BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4002
(378 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328720736|ref|XP_001949525.2| PREDICTED: endonuclease III-like protein 1-like [Acyrthosiphon
pisum]
Length = 280
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 179/263 (68%), Gaps = 36/263 (13%)
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
T + W+P +W++ L+NIR+MRK APVD MG D +A+++ PEV RYHVLISLMLSSQ
Sbjct: 43 TSDSNWKPPNWEKTLDNIRKMRKDIVAPVDNMGCDQAADLNEPPEVVRYHVLISLMLSSQ 102
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKDEVN AAM RLK+HGLT++NI TS+D LGKLI PVGFWKTK ++IK + ILK YN
Sbjct: 103 TKDEVNFAAMQRLKQHGLTVDNILETSDDHLGKLIYPVGFWKTKVQYIKRTTRILKDTYN 162
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIPNTI+ LC+LPG+GPKMAHLCM+ AW VTGIG
Sbjct: 163 GDIPNTIKDLCQLPGIGPKMAHLCMSCAWNEVTGIG------------------------ 198
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD HVHRIS+RLGW K KTPE+TR LESWLP+ LW EVNH+LVGFG
Sbjct: 199 -----------VDTHVHRISNRLGWVKKATKTPENTRIALESWLPKELWREVNHMLVGFG 247
Query: 339 QQICKSQRPSCETCLNKDLCPQG 361
Q IC+ P C++CLNK CP
Sbjct: 248 QTICRPIGPHCDSCLNKKTCPSA 270
>gi|307196709|gb|EFN78168.1| Endonuclease III-like protein 1 [Harpegnathos saltator]
Length = 368
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 204/360 (56%), Gaps = 49/360 (13%)
Query: 15 VDTTKNGKQKRMHMVVKY----DEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNT 70
V +TK G +KR + ++Y D+ + T I D ++ D KT N K
Sbjct: 40 VTSTKTGAKKRAQIKIEYNTAEDDTSVENTEVISTVQIKSE---DMRKSTDTKTVNTKVL 96
Query: 71 LYKSEKLGKRTLLKKQNVHNKDPIPDEN------DTKKTKWEPAHWKEVLNNIREMRKHG 124
KSE + + + + + D+ D K+++W P +W+ +L NIREMRKH
Sbjct: 97 EIKSEDVKQSKDASDMKIEKSEVVRDDTNPKHVKDEKQSQWMPPNWETILENIREMRKHN 156
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
APVD MG A+ + +P V RY L++LMLSSQTKD+V HAAM RL +G + I
Sbjct: 157 TAPVDEMGCHKCADPNASPSVSRYQSLVALMLSSQTKDQVTHAAMQRLNIYGCKPDIIAE 216
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
T +DVLGKLI PVGFWK K ++IK S IL YN DIP TI+ LC LPGVGPKMAH+CM
Sbjct: 217 TPDDVLGKLIYPVGFWKRKVEYIKKTSVILLNKYNGDIPRTIKELCDLPGVGPKMAHICM 276
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
AWG V+GIG VD HVHRIS+RL W
Sbjct: 277 QIAWGEVSGIG-----------------------------------VDTHVHRISNRLEW 301
Query: 305 T-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
K KTPE+TR ELE WLP+ LWSEVNHLLVGFGQ+IC + P C CLNKD+CP +K
Sbjct: 302 VRKQTKTPEETRNELEDWLPKPLWSEVNHLLVGFGQEICLPRFPKCSECLNKDICPYDRK 361
>gi|332373842|gb|AEE62062.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/256 (57%), Positives = 172/256 (67%), Gaps = 36/256 (14%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ +LNN+REMRK DAPVD MG ++ +P V RY L++LMLSSQTKD+VNH
Sbjct: 2 PPNWETMLNNVREMRKDSDAPVDTMGCHKCSDETESPPVIRYQALLALMLSSQTKDQVNH 61
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM RL+EHG T+ENI NTS++ LGKLIIPVGFW+ K K+IK S+ILK YN DIPNTI
Sbjct: 62 AAMLRLREHGCTVENILNTSDEELGKLIIPVGFWRNKVKYIKKTSEILKNQYNCDIPNTI 121
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E + KLPGVGPKMAHLCM AWG VTGIG
Sbjct: 122 EDMLKLPGVGPKMAHLCMKVAWGEVTGIG------------------------------- 150
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRI++R+GW K KTPE T K LESWLP LW+EVNHLLVGFGQQIC+
Sbjct: 151 ----VDTHVHRIANRMGWVKT-KTPEQTEKALESWLPFDLWNEVNHLLVGFGQQICRPIN 205
Query: 347 PSCETCLNKDLCPQGK 362
P C +CLNK +CP K
Sbjct: 206 PQCSSCLNKTICPASK 221
>gi|291226292|ref|XP_002733128.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 318
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/335 (48%), Positives = 198/335 (59%), Gaps = 54/335 (16%)
Query: 45 EKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTK 104
EK A NNP DD N K K++ + K E G+ L + D N++K+ K
Sbjct: 28 EKMRAANNPDDDAPANRKKKGFKRSHI-KIEYEGENERLNE----------DWNESKQLK 76
Query: 105 -------WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
W+P +W+E L NI+EMRK+ DAPVD MG + +A+ + P V RY +L+SLMLS
Sbjct: 77 TVDNPAIWQPVYWREQLENIQEMRKNQDAPVDTMGCERTADTAVGPAVYRYQILVSLMLS 136
Query: 158 SQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKN 217
SQTKD+V AAM RLK HGLTI NI TS+ LG+LI PVGFWK K ++IK S +L+
Sbjct: 137 SQTKDQVTSAAMDRLKTHGLTISNILKTSDKKLGELIYPVGFWKRKVEYIKKTSTLLESQ 196
Query: 218 YNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELI 277
Y+NDIP+TI LC+LPGVGPKMA+LCMN AW TGIG
Sbjct: 197 YDNDIPSTISELCQLPGVGPKMAYLCMNIAWHQTTGIG---------------------- 234
Query: 278 CVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVG 336
VD HVHRIS+RL W K KTPEDTRK L+ WLP SLW E+N LLVG
Sbjct: 235 -------------VDTHVHRISNRLKWVKSTTKTPEDTRKILQEWLPRSLWIEINWLLVG 281
Query: 337 FGQQICKSQRPSCETCLNKDLCPQGKKELAERVKK 371
FGQQIC S P C+ CLN C GK L + KK
Sbjct: 282 FGQQICLSVSPKCQQCLNNHTCLFGKANLQSKKKK 316
>gi|357610921|gb|EHJ67214.1| hypothetical protein KGM_13809 [Danaus plexippus]
Length = 429
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 174/272 (63%), Gaps = 36/272 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W+E L N+R MR + DAPVD+MG S + D P+V RY LISLMLSSQTKD+V
Sbjct: 72 WEPPKWREFLINLRNMRANNDAPVDSMGCHMSMDEDAPPKVMRYQSLISLMLSSQTKDQV 131
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AAM RL+ GLT++NI + S++ LG+LI PVGFWKTK K+IK + LK Y+ DIP+
Sbjct: 132 TFAAMERLRAKGLTVDNILDMSDEELGQLIYPVGFWKTKVKYIKKTTQTLKDQYDGDIPD 191
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
+++ LCKL GVGPKMAH+CM AW VTGIG
Sbjct: 192 SVDKLCKLTGVGPKMAHICMKVAWNKVTGIG----------------------------- 222
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+R+GW K TPEDTRK L+SWLP LWSEVNHL+VGFGQ IC
Sbjct: 223 ------VDTHVHRISNRIGWVKKSTSTPEDTRKALQSWLPFELWSEVNHLMVGFGQTICL 276
Query: 344 SQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
P+C+ CLN D+CP +K+ K+SPKK
Sbjct: 277 PIGPNCQECLNNDICPSSEKDKKSPYKRSPKK 308
>gi|390369569|ref|XP_793669.3| PREDICTED: endonuclease III-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/350 (45%), Positives = 204/350 (58%), Gaps = 58/350 (16%)
Query: 52 NPLDDKEHNDNKTQNKKNTLYKSEKLGK--RTLLKKQNVH------------------NK 91
+P ++ E N+NK ++ K L + ++ GK R+L++KQ V ++
Sbjct: 127 DPPENSESNNNKMKSGKRELSQQDQDGKSKRSLVQKQRVGKSSKASVSKRETSTDCAMSE 186
Query: 92 DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVL 151
D + KK WEP W++ L N+REMRK+ DAPVD+MG + + APEV RYHVL
Sbjct: 187 DTSDGKEKGKKNGWEPEMWRDQLENLREMRKNKDAPVDSMGAEKICDSSAAPEVYRYHVL 246
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
+SLMLSSQTKD+V AAM +L+ HGLT++NI T E +G+LI PVGFWK KA IK +
Sbjct: 247 LSLMLSSQTKDQVTSAAMVKLRSHGLTVDNILKTPEAKIGELIYPVGFWKRKADFIKRTT 306
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
ILK Y DIP +++ L +LPGVGPKMAH+ M+ W +TGIG
Sbjct: 307 QILKDQYQGDIPPSLKELIQLPGVGPKMAHIVMDVGWNQITGIG---------------- 350
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEV 330
VD HVHRIS+RL W K KTPE TR LE WLP LWSEV
Sbjct: 351 -------------------VDTHVHRISNRLKWVQKETKTPEATRVSLEDWLPRDLWSEV 391
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER--VKKSPKKRKS 378
N LLVGFGQQ C P C CLNKD+CP GK+E+ + +K SP K+ +
Sbjct: 392 NVLLVGFGQQTCLPVGPRCLECLNKDICPFGKQEIKRKSPLKTSPVKKNT 441
>gi|390333159|ref|XP_001200032.2| PREDICTED: endonuclease III-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 409
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 190/327 (58%), Gaps = 54/327 (16%)
Query: 52 NPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVH------------------NKDP 93
+P ++ E N+NK ++ K L + + KR+L++KQ V ++D
Sbjct: 105 DPPENSESNNNKMKSGKRELSQQDGKSKRSLVQKQRVGKSSKASVSKRETSTDCAMSEDT 164
Query: 94 IPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLIS 153
+ KK +WEP W++ L N+REMRK+ DAPVD+MG + + APEV RYHVL+S
Sbjct: 165 SDGKEKGKKNEWEPEMWRDQLENLREMRKNKDAPVDSMGAEKICDSSAAPEVYRYHVLLS 224
Query: 154 LMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
LMLSSQTKD+V AAM +L+ HGLT++NI T E +G+LI PVGFWK KA IK + I
Sbjct: 225 LMLSSQTKDQVTSAAMVKLRSHGLTVDNILKTPEAKIGELIYPVGFWKRKADFIKRTTQI 284
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
LK Y DIP +++ L +LPGVGPKMAH+ M+ W +TGIG
Sbjct: 285 LKDQYQGDIPPSLKELIQLPGVGPKMAHIVMDVGWNQITGIG------------------ 326
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNH 332
VD HVHRIS+RL W K KTPE TR LE WLP LWSEVN
Sbjct: 327 -----------------VDTHVHRISNRLKWVQKETKTPEATRVSLEDWLPRDLWSEVNV 369
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCP 359
LLVGFGQQ C P C CLNKD+CP
Sbjct: 370 LLVGFGQQTCLPVGPRCLECLNKDICP 396
>gi|321475198|gb|EFX86161.1| hypothetical protein DAPPUDRAFT_193197 [Daphnia pulex]
Length = 306
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/267 (53%), Positives = 172/267 (64%), Gaps = 37/267 (13%)
Query: 97 ENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLML 156
EN T+K + P +W+ VLNNI+ MR DAPVD MG + A+ +PEV+R+ VL+SLML
Sbjct: 71 ENTTEK-PFLPENWEAVLNNIQIMRAEKDAPVDQMGAEQCADSASSPEVKRFQVLVSLML 129
Query: 157 SSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SSQTKD++ +AAM +LK+HGLT+EN+ NT E V+ LI PVGFWK KA +IK + IL
Sbjct: 130 SSQTKDQLTYAAMEKLKKHGLTVENVINTDEKVIANLIHPVGFWKKKASYIKRTAVILAA 189
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
YNNDIP T+E LCKLPGVG KMA L +N W GIG
Sbjct: 190 QYNNDIPQTVEELCKLPGVGQKMAVLTVNIGWKKTIGIG--------------------- 228
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLV 335
VD HVHRI++RLGWT + KTPE+T+KELE WLP SLW EVN LLV
Sbjct: 229 --------------VDTHVHRIANRLGWTRRPTKTPENTQKELEDWLPRSLWDEVNILLV 274
Query: 336 GFGQQICKSQRPSCETCLNKDLCPQGK 362
GFGQQ C +P C TCLNK+LCP GK
Sbjct: 275 GFGQQRCTPIKPQCSTCLNKNLCPFGK 301
>gi|91088451|ref|XP_968911.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 283
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 165/259 (63%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W++ L NIREMRK+ DAPVD+MG PEV RY L++LMLSSQTKD+V
Sbjct: 56 PPDWEKTLTNIREMRKNYDAPVDSMGCHKCTEESATPEVFRYQALLALMLSSQTKDQVVF 115
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
+AM +L ++G ++NI TS++ LG+LI PVGFWKTK KHIK AS+ILK YN DIP T+
Sbjct: 116 SAMQKLHKYGCNVDNILATSDEKLGELIYPVGFWKTKVKHIKKASEILKNEYNGDIPRTV 175
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E LCKLPGVGPKMA+LCM AW VTGIG
Sbjct: 176 EDLCKLPGVGPKMANLCMKTAWNEVTGIG------------------------------- 204
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRIS+R+GW K KTPE+T+K LE WLP LW E+ LLVGFGQQ CK +
Sbjct: 205 ----VDTHVHRISNRIGWVKT-KTPEETKKSLERWLPRDLWDEIGALLVGFGQQTCKPVK 259
Query: 347 PSCETCLNKDLCPQGKKEL 365
P C TCLN +CP G KE+
Sbjct: 260 PQCGTCLNNSVCPFGTKEV 278
>gi|260801749|ref|XP_002595758.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
gi|229281005|gb|EEN51770.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
Length = 239
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 170/274 (62%), Gaps = 37/274 (13%)
Query: 104 KWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
+WEP W+E L NI+ MR DAPVD+MG + + APEV+RYH LISLMLSSQTKD+
Sbjct: 1 RWEPERWREQLENIKRMRAARDAPVDSMGCQTCPDKNAAPEVKRYHALISLMLSSQTKDQ 60
Query: 164 VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
+ AAM RL +HGLT++NI TS+ LG+LI PVGFWKTK K+IK + ILK Y DIP
Sbjct: 61 MTSAAMKRLIDHGLTVDNILKTSDQKLGELIYPVGFWKTKVKYIKNTTQILKDQYGGDIP 120
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T+ + KLPGVGPKMA+L M+ WG V GI
Sbjct: 121 ATVAEMVKLPGVGPKMAYLTMDVGWGKVEGI----------------------------- 151
Query: 284 KKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
CVD HVHRIS+RLGW K K PEDTR LE WLP WSE+N LLVGFGQQ C
Sbjct: 152 ------CVDTHVHRISNRLGWLKKPTKVPEDTRVALEEWLPREHWSELNWLLVGFGQQTC 205
Query: 343 KSQRPSCETCLNKDLCPQGKKEL-AERVKKSPKK 375
P C CLNK++CP GK +L + KKSPKK
Sbjct: 206 LPVSPKCSGCLNKEICPFGKSQLRYSKNKKSPKK 239
>gi|270011744|gb|EFA08192.1| hypothetical protein TcasGA2_TC005819 [Tribolium castaneum]
Length = 266
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 165/259 (63%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W++ L NIREMRK+ DAPVD+MG PEV RY L++LMLSSQTKD+V
Sbjct: 39 PPDWEKTLTNIREMRKNYDAPVDSMGCHKCTEESATPEVFRYQALLALMLSSQTKDQVVF 98
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
+AM +L ++G ++NI TS++ LG+LI PVGFWKTK KHIK AS+ILK YN DIP T+
Sbjct: 99 SAMQKLHKYGCNVDNILATSDEKLGELIYPVGFWKTKVKHIKKASEILKNEYNGDIPRTV 158
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E LCKLPGVGPKMA+LCM AW VTGIG
Sbjct: 159 EDLCKLPGVGPKMANLCMKTAWNEVTGIG------------------------------- 187
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRIS+R+GW K KTPE+T+K LE WLP LW E+ LLVGFGQQ CK +
Sbjct: 188 ----VDTHVHRISNRIGWVKT-KTPEETKKSLERWLPRDLWDEIGALLVGFGQQTCKPVK 242
Query: 347 PSCETCLNKDLCPQGKKEL 365
P C TCLN +CP G KE+
Sbjct: 243 PQCGTCLNNSVCPFGTKEV 261
>gi|242017392|ref|XP_002429173.1| endonuclease III, putative [Pediculus humanus corporis]
gi|212514051|gb|EEB16435.1| endonuclease III, putative [Pediculus humanus corporis]
Length = 292
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 170/263 (64%), Gaps = 38/263 (14%)
Query: 103 TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
+W+P +W++ L NIREMRK APVD MG D + + P+V+R+H L+SLMLSSQTKD
Sbjct: 62 VEWKPNNWEKTLMNIREMRKDKSAPVDTMGCDKCLDSECEPKVKRFHALVSLMLSSQTKD 121
Query: 163 EVNHAAMGRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
+V AAM RLK + GLTIE+I S+D LG+LI PVGFWK K K++K +LK+ ++
Sbjct: 122 QVTFAAMQRLKNYKTGLTIESIIEMSDDTLGELIYPVGFWKQKTKYLKQTCQVLKEKFDG 181
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
DIPNT+ELLC LPGVG KMAH+CM AW +++GIG
Sbjct: 182 DIPNTVELLCSLPGVGLKMAHICMKTAWDVISGIG------------------------- 216
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRI++R+GW K KTPE+TR LESWLP+ LW E+N+LLVGFGQ
