+D++G +KL+DFG S+Y
Sbjct: 185 MDKNGRVKLSDFGE---------SEYMVDK------------------------------ 205
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGSP 772
GT ++ PE D WS+G+ LY M
Sbjct: 206 ---------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
Query: 773 PFLANTSAETQYKVI----------------NWESCLHIPAEAQLSPEGADLILQ-LCTG 815
PF S + I + + LS E D + L
Sbjct: 251 PFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN 310
Query: 816 ADKRLGKNASEVKAHPFFSNVDFEK 840
+R+ + + H + ++ + E
Sbjct: 311 PAERIT--SEDALKHEWLADTNIED 333
Score = 60.9 bits (148), Expect = 6e-10
Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 14/79 (17%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAH--------------VKAERDILAEADNEWVVKLYYS 128
N YA+K K+ + K+ K E I+ + NE+ +
Sbjct: 52 KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGI 111
Query: 129 FQDKDNLYFVMDYIPGEKL 147
+ D +Y + +Y+ + +
Sbjct: 112 ITNYDEVYIIYEYMENDSI 130
Score = 30.5 bits (69), Expect = 3.0
Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 23/74 (31%)
Query: 1 MKTLRKADVLKRNQVAH--------------VKAERDILAEADNEWVVKLYYSFQ--GDI 44
+K K+ + K+ K E I+ + NE+ + ++
Sbjct: 59 LKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEV 118
Query: 45 FILVGLWVNTMEYA 58
+I+ EY
Sbjct: 119 YII-------YEYM 125
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 185 bits (473), Expect = 1e-52
Identities = 58/304 (19%), Positives = 87/304 (28%), Gaps = 76/304 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYV--MKGS- 592
G +GEV VR + LY +K EV K+ H ++ +
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV-GQHPCCVRLEQAW 126
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
LY + G L G E Y+ + A+ +H G +H D+KP
Sbjct: 127 EEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKP 185
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
NI + G KL DFGL
Sbjct: 186 ANIFLGPRGRCKLGDFGLLV--ELGTAGA------------------------------- 212
Query: 711 INSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
G P Y+APE+ L+ Y D +S+G+ + E+
Sbjct: 213 --------------------GEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEVACN 251
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKA 829
E ++ A LS E +++ L R A + A
Sbjct: 252 MELP---HGGEGWQQLRQGYLPPEFT--AGLSSELRSVLVMMLEPDPKLRAT--AEALLA 304
Query: 830 HPFF 833
P
Sbjct: 305 LPVL 308
Score = 59.6 bits (145), Expect = 1e-09
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDY 141
+ LYA+K +++ A AE + + V+L ++++ LY +
Sbjct: 80 EDGRLYAVKRSMSPFRGPKDR-ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL 138
Query: 142 IPGE 145
Sbjct: 139 CGPS 142
Score = 50.4 bits (121), Expect = 1e-06
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 21/108 (19%)
Query: 436 KESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK-------CV 488
+ Y + + F ++ +G G++GEV VR + LYA+K
Sbjct: 42 QSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRA 101
Query: 489 GAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLY-VM 535
EV K+ H ++ + A+ + LY
Sbjct: 102 RKLAEVGSHEKV-GQHPCCVR--LE--QAW--------EEGGILYLQT 136
Score = 34.6 bits (80), Expect = 0.11
Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 9/60 (15%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQ-GDIFILVGLWVNTMEYA 58
+K +++ A AE + + V+L +++ G I L E
Sbjct: 87 VKRSMSPFRGPKDR-ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ------TELC 139
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 184 bits (469), Expect = 9e-52
Identities = 73/347 (21%), Positives = 125/347 (36%), Gaps = 78/347 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-------VGAFGEVTLVRKIDTNHLYV--MKGS- 592
G FG+ LV+ + YV+K I + EV ++ + H + + S
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM--KHPNIVQYRESF 92
Query: 593 -PHNNLYFVMDYIPGGDLMSLL--IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ +LY VMDY GGDL + K +F+E + ++ A++ VH +HRDIK
Sbjct: 93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIK 152
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
NI + +DG ++L DFG+ ++ S +
Sbjct: 153 SQNIFLTKDGTVQLGDFGI---------ARVLNSTVE----------------------- 180
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
LA + +GTP Y++PE+ Y D W++G +LYE+
Sbjct: 181 --------------------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
Query: 770 GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVK 828
F A + K+I+ P S + L+ Q R + + +
Sbjct: 221 LKHAFEAGSMKNLVLKIIS---GSFPPVSLHYSYDLRSLVSQLFKRNPRDRP--SVNSIL 275
Query: 829 AHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNSDS 875
F K + P + + + T + P + S
Sbjct: 276 EKGF-----IAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPAS 317
Score = 51.6 bits (124), Expect = 6e-07
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ Y +K + + + + + E +LA + +V+ SF++ +LY VMDY
Sbjct: 46 TEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104
Query: 142 IPG 144
G
Sbjct: 105 CEG 107
Score = 49.7 bits (119), Expect = 2e-06
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 24/110 (21%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC------ 487
S + L M+K +++++ IG G+FG+ LV+ + Y +K I
Sbjct: 9 SGVDLGTENLYFQSMEK--YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE 66
Query: 488 -VGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLY-VM 535
+ EV ++ + H I + +F + LY VM
Sbjct: 67 REESRREVAVLANM--KHPN----IVQYRESF--------EENGSLYIVM 102
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 179 bits (455), Expect = 5e-50
Identities = 81/341 (23%), Positives = 135/341 (39%), Gaps = 80/341 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT--------NH-----LY-V 588
G F + + DT ++ K + K + K+ H +
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVPK--SLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 589 MKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+ + + ++ V++ L+ L ++ EP AR+Y+ ++ + +H+ IHRD+
Sbjct: 110 FEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K N+ ++ D +K+ DFGL T
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLAT-------------------------------------- 189
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
+E R+ C GTPNYIAPEVL + G++ D WS+G I+Y +L
Sbjct: 190 --------KVEYDGERKKVLC------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 235
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEV 827
VG PPF + ET ++ E IP ++P A LI + L T R +E+
Sbjct: 236 VGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQKMLQTDPTARP--TINEL 289
Query: 828 KAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
FF++ + + LT PP +S+D SN P+
Sbjct: 290 LNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 330
Score = 55.8 bits (135), Expect = 3e-08
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 78 EIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 137
EI DT ++A K + K+ +LK +Q + E I ++ VV + F+D D ++
Sbjct: 59 EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118
Query: 138 VMDYIPG 144
V++
Sbjct: 119 VLELCRR 125
Score = 38.8 bits (91), Expect = 0.006
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+++ + +G G F + + DT ++A K + K
Sbjct: 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPK 76
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 177 bits (451), Expect = 5e-50
Identities = 72/306 (23%), Positives = 119/306 (38%), Gaps = 77/306 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT--------NH-----LY-V 588
G F + + DT ++ K + K + K+ H +
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPK--SLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 589 MKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+ + + ++ V++ L+ L ++ EP AR+Y+ ++ + +H+ IHRD+
Sbjct: 84 FEDN--DFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K N+ ++ D +K+ DFGL T
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLAT-------------------------------------- 163
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
+E R+ C GTPNYIAPEVL + G++ D WS+G I+Y +L
Sbjct: 164 --------KVEYDGERKKVLC------GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 209
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEV 827
VG PPF + ET ++ E IP ++P A LI + L T R +E+
Sbjct: 210 VGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQKMLQTDPTARP--TINEL 263
Query: 828 KAHPFF 833
FF
Sbjct: 264 LNDEFF 269
Score = 55.7 bits (135), Expect = 2e-08
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 78 EIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 137
EI DT ++A K + K+ +LK +Q + E I ++ VV + F+D D ++
Sbjct: 33 EISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92
Query: 138 VMDYIPG 144
V++
Sbjct: 93 VLELCRR 99
Score = 39.1 bits (92), Expect = 0.004
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+++ + +G G F + + DT ++A K + K
Sbjct: 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPK 50
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 175 bits (445), Expect = 2e-49
Identities = 79/307 (25%), Positives = 123/307 (40%), Gaps = 78/307 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT--------NH-----LY-V 588
G F V I T +K I K A + +V+++ H LY
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDK--KAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 589 MKGSPHNNLYFVMDYIPGGDLMSLLIKK-GIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ S N +Y V++ G++ L + F E AR ++ ++ + +H G +HRD
Sbjct: 80 FEDS--NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRD 137
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+ N+L+ R+ +IK+ DFGL T +
Sbjct: 138 LTLSNLLLTRNMNIKIADFGLAT----------------QLKMPH--------------- 166
Query: 708 CRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
E+ ++L GTPNYI+PE+ R+ + D WS+G + Y +
Sbjct: 167 -----------EKH----------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASE 826
L+G PPF +T T KV+ + +P+ LS E DLI Q L RL + S
Sbjct: 206 LIGRPPFDTDTVKNTLNKVVLAD--YEMPSF--LSIEAKDLIHQLLRRNPADRL--SLSS 259
Query: 827 VKAHPFF 833
V HPF
Sbjct: 260 VLDHPFM 266
Score = 53.3 bits (129), Expect = 1e-07
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 78 EIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYF 137
I T A+K + K + K V V+ E I + + +++LY F+D + +Y
Sbjct: 29 RAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88
Query: 138 VMDYIPG 144
V++
Sbjct: 89 VLEMCHN 95
Score = 40.6 bits (96), Expect = 0.002
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +G G+F V I T A+K I K
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK 46
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 176 bits (448), Expect = 3e-49
Identities = 64/315 (20%), Positives = 108/315 (34%), Gaps = 81/315 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVMK--GS- 592
G +V V + +Y +K + E+ + K+ + +++
Sbjct: 39 GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP
Sbjct: 98 ITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA 156
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N LI DG +KL DFG+ + Q +
Sbjct: 157 NFLIV-DGMLKLIDFGI---------ANQMQPDTTS------------------------ 182
Query: 712 NSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-----------CDWWSV 760
+ S VGT NY+ PE + ++ D WS+
Sbjct: 183 -----------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225
Query: 761 GVILYEMLVGSPPFLANT-SAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADK 818
G ILY M G PF + +I+ + P + D++ L +
Sbjct: 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQ 283
Query: 819 RLGKNASEVKAHPFF 833
R+ + E+ AHP+
Sbjct: 284 RI--SIPELLAHPYV 296
Score = 48.8 bits (117), Expect = 4e-06
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD--NEWVVKLYYSFQDKDNLYFVMD 140
+ +YA+K + + + + E L + ++ +++LY +Y VM+
Sbjct: 50 EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 108
Query: 141 YIPGE 145
+
Sbjct: 109 CGNID 113
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 175 bits (446), Expect = 9e-49
Identities = 68/335 (20%), Positives = 117/335 (34%), Gaps = 86/335 (25%)
Query: 530 NHLYVMKTIY---KCVGV--FGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTL 577
+ V IY K +G +V V + +Y +K + E+
Sbjct: 2 ECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAY 60
Query: 578 VRKIDTNHLYVMK--GS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+ K+ + +++ +Y VM+ DL S L KK + + Y +
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLE 119
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
AV ++H+ G +H D+KP N LI DG +KL DFG+ + Q +
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI---------ANQMQPDTTS------ 163
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
+ S VGT NY+ PE + ++
Sbjct: 164 -----------------------------------VVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 754 L-----------CDWWSVGVILYEMLVGSPPFLANTSAETQ-YKVINWESCLHIPAEAQL 801
D WS+G ILY M G PF + ++ + +I+ + P
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIP 246
Query: 802 SPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSN 835
+ D++ L +R+ + E+ AHP+
Sbjct: 247 EKDLQDVLKCCLKRDPKQRI--SIPELLAHPYVQI 279
Score = 47.8 bits (114), Expect = 8e-06
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD--NEWVVKLYYSFQDKDNLYFVMD 140
+ +YA+K + + + + E L + ++ +++LY +Y VM+
Sbjct: 31 EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89
Query: 141 YIPGE 145
+
Sbjct: 90 CGNID 94
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 172 bits (438), Expect = 2e-48
Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 78/333 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTI-YKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G FG+V + YV+K + Y EV + K+ +H+ ++ Y G +
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKL--DHVNIVH--YN--GCWDG 75
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKK--GIFEEPLARFYIAELT 632
+ + + K L+ M++ G L + K+ ++ LA ++T
Sbjct: 76 FDYDPETSSKNSSRSKT---KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
V+ +H I+RD+KP NI + +K+ DFGL +++G
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL---------VTSLKNDGK------ 177
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
GT Y++PE + Y
Sbjct: 178 --------------------------------------RTRSKGTLRYMSPEQISSQDYG 199
Query: 753 QLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D +++G+IL E+L V F + + + L+ +
Sbjct: 200 KEVDLYALGLILAELLHVCDTAFETSK---------FFTDLRDGIISDIFDKKEKTLLQK 250
Query: 812 -LCTGADKRLGKNASEVKAHPFFSNVDFEKGVR 843
L + R N SE+ EK R
Sbjct: 251 LLSKKPEDRP--NTSEILRTLTVWKKSPEKNER 281
Score = 33.4 bits (77), Expect = 0.26
Identities = 10/79 (12%), Positives = 21/79 (26%), Gaps = 23/79 (29%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-------- 133
Y +K ++ + E LA+ D+ +V + D
Sbjct: 33 RIDGKTYVIKRVKYN---NEK----AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85
Query: 134 --------NLYFVMDYIPG 144
L+ M++
Sbjct: 86 NSSRSKTKCLFIQMEFCDK 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 172 bits (438), Expect = 8e-48
Identities = 72/394 (18%), Positives = 126/394 (31%), Gaps = 79/394 (20%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDT----NHLYVM 508
F I+ +G G FG V + + YA+K I ++R++ H ++
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 509 KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC 568
+ + + + L + V
Sbjct: 68 RYFNAWL----------ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDP 117
Query: 569 VGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGI----FEEPLA 624
+ SP LY M +L + + E +
Sbjct: 118 F----------STKNTVGQLQPSSPKVYLYIQMQLCRKENLKDW-MNRRCSLEDREHGVC 166
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++ AVE +H G +HRD+KP NI D +K+ DFGL T +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT-----------AMD 215
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPE 744
D Q + P ++ T VGT Y++PE
Sbjct: 216 QDEEEQTVLTPMPAYATHT-----------------------------GQVGTKLYMSPE 246
Query: 745 VLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSP 803
+ Y+ D +S+G+IL+E+L F +T E + ++I L P Q P
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELLY---SF--STQME-RVRIITDVRNLKFPLLFTQKYP 300
Query: 804 EGADLILQ-LCTGADKRLGKNASEVKAHPFFSNV 836
+ ++ L +R A+++ + F N+
Sbjct: 301 QEHMMVQDMLSPSPTERP--EATDIIENAIFENL 332
Score = 29.1 bits (65), Expect = 6.4
Identities = 9/78 (11%), Positives = 20/78 (25%)
Query: 70 ESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSF 129
+ E E + + ++ + + + + + + V
Sbjct: 71 NAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPS 130
Query: 130 QDKDNLYFVMDYIPGEKL 147
K LY M E L
Sbjct: 131 SPKVYLYIQMQLCRKENL 148
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 176 bits (449), Expect = 8e-48
Identities = 81/330 (24%), Positives = 125/330 (37%), Gaps = 77/330 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FGEV + T Y +K I K + + + + ++K H
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL----REVELLKKLDHPNIMKLFE 88
Query: 595 -----NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
++ Y V + GG+L +IK+ F E A I ++ + +HK +HRD+K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLK 148
Query: 650 PDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
P+NIL+ ++D IK+ DFGL S +Q
Sbjct: 149 PENILLESKEKDCDIKIIDFGL---------STCFQ---------------------QNT 178
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
+ +GT YIAPEVL T Y + CD WS GVILY
Sbjct: 179 KM-----------------------KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYI 214
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNAS 825
+L G+PPF + +V + +P +S + DLI + L R+ A+
Sbjct: 215 LLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI--TAT 272
Query: 826 EVKAHPFFSNVDFEKGVRTLTPPHIPRIQN 855
+ HP+ E + P + N
Sbjct: 273 QCLEHPWIQKYSSETPTISDLPSLESAMTN 302
Score = 53.9 bits (130), Expect = 2e-07
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YA+K + KA K + + E ++L + D+ ++KL+ +D + Y V +
Sbjct: 46 TQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 144 G 144
G
Sbjct: 105 G 105
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 170 bits (433), Expect = 1e-47
Identities = 72/336 (21%), Positives = 114/336 (33%), Gaps = 72/336 (21%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTI------YKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV 569
G FG V + + Y +K I V EV + K+ H +++
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL--EHPGIVR----YF 69
Query: 570 GAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARF 626
A+ E + SP LY M +L + + E +
Sbjct: 70 NAWLE-------KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
++ AVE +H G +HRD+KP NI D +K+ DFGL T + D
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-----------DQD 171
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL 746
Q + P +++ T VGT Y++PE +
Sbjct: 172 EEEQTVLTPMPAYARHT-----------------------------GQVGTKLYMSPEQI 202
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSPEG 805
Y+ D +S+G+IL+E+L P T V N L P Q P
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDVRN----LKFPPLFTQKYPCE 256
Query: 806 ADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEK 840
++ L +R A + + F ++DF
Sbjct: 257 YVMVQDMLSPSPMERP--EAINIIENAVFEDLDFPG 290
Score = 35.4 bits (82), Expect = 0.074
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 18/84 (21%)
Query: 78 EIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAER--DILAEADNEWVVKLYYSFQDKDN- 134
E + + YA+K +R L ++A K R LA+ ++ +V+ + ++ +K+
Sbjct: 23 EAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 135 -----------LYFVMDYIPGEKL 147
LY M E L
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENL 102
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 169 bits (431), Expect = 2e-47
Identities = 71/314 (22%), Positives = 119/314 (37%), Gaps = 82/314 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-------VGAFGEVTLVRKIDTNHLYVMK----- 590
G +G +R+ + V K + EV L+R++ H +++
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL--KHPNIVRYYDRI 74
Query: 591 -GSPHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGF-- 643
+ LY VM+Y GGDL S++ K + +E + +LT A++ H+
Sbjct: 75 IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 134
Query: 644 ---IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
+HRD+KP N+ +D ++KL DFGL ++ +
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGL---------ARILNHDTS-------------- 171
Query: 701 QGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
A + VGTP Y++PE + R Y + D WS+
Sbjct: 172 -----------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 761 GVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKR 819
G +LYE+ PPF A + E K+ IP + S E ++I + L R
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIRE-GKFRRIP--YRYSDELNEIITRMLNLKDYHR 259
Query: 820 LGKNASEVKAHPFF 833
+ E+ +P
Sbjct: 260 P--SVEEILENPLI 271
Score = 49.2 bits (118), Expect = 3e-06
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 9/63 (14%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC-------VGAFGEVTLVR 498
++ + + + IG G++G +R+ + K + EV L+R
Sbjct: 3 SRAED--YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLR 60
Query: 499 KID 501
++
Sbjct: 61 ELK 63
Score = 45.3 bits (108), Expect = 4e-05
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN--LY 136
IR + K L + + + +E ++L E + +V+ Y D+ N LY
Sbjct: 25 IRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83
Query: 137 FVMDYIPG 144
VM+Y G
Sbjct: 84 IVMEYCEG 91
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 175 bits (445), Expect = 4e-47
Identities = 85/332 (25%), Positives = 127/332 (38%), Gaps = 78/332 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G +GEV L R T+ +K I K + + + + V+K H
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL----EEVAVLKLLDHPNIMKLYD 103
Query: 595 -----NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
N Y VM+ GG+L +I + F E A I ++ V +HK +HRD+K
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163
Query: 650 PDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
P+N+L+ ++D IK+ DFGL F E ++
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVF---------------------ENQKKM------- 195
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
+GT YIAPEVL + Y + CD WS+GVIL+
Sbjct: 196 -------------------------KERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFI 229
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNAS 825
+L G PPF T E KV + P +S DLI Q L + +R+ +A
Sbjct: 230 LLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI--SAQ 287
Query: 826 EVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSM 857
+ HP+ K + P + +M
Sbjct: 288 QALEHPWIKE-MCSKKESGIELPSLANAIENM 318
Score = 53.9 bits (130), Expect = 1e-07
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T+ A+K +RK + + + + E +L D+ ++KLY F+DK N Y VM+
Sbjct: 61 THVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK 119
Query: 144 G 144
G
Sbjct: 120 G 120
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 175 bits (445), Expect = 5e-47
Identities = 78/348 (22%), Positives = 127/348 (36%), Gaps = 76/348 (21%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GA+GEV L ++ + + +K I K G + K + E+
Sbjct: 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN---------EI 97
Query: 576 TLVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
+L++ +D H ++K Y V ++ GG+L +I + F+E A + ++
Sbjct: 98 SLLKSLD--HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 632 TCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ +HK +HRDIKP+NIL+ + +IK+ DFGL S ++
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL---------SSFFS------ 200
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR 748
+ +GT YIAPEVL +
Sbjct: 201 ---------------KDYKL-----------------------RDRLGTAYYIAPEVLKK 222
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y + CD WS GVI+Y +L G PPF + KV + +S E +L
Sbjct: 223 -KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKEL 281
Query: 809 ILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQN 855
I L +KR A E + ++ + N
Sbjct: 282 IKLMLTYDYNKRC--TAEEALNSRWIKK-YANNINKSDQKTLCGALSN 326
Score = 48.5 bits (116), Expect = 8e-06
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAH----------VKAERDILAEADNEWVVKLYYSFQDKD 133
+ A+K ++K+ K + E +L D+ ++KL+ F+DK
Sbjct: 60 GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119
Query: 134 NLYFVMDYIPG 144
Y V ++ G
Sbjct: 120 YFYLVTEFYEG 130
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 168 bits (429), Expect = 7e-47
Identities = 81/339 (23%), Positives = 131/339 (38%), Gaps = 71/339 (20%)
Query: 507 VMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIY 566
+ I K G++G V L + N Y MK + K + R
Sbjct: 17 LKDEIGK--GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCI 74
Query: 567 KCVGAFG----EVTLVRKIDTNH---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGI 618
+ G E+ +++K+D + L V+ ++LY V + + G +M +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKP 133
Query: 619 FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNS 678
E ARFY +L +E +H IHRDIKP N+L+ DGHIK+ DFG+ F+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK----- 188
Query: 679 KYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTP 738
D+ L + VGTP
Sbjct: 189 ----------GSDA-------------------------------------LLSNTVGTP 201
Query: 739 NYIAPEVL--LRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHI 795
++APE L R ++ + D W++GV LY + G PF+ K+ + L
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQA--LEF 259
Query: 796 PAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFF 833
P + ++ + DLI + L + R+ E+K HP+
Sbjct: 260 PDQPDIAEDLKDLITRMLDKNPESRI--VVPEIKLHPWV 296
Score = 37.6 bits (88), Expect = 0.013
Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 25/96 (26%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW-------------------- 121
+ N YAMK L K ++++ R
Sbjct: 35 ENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94
Query: 122 ---VVKLY--YSFQDKDNLYFVMDYIPGEKLIPYPS 152
VVKL ++D+LY V + + ++ P+
Sbjct: 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 171 bits (434), Expect = 8e-47
Identities = 49/411 (11%), Positives = 105/411 (25%), Gaps = 122/411 (29%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIY 512
++ +G +T + + Y K + L +++ I
Sbjct: 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 134
Query: 513 KCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAF 572
A + + D V + ++R + + +
Sbjct: 135 NQKQAKVHLRFIFPFDL------------VKDPQKKKMIRVRLDERDMWVLSRF------ 176
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
+ M+ + G L+S ++
Sbjct: 177 ----FL-------YPRMQSNL---------QTFGEVLLSHSSTHKSLVHHARLQLTLQVI 216
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
+ S+H G +H ++P +I++D+ G + LT F +D
Sbjct: 217 RLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL-------------------VRDG 257
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL----- 747
S + + PE+
Sbjct: 258 ARVV---SSVSR----------------------------------GFEPPELEARRATI 280
Query: 748 ------RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
RT T D W++G+++Y + P + + + SC +IP +
Sbjct: 281 SYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF--RSCKNIPQPVR- 337
Query: 802 SPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIP 851
L+ L + RL + P + + +RT +P
Sbjct: 338 -----ALLEGFLRYPKEDRLL--PLQAMETPEY------EQLRTELSAALP 375
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 169 bits (429), Expect = 9e-47
Identities = 65/379 (17%), Positives = 112/379 (29%), Gaps = 128/379 (33%)
Query: 503 NHLYVM-KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYV 561
NHL+++ + + GA V R T L+ +K
Sbjct: 8 NHLWLLSDILGQ--GATANVFRGRHKKTGDLFAIKVFNN-----------ISFLRPVDVQ 54
Query: 562 MKTIYKCVGAFGEVTLVRKIDTNH-----LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIK 615
M+ E +++K+ NH L+ + + + + +M++ P G L ++L +
Sbjct: 55 MR----------EFEVLKKL--NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEE 102
Query: 616 KG---IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGL 668
E + ++ + + + G +HR+IKP NI+ D KLTDFG
Sbjct: 103 PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162
Query: 669 CTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQR 728
++ + +
Sbjct: 163 ---------ARELEDDE------------------------------------------- 170
Query: 729 CLAHSLVGTPNYIAPEVLLRT--------GYTQLCDWWSVGVILYEMLVGSPPFLANTSA 780
SL GT Y+ P++ R Y D WS+GV Y GS PF
Sbjct: 171 -QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
Query: 781 ETQ----YKVIN-----------------WESCLHIPAEAQLSPEGADLILQLCTG---- 815
YK+I + +P LS L+ +
Sbjct: 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289
Query: 816 -ADKRLGKNASEVKAHPFF 833
+K G + A
Sbjct: 290 DQEKCWG--FDQFFAETSD 306
Score = 44.4 bits (105), Expect = 1e-04
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFVM 139
T L+A+K L+ V E ++L + +++ +VKL+ ++ + +M
Sbjct: 31 KKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88
Query: 140 DYIPG 144
++ P
Sbjct: 89 EFCPC 93
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 171 bits (434), Expect = 1e-46
Identities = 63/317 (19%), Positives = 110/317 (34%), Gaps = 81/317 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVMK--GSP 593
G +V V + +Y +K + E+ + K+ + +++
Sbjct: 67 GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125
Query: 594 --HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP
Sbjct: 126 ITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N LI DG +KL DFG+ + Q +
Sbjct: 185 NFLIV-DGMLKLIDFGI---------ANQMQPDTTS------------------------ 210
Query: 712 NSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-----------CDWWSV 760
+ S VG NY+ PE + ++ D WS+
Sbjct: 211 -----------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253
Query: 761 GVILYEMLVGSPPFLANTSAETQ-YKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADK 818
G ILY M G PF + ++ + +I+ + P + D++ L +
Sbjct: 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQ 311
Query: 819 RLGKNASEVKAHPFFSN 835
R+ + E+ AHP+
Sbjct: 312 RI--SIPELLAHPYVQI 326
Score = 46.7 bits (111), Expect = 2e-05
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD--NEWVVKLYYSFQDKDNLYFVMD 140
+ +YA+K + + + + E L + ++ +++LY +Y VM+
Sbjct: 78 EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136
Query: 141 YIPGE 145
+
Sbjct: 137 CGNID 141
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 172 bits (437), Expect = 4e-46
Identities = 78/334 (23%), Positives = 128/334 (38%), Gaps = 82/334 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDTNHLYVMKGSPH------ 594
G FGEV L + T +K I K + +L+R++ ++K H
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ-----LLKQLDHPNIMKL 91
Query: 595 -------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
Y V + GG+L +I + F E A I ++ + +HK +HRD
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 151
Query: 648 IKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
+KP+N+L+ +D +I++ DFGL S +++
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGL---------STHFE---------------------A 181
Query: 705 GQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
++ +GT YIAPEVL T Y + CD WS GVIL
Sbjct: 182 SKKM-----------------------KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
Query: 765 YEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKN 823
Y +L G PPF + KV + +P ++S DLI + L R+ +
Sbjct: 218 YILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI--S 275
Query: 824 ASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSM 857
A + H + + K ++ P + ++
Sbjct: 276 ARDALDHEWIQT--YTKEQISVDVPSLDNAILNI 307
Score = 57.4 bits (139), Expect = 1e-08
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T A+K + K V ++ + E +L + D+ ++KLY F+DK Y V +
Sbjct: 50 TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109
Query: 144 G 144
G
Sbjct: 110 G 110
Score = 30.4 bits (69), Expect = 2.8
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFI-LVGLWVNTMEY 57
+K + K V ++ + E +L + D+ ++KLY F+ + LV E
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV------GEV 107
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 169 bits (428), Expect = 1e-45
Identities = 48/421 (11%), Positives = 104/421 (24%), Gaps = 111/421 (26%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIY 512
++ +G +T + + Y K + L +++ I
Sbjct: 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139
Query: 513 KCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAF 572
A + + D K + + ++ ++ + ++ + + F
Sbjct: 140 NQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVL-----SRFFLYPRMQSNLQTF 194
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
GE L+S ++
Sbjct: 195 GE---------------------------------VLLSHSSTHKSLVHHARLQLTLQVI 221
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
+ S+H G +H ++P +I++D+ G + LT F
Sbjct: 222 RLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL----------------------- 258
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG-- 750
R P A +L
Sbjct: 259 ----------------------------VRDGASAVSPIGRGFAPPETTAERMLPFGQHH 290
Query: 751 ---YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
T D W++G+ +Y + P + + + SC +IP +
Sbjct: 291 PTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF--RSCKNIPQPVR------A 342
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVD 866
L+ + RL + P + + +RT +P Q + +
Sbjct: 343 LLEGFLRYPKEDRLL--PLQAMETPEY------EQLRTELSAALPLYQTDGEPTREGGAP 394
Query: 867 P 867
P
Sbjct: 395 P 395
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 165 bits (420), Expect = 2e-45
Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 27/175 (15%)
Query: 499 KIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNH 558
K +++T+ G+FG V L+R Y MK + K + +VR H
Sbjct: 2 KYSLQDFQILRTLGT--GSFGRVHLIRSRHNGRYYAMKVLKKEI-------VVRLKQVEH 52
Query: 559 LYVMKTIYKCVGAFGEVTLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLI 614
+ + V H + M G+ ++ +MDYI GG+L SLL
Sbjct: 53 TNDERLMLSIV--------------THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR 98
Query: 615 KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
K F P+A+FY AE+ A+E +H I+RD+KP+NIL+D++GHIK+TDFG
Sbjct: 99 KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
Score = 151 bits (384), Expect = 1e-40
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
++L GTP+YIAPEV+ Y + DWWS G+++YEML G PF + + +T K++N E
Sbjct: 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE 219
Query: 791 SCLHIPAEAQLSPEGADLILQLCTGAD--KRLG--KN-ASEVKAHPFFSNVDFEK-GVRT 844
L P + + DL+ +L T D +RLG +N +VK HP+F V +EK R
Sbjct: 220 --LRFP--PFFNEDVKDLLSRLIT-RDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRN 274
Query: 845 LTPPHIPRIQNSM-DTSNFDPVDPDKLRNSDSMLDELSDELKSPFHGF 891
+ P+ P IQ DTS FD + + D +D F F
Sbjct: 275 IETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYADL----FRDF 318
Score = 108 bits (273), Expect = 5e-26
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R YAMK L+K V++ QV H ER +L+ + ++++++ +FQD ++ +M
Sbjct: 26 RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85
Query: 140 DYIPG 144
DYI G
Sbjct: 86 DYIEG 90
Score = 65.6 bits (161), Expect = 1e-11
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K V++ QV H ER +L+ + ++++++ +FQ
Sbjct: 36 MKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Score = 48.7 bits (117), Expect = 4e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
K F ++ +G G+FG V L+R YAMK + K
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK 41
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 163 bits (415), Expect = 3e-45
Identities = 71/326 (21%), Positives = 116/326 (35%), Gaps = 81/326 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAF V T + K I +K+ ++ E
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINT-----------KKLSARDFQKLER---------EA 56
Query: 576 TLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+ RK+ ++ + S + Y V D + GG+L ++ + + E A I ++
Sbjct: 57 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 116
Query: 634 AVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
++ H G +HR++KP+N+L+ + +KL DFGL +
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL---------AIE---------- 157
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
+ SE W GTP Y++PEVL +
Sbjct: 158 --VNDSEAWHG--------------------------------FAGTPGYLSPEVLKKDP 183
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
Y++ D W+ GVILY +LVG PPF ++ P ++PE LI
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 811 Q-LCTGADKRLGKNASEVKAHPFFSN 835
L KR+ A + P+ N
Sbjct: 244 SMLTVNPKKRI--TADQALKVPWICN 267
Score = 49.5 bits (119), Expect = 2e-06
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T +A K + L ++ E I + + +V+L+ S Q++ Y V D
Sbjct: 28 KTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86
Query: 142 IPG 144
+ G
Sbjct: 87 VTG 89
Score = 41.0 bits (97), Expect = 0.001
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G GAF V T +A K I
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINT 41
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 164 bits (418), Expect = 4e-45
Identities = 79/339 (23%), Positives = 130/339 (38%), Gaps = 78/339 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GA GEV L + T +K I K RK E+
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISK-----------RKFAIGSAREADPALNV---ETEI 66
Query: 576 TLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
+++K++ + +K + Y V++ + GG+L ++ +E + Y ++ A
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 635 VESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
V+ +H+ G IHRD+KP+N+L+ + D IK+TDFG SK
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH---------SKI----------- 166
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL---LR 748
+ + L GTP Y+APEVL
Sbjct: 167 -LGETSLMRT--------------------------------LCGTPTYLAPEVLVSVGT 193
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLA-NTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
GY + D WS+GVIL+ L G PPF T + ++ + + A++S + D
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 808 LILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTL 845
L+ + L R E HP+ + D ++ + L
Sbjct: 254 LVKKLLVVDPKARF--TTEEALRHPWLQDEDMKRKFQDL 290
Score = 40.0 bits (94), Expect = 0.003
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 82 IDTNHLYAMKTLRKADVL-----KRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY 136
T A+K + K + + +V+ E +IL + ++ ++K+ F +D Y
Sbjct: 32 RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YY 90
Query: 137 FVMDYIPG 144
V++ + G
Sbjct: 91 IVLELMEG 98
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 164 bits (416), Expect = 4e-45
Identities = 73/325 (22%), Positives = 112/325 (34%), Gaps = 75/325 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI-------YKCVG-AFGEVTLVRKIDTNHLYV--MKGS 592
G F EV + +K + K E+ L++++ NH V S
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL--NHPNVIKYYAS 100
Query: 593 --PHNNLYFVMDYIPGGDLMSLL----IKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
N L V++ GDL ++ +K + E Y +L A+E +H +HR
Sbjct: 101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR 160
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
DIKP N+ I G +KL D GL +++ S
Sbjct: 161 DIKPANVFITATGVVKLGDLGL---------GRFFSSKTT-------------------- 191
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
AHSLVGTP Y++PE + GY D WS+G +LYE
Sbjct: 192 -----------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE 228
Query: 767 MLVGSPPFLANTSAETQ-YKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
M PF + K I +P++ S E L+ + +KR +
Sbjct: 229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD-HYSEELRQLVNMCINPDPEKRP--DV 285
Query: 825 SEVKAHPFFSNVDFEKGVRTLTPPH 849
+ V + + H
Sbjct: 286 TYVYDVAKRMHACTASSLEHHHHHH 310
Score = 51.2 bits (123), Expect = 7e-07
Identities = 14/63 (22%), Positives = 29/63 (46%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ A+K ++ D++ A E D+L + ++ V+K Y SF + + L V++
Sbjct: 54 LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113
Query: 142 IPG 144
Sbjct: 114 ADA 116
Score = 48.1 bits (115), Expect = 7e-06
Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 422 SAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAM 481
S Q +++ + + F K IG G F EV + A+
Sbjct: 5 SQGMQGPPVPQFQPQKALRPDMGYNTLAN--FRIEKKIGRGQFSEVYRAACLLDGVPVAL 62
Query: 482 KTI 484
K +
Sbjct: 63 KKV 65
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 162 bits (413), Expect = 7e-45
Identities = 81/322 (25%), Positives = 120/322 (37%), Gaps = 79/322 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK---CVGAFGEVTLVRKIDTNHLYVMKG-SPHNN-- 596
GV V T Y +K I + EV +R+ + +++ S H N
Sbjct: 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87
Query: 597 -----------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIH 645
+ V D + G+L L +K E R + L + ++HK+ +H
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
RD+KP+NIL+D D +IKLTDFG S ++P E+
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGF---------SCQ------------LDPGEKLR----- 181
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLCDWWS 759
+ GTP+Y+APE++ GY + D WS
Sbjct: 182 ---------------------------EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 760 VGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADK 818
GVI+Y +L GSPPF +++ P S DL+ + L K
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQK 274
Query: 819 RLGKNASEVKAHPFFSNVDFEK 840
R A E AHPFF E+
Sbjct: 275 RY--TAEEALAHPFFQQYVVEE 294
Score = 43.4 bits (103), Expect = 2e-04
Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 11/72 (15%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD---------NEWVVKLYYSFQDK 132
T YA+K + + + L E D N +++L +++
Sbjct: 39 KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN--IIQLKDTYETN 96
Query: 133 DNLYFVMDYIPG 144
+ V D +
Sbjct: 97 TFFFLVFDLMKK 108
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 166 bits (421), Expect = 7e-45
Identities = 61/351 (17%), Positives = 104/351 (29%), Gaps = 103/351 (29%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GA V R T L+ +K M+ E
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNN-----------ISFLRPVDVQMR----------EF 58
Query: 576 TLVRKIDTNH---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYI 628
+++K++ + L+ + + + + +M++ P G L ++L + E +
Sbjct: 59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++ + + + G +HR+IKP NI+ D KLTDFG ++ + +
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA---------ARELEDD 169
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPE 744
SL GT Y+ P+
Sbjct: 170 E--------------------------------------------QFVSLYGTEEYLHPD 185
Query: 745 VLLRT--------GYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQ----YKVINWESC 792
+ R Y D WS+GV Y GS PF YK+I +
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 793 LHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSN---VDFEK 840
I + D + L + P +N D EK
Sbjct: 246 GAISGVQKAENGPIDWSGDMP--VSCSLSRGLQV-LLTPVLANILEADQEK 293
Score = 45.6 bits (108), Expect = 5e-05
Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFVM 139
T L+A+K L+ V E ++L + +++ +VKL+ ++ + +M
Sbjct: 31 KKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88
Query: 140 DYIPG 144
++ P
Sbjct: 89 EFCPC 93