Sbjct: 217 ----------VDTHVHRIANRIGWVHKPTKTPEETRISLESWLPKELWEEINNLLVGFGQ 266
Query: 340 QICKSQRPSCETCLNKDLCPQGK 362
QICK +P C +C N+ CP K
Sbjct: 267 QICKPTKPLCNSCKNQPFCPYAK 289
>gi|395515750|ref|XP_003762062.1| PREDICTED: endonuclease III-like protein 1 [Sarcophilus harrisii]
Length = 297
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 169/276 (61%), Gaps = 38/276 (13%)
Query: 90 NKDPIPDENDT--KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR 147
++D D NDT KK+KWEP +W L NIREMRK DAPVD MG +H + + PEV R
Sbjct: 55 DRDGEVDGNDTTSKKSKWEPPNWNLQLENIREMRKSEDAPVDHMGAEHCYDQNAPPEVMR 114
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+SLMLSSQTKD++ AAMGRL+E GLT+++I + LG+LI PVGFW++K ++I
Sbjct: 115 YQVLLSLMLSSQTKDQITAAAMGRLRERGLTLDSILQMDDTTLGQLIYPVGFWRSKVRYI 174
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S ILK+ Y DIP T+E L LPGVGPKMAHL M AWG V+GI
Sbjct: 175 KQTSKILKQQYGGDIPATVEELVALPGVGPKMAHLAMAIAWGKVSGI------------- 221
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
VD HVHRI++RL WT K K PE+TR LE WLP L
Sbjct: 222 ----------------------AVDTHVHRITNRLKWTKKETKYPEETRAALEDWLPRQL 259
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W E+N LLVGFGQQ C P C CLN+ LCP +
Sbjct: 260 WKEINWLLVGFGQQTCLPVNPRCGDCLNQGLCPAAQ 295
>gi|340716729|ref|XP_003396847.1| PREDICTED: endonuclease III-like protein 1-like [Bombus terrestris]
Length = 352
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/321 (48%), Positives = 192/321 (59%), Gaps = 45/321 (14%)
Query: 46 KNIALNNP-LDDKEHNDNKTQNKKNTLYK--SEKLGKRTLLKKQNVHNKDPIPD---END 99
KNI+ + DDK N KT KK T K E++ T K V +D + D +N+
Sbjct: 59 KNISTTSGYFDDKVQN--KTVKKKRTPVKIEYEEMKNATESKPNEVKVED-LQDGTVKNE 115
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
T + KW P +W+ +L N++EMRKH APVD MG + + +V RY LI+LMLSSQ
Sbjct: 116 TVEDKWMPLNWETILENVKEMRKHKTAPVDEMGCHKCIDPNATAKVARYQSLIALMLSSQ 175
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKD+V HAAM RL +G + E I T +D LGKLI PVGFWK K ++IK S IL + YN
Sbjct: 176 TKDQVTHAAMQRLISYGCSPELISGTPDDTLGKLIYPVGFWKRKVQYIKKTSKILIEKYN 235
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIP T+E LC+LPGVGPKMAH+CM AWG V+GIG
Sbjct: 236 GDIPRTLEELCQLPGVGPKMAHICMQIAWGEVSGIG------------------------ 271
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD HVHRI +RLGW K K PEDTR +E WLP+ LWSEVN+LLVGFG
Sbjct: 272 -----------VDTHVHRICNRLGWVKKPTKIPEDTRIAVEEWLPKDLWSEVNYLLVGFG 320
Query: 339 QQICKSQRPSCETCLNKDLCP 359
Q+IC + P C+ CLNKD+CP
Sbjct: 321 QEICLPRFPKCDECLNKDICP 341
>gi|307185012|gb|EFN71241.1| Endonuclease III-like protein 1 [Camponotus floridanus]
Length = 349
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 199/350 (56%), Gaps = 56/350 (16%)
Query: 17 TTKNGKQKRMHMVVKYDEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEK 76
T K G +KR+ + ++YD E I + N D + ++QN K E
Sbjct: 41 TIKTGAKKRLPIKIEYD---------ATEDGINVEN-TDATSAIETQSQNVK------ES 84
Query: 77 LGKRTLLKKQNVHNKDPIPDENDTKKTK----WEPAHWKEVLNNIREMRKHGDAPVDAMG 132
+T+ ++ + I + D+K K W P +W+ +L N++EMRKH APVD MG
Sbjct: 85 SALKTVKTEECEMKVESIEESTDSKNIKDEKRWMPPNWETILENVKEMRKHKTAPVDDMG 144
Query: 133 WDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGK 192
A+ + +P V RY LI+LMLSSQTKD+V HAAM RL +G + I T +DVLGK
Sbjct: 145 CHKCADPNASPSVSRYQSLIALMLSSQTKDQVTHAAMQRLNTYGCKPDIIAATPDDVLGK 204
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
LI PVGFWK K ++IK S IL Y+ DIP TI+ LC+LPGVGPKM H+CM AWG V+
Sbjct: 205 LIYPVGFWKRKVEYIKKTSVILLDKYDGDIPKTIKELCELPGVGPKMGHICMQIAWGEVS 264
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTP 311
GIG VD HVHRI +RL W K KTP
Sbjct: 265 GIG-----------------------------------VDTHVHRICNRLEWMKKPTKTP 289
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
E+TR ELE WLP+SLWS++N+LLVGFGQ+IC + P C+ CLNK++CP
Sbjct: 290 EETRNELEDWLPKSLWSKINYLLVGFGQEICLPRFPKCDECLNKNICPYA 339
>gi|227908769|ref|NP_032769.2| endonuclease III-like protein 1 [Mus musculus]
Length = 300
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 164/268 (61%), Gaps = 36/268 (13%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
D K WEP +W++ L NIR MR DAPVD +G +H + +P+VRRY VL+SLM
Sbjct: 66 DAEPLKVPVWEPQNWQQQLANIRIMRSKKDAPVDQLGAEHCYDASASPKVRRYQVLLSLM 125
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD+V AM RL+ GLT+E+I T +D LG+LI PVGFW+ K K+IK + IL+
Sbjct: 126 LSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYIKQTTAILQ 185
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y DIP ++ L LPGVGPKMAHL M AWG ++GI
Sbjct: 186 QRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIA-------------------- 225
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRI++RL WT K+ KTPE+TRK LE WLP LWSEVN LL
Sbjct: 226 ---------------VDTHVHRIANRLRWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 270
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGK 362
VGFGQQIC P C+ CLNK LCP +
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAAQ 298
>gi|387015722|gb|AFJ49980.1| Endonuclease III-like protein 1-like [Crotalus adamanteus]
Length = 282
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 169/262 (64%), Gaps = 36/262 (13%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSS 158
+ KK KWEPA+W++ L NIREMR+ DAPVD MG + + PEV+RY +L+SLMLSS
Sbjct: 51 EPKKLKWEPANWEQQLANIREMRRERDAPVDQMGASACFDREAPPEVKRYQILLSLMLSS 110
Query: 159 QTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
QT+D+V AAM RL++HGLT++ I T E+ LG+LI PVGFW+ KA++++ + ILK++Y
Sbjct: 111 QTRDQVTFAAMMRLRKHGLTVDQILETDEEALGRLIYPVGFWRNKARYVQQTTAILKRDY 170
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELIC 278
DIP T+ L KLPGVGPKMAHL M+ AW +GIG
Sbjct: 171 AGDIPQTVAELVKLPGVGPKMAHLVMDIAWKKASGIG----------------------- 207
Query: 279 VRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGF 337
VD HVHRI +RL W K K PE+TR+ LE WLP +LWSE+N LLVGF
Sbjct: 208 ------------VDTHVHRICNRLKWAKKETKLPEETRQALEEWLPRTLWSEINWLLVGF 255
Query: 338 GQQICKSQRPSCETCLNKDLCP 359
GQQIC RP C CLN+++CP
Sbjct: 256 GQQICLPVRPHCSECLNRNICP 277
>gi|432102524|gb|ELK30095.1| Endonuclease III-like protein 1 [Myotis davidii]
Length = 312
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 164/263 (62%), Gaps = 36/263 (13%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K WEP W++ L NIR MR DAPVD +G +H + + P+V+RY VL+SLMLSSQT
Sbjct: 83 KVPSWEPQDWQQQLANIRTMRSEKDAPVDQLGAEHCYDHSVPPKVQRYQVLLSLMLSSQT 142
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AM RL+ GLT++NI T + LG LI PVGFW++K K+IK S IL++NY+
Sbjct: 143 KDQVTAGAMERLRARGLTVDNILKTDDSTLGALIYPVGFWRSKVKYIKQTSAILQQNYDG 202
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
DIP ++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 203 DIPASVTELMALPGVGPKMAHLAMAVAWGTVSGI-------------------------- 236
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRI++RL WT KV K+PE+TR LE WLP LWSE+N LLVGFGQ
Sbjct: 237 ---------AVDTHVHRIANRLRWTKKVTKSPEETRAALEDWLPRDLWSEINGLLVGFGQ 287
Query: 340 QICKSQRPSCETCLNKDLCPQGK 362
QIC RP C+TCLN+ LCP +
Sbjct: 288 QICLPVRPRCQTCLNQALCPAAQ 310
>gi|292610084|ref|XP_001346643.3| PREDICTED: RUN domain containing 3A [Danio rerio]
Length = 430
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/315 (45%), Positives = 181/315 (57%), Gaps = 41/315 (13%)
Query: 55 DDKEHNDNKTQNKKNTLYKS-----EKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAH 109
DD H N K+T Y + E+ + L ++ + E + K EP
Sbjct: 70 DDPTHAHNPADCVKSTSYNTTSKMKEEPDQALLSPRKRGRGHLKVEYETEGVGLKREPYD 129
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+ L+ IREMR DAPVD MG + + PEVRRY VLISLMLSSQTKD+V AM
Sbjct: 130 WRTQLSFIREMRSKRDAPVDQMGAEKCYDTQGLPEVRRYQVLISLMLSSQTKDQVTAGAM 189
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RL+EHGL+++ I ++ LGKLI PVGFW+TK K+IK A+ ++++ + DIPNT+E L
Sbjct: 190 QRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGGDIPNTVEGL 249
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
+LPGVGPKMAHL M+ AW V+GIG
Sbjct: 250 IRLPGVGPKMAHLAMDIAWNQVSGIG---------------------------------- 275
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VD HVHRIS+RLGWT K KTPE+TR+ LE WLP LWSE+N LLVGFGQQ+C P
Sbjct: 276 -VDTHVHRISNRLGWTKKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPL 334
Query: 349 CETCLNKDLCPQGKK 363
C CLN+ CP +
Sbjct: 335 CSVCLNQHTCPSAHR 349
>gi|45593498|sp|O35980.1|NTHL1_MOUSE RecName: Full=Endonuclease III-like protein 1
gi|2351099|dbj|BAA22080.1| endonuclease III homologue [Mus musculus]
gi|2407946|emb|CAA70866.1| endonuclease III homologue 1 [Mus musculus]
gi|3219302|dbj|BAA28846.1| homologue of endonuclease III [Mus musculus]
gi|6688669|emb|CAB65239.1| Endonuclease III homologue 1 [Mus musculus]
gi|148690400|gb|EDL22347.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_b [Mus
musculus]
gi|187952063|gb|AAI38853.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
gi|187954093|gb|AAI38856.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
Length = 300
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 163/268 (60%), Gaps = 36/268 (13%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
D K WEP +W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLM
Sbjct: 66 DAEPLKVPVWEPQNWQQQLANIRIMRSKKDAPVDQLGAEHCYDASAPPKVRRYQVLLSLM 125
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD+V AM RL+ GLT+E+I T +D LG+LI PVGFW+ K K+IK + IL+
Sbjct: 126 LSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYIKQTTAILQ 185
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y DIP ++ L LPGVGPKMAHL M AWG ++GI
Sbjct: 186 QRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIA-------------------- 225
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRI++RL WT K+ KTPE+TRK LE WLP LWSEVN LL
Sbjct: 226 ---------------VDTHVHRIANRLRWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 270
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGK 362
VGFGQQIC P C+ CLNK LCP +
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAAQ 298
>gi|126335528|ref|XP_001366843.1| PREDICTED: endonuclease III-like protein 1-like [Monodelphis
domestica]
Length = 292
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/268 (51%), Positives = 165/268 (61%), Gaps = 36/268 (13%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
D + +KK KWEP +W+ L NIREMRK DAPVD MG + + + APEV RY VL+SLM
Sbjct: 58 DGSTSKKLKWEPLNWRLQLENIREMRKSKDAPVDHMGAEQCHDQNAAPEVMRYQVLLSLM 117
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD+V AAMGRL+E GLT++NI ++ LG+LI PVGFW++K ++IK S ILK
Sbjct: 118 LSSQTKDQVTAAAMGRLRERGLTLDNILQMDDNTLGQLIYPVGFWRSKVQYIKQTSKILK 177
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y DIP T+ L LPGVGPKMAHL M AW V+GI
Sbjct: 178 QQYGGDIPATVAELVALPGVGPKMAHLAMAIAWDTVSGI--------------------- 216
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRI++RL WT K K PE+TR LE WLP LW E+N LL
Sbjct: 217 --------------AVDTHVHRITNRLKWTKKGTKYPEETRAALEDWLPRQLWKEINWLL 262
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGK 362
VGFGQQIC P C CLN+ LCP +
Sbjct: 263 VGFGQQICLPVNPRCGNCLNRGLCPAAQ 290
>gi|113205550|ref|NP_001037884.1| nth endonuclease III-like 1 [Xenopus (Silurana) tropicalis]
gi|89267879|emb|CAJ83279.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
gi|166796488|gb|AAI59396.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
Length = 300
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/268 (50%), Positives = 166/268 (61%), Gaps = 36/268 (13%)
Query: 97 ENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLML 156
E K+ KW+P +W + L NIR+MR DAPVD MG + + + APEV RY +L+SLML
Sbjct: 64 ETVAKRPKWQPKNWAQHLENIRQMRSRRDAPVDQMGAEKCYDQNAAPEVMRYQILLSLML 123
Query: 157 SSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SSQTKD+V AAM RL++HGLT+ I T + LGKLI PVGFWK K K+IK ++IL++
Sbjct: 124 SSQTKDQVTSAAMCRLRQHGLTVSRILETDDGTLGKLIYPVGFWKNKVKYIKQTTEILQE 183
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y DIP+ + L KLPGVGPKMAHL M+ AW V+GIG
Sbjct: 184 KYGGDIPDNVTDLVKLPGVGPKMAHLVMDIAWNNVSGIG--------------------- 222
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLV 335
VD HVHRIS+RL W K KTPE+TR +E W+P LWSE+N LLV
Sbjct: 223 --------------VDTHVHRISNRLKWVRKETKTPEETRVAMEDWMPRELWSEINWLLV 268
Query: 336 GFGQQICKSQRPSCETCLNKDLCPQGKK 363
GFGQQ+C P C CLNKD+CP KK
Sbjct: 269 GFGQQVCLPVSPRCSECLNKDICPGAKK 296
>gi|350421872|ref|XP_003492984.1| PREDICTED: endonuclease III-like protein 1-like [Bombus impatiens]
Length = 352
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 192/321 (59%), Gaps = 45/321 (14%)
Query: 46 KNIALNNP-LDDKEHNDNKTQNKKNTLYK--SEKLGKRTLLKKQNVHNKDPIPD---END 99
KNI+ + DDK N KT KK T K E++ T K V +D + D +N+
Sbjct: 59 KNISTTSGYFDDKVQN--KTVKKKRTPVKIEYEEMKNATESKPNEVKVED-LQDGTVKNE 115
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
T + KW P +W+ +L N++EMRKH APVD MG + + +V RY LI+LMLSSQ
Sbjct: 116 TVEDKWMPLNWETILENVKEMRKHKTAPVDEMGCHKCIDPNATAKVARYQSLIALMLSSQ 175
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKD+V HAAM RL +G T E I T +D LGKLI PVGFWK K ++IK S IL + YN
Sbjct: 176 TKDQVTHAAMQRLITYGCTPELISGTPDDTLGKLIYPVGFWKRKVQYIKKTSKILIEKYN 235
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIP T++ LC+LPGVGPKM+H+CM AWG V+GIG
Sbjct: 236 GDIPRTLKELCQLPGVGPKMSHICMQIAWGEVSGIG------------------------ 271
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD HVHRI +RLGW K K PEDTR +E WLP+ LWSEVN+LLVGFG
Sbjct: 272 -----------VDTHVHRICNRLGWVKKSTKIPEDTRIAVEEWLPKDLWSEVNYLLVGFG 320
Query: 339 QQICKSQRPSCETCLNKDLCP 359
Q+IC + P C+ CLNKD+CP
Sbjct: 321 QEICLPRFPKCDECLNKDICP 341