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 162 bits (413), Expect = 2e-44
Identities = 80/337 (23%), Positives = 132/337 (39%), Gaps = 73/337 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA--FGEVTLVRKIDTNHLYVMK----GSPHNN 596
G F +N + +K I K + A E+T ++ + H ++K +
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-GHPNIVKLHEVFHDQLH 80
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI- 655
+ VM+ + GG+L + KK F E A + + +L AV +H +G +HRD+KP+N+L
Sbjct: 81 TFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 656 --DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
+ + IK+ DFG ++ + N
Sbjct: 141 DENDNLEIKIIDFGF---------ARLKPPD---------------------------NQ 164
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
PLK + T +Y APE+L + GY + CD WS+GVILY ML G P
Sbjct: 165 PLK----------------TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
Query: 774 FLANTSAETQY-------KVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNAS 825
F ++ + T K+ + A +S E DLI L +KRL S
Sbjct: 209 FQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL--KMS 266
Query: 826 EVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNF 862
++ + + + + L P I + +
Sbjct: 267 GLRYNEWLQD-GSQLSSNPLMTPDILGSSGAAVHTCV 302
Score = 44.2 bits (105), Expect = 1e-04
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFVMD 140
+N +A+K + K A+ + E L + +VKL+ F D+ + + VM+
Sbjct: 33 KKSNQAFAVKIISKRME------ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
Query: 141 YIPG 144
+ G
Sbjct: 87 LLNG 90
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 162 bits (412), Expect = 2e-44
Identities = 74/386 (19%), Positives = 137/386 (35%), Gaps = 95/386 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GA+GEV L T +K + + + I K E+
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM---------------KRAVDCPENIKK------EI 56
Query: 576 TLVRKIDTNH-----LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
+ + + NH Y + Y ++Y GG+L + EP A+ +
Sbjct: 57 CINKML--NHENVVKFYGHRREGNI--QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH 112
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L V +H +G HRDIKP+N+L+D ++K++DFGL T FR +
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR-------------YNN 159
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRT 749
++ L + + GT Y+APE+L R
Sbjct: 160 RER-------------------------------------LLNKMCGTLPYVAPELLKRR 182
Query: 750 GYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
+ + D WS G++L ML G P+ + + +Y E ++ ++ L
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-KEKKTYLNPWKKIDSAPLAL 241
Query: 809 ILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDP 867
+ + L R+ ++K ++ N + + P + + P
Sbjct: 242 LHKILVENPSARI--TIPDIKKDRWY-NKPLK---KGAKRPRVT-----SGGVSESPSGF 290
Query: 868 DKLRNSDSMLDELSDELKSPFHGFFE 893
K S+ ++ ++P G+ +
Sbjct: 291 SKHIQSNLDFSPVNSASRTPGSGWSK 316
Score = 36.5 bits (85), Expect = 0.029
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T A+K + + ++K E I ++E VVK Y ++ + Y ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 142 IPG 144
G
Sbjct: 87 CSG 89
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 160 bits (408), Expect = 2e-44
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 67/304 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV-----GAFGEVTLVRKIDTNHLYVMKGS--PHN 595
G +GEV + + T K I K E+ +++ +D ++ + + +
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ GG+L ++ K +F E A + ++ AV HK+ HRD+KP+N L
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139
Query: 656 ---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
D +KL DFGL + ++ PG+ R
Sbjct: 140 LTDSPDSPLKLIDFGL---------AARFK---------------------PGKMMR--- 166
Query: 713 SPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+ VGTP Y++P+VL Y CD WS GV++Y +L G P
Sbjct: 167 --------------------TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYP 205
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHP 831
PF A T +E K+ +SP+ LI + L +R+ + + H
Sbjct: 206 PFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI--TSLQALEHE 263
Query: 832 FFSN 835
+F
Sbjct: 264 WFEK 267
Score = 51.4 bits (124), Expect = 4e-07
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 64 LKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVV 123
L++ +G + T A K + K V K E +I+ D+ ++
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY---FVEDVDRFKQEIEIMKSLDHPNII 69
Query: 124 KLYYSFQDKDNLYFVMDYIPG 144
+LY +F+D ++Y VM+ G
Sbjct: 70 RLYETFEDNTDIYLVMELCTG 90
Score = 39.5 bits (93), Expect = 0.003
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
IG G++GEV + + T A K I K
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPK 44
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 162 bits (412), Expect = 3e-44
Identities = 93/416 (22%), Positives = 149/416 (35%), Gaps = 102/416 (24%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGE 493
S +E+ Y + + + IG G++G V + + T + A+K + K
Sbjct: 9 SGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN 68
Query: 494 VTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRK 553
V +I T EV L++K+ ++ + +Y+
Sbjct: 69 PKDVERIKT-----------------EVRLMKKLHHPNIARLYEVYE------------- 98
Query: 554 IDTNHLY-VMKTIYKCVGAFGEVTLVRKI--------DTNHLYVMKGSPHNNLYFVMDYI 604
D ++ VM+ C G G L+ K+ + V+K + I
Sbjct: 99 -DEQYICLVME---LCHG--GH--LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 605 PGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI--DRDGHIK 662
G + E L + ++ A+ +H G HRDIKP+N L ++ IK
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 663 LTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRR 722
L DFGL SK +
Sbjct: 211 LVDFGL---------SKEFYKL-------------------------------------- 223
Query: 723 RREHQRCLAHSLVGTPNYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGSPPFLANTSA 780
+ + GTP ++APEVL T Y CD WS GV+L+ +L+G+ PF A
Sbjct: 224 -NNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA 282
Query: 781 ETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSN 835
+T +V+N + C P LSP DL+ L D+R +A HP+ S
Sbjct: 283 DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF--DAMRALQHPWISQ 336
Score = 52.1 bits (125), Expect = 4e-07
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 84 TNHLYAMKTLRKADVLKRNQ--VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T + A+K + K + + N V +K E ++ + + + +LY ++D+ + VM+
Sbjct: 50 TRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109
Query: 142 IPG 144
G
Sbjct: 110 CHG 112
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 160 bits (406), Expect = 5e-44
Identities = 72/350 (20%), Positives = 130/350 (37%), Gaps = 92/350 (26%)
Query: 507 VMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIY 566
+++T+ + GA+GEV L T +K + + + I
Sbjct: 11 LVQTLGE--GAYGEVQLAVNRVTEEAVAVKIVDM---------------KRAVDCPENIK 53
Query: 567 KCVGAFGEVTLVRKIDTNH-----LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFE 620
K E+ + + + NH Y + Y ++Y GG+L +
Sbjct: 54 K------EICINKML--NHENVVKFYGHRREGNI--QYLFLEYCSGGELFDRIEPDIGMP 103
Query: 621 EPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKY 680
EP A+ + +L V +H +G HRDIKP+N+L+D ++K++DFGL T FR
Sbjct: 104 EPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR------- 156
Query: 681 YQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNY 740
+ ++ L + + GT Y
Sbjct: 157 ------YNNRER-------------------------------------LLNKMCGTLPY 173
Query: 741 IAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEA 799
+APE+L R + + D WS G++L ML G P+ + + +Y E ++
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-EKKTYLNPWK 232
Query: 800 QLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPP 848
++ L+ + L R+ ++K ++ N +KG P
Sbjct: 233 KIDSAPLALLHKILVENPSARI--TIPDIKKDRWY-NKPLKKG---AKRP 276
Score = 37.9 bits (89), Expect = 0.011
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T A+K + + ++K E I ++E VVK Y ++ + Y ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86
Query: 142 IPG 144
G
Sbjct: 87 CSG 89
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 160 bits (407), Expect = 5e-44
Identities = 80/326 (24%), Positives = 125/326 (38%), Gaps = 82/326 (25%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FGEV + T Y +K I K + EV
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINK-----------ASAKNKDTSTILR---------EV 72
Query: 576 TLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
L++K+D ++ + ++ Y V + GG+L +IK+ F E A I ++
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS 132
Query: 634 AVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
+ +HK +HRD+KP+NIL+ ++D IK+ DFGL S
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL---------STC---------- 173
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
+ + + +GT YIAPEVL T
Sbjct: 174 --FQQNTKMKD--------------------------------RIGTAYYIAPEVLRGT- 198
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
Y + CD WS GVILY +L G+PPF + +V + +P +S + DLI
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 811 Q-LCTGADKRLGKNASEVKAHPFFSN 835
+ L R+ A++ HP+
Sbjct: 259 KMLTFHPSLRI--TATQCLEHPWIQK 282
Score = 53.8 bits (130), Expect = 8e-08
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YA+K + KA K + + E ++L + D+ ++KL+ +D + Y V +
Sbjct: 46 TQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 144 G 144
G
Sbjct: 105 G 105
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 161 bits (410), Expect = 1e-43
Identities = 71/326 (21%), Positives = 116/326 (35%), Gaps = 81/326 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAF V T + K I +K+ ++ E
Sbjct: 40 GAFSVVRRCVHKTTGLEFAAKIINT-----------KKLSARDFQKLER---------EA 79
Query: 576 TLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+ RK+ ++ + S + Y V D + GG+L ++ + + E A I ++
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 139
Query: 634 AVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
++ H G +HR++KP+N+L+ + +KL DFGL +
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL---------AIE---------- 180
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
+ SE W GTP Y++PEVL +
Sbjct: 181 --VNDSEAWHG--------------------------------FAGTPGYLSPEVLKKDP 206
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
Y++ D W+ GVILY +LVG PPF ++ P ++PE LI
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 811 Q-LCTGADKRLGKNASEVKAHPFFSN 835
L KR+ A + P+ N
Sbjct: 267 SMLTVNPKKRI--TADQALKVPWICN 290
Score = 50.8 bits (122), Expect = 1e-06
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T +A K + L ++ E I + + +V+L+ S Q++ Y V D
Sbjct: 51 KTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109
Query: 142 IPG 144
+ G
Sbjct: 110 VTG 112
Score = 40.0 bits (94), Expect = 0.003
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G GAF V T +A K I
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINT 64
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 163 bits (414), Expect = 2e-43
Identities = 71/326 (21%), Positives = 116/326 (35%), Gaps = 80/326 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAF V K+ Y I + + + E
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER--------------------EA 61
Query: 576 TLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+ R + ++ + S + Y + D + GG+L ++ + + E A I ++
Sbjct: 62 RICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 634 AVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
AV H+MG +HR++KP+N+L+ + +KL DFGL + +
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL---------AIEVEGEQQ---- 168
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
GTP Y++PEVL +
Sbjct: 169 ---------------------------------------AWFGFAGTPGYLSPEVLRKDP 189
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
Y + D W+ GVILY +LVG PPF ++ P ++PE DLI
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249
Query: 811 Q-LCTGADKRLGKNASEVKAHPFFSN 835
+ L KR+ A+E HP+ S+
Sbjct: 250 KMLTINPSKRI--TAAEALKHPWISH 273
Score = 51.1 bits (123), Expect = 1e-06
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ YA + L ++ E I + +V+L+ S ++ + Y + D
Sbjct: 33 VLAGQEYAAMIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDL 91
Query: 142 IPG 144
+ G
Sbjct: 92 VTG 94
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 162 bits (412), Expect = 2e-43
Identities = 77/341 (22%), Positives = 129/341 (37%), Gaps = 82/341 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GA GEV L + T ++ I K RK E+
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISK-----------RKFAIGSAREADPALNV---ETEI 191
Query: 576 TLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
+++K++ + +K + Y V++ + GG+L ++ +E + Y ++ A
Sbjct: 192 EILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 635 VESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
V+ +H+ G IHRD+KP+N+L+ + D IK+TDFG SK
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH---------SKI----------- 291
Query: 692 SMEPSEEWSQ--GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL--- 746
+ + GTP Y+APEVL
Sbjct: 292 -LGETSLMRTLCGTPT----------------------------------YLAPEVLVSV 316
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLA-NTSAETQYKVINWESCLHIPAEAQLSPEG 805
GY + D WS+GVIL+ L G PPF T + ++ + + A++S +
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKA 376
Query: 806 ADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTL 845
DL+ + L R E HP+ + D ++ + L
Sbjct: 377 LDLVKKLLVVDPKARF--TTEEALRHPWLQDEDMKRKFQDL 415
Score = 41.6 bits (98), Expect = 0.001
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 82 IDTNHLYAMKTLRK-----ADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY 136
T A++ + K + + +V+ E +IL + ++ ++K+ F +D Y
Sbjct: 157 RKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YY 215
Query: 137 FVMDYIPG 144
V++ + G
Sbjct: 216 IVLELMEG 223
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 157 bits (398), Expect = 5e-43
Identities = 71/317 (22%), Positives = 120/317 (37%), Gaps = 89/317 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA------FGEVTLVRKIDTNHLYVMKGS--PH 594
G FG+V LV + + V+KTI K E+ +++ +D ++ + +
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY 92
Query: 595 NNLYFVMDYIPGGDL----MSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+N+Y VM+ GG+L +S + E + ++ A+ H +H+D+KP
Sbjct: 93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKP 152
Query: 651 DNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+NIL IK+ DFGL ++ ++ +
Sbjct: 153 ENILFQDTSPHSPIKIIDFGL---------AELFK---------------------SDE- 181
Query: 708 CRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
+ + GT Y+APEV R T CD WS GV++Y +
Sbjct: 182 ----------------------HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFL 218
Query: 768 LVGSPPFLANTSAETQYKVIN--------WESCLHIPAEAQLSPEGADLILQ-LCTGADK 818
L G PF + E Q K L+P+ DL+ Q L ++
Sbjct: 219 LTGCLPFTGTSLEEVQQKATYKEPNYAVECRP---------LTPQAVDLLKQMLTKDPER 269
Query: 819 RLGKNASEVKAHPFFSN 835
R +A++V H +F
Sbjct: 270 RP--SAAQVLHHEWFKQ 284
Score = 50.7 bits (122), Expect = 8e-07
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ +KT+ K + + ++AE ++L D+ ++K++ F+D N+Y VM+
Sbjct: 46 SGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103
Query: 144 G 144
G
Sbjct: 104 G 104
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 157 bits (399), Expect = 1e-42
Identities = 70/313 (22%), Positives = 110/313 (35%), Gaps = 73/313 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G F V R+ T Y K I K + R+ + +++ H
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 595 -----NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
++ +++ + GG+L L +K E A +I ++ V +H H D+K
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 650 PDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
P+NI++ HIKL DFGL + E E+
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGL---------AHEI------------EDGVEFKN---- 177
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+ GTP ++APE++ D WS+GVI Y
Sbjct: 178 ----------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
+L G+ PFL +T ET + + + S D I + L KRL
Sbjct: 210 ILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL--TI 267
Query: 825 SEVKAHPFFSNVD 837
E HP+ + VD
Sbjct: 268 QEALRHPWITPVD 280
Score = 49.9 bits (120), Expect = 2e-06
Identities = 11/65 (16%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 83 DTNHLYAMKTLRKADVLKRNQ---VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
T YA K ++K + ++ E IL + + V+ L+ ++++ ++ ++
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLIL 94
Query: 140 DYIPG 144
+ + G
Sbjct: 95 ELVSG 99
Score = 38.4 bits (90), Expect = 0.009
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G G F V R+ T YA K I K
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 157 bits (400), Expect = 1e-42
Identities = 76/309 (24%), Positives = 123/309 (39%), Gaps = 70/309 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFGEVTLVRKIDTNHLYVMK----GSPHNNL 597
G + TN + +K I K E+ ++ + H ++ +
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRY-GQHPNIITLKDVYDDGKYV 91
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL-ID 656
Y V + + GG+L+ ++++ F E A + +T VE +H G +HRD+KP NIL +D
Sbjct: 92 YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 657 RDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
G+ I++ DFG +K ++ N
Sbjct: 152 ESGNPESIRICDFGF---------AKQLRAE---------------------------NG 175
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
L + T N++APEVL R GY CD WS+GV+LY ML G P
Sbjct: 176 LLM----------------TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
Query: 774 FLANTSAETQY----KVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVK 828
F AN +T ++ + + L +S DL+ + L +RL A+ V
Sbjct: 220 F-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL--TAALVL 276
Query: 829 AHPFFSNVD 837
HP+ + D
Sbjct: 277 RHPWIVHWD 285
Score = 39.6 bits (93), Expect = 0.003
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 16/68 (23%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC-VGAFGEVTLVRKI--------------D 501
+ IGVG++ TN +A+K I K E+ ++ + D
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 502 TNHLY-VM 508
++Y V
Sbjct: 88 GKYVYVVT 95
Score = 38.8 bits (91), Expect = 0.006
Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 64 LKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVV 123
+K +G + V TN +A+K + K+ ++ +L + ++
Sbjct: 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI------LLRYGQHPNII 79
Query: 124 KLYYSFQDKDNLYFVMDYIPG 144
L + D +Y V + + G
Sbjct: 80 TLKDVYDDGKYVYVVTELMKG 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 157 bits (400), Expect = 2e-42
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L TN + +K + K V ++ D V K +
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDV-------VLMDDDVECTMVEKRVLSLA------ 74
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
H L M + NL+FVM+Y+ GGDLM + F+ A FY AE+
Sbjct: 75 -------WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEI 127
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
++ +H G ++RD+K DNIL+D+DGHIK+ DFG+C
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
Score = 149 bits (378), Expect = 1e-39
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
++ GTP+YIAPE+LL Y DWWS GV+LYEML+G PF E + +
Sbjct: 175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN 234
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEK-GVRTLTPP 848
P L E DL+++L +KRLG +++ HP F +++E+ + + PP
Sbjct: 235 --PFYPRW--LEKEAKDLLVKLFVREPEKRLG-VRGDIRQHPLFREINWEELERKEIDPP 289
Query: 849 HIPRIQNSMDTSNFD-----------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
P++++ D SNFD D + + D ++ F F
Sbjct: 290 FRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMD----------QNMFRNF 333
Score = 96.9 bits (242), Expect = 9e-22
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFV 138
TN +A+K L+K VL + V E+ +L+ A + ++ +FQ K+NL+FV
Sbjct: 37 EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 96
Query: 139 MDYIPG 144
M+Y+ G
Sbjct: 97 MEYLNG 102
Score = 56.5 bits (137), Expect = 2e-08
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQ 41
+K L+K VL + V E+ +L+ A + ++ +FQ
Sbjct: 47 IKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 88
Score = 48.8 bits (117), Expect = 4e-06
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTN 503
+ K+ FI K +G G+FG+V L TN +A+K + K V ++ D
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV-------VLMDDDVE 62
Query: 504 HLYVMKTI 511
V K +
Sbjct: 63 CTMVEKRV 70
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 156 bits (397), Expect = 2e-42
Identities = 77/304 (25%), Positives = 127/304 (41%), Gaps = 67/304 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-----FGEVTLVRKIDTNHLYVMKGS--PHN 595
G F EV LV++ T L+ +K I K E+ +++KI ++ ++
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT 79
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
+ Y VM + GG+L ++++G++ E A I ++ AV+ +H+ G +HRD+KP+N+L
Sbjct: 80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLY 139
Query: 656 ---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ + I +TDFGL SK Q N
Sbjct: 140 LTPEENSKIMITDFGL---------SKMEQ-----------------------------N 161
Query: 713 SPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+ + GTP Y+APEVL + Y++ D WS+GVI Y +L G P
Sbjct: 162 GIMS----------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHP 831
PF T ++ K+ P +S D I L ++R + +HP
Sbjct: 206 PFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERY--TCEKALSHP 263
Query: 832 FFSN 835
+
Sbjct: 264 WIDG 267
Score = 49.1 bits (118), Expect = 3e-06
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T L+A+K ++K+ + + + + E +L + +E +V L ++ + Y VM
Sbjct: 31 RLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87
Query: 142 IPG 144
+ G
Sbjct: 88 VSG 90
Score = 41.4 bits (98), Expect = 8e-04
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G GAF EV LV++ T L+A+K I K
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKK 44
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 157 bits (400), Expect = 2e-42
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L + T+ LY +K + K V +++ D V K +
Sbjct: 31 GSFGKVMLSERKGTDELYAVKILKKDV-------VIQDDDVECTMVEKRVLALP------ 77
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
L + + LYFVM+Y+ GGDLM + + G F+EP A FY AE+
Sbjct: 78 -------GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI 130
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + G I+RD+K DN+++D +GHIK+ DFG+C
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 168
Score = 146 bits (372), Expect = 1e-38
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ GTP+YIAPE++ Y + DWW+ GV+LYEML G PF E ++
Sbjct: 178 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 237
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTL 845
+ P +S E + L T KRLG + ++K H FF +D+EK + +
Sbjct: 238 --VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 293
Query: 846 TPPHIPRIQNSMDTSNFD-----------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
PP+ P+ + NFD P D + +RN D +S F GF
Sbjct: 294 QPPYKPKA-CGRNAENFDRFFTRHPPVLTPPDQEVIRNID----------QSEFEGF 339
Score = 97.3 bits (243), Expect = 7e-22
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFV 138
T+ LYA+K L+K V++ + V E+ +LA ++ +L+ FQ D LYFV
Sbjct: 40 ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99
Query: 139 MDYIPG 144
M+Y+ G
Sbjct: 100 MEYVNG 105
Score = 59.2 bits (144), Expect = 3e-09
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQ 41
+K L+K V++ + V E+ +LA ++ +L+ FQ
Sbjct: 50 VKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ 91
Score = 49.1 bits (118), Expect = 3e-06
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTN 503
R +M + F + +G G+FG+V L + T+ LYA+K + K V +++ D
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV-------VIQDDDVE 65
Query: 504 HLYVMKTI 511
V K +
Sbjct: 66 CTMVEKRV 73
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 155 bits (394), Expect = 2e-42
Identities = 62/313 (19%), Positives = 107/313 (34%), Gaps = 73/313 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL----- 597
G F V R+ T Y K I K + + R+ + +++ H N+
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 598 --------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+++ + GG+L L +K E A ++ ++ V +H H D+K
Sbjct: 76 IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK 135
Query: 650 PDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
P+NI++ + IKL DFG+ + E E+
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGI---------AHKI------------EAGNEFKN---- 170
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+ GTP ++APE++ D WS+GVI Y
Sbjct: 171 ----------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 202
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
+L G+ PFL T ET + + S D I + L +R+
Sbjct: 203 ILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM--TI 260
Query: 825 SEVKAHPFFSNVD 837
++ H + +
Sbjct: 261 AQSLEHSWIKAIR 273
Score = 49.9 bits (120), Expect = 1e-06
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQ---VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 140
T YA K ++K + + ++ E +IL E + ++ L+ F++K ++ +++
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88
Query: 141 YIPG 144
+ G
Sbjct: 89 LVSG 92
Score = 38.3 bits (90), Expect = 0.008
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G G F V R+ T YA K I K
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKK 40
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 156 bits (396), Expect = 2e-42
Identities = 57/330 (17%), Positives = 109/330 (33%), Gaps = 73/330 (22%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK-----CVGAFGEVTLVRK 580
ID H ++ + + G F V LV + H Y +K I A E + R
Sbjct: 25 IIDNKHYLFIQKLGE--GGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL 82
Query: 581 IDTNHLYVMK--------GSPHNNLYFVMDYIPGGDLMSLL----IKKGIFEEPLARFYI 628
NH +++ + + ++ + G L + + K E + +
Sbjct: 83 F--NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ +E++H G+ HRD+KP NIL+ +G L D G
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG---------- 190
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR 748
+ ++ + +Q T +Y APE+
Sbjct: 191 SRQALTLQDWAAQ---------------------------------RCTISYRAPELFSV 217
Query: 749 TGYTQL---CDWWSVGVILYEMLVGSPPF-LANTSAETQYKVINWESCLHIPAEAQLSPE 804
+ + D WS+G +LY M+ G P+ + ++ + + L IP + S
Sbjct: 218 QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ--NQLSIPQSPRHSSA 275
Query: 805 GADLILQ-LCTGADKRLGKNASEVKAHPFF 833
L+ + +R + + +
Sbjct: 276 LWQLLNSMMTVDPHQRP--HIPLLLSQLEA 303
Score = 43.9 bits (104), Expect = 2e-04
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
S +E+ Y + +D ++ I+ +G G F V LV + H YA+K I
Sbjct: 12 SGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC 64
Score = 39.6 bits (93), Expect = 0.003
Identities = 8/67 (11%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN----LYF 137
+ H YA+K + + R + + E D+ ++ +++L + +
Sbjct: 51 LHDGHFYALKRILCHEQQDREEA---QREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107
Query: 138 VMDYIPG 144
++ +
Sbjct: 108 LLPFFKR 114
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 157 bits (400), Expect = 2e-42
Identities = 71/313 (22%), Positives = 110/313 (35%), Gaps = 73/313 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G F V R+ T Y K I K + R+ + +++ H
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 595 -----NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
++ +++ + GG+L L +K E A +I ++ V +H H D+K
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 650 PDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
P+NI++ HIKL DFGL + E E+
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGL---------AHEI------------EDGVEFKN---- 177
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+ GTP ++APE++ D WS+GVI Y
Sbjct: 178 ----------------------------IFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
+L G+ PFL +T ET + +Q S D I + L KRL
Sbjct: 210 ILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL--TI 267
Query: 825 SEVKAHPFFSNVD 837
E HP+ + VD
Sbjct: 268 QEALRHPWITPVD 280
Score = 49.7 bits (119), Expect = 3e-06
Identities = 10/64 (15%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQ---VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 140
T YA K ++K + ++ E IL + + ++ L+ ++++ ++ +++
Sbjct: 36 TGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95
Query: 141 YIPG 144
+ G
Sbjct: 96 LVSG 99
Score = 38.1 bits (89), Expect = 0.011
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G G F V R+ T YA K I K
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKK 47
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 156 bits (397), Expect = 2e-42
Identities = 66/331 (19%), Positives = 110/331 (33%), Gaps = 75/331 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRK-IDTNHLYVMKGSPH------- 594
G F V T Y K + K + I L + K P
Sbjct: 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAV--LELAKSCPRVINLHEV 97
Query: 595 ----NNLYFVMDYIPGGDLMSLLIKK--GIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+ + +++Y GG++ SL + + + E I ++ V +H+ +H D+
Sbjct: 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDL 157
Query: 649 KPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP NIL+ G IK+ DFG+ S+ + E +
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGM---------SRKI------------GHACELRE---- 192
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
++GTP Y+APE+L T D W++G+I Y
Sbjct: 193 ----------------------------IMGTPEYLAPEILNYDPITTATDMWNIGIIAY 224
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
+L + PF+ + ET + + +S D I L +KR A
Sbjct: 225 MLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRP--TA 282
Query: 825 SEVKAHPFFSNVDFEKGVRTLTPPHIPRIQN 855
+H + DFE + Q+
Sbjct: 283 EICLSHSWLQQWDFENLFHPEETSSSSQTQD 313
Score = 49.2 bits (118), Expect = 3e-06
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVMDYI 142
T YA K L+K ++ A + E +L A V+ L+ +++ + +++Y
Sbjct: 53 TGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYA 111
Query: 143 PG 144
G
Sbjct: 112 AG 113
Score = 38.8 bits (91), Expect = 0.007
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 454 IKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ K +G G F V T YA K + K
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKK 64
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 157 bits (398), Expect = 4e-42
Identities = 77/314 (24%), Positives = 119/314 (37%), Gaps = 78/314 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDTNHLYVMK---GSPH--- 594
GV V T H + +K + + ++ VR+ ++++ G PH
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 595 --------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
+ ++ V D + G+L L +K E R + L AV +H +HR
Sbjct: 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+KP+NIL+D + I+L+DFG S + +EP E+ +
Sbjct: 225 DLKPENILLDDNMQIRLSDFGF---------SCH------------LEPGEKLRE----- 258
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLCDWWSV 760
L GTP Y+APE+L GY + D W+
Sbjct: 259 ---------------------------LCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291
Query: 761 GVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKR 819
GVIL+ +L GSPPF ++ + P S DLI + L + R
Sbjct: 292 GVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351
Query: 820 LGKNASEVKAHPFF 833
L A + HPFF
Sbjct: 352 L--TAEQALQHPFF 363
Score = 42.0 bits (99), Expect = 6e-04
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAH-----VKAERDILAE-ADNEWVVKLYYSFQDKDNL 135
T H +A+K + + + E IL + A + ++ L S++ +
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175
Query: 136 YFVMDYIPG 144
+ V D +
Sbjct: 176 FLVFDLMRK 184
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 155 bits (393), Expect = 1e-41
Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 75/335 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMK--------GSPH 594
GV G+V T +K +Y A EV + + +++
Sbjct: 40 GVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQA-SGGPHIVCILDVYENMHHGK 98
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
L +M+ + GG+L S + ++G F E A + ++ A++ +H HRD+KP+N
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 653 ILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
+L ++D +KLTDF GF +K
Sbjct: 159 LLYTSKEKDAVLKLTDF----GF-----AKETT--------------------------- 182
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
+ L+ + TP Y+APEVL Y + CD WS+GVI+Y +L
Sbjct: 183 --QNALQ----------------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 224
Query: 770 GSPPFLANTSAETQY----KVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
G PPF +NT ++ + P +++S + LI L T +RL
Sbjct: 225 GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERL--TI 282
Query: 825 SEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDT 859
++ HP+ + T + ++ D
Sbjct: 283 TQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWDE 317
Score = 43.5 bits (103), Expect = 2e-04
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNH 504
+ +G+G G+V T A+K +Y A EV + +
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQA-SGG 81
Score = 35.8 bits (83), Expect = 0.064
Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDIL-AEADNEWVVKLYYSFQD----KDNLYFV 138
T A+K L + ++ E D + +V + +++ K L +
Sbjct: 53 TGQKCALKLLYDSPKARQ--------EVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104
Query: 139 MDYIPG 144
M+ + G
Sbjct: 105 MECMEG 110
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 155 bits (395), Expect = 1e-41
Identities = 89/348 (25%), Positives = 131/348 (37%), Gaps = 82/348 (23%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT----NH---- 585
+K I G FG L+R T L +K I + GA + + R+I H
Sbjct: 24 FVKDIGS--GNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIV 79
Query: 586 -LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGF 643
V+ H L +M+Y GG+L + G F E ARF+ +L V H M
Sbjct: 80 RFKEVILTPTH--LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 644 IHRDIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
HRD+K +N L+D +K+ DFG SK +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGY---------SKSSVLHS---------------- 172
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSV 760
S VGTP YIAPEVLLR Y ++ D WS
Sbjct: 173 ----------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSC 204
Query: 761 GVILYEMLVGSPPF----LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTG 815
GV LY MLVG+ PF +T ++++ + IP + ++SPE LI +
Sbjct: 205 GVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK--YSIPDDIRISPECCHLISRIFVAD 262
Query: 816 ADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFD 863
R+ + E+K H +F + + + + + D
Sbjct: 263 PATRI--SIPEIKTHSWF-LKNLPADLMNESNTGSQFQEPEQPMQSLD 307
Score = 36.2 bits (84), Expect = 0.048
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 4/63 (6%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T L A+K + + + N V+ E + +V+ +L +M+Y
Sbjct: 42 KLTKELVAVKYIERGAAIDEN----VQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
Query: 142 IPG 144
G
Sbjct: 98 ASG 100
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 154 bits (392), Expect = 1e-41
Identities = 68/335 (20%), Positives = 116/335 (34%), Gaps = 76/335 (22%)
Query: 522 TLVRKIDTNHLY-VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRK 580
T+ R+ + + Y + + G F V R+ T Y K I K + R+
Sbjct: 2 TVFRQENVDDYYDTGEELGS--GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 581 IDTNHLYVMKGSPH-------------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFY 627
+ ++K H ++ +++ + GG+L L +K E A +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEF 119
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQS 683
+ ++ V +H + H D+KP+NI++ IK+ DFGL +
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL---------AHKI-- 168
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAP 743
+ E+ + GTP ++AP
Sbjct: 169 ----------DFGNEFKN--------------------------------IFGTPEFVAP 186
Query: 744 EVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSP 803
E++ D WS+GVI Y +L G+ PFL +T ET V + S
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 246
Query: 804 EGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVD 837
D I + L KR+ + HP+ D
Sbjct: 247 LAKDFIRRLLVKDPKKRM--TIQDSLQHPWIKPKD 279
Score = 51.5 bits (124), Expect = 6e-07
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQ---VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 140
T YA K ++K + ++ E IL E + V+ L+ +++K ++ +++
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 141 YIPG 144
+ G
Sbjct: 95 LVAG 98
Score = 38.8 bits (91), Expect = 0.006
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G G F V R+ T YA K I K
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKK 46
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 155 bits (393), Expect = 1e-41
Identities = 64/332 (19%), Positives = 116/332 (34%), Gaps = 82/332 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G F V +T + +K + K ++ + + + E
Sbjct: 35 GPFSVVRRCINRETGQQFAVKIVDV-----------AKFTSSPGLSTEDLKR------EA 77
Query: 576 TLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIA 629
++ + H+ + S LY V +++ G DL ++K+ ++ E +A Y+
Sbjct: 78 SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
++ A+ H IHRD+KP +L+ + +KL FG+ +
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV---------AIQLG---- 184
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL 746
E VGTP+++APEV+
Sbjct: 185 -------ESGLVAGG--------------------------------RVGTPHFMAPEVV 205
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
R Y + D W GVIL+ +L G PF T +I + ++ + +S
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAK 264
Query: 807 DLILQ-LCTGADKRLGKNASEVKAHPFFSNVD 837
DL+ + L +R+ E HP+ D
Sbjct: 265 DLVRRMLMLDPAERI--TVYEALNHPWLKERD 294
Score = 50.4 bits (121), Expect = 2e-06
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAH--VKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
+T +A+K + A ++ +K E I + +V+L ++ LY V
Sbjct: 46 RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 105
Query: 140 DYIPG 144
+++ G
Sbjct: 106 EFMDG 110
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 156 bits (395), Expect = 2e-41
Identities = 73/311 (23%), Positives = 121/311 (38%), Gaps = 74/311 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMK--------GSPH 594
G+ G+V + T + +K + C A EV L + + ++++ +
Sbjct: 73 GINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA-SQCPHIVRIVDVYENLYAGR 131
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+KP+N
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 653 ILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
+L + +KLTDFG +K S+
Sbjct: 192 LLYTSKRPNAILKLTDFGF---------AKETTSH------------------------- 217
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
L + TP Y+APEVL Y + CD WS+GVI+Y +L
Sbjct: 218 ------NSL-------------TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 258
Query: 770 GSPPFLANTSAETQY----KVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
G PPF +N ++ + P +++S E LI L T +R+
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM--TI 316
Query: 825 SEVKAHPFFSN 835
+E HP+
Sbjct: 317 TEFMNHPWIMQ 327
Score = 43.6 bits (103), Expect = 2e-04
Identities = 13/71 (18%), Positives = 31/71 (43%)
Query: 430 RKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVG 489
++ + +++K+ + + + +G+G G+V + T +A+K + C
Sbjct: 41 QQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK 100
Query: 490 AFGEVTLVRKI 500
A EV L +
Sbjct: 101 ARREVELHWRA 111
Score = 35.5 bits (82), Expect = 0.083
Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQD----KDNLYFV 138
T +A+K L+ +R E ++ + +V++ +++ + L V
Sbjct: 86 TQEKFALKMLQDCPKARR--------EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 137
Query: 139 MDYIPG 144
M+ + G
Sbjct: 138 MECLDG 143
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 153 bits (388), Expect = 3e-41
Identities = 76/330 (23%), Positives = 129/330 (39%), Gaps = 89/330 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G V + T+ Y +K I K G + R+++ LY +G +
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGH-IRSRVFREVEM--LYQCQGHRNVLELIEFF 80
Query: 595 ---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ Y V + + GG ++S + K+ F E A + ++ A++ +H G HRD+KP+
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 652 NILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
NIL ++ +K+ DF L +G + +C
Sbjct: 141 NILCEHPNQVSPVKICDFDLGSGIK------------------------------LNGDC 170
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR-----TGYTQLCDWWSVGVI 763
I++P + G+ Y+APEV+ + Y + CD WS+GVI
Sbjct: 171 SPISTP---------------ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE-----------------AQLSPEGA 806
LY +L G PPF+ ++ + E+C A +S
Sbjct: 216 LYILLSGYPPFVGRCGSDCGWD--RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAK 273
Query: 807 DLILQ-LCTGADKRLGKNASEVKAHPFFSN 835
DLI + L A +RL +A++V HP+
Sbjct: 274 DLISKLLVRDAKQRL--SAAQVLQHPWVQG 301
Score = 44.2 bits (105), Expect = 1e-04
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMD 140
+ T+ YA+K + K + + V E ++L + + V++L F+++D Y V +
Sbjct: 35 LITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91
Query: 141 YIPG 144
+ G
Sbjct: 92 KMRG 95
Score = 39.6 bits (93), Expect = 0.004
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+G GA V + T+ YA+K I K
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEK 48
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 160 bits (406), Expect = 4e-41
Identities = 65/355 (18%), Positives = 116/355 (32%), Gaps = 100/355 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA------FGEVTLVRKIDTNHLYVMKG----- 591
G FG V DT +K + + E+ +++K+ NH V+
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL--NHPNVVSAREVPD 82
Query: 592 -----SPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTCAVESVHKMGF 643
+P++ M+Y GGDL L + +E R +++++ A+ +H+
Sbjct: 83 GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI 142
Query: 644 IHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
IHRD+KP+NI++ K+ D G +K
Sbjct: 143 IHRDLKPENIVLQPGPQRLIHKIIDLGY---------AKELDQGE--------------- 178
Query: 701 QGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
L VGT Y+APE+L + YT D+WS
Sbjct: 179 -----------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 761 GVILYEMLVGSPPFLANTSAETQYKVI----------------NWESCLHIPAEAQLSPE 804
G + +E + G PFL N + + + +P LS
Sbjct: 210 GTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI 269
Query: 805 GADLILQLCTGA-----DKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQ 854
A + + +R + F +D ++ L+ ++ +
Sbjct: 270 LAGKLERWLQCMLMWHQRQRGT--DPQNPNVGCFQALDSILSLKLLSVMNMVSGR 322
Score = 37.0 bits (85), Expect = 0.028
Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 8/69 (11%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL------ 135
DT A+K R+ L E I+ + ++ VV L
Sbjct: 36 QDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93
Query: 136 YFVMDYIPG 144
M+Y G
Sbjct: 94 LLAMEYCEG 102
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 152 bits (386), Expect = 7e-41
Identities = 83/371 (22%), Positives = 137/371 (36%), Gaps = 99/371 (26%)
Query: 507 VMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYK-------CVGVFGEVTLVRKIDTNHL 559
++KTI G F +V L R I T +K I K +F EV +++ + NH
Sbjct: 19 LLKTI--GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--NHP 74
Query: 560 YVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIF 619
++K ++ EV I+T LY +M+Y GG++ L+ G
Sbjct: 75 NIVK-LF-------EV-----IETE----------KTLYLIMEYASGGEVFDYLVAHGRM 111
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK 679
+E AR ++ AV+ H+ +HRD+K +N+L+D D +IK+ DFG F
Sbjct: 112 KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT------ 165
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPN 739
G + G P
Sbjct: 166 ------------------------VGG-----------------------KLDAFCGAPP 178
Query: 740 YIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE 798
Y APE+ Y D WS+GVILY ++ GS PF E + +V+ IP
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIP-- 234
Query: 799 AQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHI----PRI 853
+S + +L+ + L KR ++ + + E ++ P + +
Sbjct: 235 FYMSTDCENLLKRFLVLNPIKRG--TLEQIMKDRWINAGHEEDELKPFVEPELDISDQKR 292
Query: 854 QNSMDTSNFDP 864
+ M +
Sbjct: 293 IDIMVGMGYSQ 303
Score = 38.0 bits (89), Expect = 0.011
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
I T A+K + K L + + E I+ ++ +VKL+ + + LY +M+Y
Sbjct: 37 ILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95
Query: 142 IPG 144
G
Sbjct: 96 ASG 98
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 151 bits (384), Expect = 2e-40
Identities = 67/312 (21%), Positives = 116/312 (37%), Gaps = 83/312 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA---FGEVTLVRKIDTNHLYVMKGS--PHNNL 597
G V ++ T Y +K + K V E+ ++ ++ ++ +K +
Sbjct: 64 GATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEI 123
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI-- 655
V++ + GG+L +++KG + E A + ++ AV +H+ G +HRD+KP+N+L
Sbjct: 124 SLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183
Query: 656 -DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
D +K+ DFGL SK +E
Sbjct: 184 PAPDAPLKIADFGL---------SKI------------VEHQVLM--------------- 207
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
++ GTP Y APE+L Y D WSVG+I Y +L G PF
Sbjct: 208 -----------------KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
Query: 775 LANTSAETQYKVIN----------WESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKN 823
+ ++ I W+ +S DL+ + + KRL
Sbjct: 251 YDERGDQFMFRRILNCEYYFISPWWDE---------VSLNAKDLVRKLIVLDPKKRL--T 299
Query: 824 ASEVKAHPFFSN 835
+ HP+ +
Sbjct: 300 TFQALQHPWVTG 311
Score = 46.2 bits (110), Expect = 3e-05
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 64 LKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVV 123
++S LG T + + T YA+K L K V+ E +L + ++
Sbjct: 57 VESELGRGATSIVYRCKQKGTQKPYALKVL-----KKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 124 KLYYSFQDKDNLYFVMDYIPG 144
KL F+ + V++ + G
Sbjct: 112 KLKEIFETPTEISLVLELVTG 132
Score = 36.9 bits (86), Expect = 0.028
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+G GA V ++ T YA+K + K
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKK 88
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 149 bits (379), Expect = 6e-40
Identities = 61/314 (19%), Positives = 106/314 (33%), Gaps = 87/314 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLY----VMKGSPHNNL- 597
G FG V + + Y+ K + + D + ++ + H N+
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKV-----------KGTDQVLVKKEISILNIARHRNIL 64
Query: 598 ------------YFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFI 644
+ ++I G D+ + E Y+ ++ A++ +H
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124
Query: 645 HRDIKPDNILI--DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
H DI+P+NI+ R IK+ +FG ++ +
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQ---------ARQLK-------------------- 155
Query: 703 TPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
PG R + P Y APEV + D WS+G
Sbjct: 156 -PGDNFRLL-----------------------FTAPEYYAPEVHQHDVVSTATDMWSLGT 191
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLG 821
++Y +L G PFLA T+ + ++N E A ++S E D + + L R+
Sbjct: 192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRM- 250
Query: 822 KNASEVKAHPFFSN 835
ASE HP+
Sbjct: 251 -TASEALQHPWLKQ 263
Score = 50.7 bits (122), Expect = 9e-07
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ Y K ++ K VK E IL A + ++ L+ SF+ + L + ++
Sbjct: 27 TSSKKTYMAKFVKV----KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82
Query: 142 IPG 144
I G
Sbjct: 83 ISG 85
Score = 37.6 bits (88), Expect = 0.014
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G G FG V + + Y K +
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKV 40
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 150 bits (379), Expect = 1e-39
Identities = 50/352 (14%), Positives = 86/352 (24%), Gaps = 94/352 (26%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCV--------GVFGEVTLVRKIDTNHLYVMKTIYK 567
G V LVR ++ + +K + ++ + +
Sbjct: 73 GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRR 132
Query: 568 CVGAFGEVTLVRKIDTNHLY-VMKGSPHNNLYFVMDYIPGGDLMSLL-------IKKGIF 619
+ V + + L N +M DL L + +G
Sbjct: 133 LLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPA-ASVDLELLFSTLDFVYVFRGDE 191
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK 679
A+L ++ G +H PDN+ I DG + L D
Sbjct: 192 GILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW--------- 242
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPN 739
G + P
Sbjct: 243 -----------------------KVGTRGPASSVP-----------------------VT 256
Query: 740 YIAPEVLLR--TGYTQLCDWWSVGVILYEMLVGSPPF-LANTSAETQYKVI--------- 787
Y E L +T + W +G+ +Y + PF L + +K
Sbjct: 257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDS 316
Query: 788 -NWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVD 837
+ SC +P + LI + L +RL E P F +
Sbjct: 317 LAFGSCTPLPDFVK------TLIGRFLNFDRRRRL--LPLEAMETPEFLQLQ 360
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 149 bits (379), Expect = 2e-39
Identities = 76/319 (23%), Positives = 123/319 (38%), Gaps = 78/319 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FG+V + T K I K G + + +I VM H
Sbjct: 100 GRFGQVHKCEETATGLKLAAKII-KTRGMKDKEEVKNEIS-----VMNQLDHANLIQLYD 153
Query: 595 -----NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
N++ VM+Y+ GG+L +I + E ++ ++ + +H+M +H D+
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDL 213
Query: 649 KPDNIL-IDRDGH-IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
KP+NIL ++RD IK+ DFGL ++ Y+ P +
Sbjct: 214 KPENILCVNRDAKQIKIIDFGL---------ARRYK---------------------PRE 243
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
+ + GTP ++APEV+ + D WSVGVI Y
Sbjct: 244 KLKVN-----------------------FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYM 280
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNAS 825
+L G PFL + AET ++ L +S E + I + L R+ +AS
Sbjct: 281 LLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRI--SAS 338
Query: 826 EVKAHPFFSNVDFEKGVRT 844
E HP+ S+ +
Sbjct: 339 EALKHPWLSDHKLHSRLSA 357
Score = 52.0 bits (125), Expect = 4e-07
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T A K ++ VK E ++ + D+ +++LY +F+ K+++ VM+Y+
Sbjct: 113 TGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169
Query: 144 G 144
G
Sbjct: 170 G 170
Score = 37.8 bits (88), Expect = 0.014
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
K + +G G FG+V + T A K I
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT 124
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 150 bits (381), Expect = 3e-39
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 28/177 (15%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
++ N +K + K G FG+V LV++ T Y MK + K V +V K +
Sbjct: 143 HRVTMNEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEV-------IVAKDEVA 193
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLL 613
H + + ++ H L +K S H+ L FVM+Y GG+L L
Sbjct: 194 HTLTENRVLQ--------------NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL 239
Query: 614 IKKGIFEEPLARFYIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
++ +F E ARFY AE+ A++ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 240 SRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Score = 144 bits (366), Expect = 3e-37
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF + ++ E
Sbjct: 306 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 365
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTL 845
+ P L PE L+ L +RLG ++A E+ H FF+ + ++ + L
Sbjct: 366 --IRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKL 421
Query: 846 TPPHIPRIQNSMDTSNFDP 864
+PP P++ + DT FD
Sbjct: 422 SPPFKPQVTSETDTRYFDE 440
Score = 99.0 bits (247), Expect = 6e-22
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
+ T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM
Sbjct: 168 KEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227
Query: 140 DYIPG 144
+Y G
Sbjct: 228 EYANG 232
Score = 60.5 bits (147), Expect = 1e-09
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 178 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
Score = 49.0 bits (117), Expect = 5e-06
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Query: 415 EMAKIGLSAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKID 474
+ A + + +++ + + ++ + F +K +G G FG+V LV++
Sbjct: 112 KQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKA 171
Query: 475 TNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCV 515
T YAMK + K V +V K + H + +
Sbjct: 172 TGRYYAMKILKKEV-------IVAKDEVAHTLTENRVLQNS 205
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 148 bits (376), Expect = 6e-39
Identities = 60/326 (18%), Positives = 111/326 (34%), Gaps = 67/326 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-----FGEVTLVRKIDTNHLYVMKGS--PHN 595
G FG V + T ++V K I E++++ ++ L + +
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY 121
Query: 596 NLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ +++++ GG+L + + E Y+ + ++ +H+ +H DIKP+NI+
Sbjct: 122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIM 181
Query: 655 I--DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ +K+ DFGL + P + +
Sbjct: 182 CETKKASSVKIIDFGL---------ATKLN---------------------PDEIVKVT- 210
Query: 713 SPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
T + APE++ R D W++GV+ Y +L G
Sbjct: 211 ----------------------TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 248
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHP 831
PF ET V + A + +SPE D I L KRL + HP
Sbjct: 249 PFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL--TVHDALEHP 306
Query: 832 FFSNVDFEKGVRTLTPPHIPRIQNSM 857
+ D + +I+ +
Sbjct: 307 WLKG-DHSNLTSRIPSSRYNKIRQKI 331
Score = 51.6 bits (124), Expect = 7e-07
Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T ++ K + VK E I+ + + ++ L+ +F+DK + ++++
Sbjct: 73 KATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129
Query: 142 IPG 144
+ G
Sbjct: 130 LSG 132
Score = 38.5 bits (90), Expect = 0.009
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G GAFG V + T ++ K I
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINT 86
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 145 bits (368), Expect = 2e-38
Identities = 54/295 (18%), Positives = 96/295 (32%), Gaps = 56/295 (18%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMK--GS--PHNNLY 598
G FGEV ++ T +K + V E+ + ++ G+ +
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLS--SPRIVPLYGAVREGPWVN 126
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ + G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 186
Query: 659 G-HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
G L DFG P + + +
Sbjct: 187 GSRAALCDFGHAL------------------------------CLQPDGLGKSLLT---- 212
Query: 718 LERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+ GT ++APEV++ D WS ++ ML G P+
Sbjct: 213 -------------GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
K+ + E +P A I + + +A E++
Sbjct: 260 FRGPLCLKIAS-EPPPIREIPPSCAPLTAQAIQE-GLRKEPVHRASAMELRRKVG 312
Score = 38.6 bits (90), Expect = 0.009
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
T A+K +R E A + +V LY + ++ + M+ +
Sbjct: 81 QTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132
Query: 143 PG 144
G
Sbjct: 133 EG 134
Score = 29.7 bits (67), Expect = 4.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 459 IGVGAFGEVTLVRKIDTNHLYAMKTI 484
+G G+FGEV ++ T A+K +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 152 bits (384), Expect = 3e-38
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L + T+ LY +K + K V +++ D V K +
Sbjct: 352 GSFGKVMLSERKGTDELYAVKILKKDV-------VIQDDDVECTMVEKRVLALP------ 398
Query: 576 TLVRKIDTNH--LYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
L + + LYFVM+Y+ GGDLM + + G F+EP A FY AE+
Sbjct: 399 -------GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI 451
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + G I+RD+K DN+++D +GHIK+ DFG+C
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489
Score = 144 bits (364), Expect = 7e-36
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 31/177 (17%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ GTP+YIAPE++ Y + DWW+ GV+LYEML G PF E ++
Sbjct: 499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 558
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTL 845
+ P +S E + L T KRLG + ++K H FF +D+EK + +
Sbjct: 559 --VAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 614
Query: 846 TPPHIPRIQNSMDTSNFD-----------PVDPDKLRNSDSMLDELSDELKSPFHGF 891
PP+ P+ + + NFD P D + +RN D +S F GF
Sbjct: 615 QPPYKPKA-SGRNAENFDRFFTRHPPVLTPPDQEVIRNID----------QSEFEGF 660
Score = 92.0 bits (228), Expect = 3e-19
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQDKDNLYFV 138
T+ LYA+K L+K V++ + V E+ +LA + +L+ FQ D LYFV
Sbjct: 361 ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420
Query: 139 MDYIPG 144
M+Y+ G
Sbjct: 421 MEYVNG 426
Score = 55.0 bits (132), Expect = 8e-08
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEW-VVKLYYSFQ 41
+K L+K V++ + V E+ +LA + +L+ FQ
Sbjct: 371 VKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ 412
Score = 49.6 bits (118), Expect = 4e-06
Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 17/253 (6%)
Query: 259 PVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPAS 318
++ + R A +P + L+ S ++++ S
Sbjct: 159 RRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKS 218
Query: 319 ASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSPIPERKHMTKEKEDERRECK 378
+ + E S + + T + + E + +
Sbjct: 219 SLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT---SRNDFMGSLSFGISELQKAGVDGW 275
Query: 379 VKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKIGLSAEAQCQMRKMLSQKES 438
K S + ++F + L+ + E AKIG +A + K
Sbjct: 276 FKLLSQEEGEYFNVP-----VPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFD 330
Query: 439 NYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVR 498
N R K+ F + +G G+FG+V L + T+ LYA+K + K V +++
Sbjct: 331 NNGNRDRMKLTD--FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV-------VIQ 381
Query: 499 KIDTNHLYVMKTI 511
D V K +
Sbjct: 382 DDDVECTMVEKRV 394
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 143 bits (363), Expect = 4e-38
Identities = 72/374 (19%), Positives = 126/374 (33%), Gaps = 95/374 (25%)
Query: 506 YVM-KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKT 564
Y+M + + G++G+V V +T +K + K +K+
Sbjct: 7 YLMGDLLGE--GSYGKVKEVLDSETLCRRAVKILKK-----------KKLRRIPNGEAN- 52
Query: 565 IYKCVGAFGEVTLVRKIDTNH-----LY-VMKGSPHNNLYFVMDYIPGGDLMSLL--IKK 616
+ K E+ L+R++ H L V+ +Y VM+Y G + +L + +
Sbjct: 53 VKK------EIQLLRRL--RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE 103
Query: 617 GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 676
F A Y +L +E +H G +H+DIKP N+L+ G +K++ G+
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV-------- 155
Query: 677 NSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVG 736
+E C G
Sbjct: 156 -------------------AEALHPFAADDTC-----------------RTSQ------G 173
Query: 737 TPNYIAPEVLL-RTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+P + PE+ ++ D WS GV LY + G PF + + +
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGS--YA 231
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRI 853
IP + P +DL+ L KR + +++ H +F P IP
Sbjct: 232 IPGD--CGPPLSDLLKGMLEYEPAKRF--SIRQIRQHSWF-RKKHP---PAEAPVPIPPS 283
Query: 854 QNSMDTSNFDPVDP 867
++ D V P
Sbjct: 284 PDTKDRWRSMTVVP 297
Score = 37.2 bits (87), Expect = 0.018
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 82 IDTNHLYAMKTLRKADVLK-RNQVAHVKAERDILAEADNEWVVKLY--YSFQDKDNLYFV 138
+T A+K L+K + + N A+VK E +L ++ V++L ++K +Y V
Sbjct: 27 SETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86
Query: 139 MDYIPG 144
M+Y
Sbjct: 87 MEYCVC 92
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 144 bits (364), Expect = 1e-37
Identities = 45/288 (15%), Positives = 82/288 (28%), Gaps = 80/288 (27%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNH-----LYVMKTIYK-CVGAFGEVTLVR 579
++ + +YV + + G F +V + D N +V+K F T +
Sbjct: 61 QLGSKLVYVHHLLGE--GAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118
Query: 580 KI--DTNHLYVMKGSPH----NNLYFVMDYIPGGDLMSLLIKKGI-----FEEPLARFYI 628
+ + MK N V + G L++ + + L +
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILI-----------DRDGHIKLTDFGLCTGFRWTHN 677
+ +E VH IH DIKPDN ++ D + L D G
Sbjct: 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ--------- 229
Query: 678 SKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGT 737
+ P + + T
Sbjct: 230 ----------SIDMKLFPKGT-------------------------------IFTAKCET 248
Query: 738 PNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYK 785
+ E+L + D++ V +Y ML G+ + N E + +
Sbjct: 249 SGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296
Score = 50.4 bits (120), Expect = 2e-06
Identities = 6/61 (9%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ +K + A + + L + +K Y + ++ V +
Sbjct: 94 NKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYS 150
Query: 144 G 144
Sbjct: 151 Y 151
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 143 bits (363), Expect = 1e-37
Identities = 74/359 (20%), Positives = 116/359 (32%), Gaps = 95/359 (26%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLY----VM 589
M + G FG V + N V+K I K E + + ++
Sbjct: 28 TMSPLGS--GAFGFVWTAVDKEKNKEVVVKFIKKE--KVLEDCWIEDPKLGKVTLEIAIL 83
Query: 590 KGSPHNN-------------LYFVMD-YIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
H N VM+ + G DL + + + +EPLA + +L AV
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+ IHRDIK +NI+I D IKL DFG
Sbjct: 144 GYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL----------------------- 180
Query: 696 SEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT-QL 754
G+ L ++ GT Y APEVL+ Y
Sbjct: 181 -------ERGK-----------------------LFYTFCGTIEYCAPEVLMGNPYRGPE 210
Query: 755 CDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LC 813
+ WS+GV LY ++ PF + + +H P +S E L+ L
Sbjct: 211 LEMWSLGVTLYTLVFEENPF------CELEETVEAA--IHPPYL--VSKELMSLVSGLLQ 260
Query: 814 TGADKRLGKNASEVKAHPFF------SNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVD 866
++R ++ P+ ++ +E+ R P S++ N D
Sbjct: 261 PVPERRT--TLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGNRSLSD 317
Score = 103 bits (259), Expect = 4e-24
Identities = 46/247 (18%), Positives = 82/247 (33%), Gaps = 71/247 (28%)
Query: 432 MLSQKESNYIRLKRAKMDKSMFIK----IKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC 487
M ++ + L+ + + + + P+G GAFG V + N +K I K
Sbjct: 1 MALEEPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK- 59
Query: 488 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGE 547
K+ + + K + +I ++ +
Sbjct: 60 ----------EKVLEDCWIEDPKLGK---------VTLEIA-----ILSRV--------- 86
Query: 548 VTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMD-YIPG 606
H ++K + ++ + VM+ + G
Sbjct: 87 ---------EHANIIK-VL-------DI-----FENQ----------GFFQLVMEKHGSG 114
Query: 607 GDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDF 666
DL + + + +EPLA + +L AV + IHRDIK +NI+I D IKL DF
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 667 GLCTGFR 673
G
Sbjct: 175 GSAAYLE 181
Score = 35.9 bits (83), Expect = 0.051
Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQV-----AHVKAERDILAEADNEWVVKLYYSFQDKDNLY 136
+ N +K ++K VL+ + V E IL+ ++ ++K+ F+++
Sbjct: 46 KEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ 105
Query: 137 FVMD-YIPGEKLIPY 150
VM+ + G L +
Sbjct: 106 LVMEKHGSGLDLFAF 120
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 141 bits (358), Expect = 1e-37
Identities = 48/312 (15%), Positives = 90/312 (28%), Gaps = 65/312 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI-YKCVGAFGEVTLVRKIDTNHLYVMKGSPH------- 594
G FG V K +Y +K G+ E +R++ V+ H
Sbjct: 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA--HAVLGQHSHVVRYFSA 79
Query: 595 ----NNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
+++ +Y GG L + + F+E + + ++ + +H M +H
Sbjct: 80 WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHM 139
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
DIKP NI I R ++ + GD G +
Sbjct: 140 DIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF--KIGDLGHVTRIS------------ 185
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILY 765
G ++A EVL + D +++ + +
Sbjct: 186 -----------------------SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNA 824
P Q+ I LS E +L+ + ++R +A
Sbjct: 223 CAAGAEPLP----RNGDQWHEIR--QGRLPRIPQVLSQEFTELLKVMIHPDPERR--PSA 274
Query: 825 SEVKAHPFFSNV 836
+ H +
Sbjct: 275 MALVKHSVLLSA 286
Score = 43.9 bits (104), Expect = 1e-04
Identities = 9/62 (14%), Positives = 25/62 (40%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+YA+K +K ++ ++ + VV+ + ++ + D++ +Y
Sbjct: 34 LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93
Query: 143 PG 144
G
Sbjct: 94 NG 95
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 146 bits (370), Expect = 7e-37
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 29/178 (16%)
Query: 498 RKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTN 557
+ + N + + K G FGEV + T +Y K + K + ++
Sbjct: 179 QPVTKNTFRQYRVLGK--GGFGEVCACQVRATGKMYACKKLEKKR-------IKKRKGEA 229
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYV--MKGSPH--NNLYFVMDYIPGGDLMSLL 613
K I + V N +V + + + L V+ + GGDL +
Sbjct: 230 MALNEKQILEKV--------------NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 614 IKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
G F E A FY AE+ C +E +H+ ++RD+KP+NIL+D GHI+++D GL
Sbjct: 276 YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
Score = 133 bits (337), Expect = 9e-33
Identities = 51/168 (30%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
VGT Y+APEV+ YT DWW++G +LYEM+ G PF + +V
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--R 399
Query: 791 SCLHIPAE--AQLSPEGADLILQLCT-GADKRLG---KNASEVKAHPFFSNVDFEK-GVR 843
+P E + SP+ L QL +RLG +A EVK HP F ++F++ G
Sbjct: 400 LVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAG 459
Query: 844 TLTPPHIPRIQNSMDTSNFDPVDPDKLRNSDSMLDELSDELKSPFHGF 891
L PP P Q D + S EL + + F
Sbjct: 460 MLEPPFKPDPQAIYCKDVLDI-EQF----STVKGVELEPTDQDFYQKF 502
Score = 94.5 bits (235), Expect = 4e-20
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
++ T +YA K L K + KR A E+ IL + ++ +VV L Y+++ KD L V+
Sbjct: 204 QVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263
Query: 140 DYIPG 144
+ G
Sbjct: 264 TLMNG 268
Score = 58.6 bits (142), Expect = 7e-09
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
K L K + KR A E+ IL + ++ +VV L Y+++
Sbjct: 214 CKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Score = 55.2 bits (133), Expect = 6e-08
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 368 KEKEDERRECKVKNY-------SPQAFKFFMEQHIENVIKSHKQRVFRRL-QLETEMAKI 419
+D+R+ C P Q + N + +Q + L Q T +
Sbjct: 92 VTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHE 151
Query: 420 GLSAEAQCQMRKMLS-QKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHL 478
LS + + + L+R + K+ F + + +G G FGEV + T +
Sbjct: 152 YLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKM 211
Query: 479 YAMKTIYK 486
YA K + K
Sbjct: 212 YACKKLEK 219
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 146 bits (369), Expect = 8e-37
Identities = 61/315 (19%), Positives = 111/315 (35%), Gaps = 66/315 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-----FGEVTLVRKIDTNHLYVMKGS--PHN 595
G FG V V + T + + K + + E+ + + L + + N
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN 227
Query: 596 NLYFVMDYIPGGDLMSLLI-KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ + +++ GG+L + + E A Y+ ++ + +H+ ++H D+KP+NI+
Sbjct: 228 EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIM 287
Query: 655 I--DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
R +KL DFGL + + P Q +
Sbjct: 288 FTTKRSNELKLIDFGL---------TAHLD---------------------PKQSVK--- 314
Query: 713 SPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
GT + APEV D WSVGV+ Y +L G
Sbjct: 315 --------------------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 354
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHP 831
PF ET V + + + A + +S +G D I + L + R+ + HP
Sbjct: 355 PFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM--TIHQALEHP 412
Query: 832 FFSNVDFEKGVRTLT 846
+ + + +
Sbjct: 413 WLTPGNAPGRDSQIP 427
Score = 50.2 bits (120), Expect = 2e-06
Identities = 10/61 (16%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T + +A K + + V+ E ++ + +V L+ +F+D + + + +++
Sbjct: 181 TGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237
Query: 144 G 144
G
Sbjct: 238 G 238
Score = 36.7 bits (85), Expect = 0.038
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+ +G GAFG V V + T + +A K +
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMT 192
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 143 bits (361), Expect = 1e-36
Identities = 80/436 (18%), Positives = 136/436 (31%), Gaps = 133/436 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDTNH-----LYVMKGSPHN 595
G G V + +K + C A E+ L+ + D +H Y + +
Sbjct: 26 GSSGTVVF-QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-DHPNVIRYYCSETTD-R 82
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAE-------LTCAVESVHKMGFIHRDI 648
LY ++ +L L+ K + +E L + V +H + IHRD+
Sbjct: 83 FLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDL 141
Query: 649 KPDNILID-------------RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
KP NIL+ + I ++DFGLC +G + ++
Sbjct: 142 KPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD----------SGQSSFRTNL-- 189
Query: 696 SEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-------R 748
++ GT + APE+L +
Sbjct: 190 ------------------------------------NNPSGTSGWRAPELLEESNNLQTK 213
Query: 749 TGYTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWE-SCLHIPAEAQLSPEGA 806
T+ D +S+G + Y +L G PF S E+ + + + L E
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEAT 273
Query: 807 DLILQ-LCTGADKRLGKNASEVKAHPFFSNVD------------FEKGVRTLTPPHIPRI 853
DLI Q + KR A +V HP F E R + +
Sbjct: 274 DLISQMIDHDPLKRP--TAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKF 331
Query: 854 QNSMDT--------SNFDPVDPDKLR-----NSDSMLD-------------ELSDELKSP 887
D FD D L +S ++D +L +++
Sbjct: 332 DAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSKLMDLLRALRNKYHHFMDLPEDIAEL 391
Query: 888 F----HGFFEFTFRRF 899
GF+++ +RF
Sbjct: 392 MGPVPDGFYDYFTKRF 407
Score = 45.5 bits (108), Expect = 6e-05
Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 15/67 (22%)
Query: 84 TNHLYAMKTLRKA--DVLKRNQVAHVKAERDILAEAD---NEWVVKLYYSFQDKDNLYFV 138
A+K + D+ E +L E+D N V++ Y S LY
Sbjct: 38 QGRPVAVKRMLIDFCDIALM--------EIKLLTESDDHPN--VIRYYCSETTDRFLYIA 87
Query: 139 MDYIPGE 145
++
Sbjct: 88 LELCNLN 94
Score = 37.5 bits (87), Expect = 0.019
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK--CVGAFGEVTLVRKIDTNHLYV 507
K++ + K +G G+ G V + A+K + C A E+ L+ + D +H V
Sbjct: 14 KNLVVSEKILGYGSSGTVVF-QGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-DHPNV 71
Query: 508 MKTIYKCV 515
++ Y C
Sbjct: 72 IR--YYCS 77
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 139 bits (351), Expect = 2e-35
Identities = 63/310 (20%), Positives = 99/310 (31%), Gaps = 72/310 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDTNHLYVMK----GSPHNN 596
G G + R + N +K I A EV L+R+ D H V++
Sbjct: 35 GAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESD-EHPNVIRYFCTEKDRQF 92
Query: 597 LYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
Y ++ L + +K + + T + +H + +HRD+KP NILI
Sbjct: 93 QYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILI 151
Query: 656 DRDGH-----IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
++DFGLC K
Sbjct: 152 SMPNAHGKIKAMISDFGLC---------KKLAVG-------------------------- 176
Query: 711 INSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWWSVGVILYEM 767
H + GT +IAPE+L T D +S G + Y +
Sbjct: 177 --------------RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYV 222
Query: 768 LV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNAS 825
+ GS PF + + + S + E +LI + + KR +A
Sbjct: 223 ISEGSHPFGKSLQRQANIL-LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP--SAK 279
Query: 826 EVKAHPFFSN 835
V HPFF +
Sbjct: 280 HVLKHPFFWS 289
Score = 44.8 bits (106), Expect = 1e-04
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 11/65 (16%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEAD---NEWVVKLYYSFQDKDNLYFVMD 140
N A+K + ++ E +L E+D N V++ + + +D+ Y ++
Sbjct: 47 DNRDVAVKRILPECFSFADR------EVQLLRESDEHPN--VIRYFCTEKDRQFQYIAIE 98
Query: 141 YIPGE 145
Sbjct: 99 LCAAT 103
Score = 36.7 bits (85), Expect = 0.038
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK--CVGAFGEVTLVRKIDTNH 504
+ K F +G GA G + R + N A+K I A EV L+R+ D H
Sbjct: 20 IVGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESD-EH 77
Query: 505 LYVMKTIYKCV 515
V++ Y C
Sbjct: 78 PNVIR--YFCT 86
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 139 bits (351), Expect = 5e-35
Identities = 80/389 (20%), Positives = 142/389 (36%), Gaps = 104/389 (26%)
Query: 509 KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC 568
T+ G FG+V + + T H +K + + +KI + + + I +
Sbjct: 22 DTLGV--GTFGKVKVGKHELTGHKVAVKILNR-----------QKIRSLDV--VGKIRR- 65
Query: 569 VGAFGEVTLVRKIDTNH---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLA 624
E+ ++ H LY V+ ++++ VM+Y+ GG+L + K G +E +
Sbjct: 66 -----EIQNLKLFRHPHIIKLYQVISTP--SDIFMVMEYVSGGELFDYICKNGRLDEKES 118
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
R ++ V+ H+ +HRD+KP+N+L+D + K+ DFGL S
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL---------SNMMSDG 169
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPE 744
+ G+PNY APE
Sbjct: 170 E--------------------------------------------FLRTSCGSPNYAAPE 185
Query: 745 VLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSP 803
V+ Y D WS GVILY +L G+ PF + K+ + + P L+P
Sbjct: 186 VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNP 241
Query: 804 EGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNF 862
L+ L KR +++ H +F + + P P ++M
Sbjct: 242 SVISLLKHMLQVDPMKRA--TIKDIREHEWFK-----QDLPKYLFPEDPSYSSTM----- 289
Query: 863 DPVDPDKLRNSDSML----DELSDELKSP 887
+D + L+ +E+ L +
Sbjct: 290 --IDDEALKEVCEKFECSEEEVLSCLYNR 316
Score = 92.5 bits (230), Expect = 1e-19
Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 73/218 (33%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVG 516
+GVG FG+V + + T H A+K + + +KI + + + I +
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNR-----------QKIRSLDV--VGKIRR--- 65
Query: 517 AFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLY-VMKTIYKCVGAFGEV 575
E+ ++ H +++K LY V+ T
Sbjct: 66 ---EIQNLKLF--RHPHIIK----------------------LYQVIST----------- 87
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ ++ VM+Y+ GG+L + K G +E +R ++ V
Sbjct: 88 -------PSDIF-----------MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGV 129
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
+ H+ +HRD+KP+N+L+D + K+ DFGL
Sbjct: 130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
Score = 42.1 bits (99), Expect = 7e-04
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T H A+K L + + + V ++ E L + ++KLY +++ VM+Y
Sbjct: 38 ELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97
Query: 142 IPG 144
+ G
Sbjct: 98 VSG 100
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 133 bits (336), Expect = 2e-34
Identities = 70/310 (22%), Positives = 112/310 (36%), Gaps = 75/310 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY----KCVGAF-GEVTLVRKIDTNHLYVMK--GS--P 593
G +G V R + +K I + E+ L + + H +++ GS
Sbjct: 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK--HKNIVQYLGSFSE 90
Query: 594 HNNLYFVMDYIPGGDLMSLLIKK-GIFE--EPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+ + M+ +PGG L +LL K G + E FY ++ ++ +H +HRDIK
Sbjct: 91 NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 651 DNILID-RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
DN+LI+ G +K++DFG SK
Sbjct: 151 DNVLINTYSGVLKISDFGT---------SKRLAGINPC---------------------- 179
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL--RTGYTQLCDWWSVGVILYEM 767
+ GT Y+APE++ GY + D WS+G + EM
Sbjct: 180 ---------------------TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEM 218
Query: 768 LVGSPPFLANTSAETQ--YKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
G PPF +KV ++ IP +S E IL+ C D A+
Sbjct: 219 ATGKPPF-YELGEPQAAMFKVGMFKVHPEIP--ESMSAEAKAFILK-CFEPDPDKRACAN 274
Query: 826 EVKAHPFFSN 835
++ F
Sbjct: 275 DLLVDEFLKV 284
Score = 38.1 bits (89), Expect = 0.010
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
A+K + + D + E + ++ +V+ SF + + M+ +
Sbjct: 45 SNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101
Query: 143 PG 144
PG
Sbjct: 102 PG 103
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 133 bits (336), Expect = 2e-34
Identities = 69/328 (21%), Positives = 115/328 (35%), Gaps = 94/328 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVM-KTIYKCVGAFGE 574
G FG V ++ N +K + K +I + E
Sbjct: 54 GGFGSVYSGIRVSDNLPVAIKHVEK-----------DRISDWGELPNGTRVPM------E 96
Query: 575 VTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYI-PGGDLMSLLIKKGIFEEPLARFYI 628
V L++K+ + V++ P ++ +++ P DL + ++G +E LAR +
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERP-DSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
++ AV H G +HRDIK +NILID + G +KL DFG ++ Y
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA---LLKDTVY------- 205
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL 747
GT Y PE +
Sbjct: 206 ----------TDFDGTR----------------------------------VYSPPEWIR 221
Query: 748 RTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
Y + WS+G++LY+M+ G PF E ++I + + ++S E
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPF------EHDEEIIRGQ--VFFR--QRVSSECQ 271
Query: 807 DLILQ-LCTGADKRLGKNASEVKAHPFF 833
LI L R E++ HP+
Sbjct: 272 HLIRWCLALRPSDRP--TFEEIQNHPWM 297
Score = 35.4 bits (82), Expect = 0.077
Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAH---VKAERDILAEADNEW--VVKLYYSFQDKDNLY 136
+ N A+K + K + ++ + V E +L + + + V++L F+ D+
Sbjct: 65 VSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 124
Query: 137 FVMDYIPG 144
+++
Sbjct: 125 LILERPEP 132
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 132 bits (335), Expect = 3e-34
Identities = 71/327 (21%), Positives = 113/327 (34%), Gaps = 90/327 (27%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYK-----CVGVFGEVTLVRKIDTNHLYVMKTIYKCVG 570
G FG V ++ +K I + + VT ++ ++ + G
Sbjct: 42 GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA-----LLWKVGAGGG 96
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDY-IPGGDLMSLLIKKGIFEEPLARFYIA 629
G + L+ +T V++ +P DL + +KG E +R +
Sbjct: 97 HPGVIRLLDWFETQ----------EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
++ A++ H G +HRDIK +NILID G KL DFG H+ Y
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGA---LLHDEPYTD------ 197
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR 748
GT Y PE + R
Sbjct: 198 -----------FDGTR----------------------------------VYSPPEWISR 212
Query: 749 TGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
Y WS+G++LY+M+ G PF E +++ E LH P A +SP+
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAE--LHFP--AHVSPDCCA 262
Query: 808 LILQ-LCTGADKRLGKNASEVKAHPFF 833
LI + L R + E+ P+
Sbjct: 263 LIRRCLAPKPSSRP--SLEEILLDPWM 287
Score = 35.4 bits (82), Expect = 0.073
Identities = 12/74 (16%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 82 IDTNHLYAMKTLRKADVLKR---NQVAHVKAERDILAEADNEW----VVKLYYSFQDKDN 134
+ A+K + + VL + E +L + V++L F+ ++
Sbjct: 53 LTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEG 112
Query: 135 LYFVMDY-IPGEKL 147
V++ +P + L
Sbjct: 113 FMLVLERPLPAQDL 126
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 128 bits (323), Expect = 2e-32
Identities = 59/332 (17%), Positives = 105/332 (31%), Gaps = 76/332 (22%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK-----CVGAFGEVTLVRK 580
++ L V + + + G F V + + + Y +K + EV ++K
Sbjct: 24 ELGELRLRVRRVLAE--GGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKK 81
Query: 581 IDTNHLYVMK------------GSPHNNLYFVMDYIPGG--DLMSLLIKKGIFEEPLARF 626
+ + H +++ + + + G + + + +G
Sbjct: 82 L-SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 627 YIAELTCAVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+ AV+ +H+ IHRD+K +N+L+ G IKL DFG T
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS----------- 189
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPE 744
P WS E R TP Y PE
Sbjct: 190 --------HYPDYSWSAQRRALV---------------EEEITRN------TTPMYRTPE 220
Query: 745 VL---LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
++ + D W++G ILY + PF + +++N IP
Sbjct: 221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVN--GKYSIPPHDTQ 274
Query: 802 SPEGADLILQ-LCTGADKRLGKNASEVKAHPF 832
LI L ++RL + +EV
Sbjct: 275 YTVFHSLIRAMLQVNPEERL--SIAEVVHQLQ 304
Score = 39.7 bits (93), Expect = 0.003
Identities = 7/53 (13%), Positives = 21/53 (39%)
Query: 434 SQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
S ++ + + ++ + + + G F V + + + YA+K +
Sbjct: 11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS 63
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 117 bits (294), Expect = 5e-29
Identities = 81/333 (24%), Positives = 125/333 (37%), Gaps = 107/333 (32%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKID--TNHLYVMKGSPHNN---- 596
G G V + T ++ + + K + N + VM+ + + N
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQM--------NLQQQPKKELIINEILVMRENKNPNIVNY 82
Query: 597 ---------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA----ELTCAVESVHKMGF 643
L+ VM+Y+ GG L + + + +E IA E A+E +H
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDV-VTETCMDEG----QIAAVCRECLQALEFLHSNQV 137
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRDIK DNIL+ DG +KLTDFG C
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFC---------------------------------- 163
Query: 704 PGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
Q + P + +R ++VGTP ++APEV+ R Y D WS+G++
Sbjct: 164 -AQ--------ITPEQSKR---------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEA--------QLSPEGADLILQ-LCT 814
EM+ G PP+L E + + I +LS D + + L
Sbjct: 206 AIEMIEGEPPYL----NENPLRAL-----YLIATNGTPELQNPEKLSAIFRDFLNRCLEM 256
Query: 815 GADKRLGKNASEVKAHPFFSNVDFEKGVRTLTP 847
+KR +A E+ H F K + +LTP
Sbjct: 257 DVEKR--GSAKELLQHQFLKIA---KPLSSLTP 284
Score = 34.2 bits (79), Expect = 0.16
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ T A++ + ++ ++ + + E ++ E N +V S+ D L+ VM+Y
Sbjct: 42 VATGQEVAIR---QMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98
Query: 142 IPG 144
+ G
Sbjct: 99 LAG 101
Score = 33.4 bits (77), Expect = 0.31
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
K + + + IG GA G V + T A++ +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM 53
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 116 bits (293), Expect = 6e-29
Identities = 52/312 (16%), Positives = 101/312 (32%), Gaps = 83/312 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY------KCVGAF-GEVTLVRKIDTNHLYVMK----- 590
G F V +T + F E +++ + H +++
Sbjct: 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ--HPNIVRFYDSW 94
Query: 591 ---GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG--FIH 645
+ V + + G L + L + + + + R + ++ ++ +H IH
Sbjct: 95 ESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIH 154
Query: 646 RDIKPDNILID-RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
RD+K DNI I G +K+ D GL T + ++ GT
Sbjct: 155 RDLKCDNIFITGPTGSVKIGDLGLAT-----------LKRASFAK--AV-------IGT- 193
Query: 705 GQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
P ++APE+ Y + D ++ G+ +
Sbjct: 194 ---------------------------------PEFMAPEM-YEEKYDESVDVYAFGMCM 219
Query: 765 YEMLVGSPPFLANTSAETQYKVINWESCLHIPA--EAQLSPEGADLILQ-LCTGADKRLG 821
EM P+ +A Y+ + PA + PE ++I + D+R
Sbjct: 220 LEMATSEYPYSECQNAAQIYRRVTSG---VKPASFDKVAIPEVKEIIEGCIRQNKDERY- 275
Query: 822 KNASEVKAHPFF 833
+ ++ H FF
Sbjct: 276 -SIKDLLNHAFF 286
Score = 33.9 bits (78), Expect = 0.21
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQD----KDNLYFV 138
+T A L+ + K ++ K E ++L + +V+ Y S++ K + V
Sbjct: 49 ETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107
Query: 139 MDYIPG 144
+ +
Sbjct: 108 TELMTS 113
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 118 bits (298), Expect = 8e-29
Identities = 67/407 (16%), Positives = 119/407 (29%), Gaps = 107/407 (26%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRK-IDT----NHLYV 588
++ I K V L R T ++ I + VT ++ + NH +
Sbjct: 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
Query: 589 MK--GS--PHNNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM 641
+ + N L+ V ++ G DL+ G E + + + A++ +H M
Sbjct: 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG-MNELAIAYILQGVLKALDYIHHM 147
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
G++HR +K +ILI DG + L+
Sbjct: 148 GYVHRSVKASHILISVDGKVYLSGLRSNL------------------------------- 176
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWS 759
+ +R+ V +++PEVL + GY D +S
Sbjct: 177 --------------SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS 222
Query: 760 VGVILYEMLVGSPPFL------------------------------------------AN 777
VG+ E+ G PF +
Sbjct: 223 VGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLS 282
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNV 836
S T + P SP + Q L D R +AS + H FF +
Sbjct: 283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP--SASTLLNHSFFKQI 340
Query: 837 DFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNSDSMLDELSDE 883
++ P + + + D + + L+EL +