>gi|157787119|ref|NP_001099198.1| endonuclease III-like protein 1 [Rattus norvegicus]
gi|149052032|gb|EDM03849.1| nth (endonuclease III)-like 1 (E.coli) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 300
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 171/286 (59%), Gaps = 42/286 (14%)
Query: 84 KKQNVH------NKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSA 137
KKQ VH N + D K WEP +W++ L NIR MR DAPVD +G +
Sbjct: 48 KKQKVHVAYEVANGEEGEDAEPLKVPVWEPQNWQQQLANIRIMRSKKDAPVDQLGAEQCY 107
Query: 138 NVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPV 197
++ P+VRRY VL+SLMLSSQTKD+V AM RL+ GLT+E+I T +D+LG+LI PV
Sbjct: 108 DITAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDLLGRLIYPV 167
Query: 198 GFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKD 257
GFW++K K IK + IL++ Y DIP ++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 168 GFWRSKVKFIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIA-- 225
Query: 258 ESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRK 316
VD HVHRI++RL WT K+ K+PE+TR+
Sbjct: 226 ---------------------------------VDTHVHRIANRLKWTKKMTKSPEETRR 252
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
LE WLP LWSE+N LLVGFGQQIC P C+ CLNK LCP +
Sbjct: 253 NLEEWLPRVLWSEINGLLVGFGQQICLPVHPRCQACLNKALCPAAQ 298
>gi|219519404|gb|AAI45444.1| Nthl1 protein [Mus musculus]
Length = 280
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 163/268 (60%), Gaps = 36/268 (13%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
D K WEP +W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLM
Sbjct: 46 DAEPLKVPVWEPQNWQQQLANIRIMRSKKDAPVDQLGAEHCYDASAPPKVRRYQVLLSLM 105
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD+V AM RL+ GLT+E+I T +D LG+LI PVGFW+ K K+IK + IL+
Sbjct: 106 LSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYIKQTTAILQ 165
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y DIP ++ L LPGVGPKMAHL M AWG ++GI
Sbjct: 166 QRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIA-------------------- 205
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRI++RL WT K+ KTPE+TRK LE WLP LWSEVN LL
Sbjct: 206 ---------------VDTHVHRIANRLRWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 250
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGK 362
VGFGQQIC P C+ CLNK LCP +
Sbjct: 251 VGFGQQICLPVHPRCQACLNKALCPAAQ 278
>gi|157103485|ref|XP_001648002.1| endonuclease iii [Aedes aegypti]
gi|108880533|gb|EAT44758.1| AAEL003906-PA [Aedes aegypti]
Length = 396
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 175/292 (59%), Gaps = 40/292 (13%)
Query: 88 VHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-EVR 146
+ +K P+ E K+ KWEP +W+++L+NIR+MR+ APVD MG D + P ++R
Sbjct: 135 IEDKSPLEAEASVKQAKWEPDNWRQILDNIRQMRQMMPAPVDTMGCDQFKDDQTVPAKIR 194
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
RYH L+SLMLSSQTKD+VN M RL++HGLT EN+ T VL KLI PV F+K KAK
Sbjct: 195 RYHTLVSLMLSSQTKDQVNFECMQRLRKHGLTPENVVATDVAVLEKLIYPVSFYKNKAKF 254
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK +S IL +Y+ DIP+TI+ L KLPGVG KMAHLCM AW +VTGIG
Sbjct: 255 IKQSSQILLDSYDGDIPDTIDGLLKLPGVGKKMAHLCMRSAWNVVTGIG----------- 303
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPES 325
VD HVHRI + L W K KTPEDTR LE WLP
Sbjct: 304 ------------------------VDTHVHRICNWLQWVPKQTKTPEDTRVALEKWLPFE 339
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
LW EVN LLVGFGQ IC + P C CLN +CP K ++K+P KR+
Sbjct: 340 LWEEVNQLLVGFGQTICPATNPYCNECLNATICPAKGK---HGIRKTPIKRE 388
>gi|440913510|gb|ELR62959.1| Endonuclease III-like protein 1, partial [Bos grunniens mutus]
Length = 316
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 161/259 (62%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W+P W++ L+NIR MR DAPVD +G +H + +P+VRRY VL+SLMLSSQTKD+V
Sbjct: 91 WQPQDWRQQLDNIRTMRSGKDAPVDQLGAEHCFDPSASPKVRRYQVLLSLMLSSQTKDQV 150
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW++K K+IK S IL++ Y+ DIP
Sbjct: 151 TAGAMQRLRARGLTVDSILQTDDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIPA 210
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 211 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 241
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR+ LE WLP LWSE+N LLVGFGQQ C
Sbjct: 242 ------VDTHVHRIANRLRWTKKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCL 295
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 296 PIRPRCQACLNRALCPAAR 314
>gi|332028140|gb|EGI68191.1| Endonuclease III-like protein 1 [Acromyrmex echinatior]
Length = 341
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 186/322 (57%), Gaps = 49/322 (15%)
Query: 53 PLDDKEHNDNKTQNKKNTLYKSEKLGKRTLL----------KKQNVHNKDPIPDENDTKK 102
P+ K +N+T + K TL KSE + T + K +NV K + +N K
Sbjct: 52 PIKIKHEIENET-DVKETLIKSEDVELSTGIQDIKTEECEIKNENVELK--LNPKNVKDK 108
Query: 103 TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
+W P W+ +L NI+EMRK APVD MG + D +P V RY L++LMLSSQTKD
Sbjct: 109 KQWMPPDWEIILENIKEMRKSETAPVDTMGCHKCTDPDASPVVSRYQSLVALMLSSQTKD 168
Query: 163 EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
+V HAAM RL +G I T +DVLGKLI PVGFWK K ++IK S IL Y DI
Sbjct: 169 QVTHAAMQRLNTYGCKPNIIAATPDDVLGKLIYPVGFWKKKVEYIKKTSVILLDKYGGDI 228
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P T++ LC+LPGVGPKMAHLCM AWG V+GIG
Sbjct: 229 PKTVKELCELPGVGPKMAHLCMRTAWGEVSGIG--------------------------- 261
Query: 283 EKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VD HVHRI++RLGW K + KTPE TR ELE WLP+ LWSEVNHLLVGFGQ+
Sbjct: 262 --------VDTHVHRIANRLGWVKKLTKTPEQTRNELEDWLPKPLWSEVNHLLVGFGQET 313
Query: 342 CKSQRPSCETCLNKDLCPQGKK 363
C + P C CLNK++CP K
Sbjct: 314 CLPRFPKCSECLNKNICPFASK 335
>gi|114051958|ref|NP_001039862.1| endonuclease III-like protein 1 [Bos taurus]
gi|109892805|sp|Q2KID2.1|NTHL1_BOVIN RecName: Full=Endonuclease III-like protein 1
gi|86826431|gb|AAI12682.1| Nth endonuclease III-like 1 (E. coli) [Bos taurus]
gi|296473490|tpg|DAA15605.1| TPA: nth endonuclease III-like 1 [Bos taurus]
Length = 305
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 161/259 (62%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W+P W++ L+NIR MR DAPVD +G +H + +P+VRRY VL+SLMLSSQTKD+V
Sbjct: 80 WQPQDWRQQLDNIRTMRSGKDAPVDQLGAEHCFDPSASPKVRRYQVLLSLMLSSQTKDQV 139
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW++K K+IK S IL++ Y+ DIP
Sbjct: 140 TAGAMQRLRARGLTVDSILQTDDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIPA 199
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 200 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 229
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR+ LE WLP LWSE+N LLVGFGQQ C
Sbjct: 230 -----AVDTHVHRIANRLRWTKKATKSPEETRRALEEWLPRELWSEINGLLVGFGQQTCL 284
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 285 PIRPRCQACLNRALCPAAR 303
>gi|301782301|ref|XP_002926577.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Ailuropoda melanoleuca]
Length = 316
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 158/259 (61%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 88 WEPLAWRQQLQNIRTMRSEKDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQV 147
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 148 TAGAMQRLRSRGLTVDSILQTDDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 207
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
T+ L LPGVGPKMAHL M AWG V+GI
Sbjct: 208 TVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 237
Query: 285 KIPQLCVDVHVHRISHRLGWTKVF-KTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RLGWT+ K+PE TR LE+WLP LWSE+N LLVGFGQQ+C
Sbjct: 238 -----AVDTHVHRIANRLGWTETATKSPEKTRAALEAWLPRELWSEINGLLVGFGQQVCL 292
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C+ CLN+ LCP +
Sbjct: 293 PTHPRCQDCLNRGLCPAAQ 311
>gi|126631837|gb|AAI33923.1| LOC100008368 protein [Danio rerio]
Length = 340
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/261 (50%), Positives = 164/261 (62%), Gaps = 36/261 (13%)
Query: 104 KWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
K EP W+ L+ IREMR DAPVD MG ++ + PEVRRY VLISLMLSSQTKD+
Sbjct: 34 KREPCDWRTQLSFIREMRSKRDAPVDQMGAENCYDTQALPEVRRYQVLISLMLSSQTKDQ 93
Query: 164 VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
V AM RL+EHGL+++ I ++ LGKLI PVGFW+TK K+IK A+ ++++ + DIP
Sbjct: 94 VTAGAMQRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGGDIP 153
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
NT+E L +LPGVGPKMAHL M+ AW V+GIG
Sbjct: 154 NTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIG---------------------------- 185
Query: 284 KKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VD HVHRIS+RLGWT K KTPE+TR+ LE WLP LWSE+N LLVGFGQQ+C
Sbjct: 186 -------VDTHVHRISNRLGWTKKETKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVC 238
Query: 343 KSQRPSCETCLNKDLCPQGKK 363
P C CLN+ CP +
Sbjct: 239 LPVGPLCSVCLNQHTCPSAHR 259
>gi|148690399|gb|EDL22346.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_a [Mus
musculus]
Length = 277
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/268 (50%), Positives = 163/268 (60%), Gaps = 36/268 (13%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
D K WEP +W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLM
Sbjct: 43 DAEPLKVPVWEPQNWQQQLANIRIMRSKKDAPVDQLGAEHCYDASAPPKVRRYQVLLSLM 102
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD+V AM RL+ GLT+E+I T +D LG+LI PVGFW+ K K+IK + IL+
Sbjct: 103 LSSQTKDQVTAGAMQRLRARGLTVESILQTDDDTLGRLIYPVGFWRNKVKYIKQTTAILQ 162
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y DIP ++ L LPGVGPKMAHL M AWG ++GI
Sbjct: 163 QRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIA-------------------- 202
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRI++RL WT K+ KTPE+TRK LE WLP LWSEVN LL
Sbjct: 203 ---------------VDTHVHRIANRLRWTKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 247
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGK 362
VGFGQQIC P C+ CLNK LCP +
Sbjct: 248 VGFGQQICLPVHPRCQACLNKALCPAAQ 275
>gi|417398676|gb|JAA46371.1| Putative endonuclease iii [Desmodus rotundus]
Length = 305
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 163/267 (61%), Gaps = 39/267 (14%)
Query: 97 ENDTKKTK---WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLIS 153
E TK K WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+S
Sbjct: 69 EEGTKPLKVPSWEPQDWQQQLANIRTMRSGKDAPVDQLGAEHCYDPGAPPKVRRYQVLLS 128
Query: 154 LMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
LMLSSQTKD+V AM RL+ GLT+++I T + LG+LI PVGFW+ K K+IK S I
Sbjct: 129 LMLSSQTKDQVTAGAMKRLQARGLTVDSILQTDDITLGRLIYPVGFWRNKVKYIKQTSAI 188
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+++Y DIP ++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 189 LQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------- 229
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNH 332
VD HVHRI++RLGWT K K+PE+TR LE WLP LWSE+N
Sbjct: 230 ----------------AVDTHVHRIANRLGWTKKKTKSPEETRAALEEWLPRDLWSEING 273
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCP 359
LLVGFGQQIC RP C+ CLN+ LCP
Sbjct: 274 LLVGFGQQICLPVRPRCQACLNQALCP 300
>gi|281342124|gb|EFB17708.1| hypothetical protein PANDA_016228 [Ailuropoda melanoleuca]
Length = 266
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 158/259 (61%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 41 WEPLAWRQQLQNIRTMRSEKDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQV 100
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 101 TAGAMQRLRSRGLTVDSILQTDDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 160
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
T+ L LPGVGPKMAHL M AWG V+GI
Sbjct: 161 TVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 190
Query: 285 KIPQLCVDVHVHRISHRLGWTKVF-KTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RLGWT+ K+PE TR LE+WLP LWSE+N LLVGFGQQ+C
Sbjct: 191 -----AVDTHVHRIANRLGWTETATKSPEKTRAALEAWLPRELWSEINGLLVGFGQQVCL 245
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C+ CLN+ LCP +
Sbjct: 246 PTHPRCQDCLNRGLCPAAQ 264
>gi|354478697|ref|XP_003501551.1| PREDICTED: endonuclease III-like protein 1-like [Cricetulus
griseus]
gi|344248342|gb|EGW04446.1| Endonuclease III-like protein 1 [Cricetulus griseus]
Length = 300
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 165/276 (59%), Gaps = 36/276 (13%)
Query: 88 VHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR 147
V N + D K WEP +W++ L NI+ MR DAPVD +G +H + P+VRR
Sbjct: 58 VSNGEKGEDAEPLKVPVWEPQNWQQQLANIQIMRSKKDAPVDQLGAEHCYDTSAPPKVRR 117
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L+SLMLSSQTKD+V AM RL+ GLT+E+I T +D+LG+LI PVGFW+ K K I
Sbjct: 118 YQILLSLMLSSQTKDQVTAGAMQRLRARGLTVESILQTDDDMLGRLIYPVGFWRNKVKFI 177
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL++ Y DIP ++ L LPGVGPKMAHL M AWG ++GI
Sbjct: 178 KQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMAVAWGTISGIA------------ 225
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESL 326
VD HVHRI++RL WTK V KTPE+TR LE WLP L
Sbjct: 226 -----------------------VDTHVHRITNRLRWTKNVTKTPEETRTALEEWLPRGL 262
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
WSE+N L+VGFGQQIC P C+ CLN+ LCP K
Sbjct: 263 WSEINGLMVGFGQQICLPVHPQCQACLNQALCPAAK 298
>gi|326929092|ref|XP_003210705.1| PREDICTED: endonuclease III-like protein 1-like [Meleagris
gallopavo]
Length = 272
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 169/276 (61%), Gaps = 40/276 (14%)
Query: 93 PIPDENDTKK----TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRY 148