Sbjct: 341 --KRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLVTNLEELEVD 385
Score = 34.9 bits (80), Expect = 0.10
Identities = 7/63 (11%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T ++ + + V ++ E + ++ +V +F + L+ V +
Sbjct: 49 KPTGEYVTVRRI-NLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 107
Query: 142 IPG 144
+
Sbjct: 108 MAY 110
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 114 bits (288), Expect = 3e-28
Identities = 77/328 (23%), Positives = 117/328 (35%), Gaps = 84/328 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRK-IDT----NHLYVMK--GS--P 593
G FGEV T + +K I A E+ +++ I + YV K GS
Sbjct: 33 GSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 91
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L+ +M+Y+ GG + LL + G +E + E+ ++ +H IHRDIK N+
Sbjct: 92 DTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 150
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+ G +KL DFG+ Q ++++
Sbjct: 151 LLSEHGEVKLADFGVAG-----------QLTDTQIKRNTF-------------------- 179
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
VGTP ++APEV+ ++ Y D WS+G+ E+ G PP
Sbjct: 180 ---------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
Query: 774 FLANTSAETQYKVINWESCLHIPA------EAQLSPEGADLILQ-LCTGADKRLGKNASE 826
S KV+ IP E S + + L R A E
Sbjct: 219 H----SELHPMKVL-----FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP--TAKE 267
Query: 827 VKAHPFFSNVDFEKGVRTLTPPHIPRIQ 854
+ H F K LT I R +
Sbjct: 268 LLKHKFILRN--AKKTSYLT-ELIDRYK 292
Score = 35.4 bits (82), Expect = 0.073
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 82 IDTNHLYAMKT--LRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
T + A+K L +A+ +++ ++ E +L++ D+ +V K Y S+ L+ +M
Sbjct: 44 NRTQKVVAIKIIDLEEAE----DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99
Query: 140 DYIPG 144
+Y+ G
Sbjct: 100 EYLGG 104
Score = 33.8 bits (78), Expect = 0.19
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 434 SQKESNYIRLKRAKMD-KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
S +S ++ K D + +F K++ IG G+FGEV T + A+K I
Sbjct: 4 SPVQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII 55
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 114 bits (288), Expect = 5e-28
Identities = 71/329 (21%), Positives = 122/329 (37%), Gaps = 99/329 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKID--TNHLYVMKGSPHNN---- 596
G G V L R+ + +K + ++ ++ + N + +M+ H N
Sbjct: 56 GSTGIVCLAREKHSGRQVAVKMM--------DLRKQQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 597 ---------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
L+ +M+++ GG L + + + E + A+ +H G IHRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDI-VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IK D+IL+ DG +KL+DFG C Q
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFC-----------------------------------AQ- 190
Query: 708 CRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
+ +R SLVGTP ++APEV+ R+ Y D WS+G+++ EM
Sbjct: 191 -------ISKDVPKR---------KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAE--------AQLSPEGADLILQ-LCTGADK 818
+ G PP+ +++ + + + ++SP D + + L +
Sbjct: 235 VDGEPPYF----SDSPVQAM-----KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 819 RLGKNASEVKAHPFFSNVDFEKGVRTLTP 847
R A E+ HPF L P
Sbjct: 286 R--ATAQELLDHPFLLQT---GLPECLVP 309
Score = 36.2 bits (84), Expect = 0.041
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ A+K D+ K+ + + E I+ + + VV++Y S+ + L+ +M++
Sbjct: 67 KHSGRQVAVK---MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123
Query: 142 IPG 144
+ G
Sbjct: 124 LQG 126
Score = 32.7 bits (75), Expect = 0.46
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ + IG G+ G V L R+ + A+K +
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM 78
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 111 bits (280), Expect = 5e-27
Identities = 68/320 (21%), Positives = 110/320 (34%), Gaps = 108/320 (33%)
Query: 570 GAFGEVTLVRKIDTNHLY-------------------VMKGSPHNN-------------L 597
G++G V +T + +M+ + L
Sbjct: 40 GSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDL 99
Query: 598 YFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+ VM+Y G + ++ ++ E + +E +H M IHRDIK NIL++
Sbjct: 100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN 159
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
+GH KL DFG+ GQ L
Sbjct: 160 TEGHAKLADFGVA-----------------------------------GQ--------LT 176
Query: 717 PLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLA 776
+R ++++GTP ++APEV+ GY + D WS+G+ EM G PP+
Sbjct: 177 DTMAKR---------NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY-- 225
Query: 777 NTSAETQYKVINWESCLHIP--------AEAQLSPEGADLILQ-LCTGADKRLGKNASEV 827
+ + I IP S D + Q L ++R A+++
Sbjct: 226 --ADIHPMRAI-----FMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR--ATATQL 276
Query: 828 KAHPFFSNVDFEKGVRTLTP 847
HPF + KGV L
Sbjct: 277 LQHPFVRSA---KGVSILRD 293
Score = 35.0 bits (81), Expect = 0.098
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+T + A+K + + + E I+ + D+ VVK Y S+ +L+ VM+Y
Sbjct: 51 KETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105
Query: 142 IPG 144
Sbjct: 106 CGA 108
Score = 32.7 bits (75), Expect = 0.54
Identities = 8/56 (14%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 430 RKMLSQKESNYIRLKRAKMD-KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ +++ + + +F ++ +G G++G V +T + A+K +
Sbjct: 7 LRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 110 bits (278), Expect = 8e-27
Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 66/251 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRK-IDT----NHLYVMK--GS--P 593
G V +K I + + K I +H ++ S
Sbjct: 26 GATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV 84
Query: 594 HNNLYFVMDYIPGG---DLM-----SLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIH 645
+ L+ VM + GG D++ K G+ +E + E+ +E +HK G IH
Sbjct: 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIH 144
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
RD+K NIL+ DG +++ DFG+
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSA----------------------------------- 169
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVIL 764
+ + + R + VGTP ++APEV+ + GY D WS G+
Sbjct: 170 ----FLATGGDITRNKVR--------KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 765 YEMLVGSPPFL 775
E+ G+ P+
Sbjct: 218 IELATGAAPYH 228
Score = 36.5 bits (85), Expect = 0.035
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 6/65 (9%)
Query: 82 IDTNHLYAMKT--LRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
A+K L K + + E +++ + +V Y SF KD L+ VM
Sbjct: 37 APKKEKVAIKRINLEKCQ----TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92
Query: 140 DYIPG 144
+ G
Sbjct: 93 KLLSG 97
Score = 32.7 bits (75), Expect = 0.48
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+++ + + IG GA V A+K I
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI 48
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 105 bits (265), Expect = 4e-25
Identities = 67/349 (19%), Positives = 122/349 (34%), Gaps = 120/349 (34%)
Query: 550 LVRKIDTNHLYVMKTIYKCV--GAFGEVTLVRKIDTNHLY-------------------- 587
+ R +D N ++ I + GAFG+V + +T L
Sbjct: 11 VRRDLDPNEVW---EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 588 -VMKGSPHNN-------------LYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELT 632
++ H L+ ++++ PGG + +++ EP + ++
Sbjct: 68 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
A+ +H IHRD+K N+L+ +G I+L DFG+ ++ ++DS
Sbjct: 128 EALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA-----------KNLKTLQKRDS 176
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR---- 748
+GTP ++APEV++
Sbjct: 177 F-----------------------------------------IGTPYWMAPEVVMCETMK 195
Query: 749 -TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIP--------AEA 799
T Y D WS+G+ L EM PP + +V+ L I +
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPP-HHELNP---MRVL-----LKIAKSDPPTLLTPS 246
Query: 800 QLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTP 847
+ S E D + L + R +A+++ HPF S++ + L
Sbjct: 247 KWSVEFRDFLKIALDKNPETR--PSAAQLLEHPFVSSI---TSNKALRE 290
Score = 37.3 bits (87), Expect = 0.019
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+T L A K + + ++ E +ILA D+ ++VKL ++ L+ ++++
Sbjct: 41 KETGALAAAKVI---ETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97
Query: 142 IPG 144
PG
Sbjct: 98 CPG 100
Score = 34.2 bits (79), Expect = 0.17
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
++ + +G GAFG+V + +T L A K I
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVI 52
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 105 bits (263), Expect = 1e-24
Identities = 74/361 (20%), Positives = 126/361 (34%), Gaps = 104/361 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVG-----VFGEVTLVRKIDTNHLYVMKTIYKCVG 570
G +G+V R + T L +K + G + E+ +++K ++H + Y G
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEINMLKKY-SHHRNIAT--YY--G 88
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFY 627
AF + + L+ VM++ G DL+ K +E +
Sbjct: 89 AF-------------IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYI 134
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
E+ + +H+ IHRDIK N+L+ + +KL DFG+ Q +
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA-----------QLDRTV 183
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL 747
GR+++ +GTP ++APEV+
Sbjct: 184 GRRNTF-----------------------------------------IGTPYWMAPEVIA 202
Query: 748 R-----TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIP------ 796
Y D WS+G+ EM G+PP L + + + IP
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPP-LCDMHP---MRAL-----FLIPRNPAPR 253
Query: 797 -AEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQ 854
+ S + I L +R ++ HPF + E+ VR HI R +
Sbjct: 254 LKSKKWSKKFQSFIESCLVKNHSQR--PATEQLMKHPFIRDQPNERQVRIQLKDHIDRTK 311
Query: 855 N 855
Sbjct: 312 K 312
Score = 35.8 bits (83), Expect = 0.053
Identities = 13/56 (23%), Positives = 25/56 (44%)
Query: 429 MRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M + + I L + +F ++ +G G +G+V R + T L A+K +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM 57
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 103 bits (259), Expect = 2e-24
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 509 KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC 568
T+ G FG+V + T H +K + + +KI + + + I +
Sbjct: 17 DTLGV--GTFGKVKIGEHQLTGHKVAVKILNR-----------QKIRSLDV--VGKIKR- 60
Query: 569 VGAFGEVTLVRKIDTNH---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLA 624
E+ ++ H LY V+ + + VM+Y+ GG+L + K G EE A
Sbjct: 61 -----EIQNLKLFRHPHIIKLYQVISTP--TDFFMVMEYVSGGELFDYICKHGRVEEMEA 113
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
R ++ AV+ H+ +HRD+KP+N+L+D + K+ DFGL
Sbjct: 114 RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
Score = 69.5 bits (171), Expect = 5e-13
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 736 GTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
G+PNY APEV+ Y D WS GVILY +L G+ PF K+ +
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV--FY 229
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFF 833
IP L+ A L++ L KR +++ H +F
Sbjct: 230 IPEY--LNRSVATLLMHMLQVDPLKRA--TIKDIREHEWF 265
Score = 42.6 bits (101), Expect = 3e-04
Identities = 18/69 (26%), Positives = 31/69 (44%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T H A+K L + + + V +K E L + ++KLY + + VM+Y
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 142 IPGEKLIPY 150
+ G +L Y
Sbjct: 93 VSGGELFDY 101
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 102 bits (256), Expect = 5e-24
Identities = 61/276 (22%), Positives = 101/276 (36%), Gaps = 93/276 (33%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L V +++ DL LL + +G E A+ ++ +L + H +HRD+KP N+
Sbjct: 73 KRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
LI+R+G +K+ DFGL R
Sbjct: 132 LINREGELKIADFGL---------------------------------------ARAFGI 152
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSP 772
P++ H+ + T Y AP+VL+ Y+ D WSVG I EM+ G+P
Sbjct: 153 PVRKY------THE-------IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
Query: 773 PFLANTSAE------------------------------TQYKVINWESCLHIPAEAQLS 802
F + A+ T Y+ + WES + L
Sbjct: 200 LFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWES--FLKG---LD 254
Query: 803 PEGADLILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
G DL+ ++ ++R+ A + H +F +
Sbjct: 255 ESGIDLLSKMLKLDPNQRI--TAKQALEHAYFKENN 288
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 102 bits (256), Expect = 7e-24
Identities = 59/296 (19%), Positives = 89/296 (30%), Gaps = 93/296 (31%)
Query: 595 NNLYFVMDYIPGGDLMSLL------IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
N L V +++ DL + E L +++ +L + H+ +HRD+
Sbjct: 76 NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDL 134
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N+LI++ G +KL DFGL
Sbjct: 135 KPQNLLINKRGQLKLGDFGL---------------------------------------A 155
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEM 767
R P+ + V T Y AP+VL+ Y+ D WS G IL EM
Sbjct: 156 RAFGIPVNTF------SSE-------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 768 LVGSPPFLANTSAE------------------------------TQYKVINWESCLHIPA 797
+ G P F E Q + L
Sbjct: 203 ITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT 262
Query: 798 EAQLSPEGADLILQLCTG-ADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPR 852
+ L D + L D RL +A + HP+F+ + H
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRL--SAKQALHHPWFAEYYHHASMGGSRSHHHHH 316
Score = 30.2 bits (69), Expect = 3.3
Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ + F +++ +G G + V T A+K +
Sbjct: 2 SSSSQ--FKQLEKLGNGTYATVYKGLNKTTGVYVALKEV 38
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 101 bits (254), Expect = 1e-23
Identities = 61/277 (22%), Positives = 96/277 (34%), Gaps = 94/277 (33%)
Query: 595 NNLYFVMDYIPGGDLMSLL--IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
N LY V +++ DL + PL + Y+ +L + H +HRD+KP N
Sbjct: 75 NKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+LI+ +G IKL DFGL R
Sbjct: 134 LLINTEGAIKLADFGL---------------------------------------ARAFG 154
Query: 713 SPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGS 771
P++ H+ V T Y APE+LL Y+ D WS+G I EM+
Sbjct: 155 VPVRTY------THE-------VVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 772 PPFLANTSAE------------------------------TQYKVINWESCLHIPAEAQL 801
F ++ + ++ ++ +P L
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSK--VVPP---L 256
Query: 802 SPEGADLILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
+G L+ Q+ +KR+ +A AHPFF +V
Sbjct: 257 DEDGRSLLSQMLHYDPNKRI--SAKAALAHPFFQDVT 291
Score = 30.6 bits (70), Expect = 2.6
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M+ F K++ IG G +G V R T + A+K I
Sbjct: 2 MEN--FQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 100 bits (251), Expect = 4e-23
Identities = 52/285 (18%), Positives = 88/285 (30%), Gaps = 85/285 (29%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L+ V +Y ++ L + E L + + AV HK IHRD+KP+NI
Sbjct: 75 RRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENI 133
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
LI + IKL DFG R +
Sbjct: 134 LITKHSVIKLCDFGF---------------------------------------ARLLTG 154
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSP 772
P + + V T Y +PE+L+ T Y D W++G + E+L G P
Sbjct: 155 PSDYY------DDE-------VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201
Query: 773 PFLANTSAETQYKVI---------NWESCLHIPAEAQ------------------LSPEG 805
+ + + Y + + + + +S
Sbjct: 202 LWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPA 261
Query: 806 ADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPH 849
L+ +RL ++ HP+F N+ + +
Sbjct: 262 LGLLKGCLHMDPTERL--TCEQLLHHPYFENIREIEDLAKEHDKP 304
Score = 32.9 bits (76), Expect = 0.41
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M+K + KI IG G++G V R DT + A+K
Sbjct: 2 MEK--YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF 36
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 99.6 bits (249), Expect = 6e-23
Identities = 63/277 (22%), Positives = 98/277 (35%), Gaps = 94/277 (33%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L V +++ DL +L K ++ + Y+ +L V H+ +HRD+KP N+
Sbjct: 92 RCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
LI+ DG +KL DFGL R
Sbjct: 151 LINSDGALKLADFGL---------------------------------------ARAFGI 171
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSP 772
P++ H+ V T Y AP+VL+ Y+ D WS+G I EM+ G P
Sbjct: 172 PVRSY------THE-------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 773 PFLANTSAE-------------------------------TQYKVINWESCLHIPAEAQL 801
F T + ++ W S IP
Sbjct: 219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSS--IIPG---F 273
Query: 802 SPEGADLILQLCTGA-DKRLGKNASEVKAHPFFSNVD 837
EG DL+ + +KR+ +A + HP+F ++D
Sbjct: 274 CQEGIDLLSNMLCFDPNKRI--SARDAMNHPYFKDLD 308
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 98.1 bits (245), Expect = 9e-23
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 536 KTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT--------NH-- 585
KT+ + G F +V L T +K I K + + +I+ H
Sbjct: 19 KTLGE--GSFAKVKLAYHTTTGQKVALKIINK--KVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 586 ---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM 641
LY V+K + + V++Y G +L ++++ E AR + ++ AVE H+
Sbjct: 75 IIKLYDVIKSK--DEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
+HRD+KP+N+L+D ++K+ DFGL
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163
Score = 70.3 bits (173), Expect = 3e-13
Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 736 GTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
G+PNY APEV+ Y D WS GVILY ML PF + + N
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV--YT 230
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFF 833
+P LSP A LI + L R+ + E+ +F
Sbjct: 231 LPKF--LSPGAAGLIKRMLIVNPLNRI--SIHEIMQDDWF 266
Score = 44.9 bits (107), Expect = 5e-05
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T A+K + K + K + ++ E L + ++KLY + KD + V++Y
Sbjct: 35 TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94
Query: 142 IPGE 145
E
Sbjct: 95 AGNE 98
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 97.6 bits (244), Expect = 2e-22
Identities = 56/271 (20%), Positives = 88/271 (32%), Gaps = 84/271 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L V ++ DL G + + + ++ +L + H +HRD+KP N+
Sbjct: 74 KKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
LI+R+G +KL +FGL R
Sbjct: 133 LINRNGELKLANFGL---------------------------------------ARAFGI 153
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSP 772
P++ + V T Y P+VL Y+ D WS G I E+
Sbjct: 154 PVRCY------SAE-------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200
Query: 773 PFLANTSAETQYKVI----------NWESCLHIP----------------AEAQLSPEGA 806
P + Q K I W S +P +L+ G
Sbjct: 201 PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGR 260
Query: 807 DLILQLCTG-ADKRLGKNASEVKAHPFFSNV 836
DL+ L +R+ +A E HP+FS+
Sbjct: 261 DLLQNLLKCNPVQRI--SAEEALQHPYFSDF 289
Score = 30.2 bits (69), Expect = 3.1
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M K + K++ IG G +G V + +T+ + A+K +
Sbjct: 1 MQK--YEKLEKIGEGTYGTVFKAKNRETHEIVALKRV 35
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 98.2 bits (245), Expect = 2e-22
Identities = 53/263 (20%), Positives = 98/263 (37%), Gaps = 58/263 (22%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC----VGAF-GEVTLVR 579
R + L + + K G FG+ V +T + VMK + + F EV ++R
Sbjct: 5 RIFRPSDLIHGEVLGK--GCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62
Query: 580 KIDTNH-----LY--VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
++ H + K L F+ +YI GG L ++ R A+
Sbjct: 63 CLE--HPNVLKFIGVLYKDKR---LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117
Query: 633 CA-VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ + +H M IHRD+ N L+ + ++ + DFGL ++
Sbjct: 118 ASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL---------ARLMVDE------- 161
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+P R ++ R +++VG P ++APE++ Y
Sbjct: 162 ----------------------KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199
Query: 752 TQLCDWWSVGVILYEMLVGSPPF 774
+ D +S G++L E++
Sbjct: 200 DEKVDVFSFGIVLCEIIGRVNAD 222
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 98.1 bits (245), Expect = 3e-22
Identities = 64/277 (23%), Positives = 96/277 (34%), Gaps = 94/277 (33%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+L V +Y+ DL L I + ++ +L + H+ +HRD+KP N+
Sbjct: 73 KSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL 131
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
LI+ G +KL DFGL R +
Sbjct: 132 LINERGELKLADFGL---------------------------------------ARAKSI 152
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSP 772
P K +++ V T Y P++LL T Y+ D W VG I YEM G P
Sbjct: 153 PTKTY------DNE-------VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRP 199
Query: 773 PFLANTSAE-------------------------------TQYKVINWESCLHIPAEAQL 801
F +T E +Y+ S H P L
Sbjct: 200 LFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLS--HAPR---L 254
Query: 802 SPEGADLILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
+GADL+ +L R+ +A + HPFF ++
Sbjct: 255 DSDGADLLTKLLQFEGRNRI--SAEDAMKHPFFLSLG 289
Score = 32.6 bits (75), Expect = 0.61
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M+ +IK+ +G G + V + T++L A+K I
Sbjct: 1 MET--YIKLDKLGEGTYATVYKGKSKLTDNLVALKEI 35
Score = 28.7 bits (65), Expect = 8.3
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 68 LGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDI--LAEADNEWVVKL 125
LGE T + + T++L A+K +R L+ + A A R++ L + + +V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 126 YYSFQDKDNLYFVMDYI 142
+ + +L V +Y+
Sbjct: 66 HDIIHTEKSLTLVFEYL 82
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 98.1 bits (245), Expect = 3e-22
Identities = 57/278 (20%), Positives = 95/278 (34%), Gaps = 88/278 (31%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ + +Y DL + K + + ++ +L V H +HRD+KP N+L
Sbjct: 106 HRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLL 164
Query: 655 ID-----RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
+ +K+ DFGL R
Sbjct: 165 LSVSDASETPVLKIGDFGL---------------------------------------AR 185
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEML 768
P++ H+ + T Y PE+LL Y+ D WS+ I EML
Sbjct: 186 AFGIPIRQF------THE-------IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
Query: 769 VGSPPFLANTSAETQYKVI---------NWESCLHIPA-----------------EAQLS 802
+ +P F ++ + +K+ W +P A L
Sbjct: 233 MKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD 292
Query: 803 PEGADLILQLCTG-ADKRLGKNASEVKAHPFFSNVDFE 839
EG DL+ + KR+ +A HP+FS+ DF+
Sbjct: 293 DEGLDLLTAMLEMDPVKRI--SAKNALEHPYFSHNDFD 328
Score = 29.9 bits (68), Expect = 4.1
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+D+ + +I +G G +GEV TN A+K I
Sbjct: 32 SIDR--YRRITKLGEGTYGEVYKAIDTVTNETVAIKRI 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 97.7 bits (244), Expect = 4e-22
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 28/169 (16%)
Query: 509 KTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC 568
+T+ + G+FG+V L T +K I + + + + + + +
Sbjct: 15 ETLGE--GSFGKVKLATHYKTQQKVALKFISR-----------QLLKKSDM--HMRVER- 58
Query: 569 VGAFGEVTLVRKIDTNH---LY-VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLA 624
E++ ++ + H LY V+ + V++Y GG+L +++K E
Sbjct: 59 -----EISYLKLLRHPHIIKLYDVITTPTD--IVMVIEYA-GGELFDYIVEKKRMTEDEG 110
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 673
R + ++ CA+E H+ +HRD+KP+N+L+D + ++K+ DFGL
Sbjct: 111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159
Score = 74.6 bits (184), Expect = 2e-14
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 25/160 (15%)
Query: 736 GTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
G+PNY APEV+ Y D WS G++LY MLVG PF KV +
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YV 226
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRI 853
+P LSP LI + + +R+ E++ P+F+ ++P
Sbjct: 227 MPDF--LSPGAQSLIRRMIVADPMQRI--TIQEIRRDPWFNV-------------NLPDY 269
Query: 854 QNSMDTSNFDPVDPDKLRNSDSML----DELSDELKSPFH 889
M+ D + + D + + L+S +
Sbjct: 270 LRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDEN 309
Score = 42.7 bits (101), Expect = 4e-04
Identities = 14/64 (21%), Positives = 27/64 (42%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
T A+K + + + K + V+ E L + ++KLY ++ V++Y
Sbjct: 31 YKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90
Query: 142 IPGE 145
GE
Sbjct: 91 AGGE 94
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 100 bits (250), Expect = 7e-22
Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 60/186 (32%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L A Y+ E+ A+ +H +G ++ D+KP+NI++
Sbjct: 160 YIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+ +KL D G + R Y GTPG
Sbjct: 218 EQ-LKLIDLGAVS--RINSFGYLY--------------------GTPG------------ 242
Query: 718 LERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+ APE+ +RTG T D ++VG L + + P
Sbjct: 243 ----------------------FQAPEI-VRTGPTVATDIYTVGRTLAALTLDLPTRNGR 279
Query: 778 TSAETQ 783
Sbjct: 280 YVDGLP 285
Score = 30.2 bits (68), Expect = 4.0
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 4/96 (4%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSG---PGSTGSPSPIPPTRPAPLQA- 204
P P + P S +++ + +P P + A
Sbjct: 338 PRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPTDVAAS 397
Query: 205 WSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSP 240
+QPV + S+++ S
Sbjct: 398 VLQATVLSQPVQTLDSLRAARHGALDADGVDFSESV 433
Score = 28.7 bits (64), Expect = 9.9
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDN-----LYFVMDYIP 143
+K L + A AER LAE + +V+++ + D Y VM+Y+
Sbjct: 110 VLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVG 167
Query: 144 GEKL 147
G+ L
Sbjct: 168 GQSL 171
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 95.3 bits (238), Expect = 3e-21
Identities = 54/273 (19%), Positives = 88/273 (32%), Gaps = 92/273 (33%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+N+ V D++ DL ++ + + Y+ +E +H+ +HRD+KP+N+
Sbjct: 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNL 143
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D +G +KL DFGL + S
Sbjct: 144 LLDENGVLKLADFGL---------------------------------------AKSFGS 164
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSP 772
P + HQ V T Y APE+L Y D W+VG IL E+L+ P
Sbjct: 165 PNRAY------THQ-------VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211
Query: 773 PFLANTSAE-----------------------------TQYKVINWESCLHIPAEAQLSP 803
++ + + I
Sbjct: 212 FLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS-----AAGD 266
Query: 804 EGADLILQLCT-GADKRLGKNASEVKAHPFFSN 835
+ DLI L R+ A++ +FSN
Sbjct: 267 DLLDLIQGLFLFNPCARI--TATQALKMKYFSN 297
Score = 31.8 bits (73), Expect = 1.1
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDI--LAEADNEWVVKLYYSFQDKDNLYF 137
R +TN + A+K ++ + + A R+I L E + ++ L +F K N+
Sbjct: 30 RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89
Query: 138 VMDYIP 143
V D++
Sbjct: 90 VFDFME 95
Score = 31.0 bits (71), Expect = 2.0
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+++ + + K+ +G G F V R +TN + A+K I
Sbjct: 6 KSRAKR--YEKLDFLGEGQFATVYKARDKNTNQIVAIKKI 43
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 94.3 bits (235), Expect = 3e-21
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMK--------GSPH 594
G+ G+V + T + +K + C A EV L + + ++++ +
Sbjct: 29 GINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA-SQCPHIVRIVDVYENLYAGR 87
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+KP+N
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 653 ILI---DRDGHIKLTDFGL 668
+L + +KLTDFG
Sbjct: 148 LLYTSKRPNAILKLTDFGF 166
Score = 70.0 bits (172), Expect = 4e-13
Identities = 28/109 (25%), Positives = 39/109 (35%), Gaps = 26/109 (23%)
Query: 741 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN------------ 788
A E Y + CD WS+GVI+Y +L G PPF +N +
Sbjct: 166 FAKETT-GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224
Query: 789 -WESCLHIPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSN 835
W +S E LI L T +R+ +E HP+
Sbjct: 225 EWSE---------VSEEVKMLIRNLLKTEPTQRM--TITEFMNHPWIMQ 262
Score = 42.7 bits (101), Expect = 4e-04
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 441 IRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKI 500
+++K+ + + + +G+G G+V + T +A+K + C A EV L +
Sbjct: 8 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA 67
Score = 38.0 bits (89), Expect = 0.010
Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQD----KDNLYFV 138
T +A+K L+ +R E ++ + +V++ +++ + L V
Sbjct: 42 TQEKFALKMLQDCPKARR--------EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 93
Query: 139 MDYIPG 144
M+ + G
Sbjct: 94 MECLDG 99
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 95.0 bits (237), Expect = 3e-21
Identities = 55/274 (20%), Positives = 95/274 (34%), Gaps = 85/274 (31%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
Y V +++ ++ L + + + + Y+ ++ + H IHRDIKP+NI
Sbjct: 97 KRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENI 155
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+ + G +KL DFG R + +
Sbjct: 156 LVSQSGVVKLCDFGF---------------------------------------ARTLAA 176
Query: 714 PLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSP 772
P + + + V T Y APE+L+ Y + D W++G ++ EM +G P
Sbjct: 177 PGEVY------DDE-------VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP 223
Query: 773 PFLANTSAETQYKVI---------NWESCLHIPAEA------------------QLSPEG 805
F ++ + Y ++ + E P A +LS
Sbjct: 224 LFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVV 283
Query: 806 ADLILQLCTGA-DKRLGKNASEVKAHPFFSNVDF 838
DL + DKR +E+ H FF F
Sbjct: 284 IDLAKKCLHIDPDKRP--FCAELLHHDFFQMDGF 315
Score = 33.0 bits (76), Expect = 0.43
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M+K + + +G G++G V R DT + A+K
Sbjct: 23 SMEK--YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 91.9 bits (229), Expect = 2e-20
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+ Y VM+YI G L + G A + ++ ++ H M +HRDIKP
Sbjct: 80 DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKP 139
Query: 651 DNILIDRDGHIKLTDFGL 668
NILID + +K+ DFG+
Sbjct: 140 QNILIDSNKTLKIFDFGI 157
Score = 51.5 bits (124), Expect = 5e-07
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
++GT Y +PE + D +S+G++LYEMLVG PPF T+ K I
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ 226
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 91.9 bits (229), Expect = 2e-20
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 658 DGHIKLTDFGL 668
+K+ DFG+
Sbjct: 152 TNAVKVMDFGI 162
Score = 49.6 bits (119), Expect = 2e-06
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYK 785
+++GT Y++PE D +S+G +LYE+L G PPF ++ Y+
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 91.2 bits (227), Expect = 4e-20
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
G LY M I G DL ++L ++G P A + ++ A+++ H G HRD+KP
Sbjct: 103 GEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP 162
Query: 651 DNILIDRDGHIKLTDFGL 668
+NIL+ D L DFG+
Sbjct: 163 ENILVSADDFAYLVDFGI 180
Score = 53.4 bits (129), Expect = 1e-07
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSA 780
+ VGT Y+APE + T D +++ +LYE L GSPP+ + +
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS 241
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 88.9 bits (221), Expect = 2e-19
Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 54/183 (29%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA-VESVHKMGFIHRDIKPDNIL 654
L V + G L L E IA T ++ +H IHRD+K +NI
Sbjct: 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ D +K+ DFGL T S ++
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQL------------------------------ 182
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG---YTQLCDWWSVGVILYEMLVGS 771
G+ ++APEV+ Y+ D ++ G++LYE++ G
Sbjct: 183 --------------------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 772 PPF 774
P+
Sbjct: 223 LPY 225
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 89.0 bits (221), Expect = 3e-19
Identities = 36/226 (15%), Positives = 77/226 (34%), Gaps = 60/226 (26%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-AVESVHKMGFIHRDIKPDNIL 654
+L + G L S++ I + IA+ + +H G +H+D+K N+
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF 162
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
D +G + +TDFGL + + R+D +
Sbjct: 163 YD-NGKVVITDFGLFSISGVLQAGR---------REDKLRIQ------------------ 194
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG---------YTQLCDWWSVGVILY 765
G ++APE++ + +++ D +++G I Y
Sbjct: 195 --------------------NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY 234
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
E+ PF + +++ ++ + E +D++L
Sbjct: 235 ELHAREWPFKTQPAEAIIWQMGT--GMKPNLSQIGMGKEISDILLF 278
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 87.4 bits (217), Expect = 8e-19
Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 59/185 (31%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEE--PLARFYIAELTCA--VESVHKMG--FIHRDIK 649
NL V +Y+ G L LL K G E+ R +A A + +H +HR++K
Sbjct: 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA-YDVAKGMNYLHNRNPPIVHRNLK 166
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N+L+D+ +K+ DFGL S+ S + + GTP
Sbjct: 167 SPNLLVDKKYTVKVCDFGL---------SRLKASTFLSSKSAA---------GTPE---- 204
Query: 710 CINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
++APEVL + D +S GVIL+E+
Sbjct: 205 ------------------------------WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 770 GSPPF 774
P+
Sbjct: 235 LQQPW 239
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 86.1 bits (214), Expect = 1e-18
Identities = 38/234 (16%), Positives = 74/234 (31%), Gaps = 69/234 (29%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLA-RFYIAELTCA--VESVHKMGF- 643
+ P + + ++P G L ++L + F + A L A + +H +
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA-LDMARGMAFLHTLEPL 133
Query: 644 -IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+ +++ID D +++ + +QS G
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADV---------KFSFQSPGRMY-------------- 170
Query: 703 TPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR---TGYTQLCDWWS 759
P ++APE L + + D WS
Sbjct: 171 ----------------------------------APAWVAPEALQKKPEDTNRRSADMWS 196
Query: 760 VGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
V+L+E++ PF ++ E KV IP +SP + L+ ++C
Sbjct: 197 FAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPG--ISPHVSKLM-KIC 247
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 85.1 bits (211), Expect = 1e-17
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
V++ ++Y V DY+ DL +I+ I E ++ + +L ++ +H G +HRD
Sbjct: 77 VLRADNDRDVYLVFDYM-ETDL-HAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRD 134
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+KP NIL++ + H+K+ DFGL F + + + +++ ++ T
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSF--VNIRRVTNNIPLSINENTENFDDDQPILT---- 188
Query: 708 CRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
++ V T Y APE+LL T YT+ D WS+G IL E
Sbjct: 189 -----------------DY--------VATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223
Query: 767 MLVGSPPF 774
+L G P F
Sbjct: 224 ILCGKPIF 231
Score = 30.0 bits (68), Expect = 3.8
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 456 IKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTL 496
+K +G GA+G V T + A+K K AF T
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVK---KIFDAFQNSTD 51
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 83.9 bits (208), Expect = 1e-17
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 54/183 (29%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA-VESVHKMGFIHRDIKPDNIL 654
NL V + G L L + + IA T ++ +H IHRD+K +NI
Sbjct: 105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF 164
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +K+ DFGL Q
Sbjct: 165 LHEGLTVKIGDFGL---ATVKSRWSGSQQ------------------------------- 190
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG---YTQLCDWWSVGVILYEMLVGS 771
G+ ++APEV+ ++ D +S G++LYE++ G
Sbjct: 191 ----------------VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
Query: 772 PPF 774
P+
Sbjct: 235 LPY 237
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 83.6 bits (207), Expect = 1e-17
Identities = 38/198 (19%), Positives = 64/198 (32%), Gaps = 67/198 (33%)
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA----------VESVHKMG 642
L+ V DY G L L + + E + + +A L+ A V + K
Sbjct: 72 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LA-LSTASGLAHLHMEIVGTQGKPA 128
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
HRD+K NIL+ ++G + D GL + + S D
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGL---------AVRHDSATDTIDIAP---------- 169
Query: 703 TPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG------YTQLCD 756
+ VGT Y+APEVL + + D
Sbjct: 170 -----------------------------NHRVGTKRYMAPEVLDDSINMKHFESFKRAD 200
Query: 757 WWSVGVILYEMLVGSPPF 774
+++G++ +E+
Sbjct: 201 IYAMGLVFWEIARRCSIG 218
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 83.6 bits (207), Expect = 1e-17
Identities = 35/199 (17%), Positives = 58/199 (29%), Gaps = 67/199 (33%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA----------VESVHKM 641
L+ + Y G L L + R I L+ A + K
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IV-LSIASGLAHLHIEIFGTQGKP 132
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
HRD+K NIL+ ++G + D GL + + + + +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGL---------AVMHSQSTNQLDVGN--------- 174
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL------LRTGYTQLC 755
+ VGT Y+APEVL +
Sbjct: 175 ------------------------------NPRVGTKRYMAPEVLDETIQVDCFDSYKRV 204
Query: 756 DWWSVGVILYEMLVGSPPF 774
D W+ G++L+E+
Sbjct: 205 DIWAFGLVLWEVARRMVSN 223
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 82.3 bits (204), Expect = 2e-17
Identities = 53/229 (23%), Positives = 78/229 (34%), Gaps = 72/229 (31%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA-----VESVHKMGFIHRDIKP 650
NL VM++ GG L +L K I P A + A + + IHRD+K
Sbjct: 80 NLCLVMEFARGGPLNRVLSGKRI--PPDILVNWA-VQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 651 DNILIDRDGH--------IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
NILI + +K+TDFGL R H + + G
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLA---REWHRTTKMSAAG----------------- 176
Query: 703 TPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
++APEV+ + +++ D WS GV
Sbjct: 177 ----------------------------------AYAWMAPEVIRASMFSKGSDVWSYGV 202
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+L+E+L G PF Y V + L IP+ A L+
Sbjct: 203 LLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST--CPEPFAKLMED 249
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 84.2 bits (208), Expect = 2e-17
Identities = 49/255 (19%), Positives = 78/255 (30%), Gaps = 32/255 (12%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL--------VRKIDTNHL---YVMK- 590
G F V L I MK + K + E L VR D N V++
Sbjct: 48 GHFSTVWLSWDIQGKKFVAMK-VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQL 106
Query: 591 ------GSPHNN-LYFVMDYIPGGDLMSLLIKK---GIFEEPLARFYIAELTCAVESVH- 639
+ + V + G + I K P + I ++ ++ +H
Sbjct: 107 LDDFKISGVNGTHICMVFE--VLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT 164
Query: 640 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
K IH DIKP+NIL+ + T + S +G
Sbjct: 165 KCRIIHTDIKPENILLSVNEQYIRRLAAEATEW---QRSGAPPPSGSAVSTAPATAGNFL 221
Query: 700 SQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 759
+ + + L + T Y + EVL+ +GY D WS
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHKHFT---EDIQTRQYRSLEVLIGSGYNTPADIWS 278
Query: 760 VGVILYEMLVGSPPF 774
+ +E+ G F
Sbjct: 279 TACMAFELATGDYLF 293
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 84.9 bits (210), Expect = 3e-17
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 31/177 (17%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ LY V++ D L E + + L V+ VH G +HRD+KP N L
Sbjct: 130 DELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+++D +K+ DFGL R + +E
Sbjct: 189 VNQDCSVKVCDFGLA-------------------RTVDYPENGNSQLPISPREDDMNLVT 229
Query: 715 LKPLERRRRR--EHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 768
+ +R+ H V T Y APE++L YT+ D WS+G I E+L
Sbjct: 230 FPHTKNLKRQLTGH--------VVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 29.8 bits (67), Expect = 4.4
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTL 496
+ IG G++G V + A+K K + F ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIK---KILRVFEDLID 95
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 82.9 bits (205), Expect = 7e-17
Identities = 60/277 (21%), Positives = 95/277 (34%), Gaps = 75/277 (27%)
Query: 543 GVFGEVTLVRKID--TNHLYVMKTIYKCVG----AFGEVTLVRKID-TN--HLY-VMKGS 592
G +G V ++ D + Y +K I + G A E+ L+R++ N L V
Sbjct: 32 GTYGHVYKAKRKDGKDDKDYALKQI-EGTGISMSACREIALLRELKHPNVISLQKVFLSH 90
Query: 593 PHNNLYFVMDYIPGGDLMSLL---------IKKGIFEEPLARFYIAELTCAVESVHKMGF 643
++ + DY DL ++ K + + + ++ + +H
Sbjct: 91 ADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV 149
Query: 644 IHRDIKPDNILIDRD----GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
+HRD+KP NIL+ + G +K+ D G
Sbjct: 150 LHRDLKPANILVMGEGPERGRVKIADMGF------------------------------- 178
Query: 700 SQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWW 758
R NSPLKPL V T Y APE+LL YT+ D W
Sbjct: 179 --------ARLFNSPLKPLADLDPV----------VVTFWYRAPELLLGARHYTKAIDIW 220
Query: 759 SVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHI 795
++G I E+L P F + + I
Sbjct: 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 81.3 bits (201), Expect = 1e-16
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G G+V +R T H+ +K + + ++ +D P+
Sbjct: 36 GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH--DCPYIVQCFGTF 93
Query: 595 ---NNLYFVMDYIPGG-DLMSLLIKKGIFEEPLARFYIAELTC-AVESVH-KMGFIHRDI 648
+++ M+ + + + ++ I E L + A+ + K G IHRD+
Sbjct: 94 ITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG--KMTVAIVKALYYLKEKHGVIHRDV 151
Query: 649 KPDNILIDRDGHIKLTDFG 667
KP NIL+D G IKL DFG
Sbjct: 152 KPSNILLDERGQIKLCDFG 170
Score = 55.8 bits (135), Expect = 2e-08
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Query: 735 VGTPNYIAPEVL-----LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW 789
G Y+APE + + Y D WS+G+ L E+ G P+ + +
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 790 ESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF-----SNVDFEKGVRT 844
E +P S + + + C D R +++ H F VD +
Sbjct: 245 EEPPLLPGHMGFSGDFQSFV-KDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKD 303
Query: 845 L 845
+
Sbjct: 304 V 304
Score = 37.0 bits (86), Expect = 0.022
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+R + + + + +G G G+V +R T H+ A+K +
Sbjct: 18 QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM 58
Score = 29.6 bits (67), Expect = 4.4
Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Query: 80 RLIDTNHLYAMKTLR---KADVLKRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNL 135
R T H+ A+K +R + KR + + D++ ++ D ++V+ + +F ++
Sbjct: 45 RFRKTGHVIAVKQMRRSGNKEENKR-----ILMDLDVVLKSHDCPYIVQCFGTFITNTDV 99
Query: 136 YFVMDY 141
+ M+
Sbjct: 100 FIAMEL 105
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 81.3 bits (201), Expect = 1e-16
Identities = 40/201 (19%), Positives = 60/201 (29%), Gaps = 62/201 (30%)
Query: 588 VMKGSP-HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAE----L-TCAVESVH 639
+KG+ LY + DY G L L + + + + L T +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQG 159
Query: 640 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
K HRD+K NIL+ ++G + D GL F N N
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR------------- 206
Query: 700 SQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG------YTQ 753
VGT Y+ PEVL +
Sbjct: 207 -----------------------------------VGTKRYMPPEVLDESLNRNHFQSYI 231
Query: 754 LCDWWSVGVILYEMLVGSPPF 774
+ D +S G+IL+E+
Sbjct: 232 MADMYSFGLILWEVARRCVSG 252
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 81.4 bits (201), Expect = 2e-16
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 32/159 (20%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G G V V + + K I+ + ++R++ H I GAF
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF--- 100
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ M+++ GG L +L K G E + +++ AV
Sbjct: 101 -------------YSDG---EISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAV 140
Query: 636 -------ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 667
HK+ +HRD+KP NIL++ G IKL DFG
Sbjct: 141 IKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFG 177
Score = 62.9 bits (153), Expect = 2e-10
Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 14/133 (10%)
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW 789
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P + E
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL------- 238
Query: 790 ESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPH 849
D N + + P + + + PP
Sbjct: 239 -------ELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK 291
Query: 850 IPRIQNSMDTSNF 862
+P S++ +F
Sbjct: 292 LPSGVFSLEFQDF 304
Score = 46.4 bits (110), Expect = 3e-05
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 6/104 (5%)
Query: 415 EMAKIGLSAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKID 474
++ ++ L + + ++ L+QK+ ++ F KI +G G G V V
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVG------ELKDDDFEKISELGAGNGGVVFKVSHKP 56
Query: 475 TNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGAF 518
+ + A K I+ + ++R++ H I GAF
Sbjct: 57 SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Score = 36.0 bits (83), Expect = 0.053
Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 80 RLIDTNHLYAMKTLR---KADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLY 136
+ + A K + K + + + E +L E ++ ++V Y +F +
Sbjct: 53 SHKPSGLVMARKLIHLEIKPAIRNQ-----IIRELQVLHECNSPYIVGFYGAFYSDGEIS 107
Query: 137 FVMDY 141
M++
Sbjct: 108 ICMEH 112
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 80.9 bits (200), Expect = 2e-16
Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 20/142 (14%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI-YKCVGAFGEVTLVRK-IDTNHLYVMKGSPHNN---- 596
G FG V R + + + +K + Y + + + K + ++ H N
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-----FLQKLRHPNTIQY 119
Query: 597 ---------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ VM+Y G L + K +E + +H IHRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 648 IKPDNILIDRDGHIKLTDFGLC 669
+K NIL+ G +KL DFG
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSA 201
Score = 53.6 bits (129), Expect = 1e-07
Identities = 29/136 (21%), Positives = 45/136 (33%), Gaps = 26/136 (19%)
Query: 731 AHSLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
A+S VGTP ++APEV+L Y D WS+G+ E+ PP +
Sbjct: 207 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL----FNMNAMSAL 262
Query: 788 NWESCLHIP-------AEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVDFE 839
HI S + + L R + + H F E
Sbjct: 263 -----YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR--PTSEVLLKHRFVLR---E 312
Query: 840 KGVRTLTPPHIPRIQN 855
+ + I R ++
Sbjct: 313 RPPTVIM-DLIQRTKD 327
Score = 37.4 bits (87), Expect = 0.020
Identities = 8/63 (12%), Positives = 24/63 (38%)
Query: 82 IDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+ + + A+K + + + + E L + + ++ + + + VM+Y
Sbjct: 76 VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
Query: 142 IPG 144
G
Sbjct: 136 CLG 138
Score = 33.5 bits (77), Expect = 0.30
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ +F ++ IG G+FG V R + + + A+K +
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM 87
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 80.6 bits (199), Expect = 2e-16
Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 61/211 (28%)
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAE-LTC----AVESVHKMGFIH 645
L+ V DY G L L + + E + + A L V + K H
Sbjct: 111 TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
RD+K NIL+ ++G + D GL ++ N
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR------------------- 211
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG------YTQLCDWWS 759
VGT Y+APEVL + + D ++
Sbjct: 212 -----------------------------VGTKRYMAPEVLDDSINMKHFESFKRADIYA 242
Query: 760 VGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+G++ +E+ + + Y +
Sbjct: 243 MGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 79.9 bits (197), Expect = 3e-16
Identities = 38/194 (19%), Positives = 57/194 (29%), Gaps = 61/194 (31%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVH---------KM 641
VM+Y P G L L R +T + +H K
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL-AHSVTRGLAYLHTELPRGDHYKP 139
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
HRD+ N+L+ DG ++DFGL S N + +
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGL---------SMRLTGNRLVRPGEEDNAA----- 185
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL-------LRTGYTQL 754
S VGT Y+APEVL +
Sbjct: 186 ------------------------------ISEVGTIRYMAPEVLEGAVNLRDXESALKQ 215
Query: 755 CDWWSVGVILYEML 768
D +++G+I +E+
Sbjct: 216 VDMYALGLIYWEIF 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 79.6 bits (197), Expect = 5e-16
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 45/181 (24%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N +Y + + + DL +I + + +++I + AV+ +H IHRD+KP N+L
Sbjct: 87 NEVYIIQELM-QTDL-HRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
I+ + +K+ DFGL D D+ EP+ + S
Sbjct: 145 INSNCDLKVCDFGLARII-------------DESAADNSEPTGQQSGMV----------- 180
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPP 773
E V T Y APEV+L Y++ D WS G IL E+ + P
Sbjct: 181 ----------EF--------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
Query: 774 F 774
F
Sbjct: 223 F 223
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 79.0 bits (195), Expect = 5e-16
Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 65/203 (32%)
Query: 587 YVMKGSPHNNLYF-VMDYIPGGDLMSLLIKKGIFEEPLARF---------YIAELTCAVE 636
+G+ + + + + G L L + L Y+ E ++
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 637 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPS 696
HK HRDIK N+L+ + + DFGL + +++ G
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGL---------ALKFEAGKSAGD------- 189
Query: 697 EEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVL-----LRTGY 751
H VGT Y+APEVL +
Sbjct: 190 ----------------------------------THGQVGTRRYMAPEVLEGAINFQRDA 215
Query: 752 TQLCDWWSVGVILYEMLVGSPPF 774
D +++G++L+E+
Sbjct: 216 FLRIDMYAMGLVLWELASRCTAA 238
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 79.2 bits (196), Expect = 6e-16
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 595 NNLYFVMDYIPGGDLMSLL--IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
L V +++ DL + L + + + + +L ++ +H +HRD+KP N
Sbjct: 92 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ G IKL DFGL
Sbjct: 151 ILVTSSGQIKLADFGL 166
Score = 55.3 bits (134), Expect = 3e-08
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 31/147 (21%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWE 790
Y APEVLL++ Y D WSVG I EM P F ++ + K++ +W
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 791 SCLHIPAEA--------------QLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSN 835
+ +P +A + G DL+L+ T KR+ +A +HP+F +
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI--SAYSALSHPYFQD 302
Query: 836 VDFEKGVRTLTPPHIPRIQNS--MDTS 860
++ K H+P QN+ ++T+
Sbjct: 303 LERCK---ENLDSHLPPSQNTSELNTA 326
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 78.8 bits (195), Expect = 8e-16
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 590 KGSPHNNLYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRDI 648
++Y V D+ DL LL + F + + L + +H+ +HRD+
Sbjct: 92 YNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDM 150
Query: 649 KPDNILIDRDGHIKLTDFGL 668
K N+LI RDG +KL DFGL
Sbjct: 151 KAANVLITRDGVLKLADFGL 170
Score = 45.3 bits (108), Expect = 5e-05
Identities = 28/127 (22%), Positives = 40/127 (31%), Gaps = 34/127 (26%)
Query: 740 YIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI----------N 788
Y PE+LL Y D W G I+ EM SP NT Q +I
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEV 252
Query: 789 WESCLHIP-------------------AEAQLSPEGADLILQLCT-GADKRLGKNASEVK 828
W + + P DLI +L +R+ ++ +
Sbjct: 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI--DSDDAL 310
Query: 829 AHPFFSN 835
H FF +
Sbjct: 311 NHDFFWS 317
Score = 29.1 bits (66), Expect = 7.3
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Query: 429 MRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
M K E + ++ K + K+ IG G FGEV R T A+K +
Sbjct: 1 MAKQYDSVECPFCD----EVSK--YEKLAKIGQGTFGEVFKARHRKTGQKVALKKV 50
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 78.0 bits (193), Expect = 1e-15
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 590 KGSPHNNLYFVMDYIPGGDLMSLL--IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ + V +++ DL + L + + + ++ +H +HRD
Sbjct: 87 RTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 145
Query: 648 IKPDNILIDRDGHIKLTDFGL 668
+KP+NIL+ G +KL DFGL
Sbjct: 146 LKPENILVTSGGTVKLADFGL 166
Score = 49.5 bits (119), Expect = 2e-06
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 26/122 (21%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWE 790
Y APEVLL++ Y D WSVG I EM P F N+ A+ K+ +W
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 791 SCLHIPAEA--------------QLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSN 835
+ +P A ++ GA L+L++ T KR+ +A H +
Sbjct: 245 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI--SAFRALQHSYLHK 302
Query: 836 VD 837
+
Sbjct: 303 DE 304
Score = 29.5 bits (67), Expect = 4.5
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 447 KMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ + + IGVGA+G V R + H A+K++
Sbjct: 7 ATSR--YEPVAEIGVGAYGTVYKARDPHSGHFVALKSV 42
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 77.5 bits (191), Expect = 1e-15
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 10/81 (12%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPL----ARFYIAELTCAVESVHKMGFIHR 646
V ++I GG L + + A + L A ++ H+ G
Sbjct: 100 VHTRAGGLVVAEWIRGGSLQEVA------DTSPSPVGAIRAMQSLAAAADAAHRAGVALS 153
Query: 647 DIKPDNILIDRDGHIKLTDFG 667
P + + DG + L
Sbjct: 154 IDHPSRVRVSIDGDVVLAYPA 174
Score = 42.8 bits (101), Expect = 3e-04
Identities = 8/48 (16%), Positives = 12/48 (25%), Gaps = 7/48 (14%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
+ P + D +G LY +LV P
Sbjct: 170 LAYPATMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSG 210
Score = 32.4 bits (74), Expect = 0.66
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
A+ + VL + + + L+ D V ++ + V ++I G L
Sbjct: 60 ALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQ 119
Query: 149 PYPSPAAAPPPPP 161
A P P
Sbjct: 120 EV---ADTSPSPV 129
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 78.3 bits (193), Expect = 3e-15
Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 32/186 (17%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ LY V++ DL L E + + L +H+ G IHRD+KP N L
Sbjct: 103 DELYIVLEIA-DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCL 161
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+++D +K+ DFGL ++ ++ + + Q T
Sbjct: 162 LNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK-KQLT----------- 209
Query: 715 LKPLERRRRREHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPP 773
H V T Y APE++L + YT+ D WS G I E+L
Sbjct: 210 ----------SH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
Query: 774 FLANTS 779
+ + +
Sbjct: 252 HINDPT 257
Score = 29.7 bits (67), Expect = 4.7
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 456 IKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKI 500
IG G++G V L +T A+K K F ++ ++I
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIK---KVNRMFEDLIDCKRI 72
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 76.5 bits (189), Expect = 4e-15
Identities = 65/328 (19%), Positives = 111/328 (33%), Gaps = 80/328 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI--YKCVGAFGEVTLVRKIDTNH-----LY-VMKGSPH 594
G + EV I N V+K + K E+ ++ + L ++K
Sbjct: 47 GKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENL-RGGPNIITLADIVKDPVS 105
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
V +++ D L + RFY+ E+ A++ H MG +HRD+KP N++
Sbjct: 106 RTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 162
Query: 655 IDRD-GHIKLTDFGL----CTGFRWTH--------------NSKYYQSNGDHGRQDSMEP 695
ID + ++L D+GL G + + + Y + D M
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD------M-- 214
Query: 696 SEEWSQGTPGQECRCINSPL----KPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS G C+ + + +P Q ++GT +
Sbjct: 215 ---WSLG-------CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTED------------ 252
Query: 752 TQLCDWWSV-GVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
L D+ + L ++ WE +H + +SPE D +
Sbjct: 253 --LYDYIDKYNIELDPRFNDILG---------RHSRKRWERFVHSENQHLVSPEALDFLD 301
Query: 811 QLCT-GADKRLGKNASEVKAHPFFSNVD 837
+L RL A E HP+F V
Sbjct: 302 KLLRYDHQSRL--TAREAMEHPYFYTVV 327
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 75.8 bits (187), Expect = 4e-15
Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKID-----TNHLYVMK--GS--P 593
G +G V +R + + + +K I V + + L+ +D + + + G+
Sbjct: 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 77
Query: 594 HNNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFYIAELTCAV-------ESVHKMGF 643
+++ M+ + ++ K E + ++ ++ S +
Sbjct: 78 EGDVWICMELMDTSLDKFYKQVIDKGQTIPED----ILGKIAVSIVKALEHLHSKLSV-- 131
Query: 644 IHRDIKPDNILIDRDGHIKLTDFG 667
IHRD+KP N+LI+ G +K+ DFG
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFG 155
Score = 54.6 bits (132), Expect = 4e-08
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 735 VGTPNYIAPEVLL----RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
G Y+APE + + GY+ D WS+G+ + E+ + P+ + + Q K + E
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 229
Query: 791 SCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF-----SNVDFEKGVRT 844
+PA+ + S E D C + + E+ HPFF D V+
Sbjct: 230 PSPQLPAD-KFSAEFVDFT-SQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKL 286
Score = 38.0 bits (89), Expect = 0.010
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
I +G GA+G V +R + + + A+K I
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI 40
Score = 29.9 bits (68), Expect = 4.1
Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 80 RLIDTNHLYAMKTLR---KADVLKRNQVAHVKAERDI-LAEADNEWVVKLYYSFQDKDNL 135
R + + + A+K +R + KR + + DI + D + V Y + + ++
Sbjct: 27 RHVPSGQIMAVKRIRATVNSQEQKR-----LLMDLDISMRTVDCPFTVTFYGALFREGDV 81
Query: 136 YFVMDY 141
+ M+
Sbjct: 82 WICMEL 87
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 75.5 bits (186), Expect = 9e-15
Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT-----NHLYVMK--GS--P 593
G +G V +R + + + +K I V + + L+ +D + + + G+
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 121
Query: 594 HNNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFYIAELTCAV-------ESVHKMGF 643
+++ M+ + ++ K E + ++ ++ S +
Sbjct: 122 EGDVWICMELMDTSLDKFYKQVIDKGQTIPED----ILGKIAVSIVKALEHLHSKLSV-- 175
Query: 644 IHRDIKPDNILIDRDGHIKLTDFG 667
IHRD+KP N+LI+ G +K+ DFG
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFG 199
Score = 55.1 bits (133), Expect = 5e-08
Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 11/127 (8%)
Query: 735 VGTPNYIAPEV----LLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
G Y+APE L + GY+ D WS+G+ + E+ + P+ + + Q K + E
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
Query: 791 SCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF-----SNVDFEKGVRTL 845
+PA+ + S E D C + + E+ HPFF D V+ +
Sbjct: 274 PSPQLPAD-KFSAEFVDFT-SQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLI 331
Query: 846 TPPHIPR 852
H
Sbjct: 332 LGDHHHH 338
Score = 40.4 bits (95), Expect = 0.002
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 430 RKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ L K I + ++ I +G GA+G V +R + + + A+K I
Sbjct: 30 PRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI 84
Score = 29.6 bits (67), Expect = 4.3
Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 68 LGESTTEVDNEIRLIDTNHLYAMKTLR---KADVLKRNQVAHVKAERDI-LAEADNEWVV 123
LG V ++R + + + A+K +R + KR + + DI + D + V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKR-----LLMDLDISMRTVDCPFTV 113
Query: 124 KLYYSFQDKDNLYFVMDY 141
Y + + +++ M+
Sbjct: 114 TFYGALFREGDVWICMEL 131
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 74.3 bits (183), Expect = 2e-14
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT-----NHLYVMK--GS--P 593
G +G V + + + +K I V + L+ +D + Y+++ G+
Sbjct: 33 GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR 92
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV----ESVH-KMGFIHRDI 648
+ + M+ + + ++ + + ++T A + + IHRDI
Sbjct: 93 EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDI 152
Query: 649 KPDNILIDRDGHIKLTDFG 667
KP NIL+DR G+IKL DFG
Sbjct: 153 KPSNILLDRSGNIKLCDFG 171
Score = 57.7 bits (140), Expect = 6e-09
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 735 VGTPNYIAPEVL----LRTGYTQLCDWWSVGVILYEMLVGSPPFLA-NTSAETQYKVINW 789
G Y+APE + R GY D WS+G+ LYE+ G P+ N+ + +V+
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG 245
Query: 790 ES-CLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF-----SNVDFEKGVR 843
+ L E + SP + + LC D+ E+ HPF V+ V
Sbjct: 246 DPPQLSNSEEREFSPSFINFV-NLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVC 304
Query: 844 TL 845
+
Sbjct: 305 KI 306
Score = 38.1 bits (89), Expect = 0.010
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ IG GA+G V + + + A+K I
Sbjct: 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI 55
Score = 32.3 bits (74), Expect = 0.67
Identities = 9/66 (13%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Query: 80 RLIDTNHLYAMKTLR---KADVLKRNQVAHVKAERDI-LAEADNEWVVKLYYSFQDKDNL 135
+ + A+K +R K+ + + D+ + +D ++V+ Y + + +
Sbjct: 42 VHKPSGQIMAVKRIRSTVDEKEQKQ-----LLMDLDVVMRSSDCPYIVQFYGALFREGDC 96
Query: 136 YFVMDY 141
+ M+
Sbjct: 97 WICMEL 102
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 70.8 bits (174), Expect = 2e-13
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 574 EVTLVRKIDTNHLYVMK--GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEE--PLARFYIA 629
E+ + ++ NH ++K G+ N + VM+Y GG L ++L
Sbjct: 51 ELRQLSRV--NHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 630 ELTCA--VESVHKM---GFIHRDIKPDNILIDRDG-HIKLTDFGL 668
L C+ V +H M IHRD+KP N+L+ G +K+ DFG
Sbjct: 109 -LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152
Score = 57.3 bits (139), Expect = 7e-09
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+ G+ ++APEV + Y++ CD +S G+IL+E++ PF
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 70.1 bits (172), Expect = 7e-13
Identities = 48/264 (18%), Positives = 84/264 (31%), Gaps = 90/264 (34%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-----EVTLVRKIDTNHLYVMKGSPHNNL 597
G F V L + + N MK I + + E+ L++++ N K
Sbjct: 30 GHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAEDEIKLLQRV--NDADNTKEDSMGAN 86
Query: 598 YFV--MDY----IPGG-------DLMSL----LIKKGIFE---EPLARFYIAELTCAVES 637
+ + +D+ P G +++ LIKK + +L ++
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 638 VHKM-GFIHRDIKPDNILIDR------DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
+H+ G IH DIKP+N+L++ IK+ D G W
Sbjct: 147 MHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHYT---------- 193
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTG 750
+ + T Y +PEVLL
Sbjct: 194 ------------------------------------------NSIQTREYRSPEVLLGAP 211
Query: 751 YTQLCDWWSVGVILYEMLVGSPPF 774
+ D WS +++E++ G F
Sbjct: 212 WGCGADIWSTACLIFELITGDFLF 235
Score = 30.1 bits (68), Expect = 3.5
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 456 IKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG-----EVTLVRKI 500
++ +G G F V L + + N AMK I + + E+ L++++
Sbjct: 24 VRKLGWGHFSTVWLAKDMVNNTHVAMK-IVRGDKVYTEAAEDEIKLLQRV 72
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding,
membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Length = 345
Score = 68.2 bits (167), Expect = 3e-12
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 24/179 (13%)
Query: 516 GAFGEVTLVRKIDTNH---LYVMKTIYKCVGV-FGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG + L + +V+K Y+ G F E+ +++ K +
Sbjct: 48 GGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY 107
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA-E 630
G + + L KG + + VM+ + G DL + + G F++ +
Sbjct: 108 LG----IPLFYGSGLTEFKGRSYR--FMVMERL-GIDLQKISGQNGTFKKSTV-LQLGIR 159
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +E +H+ ++H DIK N+L+ + L D+GL S Y NG+H
Sbjct: 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL---------SYRYCPNGNH 209
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 67.0 bits (164), Expect = 4e-12
Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 26/164 (15%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTL-----------VRKIDTNHLYVMKTIYKCVGAF-GE 574
+ N + K I K G FG V ++ + + + F E
Sbjct: 16 LADNEIEYEKQIGK--GGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 575 VTLVRKIDTNHLYVMK--GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA-EL 631
V ++ + NH ++K G HN VM+++P GDL L+ K + + + ++
Sbjct: 74 VFIMSNL--NHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 632 TCAVESVHKMG--FIHRDIKPDNILIDRDG-----HIKLTDFGL 668
+E + +HRD++ NI + K+ DFGL
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175
Score = 52.3 bits (126), Expect = 2e-07
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 733 SLVGTPNYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGSPPF--LANTSAETQYKVIN 788
L+G ++APE + YT+ D +S +ILY +L G PF + + +
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 789 WESCLHIPAEAQLSPEGADLILQLC 813
IP + P +++LC
Sbjct: 245 EGLRPTIPEDC---PPRLRNVIELC 266
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 67.5 bits (165), Expect = 5e-12
Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 46/221 (20%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIY 512
+ K +G G+FG V V I++ +A+K + + R
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ----DPRYKN-R-------------- 49
Query: 513 KCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAF 572
E+ +++ +D H+ ++K + G+ + + V
Sbjct: 50 -------ELDIMKVLD--HVNIIKLVD-YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNH 99
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDL----MSLLIKKGIFEEPLARFYI 628
+ +V +L V +M+Y+P L S + L YI
Sbjct: 100 HKSVIVNPSQNKYLNV-----------IMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYI 147
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILID-RDGHIKLTDFGL 668
+L AV +H +G HRDIKP N+L++ +D +KL DFG
Sbjct: 148 YQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Score = 45.5 bits (108), Expect = 5e-05
Identities = 35/155 (22%), Positives = 51/155 (32%), Gaps = 37/155 (23%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF------------------------ 774
Y APE++L T YT D WS+G + E+++G P F
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM 266
Query: 775 --LANTSAET---QYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVK 828
+ E K +W L DL+ Q+ D R+ N E
Sbjct: 267 IRMNPHYTEVRFPTLKAKDWRKILP----EGTPSLAIDLLEQILRYEPDLRI--NPYEAM 320
Query: 829 AHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFD 863
AHPFF ++ + P N F+
Sbjct: 321 AHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFN 355
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 67.3 bits (165), Expect = 6e-12
Identities = 52/255 (20%), Positives = 89/255 (34%), Gaps = 64/255 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-----EVTLVRKI-----DTNHLYVMKGS 592
G FG V L + ID Y +K + + + + E +++KI + N++ G
Sbjct: 46 GTFGRVLLCQHIDNKKYYAVKVV-RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104
Query: 593 --PHNNLYFVMDYIPGGDLMSL----LIKKGIFE---EPLARFYIAELTCAVESVHKMGF 643
++++ + + + +I + + + Y E+ A+ + KM
Sbjct: 105 FMYYDHMCLIFE------PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL 158
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG----DHGRQDSMEPSEEW 699
H D+KP+NIL+D K +S G D G
Sbjct: 159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG----------- 207
Query: 700 SQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 759
C + S++ T Y APEV+L G+ D WS
Sbjct: 208 --------CATF-------------KSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWS 244
Query: 760 VGVILYEMLVGSPPF 774
G +L E+ GS F
Sbjct: 245 FGCVLAELYTGSLLF 259
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 65.9 bits (161), Expect = 2e-11
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 27/146 (18%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI-----YKCVGAFGEVTLVRKIDTNH------LYVMKG 591
G FG V + D+ L +K + +K E+ ++RK+D H Y
Sbjct: 65 GSFGVVYQAKLCDSGELVAIKKVLQDKRFK----NRELQIMRKLD--HCNIVRLRYFFYS 118
Query: 592 SPHNN----LYFVMDYIPGGDLMSLL----IKKGIFEEPLARFYIAELTCAVESVHKMGF 643
S L V+DY+P + + K + Y+ +L ++ +H G
Sbjct: 119 SGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 644 IHRDIKPDNILIDRD-GHIKLTDFGL 668
HRDIKP N+L+D D +KL DFG
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGS 203
Score = 49.7 bits (119), Expect = 3e-06
Identities = 33/126 (26%), Positives = 41/126 (32%), Gaps = 37/126 (29%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF---------------LANTSAET- 782
Y APE++ T YT D WS G +L E+L+G P F L + E
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 783 -------------QYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVK 828
Q K W + PE L +L RL E
Sbjct: 282 REMNPNYTEFKFPQIKAHPWTKVFR----PRTPPEAIALCSRLLEYTPTARL--TPLEAC 335
Query: 829 AHPFFS 834
AH FF
Sbjct: 336 AHSFFD 341
Score = 32.0 bits (73), Expect = 0.83
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
+ K IG G+FG V + D+ L A+K +
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 87
Score = 28.9 bits (65), Expect = 8.2
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 29/78 (37%)
Query: 80 RLIDTNHLYAMK--------TLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSF-- 129
+L D+ L A+K R E I+ + D+ +V+L Y F
Sbjct: 74 KLCDSGELVAIKKVLQDKRFKNR---------------ELQIMRKLDHCNIVRLRYFFYS 118
Query: 130 ----QDKDNLYFVMDYIP 143
+D+ L V+DY+P
Sbjct: 119 SGEKKDEVYLNLVLDYVP 136
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 65.0 bits (159), Expect = 3e-11
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 597 LYFVMDYIPGGDL----MSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
L V++Y+P + K L + Y+ +L ++ +H +G HRDIKP N
Sbjct: 113 LNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN 171
Query: 653 ILIDRD-GHIKLTDFGL 668
+L+D G +KL DFG
Sbjct: 172 LLLDPPSGVLKLIDFGS 188
Score = 57.3 bits (139), Expect = 1e-08
Identities = 40/190 (21%), Positives = 62/190 (32%), Gaps = 64/190 (33%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANT---------------SAET- 782
Y APE++ T YT D WS G ++ E++ G P F + S E
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 783 -------------QYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVK 828
Q + + + P+ DLI +L RL A E
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFR----PRTPPDAIDLISRLLEYTPSARL--TAIEAL 320
Query: 829 AHPFFSNV-----------------DFEKGVRTLTPPHIPRI----------QNSMDTSN 861
HPFF + ++ K ++ P I R+ +D N
Sbjct: 321 CHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQHAEAELLSRGIDVHN 380
Query: 862 FDPVDPDKLR 871
F P+ + L+
Sbjct: 381 FQPIPLESLK 390
Score = 29.6 bits (67), Expect = 4.5
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 95 KADVLKRNQVAHVKAERD---------ILAEADNEWVVKLYYSF------QDKDNLYFVM 139
+A +++ ++VA K +D I+ + VV L F +D+ L V+
Sbjct: 58 QAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117
Query: 140 DYIP 143
+Y+P
Sbjct: 118 EYVP 121
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3;
transferase, pseudo kinase domain, vaccinia related
kinase, ATP-binding; 2.00A {Homo sapiens}
Length = 352
Score = 64.4 bits (157), Expect = 6e-11
Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 33/185 (17%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNH--LYVMKTIYKCVGAFG 573
G + T K K+D L+ + ++
Sbjct: 53 DNQGILYEAAPTSTLTCDSGPQKQKFS---------LKLDAKDGRLFNEQNFFQRAAKPL 103
Query: 574 EVTLVRKIDTNHL-----YVMKGSPHNNLYF-VMDYIPGGDLMSLLIK--KGIFEEPLAR 625
+V +K+ + L + G + F V+ + G L S L K + E
Sbjct: 104 QVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSV- 161
Query: 626 FYIA-ELTCAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQ 682
+A L A+E +H+ ++H ++ +NI +D + + L +G + Y
Sbjct: 162 LQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGF---------AFRYC 212
Query: 683 SNGDH 687
+G H
Sbjct: 213 PSGKH 217
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 62.6 bits (153), Expect = 1e-10
Identities = 44/251 (17%), Positives = 84/251 (33%), Gaps = 75/251 (29%)
Query: 543 GVFGEV---TLVRKIDTNHLYV-MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL- 597
G FG V + + + + V +K + + ++ YVM + ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-----EAYVMASVDNPHVC 80
Query: 598 -----------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIH 645
+ +P G L+ + + K + ++ + + +H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTH-NSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
RD+ N+L+ H+K+TDFGL + K Y + G+
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLA---KLLGAEEKEYHAE--GGK--------------- 180
Query: 705 GQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
P+K ++A E +L YT D WS GV +
Sbjct: 181 --------VPIK-----------------------WMALESILHRIYTHQSDVWSYGVTV 209
Query: 765 YEML-VGSPPF 774
+E++ GS P+
Sbjct: 210 WELMTFGSKPY 220
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor,
PF670462, transferase-transferase I complex; HET: 0CK;
1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Length = 296
Score = 62.4 bits (152), Expect = 1e-10
Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 50/147 (34%)
Query: 570 GAFGEVTLVRKIDTNHLYVMKG----SPHNNL---------------------------- 597
G+FG++ L I +K + H L
Sbjct: 20 GSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY 79
Query: 598 -YFVMDYIPGGDLMSLLIKKGIFEEPLARF------YIA-ELTCAVESVHKMGFIHRDIK 649
VM+ + G L L +F +A ++ +E +H FIHRD+K
Sbjct: 80 NVMVMELL-GPSLEDLFNFCS------RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVK 132
Query: 650 PDNILIDRDGH---IKLTDFGLCTGFR 673
PDN L+ + + DFGL +R
Sbjct: 133 PDNFLMGLGKKGNLVYIIDFGLAKKYR 159
Score = 32.0 bits (73), Expect = 0.83
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKT 483
+ + IG G+FG++ L I A+K
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 63.1 bits (154), Expect = 1e-10
Identities = 57/263 (21%), Positives = 91/263 (34%), Gaps = 70/263 (26%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ Y VM ++ G DL L+K E +F + ++ + +H G IHRD+KP
Sbjct: 100 DDFTDFYLVMPFM-GTDL-GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPG 157
Query: 652 NILIDRDGHIKLTDFGLCTGF----------RWTH------NSKYYQSNGDHGRQDSMEP 695
N+ ++ D +K+ DFGL RW N Y D
Sbjct: 158 NLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVD--------- 208
Query: 696 SEEWSQGTPGQECRCINSPL---KPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
WS G CI + + K L + Q + GTP E + R
Sbjct: 209 --IWSVG-------CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP---AEFVQR---- 252
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+ S + + ++ S L SP +L+ ++
Sbjct: 253 ----------------LQSDEAKNYMKGLPELEKKDFASILT-----NASPLAVNLLEKM 291
Query: 813 CT-GADKRLGKNASEVKAHPFFS 834
A++R+ A E AHP+F
Sbjct: 292 LVLDAEQRV--TAGEALAHPYFE 312
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A
{Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A*
2csn_A*
Length = 298
Score = 62.4 bits (152), Expect = 1e-10
Identities = 34/149 (22%), Positives = 51/149 (34%), Gaps = 52/149 (34%)
Query: 570 GAFGEVTLVRKIDTNHLYVMKG----SPHNNL---------------------------- 597
G+FG + + N +K S L
Sbjct: 21 GSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80
Query: 598 -YFVMDYIPGGDLMSLLIKKGIFEEPLARF------YIA-ELTCAVESVHKMGFIHRDIK 649
V+D + G L LL G +F A ++ V+S+H+ ++RDIK
Sbjct: 81 NVLVIDLL-GPSLEDLLDLCG------RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIK 133
Query: 650 PDNILIDRDGH-----IKLTDFGLCTGFR 673
PDN LI R I + DFG+ +R
Sbjct: 134 PDNFLIGRPNSKNANMIYVVDFGMVKFYR 162
Score = 31.9 bits (73), Expect = 0.86
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 456 IKPIGVGAFGEVTLVRKIDTNHLYAMKT 483
+ IG G+FG + + N A+K
Sbjct: 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKF 42
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 62.5 bits (152), Expect = 3e-10
Identities = 57/269 (21%), Positives = 88/269 (32%), Gaps = 91/269 (33%)
Query: 554 IDTNHLYVMKTIYKCVGAFGEV--------------TLVRKIDTNHL-------YVMKGS 592
I L + + + G FGEV TL K T VMK
Sbjct: 181 IPRESLRLEVKLGQ--GCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKL 236
Query: 593 PHNNL------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESV 638
H L Y V +Y+ G L+ L + L + A++ + V
Sbjct: 237 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEE 698
+M ++HRD++ NIL+ + K+ DFGL R +++Y G
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGL---ARLIEDNEYTARQGA------------ 341
Query: 699 WSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 758
P+K + APE L +T D W
Sbjct: 342 -------------KFPIK-----------------------WTAPEAALYGRFTIKSDVW 365
Query: 759 SVGVILYEML-VGSPPFLANTSAETQYKV 786
S G++L E+ G P+ + E +V
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNREVLDQV 394
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 62.9 bits (153), Expect = 3e-10
Identities = 44/202 (21%), Positives = 75/202 (37%), Gaps = 65/202 (32%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
M+ H ++ + +M+ G+L S L K + Y +L+
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY+++ G+
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKASK--GK---- 553
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
P+K ++APE + +T
Sbjct: 554 -------------------LPIK-----------------------WMAPESINFRRFTS 571
Query: 754 LCDWWSVGVILYEML-VGSPPF 774
D W GV ++E+L G PF
Sbjct: 572 ASDVWMFGVCMWEILMHGVKPF 593
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 61.5 bits (150), Expect = 4e-10
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
++Y V D + DL L+K +++ ++ ++ +H +HRD+KP N+L
Sbjct: 103 KDVYIVQDLM-ETDL-YKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL 160
Query: 655 IDRDGHIKLTDFGL 668
++ +K+ DFGL
Sbjct: 161 LNTTCDLKICDFGL 174
Score = 45.7 bits (109), Expect = 5e-05
Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 735 VGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPF 774
V T Y APE++L GYT+ D WSVG IL EML P F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 61.6 bits (150), Expect = 4e-10
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V + G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 107 NDVYLVTHLM-GADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 655 IDRDGHIKLTDFGL 668
++ D +K+ DFGL
Sbjct: 165 VNEDCELKILDFGL 178
Score = 46.6 bits (111), Expect = 2e-05
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 735 VGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPF 774
V T Y APE++L Y Q D WSVG I+ E+L G F
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Score = 28.8 bits (65), Expect = 9.4
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 456 IKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKI 500
+ P+G GA+G V T A+K K F + ++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVK---KLSRPFQSIIHAKRT 75
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 61.1 bits (147), Expect = 5e-10
Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 31/222 (13%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYV 507
+ + + IG G FGEV + A+K I + ++ +H
Sbjct: 17 LPTEKLQRCEKIGEGVFGEVFQTI--ADHTPVAIKII--------AIEGPDLVNGSHQKT 66
Query: 508 MKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK 567
+ I + E++L+ N + + ++ Y
Sbjct: 67 FEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV------------------HCVQGSYP 108
Query: 568 CVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFY 627
+ + + + L+ V+++ GG + + K + A+
Sbjct: 109 PLLLKAWDHYNSTKGSAN-DRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-LSSLATAKSI 166
Query: 628 IAELTCAVESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ +LT ++ + F HRD+ N+L+ + KL
Sbjct: 167 LHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLN 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 61.2 bits (149), Expect = 6e-10
Identities = 48/263 (18%), Positives = 88/263 (33%), Gaps = 71/263 (26%)
Query: 595 NNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ LY V + + DL ++ ++ + ++++ + + +H+ G +HRD+ P NI
Sbjct: 107 HKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNI 165
Query: 654 LIDRDGHIKLTDFGLC---------TGF---RWTH------NSKYYQSNGDHGRQDSMEP 695
L+ + I + DF L T + RW K + D M
Sbjct: 166 LLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVD------M-- 217
Query: 696 SEEWSQGTPGQECRCINSPL---KPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
WS G C+ + + K L R +Q +VGTP E ++
Sbjct: 218 ---WSAG-------CVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK---IEDVVMFSSP 264
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+ L S W + + P DLI ++
Sbjct: 265 S----------ARDYLRNSLS---------NVPARAWTAVVP-----TADPVALDLIAKM 300
Query: 813 CT-GADKRLGKNASEVKAHPFFS 834
+R+ + + HP+F
Sbjct: 301 LEFNPQRRI--STEQALRHPYFE 321
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 61.1 bits (149), Expect = 6e-10
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 17/112 (15%)
Query: 588 VMKGSPHNNL-------------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA-ELTC 633
++K H N+ Y VM+ + GGD ++ L +G + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAA 224
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+E + IHRD+ N L+ +K++DFG+ R + Y S G
Sbjct: 225 GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS---REEADGVYAASGG 273
Score = 34.9 bits (81), Expect = 0.099
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVIN 788
APE L Y+ D WS G++L+E +G+ P+ ++ +T+ V
Sbjct: 283 APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK 330
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 61.4 bits (149), Expect = 6e-10
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++Y VM+ + +L +I+ + E + + + ++ C ++ +H G IHRD+KP
Sbjct: 137 EEFQDVYLVMELM-DANL-CQVIQMELDHERM-SYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Query: 652 NILIDRDGHIKLTDFGL 668
NI++ D +K+ DFGL
Sbjct: 194 NIVVKSDCTLKILDFGL 210
Score = 50.2 bits (120), Expect = 2e-06
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
V T Y APEV+L GY + D WSVG I+ EM+ F
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 60.8 bits (148), Expect = 6e-10
Identities = 53/260 (20%), Positives = 97/260 (37%), Gaps = 71/260 (27%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ Y VM ++ DL + + EE + ++ + ++ ++ +H G +HRD+KP N+
Sbjct: 102 YDFYLVMPFM-QTDLQKI-MGLKFSEEKI-QYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 158
Query: 655 IDRDGHIKLTDFGLC-------TGF---RWTH------NSKYYQSNGDHGRQDSMEPSEE 698
++ D +K+ DFGL TG+ RW + +Y D +
Sbjct: 159 VNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVD------I----- 207
Query: 699 WSQGTPGQECRCINSPL---KPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 755
WS G CI + + K L + + Q + G P E + +
Sbjct: 208 WSVG-------CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG---TEFVQK------- 250
Query: 756 DWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT- 814
+ + + Q ++ + SP+ ADL+ ++
Sbjct: 251 -------------LNDKAAKSYIQSLPQTPRKDFTQLF-----PRASPQAADLLEKMLEL 292
Query: 815 GADKRLGKNASEVKAHPFFS 834
DKRL A++ HPFF
Sbjct: 293 DVDKRL--TAAQALTHPFFE 310
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 60.4 bits (147), Expect = 8e-10
Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 73/250 (29%)
Query: 543 GVFGEV---TLVRKIDTNHLYV-MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL- 597
GVFG V + + ++ + V +K I G + H+ + H ++
Sbjct: 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD-----HMLAIGSLDHAHIV 78
Query: 598 -----------YFVMDYIPGGDLMS-LLIKKGIFEEPLARFYIAELTCAVESVHKMGFIH 645
V Y+P G L+ + +G L + ++ + + + G +H
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 138
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
R++ N+L+ +++ DFG+ +
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLL-YSEAK---------------- 178
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+P+K ++A E + YT D WS GV ++
Sbjct: 179 -------TPIK-----------------------WMALESIHFGKYTHQSDVWSYGVTVW 208
Query: 766 EML-VGSPPF 774
E++ G+ P+
Sbjct: 209 ELMTFGAEPY 218
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino
acid sequence, binding sites, domain, models, molecular;
HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Length = 364
Score = 60.6 bits (147), Expect = 8e-10
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 47/192 (24%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G FG + L + + V D L+ Y+ ++
Sbjct: 46 GGFGCIYLADMNSSESVGSDAPCVVKVE---------PSDNGPLFTELKFYQRAAKPEQI 96