P+ E +T+ KWEP +W++ L IREMR+H DAPVD MG D + + P+V RY
Sbjct: 31 PVAYEAETRPESPGPKWEPENWRQQLERIREMRRHRDAPVDEMGVDKCYDTNAPPQVMRY 90
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
VL+SLMLSSQTKD+V AAM RL++ GLT+++I + LG++I PVGFW+ K K+IK
Sbjct: 91 QVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYIK 150
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ ILK+NY DIP+T+E L KLPGVGPKMAHL MN AW VTGI
Sbjct: 151 QTTAILKQNYGGDIPSTVEDLVKLPGVGPKMAHLAMNIAWNSVTGIA------------- 197
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLW 327
VD HVHRI++RL W K + PE+TR LE WLP LW
Sbjct: 198 ----------------------VDTHVHRITNRLKWVKKETRYPEETRVALEDWLPRDLW 235
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
E+N LLVGFGQQ C P C+ CLN+D+CP K+
Sbjct: 236 REINWLLVGFGQQTCLPVNPRCKECLNQDICPAAKR 271
>gi|348536721|ref|XP_003455844.1| PREDICTED: endonuclease III-like protein 1-like [Oreochromis
niloticus]
Length = 419
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 163/264 (61%), Gaps = 36/264 (13%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K WEPA W++ L IREMR DAPVD MG + +++ VRR+ VL+SLMLSSQT
Sbjct: 130 KTEHWEPADWRKQLGFIREMRSSRDAPVDNMGAEKCYDIEAPAHVRRFQVLVSLMLSSQT 189
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AAM +L+ HG T+ENI T ++ LGKLI PVGFW+ K K++K+ S +L+K +
Sbjct: 190 KDQVTAAAMQKLRAHGCTVENILATDDEKLGKLIYPVGFWRNKVKYLKLTSAMLQKEFGG 249
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
DIPN++E L +LPGVGPKMAHL M+ AW V+GIG
Sbjct: 250 DIPNSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIG------------------------- 284
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRIS+RLGW K K PE+TRK LE WLP LWSE+N LLVGFGQ
Sbjct: 285 ----------VDTHVHRISNRLGWLRKATKNPEETRKALEEWLPRELWSEINWLLVGFGQ 334
Query: 340 QICKSQRPSCETCLNKDLCPQGKK 363
Q+C P C CLN+ CP K
Sbjct: 335 QVCLPVNPLCSVCLNQHSCPSAHK 358
>gi|348584800|ref|XP_003478160.1| PREDICTED: endonuclease III-like protein 1-like [Cavia porcellus]
Length = 309
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/261 (49%), Positives = 161/261 (61%), Gaps = 36/261 (13%)
Query: 103 TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
T WEP W++ L NIR MR DAPVD +G +H + P+V+RY +L++LMLSSQTKD
Sbjct: 82 TVWEPQEWQQQLTNIRIMRSKKDAPVDHLGAEHCCDPSAPPKVQRYQILLALMLSSQTKD 141
Query: 163 EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
+V AM RL GLT+++I T ++ LGKLI PVGFW++K K IK S ILK+ YN DI
Sbjct: 142 QVTAGAMQRLLAQGLTVDSILQTDDNTLGKLIYPVGFWRSKVKFIKQTSAILKQRYNGDI 201
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P ++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 202 PASLAELVALPGVGPKMAHLAMAVAWGTVSGIA--------------------------- 234
Query: 283 EKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VD HVHRI++RL WTK + K+PE+TR LE WLP LWSE+N LLVGFGQQI
Sbjct: 235 --------VDTHVHRIANRLKWTKRMTKSPEETRAALEEWLPRQLWSEINGLLVGFGQQI 286
Query: 342 CKSQRPSCETCLNKDLCPQGK 362
C P C+TCLN+ LCP +
Sbjct: 287 CLPTHPRCQTCLNQALCPSAQ 307
>gi|156354363|ref|XP_001623365.1| predicted protein [Nematostella vectensis]
gi|156210057|gb|EDO31265.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/256 (51%), Positives = 166/256 (64%), Gaps = 36/256 (14%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP +W++ L NIR+MR DAPVD+ G + +A+ P+V RY VL+SLMLSSQTKD V
Sbjct: 1 WEPPNWRQQLENIRQMRASRDAPVDSQGCERTADTSTTPQVYRYQVLVSLMLSSQTKDPV 60
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AAM +LK HG T++ I NTS+D LG++I PVGFW+ K +IK A++I K Y DIP
Sbjct: 61 TFAAMEKLKAHGCTVDKILNTSDDKLGEMIYPVGFWRKKVDYIKKATNICKAQYQGDIPC 120
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
TI L +LPGVGPKMAH+CM+ AWG +TGIG
Sbjct: 121 TISELVELPGVGPKMAHICMSVAWGQLTGIG----------------------------- 151
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI +RLGWT K KTPE++R +E+WLP WSE+N LLVGFGQQIC
Sbjct: 152 ------VDTHVHRICNRLGWTKKPTKTPEESRLAVEAWLPREEWSELNVLLVGFGQQICL 205
Query: 344 SQRPSCETCLNKDLCP 359
P+C++CLN+D+CP
Sbjct: 206 PVGPNCQSCLNRDICP 221
>gi|380012945|ref|XP_003690533.1| PREDICTED: endonuclease III-like protein 1-like [Apis florea]
Length = 363
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 166/260 (63%), Gaps = 36/260 (13%)
Query: 104 KWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
KWEP++W+ ++ NI+EMRK+ APVD MG + +V RY L++LMLSSQTKD+
Sbjct: 129 KWEPSNWETIVENIKEMRKYKTAPVDEMGCHKCTDPKATAKVARYQSLLALMLSSQTKDQ 188
Query: 164 VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
V HAAM RL +G T E I T +D LGKLI PVGFWK K ++IK ++IL Y++DIP
Sbjct: 189 VTHAAMQRLITYGCTPEIIAGTPDDTLGKLIYPVGFWKRKVEYIKKTTNILIDKYDSDIP 248
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC+L GVGPKMAH+CM AWG V+GIG
Sbjct: 249 KTLKELCQLSGVGPKMAHICMQIAWGEVSGIG---------------------------- 280
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VD HVHRI +RLGW K KTPEDTR +E WLP++LWSE+N+LLVGFGQ+IC
Sbjct: 281 -------VDTHVHRICNRLGWVKKPTKTPEDTRIAVEEWLPKNLWSEINYLLVGFGQEIC 333
Query: 343 KSQRPSCETCLNKDLCPQGK 362
+ P C+ CLNKD+CP K
Sbjct: 334 LPRFPKCDECLNKDICPFTK 353
>gi|405957861|gb|EKC24039.1| Endonuclease III-like protein 1 [Crassostrea gigas]
Length = 259
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/278 (49%), Positives = 169/278 (60%), Gaps = 46/278 (16%)
Query: 86 QNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEV 145
QNV + P+ WEP W+E L NI MRK +A VD+MG D ++ +PEV
Sbjct: 6 QNVKQEPPV----------WEPPMWREQLKNIYNMRKFRNAAVDSMGCDVISDTLASPEV 55
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
RY VL+SLMLSSQTKD++ AAM +L+EHG +I+NI TS+ LG+LI PVGFWK K +
Sbjct: 56 FRYQVLLSLMLSSQTKDQITSAAMEKLREHGCSIDNILQTSDKELGELIYPVGFWKKKVE 115
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+IK S IL++ YN DIP+T+E LCKLPGVGPKMA+L M AW + GIG
Sbjct: 116 YIKRTSKILQEEYNGDIPDTVEKLCKLPGVGPKMAYLVMKCAWNQIVGIG---------- 165
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPE 324
VD HVHRIS+RLGW K K PEDTRKEL+ WLP
Sbjct: 166 -------------------------VDTHVHRISNRLGWVKKPTKQPEDTRKELQDWLPR 200
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W +++ LLVGFGQQ C P C CLNK++CP GK
Sbjct: 201 EYWRDIDELLVGFGQQTCLPVGPKCYECLNKEICPVGK 238
>gi|410917257|ref|XP_003972103.1| PREDICTED: endonuclease III-like protein 1-like [Takifugu rubripes]
Length = 357
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 132/264 (50%), Positives = 162/264 (61%), Gaps = 36/264 (13%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K WEP WK L NIR MR DAPVD MG D + D V+R+ VL+SLMLSSQT
Sbjct: 96 KTEPWEPPRWKTQLENIRAMRSGRDAPVDNMGADKCHDADAPAHVKRFQVLVSLMLSSQT 155
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AAM +L+ HG T+ENI T+++ LG+LI PVGFW+ K K++K+ S +L+K +
Sbjct: 156 KDQVTSAAMQKLRAHGCTVENILATNDETLGQLIYPVGFWRNKVKYLKLTSAMLQKEFGG 215
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
DIP+++E L +LPGVGPKMAHL M+ AW V+GIG
Sbjct: 216 DIPDSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIG------------------------- 250
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRIS+RLGW K KTPE+TRK LE WLP LWSE+N LLVGFGQ
Sbjct: 251 ----------VDTHVHRISNRLGWLKKPTKTPEETRKSLEEWLPRELWSEINWLLVGFGQ 300
Query: 340 QICKSQRPSCETCLNKDLCPQGKK 363
Q+C P C CLN+ CP K
Sbjct: 301 QVCLPVSPLCSVCLNQHDCPSAHK 324
>gi|328777513|ref|XP_623602.3| PREDICTED: endonuclease III-like protein 1-like [Apis mellifera]
Length = 354
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 164/260 (63%), Gaps = 36/260 (13%)
Query: 104 KWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
KWEP++W+ ++ NI+EMRK+ APVD MG + +V RY LI+LMLSSQTKD+
Sbjct: 120 KWEPSNWETIVENIKEMRKYKTAPVDEMGCHKCTDPKATAKVARYQSLIALMLSSQTKDQ 179
Query: 164 VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
V HAAM RL +G T E I T +D LGKLI PVGFWK K ++IK + IL Y++DIP
Sbjct: 180 VTHAAMQRLITYGCTPEIIAGTPDDTLGKLIYPVGFWKRKVEYIKKTTTILIDKYDSDIP 239
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC+L GVGPKMAH+CM AWG V+GIG
Sbjct: 240 KTLKELCQLSGVGPKMAHICMQIAWGEVSGIG---------------------------- 271
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VD HVHRI +RLGW K KTPEDTR +E WLP +LWSE+N+LLVGFGQ+IC
Sbjct: 272 -------VDTHVHRICNRLGWVKKPTKTPEDTRIAVEEWLPRNLWSEINYLLVGFGQEIC 324
Query: 343 KSQRPSCETCLNKDLCPQGK 362
+ P C+ CLNKD+CP K
Sbjct: 325 LPRFPKCDECLNKDICPFTK 344
>gi|410985533|ref|XP_003999075.1| PREDICTED: endonuclease III-like protein 1 [Felis catus]
Length = 323
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 162/271 (59%), Gaps = 39/271 (14%)
Query: 96 DENDTKKTK---WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLI 152
+E D K+ + WEP W++ L NIR MR DAPVD +G +H + D P+VRRY VL+
Sbjct: 86 EEEDPKRPRVPSWEPRDWRQQLLNIRTMRSGKDAPVDWLGVEHCYDSDAPPKVRRYQVLL 145
Query: 153 SLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
SLMLSSQTKD+V AM RL+ GLT+++I T + LG LI PVGFW++K K+IK S
Sbjct: 146 SLMLSSQTKDQVTAGAMQRLRARGLTVDSILQTDDSTLGTLIYPVGFWRSKVKYIKQTSA 205
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL++ Y DIP+++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 206 ILQQRYGGDIPDSVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------ 247
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK-TPEDTRKELESWLPESLWSEVN 331
VD HVHRI++RLGWTK +PE TR LE WLP LW E+N
Sbjct: 248 -----------------AVDTHVHRIANRLGWTKTATNSPEKTRAALEEWLPRELWGEIN 290
Query: 332 HLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
LLVGFGQQ C P C+ CLN+ LCP +
Sbjct: 291 GLLVGFGQQTCLPVHPRCQGCLNRTLCPAAR 321
>gi|427783639|gb|JAA57271.1| Putative endonuclease iii [Rhipicephalus pulchellus]
Length = 306
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 160/260 (61%), Gaps = 36/260 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W P +WKEVL NIR+MR+ +APVD MG D + + ++ RY +L+SLMLSSQTKDEV
Sbjct: 77 WTPENWKEVLENIRKMRRTIEAPVDTMGCDKCPDQSVPQKLVRYQLLVSLMLSSQTKDEV 136
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
HAA+GRL+E LT E+I E + LI PV F+K KAKH+K + +L + Y+ DIP+
Sbjct: 137 THAAVGRLREFALTPESIARADEKQIELLIYPVSFYKNKAKHLKQTAKVLLEKYDGDIPD 196
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++E LC LPGVGPKMA+L M+ WG GIG
Sbjct: 197 SVEGLCSLPGVGPKMAYLAMSCGWGRTVGIG----------------------------- 227
Query: 285 KIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+RLGW KTPE TRK LE+WLP LW EVNHLLVGFGQ +CK
Sbjct: 228 ------VDTHVHRISNRLGWLPAPTKTPEQTRKALEAWLPRELWDEVNHLLVGFGQTVCK 281
Query: 344 SQRPSCETCLNKDLCPQGKK 363
P C +CLN LCP GKK
Sbjct: 282 PAGPKCSSCLNVQLCPFGKK 301
>gi|427777899|gb|JAA54401.1| Putative endonuclease iii [Rhipicephalus pulchellus]
Length = 321
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/260 (50%), Positives = 160/260 (61%), Gaps = 36/260 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W P +WKEVL NIR+MR+ +APVD MG D + + ++ RY +L+SLMLSSQTKDEV
Sbjct: 92 WTPENWKEVLENIRKMRRTIEAPVDTMGCDKCPDQSVPQKLVRYQLLVSLMLSSQTKDEV 151
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
HAA+GRL+E LT E+I E + LI PV F+K KAKH+K + +L + Y+ DIP+
Sbjct: 152 THAAVGRLREFALTPESIARADEKQIELLIYPVSFYKNKAKHLKQTAKVLLEKYDGDIPD 211
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++E LC LPGVGPKMA+L M+ WG GIG
Sbjct: 212 SVEGLCSLPGVGPKMAYLAMSCGWGRTVGIG----------------------------- 242
Query: 285 KIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+RLGW KTPE TRK LE+WLP LW EVNHLLVGFGQ +CK
Sbjct: 243 ------VDTHVHRISNRLGWLPAPTKTPEQTRKALEAWLPRELWDEVNHLLVGFGQTVCK 296
Query: 344 SQRPSCETCLNKDLCPQGKK 363
P C +CLN LCP GKK
Sbjct: 297 PAGPKCSSCLNVQLCPFGKK 316
>gi|311251810|ref|XP_003124777.1| PREDICTED: endonuclease III-like protein 1-like [Sus scrofa]
Length = 312
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 155/259 (59%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPPDWRKQLENIRAMRSGRDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ HGLT+++I + LG LI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAHGLTVDSILQMDDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVPELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI+ RL WT K K+PE TR LE WLP LWSE+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIAGRLKWTKKATKSPEKTRTALEEWLPRELWSEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNRALCPAAQ 310
>gi|380790641|gb|AFE67196.1| endonuclease III-like protein 1 [Macaca mulatta]
Length = 312
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRSEKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|109127234|ref|XP_001082772.1| PREDICTED: nth endonuclease III-like 1 [Macaca mulatta]
Length = 312
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRSEKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|383858638|ref|XP_003704806.1| PREDICTED: endonuclease III-like protein 1-like [Megachile
rotundata]
Length = 394
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/313 (45%), Positives = 191/313 (61%), Gaps = 41/313 (13%)
Query: 56 DKEHNDNKTQNKKNTLYKSEKLGKRTL----LKKQNVHNKDPIPDENDTKKTKWEPAHWK 111
D + ND K ++ K+ + K E + + +K ++V + + I E+ ++ W P +W+
Sbjct: 112 DIQSNDIKLEDVKHEIIKKENTQEVDVQSNDIKLEDVKH-EIIKKESTQEENIWMPQNWE 170
Query: 112 EVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
VLNN++EMRKH APVD MG A+ + +V R+ L++LMLSSQTKD+V HAAM R
Sbjct: 171 IVLNNVKEMRKHRTAPVDEMGCHKCADPKASAKVIRFQSLVALMLSSQTKDQVTHAAMQR 230
Query: 172 LKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCK 231
L +G T E + +T +DVLGKLI PVGFWK K +IK + IL Y++DIP T++ LC+
Sbjct: 231 LNAYGCTPEMLRDTPDDVLGKLIYPVGFWKRKVIYIKKTAGILIDKYDSDIPRTLKELCE 290
Query: 232 LPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCV 291
LPGVGPKM+H+CM AWG V+GIG V
Sbjct: 291 LPGVGPKMSHICMQIAWGEVSGIG-----------------------------------V 315