Query: 576 TLVRKIDTNH-----------LYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLA 624
+ L+ G + + +MD G DL +
Sbjct: 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR--FMIMDRF-GSDLQKIYEANA------K 147
Query: 625 RF------YIA-ELTCAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFRWT 675
RF ++ + +E +H+ ++H DIK N+L++ + L D+GL
Sbjct: 148 RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL------- 200
Query: 676 HNSKYYQSNGDH 687
+ Y G H
Sbjct: 201 --AYRYCPEGVH 210
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase,
transferase, ATP- binding, phosphorylation,
nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB:
2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Length = 330
Score = 59.7 bits (145), Expect = 1e-09
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 27/150 (18%)
Query: 543 GVFGEVTLVRKIDTNHLYVMK---TIYKCVGAFGEVTLVRKIDTN----HLYVMKGSPHN 595
G FGE+ L + + TN +K + E +++ + +Y G
Sbjct: 20 GNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVY-YFGPCGK 78
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARF------YIA-ELTCAVESVHKMGFIHRDI 648
V++ + G L L F IA +L +E VH I+RD+
Sbjct: 79 YNAMVLELL-GPSLEDLFDLCD------RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDV 131
Query: 649 KPDNILIDRDGH-----IKLTDFGLCTGFR 673
KP+N LI R G+ I + DF L +
Sbjct: 132 KPENFLIGRPGNKTQQVIHIIDFALAKEYI 161
Score = 30.8 bits (70), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMK 482
F K IG G FGE+ L + + TN A+K
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK 40
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 59.6 bits (145), Expect = 2e-09
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V +Y+ DL + ++++G E AR ++ +L ++ +H +HRD+KP N+
Sbjct: 95 NSVYIVQEYM-ETDL-ANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF 152
Query: 655 ID-RDGHIKLTDFGL 668
I+ D +K+ DFGL
Sbjct: 153 INTEDLVLKIGDFGL 167
Score = 46.5 bits (111), Expect = 2e-05
Identities = 31/124 (25%), Positives = 45/124 (36%), Gaps = 32/124 (25%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI-------NWES 791
Y +P +LL YT+ D W+ G I EML G F A Q ++I + E
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF-AGAHELEQMQLILESIPVVHEED 248
Query: 792 CLHIPAEAQ--------------------LSPEGADLILQLCT-GADKRLGKNASEVKAH 830
+ + +S E D + Q+ T RL A E +H
Sbjct: 249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL--TAEEALSH 306
Query: 831 PFFS 834
P+ S
Sbjct: 307 PYMS 310
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 60.3 bits (146), Expect = 2e-09
Identities = 57/269 (21%), Positives = 88/269 (32%), Gaps = 91/269 (33%)
Query: 554 IDTNHLYVMKTIYKCVGAFGEV--------------TLVRKIDTNHL-------YVMKGS 592
I L + + + G FGEV TL K T VMK
Sbjct: 264 IPRESLRLEVKLGQ--GCFGEVWMGTWNGTTRVAIKTL--KPGTMSPEAFLQEAQVMKKL 319
Query: 593 PHNNL------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESV 638
H L Y V +Y+ G L+ L + L + A++ + V
Sbjct: 320 RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEE 698
+M ++HRD++ NIL+ + K+ DFGL R +++Y G
Sbjct: 380 ERMNYVHRDLRAANILVGENLVCKVADFGL---ARLIEDNEYTARQGA------------ 424
Query: 699 WSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 758
P+K + APE L +T D W
Sbjct: 425 -------------KFPIK-----------------------WTAPEAALYGRFTIKSDVW 448
Query: 759 SVGVILYEML-VGSPPFLANTSAETQYKV 786
S G++L E+ G P+ + E +V
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNREVLDQV 477
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 60.2 bits (146), Expect = 2e-09
Identities = 51/271 (18%), Positives = 88/271 (32%), Gaps = 93/271 (34%)
Query: 554 IDTNHLYVMKTIYKCVGAFGEV---------------TLVRKIDTNHL-------YVMKG 591
++ + + + G +GEV TL K DT + VMK
Sbjct: 217 MERTDITMKHKLGG--GQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKE 272
Query: 592 SPHNNL-------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVE 636
H NL Y + +++ G+L+ L + E +++ A+E
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 637 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPS 696
+ K FIHR++ N L+ + +K+ DFGL R Y G
Sbjct: 333 YLEKKNFIHRNLAARNCLVGENHLVKVADFGL---SRLMTGDTYTAHAG----------- 378
Query: 697 EEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 756
P+K + APE L ++ D
Sbjct: 379 --------------AKFPIK-----------------------WTAPESLAYNKFSIKSD 401
Query: 757 WWSVGVILYEML-VGSPPFLANTSAETQYKV 786
W+ GV+L+E+ G P+ ++ +
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 59.7 bits (145), Expect = 2e-09
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
++Y VM+ + +L + I+ + E + + + ++ C ++ +H G IHRD+KP NI+
Sbjct: 103 QDVYIVMELM-DANLCQV-IQMELDHERM-SYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 159
Query: 655 IDRDGHIKLTDFGL 668
+ D +K+ DFGL
Sbjct: 160 VKSDCTLKILDFGL 173
Score = 50.8 bits (122), Expect = 1e-06
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
V T Y APEV+L GY + D WSVG I+ EM+ G F
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 226
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 58.9 bits (143), Expect = 3e-09
Identities = 37/194 (19%), Positives = 67/194 (34%), Gaps = 56/194 (28%)
Query: 585 HLY--VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKM 641
L V +G V +Y+ G L + L G F + + + + +
Sbjct: 114 RLEGVVTRGRL---AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
G++HRD+ N+L+D + K++DFGL R + G+
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLS---RVLEDDPDAAYTTTGGK------------ 215
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 761
P++ + APE + ++ D WS G
Sbjct: 216 -----------IPIR-----------------------WTAPEAIAFRTFSSASDVWSFG 241
Query: 762 VILYEML-VGSPPF 774
V+++E+L G P+
Sbjct: 242 VVMWEVLAYGERPY 255
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 58.5 bits (142), Expect = 3e-09
Identities = 42/250 (16%), Positives = 82/250 (32%), Gaps = 73/250 (29%)
Query: 543 GVFGEV---TLVRKIDTNHLYV-MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL- 597
G FG V + + + + V +K + + ++ YVM + ++
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-----EAYVMASVDNPHVC 80
Query: 598 -----------YFVMDYIPGGDLMS-LLIKKGIFEEPLARFYIAELTCAVESVHKMGFIH 645
+ +P G L+ + K + ++ + + +H
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 140
Query: 646 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
RD+ N+L+ H+K+TDFGL + + + G+
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLA---KLLGAEEKEYH-AEGGK---------------- 180
Query: 706 QECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
P+K ++A E +L YT D WS GV ++
Sbjct: 181 -------VPIK-----------------------WMALESILHRIYTHQSDVWSYGVTVW 210
Query: 766 EML-VGSPPF 774
E++ GS P+
Sbjct: 211 ELMTFGSKPY 220
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 58.5 bits (142), Expect = 4e-09
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 597 LYFVMDYIPGGDL----MSLLIKKGIFEEPLARFYIAELTCAVESVHK--MGFIHRDIKP 650
L VM+Y+P L + ++ L + ++ +L ++ +H + HRDIKP
Sbjct: 101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKP 159
Query: 651 DNILIDR-DGHIKLTDFGL 668
N+L++ DG +KL DFG
Sbjct: 160 HNVLVNEADGTLKLCDFGS 178
Score = 48.4 bits (116), Expect = 6e-06
Identities = 30/126 (23%), Positives = 44/126 (34%), Gaps = 34/126 (26%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF------------------------ 774
Y APE++ YT D WSVG I EM++G P F
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256
Query: 775 --LANTSAET---QYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVK 828
L + + K I W + + + E DL+ L ++R+ E
Sbjct: 257 RKLNPSHTDVDLYNSKGIPWSNVFS-DHSLKDAKEAYDLLSALLQYLPEERM--KPYEAL 313
Query: 829 AHPFFS 834
HP+F
Sbjct: 314 CHPYFD 319
Score = 31.5 bits (72), Expect = 1.3
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
F + G G FG V L ++ T A+K +
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV 56
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 58.5 bits (142), Expect = 4e-09
Identities = 40/194 (20%), Positives = 69/194 (35%), Gaps = 56/194 (28%)
Query: 585 HLY--VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKM 641
L V K P + V +Y+ G L S L K F + + ++ + M
Sbjct: 110 RLEGVVTKSKP---VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
G++HRD+ NILI+ + K++DFGL R + G+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLG---RVLEDDPEAAYTTRGGK------------ 211
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 761
P++ + +PE + +T D WS G
Sbjct: 212 -----------IPIR-----------------------WTSPEAIAYRKFTSASDVWSYG 237
Query: 762 VILYEML-VGSPPF 774
++L+E++ G P+
Sbjct: 238 IVLWEVMSYGERPY 251
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 57.2 bits (139), Expect = 5e-09
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
M+ H ++ + +M+ G+L S L K + Y +L+
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY+++
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKASK 176
Score = 33.4 bits (77), Expect = 0.27
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE + +T D W GV ++E+L G PF
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol,
transferase; 2.00A {Oryza sativa japonica group}
Length = 483
Score = 58.5 bits (141), Expect = 6e-09
Identities = 36/141 (25%), Positives = 48/141 (34%), Gaps = 38/141 (26%)
Query: 570 GAFGEVTLVRKIDTNHLYVMKG----SPHNNL---------------------------- 597
G+FGE+ L I TN +K + H L
Sbjct: 18 GSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDY 77
Query: 598 -YFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
VMD + G L L ++ VE VH F+HRDIKPDN L+
Sbjct: 78 NVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136
Query: 656 DRDGH---IKLTDFGLCTGFR 673
+ + DFGL +R
Sbjct: 137 GLGRRANQVYIIDFGLAKKYR 157
Score = 31.5 bits (71), Expect = 1.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKT 483
F + IG G+FGE+ L I TN A+K
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL 39
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein,
abnormal nuclear; zinc-finger, beta barrel, VWA domain,
gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP:
a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Length = 926
Score = 59.1 bits (142), Expect = 6e-09
Identities = 35/190 (18%), Positives = 49/190 (25%), Gaps = 2/190 (1%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P + + + S G P PS P Q
Sbjct: 12 AQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQE-QLH 70
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPS-PVPTTEPPS 267
Q Q M + V + P P + +QQQQQ P+ P+
Sbjct: 71 QQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQ 130
Query: 268 YASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTP 327
M L + T P T P +R P + + SP ST + P
Sbjct: 131 NMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSNASPDYIRSTLNAVP 190
Query: 328 PLPPTTSSSV 337
S
Sbjct: 191 KNSSLLKKSK 200
Score = 57.5 bits (138), Expect = 2e-08
Identities = 25/195 (12%), Positives = 45/195 (23%), Gaps = 21/195 (10%)
Query: 150 YPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQ 209
+ P Y + Q P Q + G + +PP P
Sbjct: 3 HHKKRVYPQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFL 62
Query: 210 AKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYA 269
Q + + Q + ++ + QP PV P
Sbjct: 63 TPAQE----------QLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQ 112
Query: 270 STMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPL 329
A + + + + P D +E P + PPL
Sbjct: 113 QQPMA-----------APAYGQPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPL 161
Query: 330 PPTTSSSVNNKNMTN 344
+ ++N
Sbjct: 162 VIPPERMLVPSELSN 176
Score = 29.0 bits (64), Expect = 8.4
Identities = 13/114 (11%), Positives = 23/114 (20%), Gaps = 1/114 (0%)
Query: 246 SIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRK 305
S +++ PQ P Q + A + + Q++
Sbjct: 2 SHHKKRVYPQAQLQYGQNATP-LQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQ 60
Query: 306 FSPGDSRSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSP 359
F +T S N M + Q
Sbjct: 61 FLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQ 114
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 56.5 bits (137), Expect = 1e-08
Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 53/187 (28%)
Query: 585 HLY-VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMG 642
V + NL +M+Y+P G L L K K + Y +++ +E +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW-THNSKYYQSNGDHGRQDSMEPSEEWSQ 701
+IHRD+ NIL++ + +K+ DFGL + + ++++ G
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLT---KVLPQDKEFFKVKE-PGE------------ 178
Query: 702 GTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 761
SP+ + APE L + ++ D WS G
Sbjct: 179 -----------SPIF-----------------------WYAPESLTESKFSVASDVWSFG 204
Query: 762 VILYEML 768
V+LYE+
Sbjct: 205 VVLYELF 211
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 56.0 bits (136), Expect = 1e-08
Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 25/157 (15%)
Query: 543 GVFGEVTLVRKIDTNHLYV-MKTI---YKCVGAF-GEVTLVRKIDTNH---LY--VMKGS 592
G FG V V +K I F E + K+ Y K
Sbjct: 19 GQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA----VESVHKMGFIHRDI 648
P +Y V +YI G L++ L G EP + C +ES FIHRD+
Sbjct: 77 P---IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDL 130
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
N L+DRD +K++DFG+ R+ + +Y S G
Sbjct: 131 AARNCLVDRDLCVKVSDFGMT---RYVLDDQYVSSVG 164
Score = 34.1 bits (79), Expect = 0.14
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
APEV Y+ D W+ G++++E+ +G P+ T++E KV
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 56.6 bits (137), Expect = 1e-08
Identities = 48/200 (24%), Positives = 75/200 (37%), Gaps = 56/200 (28%)
Query: 574 EVTLVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + +L VM+Y+P G L L + I L F
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF-AQ 141
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW-THNSKYYQSNGDHG 688
++ + +H +IHRD+ N+L+D D +K+ DFGL + +YY+ G
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA---KAVPEGHEYYRVRE-DG 197
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 198 D-----------------------SPVF-----------------------WYAPECLKE 211
Query: 749 TGYTQLCDWWSVGVILYEML 768
+ D WS GV LYE+L
Sbjct: 212 YKFYYASDVWSFGVTLYELL 231
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 56.1 bits (136), Expect = 1e-08
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
+MK H ++ + +M+ P G+L L + K + Y ++
Sbjct: 65 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICK 124
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
A+ + + +HRDI NIL+ +KL DFGL R+ + YY+++
Sbjct: 125 AMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS---RYIEDEDYYKASV 173
Score = 33.7 bits (78), Expect = 0.21
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
+PE + +T D W V ++E+L G PF
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 56.6 bits (137), Expect = 1e-08
Identities = 41/180 (22%), Positives = 69/180 (38%), Gaps = 52/180 (28%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ NL +M+Y+P G L L K K + Y +++ +E + +IHRD+
Sbjct: 113 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLA 172
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRW-THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
NIL++ + +K+ DFGL + + +YY+ G
Sbjct: 173 TRNILVENENRVKIGDFGLT---KVLPQDKEYYKVKE-PGE------------------- 209
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
SP+ + APE L + ++ D WS GV+LYE+
Sbjct: 210 ----SPIF-----------------------WYAPESLTESKFSVASDVWSFGVVLYELF 242
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 56.2 bits (135), Expect = 4e-08
Identities = 53/193 (27%), Positives = 76/193 (39%), Gaps = 20/193 (10%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSP-SPIP-PTRPAPLQAWS 206
SP P +S SP PSS YS + SP SP PT P+ S
Sbjct: 1545 SAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPT-S 1603
Query: 207 SRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPP 266
+ T P S +P PS PTS PSYS + P SP + P
Sbjct: 1604 PSYSATSPSYSPTSPSYSPT-SPSYS----PTS-PSYSPT----SPSYSPTSPSYSPTSP 1653
Query: 267 SYASTMQAL-ATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSE--SPASASSTE 323
SY+ T + TS + + P + T+ + +P P +SP SP+ + ++
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----SYSPTSPSYSPTSPSYSPTSP 1709
Query: 324 SRTPPLPPTTSSS 336
S +P P + +S
Sbjct: 1710 SYSPTSPSYSPTS 1722
Score = 51.6 bits (123), Expect = 1e-06
Identities = 53/229 (23%), Positives = 75/229 (32%), Gaps = 28/229 (12%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSP-SPIPPTRPAPLQAWSS 207
+ P SP S S Y + SP SP T P S
Sbjct: 1518 GFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSP-AYMPSSP 1576
Query: 208 RQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSP------PSYSSSIQQQQQKPQPPSPVP 261
+ T P S +P + +PTSP PSYS + P PS P
Sbjct: 1577 SYSPTSPSYSPTSPSYSPT-----SPSYSPTSPSYSATSPSYSPT--SPSYSPTSPSYSP 1629
Query: 262 TTEPPSYASTMQALA--------TSRVATISIPESNTTTTTTTPAHPLLQRKF--SPGDS 311
T PSY+ T + + TS + + P + T+ + +P P S
Sbjct: 1630 T--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1687
Query: 312 RSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSPI 360
S SP S S + + +P PT+ S + T + SP
Sbjct: 1688 PSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1735
Score = 47.4 bits (112), Expect = 2e-05
Identities = 53/221 (23%), Positives = 84/221 (38%), Gaps = 20/221 (9%)
Query: 149 PY-PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTR-PAPLQAWS 206
PY SP S A+ S S + G G+ SP + P +S
Sbjct: 1485 PYERSPMVDSGFVGSPDAAAFSPLVQGGSEGREGFGDYGLLGAASPYKGVQSPGYTSPFS 1544
Query: 207 SRQAKTQPVVIMQSVKSTPVQKPSLQT-----AIAPTSPPSYSSSIQQQQQKPQPPSPVP 261
S + + S+P S + +PTSP +S P PS P
Sbjct: 1545 SAMSPGYGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTS---PSYSPTSPSYSP 1601
Query: 262 TTEPPSYASTMQALA-TSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASA- 319
T+ PSY++T + + TS + + P + T+ + +P P +SP S S SP S
Sbjct: 1602 TS--PSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP----SYSPT-SPSYSPTSPS 1654
Query: 320 -SSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSP 359
S T P P+ S + + + T+ + + + SP
Sbjct: 1655 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 37.7 bits (87), Expect = 0.021
Identities = 39/177 (22%), Positives = 54/177 (30%), Gaps = 14/177 (7%)
Query: 165 ASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKST 224
S+ + G P G+P P S A P + S
Sbjct: 1459 YSLGTAVPTLAGSGMGTSQLPEGAGTPYERSPMVD-SGFVGSPDAAAFSP---LVQGGSE 1514
Query: 225 PVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATIS 284
+ + SP S SP PSY+ + +TS S
Sbjct: 1515 GREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPAYMPS 1574
Query: 285 IPESNTTTTTTTPAHPLLQRKFSPGDSRSESPAS-----ASSTESRTPPLPPTTSSS 336
P + T+ + +P P +SP S S SP S S + S T P TS S
Sbjct: 1575 SPSYSPTSPSYSPTSP----SYSPT-SPSYSPTSPSYSATSPSYSPTSPSYSPTSPS 1626
Score = 33.9 bits (77), Expect = 0.29
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 150 YPSPAAAPPPPPSYSASIQ--SRQSPTQSPSSGIYSGPGSTGSP-SPIP-PTRPA 200
P+ + P PSYS + S SP+ SP+S YS + SP SP PT P+
Sbjct: 1691 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1745
Score = 31.6 bits (71), Expect = 1.5
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Query: 140 DYIPGEKLIPYPSPAAAPPPP------PSYS--ASIQSRQSPTQSPSSGIYSGPGSTGSP 191
Y P SP+ +P P PSYS + S SP+ SP+S YS ++ S
Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS--PTSPSY 1746
Query: 192 SPIPPT 197
SP P+
Sbjct: 1747 SPTSPS 1752
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 54.2 bits (131), Expect = 6e-08
Identities = 36/203 (17%), Positives = 68/203 (33%), Gaps = 65/203 (32%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
+M + + VM+ GG L L+ + + +++
Sbjct: 62 QIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 121
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW-THNSKYYQSNGDHGRQDS 692
++ + + F+HRD+ N+L+ + K++DFGL + + YY + G+
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLS---KALGADDSYYTARS-AGK--- 174
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
PLK + APE + ++
Sbjct: 175 --------------------WPLK-----------------------WYAPECINFRKFS 191
Query: 753 QLCDWWSVGVILYEML-VGSPPF 774
D WS GV ++E L G P+
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPY 214
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 55.1 bits (133), Expect = 6e-08
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAF-----GEVTLVRKI------DTNHLYVMKG 591
G FG+V + +K + + F E+ ++ + +T ++ M
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166
Query: 592 S--PHNNLYFVMDYIPGGDLMSL----LIKKGIFE---EPLARFYIAELTCAVESVHKMG 642
+ N++ + L+S+ LIKK F+ PL R + + ++++HK
Sbjct: 167 NFTFRNHICMTFE------LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR 220
Query: 643 FIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHNSKYYQS 683
IH D+KP+NIL+ + G IK+ DFG + Y QS
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSC-YEHQRVYTYIQS 262
Score = 54.0 bits (130), Expect = 2e-07
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
Y APEV+L Y D WS+G IL E+L G P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 55.9 bits (134), Expect = 7e-08
Identities = 52/204 (25%), Positives = 69/204 (33%), Gaps = 9/204 (4%)
Query: 139 MDYIPGEKLIPYPSPAAAPPPPPSYSASIQSR----QSPTQSPSSGIYSGPGSTGSP-SP 193
Y + A P S + S SPT SP+S YS + SP SP
Sbjct: 1509 TAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSP 1568
Query: 194 -IPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQ 252
PT P+ S + T P S +P PS SP S S S
Sbjct: 1569 SYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYSPTSPSYSPTSPSY 1626
Query: 253 KPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSR 312
P PS PT+ P ++ TS + + P + T+ + +P P
Sbjct: 1627 SPTSPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1685
Query: 313 SESPASASSTESRTPPLPPTTSSS 336
S S + S S T P TS
Sbjct: 1686 SPSYSPTSPNYSPTSPSYSPTSPG 1709
Score = 53.6 bits (128), Expect = 3e-07
Identities = 43/208 (20%), Positives = 69/208 (33%), Gaps = 14/208 (6%)
Query: 143 PGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPL 202
P + +S + S + + Y G + SP AP
Sbjct: 1472 PYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYGEAPT 1531
Query: 203 ----QAWSSRQAKTQPVVIMQSVKSTPVQKPSLQT--AIAPTSPP--SYSSSIQQQQQKP 254
S + T P S +P T + +PTSP S S
Sbjct: 1532 SPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1591
Query: 255 QPPSPVPTTEPPSYASTMQAL-ATSRVATISIPESNTTTTTTTPAHPLLQR---KFSPGD 310
P SP + PSY+ T + TS + + P + T+ + +P P +SP
Sbjct: 1592 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 311 SRS--ESPASASSTESRTPPLPPTTSSS 336
SPA + ++ S +P P + +S
Sbjct: 1652 PSYSPTSPAYSPTSPSYSPTSPSYSPTS 1679
Score = 48.2 bits (114), Expect = 1e-05
Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 13/146 (8%)
Query: 139 MDYIPGEKLIPYPSPAAAPPPP-PSYSASIQSRQSPTQSPSSGIYSGPGSTGSP-SPIPP 196
Y P SP+ +P P S ++ S SP+ SP+S YS + SP SP
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1641
Query: 197 TRPAPLQAWSSRQAKTQPVVIMQSVK---STPVQKPS------LQTAIAPTSPPSYSSSI 247
S + T P S ++P P+ + +PTSP +S
Sbjct: 1642 PTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Query: 248 QQQQQKPQ--PPSPVPTTEPPSYAST 271
P P SP + +
Sbjct: 1702 SYSPTSPGYSPGSPAYSPKQDEQKHN 1727
Score = 36.2 bits (83), Expect = 0.064
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 150 YPSPAAAPPPPPSYSAS--IQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTR 198
P+ + P P+YS + S SP SP S YS + +R
Sbjct: 1683 SPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSPKQDEQKHNENENSR 1733
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 53.9 bits (130), Expect = 8e-08
Identities = 47/242 (19%), Positives = 88/242 (36%), Gaps = 66/242 (27%)
Query: 543 GVFGEV---TLVRKIDTNHLYV-MKTIYKCVG-----AF-GEVTLVRKIDTNHLYVMKG- 591
G FG+V + D V +K++ G E+ ++R + ++ KG
Sbjct: 32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI 91
Query: 592 ---SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
N + +M+++P G L L K K Y ++ ++ + ++HRD
Sbjct: 92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRD 151
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTH-NSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
+ N+L++ + +K+ DFGL + + +YY
Sbjct: 152 LAARNVLVESEHQVKIGDFGLT---KAIETDKEYYTVKD-DRD----------------- 190
Query: 707 ECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
SP+ + APE L+++ + D WS GV L+E
Sbjct: 191 ------SPVF-----------------------WYAPECLMQSKFYIASDVWSFGVTLHE 221
Query: 767 ML 768
+L
Sbjct: 222 LL 223
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 53.0 bits (128), Expect = 1e-07
Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 40/151 (26%)
Query: 570 GAFGEV--------------TLVRKIDTNHL-------YVMKGSPHNNL----------- 597
G FG V T+ + VM H L
Sbjct: 19 GQFGLVHLGYWLNKDKVAIKTI--REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA 76
Query: 598 --YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
V +++ G L L +G+F ++ + + + IHRD+ N L
Sbjct: 77 PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCL 136
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + IK++DFG+ R+ + +Y S G
Sbjct: 137 VGENQVIKVSDFGMT---RFVLDDQYTSSTG 164
Score = 34.1 bits (79), Expect = 0.14
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
+PEV + Y+ D WS GV+++E+ G P+ +++E +
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 53.5 bits (129), Expect = 1e-07
Identities = 42/216 (19%), Positives = 73/216 (33%), Gaps = 65/216 (30%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNN---LYFVMDYIPGGDLMSLLIKKGIFEEPLAR 625
E +++ D H L ++ ++ ++ GDL + L+ I E P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 626 FYIAELTCAVESVHKM------GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK 679
+ V+ M FIHRD+ N ++ D + + DFGL R ++
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGD 191
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPN 739
YY+ G + P+K
Sbjct: 192 YYRQ-GCASKL-----------------------PVK----------------------- 204
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
++A E L YT D W+ GV ++E++ G P+
Sbjct: 205 WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY 240
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 53.5 bits (129), Expect = 2e-07
Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 51/186 (27%)
Query: 585 HLY-VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMG 642
V G +L VM+Y+P G L L + + + Y +++ +E +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ NIL++ + H+K+ DFGL + K Y + G+
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLA---KLLPLDKDYYVVREPGQ------------- 191
Query: 703 TPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
SP+ + APE L +++ D WS GV
Sbjct: 192 ----------SPIF-----------------------WYAPESLSDNIFSRQSDVWSFGV 218
Query: 763 ILYEML 768
+LYE+
Sbjct: 219 VLYELF 224
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 52.6 bits (127), Expect = 2e-07
Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
VM+ + + VM+ G L L + ++ + +++
Sbjct: 70 NVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG 129
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
++ + + F+HRD+ N+L+ + K++DFGL
Sbjct: 130 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 163
Score = 33.0 bits (76), Expect = 0.42
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
APE + ++ D WS GV+++E G P+ +E +
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 53.0 bits (128), Expect = 2e-07
Identities = 41/197 (20%), Positives = 64/197 (32%), Gaps = 70/197 (35%)
Query: 600 VMDYIPGGDLMSLLIKKGIFEEPL---ARFYIAELTCA--VESVHKMGFIHRDIKPDNIL 654
+ Y+ G+L L + + R I + A + +H IHRD+K NIL
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC-IGAARGLHYLHTRAIIHRDVKSINIL 171
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS------QGTPGQEC 708
+D + K+TDFG+ SK + + +GT G
Sbjct: 172 LDENFVPKITDFGI---------SKKG-------------TELDQTHLSTVVKGTLG--- 206
Query: 709 RCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEM 767
YI PE G T+ D +S GV+L+E+
Sbjct: 207 -------------------------------YIDPE-YFIKGRLTEKSDVYSFGVVLFEV 234
Query: 768 LVGSPPFLANTSAETQY 784
L + + E
Sbjct: 235 LCARSAIVQSLPREMVN 251
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 53.6 bits (129), Expect = 2e-07
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 42/167 (25%)
Query: 554 IDTNHLYVMKTIYKCVGAFGEV--------------TLVRKIDTNHL-------YVMKGS 592
I L + K + G FGEV T+ K + + VMK
Sbjct: 185 IPRESLKLEKKLGA--GQFGEVWMATYNKHTKVAVKTM--KPGSMSVEAFLAEANVMKTL 240
Query: 593 PHNNL------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESV 638
H+ L Y + +++ G L+ L ++PL + + A++ + +
Sbjct: 241 QHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ +IHRD++ NIL+ K+ DFGL R +++Y G
Sbjct: 301 EQRNYIHRDLRAANILVSASLVCKIADFGLA---RVIEDNEYTAREG 344
Score = 32.4 bits (74), Expect = 0.67
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE + +T D WS G++L E++ G P+
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 53.2 bits (128), Expect = 2e-07
Identities = 18/35 (51%), Positives = 20/35 (57%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
Y +PEVLL Y D WS+G IL EM G P F
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
Score = 51.3 bits (123), Expect = 9e-07
Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 34/166 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAF-----GEVTLVRKI------DTNHLYVMKG 591
G FG+V +K I K AF EV L+ + ++ +K
Sbjct: 65 GSFGQVVKAYDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123
Query: 592 S--PHNNLYFVMDYIPGGDLMSL----LIKK----GIFEEPLARFYIAELTCAVESVH-- 639
N+L V + ++S L++ G L R + ++ A+ +
Sbjct: 124 HFMFRNHLCLVFE------MLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMCTALLFLATP 176
Query: 640 KMGFIHRDIKPDNILIDRDGH--IKLTDFGLCTGFRWTHNSKYYQS 683
++ IH D+KP+NIL+ IK+ DFG + +Y QS
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLGQRIYQYIQS 221
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 52.7 bits (127), Expect = 2e-07
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 585 HLY--VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKM 641
L + K P + + +Y+ G L L + G F + + ++ + M
Sbjct: 110 RLEGVISKYKP---MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 642 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
++HRD+ NIL++ + K++DFGL + Y ++G
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGL-SRVLEDDPEATYTTSG 209
Score = 34.2 bits (79), Expect = 0.20
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE + +T D WS G++++E++ G P+
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 53.4 bits (128), Expect = 2e-07
Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 67/204 (32%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELT 632
+M + + VM+ GG L L+ K I +A + +++
Sbjct: 388 QIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL-LHQVS 446
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW-THNSKYYQSNGDHGRQD 691
++ + + F+HR++ N+L+ + K++DFGL + + YY + G+
Sbjct: 447 MGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS---KALGADDSYYTARS-AGK-- 500
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGY 751
PLK + APE + +
Sbjct: 501 ---------------------WPLK-----------------------WYAPECINFRKF 516
Query: 752 TQLCDWWSVGVILYEML-VGSPPF 774
+ D WS GV ++E L G P+
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPY 540
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 52.2 bits (126), Expect = 3e-07
Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 40/151 (26%)
Query: 570 GAFGEV--------------TLVRKIDTNHL-------YVMKGSPHNNL----------- 597
G FGEV +L K + +MK H L
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP 81
Query: 598 -YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 142 VSDTLSCKIADFGLA---RLIEDNEYTAREG 169
Score = 33.7 bits (78), Expect = 0.24
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE + +T D WS G++L E++ G P+
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 52.2 bits (126), Expect = 3e-07
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 588 VMKGSPHNNL-------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
VM H L + + +Y+ G L++ L + + F+ ++
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
A+E + F+HRD+ N L++ G +K++DFGL R+ + +Y S G
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVG 180
Score = 34.1 bits (79), Expect = 0.17
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
PEVL+ + ++ D W+ GV+++E+ +G P+ T++ET +
Sbjct: 189 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 52.9 bits (126), Expect = 5e-07
Identities = 58/409 (14%), Positives = 107/409 (26%), Gaps = 117/409 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLY--- 598
V F E L N+ ++M I + + + M + LY
Sbjct: 79 VQKFVEEVL----RINYKFLMSPIKT-----------EQRQPSMMTRMYIEQRDRLYNDN 123
Query: 599 --FVMDYIPGGDLMSLLIKKGIFE-EPLARFYIAELTCAVESVHKM-GF--------IHR 646
F + L +++ + E P + + + G +
Sbjct: 124 QVFAKYNVSRLQPY-LKLRQALLELRPAK--NVL--------IDGVLGSGKTWVALDVCL 172
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFR---------WTHNSKYYQSNGDHGRQDSMEPSE 697
K + D I + C + S DH +
Sbjct: 173 SYK---VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 698 EWSQGTPGQECRCINSPLKPLERR--RRREHQRCLAHSL----VGTPNYIAP-----EVL 746
++ RR + + ++ CL L V ++L
Sbjct: 230 -----------------IQAELRRLLKSKPYENCL---LVLLNVQNAKAWNAFNLSCKIL 269
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW--ESCLHIPAEA-QLSP 803
L T + Q+ D+ S + L L T E + ++ + +P E +P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTL--TPDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 804 EGADLILQLCTGADKRLGKNASEVKAHPFFSNVD--FEKGVRTLTPP------------- 848
L + R G + H + E + L P
Sbjct: 328 ----RRLSII-AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 849 ---HIPRIQNSMDTSNFDPVDP----DKLRNSDSMLDELSDELKSPFHG 890
HIP I S+ + D +KL S++++ E
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY-SLVEKQPKESTISIPS 430
Score = 43.7 bits (102), Expect = 3e-04
Identities = 97/704 (13%), Positives = 191/704 (27%), Gaps = 214/704 (30%)
Query: 29 DNEWVVKLYYSFQGDIFILVGLWVNTMEYALAARVLKSILGESTTEVDNEIRLIDTNHLY 88
D E + Y ++ + + +V+ + + KSIL S E+D+ I D
Sbjct: 8 DFE-TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSIL--SKEEIDHIIMSKDA---- 60
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
TLR L Q E +V+ + + N F+M I E+
Sbjct: 61 VSGTLRLFWTLLSKQ----------------EEMVQKFVEEVLRINYKFLMSPIKTEQRQ 104
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPP---TRPAP---L 202
P Y ++ +R P L
Sbjct: 105 P-------SMMTRMYI----EQRDRLY-------------NDNQVFAKYNVSRLQPYLKL 140
Query: 203 QAWSSRQAKTQPVVI--MQSV-KSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSP 259
+ + V+I + K+ + + +
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVA-----------------LDVCLSYKVQCKMDFK 183
Query: 260 V------PTTEPPSYASTMQAL-------ATSRVATISIPESNTTTTTTTPAHPLLQRKF 306
+ P + +Q L TSR S + + L + +
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 307 SPG-----DSRSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSPIP 361
+ ++ +A + + L TT K +T+ T H S
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKI--L-LTT----RFKQVTDFLSAATTT---HISLDH 293
Query: 362 ERKHMTKEK-------------EDERRE-CKVKNYSPQAFKFFMEQHIENVIKSHKQRV- 406
+T ++ +D RE +P+ E I+
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT---NPRRLSIIAES-----IRDGLATWD 345
Query: 407 -FRRLQLETEMAKIGLSAEAQ--CQMRKMLSQKESNYIRLKRAKMDKSMF---IKIKPIG 460
++ + + I S + RKM + RL S+F I P
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKM-------FDRL-------SVFPPSAHI-PTI 390
Query: 461 V-------GAFGEV----------TLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTN 503
+ +V +LV K ++ +IY L K+
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY----------LELKVKLE 440
Query: 504 HLYVM-KTI---YKCVGAFGEVTLVRKIDTNHL-------YVMKTI-Y--KCVGVFGEVT 549
+ Y + ++I Y + + D++ L Y I + K + +T
Sbjct: 441 NEYALHRSIVDHYN---------IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491
Query: 550 LVRKIDTNHLYVMKTI----YKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIP 605
L R + + ++ + I + + ++++ Y+ P
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV------ 545
Query: 606 GGDLMSLLIKKGIFEEPLARFYIAELTCAVESV--HKMGFIHRD 647
++ L K EE L ++ T + + I +
Sbjct: 546 -NAILDFLPK---IEENL---ICSKYTDLLRIALMAEDEAIFEE 582
Score = 36.8 bits (84), Expect = 0.039
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 363 RKHMTK-EKEDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKIGL 421
+ ++ + + ER + + F+ + EN+I S + R+ L E I
Sbjct: 531 KPYICDNDPKYERLVNAILD--------FLPKIEENLICSKYTDLL-RIALMAEDEAIFE 581
Query: 422 SAEAQCQ 428
A Q Q
Sbjct: 582 EAHKQVQ 588
Score = 31.7 bits (71), Expect = 1.3
Identities = 72/511 (14%), Positives = 137/511 (26%), Gaps = 165/511 (32%)
Query: 5 RKADVLK-RNQVAHVKAERDIL-------------AEADNEWVVKLYYSFQGDIFILVGL 50
R LK R + ++ +++L + + V+ F+ IF
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK--IF----- 185
Query: 51 WVNTMEYALAARVLK-------SILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQ 103
W+N VL+ I T+ D+ + H +++ +LK
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH--SIQA-ELRRLLKSKP 242
Query: 104 VAHVKAERDILAEADNEWVVKLYYSF----------QDKDNLYFVMDYIPGEKLIPYPSP 153
+ +L N K + +F + K V D++
Sbjct: 243 --YENC-LLVL---LNVQNAKAWNAFNLSCKILLTTRFKQ----VTDFLSAATTTHISLD 292
Query: 154 AAAPPPPPSYSASIQSR---QSPTQSPSSGIYSGPGSTGSP---SPIP---PTRPAPLQA 204
+ P S+ + P P + T +P S I A
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVL------TTNPRRLSIIAESIRDGLATWDN 346
Query: 205 WSSRQAKTQPVVIMQSVKSTPVQKPSL------QTAIAPTSPPSYSSSIQQQQQKPQPPS 258
W +I S+ V +P+ + ++ P S+ I P+
Sbjct: 347 WKHVNCDKLTTIIESSLN---VLEPAEYRKMFDRLSVFP-----PSAHI---------PT 389
Query: 259 PV--------PTTEPPSYASTMQ--ALATSRVA--TISIPESNTTTTTTTPAHPLLQRKF 306
+ ++ + + +L + TISIP L R
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI 449
Query: 307 SPGDSRSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSPIPERKHM 366
V++ N+ +T+ + P
Sbjct: 450 ------------------------------VDHYNIP------KTFDSDDLIPPYL---- 469
Query: 367 TKEKEDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEM--AKI---GL 421
D Y F + H++N+ + +FR + L+ KI
Sbjct: 470 -----D--------QY----FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST 512
Query: 422 SAEAQCQMRKMLSQ--KESNYIRLKRAKMDK 450
+ A + L Q YI K ++
Sbjct: 513 AWNASGSILNTLQQLKFYKPYICDNDPKYER 543
Score = 29.8 bits (66), Expect = 5.3
Identities = 25/199 (12%), Positives = 56/199 (28%), Gaps = 58/199 (29%)
Query: 2 KTLRKADVLKRNQVAHVKAERDILAEADNEWVV--------------KLYYS----FQGD 43
TLR L Q V+ + + + ++++ ++Y D
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND 122
Query: 44 IFILVGLWVNTMEYALAARVLKSILGESTTEVDNEIRLIDTNHLYAM----KTLRKADVL 99
+ V+ ++ L L+ L E+ ++ + + KT +
Sbjct: 123 NQVFAKYNVSRLQPYLK---LRQAL----LELRPAKNVL----IDGVLGSGKT-----WV 166
Query: 100 KRNQVAHVKAERDILAEADNE--WVVKLYYSFQDKD------NLYFVMDYIPGEKLIPYP 151
V + + D + W + L + L + +D +
Sbjct: 167 ----ALDVCLSYKVQCKMDFKIFW-LNLKNCNSPETVLEMLQKLLYQIDP-------NWT 214
Query: 152 SPAAAPPPPPSYSASIQSR 170
S + SIQ+
Sbjct: 215 SRSDHSSNIKLRIHSIQAE 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 51.9 bits (125), Expect = 5e-07
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
Y PEV+L G+ Q CD WS+G IL+E G F
Sbjct: 205 YRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239
Score = 45.0 bits (107), Expect = 8e-05
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 46/180 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-----EVTLVRKI------DTNHLYVMKG 591
G FG+V V I + VG + E+ +++KI + +M
Sbjct: 30 GTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSD 89
Query: 592 S--PHNNLYFVMDYIPGGDLMSL----LIKKGIFE---EPLARFYIAELTCAVESVHKMG 642
H ++ + L+ +K+ F+ P R +L A+ +H+
Sbjct: 90 WFNFHGHMCIAFE------LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ 143
Query: 643 FIHRDIKPDNILI-------------------DRDGHIKLTDFGLCTGFRWTHNSKYYQS 683
H D+KP+NIL ++ I++ DFG T F H++ +
Sbjct: 144 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTTIVAT 202
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 51.5 bits (124), Expect = 6e-07
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
Y APEV+L G++Q CD WS+G IL E +G F
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Score = 43.4 bits (103), Expect = 2e-04
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 48/181 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYV-MKTIYKCVGAF-----GEVTLVRKI------DTNHLYVMK 590
G FG+V +V +K + K V + E+ ++ + T M
Sbjct: 25 GAFGKVVECIDHKAGGRHVAVKIV-KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML 83
Query: 591 GS--PHNNLYFVMDYIPGGDLMSL----LIKKGIFE---EPLARFYIAELTCAVESVHKM 641
H ++ V + L+ L IK+ F R ++ +V +H
Sbjct: 84 EWFEHHGHICIVFE------LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137
Query: 642 GFIHRDIKPDNILIDRDGH-------------------IKLTDFGLCTGFRWTHNSKYYQ 682
H D+KP+NIL + + IK+ DFG T + H+S
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT-YDDEHHSTLVS 196
Query: 683 S 683
+
Sbjct: 197 T 197
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 50.7 bits (122), Expect = 8e-07
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 18/114 (15%)
Query: 587 YVMKGSPHNNL-------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAEL 631
VMK H NL Y + +++ G+L+ L + E ++
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQI 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ A+E + K FIHRD+ N L+ + +K+ DFGL R Y G
Sbjct: 121 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS---RLMTGDTYTAHAG 171
Score = 33.8 bits (78), Expect = 0.21
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
APE L ++ D W+ GV+L+E+ G P+ ++ +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 49.7 bits (117), Expect = 9e-07
Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 5/126 (3%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P +P P + + +SPS + GP P P Q S
Sbjct: 4 PAATPEIRVNHEPEPAGGATPGATLPKSPSQ-LRKGPPVPPPPKHTPSKEVKQEQILSLF 62
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSY 268
+ P + +TP Q T P + + + S +P ++
Sbjct: 63 EDTFVP----EISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETF 118
Query: 269 ASTMQA 274
+T+
Sbjct: 119 PATVNG 124
Score = 47.8 bits (112), Expect = 4e-06
Identities = 23/155 (14%), Positives = 43/155 (27%), Gaps = 10/155 (6%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
SPAA P + P+ G G SPS + P P +
Sbjct: 2 GSPAATPEIRVN----------HEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSK 51
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYAS 270
+ + I+ + T V + S+ T P + Q +P + S
Sbjct: 52 EVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLP 111
Query: 271 TMQALATSRVATISIPESNTTTTTTTPAHPLLQRK 305
+ ++ + P + + +
Sbjct: 112 AVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQ 146
Score = 41.2 bits (95), Expect = 6e-04
Identities = 22/133 (16%), Positives = 35/133 (26%), Gaps = 8/133 (6%)
Query: 143 PGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPL 202
PG L PS PP P + +P++ I T P+
Sbjct: 24 PGATLPKSPSQLRKGPPVPP-----PPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQP 78
Query: 203 QAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPT 262
S TQP Q T + + + + + +
Sbjct: 79 AEASEVAGGTQPAAGAQEPGETAASEAA---SSSLPAVVVETFPATVNGTVEGGSGAGRL 135