Query: 292 DVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
D HVHRI +R+GW K KTPE TR +E WLP++LWSEVNHLLVGFGQ+IC + P C
Sbjct: 316 DTHVHRICNRMGWVKKPTKTPEQTRTAVEEWLPKNLWSEVNHLLVGFGQEICLPRFPKCN 375
Query: 351 TCLNKDLCPQGKK 363
CLN+++CP K
Sbjct: 376 ECLNRNICPFSTK 388
>gi|118601744|ref|NP_001073043.1| endonuclease III-like protein 1 [Gallus gallus]
gi|118341820|dbj|BAF37123.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 166/277 (59%), Gaps = 39/277 (14%)
Query: 88 VHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR 147
+ +P P+ + KWEP +W++ L IREMR+H DAPVD MG D + P+V R
Sbjct: 42 AYEAEPKPE---SPGPKWEPENWQQQLERIREMRRHRDAPVDEMGVDKCYDTSAPPQVMR 98
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+SLMLSSQTKD+V AAM RL++ GLT+++I + LG++I PVGFW+ K K+I
Sbjct: 99 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 158
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + ILK+ Y DIP T+E L KLPGVGPKMAHL MN AW V+GI
Sbjct: 159 KQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIA------------ 206
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
VD HVHRI++RL W K + PE+TR LE WLP L
Sbjct: 207 -----------------------VDTHVHRITNRLKWVKKETRYPEETRVALEDWLPRDL 243
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W E+N LLVGFGQQ C P C+ CLN+D+CP K+
Sbjct: 244 WREINWLLVGFGQQTCLPVNPRCKECLNQDICPAAKR 280
>gi|194219367|ref|XP_001915373.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Equus caballus]
Length = 312
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWRQQLANIRTMRSGKDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW+ K K+IK S IL++ Y+ DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDSTLGMLIYPVGFWRNKVKYIKQTSAILQQRYDGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKTTKSPEETRTALEEWLPRELWREINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNRALCPAAQ 310
>gi|156563964|dbj|BAF76070.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 166/277 (59%), Gaps = 39/277 (14%)
Query: 88 VHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR 147
+ +P P+ + KWEP +W++ L IREMR+H DAPVD MG D + P+V R
Sbjct: 42 AYEAEPKPE---SPGPKWEPENWQQQLERIREMRRHRDAPVDEMGVDKCYDTSAPPQVMR 98
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+SLMLSSQTKD+V AAM RL++ GLT+++I + LG++I PVGFW+ K K+I
Sbjct: 99 YQVLLSLMLSSQTKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYI 158
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + ILK+ Y DIP T+E L KLPGVGPKMAHL MN AW V+GI
Sbjct: 159 KQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMNIAWNSVSGIA------------ 206
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
VD HVHRI++RL W K + PE+TR LE WLP L
Sbjct: 207 -----------------------VDTHVHRITNRLKWVKKETRYPEETRVALEDWLPRDL 243
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W E+N LLVGFGQQ C P C+ CLN+D+CP K+
Sbjct: 244 WREINWLLVGFGQQTCLPVNPRCKECLNQDICPTAKR 280
>gi|383413091|gb|AFH29759.1| endonuclease III-like protein 1 [Macaca mulatta]
Length = 312
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRSEKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|402907295|ref|XP_003916412.1| PREDICTED: endonuclease III-like protein 1 [Papio anubis]
Length = 312
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRSKKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|297697807|ref|XP_002826033.1| PREDICTED: endonuclease III-like protein 1 [Pongo abelii]
Length = 312
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQGWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|397472431|ref|XP_003807747.1| PREDICTED: endonuclease III-like protein 1 [Pan paniscus]
Length = 312
Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 158/259 (61%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C TCLN+ LCP +
Sbjct: 292 PVRPRCHTCLNQALCPAAQ 310
>gi|395835757|ref|XP_003790839.1| PREDICTED: endonuclease III-like protein 1 [Otolemur garnettii]
Length = 312
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRTMRSKKDAPVDQLGAEHCYDPCAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG+LI PVGFW+ K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDSTLGELIYPVGFWRNKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M WGIV+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVGWGIVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RLGWT K K+PE+TR LE WLP LWSE+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLGWTKKATKSPEETRGALEEWLPRELWSEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C TCLN LCP +
Sbjct: 292 PLHPRCPTCLNYALCPAAQ 310
>gi|444727310|gb|ELW67811.1| Endonuclease III-like protein 1 [Tupaia chinensis]
Length = 258
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP +W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQT+D+V
Sbjct: 33 WEPQNWQQQLANIRAMRSKKDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTRDQV 92
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GL+ + I +D LG+LI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 93 TAGAMQRLRARGLSADTILQMDDDTLGELIYPVGFWRSKVKYIKQTSAILQQRYAGDIPA 152
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 153 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 182
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE TR LE WLP LWSE+N LLVGFGQQ C
Sbjct: 183 -----AVDTHVHRIANRLKWTKKTTKSPEATRVALEEWLPRGLWSEINGLLVGFGQQTCL 237
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C TCLN+ LCP +
Sbjct: 238 PARPRCHTCLNQTLCPAAQ 256
>gi|443717727|gb|ELU08655.1| hypothetical protein CAPTEDRAFT_25579, partial [Capitella teleta]
Length = 231
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 170/269 (63%), Gaps = 42/269 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W+E L NI+EMR+ DAPVD MG D + +P+ RY +L+SLMLSSQT+D+V
Sbjct: 5 PSNWEEQLANIQEMRRKKDAPVDTMGCDVITDQKASPQEYRYQILLSLMLSSQTRDQVTS 64
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM +L++HG +I++I TS++ LG+LI P GFWK K ++IK S ILK +++ DIPNT+
Sbjct: 65 AAMMKLRQHGCSIDSILATSDEKLGELIYPAGFWKRKVEYIKKTSKILKSDFSMDIPNTV 124
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E LC LPGVGPKMAHL M AWG ++GIG
Sbjct: 125 EGLCSLPGVGPKMAHLVMKSAWGEISGIG------------------------------- 153
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRI +RL W K K PE+TR ELE WLP LW ++N LLVGFGQ IC+
Sbjct: 154 ----VDTHVHRICNRLDWVKT-KQPEETRVELEEWLPRDLWVDINALLVGFGQTICRPVG 208
Query: 347 PSCETCLNKDLCPQGKKELAERVKKSPKK 375
P C +CLNK++CP GK + KSPKK
Sbjct: 209 PDCFSCLNKNICPVGKTQ------KSPKK 231
>gi|355709857|gb|EHH31321.1| Endonuclease III-like protein 1, partial [Macaca mulatta]
Length = 280
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 157/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 55 WEPQDWQQQLVNIRAMRSEKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 114
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 115 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 174
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 175 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 205
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 206 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 259
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 260 PVRPRCQACLNQALCPAAQ 278
>gi|332240056|ref|XP_003269206.1| PREDICTED: endonuclease III-like protein 1 [Nomascus leucogenys]
Length = 312
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRNKKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW+ K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRIKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGSVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRVALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 292 PVRPRCQACLNQALCPAAQ 310
>gi|426380776|ref|XP_004057037.1| PREDICTED: endonuclease III-like protein 1 [Gorilla gorilla
gorilla]
Length = 312
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 237
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 238 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C CLN+ LCP +
Sbjct: 292 PVRPRCHACLNQALCPAAQ 310
>gi|403273321|ref|XP_003928467.1| PREDICTED: endonuclease III-like protein 1 [Saimiri boliviensis
boliviensis]
Length = 304
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 79 WEPQDWQQQLANIRAMRSKKDAPVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 138
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 139 TAGAMQRLRAQGLTVDSILQTDDTTLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 198
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 199 SVAELMALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 228
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 229 -----AVDTHVHRITNRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 283
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C+ CLN+ LCP +
Sbjct: 284 PVHPRCQGCLNQALCPAAQ 302
>gi|1772974|emb|CAA70865.1| endonuclease III homologue 1 [Homo sapiens]
Length = 303
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 78 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 137
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 138 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 197
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 198 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 227
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 228 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 282
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C CLN+ LCP +
Sbjct: 283 PVHPRCHACLNQALCPAAQ 301
>gi|1753174|gb|AAC51136.1| endonuclease III [Homo sapiens]
gi|1881376|dbj|BAA19413.1| endonuclease III homolog [Homo sapiens]
gi|3550834|dbj|BAA32695.1| NTHL1/NTH1 [Homo sapiens]
gi|12804311|gb|AAH03014.1| NTHL1 protein [Homo sapiens]
Length = 304
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 79 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 138
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 139 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 198
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 199 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 228
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 229 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 283
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C CLN+ LCP +
Sbjct: 284 PVHPRCHACLNQALCPAAQ 302
>gi|38197140|gb|AAH00391.2| NTHL1 protein, partial [Homo sapiens]
Length = 305
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 80 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 139
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 140 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 199
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 200 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 229
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 230 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 284
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C CLN+ LCP +
Sbjct: 285 PVHPRCHACLNQALCPAAQ 303
>gi|4505471|ref|NP_002519.1| endonuclease III-like protein 1 [Homo sapiens]
gi|29840795|sp|P78549.2|NTHL1_HUMAN RecName: Full=Endonuclease III-like protein 1
gi|20136744|gb|AAM11786.1|AF498098_1 nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|3522921|gb|AAC34209.1| hNTH1 [Homo sapiens]
gi|119605968|gb|EAW85562.1| nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|261860536|dbj|BAI46790.1| nth endonuclease III-like protein 1 [synthetic construct]
gi|311350018|gb|ADP92214.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350020|gb|ADP92215.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350022|gb|ADP92216.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350024|gb|ADP92217.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350026|gb|ADP92218.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350028|gb|ADP92219.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350030|gb|ADP92220.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350032|gb|ADP92221.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350034|gb|ADP92222.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350036|gb|ADP92223.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350038|gb|ADP92224.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350040|gb|ADP92225.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350042|gb|ADP92226.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350044|gb|ADP92227.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350046|gb|ADP92228.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350048|gb|ADP92229.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350050|gb|ADP92230.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350052|gb|ADP92231.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350054|gb|ADP92232.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350056|gb|ADP92233.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350058|gb|ADP92234.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350060|gb|ADP92235.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350062|gb|ADP92236.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350064|gb|ADP92237.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350066|gb|ADP92238.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350068|gb|ADP92239.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350070|gb|ADP92240.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350072|gb|ADP92241.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350074|gb|ADP92242.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350076|gb|ADP92243.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350078|gb|ADP92244.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350080|gb|ADP92245.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350082|gb|ADP92246.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350084|gb|ADP92247.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350086|gb|ADP92248.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350088|gb|ADP92249.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350090|gb|ADP92250.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350092|gb|ADP92251.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350094|gb|ADP92252.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350096|gb|ADP92253.1| endonuclease III-like protein 1 [Homo sapiens]
Length = 312
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/259 (49%), Positives = 156/259 (60%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 147 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C CLN+ LCP +
Sbjct: 292 PVHPRCHACLNQALCPAAQ 310
>gi|351711290|gb|EHB14209.1| Endonuclease III-like protein 1 [Heterocephalus glaber]
Length = 298
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 181/329 (55%), Gaps = 41/329 (12%)
Query: 39 QTRCQLEKNIALNNPLDDKEHNDNKTQ----NKKNTLYKSEKLGKRTLLKKQNVHNKDPI 94
QTR +A ++ D+ +Q K + K ++ +R + ++ H +
Sbjct: 4 QTRISSGTGMAGERLYSGEQAGDDASQAAESRKSHRPVKRQRKAQRLHVAYEDSHGEKSE 63
Query: 95 PDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISL 154
E T WEP W + L NIR MR DAPVD +G +H + P+V+RY VL++L
Sbjct: 64 GAE-PLAVTVWEPQDWCQQLANIRTMRNRKDAPVDQLGAEHCCDPSAPPKVQRYQVLLAL 122
Query: 155 MLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL 214
MLSSQTKD+V AM RL+ GLT+ I T ++ LGKLI PVGFW++K K IK S IL
Sbjct: 123 MLSSQTKDQVTAGAMQRLRAQGLTVNRILQTDDNTLGKLIYPVGFWRSKVKFIKQTSAIL 182
Query: 215 KKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRS 274
++ Y+ DIP ++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 183 QQRYDGDIPASLAELVALPGVGPKMAHLAMAVAWGTVSGIA------------------- 223
Query: 275 ELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHL 333
VD HVHRI++RL WT ++ K+PE+TR LE WLP LW E+N L
Sbjct: 224 ----------------VDTHVHRIANRLRWTRRMTKSPEETRAALEEWLPRELWHEINGL 267
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQGK 362
LVGFGQQIC P C+ CLN+ LCP +
Sbjct: 268 LVGFGQQICLPIHPRCQACLNQALCPAAQ 296
>gi|449273757|gb|EMC83166.1| Endonuclease III-like protein 1, partial [Columba livia]
Length = 256
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 160/266 (60%), Gaps = 36/266 (13%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSS 158
+ ++ +WEP W++ L IREMR++ DAPVD MG + + P+V RY VL+SLMLSS
Sbjct: 25 EPQRLRWEPQDWRQQLERIREMRRNRDAPVDEMGVEKCYDSSAPPQVMRYQVLLSLMLSS 84
Query: 159 QTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
QTKD+V AAM RL++HGLTI+ I + LG++I PVGFW+ K K+IK + ILK+ Y
Sbjct: 85 QTKDQVTSAAMLRLRQHGLTIDRILQMDDATLGQMIYPVGFWRNKVKYIKQTTAILKQKY 144
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELIC 278
DIP T+E L +LPGVGPKMAHL M AW V+GI
Sbjct: 145 GGDIPRTVEELVQLPGVGPKMAHLAMTIAWDSVSGIA----------------------- 181
Query: 279 VRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGF 337
VD HVHRI++RL W K + PE+TR LE WLP LW E+N LLVGF
Sbjct: 182 ------------VDTHVHRITNRLKWVKKETRHPEETRVALEDWLPRDLWREINWLLVGF 229
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKK 363
GQQ C P C CLN+DLCP K+
Sbjct: 230 GQQTCLPVNPRCNECLNRDLCPAAKR 255
>gi|241682023|ref|XP_002401078.1| endonuclease, putative [Ixodes scapularis]
gi|215504370|gb|EEC13864.1| endonuclease, putative [Ixodes scapularis]
Length = 326
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 163/262 (62%), Gaps = 36/262 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W+P +W++VL+NIR+MR+ +APVD MG D + + ++ RY +L+SLMLSSQTKDEV
Sbjct: 93 WKPDNWEQVLSNIRQMRQEREAPVDTMGCDKCPDQTLPEKLVRYQLLVSLMLSSQTKDEV 152
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
HAA+GRL++ GLT E + E L +LI PV F+K KAKH+K S +L Y+ DIP+
Sbjct: 153 THAAVGRLRDFGLTPEVVSAAEEKQLEELIYPVSFYKNKAKHLKRTSQVLLDEYDGDIPD 212
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
+IE LCKLPGVGPKM++L M+ W GIG
Sbjct: 213 SIEGLCKLPGVGPKMSYLAMSCGWKRTVGIG----------------------------- 243
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+ LGW + KTPE TRK LE+WLP LW EVN LLVGFGQ +CK
Sbjct: 244 ------VDTHVHRISNWLGWLPQATKTPEQTRKALEAWLPRDLWDEVNLLLVGFGQTVCK 297
Query: 344 SQRPSCETCLNKDLCPQGKKEL 365
P C +CLN LCP G+K++
Sbjct: 298 PVAPKCSSCLNLQLCPYGRKQV 319
>gi|347967756|ref|XP_312566.5| AGAP002388-PA [Anopheles gambiae str. PEST]
gi|333468315|gb|EAA08063.5| AGAP002388-PA [Anopheles gambiae str. PEST]
Length = 461
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/269 (49%), Positives = 158/269 (58%), Gaps = 40/269 (14%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDH----SANVDIAPEVRRYHVL 151
D K++KWEP +W++++ NIREMRK APVD MG D ++ V+RYH L
Sbjct: 205 DSTVAKESKWEPENWRQMMENIREMRKAHLAPVDTMGCDQFTQDPGATEVPDRVKRYHCL 264
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
+SL+LSSQTKD+ NH M RLK+HGLT E+I T VL KLI PVGF+K K + IK S
Sbjct: 265 VSLILSSQTKDKANHECMLRLKKHGLTPESIVATDSAVLQKLIYPVGFYKNKTRFIKEMS 324
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
IL Y DIPN+IE L KLPGVG KMAHLCM AW IVTGIG
Sbjct: 325 QILIDQYGGDIPNSIEGLLKLPGVGTKMAHLCMRSAWNIVTGIG---------------- 368
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEV 330
VD HVHRI++ L W K K PE+TR+ LE WLP LW EV
Sbjct: 369 -------------------VDTHVHRIANWLKWVPKETKNPENTRQALEKWLPYELWDEV 409
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCP 359
NHLLVGFGQ IC + P C C N +CP
Sbjct: 410 NHLLVGFGQTICTPRFPRCNDCSNAPICP 438
>gi|449682785|ref|XP_002164144.2| PREDICTED: endonuclease III-like protein 1-like [Hydra
magnipapillata]
Length = 320
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/259 (50%), Positives = 161/259 (62%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ +LNNI+EMRK +A VD+ G + +A+ +PEV+RY LISLMLSSQTKD V
Sbjct: 97 PTNWEVMLNNIKEMRKSRNAIVDSYGCERTADERESPEVKRYQTLISLMLSSQTKDGVTF 156
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM RLK+HGLTI +I TSE V+ +LI PVGFWK KA IK A+ I +NNDIPN++
Sbjct: 157 AAMDRLKKHGLTIPSIFETSESVIEELIYPVGFWKKKAAFIKNATAICHDKFNNDIPNSL 216
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
+ L LPGVGPKMAH+CMN AWG+VTGIG
Sbjct: 217 QGLLSLPGVGPKMAHICMNAAWGVVTGIG------------------------------- 245
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRI++RL W K PE+TR LE+ LP W ++N LLVGFGQQ C
Sbjct: 246 ----VDTHVHRIANRLKWVNT-KKPEETRNCLEALLPRCEWDDINILLVGFGQQTCLPVN 300
Query: 347 PSCETCLNKDLCPQGKKEL 365
P C +CLN D+CP K +
Sbjct: 301 PKCISCLNYDICPSSTKNI 319
>gi|344292206|ref|XP_003417819.1| PREDICTED: endonuclease III-like protein 1-like [Loxodonta
africana]
Length = 314
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/259 (48%), Positives = 155/259 (59%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+V+RY VL+SLMLSSQTKD+V
Sbjct: 89 WEPQDWRQQLANIRTMRSRRDAPVDQLGAEHCYDPSAPPKVQRYQVLVSLMLSSQTKDQV 148
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + +LG LI PVGFW++K K IK S IL++ Y DIP+
Sbjct: 149 TAGAMQRLRVWGLTVDSILRTDDSMLGTLIHPVGFWRSKVKFIKQTSAILQQRYGGDIPS 208
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 209 SVAELVALPGVGPKMAHLAMATAWGTVSGIA----------------------------- 239
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K PE TR LE WLP LW E+N LLVGFGQQIC
Sbjct: 240 ------VDTHVHRIANRLRWTKKQTKAPEQTRAALEEWLPRELWGEINTLLVGFGQQICL 293
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C+ CLN+ LCP +
Sbjct: 294 PLHPRCQNCLNQVLCPAAR 312
>gi|1800271|gb|AAB41534.1| endonuclease III homolog 1, hNTH1 [Homo sapiens]
Length = 312
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/259 (48%), Positives = 155/259 (59%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
A+ RL+ GL +++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 147 TAGAIQRLRARGLAVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WT K K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
P C CLN+ LCP +
Sbjct: 292 PVHPRCHACLNQALCPAAQ 310
>gi|432847899|ref|XP_004066205.1| PREDICTED: endonuclease III-like protein 1-like [Oryzias latipes]
Length = 416
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/264 (48%), Positives = 155/264 (58%), Gaps = 36/264 (13%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K WEP HWK+ L IR MR DAPVD MG + + VRR+ VL+SLMLSSQT
Sbjct: 136 KTEPWEPPHWKDQLACIRTMRSRRDAPVDQMGAEKCFDTKAPAHVRRFQVLVSLMLSSQT 195
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
+D+V AAM +L+ HG T NI T + LG LI PVGFW+ K K++K S IL++ +
Sbjct: 196 RDQVTAAAMQKLRAHGCTAGNILATDDHTLGTLIYPVGFWRNKVKYLKKTSAILQEQFGG 255
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
DIP+ +E L +LPGVGPKMAHL M+ AW V+GIG
Sbjct: 256 DIPSDVEGLVRLPGVGPKMAHLAMDIAWNQVSGIG------------------------- 290
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRIS+RLGW K KTPEDTR+ LE WLP LWS++N LLVGFGQ
Sbjct: 291 ----------VDTHVHRISNRLGWVRKPTKTPEDTRRALEEWLPRDLWSQINWLLVGFGQ 340
Query: 340 QICKSQRPSCETCLNKDLCPQGKK 363
Q+C P C CLN+ CP K
Sbjct: 341 QMCLPVGPLCSMCLNQHSCPSAHK 364
>gi|340374045|ref|XP_003385549.1| PREDICTED: endonuclease III-like protein 1-like [Amphimedon
queenslandica]
Length = 295
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/292 (46%), Positives = 172/292 (58%), Gaps = 48/292 (16%)
Query: 80 RTLLKKQNVHNKDPI----PDENDTKKT-------KWEPAHWKEVLNNIREMRKHGDAPV 128
+T+++K+ V + P+ P+E T WEP +W+E NI+ MR DAPV
Sbjct: 34 KTVIRKKRVSDPPPVKREKPEERHTGGQIREAGLPYWEPLNWREQFENIKIMRSSRDAPV 93
Query: 129 DAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSED 188
D +G S P V+R+ VL+SLMLSSQTKD V AM L+E+GLTIE + + +D
Sbjct: 94 DDVG-AASLPESKLPHVKRFEVLVSLMLSSQTKDGVTAKAMSNLQEYGLTIEGLIDIKQD 152
Query: 189 VLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAW 248
L +LI PVGF++ KA+++K + ILK+ +N DIP ++E L LPGVGPKMAHLCM+ AW
Sbjct: 153 KLEQLIFPVGFYRRKAQYLKKTAQILKEKHNGDIPESLEGLMALPGVGPKMAHLCMDIAW 212
Query: 249 GIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KV 307
G VTGIG VD HVHRI++RL W K
Sbjct: 213 GNVTGIG-----------------------------------VDTHVHRIANRLKWVKKP 237
Query: 308 FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
KTPEDTRK LE WLP+S WS N LLVGFGQQIC RP C CLNK +CP
Sbjct: 238 TKTPEDTRKGLEEWLPQSEWSSANLLLVGFGQQICLPLRPKCSECLNKSICP 289
>gi|170035458|ref|XP_001845586.1| endonuclease iii [Culex quinquefasciatus]
gi|167877498|gb|EDS40881.1| endonuclease iii [Culex quinquefasciatus]
Length = 363
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 183/329 (55%), Gaps = 56/329 (17%)
Query: 33 DEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKD 92
D+P ++ R K I + + D ++ +D + ++KS + KRT +K++ V
Sbjct: 66 DDPPEKKPRAPRRKPIKVESSPDRRQGDDPQVDV---VVHKSPR--KRTPIKEEWVEG-- 118
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSAN-VDIAPEVRRYHVL 151
WEP +W+ +L NIR MR APVD+MG D + V + P+ RR+H L
Sbjct: 119 ------------WEPVNWRPMLENIRRMRLERPAPVDSMGCDQFRDDVTVPPKTRRFHTL 166
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
+SLMLSSQTKD+ N M RL++HGLT E + T + L KLI PV F+K KAK I+ S
Sbjct: 167 VSLMLSSQTKDQANFECMQRLRKHGLTPEQMVATDVETLEKLIHPVSFYKNKAKFIRQTS 226
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
+L Y+ DIP+TIE L KLPGVG KMAHLCM AW IVTGIG
Sbjct: 227 ALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCMGAAWNIVTGIG---------------- 270
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEV 330
VD HVHRIS+ LGW + +TPE+TR LE WLP LW EV
Sbjct: 271 -------------------VDTHVHRISNWLGWVPRETRTPEETRLLLERWLPFELWEEV 311
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCP 359
NHLLVGFGQ IC S P C C N ++CP
Sbjct: 312 NHLLVGFGQTICTSTYPRCNECGNAEICP 340
>gi|170063194|ref|XP_001866998.1| endonuclease iii [Culex quinquefasciatus]
gi|167880905|gb|EDS44288.1| endonuclease iii [Culex quinquefasciatus]
Length = 361
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 183/329 (55%), Gaps = 56/329 (17%)
Query: 33 DEPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKD 92
D+P ++ R K I + + D ++ +D + ++KS + KRT +K++ V
Sbjct: 64 DDPPEKKPRAPRRKPIKVESSPDRRQGDDPQVDV---VVHKSPR--KRTPIKEEWVEG-- 116
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSAN-VDIAPEVRRYHVL 151
WEP +W+ +L NIR MR APVD+MG D + V + P+ RR+H L
Sbjct: 117 ------------WEPVNWRPMLENIRRMRLERPAPVDSMGCDQFRDDVTVPPKTRRFHTL 164
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
+SLMLSSQTKD+ N M RL++HGLT E + T + L KLI PV F+K KAK I+ S
Sbjct: 165 VSLMLSSQTKDQANFECMQRLRKHGLTPEQMVATDVERLEKLIHPVSFYKNKAKFIRQTS 224
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
+L Y+ DIP+TIE L KLPGVG KMAHLCM AW IVTGIG
Sbjct: 225 ALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCMGAAWNIVTGIG---------------- 268
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEV 330
VD HVHRIS+ LGW + +TPE+TR LE WLP LW EV
Sbjct: 269 -------------------VDTHVHRISNWLGWVPRETRTPEETRLLLERWLPFELWEEV 309
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCP 359
NHLLVGFGQ IC S P C C N ++CP
Sbjct: 310 NHLLVGFGQTICTSTYPRCNECGNAEICP 338
>gi|405957860|gb|EKC24038.1| Endonuclease III-like protein 1 [Crassostrea gigas]
Length = 372
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 155/244 (63%), Gaps = 36/244 (14%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTI 179
MRK +A VD+MG D ++ +PEV RY VL+SLMLSSQTKD++ AAM +L+EHG +I
Sbjct: 1 MRKSRNAAVDSMGCDVISDTLASPEVYRYQVLLSLMLSSQTKDQITSAAMKKLREHGCSI 60