Query: 263 TEPPSYASTMQAL 275
PP + +QA
Sbjct: 136 DLPPGFMFKVQAQ 148
Score = 39.3 bits (90), Expect = 0.003
Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 5/141 (3%)
Query: 190 SPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQ 249
+P P P A + T P Q K PV P T P+ +
Sbjct: 7 TPEIRVNHEPEP--AGGATPGATLPKSPSQLRKGPPVPPPPKHT---PSKEVKQEQILSL 61
Query: 250 QQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPG 309
+ P V T P+ AS + E+ + ++ ++ F
Sbjct: 62 FEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPAT 121
Query: 310 DSRSESPASASSTESRTPPLP 330
+ + S + P
Sbjct: 122 VNGTVEGGSGAGRLDLPPGFM 142
Score = 37.8 bits (86), Expect = 0.009
Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 2/141 (1%)
Query: 223 STPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVAT 282
+TP + + + A + P + Q + PP P P PS + + + T
Sbjct: 6 ATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDT 65
Query: 283 ISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSSVNNKNM 342
+ TT + PA + + ++ P +++E+ + LP +
Sbjct: 66 --FVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVN 123
Query: 343 TNGTGGGRTYKINHQSPIPER 363
GG +++ +
Sbjct: 124 GTVEGGSGAGRLDLPPGFMFK 144
Score = 35.1 bits (79), Expect = 0.067
Identities = 13/145 (8%), Positives = 35/145 (24%), Gaps = 1/145 (0%)
Query: 236 APTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTT 295
+P + P + + + P P + T S +
Sbjct: 3 SPAATPEIRVNHEPEPAGGATPGATLPKSPSQ-LRKGPPVPPPPKHTPSKEVKQEQILSL 61
Query: 296 TPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKIN 355
+ + + +E+ A T+ P +++ + + T+
Sbjct: 62 FEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPAT 121
Query: 356 HQSPIPERKHMTKEKEDERRECKVK 380
+ + KV+
Sbjct: 122 VNGTVEGGSGAGRLDLPPGFMFKVQ 146
Score = 29.3 bits (64), Expect = 4.4
Identities = 13/153 (8%), Positives = 31/153 (20%), Gaps = 14/153 (9%)
Query: 189 GSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQ 248
GSP+ P R + +P + +TP + PP
Sbjct: 2 GSPAATPEIRV---------NHEPEP-----AGGATPGATLPKSPSQLRKGPPVPPPPKH 47
Query: 249 QQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSP 308
++ + + E + + + +
Sbjct: 48 TPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAAS 107
Query: 309 GDSRSESPASASSTESRTPPLPPTTSSSVNNKN 341
+ + +T + T
Sbjct: 108 SSLPAVVVETFPATVNGTVEGGSGAGRLDLPPG 140
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 50.3 bits (121), Expect = 1e-06
Identities = 44/213 (20%), Positives = 72/213 (33%), Gaps = 84/213 (39%)
Query: 588 VMKGSPHNNL--------------YFVMDYIPGGDLMSLLIKKG--IFEEPLARF----- 626
+M+G H N+ + ++ Y+ GDL+ + + L F
Sbjct: 75 LMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVA 134
Query: 627 ----YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQ 682
Y+AE F+HRD+ N ++D +K+ DFGL R + +YY
Sbjct: 135 RGMEYLAE----------QKFVHRDLAARNCMLDESFTVKVADFGLA---RDILDREYYS 181
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIA 742
+ P+K + A
Sbjct: 182 VQQHRHAR----------------------LPVK-----------------------WTA 196
Query: 743 PEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
E L +T D WS GV+L+E+L G+PP+
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 50.3 bits (120), Expect = 1e-06
Identities = 64/335 (19%), Positives = 105/335 (31%), Gaps = 85/335 (25%)
Query: 457 KPIGVGAFGEV-----TLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDT-----NHLY 506
KP+G GAFG+V + K T A+K + + L+ ++ +HL
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 507 VMKTIYKCVGAFGEVTLV----RKID-TNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYV 561
V+ + C G + ++ + + + +L + + G K + V
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 562 MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDL--MSLLIKKGIF 619
+ + D++ L S + KG+
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGM- 206
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK 679
E LA IHRD+ NIL+ +K+ DFGL R +
Sbjct: 207 -EFLA---------------SRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDP 247
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPN 739
Y GD R PLK
Sbjct: 248 DYVRKGD-ARL-----------------------PLK----------------------- 260
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPP 773
++APE + YT D WS GV+L+E+ +G+ P
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 50.0 bits (120), Expect = 2e-06
Identities = 44/213 (20%), Positives = 73/213 (34%), Gaps = 84/213 (39%)
Query: 588 VMKGSPHNN--------------LYFVMDYIPGGDLMSLLIKKG--IFEEPLARF----- 626
+MK H N V+ Y+ GDL + + + + L F
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVA 138
Query: 627 ----YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQ 682
Y+A F+HRD+ N ++D +K+ DFGL R ++ +YY
Sbjct: 139 KGMKYLAS----------KKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYS 185
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIA 742
+ G + P+K ++A
Sbjct: 186 VHNKTGAK----------------------LPVK-----------------------WMA 200
Query: 743 PEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
E L +T D WS GV+L+E++ G+PP+
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid
cyclase fold, DDXXXXD motif, NDXXSXXXE MOT
methylisoborneol biosynthesis; HET: GST; 1.80A
{Streptomyces coelicolor} PDB: 3v1x_A*
Length = 433
Score = 50.1 bits (119), Expect = 2e-06
Identities = 18/128 (14%), Positives = 32/128 (25%), Gaps = 4/128 (3%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
+ P S + S P + P+P PP PA +
Sbjct: 9 HHSSGLVPRGSHMVIPSASV-TSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDTVTG 67
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPP---SPVPTTEPPS 267
+ I++ + P +S + P PVP +P
Sbjct: 68 DSVLQRILRGPTGPGTTSLAPAVRYGRQPGPEAPASAPPAAGRAVPGLYHHPVPEPDPVR 127
Query: 268 YASTMQAL 275
+ +
Sbjct: 128 VEEVSRRI 135
Score = 34.7 bits (79), Expect = 0.16
Identities = 14/116 (12%), Positives = 23/116 (19%), Gaps = 12/116 (10%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
+ + P P + + P + S PT P +
Sbjct: 34 DFLAALHPPVTVPDPAPPPPPAPAAGNPPDT---VTGDSVLQRILRGPTGPGTTSLAPAV 90
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTE 264
+ QP P S A P Y + +
Sbjct: 91 RYGRQP---------GPEAPASAPPAAGRAVPGLYHHPVPEPDPVRVEEVSRRIKR 137
Score = 34.0 bits (77), Expect = 0.23
Identities = 19/113 (16%), Positives = 29/113 (25%), Gaps = 3/113 (2%)
Query: 222 KSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVA 281
+ + S +S+ PP VP PP + V
Sbjct: 7 HHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDTVT 66
Query: 282 TISIPESNTTTTT---TTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPP 331
S+ + T TT P ++ PG S A+ P
Sbjct: 67 GDSVLQRILRGPTGPGTTSLAPAVRYGRQPGPEAPASAPPAAGRAVPGLYHHP 119
Score = 31.7 bits (71), Expect = 1.4
Identities = 25/150 (16%), Positives = 34/150 (22%), Gaps = 16/150 (10%)
Query: 171 QSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPS 230
S S SG GS IP A S A P V + P P
Sbjct: 3 SSHHHHHHS---SGLVPRGSHMVIPSASVTS--AASDFLAALHPPV------TVPDPAPP 51
Query: 231 LQTAIAP-TSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESN 289
A A P + + Q+ P P T+ P+ Q + +
Sbjct: 52 PPPAPAAGNPPDTVTGDSVLQRILRGPTGPGTTSLAPAVRYGRQPGPEAPAS----APPA 107
Query: 290 TTTTTTTPAHPLLQRKFSPGDSRSESPASA 319
H +
Sbjct: 108 AGRAVPGLYHHPVPEPDPVRVEEVSRRIKR 137
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 49.6 bits (119), Expect = 2e-06
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Query: 587 YVMKGSPHNNL------------YFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTC 633
M H NL V + P G L+ L K +G F Y ++
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + FIHRD+ N+L+ +K+ DFGL
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 33.4 bits (77), Expect = 0.26
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE L ++ D W GV L+EM G P+
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 49.1 bits (118), Expect = 2e-06
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 27/133 (20%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
E L ++ + L V K P L + Y GDL L+ + + +
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQP---LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 629 AELTCAVESVH----------------KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 672
+ A+E +H+D+ N+L+ ++K++D GL F
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL---F 175
Query: 673 RWTHNSKYYQSNG 685
R + + YY+ G
Sbjct: 176 REVYAADYYKLLG 188
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 49.6 bits (119), Expect = 2e-06
Identities = 39/225 (17%), Positives = 72/225 (32%), Gaps = 84/225 (37%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEP---- 622
E ++ + L ++ S ++ ++ GDL + L+ + P
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 623 ---LARF---------YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
L +F Y++ F+HRD+ N ++ D + + DFGL
Sbjct: 146 LQTLLKFMVDIALGMEYLSN----------RNFLHRDLAARNCMLRDDMTVCVADFGLS- 194
Query: 671 GFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQRCL 730
+ ++ YY+ G + P+K
Sbjct: 195 --KKIYSGDYYRQ-GRIAKM-----------------------PVK-------------- 214
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
+IA E L YT D W+ GV ++E+ G P+
Sbjct: 215 ---------WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY 250
>2wvr_C DNA replication factor CDT1; DNA replication license, DNA
replication inhibitor, phosphoprotein, UBL conjugation,
DNA-binding, polymorphism; HET: DNA; 3.30A {Homo
sapiens} PDB: 2klo_A*
Length = 546
Score = 50.1 bits (118), Expect = 3e-06
Identities = 47/295 (15%), Positives = 87/295 (29%), Gaps = 17/295 (5%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
P P PP + +R + S+ + P P R R
Sbjct: 15 PGPPRIAPPKLACRTPSPARPALRAPASAT---SGSRKRARPPAAPGRDQARPPARRRLR 71
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYAS 270
+ V S STP + + Q +E S
Sbjct: 72 LSVDEV---SSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQ 128
Query: 271 TMQALATS----RVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRT 326
+ L + + ES T P P ++ +P R + A
Sbjct: 129 RARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEK--APAYQRFHALAQPGLPGLVL 186
Query: 327 PPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSPIPERKHMTKEKEDERRECKVKNYSPQA 386
P + + + G R+ + M + + +ER ++K P +
Sbjct: 187 PYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPAS 246
Query: 387 FKFFMEQHIENVIKSHKQRVFR-----RLQLETEMAKIGLSAEAQCQMRKMLSQK 436
++F E+ + ++ ++ L+ E + A L+A Q R++ SQK
Sbjct: 247 YRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQK 301
Score = 40.5 bits (93), Expect = 0.002
Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 2/160 (1%)
Query: 172 SPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSL 231
+ + I + +PSP P AP A S + + +P ++ P + L
Sbjct: 11 ARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRL 70
Query: 232 QTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTT 291
+ ++ S PS + P P+ + TIS S
Sbjct: 71 RLSVDEVSSPSTPEA--PDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQ 128
Query: 292 TTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPP 331
A + + S +P + E P
Sbjct: 129 RARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAP 168
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 49.2 bits (118), Expect = 3e-06
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 27/134 (20%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNNLYFVMDYIPGGDLMSLL---------IKKGIF 619
E L+ + H Y G P L V +Y+ GDL L + G
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDP---LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 620 EEPLARFYIAELT-CAVESVHKM------GFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 672
+ ++++ A + M F+HRD+ N L+ + +K+ DFG+
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM---S 180
Query: 673 RWTHNSKYYQSNGD 686
R +++ YY+ G
Sbjct: 181 RDVYSTDYYRVGGH 194
Score = 30.3 bits (69), Expect = 2.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML 768
PE ++ +T D WS GVIL+E+
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEIF 229
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 48.8 bits (117), Expect = 4e-06
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 21/127 (16%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNNLYFVMDYIPGGDLMSLLIK---KGIFEEPLAR 625
E +++++ + +H L V +G P +M+ + GDL S L LA
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQP---TLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 626 FYIAELTCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNS 678
++++ + + F+HRD+ N ++ D +K+ DFG+ R + +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM---TRDIYET 191
Query: 679 KYYQSNG 685
YY+ G
Sbjct: 192 DYYRKGG 198
Score = 31.1 bits (71), Expect = 1.5
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
+PE L +T D WS GV+L+E+ + P+
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 48.9 bits (117), Expect = 6e-06
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 39/150 (26%)
Query: 554 IDTNHLYVMKTIYKCVGAFGEV-------------TLVRKIDTNH------LYVMKGSPH 594
++ L +++TI K G FG+V + K D VM H
Sbjct: 190 LNMKELKLLQTIGK--GEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRH 245
Query: 595 NNL--------------YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESV 638
+NL Y V +Y+ G L+ L +G + ++ A+E +
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
F+HRD+ N+L+ D K++DFGL
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
Score = 32.7 bits (75), Expect = 0.51
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
APE L ++ D WS G++L+E+ G P+
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 48.0 bits (115), Expect = 6e-06
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 37/134 (27%)
Query: 570 GAFGEV-------------TLVRKIDTNH------LYVMKGSPHNNL------------- 597
G FG+V + K D VM H+NL
Sbjct: 32 GEFGDVMLGDYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG 89
Query: 598 -YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESVHKMGFIHRDIKPDNIL 654
Y V +Y+ G L+ L +G + ++ A+E + F+HRD+ N+L
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL 149
Query: 655 IDRDGHIKLTDFGL 668
+ D K++DFGL
Sbjct: 150 VSEDNVAKVSDFGL 163
Score = 33.7 bits (78), Expect = 0.20
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
APE L ++ D WS G++L+E+ G P+ + +V
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 227
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 48.0 bits (115), Expect = 7e-06
Identities = 38/187 (20%), Positives = 56/187 (29%), Gaps = 66/187 (35%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVH----------------K 640
L ++++ G+L + L K P + H
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
IHRD+ NIL+ +K+ DFGL R + Y G R
Sbjct: 167 RKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKG-DARL---------- 212
Query: 701 QGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
PLK ++APE + YT D WS
Sbjct: 213 -------------PLK-----------------------WMAPETIFDRVYTIQSDVWSF 236
Query: 761 GVILYEM 767
GV+L+E+
Sbjct: 237 GVLLWEI 243
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 47.6 bits (114), Expect = 8e-06
Identities = 28/132 (21%), Positives = 43/132 (32%), Gaps = 35/132 (26%)
Query: 588 VMKG-SPHNN-------------LYFVMDYIPGGDLMSLLIKK-----------GIFEEP 622
V+ H N + +Y GDL++ L +K I E+
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 623 LARFYIAELTC-------AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 675
+ +L + + IHRD+ NIL+ K+ DFGL R
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA---RDI 195
Query: 676 HNSKYYQSNGDH 687
N Y G+
Sbjct: 196 KNDSNYVVKGNA 207
Score = 30.3 bits (69), Expect = 2.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEM 767
APE + YT D WS G+ L+E+
Sbjct: 215 APESIFNCVYTFESDVWSYGIFLWEL 240
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 47.7 bits (114), Expect = 8e-06
Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 32/135 (23%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
E L+ + H + +G P L V +Y+ GDL L G + LA
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRP---LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 629 AE---------LTCAV---------ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
L A + F+HRD+ N L+ + +K+ DFG+
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGM-- 204
Query: 671 GFRWTHNSKYYQSNG 685
R +++ YY+ G
Sbjct: 205 -SRDIYSTDYYRVGG 218
Score = 30.3 bits (69), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML 768
PE +L +T D WS GV+L+E+
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIF 254
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 47.6 bits (114), Expect = 9e-06
Identities = 38/219 (17%), Positives = 63/219 (28%), Gaps = 87/219 (39%)
Query: 586 LYVMKGSPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
V+K H + L +++Y G L L + + +
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 633 CAVESVHK------------------------MGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+++ + M +HRD+ NIL+ +K++DFGL
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 669 CTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRRRREHQR 728
R + Y GR P+K
Sbjct: 197 S---RDVYEEDSYVKRS-QGRI-----------------------PVK------------ 217
Query: 729 CLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
++A E L YT D WS GV+L+E+
Sbjct: 218 -----------WMAIESLFDHIYTTQSDVWSFGVLLWEI 245
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 47.6 bits (114), Expect = 9e-06
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGL 668
IHRD+K NIL+D + + DFGL
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGL 180
Score = 30.2 bits (69), Expect = 3.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
GT +IAPE L ++ D + GV+L E++ G F A ++
Sbjct: 196 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 47.3 bits (113), Expect = 1e-05
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 38/169 (22%)
Query: 543 GVFGEV------TLVRKIDTNHLYV-MKTIYKCVGA-----FGEVTLVRKIDTNH---LY 587
G F ++ + + V +K + K F +++ K+ H Y
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 588 --VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA----VESVHKM 641
+ G V +++ G L + L K L + +A+ A +E
Sbjct: 79 GVCVCGDE---NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---N 132
Query: 642 GFIHRDIKPDNILIDRDGH--------IKLTDFGLCTGFRWTHNSKYYQ 682
IH ++ NIL+ R+ IKL+D G+ Q
Sbjct: 133 TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS---ITVLPKDILQ 178
Score = 31.5 bits (72), Expect = 1.1
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 742 APEVLL-RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
PE + D WS G L+E+ G P A S
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 47.6 bits (114), Expect = 1e-05
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 20/113 (17%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG----- 642
G P + + +Y GDL++ L +K E F IA T + +
Sbjct: 119 CTHGGP---VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ 175
Query: 643 ---------FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IHRD+ N+L+ K+ DFGL R N Y G+
Sbjct: 176 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGN 225
Score = 29.2 bits (66), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEM 767
APE + YT D WS G++L+E+
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEI 259
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 47.5 bits (114), Expect = 1e-05
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGL 668
IHRDIK NIL+D K++DFGL
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGL 179
Score = 36.4 bits (85), Expect = 0.037
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 735 VGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSPPF 774
VGT Y+APE L G T D +S GV+L E++ G P
Sbjct: 196 VGTTAYMAPEAL--RGEITPKSDIYSFGVVLLEIITGLPAV 234
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 47.0 bits (112), Expect = 2e-05
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 19/106 (17%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVH----------------K 640
LY +++Y G+L L + + +
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IHRD+ N+L+ + +K+ DFGL R +N YY+ +
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKTTN 264
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 46.5 bits (111), Expect = 2e-05
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 21/128 (16%)
Query: 574 EVTLVRKIDTNH---LY--VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
E ++ K + + ++ P + +M+ + GGDL S L + + +
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLP---RFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 629 AELT-CAVESVHKM------GFIHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHNS 678
+L A + FIHRDI N L+ G K+ DFG+ R + +
Sbjct: 140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRA 196
Query: 679 KYYQSNGD 686
YY+ G
Sbjct: 197 SYYRKGGC 204
Score = 31.5 bits (72), Expect = 1.2
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVIN 788
PE + +T D WS GV+L+E+ +G P+ + ++ E V +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 260
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 47.0 bits (112), Expect = 2e-05
Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 588 VMKGSPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
++ H N + +++ + GGDL S L + + + +L
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 635 VESVHK-------MGFIHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSN 684
+ FIHRDI N L+ G K+ DFG+ R + + YY+
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYRKG 243
Query: 685 GD 686
G
Sbjct: 244 GC 245
Score = 31.6 bits (72), Expect = 1.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVIN 788
PE + +T D WS GV+L+E+ +G P+ + ++ E V +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS 301
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 46.5 bits (111), Expect = 2e-05
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 19/106 (17%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVH----------------K 640
LY +++Y G+L L + + +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IHRD+ N+L+ + +K+ DFGL R +N YY+ +
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKTTN 218
Score = 28.8 bits (65), Expect = 9.4
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEM--LVGSP-PFLAN 777
APE L YT D WS GV+++E+ L GSP P +
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 45.8 bits (109), Expect = 4e-05
Identities = 25/136 (18%), Positives = 40/136 (29%), Gaps = 40/136 (29%)
Query: 588 VMKG-SPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+M H N +Y + +Y GDL++ L K Y +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 634 AVESVHK-----------------------MGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
E +HRD+ N+L+ +K+ DFGL
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA- 219
Query: 671 GFRWTHNSKYYQSNGD 686
R + Y G+
Sbjct: 220 --RDIMSDSNYVVRGN 233
Score = 28.8 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEM 767
APE L YT D WS G++L+E+
Sbjct: 242 APESLFEGIYTIKSDVWSYGILLWEI 267
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 45.8 bits (109), Expect = 5e-05
Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 33/129 (25%)
Query: 588 VMKG-SPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
+MK H N LY +++Y G+L L + +
Sbjct: 127 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186
Query: 634 AVESVH----------------KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHN 677
+ S IHRD+ N+L+ D +K+ DFGL R H+
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHH 243
Query: 678 SKYYQSNGD 686
YY+ +
Sbjct: 244 IDYYKKTTN 252
Score = 28.9 bits (65), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEM 767
APE L YT D WS GV+L+E+
Sbjct: 261 APEALFDRIYTHQSDVWSFGVLLWEI 286
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 45.8 bits (109), Expect = 5e-05
Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 40/135 (29%)
Query: 588 VMKGSPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
+M + N + + +Y+ GDL L
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 635 VESVHK------------------------MGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
V S F+HRD+ N L+ + +K+ DFGL
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGL-- 220
Query: 671 GFRWTHNSKYYQSNG 685
R +++ YY+++G
Sbjct: 221 -SRNIYSADYYKADG 234
Score = 29.2 bits (66), Expect = 5.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML 768
PE + YT D W+ GV+L+E+
Sbjct: 244 PPESIFYNRYTTESDVWAYGVVLWEIF 270
>3iyo_A Capsid protein; amino acid sequence, cryoelectron microscopy,
dimerization, image processing, computer-assist
molecular sequence DATA; 10.50A {Hepatitis e virus}
Length = 660
Score = 46.1 bits (108), Expect = 5e-05
Identities = 32/195 (16%), Positives = 51/195 (26%), Gaps = 14/195 (7%)
Query: 150 YPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRP-APLQAWSSR 208
P+P P R+ S G + G P IP P P +
Sbjct: 17 LPAPPPGQPSGR--------RRGRRSGGSGGGFWGDRVDSQPFAIPYIHPTNPFAPDVTA 68
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPT--SPPSYSSSIQQQQQKPQPPSPVPTTEPP 266
A P V + + Q + P + ++ PVP +
Sbjct: 69 AAGAGPRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPAHDTPPVPDVDSR 128
Query: 267 SYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASS---TE 323
Q ++ T S+ P PLL + + AS +
Sbjct: 129 GAILRRQYNLSTSPLTSSVATGTNLVLYAAPLSPLLPLQDGTNTHIMATEASNYAQYRVA 188
Query: 324 SRTPPLPPTTSSSVN 338
T P ++V
Sbjct: 189 RATIRYRPLVPNAVG 203
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 44.7 bits (106), Expect = 1e-04
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 38/120 (31%)
Query: 587 YVMKGSPHNN--------------LYFVMDYIPGGDLMSLLIKKG--IFEEPLARF---- 626
+MK H N V+ Y+ GDL + + + + L F
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV 201
Query: 627 -----YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYY 681
++A F+HRD+ N ++D +K+ DFGL R ++ ++
Sbjct: 202 AKGMKFLAS----------KKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFD 248
Score = 29.3 bits (66), Expect = 6.2
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
A E L +T D WS GV+L+E++ G+PP+
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 44.2 bits (105), Expect = 1e-04
Identities = 40/187 (21%), Positives = 61/187 (32%), Gaps = 69/187 (36%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVH----------------K 640
LY ++Y P G+L+ L K + E A + S +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
FIHRD+ NIL+ + K+ DFGL + + Y GR
Sbjct: 161 KQFIHRDLAARNILVGENYVAKIADFGL------SRGQEVYVKKT-MGRL---------- 203
Query: 701 QGTPGQECRCINSPLKPLERRRRREHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
P++ ++A E L + YT D WS
Sbjct: 204 -------------PVR-----------------------WMAIESLNYSVYTTNSDVWSY 227
Query: 761 GVILYEM 767
GV+L+E+
Sbjct: 228 GVLLWEI 234
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin
regulator, histone inhibitor binding, methylation,
nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A
{Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A*
2xas_A* 2com_A
Length = 852
Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/208 (10%), Positives = 51/208 (24%), Gaps = 16/208 (7%)
Query: 162 SYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSV 221
+ +A+ + + T + +GPG+ G P + V
Sbjct: 7 AAAAAAAAAAAATGTE-----AGPGTAGGSENGSEVAAQP-----------AGLSGPAEV 50
Query: 222 KSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVA 281
V + + + P + P + PQ V + + R
Sbjct: 51 GPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRT 110
Query: 282 TISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSSVNNKN 341
+ L + ++ + R+ P PP + +
Sbjct: 111 SRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEE 170
Query: 342 MTNGTGGGRTYKINHQSPIPERKHMTKE 369
+ G ++ H + +
Sbjct: 171 PSGVEGAAFQSRLPHDRMTSQEAACFPD 198
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 42.7 bits (100), Expect = 7e-04
Identities = 74/521 (14%), Positives = 124/521 (23%), Gaps = 202/521 (38%)
Query: 41 QGDI--FILV--GLWVNTMEYALAARVLK----SILGESTTEVDNEIRLIDTNHLYAMKT 92
G + +LV + A L+ IL E T + L K
Sbjct: 13 HGSLEHVLLVPTASFF-------IASQLQEQFNKILPEPTEGFAADDEPTTPAELVG-KF 64
Query: 93 LRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKL--IPY 150
L +V + + + V+ L + F Y+ G + +
Sbjct: 65 L-----------GYVSSLVEPSKVGQFDQVLNL--CLTE-----FENCYLEGNDIHALAA 106
Query: 151 PSPAAAPPPPPS--------YSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPL 202
+A I +++ + +S A
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNS--------------------ALF 146
Query: 203 QAWSSRQAKTQPVVIM--QSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPV 260
+A A+ V I Q ++ L+ + T I+ +
Sbjct: 147 RAVGEGNAQL--VAIFGGQGNTDDYFEE--LRD-LYQTYHVLVGDLIKFSAETLSELIRT 201
Query: 261 PTTEPPSYASTMQA---------------LATSRVATISIPESNTTTTTTTPAHPLLQRK 305
+ + L + IS P AH ++ K
Sbjct: 202 TLDAEKVFTQGLNILEWLENPSNTPDKDYLLS---IPISCPLI----GVIQLAHYVVTAK 254
Query: 306 ---FSPGDSRSES---------------PASASSTES---------------------RT 326
F+PG+ RS A S ES
Sbjct: 255 LLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAY 314
Query: 327 PP--LPPTTSSSVNNKNMTNGTGGGRTYKINHQSPIPERKHM------TKEKEDERRECK 378
P LPP S+ ++ N G P P M T+E+ + K
Sbjct: 315 PNTSLPP----SILEDSLENNEG----------VPSP----MLSISNLTQEQVQDYVN-K 355
Query: 379 VKNYSPQAFKFFMEQHIE-NVIKSHKQRV----------FRRLQLETEMAKIGLSAEAQC 427
++ P + +E +++ K V L L A GL
Sbjct: 356 TNSHLPA------GKQVEISLVNGAKNLVVSGPPQSLYGL-NLTLRKAKAPSGLD----- 403
Query: 428 QMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVT 468
Q R S++ K F V
Sbjct: 404 QSRIPFSER--------------------KLKFSNRFLPVA 424
Score = 39.3 bits (91), Expect = 0.008
Identities = 75/421 (17%), Positives = 110/421 (26%), Gaps = 178/421 (42%)
Query: 19 KAERDILAEADNEWVVKLYYSF--QGDIFILVGLWVNTMEYALAARVLKSILGESTTEVD 76
K L A E +L F QG NT +Y +
Sbjct: 139 KKSNSALFRAVGEGNAQLVAIFGGQG----------NTDDY------FE----------- 171
Query: 77 NEIRLIDTNHLYAM-KTL------RKADVLKRNQVAHVKAER------DILA-------E 116
E+R LY L A+ L + AE+ +IL
Sbjct: 172 -ELR-----DLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNT 225
Query: 117 ADNEWVVKLYYSF------QDKDNL--YFV----MDYIPGEKLIPYPS----------PA 154
D ++++ + S Q L Y V + + PGE L Y A
Sbjct: 226 PDKDYLLSIPISCPLIGVIQ----LAHYVVTAKLLGFTPGE-LRSYLKGATGHSQGLVTA 280
Query: 155 AAPPPPPS----YSASIQ-----------SRQS-PTQSPSSGI--YSGPGSTGSPSP--- 193
A S + + + ++ P S I S + G PSP
Sbjct: 281 VAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS 340
Query: 194 -------------------IPPTR------------------PAPLQAWSS--RQAKTQP 214
+P + P L + R+AK
Sbjct: 341 ISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPS 400
Query: 215 VVIMQSVKSTPV--QKPSLQTAIAPTSPP---SY----SSSIQQQQQKPQ---PPS---- 258
+ QS P +K P + P S I + K
Sbjct: 401 GLD-QS--RIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI 457
Query: 259 PVPTTEPPSYASTMQALATSRVATI-----SIP---ESNTTTTTTTPAHPLLQRKFSPGD 310
PV T S ++ L+ S I +P E+ T T H L F PG
Sbjct: 458 PVYDTFD---GSDLRVLSGSISERIVDCIIRLPVKWETTTQFKAT---HILD---FGPGG 508
Query: 311 S 311
+
Sbjct: 509 A 509
Score = 31.9 bits (72), Expect = 1.2
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 37/140 (26%)
Query: 97 DVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDN---LYFVMDYIPGEKL-IPY 150
D+ K ++ A +D+ ADN + +S D +N L G+++ Y
Sbjct: 1634 DLYKTSKAA-----QDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENY 1688
Query: 151 PSPAAAPPPPPSYSASIQSR---QSPTQSPSSGIYSGP----GSTGSPSPIPPTRPAPLQ 203
+ +++ + + +S + +T T+PA L
Sbjct: 1689 SAMIFETIV----DGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQF------TQPA-LT 1737
Query: 204 AWSSRQAKTQPVVIMQSVKS 223
+ +KS
Sbjct: 1738 LME--------KAAFEDLKS 1749
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 40.0 bits (93), Expect = 0.003
Identities = 36/277 (12%), Positives = 78/277 (28%), Gaps = 47/277 (16%)
Query: 413 ETEMAKIGLSAEAQCQMRKMLSQKESNY-IRLKRAKMDKSMFIKIKPIGVGAFGEVTLVR 471
E +++ LSAE ++ ++ + ++ + KI I V V
Sbjct: 3 EGNSSELPLSAEDAKKLTELAENVLQGWDVQAE----------KIDVIQGNQMALVWKV- 51
Query: 472 KIDTNHLYAMKTIYKCVGAFG-EVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN 530
+ +K I++ + + + V + G +L K +
Sbjct: 52 -HTDSGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNKKG-----SLYSKHGSF 105
Query: 531 HLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMK 590
V I G R + ++ I K + F ++ + K
Sbjct: 106 LFVVYDWIE------G-----RPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTK 154
Query: 591 GSPHNNLYFVM-DYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM-------- 641
N Y + LM+ K+ F + + + + ++
Sbjct: 155 LGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPW 214
Query: 642 --------GFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
H+D N L+ + I + D +
Sbjct: 215 TEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251
>3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus
interaction, metal-binding, nucleus, receptor,
transcription, transcription regulation, zinc-FIN
activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB:
3dzu_A* 3e00_A*
Length = 467
Score = 38.9 bits (90), Expect = 0.007
Identities = 12/130 (9%), Positives = 35/130 (26%), Gaps = 4/130 (3%)
Query: 141 YIPGEKLIPYPSPAAAPPPP----PSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPP 196
++ + + ++ P + S+ P ++S + SP
Sbjct: 8 HVDDDDKMFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMG 67
Query: 197 TRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQP 256
+ + + + + P + Q S ++ + + + P
Sbjct: 68 PPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAH 127
Query: 257 PSPVPTTEPP 266
PS +
Sbjct: 128 PSGNMASFTK 137
Score = 36.6 bits (84), Expect = 0.038
Identities = 19/104 (18%), Positives = 27/104 (25%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
PS + P + S S SP +G+ SP
Sbjct: 36 PSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTG 95
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKP 254
Q M V S+ KP L P S ++ +
Sbjct: 96 SPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHI 139
Score = 36.2 bits (83), Expect = 0.054
Identities = 20/138 (14%), Positives = 36/138 (26%), Gaps = 3/138 (2%)
Query: 218 MQSVKSTPVQKPSL-QTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALA 276
+ + + +PT S ++ P SP P S S+
Sbjct: 7 HHVDDDDKMFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGM 66
Query: 277 TSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSS 336
+ IS P + + P P L S +SS + + P
Sbjct: 67 GPPFSVISSPMG--PHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKV 124
Query: 337 VNNKNMTNGTGGGRTYKI 354
+ + + I
Sbjct: 125 PAHPSGNMASFTKHICAI 142
Score = 30.1 bits (67), Expect = 4.4
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPI-PPTRPAPLQAWSS 207
SP PP S +S S + + + GS SP+ P + ++
Sbjct: 58 TLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSSSEDIKPPLG 117
Query: 208 RQAKTQPVVIMQSVKSTPVQKP 229
+ ++ +
Sbjct: 118 LNGVLKVPAHPSGNMASFTKHI 139
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase;
endopeptidase activity, protein kinase activity; HET:
TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A*
2vwb_A*
Length = 540
Score = 38.5 bits (90), Expect = 0.011
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+N +M YI G K + E+ L Y ++ V +HK IH D+ N +
Sbjct: 412 DNKRIMMSYINGKLA------KDVIEDNLDIAY--KIGEIVGKLHKNDVIHNDLTTSNFI 463
Query: 655 IDRDGHIKLTDFGL 668
D+D + + DFGL
Sbjct: 464 FDKD--LYIIDFGL 475
>3gdb_A Endo-D, putative uncharacterized protein SPR0440;
alpha-beta-barrels, cell WALL, peptidoglycan-anchor,
secreted, hydrolase; HET: PGE; 1.87A {Streptococcus
pneumoniae} PDB: 2xqx_A
Length = 937
Score = 38.4 bits (88), Expect = 0.013
Identities = 22/208 (10%), Positives = 53/208 (25%), Gaps = 20/208 (9%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
S + + + + + + T SP+ +A
Sbjct: 35 ELVSGESEHSTNEADKQNEGEHARENKLEKAEGVATASETASPASNEAATTETAEA---- 90
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSY 268
+ + P +K S A P S + S ++ + KP+ + ++P +
Sbjct: 91 -----------ASAAKPEEKASEVVAETP-SAEAKPKSDKETEAKPEATNQGDESKPAAE 138
Query: 269 ASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRK----FSPGDSRSESPASASSTES 324
A+ + V + LL+ + +R ++ T
Sbjct: 139 ANKTEKEVQPDVPKNTEKTLKPKEIKFNSWEELLKWEPGAREDDAINRGSVVLASRRTGH 198
Query: 325 RTPPLPPTTSSSVNNKNMTNGTGGGRTY 352
+ N + +
Sbjct: 199 LVNEKASKEAKVQALSNTNSKAKDHASV 226
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos
taurus} SCOP: i.9.1.1
Length = 390
Score = 37.9 bits (87), Expect = 0.014
Identities = 25/180 (13%), Positives = 44/180 (24%), Gaps = 13/180 (7%)
Query: 143 PGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPL 202
+P + P + A ++ +Q+ + G G S S P
Sbjct: 212 TITGPVPREFKSQLQEAPLEWKALLEMQQTKMVLETFG-GDGHARGDSVSQGTGLAPGSP 270
Query: 203 QAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSP--- 259
+ + S + A T P P P P
Sbjct: 271 RKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSA 330
Query: 260 ---VPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESP 316
P P A T + + ++ +++ P G+ R SP
Sbjct: 331 GTWNPGRPEPGSAGTWNPGRPEPGSAGTWNTGSSGSSSFRPDSS------GHGNIRPSSP 384
Score = 34.8 bits (79), Expect = 0.14
Identities = 22/192 (11%), Positives = 40/192 (20%), Gaps = 3/192 (1%)
Query: 146 KLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAW 205
+L + P Y ++ P S
Sbjct: 187 QLEQVIAINLLPSRDIQYLPILKMSTITGPVPRE-FKSQLQEAPLEWKALLEMQQTKMVL 245
Query: 206 SSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEP 265
+ S + + + + S P P P +
Sbjct: 246 ETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAG 305
Query: 266 PSYA-STMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTES 324
A + P S T P P ++PG S + ++ S
Sbjct: 306 TWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPE-PGSAGTWNPGRPEPGSAGTWNTGSS 364
Query: 325 RTPPLPPTTSSS 336
+ P +S
Sbjct: 365 GSSSFRPDSSGH 376
Score = 31.4 bits (70), Expect = 1.4
Identities = 18/113 (15%), Positives = 28/113 (24%), Gaps = 23/113 (20%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
P P +A P + + T +P G+ P P +
Sbjct: 299 PEPGSAGTWNPGRP---EPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTW--------- 346
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTT 263
P T S ++ P S + +P SP T
Sbjct: 347 --NPGRPEPGSAGTWNTGSSGSSSFRPDSSGHGN---------IRPSSPDWGT 388
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 37.3 bits (86), Expect = 0.016
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
H DI N+L+ + I + D+
Sbjct: 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEP 234
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane
protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP:
c.30.1.5 d.142.1.3 PDB: 1px2_A*
Length = 422
Score = 37.1 bits (85), Expect = 0.022
Identities = 20/120 (16%), Positives = 33/120 (27%), Gaps = 16/120 (13%)
Query: 129 FQDKDNLYFVMDYIPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGST 188
D + M +P + P PPPP + SP +P S S ++
Sbjct: 9 LSDSN----FMANLPNGYMTDLQRPQPPPPPPSA--------ASPGATPGSAAASAERAS 56
Query: 189 GSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQ 248
+ P P+P S + +VK T + +
Sbjct: 57 TAAPVASPAAPSP----GSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGA 112
Score = 35.6 bits (81), Expect = 0.075
Identities = 25/163 (15%), Positives = 40/163 (24%), Gaps = 20/163 (12%)
Query: 240 PPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAH 299
P Y + +Q+ Q P PPS P A S ++T +PA
Sbjct: 19 PNGYMTDLQRPQPPPPPPSAASPGATPG------------SAAASAERASTAAPVASPAA 66
Query: 300 PLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSSVNNKNMTNGTGGGRTYKINHQSP 359
P G S S A +T + +
Sbjct: 67 PSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARVLLVIDEPHTD 126
Query: 360 IPERKHMTKEKED--------ERRECKVKNYSPQAFKFFMEQH 394
+ K + E + + ++ F ME
Sbjct: 127 WAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVL 169
Score = 34.1 bits (77), Expect = 0.20
Identities = 20/91 (21%), Positives = 30/91 (32%)
Query: 139 MDYIPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTR 198
M + + P P AA+P P +A+ R S +S PGS+G
Sbjct: 23 MTDLQRPQPPPPPPSAASPGATPGSAAASAERASTAAPVASPAAPSPGSSGGGGFFSSLS 82
Query: 199 PAPLQAWSSRQAKTQPVVIMQSVKSTPVQKP 229
A Q ++ A V S +
Sbjct: 83 NAVKQTTAAAAATFSEQVGGGSGGAGRGGAA 113
Score = 32.5 bits (73), Expect = 0.67
Identities = 13/97 (13%), Positives = 33/97 (34%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P P P+AA P SA+ + ++ T +P + + + + ++ ++
Sbjct: 32 PPPPPSAASPGATPGSAAASAERASTAAPVASPAAPSPGSSGGGGFFSSLSNAVKQTTAA 91
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSS 245
A T + + + + P + +
Sbjct: 92 AAATFSEQVGGGSGGAGRGGAAARVLLVIDEPHTDWA 128
Score = 30.2 bits (67), Expect = 3.3
Identities = 16/95 (16%), Positives = 29/95 (30%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P + A P + SA S +P SP++ G G S + A ++
Sbjct: 36 PSAASPGATPGSAAASAERASTAAPVASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAAT 95
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSY 243
++ + + + L T Y
Sbjct: 96 FSEQVGGGSGGAGRGGAAARVLLVIDEPHTDWAKY 130
Score = 29.0 bits (64), Expect = 6.9
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 302 LQRKFSPGDSRSESPASASSTESRTPPLPPTTSS 335
L+R+ S + + P + R P PP S+
Sbjct: 5 LRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPSA 38
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici
SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens}
PDB: 3cw1_A
Length = 231
Score = 36.2 bits (83), Expect = 0.033
Identities = 16/125 (12%), Positives = 27/125 (21%), Gaps = 12/125 (9%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
P+ P P + ++ P+Q + G + + + AP Q R
Sbjct: 115 PAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGG 174
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYAS 270
P PP + P PP
Sbjct: 175 ------------PPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRP 222
Query: 271 TMQAL 275
+
Sbjct: 223 PPPGM 227
Score = 33.9 bits (77), Expect = 0.20
Identities = 22/142 (15%), Positives = 33/142 (23%), Gaps = 5/142 (3%)
Query: 156 APPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPV 215
PP I + GI G P PA L
Sbjct: 81 TVEGPPPKDTGIARVPLAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQ 140
Query: 216 VIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQAL 275
V+ + T + A T+ + + + + PP PP +
Sbjct: 141 VMTPQGRGTVAAAAA-----AATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGM 195
Query: 276 ATSRVATISIPESNTTTTTTTP 297
+ IP T P
Sbjct: 196 RPPMGPPMGIPPGRGTPMGMPP 217
Score = 30.8 bits (69), Expect = 1.6
Identities = 10/53 (18%), Positives = 13/53 (24%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
AA + S + Q P G G+ PP P
Sbjct: 145 QGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRP 197
Score = 30.0 bits (67), Expect = 2.9
Identities = 18/140 (12%), Positives = 27/140 (19%), Gaps = 6/140 (4%)
Query: 135 LYFVMDYIPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPI 194
+ ++ P + P A P R P P + G G +
Sbjct: 78 VSMTVEGPPPKDTGIARVPLAGAAGGPG-IGRAAGRGIPAGVPMPQ--APAGLAGPVRGV 134
Query: 195 PPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKP 254
+ S+ P Q P + P P
Sbjct: 135 GGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMG---P 191
Query: 255 QPPSPVPTTEPPSYASTMQA 274