Query: 180 ENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKM 239
+NI TS+ VLG+LI PVGFWK K ++IK S IL++ YN DIP+T+E LCKLPGVGPKM
Sbjct: 61 DNILETSDQVLGELIYPVGFWKKKIEYIKRTSKILQEEYNGDIPDTVEKLCKLPGVGPKM 120
Query: 240 AHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRIS 299
A+L M AW + GIG VD HVHRIS
Sbjct: 121 AYLAMKCAWNQIVGIG-----------------------------------VDTHVHRIS 145
Query: 300 HRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+RL W K K PEDTRKEL+ WLP W ++NHLLVGFGQQ C P C CLNK++C
Sbjct: 146 NRLRWVKKPTKQPEDTRKELQDWLPREYWRDINHLLVGFGQQTCLPVGPRCYECLNKEIC 205
Query: 359 PQGK 362
P GK
Sbjct: 206 PVGK 209
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 111/214 (51%), Gaps = 52/214 (24%)
Query: 163 EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVG-------------FWKTKAKHIKM 209
++NH +G ++ L + C + L K I PVG + K ++IK
Sbjct: 176 DINHLLVGFGQQTCLPVGPRCY---ECLNKEICPVGKTNKKIPSPKKIKKEEKKIEYIKR 232
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
S IL++ YN DIP+T+E LCKLPGVGPKMA+L M AW + GIG
Sbjct: 233 TSKILQEEYNGDIPDTVEKLCKLPGVGPKMAYLAMKCAWNQIVGIG-------------- 278
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWS 328
VD HVHRIS+RL W K K PEDTRKEL+ WLP W
Sbjct: 279 ---------------------VDTHVHRISNRLRWVKKPTKQPEDTRKELQDWLPREYWR 317
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
++NHLLVGFGQQ C P C CLNK++CP GK
Sbjct: 318 DINHLLVGFGQQTCLPVGPRCYECLNKEICPVGK 351
>gi|73959522|ref|XP_853674.1| PREDICTED: endonuclease III-like protein 1 [Canis lupus familiaris]
Length = 312
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/259 (46%), Positives = 149/259 (57%), Gaps = 36/259 (13%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+V+RY VL+SLMLSSQTKD+V
Sbjct: 87 WEPQDWRQQLENIRTMRSGKDAPVDWLGVEHCHDPSAPPKVQRYQVLLSLMLSSQTKDQV 146
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ HGLT+++I T + LG LI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 147 TAGAMQRLRAHGLTVDSILQTDDATLGSLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPA 206
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 207 SVAELVALPGVGPKMAHLAMAVAWGTVSGI------------------------------ 236
Query: 285 KIPQLCVDVHVHRISH-RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++ +PE TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 237 -----AVDTHVHRIANRLRWTRTTTTSPEKTRAALEEWLPRELWGEINGLLVGFGQQTCL 291
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C CLN+ LCP +
Sbjct: 292 PVRPRCGACLNRSLCPAAQ 310
>gi|56753569|gb|AAW24987.1| SJCHGC01733 protein [Schistosoma japonicum]
Length = 269
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/298 (45%), Positives = 172/298 (57%), Gaps = 40/298 (13%)
Query: 77 LGKRTLLKKQNVHNKDPIPDE--NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWD 134
+ KR L+K+ N I DE K KW P W+ LNNIR+MR+ DAPVD MG +
Sbjct: 1 MTKRVRLRKRISVND--IEDEVSGQVTKCKWTPLQWRTQLNNIRKMRESRDAPVDLMGCE 58
Query: 135 HSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI 194
A+ P+ R VLISLMLSSQTKD+V AAM RLK G T+ + + + L +LI
Sbjct: 59 KLADETEHPKTFRLQVLISLMLSSQTKDQVTAAAMERLKSKGCTLAMLTDMKTEDLEELI 118
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
PVGF+KTKA +IK +I+K+ Y++DIP T++ LC LPGVGPKMA+L M AW VTGI
Sbjct: 119 YPVGFYKTKALNIKKTCEIIKQKYDSDIPKTVKELCTLPGVGPKMAYLAMKCAWKKVTGI 178
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPED 313
G VD HVHRI++RL W+K KTPE+
Sbjct: 179 G-----------------------------------VDTHVHRITNRLKWSKRPTKTPEE 203
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKK 371
TR LE WLP W E+N LLVGFGQQIC+ P+C CLN+ +CP K + KK
Sbjct: 204 TRMALEEWLPREYWDEINLLLVGFGQQICRPVNPNCMGCLNRSICPSASKLTLKNYKK 261
>gi|195999308|ref|XP_002109522.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
gi|190587646|gb|EDV27688.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
Length = 292
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 161/268 (60%), Gaps = 42/268 (15%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGW----DHSANVDIAPEVRRYHVLISLML 156
+K WEP +W L NIREMRK DAPVD MG D S +V++ V+RY +LISLML
Sbjct: 60 EKPSWEPKNWHLQLQNIREMRKAKDAPVDTMGCSELSDRSESVEV--RVQRYQILISLML 117
Query: 157 SSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SSQTKD++ AAM RLK HGLT++N+ TS+ LG+LI PVGFW+ K ++IK + +L +
Sbjct: 118 SSQTKDQITAAAMHRLKNHGLTMDNVMATSDKQLGELIFPVGFWQRKVQYIKRTTAMLIE 177
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
YN DIP T++ L LPG+GPKMAHL M AW V GIG
Sbjct: 178 KYNKDIPPTLDELKALPGIGPKMAHLIMLSAWNSVVGIG--------------------- 216
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT-PEDTRKELESWLPESLWSEVNHLLV 335
VD HVHRIS+RL W K T PE TR LE WLP + W E+N L+V
Sbjct: 217 --------------VDTHVHRISNRLKWVKKPTTDPEKTRIALEEWLPRNEWREINCLMV 262
Query: 336 GFGQQICKSQRPSCETCLNKDLCPQGKK 363
GFGQ IC P C+ CLNK +CP GK+
Sbjct: 263 GFGQTICLPINPLCDNCLNKPICPYGKR 290
>gi|324511601|gb|ADY44825.1| Endonuclease III-like protein 1 [Ascaris suum]
Length = 266
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 154/262 (58%), Gaps = 36/262 (13%)
Query: 98 NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
++ K +E W+ L +++MR+ DAPVD MG +V +P+V R+ +L+SLMLS
Sbjct: 33 GNSVKDDYERPLWERHLERLQQMRESKDAPVDTMGCHMLGDVLASPQVYRFQILVSLMLS 92
Query: 158 SQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKN 217
SQTKD++ AAM RL+ G T+E I SE L L+IPVGF+K KA ++K +DIL
Sbjct: 93 SQTKDQITAAAMQRLRSRGCTVEGIIEMSELELQDLLIPVGFYKRKAIYLKKVADILSNK 152
Query: 218 YNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELI 277
Y DIPNT+E LC LPGVGPKMAHL M HAWG + G+G
Sbjct: 153 YGGDIPNTVEDLCSLPGVGPKMAHLAMQHAWGRIEGLG---------------------- 190
Query: 278 CVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGF 337
VD HVHRI++RLGW K KTPE TR LE +P+ W+ +N LLVGF
Sbjct: 191 -------------VDTHVHRIANRLGWVKT-KTPEQTRVALEELIPKERWAGLNKLLVGF 236
Query: 338 GQQICKSQRPSCETCLNKDLCP 359
GQQ C P C CLNKD+CP
Sbjct: 237 GQQTCLPTLPKCSDCLNKDICP 258
>gi|256071646|ref|XP_002572150.1| endonuclease III [Schistosoma mansoni]
gi|353229188|emb|CCD75359.1| putative endonuclease III [Schistosoma mansoni]
Length = 260
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 156/263 (59%), Gaps = 36/263 (13%)
Query: 102 KTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTK 161
K KWEP +W+ L+NIR+MR+ DAPVD+MG + A+ P+ R VLISLMLSSQTK
Sbjct: 25 KRKWEPLNWRVQLSNIRKMRESRDAPVDSMGCERLADETEHPKTFRLQVLISLMLSSQTK 84
Query: 162 DEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
D+V AAM RLK G T+ + + L LI PVGF+KTKA +IK +ILK+ YN+D
Sbjct: 85 DQVTSAAMERLKLRGCTLTTLTSMKTGELQDLIYPVGFYKTKALNIKKTCEILKEKYNSD 144
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRK 281
IP T+E LC LPGVGPKMA+L M AW VTGIG
Sbjct: 145 IPETVEELCTLPGVGPKMAYLAMQCAWKKVTGIG-------------------------- 178
Query: 282 CEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQ 340
VD HVHRI +RL W K KTPE+TR +E W P W E+N LLVGFGQQ
Sbjct: 179 ---------VDTHVHRIVNRLKWCKKPTKTPEETRLAIEEWFPREHWDEINWLLVGFGQQ 229
Query: 341 ICKSQRPSCETCLNKDLCPQGKK 363
IC+ P+C+ CLN +CP K
Sbjct: 230 ICRPVNPNCKECLNLSICPSASK 252
>gi|195115659|ref|XP_002002374.1| GI17349 [Drosophila mojavensis]
gi|193912949|gb|EDW11816.1| GI17349 [Drosophila mojavensis]
Length = 341
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/293 (44%), Positives = 165/293 (56%), Gaps = 42/293 (14%)
Query: 76 KLGKRTLLKKQNVHNKDPIPD--ENDTKKTKWEP----AHWKEVLNNIREMRKHGDAPVD 129
++GK T++K + V D +P+ K EP +W + L NIR MR APVD
Sbjct: 78 QMGKATIIKCEVVPECDKVPEIKAESATTVKIEPDFPNINWLQHLENIRLMRSEKPAPVD 137
Query: 130 AMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDV 189
MG A+ + + +R+H+L+ L+LSSQTKDE AM RLK LT + + +
Sbjct: 138 TMGCHKCADANANEKTQRFHILVGLILSSQTKDETTFEAMNRLKAQTLTPARLKDLPVEE 197
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
L +L+ PV F+K KAK++K S+IL YN DIPN I+ L KLPGVGPKMAH+CM AW
Sbjct: 198 LERLLHPVSFYKNKAKYLKQTSEILVDKYNEDIPNNIKELLKLPGVGPKMAHICMATAWQ 257
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVF 308
+TGIG VD HVHRI++RL W K
Sbjct: 258 EITGIG-----------------------------------VDTHVHRIANRLAWLKKPT 282
Query: 309 KTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
K PE TR +LESWLP LW+EVNHLLVGFGQ IC +P+C CLNKD+CP
Sbjct: 283 KEPEQTRIQLESWLPRPLWAEVNHLLVGFGQTICTPVKPNCSECLNKDICPAA 335
>gi|391340717|ref|XP_003744683.1| PREDICTED: endonuclease III-like protein 1-like [Metaseiulus
occidentalis]
Length = 340
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 166/281 (59%), Gaps = 37/281 (13%)
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
+KK KWEP +W ++L +R+MR+ DAP D MG + P+++R+ +LISL+LSSQ
Sbjct: 76 SKKLKWEPKNWFQILEGVRKMREKKDAPCDIMGCHMVSGEKADPKLQRFQILISLLLSSQ 135
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
T+DEVN+AA RL + G T E + T E ++ K++ PVGF++TKAK+++ + I + Y+
Sbjct: 136 TRDEVNYAACSRLHDFGFTPEKLKETDEAIIEKMLHPVGFYRTKAKNLRKVAQICFERYD 195
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
+DIP+++E LC+LPGVGPKMA+L MN AW TGIG
Sbjct: 196 SDIPHSVEELCQLPGVGPKMAYLTMNCAWKETTGIG------------------------ 231
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTK--VFKTPEDTRKELESWLPESLWSEVNHLLVGF 337
VD HVHR++ R W K+PEDTR +LESWLP LW E+N LLVGF
Sbjct: 232 -----------VDTHVHRLAQRWLWLPKGQTKSPEDTRLQLESWLPSDLWEELNWLLVGF 280
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
GQ +C P C CL D+CP KE ++ KK+ S
Sbjct: 281 GQTVCGPTHPKCSECLINDVCPNAFKENKKKASPEGKKKAS 321
>gi|195385699|ref|XP_002051542.1| GJ16118 [Drosophila virilis]
gi|194147999|gb|EDW63697.1| GJ16118 [Drosophila virilis]
Length = 353
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 180/353 (50%), Gaps = 50/353 (14%)
Query: 26 MHMVVKYDEPKF---QQTRCQLE------KNIALNNPLDDKEHNDNKTQNKKNTLYKSEK 76
+H V P++ QTR Q + N+ D+ +K + T+ K E
Sbjct: 40 LHSVAATTAPRYFSPVQTRKQRQVNTLPKSNLPAKKARQDEVSKTSKIKIGTATIIKCEL 99
Query: 77 LGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHS 136
+ + + V + E D + A+W + L NIR MR APVD +G
Sbjct: 100 VPPNETMLELKVEEAAAVKTEQD-----FPNANWLQHLENIRLMRCEKPAPVDTLGCHQC 154
Query: 137 ANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP 196
A+ + + +R+H L++LMLSSQTKDE AM RLK LT +I L +L+ P
Sbjct: 155 ADQNANEKTQRFHKLVALMLSSQTKDETTFEAMKRLKAQTLTPASIQGMPAVELERLLHP 214
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
V F+K KAK++K S IL YN DIP+ I+ L KLPGVGPKMAH+CM AW +TGIG
Sbjct: 215 VSFYKNKAKYLKQTSQILVDKYNEDIPDNIQELLKLPGVGPKMAHICMATAWNKITGIG- 273
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTR 315
VD HVHRI++RL W K K PE TR
Sbjct: 274 ----------------------------------VDTHVHRIANRLAWLKKSTKEPEQTR 299
Query: 316 KELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+LESWLP LWSEVNHLLVGFGQ IC RP+C CLN+ +CP LA++
Sbjct: 300 VQLESWLPRPLWSEVNHLLVGFGQTICTPVRPNCSECLNRHICPASASVLAKK 352
>gi|195030160|ref|XP_001987936.1| GH10834 [Drosophila grimshawi]
gi|193903936|gb|EDW02803.1| GH10834 [Drosophila grimshawi]
Length = 373
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 148/253 (58%), Gaps = 36/253 (14%)
Query: 108 AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
A+W + L NIR MR APVD +G A+++ + +R+H L++LMLSSQTKDE
Sbjct: 138 ANWWQHLENIRLMRSQKPAPVDTLGCHQCADINADAKTQRFHKLVALMLSSQTKDETTFE 197
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
AM RLK LT ++ + VL L+ PV F+K KAK++K S IL YN DIP+ I
Sbjct: 198 AMKRLKAQTLTPASMQSMPVGVLENLLHPVSFYKNKAKYLKKTSQILVDKYNEDIPDNIP 257
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L KLPGVGPKMAH+CM AW +TGIG
Sbjct: 258 ELLKLPGVGPKMAHICMATAWNQITGIG-------------------------------- 285
Query: 288 QLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRI++RL W +K K PE TR +LE+WLP LW+EVNHL VGFGQ +C R
Sbjct: 286 ---VDTHVHRIANRLAWLSKSTKEPEQTRIQLETWLPRQLWAEVNHLFVGFGQTVCTPLR 342
Query: 347 PSCETCLNKDLCP 359
P+C CLN+D+CP
Sbjct: 343 PNCSECLNRDICP 355
>gi|195437932|ref|XP_002066893.1| GK24310 [Drosophila willistoni]
gi|194162978|gb|EDW77879.1| GK24310 [Drosophila willistoni]
Length = 351
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 149/257 (57%), Gaps = 36/257 (14%)
Query: 108 AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
A W++ L NIR MR+ APVD MG A+ + + +R+ L++LMLSSQTKDE
Sbjct: 122 AMWEQQLENIRLMRQSAAAPVDTMGCHKCADQEADEKTQRFQNLVALMLSSQTKDETTFE 181
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
AM RLK L+ NI + L L+ PV F+K KAK++K S++L Y DIP+ ++
Sbjct: 182 AMKRLKARNLSPGNIKDMPTSELEGLLHPVSFYKNKAKYLKQTSEVLLDKYGGDIPDNVK 241
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L LPGVGPKMAH+CM+ AW +TGIG
Sbjct: 242 DLIGLPGVGPKMAHICMSVAWHKITGIG-------------------------------- 269
Query: 288 QLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VDVHVHRIS+RLGW K K PE TR LE WLP+SLWSEVNHL VGFGQ IC +
Sbjct: 270 ---VDVHVHRISNRLGWLKTPTKEPEQTRLGLEKWLPKSLWSEVNHLFVGFGQTICTPVK 326
Query: 347 PSCETCLNKDLCPQGKK 363
P+C CLN+D+CP K
Sbjct: 327 PNCAQCLNRDVCPSAYK 343
>gi|195580555|ref|XP_002080101.1| GD21665 [Drosophila simulans]
gi|194192110|gb|EDX05686.1| GD21665 [Drosophila simulans]
Length = 388
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/263 (46%), Positives = 149/263 (56%), Gaps = 36/263 (13%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W L NIR MR APVD MG A++ + +R+ L++LMLSSQTKD+ + AM
Sbjct: 159 WFNHLENIRIMRNSRTAPVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAM 218
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+ GLT + L L+ PV F+K KAK++K DIL Y +DIP+ ++ L
Sbjct: 219 NRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVDILMDKYGSDIPDNVKDL 278
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW +TGIG