P P P
Sbjct: 192 PPGMRPPMGPPMGIPPGRGT 211
Score = 28.8 bits (64), Expect = 7.5
Identities = 9/53 (16%), Positives = 14/53 (26%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
P P + + + P P G+P +PP P
Sbjct: 170 PGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRP 222
>2b5l_C Nonstructural protein V; DDB1, SV5-V, beta propeller, propeller
cluster, zinc finger, protein binding/viral protein
complex; 2.85A {Simian virus 5} PDB: 2hye_B*
Length = 222
Score = 36.1 bits (82), Expect = 0.035
Identities = 19/161 (11%), Positives = 28/161 (17%), Gaps = 2/161 (1%)
Query: 166 SIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTP 225
S+Q S PG TG + + K
Sbjct: 26 YFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAI 85
Query: 226 VQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISI 285
V P P Q S + + T I
Sbjct: 86 VPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFI 145
Query: 286 PESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRT 326
E T + P+ ++ S
Sbjct: 146 EEPRENPIAT--SSPIDFKRGRDTGGFHRREYSIGWVGDEV 184
Score = 33.4 bits (75), Expect = 0.25
Identities = 19/165 (11%), Positives = 43/165 (26%), Gaps = 7/165 (4%)
Query: 138 VMDYIPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSP---SPI 194
++Y +++ S PP + ++ Q ++ G P P
Sbjct: 23 TVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPK 82
Query: 195 PPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQK- 253
PA + + + + + + V S +T + + + ++
Sbjct: 83 IAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMT 142
Query: 254 ---PQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTT 295
+P T P + SI T
Sbjct: 143 RFIEEPRENPIATSSPIDFKRGRDTGGFHRREYSIGWVGDEVKVT 187
Score = 29.6 bits (65), Expect = 4.2
Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 10/146 (6%)
Query: 245 SSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQR 304
QQ S T PP + A +++ + + + P P
Sbjct: 25 EYFTSQQVTG-TSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKP---- 79
Query: 305 KFSPGDSRSESPASASSTESRTPPLPPT--TSSSVNNKNMTNGTGGGRTYKINHQSPIPE 362
P + + + PL T S+ +++ T +YK +
Sbjct: 80 --RPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAK-FG 136
Query: 363 RKHMTKEKEDERRECKVKNYSPQAFK 388
++++ +E RE + SP FK
Sbjct: 137 KENLMTRFIEEPRENPIATSSPIDFK 162
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA
GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo
sapiens} PDB: 3odx_A
Length = 536
Score = 35.8 bits (82), Expect = 0.062
Identities = 18/119 (15%), Positives = 29/119 (24%), Gaps = 2/119 (1%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P + R+ PS G+ G +P P L +
Sbjct: 44 QVPDFRHLKAEVDAEKPGATDRKGGVGMPSRD--RNIGAPGQDTPGVSLHPLSLDSPDRE 101
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPS 267
P+ + S P+ SL + S + +P E P
Sbjct: 102 PGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGLELEPEEPP 160
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A
{Barmah forest virus}
Length = 253
Score = 35.4 bits (81), Expect = 0.067
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 6/94 (6%)
Query: 173 PTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQ 232
PTQ+ + P P P P + Q + + ++ Q
Sbjct: 5 PTQTFYGRRWR-PAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKRAQ 63
Query: 233 TAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPP 266
T PP ++ QKP+ P+ ++P
Sbjct: 64 KKPKKTPPPK-----PKKTQKPKKPTQKKKSKPG 92
Score = 30.4 bits (68), Expect = 2.1
Identities = 10/79 (12%), Positives = 17/79 (21%), Gaps = 2/79 (2%)
Query: 136 YFVMDYIPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIP 195
++ + P P P PP Q + + P
Sbjct: 9 FYGRRWRPAPVQRYIPQPQPPAPPRRRRGP--SQLQQLVAALGALALQPKQKQKRAQKKP 66
Query: 196 PTRPAPLQAWSSRQAKTQP 214
P P + + K
Sbjct: 67 KKTPPPKPKKTQKPKKPTQ 85
Score = 30.0 bits (67), Expect = 3.5
Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 6/95 (6%)
Query: 139 MDYIP-----GEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSP 193
MD+IP G + P P P P P + S Q + + +
Sbjct: 1 MDFIPTQTFYGRRWRPAPVQRYIPQPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQK 60
Query: 194 IPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQK 228
+P + +P Q KS P ++
Sbjct: 61 RAQKKPKKTPP-PKPKKTQKPKKPTQKKKSKPGKR 94
Score = 28.8 bits (64), Expect = 7.0
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 196 PTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQ 255
PT+ + W + Q P ++ + + + ++Q +Q++ +
Sbjct: 5 PTQTFYGRRWRPAPVQRYIP---QPQPPAPPRRRRGPSQLQQLVAALGALALQPKQKQKR 61
Query: 256 PPSPVPTTEPPS 267
T PP
Sbjct: 62 AQKKPKKTPPPK 73
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for
structural genomics of infec diseases, csgid; HET: MSE
ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A*
4dca_A* 3hav_A* 3ham_A*
Length = 320
Score = 35.5 bits (81), Expect = 0.075
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
E + Y L+ AV + +H D +N++ + + DFG
Sbjct: 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFN 236
>1eys_C Photosynthetic reaction center; membrane protein complex, electron
transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A
{Thermochromatium tepidum} SCOP: a.138.1.2
Length = 382
Score = 35.2 bits (80), Expect = 0.081
Identities = 11/53 (20%), Positives = 18/53 (33%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
+PAAA P A + + + + P+P+ PAP
Sbjct: 325 SEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVEPAPVEEVAPAP 377
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase,
aminoglycoside, phosphorylation, transferase-antibiotic
complex; HET: TOY; 1.80A {Enterococcus casseliflavus}
PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A*
3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A*
4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Length = 304
Score = 35.2 bits (81), Expect = 0.088
Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID-RDGHIK-LTDFGLCT 670
+ + FY L + + IH D D+IL D I + DFG
Sbjct: 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAA 222
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane
fusion, viral P glycoprotein B, HSV-1, membrane; HET:
NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A*
3nwd_A*
Length = 703
Score = 35.3 bits (81), Expect = 0.091
Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 9/126 (7%)
Query: 236 APTSPPSYSSSIQQQQQKPQPPSPVP--TTEPPSYASTMQALATSRVATISIPESNTTTT 293
APTSP + + Q P +P P P+ + + T P + T
Sbjct: 4 APTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNATV 63
Query: 294 TTTPAHPLLQRKFSPGDSRSES----PASASSTESRTPPLPPTTSSSVNNKNMTNGTGGG 349
A + ++ + P +T + P + +N T G
Sbjct: 64 AAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQFEQ-PRRCPTRPEGQNYTEGI--A 120
Query: 350 RTYKIN 355
+K N
Sbjct: 121 VVFKEN 126
Score = 31.5 bits (71), Expect = 1.5
Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Query: 143 PGEKLIPYPSPAA-APPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
P P + A A P+ A +PT P P + P P
Sbjct: 5 PTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNATVA 64
Query: 202 LQAWSSRQA 210
+ R+
Sbjct: 65 AGHATLREH 73
Score = 29.5 bits (66), Expect = 6.2
Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 9/112 (8%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
P+ P + A+ +P TG P P +P
Sbjct: 5 PTSPGTPGVAAATQAANGGPATPAPPALGAA-----PTGDPKPKKNKKPKN-PTPPRPAG 58
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAP---TSPPSYSSSIQQQQQKPQPPSP 259
V + ++ + A PP+ ++ +Q +Q + P P
Sbjct: 59 DNATVAAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQFEQPRRCPTRP 110
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB:
1dx1_A 1qlx_A 1qlz_A
Length = 219
Score = 34.4 bits (78), Expect = 0.12
Identities = 16/131 (12%), Positives = 18/131 (13%), Gaps = 9/131 (6%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P P S S P G G G
Sbjct: 4 KRPKPGGGWNTGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWG 63
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSY 268
Q T S + K +
Sbjct: 64 Q---------PHGGGWGQPHGGGGWGQGGTHGQWNKPSKPKTNMKHVAGAAAAGAVVGGL 114
Query: 269 ASTMQALATSR 279
M A SR
Sbjct: 115 GGYMLGSAMSR 125
Score = 32.5 bits (73), Expect = 0.40
Identities = 12/59 (20%), Positives = 14/59 (23%)
Query: 143 PGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
G + SP PP Q P G + P G P P
Sbjct: 15 GGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQP 73
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring
E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A
{Saccharomyces cerevisiae}
Length = 371
Score = 34.9 bits (79), Expect = 0.12
Identities = 18/104 (17%), Positives = 29/104 (27%), Gaps = 6/104 (5%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
+P +A +QSP+ S ST S + P P + SS
Sbjct: 2 LTPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSF 61
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKP 254
+ K +P K +Q I + +
Sbjct: 62 AVPTI----HFKESPFYK--IQRLIPELVMNVEVTGGRGMCSAK 99
Score = 31.8 bits (71), Expect = 1.1
Identities = 10/52 (19%), Positives = 15/52 (28%)
Query: 148 IPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRP 199
+ P P + Q R++ T S +S S S P
Sbjct: 13 MEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSFAVP 64
Score = 31.4 bits (70), Expect = 1.5
Identities = 9/53 (16%), Positives = 16/53 (30%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
P PS +++ T + SS + P + S + P
Sbjct: 12 SMEGPPTVQQQSPSVIRQSPTQRRKTSTTSSTSRAPPPTNPDASSSSSSFAVP 64
Score = 29.1 bits (64), Expect = 7.6
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 236 APTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTT 295
+ T + + + Q SP + P+ +S + +++++
Sbjct: 1 SLTPLSAITVRSMEGPPTVQQQSPSVIRQSPTQRRKTST-TSSTSRAPPPTNPDASSSSS 59
Query: 296 TPAHPLLQRKFSP 308
+ A P + K SP
Sbjct: 60 SFAVPTIHFKESP 72
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase,
phosphorylation, transferase-antibiotic COMP; HET: ANP
B31; 2.10A {Enterococcus faecalis} PDB: 2b0q_A* 1l8t_A*
3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Length = 263
Score = 34.2 bits (78), Expect = 0.13
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRW 674
++ F H D+ NI + D G +W
Sbjct: 181 EELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKW 217
Score = 32.7 bits (74), Expect = 0.47
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADN 119
R +K G S +V +L+ N L+ D + V+ E+D++ +
Sbjct: 15 KYRCVKDTEGMSPAKV---YKLVGENENLY---LKMTDSRYKGTTYDVEREKDMMLWLEG 68
Query: 120 E-WVVKLYYSFQDKDNLYFVMDYIPGEKLIPYPSPAAAP 157
+ V K+ + + +M G +P
Sbjct: 69 KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSP 107
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 34.5 bits (79), Expect = 0.15
Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 3/87 (3%)
Query: 183 SGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPS 242
+ + IP + + + + +MQ ++ P A P P
Sbjct: 343 ETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAYPPQGYAPPPQGYPP 402
Query: 243 YSSSIQ---QQQQKPQPPSPVPTTEPP 266
Q Q PQ P P PP
Sbjct: 403 QGYPPQGYPPQGYPPQGYPPPPQGAPP 429
Score = 33.4 bits (76), Expect = 0.34
Identities = 21/123 (17%), Positives = 31/123 (25%), Gaps = 14/123 (11%)
Query: 146 KLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAW 205
+ P+ + + P S + P + + +Q
Sbjct: 328 QTFPWVLTCCQFDDKETEDDKDAETEIPAGESSD---AAPSADAAQMKEMMAMMQKMQQ- 383
Query: 206 SSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQ--PPSPVPTT 263
+QA P + P Q Q PP Q PQ PP P
Sbjct: 384 --QQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPP------QGYPPPPQGAPPQGAPPA 435
Query: 264 EPP 266
PP
Sbjct: 436 APP 438
Score = 29.5 bits (66), Expect = 6.0
Identities = 12/63 (19%), Positives = 14/63 (22%), Gaps = 1/63 (1%)
Query: 142 IPGEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAP 201
+ + PP A P Q Y G P PP P
Sbjct: 371 MKEMMAMMQKMQQQQAAYPPQGYAPPPQ-GYPPQGYPPQGYPPQGYPPQGYPPPPQGAPP 429
Query: 202 LQA 204
A
Sbjct: 430 QGA 432
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase,
kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP:
d.144.1.6
Length = 264
Score = 33.8 bits (77), Expect = 0.17
Identities = 8/52 (15%), Positives = 14/52 (26%)
Query: 619 FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
+ A L + + H D NI+++ D G
Sbjct: 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213
Score = 30.0 bits (67), Expect = 3.1
Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 8/66 (12%)
Query: 98 VLKRN---QVAHVKAERDILAEADNEW--VVKLYYSFQDKDNLYFVMDYIPGEKLIPYPS 152
+K + + ++ E L+ + + + ++ +PG+ S
Sbjct: 48 FVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ---DLLS 104
Query: 153 PAAAPP 158
AP
Sbjct: 105 SHLAPA 110
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex,
inter-protein beta sheet, protein-protein, metal
transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A
{Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Length = 229
Score = 33.5 bits (76), Expect = 0.20
Identities = 16/124 (12%), Positives = 32/124 (25%)
Query: 177 PSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIA 236
S + G + P P+ A +P +Q V+ I
Sbjct: 10 SSGLVPRGSHMSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIP 69
Query: 237 PTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTT 296
+ + + + P PV + + + + T++T T
Sbjct: 70 EPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTAT 129
Query: 297 PAHP 300
A
Sbjct: 130 AATS 133
Score = 28.5 bits (63), Expect = 8.2
Identities = 22/113 (19%), Positives = 35/113 (30%), Gaps = 2/113 (1%)
Query: 224 TPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATI 283
P Q S+ P + + P P P EPP A + +
Sbjct: 30 APAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK 89
Query: 284 SIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSS 336
P P+ R SP + + +PA +S+ + P TS +
Sbjct: 90 PKPVKKVQEQPKRDVKPVESRPASPFE--NTAPARLTSSTATAATSKPVTSVA 140
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer,
antibiotic resistance, transfer; HET: GDP; 1.70A
{Enterococcus gallinarum} PDB: 3tdv_A*
Length = 306
Score = 33.9 bits (77), Expect = 0.20
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIK-LTDFGLCT 670
+ L + + +T V + + IH D+ PD+ L + R + + DFG
Sbjct: 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation,
ribosome inhibitor, hydrolase; HET: CIT; 2.30A
{Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1
PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Length = 551
Score = 34.2 bits (77), Expect = 0.21
Identities = 31/176 (17%), Positives = 54/176 (30%), Gaps = 12/176 (6%)
Query: 153 PAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKT 212
PA + P + SI + S+ I + P A S+ AK
Sbjct: 93 PALSTPGAGGLAVSI-----SAGALSAAIADIMAALKGPFKFGLWGVALYGVLPSQIAKD 147
Query: 213 QPVVIMQSVKSTPVQK-PSLQTAIAPTSPPSY------SSSIQQQQQKPQPPSPVPTTEP 265
P ++ + V S P + P + ++ ++Q S VP + P
Sbjct: 148 DPNMMSKIVTSLPADDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSGVPMSCP 207
Query: 266 PSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASS 321
A + + P N + +TPA L + + PA +
Sbjct: 208 VVDAKPTERPGVFTASIPGAPVLNISVNNSTPAVQTLSPGVTNNTDKDVRPAGFTQ 263
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural
genomics, PSI, protein structure initiative; 2.80A
{Escherichia coli} SCOP: d.144.1.6
Length = 328
Score = 33.5 bits (76), Expect = 0.26
Identities = 13/64 (20%), Positives = 17/64 (26%), Gaps = 3/64 (4%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
IA +T + +H D NIL D + NGD
Sbjct: 182 IAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMF--VDLDDA-RNGPAVQDLWMLLNGDK 238
Query: 688 GRQD 691
Q
Sbjct: 239 AEQR 242
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.2 bits (72), Expect = 0.35
Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 12/35 (34%)
Query: 219 QSVKSTPVQKPSLQTAI---APTSPPSYS--SSIQ 248
Q++K K LQ ++ A S P+ + ++++
Sbjct: 20 QALK-----K--LQASLKLYADDSAPALAIKATME 47
Score = 29.5 bits (65), Expect = 2.5
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Query: 369 EKEDERR-ECKVKNYSPQ-----AFKFFME 392
EK+ ++ + +K Y+ A K ME
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATME 47
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta
isoform; transferase, phosphoprotein, isoform-specific
inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A*
2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A*
2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Length = 940
Score = 33.3 bits (75), Expect = 0.46
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
L+CA V D DNI+I G + DFG G
Sbjct: 773 LSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHFLG 813
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase,
membrane traffic, coiled coil, exocytosis,
phosphoprotein; HET: GNP; 2.60A {Saccharomyces
cerevisiae}
Length = 320
Score = 33.0 bits (74), Expect = 0.46
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
Y P +SPT + ++ GS +P TR + ++
Sbjct: 242 SYQRAVITNRPGSV-----SPIKSPTSNFTTNTTQSVGSVPFSAPTERTRRSETES---- 292
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTS 239
PV SV+ K + + S
Sbjct: 293 ---VNPVSTPASVEYHAGMKSLNKAPYSSNS 320
>1rm1_C Transcription initiation factor IIA large chain; yeast TFIIA, TBP
protein, ATA-box DNA, transcription/DNA complex; 2.50A
{Saccharomyces cerevisiae}
Length = 286
Score = 32.6 bits (72), Expect = 0.47
Identities = 19/182 (10%), Positives = 47/182 (25%), Gaps = 7/182 (3%)
Query: 145 EKLIPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQA 204
+KL + + + + Q+ + + PG S I
Sbjct: 44 KKLTETKVTTFSWDNQFN-----EGNINGVQNDLNFNLATPGVNSSEFNIKEENTGNEGL 98
Query: 205 WSSR--QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPT 262
P ++ + V+ + A T+ +++ Q K + +
Sbjct: 99 ILPNINSNNNIPHSGETNINTNTVEATNNSGATLNTNTSGNTNADVTSQPKIEVKPEIEL 158
Query: 263 TEPPSYASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASST 322
T + +T++ + + T + Q K + +
Sbjct: 159 TINNANITTVENIDDESEKKDDEEKEEDVEKTRKEKEQIEQVKLQAKKEKRSALLDTDEV 218
Query: 323 ES 324
S
Sbjct: 219 GS 220
>2cp6_A Restin; microtubule binding, cytoskeleton associated protein,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.34.10.1
Length = 172
Score = 32.0 bits (72), Expect = 0.52
Identities = 12/57 (21%), Positives = 17/57 (29%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSS 207
+ A + S +SPS+ S S S P+R L S
Sbjct: 112 STTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTETSG 168
Score = 28.1 bits (62), Expect = 9.3
Identities = 13/65 (20%), Positives = 21/65 (32%)
Query: 178 SSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAP 237
+ + + + A A R + M SV S+ +PS +
Sbjct: 106 TKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSRPSRTGLLTE 165
Query: 238 TSPPS 242
TS PS
Sbjct: 166 TSGPS 170
>4fev_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine,
PP1, protein kinase inhibitor; HET: KAN PP1; 1.89A
{Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A*
4ej7_A* 3r78_A*
Length = 272
Score = 32.3 bits (73), Expect = 0.55
Identities = 9/52 (17%), Positives = 13/52 (25%)
Query: 619 FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
E+ + H D DN++ D I D G
Sbjct: 171 RNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP,
manganese, transferase; HET: ADP; 1.89A {Archaeoglobus
fulgidus} PDB: 1zp9_A* 1ztf_A*
Length = 258
Score = 32.3 bits (73), Expect = 0.58
Identities = 14/100 (14%), Positives = 34/100 (34%), Gaps = 5/100 (5%)
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFE--EPLARFYI 628
E + + + V + + +M++I +L + + + E E
Sbjct: 117 TEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIF 176
Query: 629 AELTCAVE-SVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 667
++ V+ + +H D+ NI+ + D G
Sbjct: 177 NDVVENVKRLYQEAELVHADLSEYNIMY--IDKVYFIDMG 214
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn
complex, rRNA processing, transferase; HET: ADP; 1.75A
{Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB:
1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Length = 282
Score = 32.2 bits (73), Expect = 0.68
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 600 VMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+M+ I +L + + + V + G +H D+ N+L+ +
Sbjct: 178 LMELIDAKELYRV-------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE- 229
Query: 660 HIKLTDFG 667
I + DF
Sbjct: 230 GIWIIDFP 237
>3tx7_B Nuclear receptor subfamily 5 group A member 2; LRH-1, beta-catenin,
armadillo repeat, nuclear receptor LIGA binding domain,
protein binding; HET: P6L; 2.76A {Homo sapiens}
Length = 352
Score = 32.3 bits (73), Expect = 0.71
Identities = 24/127 (18%), Positives = 36/127 (28%), Gaps = 1/127 (0%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
+ AA PP S + S S T P + G + G P SS ++
Sbjct: 36 LNHAALPPTDYDRSPFVTSPISMTMPPHGSL-QGYQTYGHFPSRAIKSEYPDPYTSSPES 94
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYAS 270
+ S+P P L + P + Q + E S
Sbjct: 95 IMGYSYMDSYQTSSPASIPHLILELLKCEPDEPQVQAKIMAYLQQEQANRSKHEKLSTFG 154
Query: 271 TMQALAT 277
M +A
Sbjct: 155 LMCKMAD 161
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta
protein, PIK3C3, compound 15E, structural genomics, SGC
stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Length = 614
Score = 32.5 bits (73), Expect = 0.81
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 617 GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
GI E + + +CA V D DN+L+ + G + DFG G
Sbjct: 451 GISAEVMDTYV---KSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILG 502
>2i0q_B Telomere-binding protein beta subunit; single strand DNA-protein
complex, structural protein/DNA complex; 1.91A
{Sterkiella nova} SCOP: b.40.4.3
Length = 385
Score = 31.9 bits (71), Expect = 0.91
Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 18/163 (11%)
Query: 168 QSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSV----KS 223
+ + + + G + S+++ + + +SV K
Sbjct: 234 HTDGAKVKGGAKGKGKAAAKAAKGKKL-----------SAKKGDSSAADVRKSVDKIVKY 282
Query: 224 TPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATI 283
TP + T +P + SS ++ +K P +P P+ + + + +A +
Sbjct: 283 TPSKGSRKDTPQKSQAPAAGKSSAKKGGKKAVPSAPSPSGKKSALTTDKMTMAQFV-KYL 341
Query: 284 SIPESNTTTTTTTPAHPLLQRKFSPGDSRSESPASASSTESRT 326
E ++ L +R S G + + S ++ +++
Sbjct: 342 DWHEKKKGGKVSSGGKVLGKR--SAGKASATSGKASKASKKTA 382
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller,
structural genomics, PSI-2, Pro structure initiative;
1.90A {Bacteroides uniformis}
Length = 328
Score = 31.5 bits (71), Expect = 1.2
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 9/120 (7%)
Query: 485 YKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGV 544
Y V + + KIDT V+ + +G +LV + Y+
Sbjct: 142 YVYVNCWSYQNRILKIDTETDKVVDELT--IGIQPT-SLVMDKYNKMWTITDGGYEGSPY 198
Query: 545 FGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYI 604
E + +ID V K +G + + + LY + NN + M
Sbjct: 199 GYEAPSLYRIDAETFTVEKQFKFKLGDWP-SEVQLNGTRDTLYWI-----NNDIWRMPVE 252
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta
isoform; transferase, phosphoinositide 3-kinase, RTK;
HET: GD9; 3.30A {Mus musculus}
Length = 1092
Score = 31.8 bits (71), Expect = 1.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
+CA V D DNI++ + G + DFG G
Sbjct: 926 SCAGYCVASYVLGIGDRHSDNIMVKKTGQLFHIDFGHILG 965
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase,
tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR
PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A*
2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A*
2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A*
2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Length = 361
Score = 31.4 bits (70), Expect = 1.3
Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 9/110 (8%)
Query: 497 VRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDT 556
V D + + + G V + D +Y M T ++ + +V D
Sbjct: 33 VHVYDYTNGKFLGMVP--TAFNGHVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDA 88
Query: 557 NHLYVMKTIYKCVGAFGEVTLVRKI----DTNHLYVMKGSPHNNLYFVMD 602
+ L K I + D + + SP ++ ++D
Sbjct: 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIG-IVD 137
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide
3-kinase gamma, secondary messenger generation, PI3K, PI
3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP:
a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A*
1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A*
3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A*
3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Length = 961
Score = 31.8 bits (71), Expect = 1.3
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
+CA V D DNI+I G++ DFG G
Sbjct: 790 SCAGYCVATFVLGIGDRHNDNIMISETGNLFHIDFGHILG 829
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase;
2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A*
2x6j_A* 2x6k_A*
Length = 696
Score = 31.4 bits (70), Expect = 1.5
Identities = 38/291 (13%), Positives = 87/291 (29%), Gaps = 30/291 (10%)
Query: 391 MEQHIENVIKSHKQRVFRRLQLETEMAKIGLSAEAQCQMRKMLSQKESNYIRLKRAKMDK 450
+E+ + + + L+ + + + L ++ L +
Sbjct: 306 VEEVESVRKQDERAHDMYAMVLKMFLKVLENGNFNLRGIFYNLRKQRRFIDELVKLVKLV 365
Query: 451 SMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRKIDTNHLYVMKT 510
+ + F ++ + + + + I + +T KI + K+
Sbjct: 366 AKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFEPIPFPLDPEIYIT---KIVPMRTSLFKS 422
Query: 511 -------IYKCVGAFGEVTLVRKIDTN---HLYVMKTIYKCVGVFGEVTLVRKIDTNHLY 560
+ A E + K + +++ I + L K+
Sbjct: 423 ALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKL------ 476
Query: 561 VMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFE 620
T YK + + ++ +D+ + + N F + P + GI
Sbjct: 477 ---TPYKVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDN-----GPYGISA 528
Query: 621 EPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
E + + +CA V D DN+L+ +G + DFG G
Sbjct: 529 EVMDTYI---KSCAGYCVITYLLGVGDRHLDNLLLTTNGKLFHIDFGYILG 576
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae}
SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB:
1pd0_A 1pd1_A
Length = 810
Score = 31.5 bits (70), Expect = 1.6
Identities = 16/86 (18%), Positives = 25/86 (29%), Gaps = 4/86 (4%)
Query: 156 APPPPPSYSASIQSRQSPTQSPSSGIYSG---PGSTGSPSPIPPTRPAPLQAWSSR-QAK 211
A P SA++ P P T P PP P + +
Sbjct: 1 AAPAYGQPSAAMGQNMRPMNQLYPIDLLTELPPPITDLTLPPPPLVIPPERMLVPSELSN 60
Query: 212 TQPVVIMQSVKSTPVQKPSLQTAIAP 237
P I ++ + P L+ + P
Sbjct: 61 ASPDYIRSTLNAVPKNSSLLKKSKLP 86
Score = 29.2 bits (64), Expect = 8.2
Identities = 18/99 (18%), Positives = 26/99 (26%), Gaps = 15/99 (15%)
Query: 239 SPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQALATSRVATISIPESNTTTTTTTPA 298
+ P+Y Q +P M L + T P T P
Sbjct: 1 AAPAYGQPSAAMGQNMRP---------------MNQLYPIDLLTELPPPITDLTLPPPPL 45
Query: 299 HPLLQRKFSPGDSRSESPASASSTESRTPPLPPTTSSSV 337
+R P + + SP ST + P S
Sbjct: 46 VIPPERMLVPSELSNASPDYIRSTLNAVPKNSSLLKKSK 84
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase,
wild type, viral protein; 2.38A {Sindbis virus} SCOP:
b.47.1.3 PDB: 1ld4_A 3j0f_A
Length = 264
Score = 30.9 bits (69), Expect = 1.7
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 1/90 (1%)
Query: 178 SSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAP 237
+ G ++ G P+P RP + + A+ +Q + + V + A P
Sbjct: 2 NRGFFNMLGRRPFPAPTAMWRPRRRRQAAPMPARNGLASQIQQLTTA-VSALVIGQATRP 60
Query: 238 TSPPSYSSSIQQQQQKPQPPSPVPTTEPPS 267
+P Q++Q QPP P
Sbjct: 61 QNPRPRPPPRQKKQAPKQPPKPKKPKPQEK 90
Score = 28.6 bits (63), Expect = 7.8
Identities = 16/113 (14%), Positives = 31/113 (27%), Gaps = 8/113 (7%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSR 208
P+P+P A P A+ ++ S + + + P P P +
Sbjct: 13 PFPAPTAMWRPRRRRQAAPMPARNGLASQIQQLTTAVSALVIGQATRPQNPRPRPPPRQK 72
Query: 209 QAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVP 261
+ + P + + A T P Q+ K +
Sbjct: 73 KQAPKQ----PPKPKKPKPQEKKKKQPAKTKPGKR----QRMALKLEADRLFD 117
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex,
transferase; HET: CPS ADP; 2.00A {Bacillus subtilis}
SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A*
2pup_A*
Length = 397
Score = 31.1 bits (69), Expect = 1.8
Identities = 6/28 (21%), Positives = 9/28 (32%), Gaps = 1/28 (3%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCT 670
IH D+ +I K+ D
Sbjct: 229 LIHGDLHTGSIFASEHE-TKVIDPEFAF 255
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator,
protein binding; NMR {Homo sapiens}
Length = 411
Score = 30.9 bits (68), Expect = 1.9
Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 1/109 (0%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
+PA + P S ++ + S + ++ + P I T P +Q
Sbjct: 231 ATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQV 290
Query: 211 KTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSP 259
V+ + + + +Q + P P S + + SP
Sbjct: 291 DLASVLTPEIMAP-ILANADVQERLLPYLPSGESLPQTADEIQNTLTSP 338
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets,
alpha helices, AMY amyloidosis, blood coagulation,
disease mutation, glycoprot phosphoprotein; HET: NAG NDG
BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A*
2a45_G*
Length = 562
Score = 31.0 bits (69), Expect = 2.0
Identities = 22/207 (10%), Positives = 50/207 (24%), Gaps = 8/207 (3%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQA 210
+P P + + + S + + + S GSTG + + +
Sbjct: 327 NQNPGSPRPGSTGTWNPGSSERGSAGHWTSESSVSGSTGQWHSESGSFRPDSPGSGNARP 386
Query: 211 KTQPVVIMQSVKST--PVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSY 268
+ V P + T TS +++ + + +
Sbjct: 387 NNPDWGTFEEVSGNVSPGTRREYHTEKLVTSKGDKELRTGKEKVTSGSTTTTRRSCSKTV 446
Query: 269 ASTMQALATSRVATISIPESNTTTTTTTPAHPLLQRKFSPGDSRSE------SPASASST 322
T+ + T + S + D + +ST
Sbjct: 447 TKTVIGPDGHKEVTKEVVTSEDGSDCPEAMDLGTLSGIGTLDGFRHRHPDEAAFFDTAST 506
Query: 323 ESRTPPLPPTTSSSVNNKNMTNGTGGG 349
P ++ + G+ G
Sbjct: 507 GKTFPGFFSPMLGEFVSETESRGSESG 533
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone,
triacylglycerol hydrolase, all alpha helix protein, A/B
hydrolase fold; 1.85A {Burkholderia glumae} SCOP:
a.137.15.1
Length = 332
Score = 30.9 bits (69), Expect = 2.0
Identities = 10/53 (18%), Positives = 16/53 (30%)
Query: 151 PSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQ 203
PAA P P A + P + + + P P + + L
Sbjct: 20 HMPAAPSPAPAGAVAGGPAAGVPAAASGAAEAAMPLPAALPGALAGSHAPRLP 72
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics,
joint center for structural genomics, JCSG, protein
structure initiative; 1.85A {Thermobifida fusca} PDB:
3f7w_A
Length = 288
Score = 30.4 bits (68), Expect = 2.7
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 15/67 (22%)
Query: 643 FIHRDIKPDNILIDRDGHI----------KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
IH D+ N+L DG + + D + F + + +
Sbjct: 190 RIHGDLWNGNVLWQDDGAVVIDPAAHGGHREADLAMLALFGLPYLDRVRD-----AYNEV 244
Query: 693 MEPSEEW 699
+E W
Sbjct: 245 APLAEGW 251
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins,
electron transfer complex, TTQ, electron transport,
oxidoreductase, periplasm, transport, metal- binding;
HET: TRQ; 2.50A {Paracoccus versutus}
Length = 426
Score = 30.4 bits (67), Expect = 2.8
Identities = 18/119 (15%), Positives = 33/119 (27%), Gaps = 11/119 (9%)
Query: 488 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGE 547
F +T ID + ++ G D + T+++ G+
Sbjct: 92 PAHFAAITQQFVIDGSTGRILGMTD--GGFLPHPVAAE--DGSFFAQASTVFE-RIARGK 146
Query: 548 VT-LVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKI-----DTNHLYVMKGSPHNNLYFV 600
T V D + I V + + D +L + SP + V
Sbjct: 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVV 205
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit
alpha isoform; PI3KCA, PI3K, PIK3R1,
phosphatidilynositol 3,4,5- triphosphate, wortmannin,
H1047R, ATP-binding, disease mutation, kinase; HET: KWT;
2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Length = 1091
Score = 30.6 bits (68), Expect = 3.0
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
+CA V D NI++ DG + DFG
Sbjct: 923 SCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLD 962
>3h2d_A CHEC-like superfamily protein; structural genomics, joint center
for structural genomics, J protein structure
initiative, PSI-2; HET: MSE; 1.86A {Shewanella
oneidensis} PDB: 3iic_A*
Length = 155
Score = 29.5 bits (66), Expect = 3.1
Identities = 13/81 (16%), Positives = 34/81 (41%), Gaps = 17/81 (20%)
Query: 8 DVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGL---WVN-----TMEYAL 59
+V+ +A ++ + +GD+ L+G+ T E L
Sbjct: 16 NVIS--TMASLELTPGKPQIKTDN-------LAKGDVSGLIGMVGPQTKGSLSITFEQKL 66
Query: 60 AARVLKSILGESTTEVDNEIR 80
++++++LGE+ +++ E+
Sbjct: 67 VLQIMQNMLGENPGKINEEVT 87
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA
complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Length = 171
Score = 29.5 bits (65), Expect = 3.3
Identities = 7/58 (12%), Positives = 15/58 (25%)
Query: 158 PPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPV 215
P PSY + + + + +P A + + P+
Sbjct: 8 PMVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPI 65
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,,
oxidoreductase; HET: NAG MAN A2G HEM; 1.70A
{Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB:
1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A*
Length = 343
Score = 30.3 bits (68), Expect = 3.4
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 146 KLIPYPSPAAAPPPPPSYSASIQSR---QSPTQSPSSGIYSGPGSTGSPSPIPPTR 198
+IP P P + Q+ ++P + + PG S + IPP +
Sbjct: 287 DVIPLSKPIPGNGPFSFFPPGKSHSDIEQACAETPFPSLVTLPGPATSVARIPPHK 342
>2p7n_A Pathogenicity island 1 effector protein; CVR69, structural
genomics, PSI-2, protein structure initiative; 2.80A
{Chromobacterium violaceum}
Length = 407
Score = 30.1 bits (66), Expect = 3.6
Identities = 19/176 (10%), Positives = 57/176 (32%), Gaps = 14/176 (7%)
Query: 160 PPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRPAPLQAWSSRQAKTQPVVIMQ 219
P + +++++ + QS + +G P A ++R + +
Sbjct: 11 PLTRPQALETQAAAPQSDAPDASAGQTRA------APQGSAAPALAAARAKADELGQAAR 64
Query: 220 SVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQ-------PPSPVPTTEPPSYASTM 272
V+++ ++ + +T +A + S + Q + + T + +
Sbjct: 65 EVRASVERQTAYETRLAAQRSAAAFSGGEPPQARREAPGAELDEARNAQTVSARLFEGNL 124
Query: 273 QALATSRVATISIPESNTTTTTTTPAHPL-LQRKFSPGDSRSESPASASSTESRTP 327
+ +A S A + + + Q + + + A+A + +
Sbjct: 125 KGVAQSGHAMSAEQKQALQSGLDDVFADAPPQARSAGAPMLYSANAAAGQGMADSD 180
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain,
signaling protein; 1.80A {Rattus norvegicus} SCOP:
b.55.1.4
Length = 168
Score = 29.1 bits (64), Expect = 3.8
Identities = 9/52 (17%), Positives = 14/52 (26%), Gaps = 3/52 (5%)
Query: 148 IPYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPPTRP 199
PS ++ QSP S +G +P + P
Sbjct: 119 KEKSQEKMELTSTPSQESAGGDLQSPLTPESI---NGTDDERTPDVTQNSEP 167
Score = 28.7 bits (63), Expect = 6.0
Identities = 13/66 (19%), Positives = 21/66 (31%)
Query: 206 SSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEP 265
S + ++ + K Q + TS PS S+ Q P S T +
Sbjct: 97 SEHHLSKFAEKFQEFKEAARLAKEKSQEKMELTSTPSQESAGGDLQSPLTPESINGTDDE 156
Query: 266 PSYAST 271
+ T
Sbjct: 157 RTPDVT 162
>3hm6_X Plexin-B1; structural genomics consortium, SGC, membrane,
transmembrane receptor, cell membrane, glycoprotein,
phosphoprotein; 2.40A {Homo sapiens} PDB: 3sua_D*
3su8_X*
Length = 644
Score = 30.1 bits (67), Expect = 3.9
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 852 RIQNSMDTSNFDPVDPDKLRNSDSMLD--ELSDELKS---PFHGFFEFTFRRFFDDGGGV 906
++Q ++ D K +D M + +L+ +L PF + + R FF
Sbjct: 33 KVQIQLENLESSVRDRCKKEFTDLMTEMTDLTSDLLGSGIPFLDYKVYAERIFFPGHRES 92
Query: 907 PYPNKISLDDNETQ 920
P + + ++
Sbjct: 93 PLHRDLGVPESRRP 106
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein,
hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Length = 138
Score = 28.8 bits (64), Expect = 4.1
Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Query: 144 GEKLI----PYPSPAAAPPPPPSY-SASIQSRQSPTQSPS 178
G+KL + + PPP S S+ + P SPS
Sbjct: 99 GQKLSINVVAANATVSMPPPSSSPPSSVMPPPVMPPPSPS 138
>2mad_H Methylamine dehydrogenase (heavy subunit);
oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A
{Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H*
1maf_H*
Length = 373
Score = 29.9 bits (66), Expect = 4.5
Identities = 8/115 (6%), Positives = 24/115 (20%), Gaps = 9/115 (7%)
Query: 488 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGE 547
+ +D ++ + G + + T + +
Sbjct: 40 PAHHSAIIQQWVLDAGSGSILGHVN--GGFLPNPVAAH--SGSEFALASTSFSRIAKGKR 95
Query: 548 VTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKI-----DTNHLYVMKGSPHNNL 597
V D + I +V + + L + + +
Sbjct: 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV 150
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone
cofactor, oxidoreductase-electron transport complex;
HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB:
2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D*
3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D*
3svw_D* 3pxw_D* 3sle_D* 1mg2_A* 1mg3_A* 2mta_H* ...
Length = 386
Score = 29.9 bits (66), Expect = 4.7
Identities = 20/118 (16%), Positives = 30/118 (25%), Gaps = 9/118 (7%)
Query: 488 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGE 547
F VT ID V+ I G + D + + T++ +
Sbjct: 52 PAHFAAVTQQFVIDGEAGRVIGMID--GGFLPNPVVAD--DGSFIAHASTVFSRIARGER 107
Query: 548 VTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKI-----DTNHLYVMKGSPHNNLYFV 600
V D L I V + D L + SP + V
Sbjct: 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 165
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB:
3hbn_A*
Length = 282
Score = 29.7 bits (65), Expect = 4.8
Identities = 30/249 (12%), Positives = 62/249 (24%), Gaps = 20/249 (8%)
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKG 617
H+ + K + +V+ L P L Y + +
Sbjct: 17 HIKRDLVLAK---QYSDVSFACLPLEGSLIDEIPYPVYELSSESIYELINLIKEEKFELL 73
Query: 618 IFEEPLARFYIAELTCAVESVHKMGFIHRDIK-PDNILIDRDGHIKLTDFG--------L 668
I + +L V + F +IL++ + + K +D+ +
Sbjct: 74 IIDHYGISVDDEKLIKLETGVKILSFDDEIKPHHCDILLNVNAYAKASDYEGLVPFKCEV 133
Query: 669 CTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLERRR-----R 723
GF + + + R+ + I S L +
Sbjct: 134 RCGFSYALIREEFYQEAKENRKKKYDFFICMGGTDIKNLSLQIASELPKTKIISIATSSS 193
Query: 724 REHQRCLAHSLVGTPNYIA-PEVLLRTGYTQLCDWW--SVGVILYEMLVGSPPFLANTSA 780
+ + L N + + S ++ E L+ F A
Sbjct: 194 NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISASSLVNEALLLKANFKAICYV 253
Query: 781 ETQYKVINW 789
+ Q W
Sbjct: 254 KNQESTATW 262
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr
kinase, pseudokinase, FHA domain, REG phosphorylation;
HET: TPO; 2.71A {Mycobacterium tuberculosis}
Length = 157
Score = 28.7 bits (64), Expect = 5.0
Identities = 12/48 (25%), Positives = 13/48 (27%)
Query: 149 PYPSPAAAPPPPPSYSASIQSRQSPTQSPSSGIYSGPGSTGSPSPIPP 196
P P QS P+ G YSG G G S
Sbjct: 20 HMPQGGGYAEPAGRDYDYGQSGAPDYGQPAPGGYSGYGQGGYGSAGTS 67
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.0 bits (64), Expect = 5.4
Identities = 10/82 (12%), Positives = 27/82 (32%), Gaps = 22/82 (26%)
Query: 362 ERKHMTKEK--EDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKI 419
E++ +E + E + + + + + + ++ E V K+ R
Sbjct: 93 EQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINN--RI---------- 140
Query: 420 GLSAEAQCQMRKMLSQKESNYI 441
A+ Q +++ I
Sbjct: 141 ---ADKA-----FYQQPDADII 154
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant
methionine recycling, refol transferase; HET: SR1 ADP;
1.90A {Arabidopsis thaliana}
Length = 420
Score = 29.2 bits (64), Expect = 7.1
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT 670
IH D+ ++++ +D ++ D
Sbjct: 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSF 260
>3gmj_D Protein mothers against DPP; MH2,SMAD,MAD, cytoplasm, developmental
protein, nucleus, phosphoprotein, transcription; 2.80A
{Drosophila melanogaster}
Length = 245
Score = 28.9 bits (64), Expect = 7.6
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 232 QTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTTEPPSYASTMQ 273
++A T PP+YS S P + + A
Sbjct: 4 MDSLAGTPPPAYSPSEDGNSNNPNDGGQLLDAQMGDVAQVSY 45
>3hrq_A PKS, aflatoxin biosynthesis polyketide synthase; hot-DOG fold,
iterative type I PKS, norsolorinic acid, product
template domain; HET: PLM; 1.80A {Aspergillus
parasiticus} PDB: 3hrr_A*
Length = 357
Score = 28.9 bits (64), Expect = 8.4
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 213 QPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPTT 263
Q V + + V + +L+ + T + +Q K P P PTT
Sbjct: 309 QIVAFFRGLTLRSVPRGALRVVLQTTVKKA----DRQLGFKTMPSPPPPTT 355
>3lso_A Putative membrane anchored protein; MCSG, PSI-2, structural genomic
protein structure initiative; HET: MLZ; 2.75A
{Corynebacterium diphtheriae} PDB: 3lso_B*
Length = 489
Score = 29.0 bits (63), Expect = 9.0
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 3/146 (2%)
Query: 144 GEKLIPYPSPAAAPPPPPSYSASIQSRQSPTQ-SPSSGIYSGPGSTGSPSPIPPTRPAPL 202
GE +IP + P + S + S T + + G + S S +P P +
Sbjct: 278 GETIIPVVTELDTKKPEDTDSYTGLINGSATSLLKPAKVMPGEKVSVSASLLPNKAPIRV 337
Query: 203 QAWSSRQAKTQPVVIMQSVKSTPVQKPSLQTAIAPTSPPSYSSSIQQQQQKPQPPSPVPT 262
+ + + + + + + Y + + +KP
Sbjct: 338 YEIGINAPEDVKYIDGTGKTNYSSKLATTGSVFSSPGSGYYDPEWKNESKKPNESYRGFH 397
Query: 263 TEPPSYASTMQALATSRVATISIPES 288
++ + S + + A IP++
Sbjct: 398 SD--TSYSVVDTSPQTVSAEFEIPKT 421
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP
hydrolysis, GDP, GMP, dynamin related, large GTPase
family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens}
SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A*
2bc9_A* 2d4h_A*
Length = 592
Score = 28.8 bits (63), Expect = 9.1
Identities = 16/87 (18%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 362 ERKHMTKEKEDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKIGL 421
+ + M ++KE +E +K + + ME ++K ++ + +LQ + ++ K G
Sbjct: 512 KNEQMMEQKERSYQE-HLKQLTEK-----MENDRVQLLKEQERTLALKLQEQEQLLKEGF 565
Query: 422 SAEAQCQMRKMLSQKESNYIRLKRAKM 448
E++ M+ + ++ R K +
Sbjct: 566 QKESR-IMKNEIQDLQTKMRRRKACTI 591
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 28.9 bits (65), Expect = 9.6
Identities = 17/97 (17%), Positives = 37/97 (38%), Gaps = 9/97 (9%)
Query: 361 PERKHMTKEKEDERRECKVKNYSPQAFKFFMEQHIENVIKSHKQRVFRRLQLETEMAKIG 420
+ T + R V+N ++ + +H +I+ H + R+ + I
Sbjct: 836 QCMRDATIALQALLRGYLVRNK----YQMMLREHKSIIIQKHVRGWLARVHYHRTLKAI- 890
Query: 421 LSAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIK 457
QC R+M++++E +LK + K+
Sbjct: 891 --VYLQCCYRRMMAKRE--LKKLKIEARSVERYKKLH 923
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 14,084,830
Number of extensions: 858868
Number of successful extensions: 4294
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3293
Number of HSP's successfully gapped: 996
Length of query: 925
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 823
Effective length of database: 3,853,851
Effective search space: 3171719373
Effective search space used: 3171719373
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (27.8 bits)