Sbjct: 279 VALPGVGPKMAHICMAVAWNKITGIG---------------------------------- 304
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RLGW K K PE TR LE WLP SLWSEVNHL VGFGQ IC +P+
Sbjct: 305 -VDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPN 363
Query: 349 CETCLNKDLCPQGKKELAERVKK 371
C CLNKD+CP E+ E+ KK
Sbjct: 364 CGECLNKDICPSAHAEIKEKKKK 386
>gi|195148504|ref|XP_002015213.1| GL19581 [Drosophila persimilis]
gi|194107166|gb|EDW29209.1| GL19581 [Drosophila persimilis]
Length = 396
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/256 (45%), Positives = 148/256 (57%), Gaps = 36/256 (14%)
Query: 108 AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+ W L NIR MR APVD MG A+ + +R+H L++LMLSSQTKD+ +
Sbjct: 165 SMWYRQLENIRSMRSLNAAPVDTMGCHQCADTTADFKTQRFHKLVALMLSSQTKDQTTYE 224
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
AM RLK LT +++ + L L+ PV F+K KAK++K + IL Y++DIPN ++
Sbjct: 225 AMTRLKARTLTPDSLKDMPIGELETLLHPVSFYKNKAKYLKQTTQILIDKYDSDIPNNVK 284
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L LPGVGPKMAH+CM AW +TGIG
Sbjct: 285 ELIALPGVGPKMAHICMAVAWDKLTGIG-------------------------------- 312
Query: 288 QLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VDVHVHRIS+RLGW + K PE TR LESWLP +LW+EVNHL VGFGQ +C +
Sbjct: 313 ---VDVHVHRISNRLGWLPRPTKEPEQTRVALESWLPSTLWAEVNHLFVGFGQTVCTPLK 369
Query: 347 PSCETCLNKDLCPQGK 362
P+C CLNKD+CP K
Sbjct: 370 PNCGQCLNKDICPSAK 385
>gi|330812778|ref|XP_003291295.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
gi|325078545|gb|EGC32191.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
Length = 710
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 152/256 (59%), Gaps = 36/256 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+EV N I MRK APVD +G + +I P+ RR+H+L+ +LSSQTKD+V HAAM
Sbjct: 476 WEEVWNKIEVMRKENIAPVDTLGAESFNIEEIEPKERRFHILVGCLLSSQTKDQVTHAAM 535
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLKE+GL +E + T + L LI PVGF++ KA ++K ++ILK+ YN DIP T + +
Sbjct: 536 VRLKEYGLNVETVLKTPNEKLETLIHPVGFYRRKAVYLKSIAEILKEKYNGDIPPTFKEI 595
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPG+GPKM +L + AWG V GI
Sbjct: 596 EALPGIGPKMTNLIVQIAWGRVEGIA---------------------------------- 621
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VDVH+HRI +RLGW K TPE+T ++LESWLP W +VNHLLVGFGQ IC RP C
Sbjct: 622 -VDVHMHRICNRLGWVKT-NTPEETMRQLESWLPREKWGQVNHLLVGFGQTICDPVRPKC 679
Query: 350 ETCLNKDLCPQGKKEL 365
+C +LCP G KE+
Sbjct: 680 SSCTVNNLCPVGIKEM 695
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 155/294 (52%), Gaps = 56/294 (19%)
Query: 91 KDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGD-APVDAMGW-------DHSANVDIA 142
K P+ E++ EP W++ L I+ R G A VD MG D NVD
Sbjct: 252 KKPVKTEDERSVVAIEPEGWEKTLETIKRWRADGPPAAVDTMGCEKIADVEDDRVNVD-G 310
Query: 143 PEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKT 202
RRY L S MLSSQTKDE+NHAAM RL+ HG T ENI NT ED L +I PVGF +
Sbjct: 311 DRYRRYLTLTSAMLSSQTKDEINHAAMRRLRAHGCTPENILNTDEDALDAMINPVGFHRR 370
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
KA++++ + IL Y+ DIP ++E LC LPGVGPKMA+L MN WG TGI
Sbjct: 371 KAQYLRATAKILLDEYDGDIPPSVETLCALPGVGPKMAYLVMNVGWGEPTGI-------- 422
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW----------TKVFKTPE 312
CVDVHVHRIS RLGW + KTPE
Sbjct: 423 ---------------------------CVDVHVHRISERLGWVAKDVMGKNGSPRKKTPE 455
Query: 313 DTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC-LNKD-LCPQGKKE 364
DTR LESWLP+ W E+N LLVGFGQ C RP C C L KD CP KE
Sbjct: 456 DTRAALESWLPKHEWIEINPLLVGFGQLTCTPLRPKCHACPLAKDGSCPSAFKE 509
>gi|195351989|ref|XP_002042498.1| GM23290 [Drosophila sechellia]
gi|194124367|gb|EDW46410.1| GM23290 [Drosophila sechellia]
Length = 378
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 149/263 (56%), Gaps = 36/263 (13%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W L NIR MR APVD MG A++ + +R+ L++LMLSSQTKD+ + AM
Sbjct: 149 WFNHLENIRIMRNSRTAPVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAM 208
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+ GLT + L L+ PV F+K KAK++K DIL Y +DIP+ ++ L
Sbjct: 209 NRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVDILMDKYGSDIPDNVKDL 268
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW +TGIG
Sbjct: 269 VALPGVGPKMAHICMAVAWNKITGIG---------------------------------- 294
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RLGW K K PE TR LE WLP SLWSEVNHL VGFGQ IC +P+
Sbjct: 295 -VDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPN 353
Query: 349 CETCLNKDLCPQGKKELAERVKK 371
C CLNK++CP E+ E+ KK
Sbjct: 354 CGECLNKEICPSAHAEIKEKKKK 376
>gi|195475998|ref|XP_002090269.1| GE13013 [Drosophila yakuba]
gi|194176370|gb|EDW89981.1| GE13013 [Drosophila yakuba]
Length = 387
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 145/253 (57%), Gaps = 36/253 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W L NIR MR APVD MG A++ P+ +R+ L++LMLSSQTKD+ + AM
Sbjct: 164 WINHLENIRIMRNSRSAPVDTMGCHRCADLKADPKTQRFQNLVALMLSSQTKDQTTYEAM 223
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+ LT + L L+ PV F+K KAK++K+ +IL Y++DIPN ++ L
Sbjct: 224 NRLKDRSLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKLTVEILIDKYDSDIPNNVKEL 283
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW +TGIG
Sbjct: 284 VALPGVGPKMAHICMAVAWNKITGIG---------------------------------- 309
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RLGW K K PE TR LE WLP SLWSEVNHL VGFGQ IC +P+
Sbjct: 310 -VDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPN 368
Query: 349 CETCLNKDLCPQG 361
C CLNKD+CP
Sbjct: 369 CVECLNKDICPSA 381
>gi|339249321|ref|XP_003373648.1| putative G patch domain-containing protein 1-like protein
[Trichinella spiralis]
gi|316970197|gb|EFV54175.1| putative G patch domain-containing protein 1-like protein
[Trichinella spiralis]
Length = 1154
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 114/260 (43%), Positives = 148/260 (56%), Gaps = 36/260 (13%)
Query: 103 TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
++W P+ WK L NI++MR APVD +G + + +RY +L+SLMLSSQTKD
Sbjct: 918 SQWVPSQWKAQLENIQKMRSQRLAPVDTVGCSKLFDAGADEKTKRYQILLSLMLSSQTKD 977
Query: 163 EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
E+ AAM LK++G ++ I T E L +LI PVGF K+KAK+IK ++IL+ Y+ DI
Sbjct: 978 EITAAAMTSLKKYGCSVNKILQTDESDLAELIYPVGFCKSKAKYIKKTTEILQSQYDGDI 1037
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P +++ LC+LPGVGPKMA L M AW GI
Sbjct: 1038 PKSVDELCQLPGVGPKMALLTMLTAWNQCEGIA--------------------------- 1070
Query: 283 EKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VD HVHRIS+RLGW K PE TRK LE+WLP+S W ++N LLVGFGQ +
Sbjct: 1071 --------VDTHVHRISNRLGWLPSPTKQPEQTRKGLENWLPKSYWPQINKLLVGFGQTV 1122
Query: 342 CKSQRPSCETCLNKDLCPQG 361
C P C CLN +CP
Sbjct: 1123 CLPVNPHCSNCLNFSICPHA 1142
>gi|45550361|ref|NP_610078.2| CG9272 [Drosophila melanogaster]
gi|45445193|gb|AAF53949.2| CG9272 [Drosophila melanogaster]
Length = 388
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 148/263 (56%), Gaps = 36/263 (13%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W L NIR MR APVD MG A++ + +R+ L++LMLSSQTKD+ + AM
Sbjct: 159 WFNHLENIRIMRNSRTAPVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAM 218
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+ GLT + L L+ PV F+K KAK++K +IL Y +DIP+ ++ L
Sbjct: 219 NRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVKDL 278
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW +TGIG
Sbjct: 279 VALPGVGPKMAHICMAVAWNKITGIG---------------------------------- 304
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RLGW K K PE TR LE WLP SLWSEVNHL VGFGQ IC +P+
Sbjct: 305 -VDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPN 363
Query: 349 CETCLNKDLCPQGKKELAERVKK 371
C CLNKD+CP E E+ KK
Sbjct: 364 CGECLNKDICPSAHAETKEKRKK 386
>gi|330812766|ref|XP_003291289.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
gi|325078539|gb|EGC32185.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
Length = 235
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 152/256 (59%), Gaps = 36/256 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+EV N I MRK APVD +G + +I P+ RR+H+L+ +LSSQTKD+V HAAM
Sbjct: 1 WEEVWNKIEVMRKENIAPVDTLGAESFNIEEIEPKERRFHILVGCLLSSQTKDQVTHAAM 60
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLKE+GL +E + T + L LI PVGF++ KA ++K ++ILK+ YN DIP T + +
Sbjct: 61 VRLKEYGLNVETVLKTPNEKLETLIHPVGFYRRKAVYLKSIAEILKEKYNGDIPPTFKEI 120
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPG+GPKM +L + AWG V GI
Sbjct: 121 EALPGIGPKMTNLIVQIAWGRVEGIA---------------------------------- 146
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VDVH+HRI +RLGW K TPE+T ++LESWLP W +VNHLLVGFGQ IC RP C
Sbjct: 147 -VDVHMHRICNRLGWVKT-NTPEETMRQLESWLPREKWGQVNHLLVGFGQTICDPVRPKC 204
Query: 350 ETCLNKDLCPQGKKEL 365
+C +LCP G KE+
Sbjct: 205 SSCTVNNLCPVGIKEM 220
>gi|313231808|emb|CBY08920.1| unnamed protein product [Oikopleura dioica]
Length = 303
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 154/271 (56%), Gaps = 41/271 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ + NI+EMR DAPVD MG + P +R+ +LISL++SSQTKDE+N
Sbjct: 72 PDNWETLYRNIQEMRSKADAPVDTMGCTELYSGQATPVEKRFQILISLLMSSQTKDEINA 131
Query: 167 AAMGRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL EH E N +L LI PVGF KTK+K+I +I + Y++DIP+
Sbjct: 132 GAMKRLNEHFKSFNAEKAANADTALLSSLITPVGFHKTKSKNIVKVGEICRDQYSSDIPD 191
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
TIE L KLPG+GPKM +L ++ AWG GIG
Sbjct: 192 TIEDLVKLPGIGPKMGYLALSCAWGKNEGIG----------------------------- 222
Query: 285 KIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKS 344
VDVHVHRI RL +TK K PE TR +LESWLP+ W E+N LLVGFGQQIC +
Sbjct: 223 ------VDVHVHRICQRLRFTKKPKNPEATRNQLESWLPKEKWQEINKLLVGFGQQICSA 276
Query: 345 QRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
+ P+C CLN +CP K E++ SPKK
Sbjct: 277 KSPNCTNCLNDPICP--KDFSGEKI--SPKK 303
>gi|66818201|ref|XP_642760.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
gi|60470837|gb|EAL68809.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
Length = 349
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 115/257 (44%), Positives = 152/257 (59%), Gaps = 36/257 (14%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
HWKEV + I+ MR APVD +G + +I P +R+H+L+ +LSSQTKD + HAA
Sbjct: 116 HWKEVWDKIKIMRSENLAPVDTLGAESFNQDNIEPIEKRFHILVGCLLSSQTKDAITHAA 175
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
+ RLKE+GLT++ + + L L+ PVGF+K KA ++K ++ILK YN DIP T +
Sbjct: 176 VVRLKEYGLTVDKMLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFKE 235
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
+ +LPG+GPKM +L + AWG V GI
Sbjct: 236 IEQLPGIGPKMTNLIVQIAWGRVEGIA--------------------------------- 262
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVH+HRIS+RLGW K KTPE+T K+LESWLP+ W+ VNHLLVGFGQ IC P
Sbjct: 263 --VDVHMHRISNRLGWVKT-KTPEETMKDLESWLPKENWATVNHLLVGFGQTICSPVNPK 319
Query: 349 CETCLNKDLCPQGKKEL 365
C CL +LCP G E+
Sbjct: 320 CSNCLVNNLCPVGIIEM 336
>gi|40714570|gb|AAR88543.1| RE40459p [Drosophila melanogaster]
Length = 391
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 147/263 (55%), Gaps = 36/263 (13%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W L NIR MR APVD MG A++ + +R+ L++LMLSSQTKD + AM
Sbjct: 164 WFNHLENIRIMRNSRTAPVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDRTTYEAM 223
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+ GLT + L L+ PV F+K KAK++K +IL Y +DIP+ ++ L
Sbjct: 224 NRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVKDL 283
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW +TGIG
Sbjct: 284 VALPGVGPKMAHICMAVAWNKITGIG---------------------------------- 309
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RLGW K K PE TR LE WLP SLWSEVNHL VGFGQ IC +P+
Sbjct: 310 -VDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICTPVKPN 368
Query: 349 CETCLNKDLCPQGKKELAERVKK 371
C CLNKD+CP E E+ KK
Sbjct: 369 CGECLNKDICPSAHAETKEKKKK 391
>gi|198474869|ref|XP_002132792.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
gi|198138583|gb|EDY70194.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 146/256 (57%), Gaps = 36/256 (14%)
Query: 108 AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+ W L NIR MR APVD MG A+ + +R+ L++LMLSSQTKD+ +
Sbjct: 165 SMWYRQLENIRSMRSLNAAPVDTMGCHQCADTTADFKTQRFQKLVALMLSSQTKDQTTYE 224
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
AM RLK LT +++ + L L+ PV F+K KAK++K + IL Y++DIPN +
Sbjct: 225 AMNRLKARTLTPDSLKDMPIGELETLLHPVSFYKNKAKYLKQTTQILIDKYDSDIPNNAK 284
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L LPGVGPKMAH+CM AW +TGIG
Sbjct: 285 ELIALPGVGPKMAHICMAVAWDKLTGIG-------------------------------- 312
Query: 288 QLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VDVHVHRIS+RLGW + K PE TR LESWLP +LW+EVNHL VGFGQ +C +
Sbjct: 313 ---VDVHVHRISNRLGWLPRPTKEPEQTRVALESWLPSTLWAEVNHLFVGFGQTVCTPLK 369
Query: 347 PSCETCLNKDLCPQGK 362
P+C CLNKD+CP K
Sbjct: 370 PNCGQCLNKDICPSAK 385
>gi|320169582|gb|EFW46481.1| endonuclease III-like protein 1 [Capsaspora owczarzaki ATCC 30864]
Length = 412
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 155/267 (58%), Gaps = 37/267 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P+H+ E L NI+EMR +APVD MG + A+ +PE RY VL+SLMLS+QTKDE+
Sbjct: 153 PSHFLEQLTNIQEMRAARNAPVDVMGCERLADTTSSPETYRYQVLLSLMLSAQTKDEITA 212
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AM RL HG T++NI T D + +LI PVGF + KA++I S +LK +++ DIP+TI
Sbjct: 213 GAMKRLIAHGCTLDNILATPVDKIQELIYPVGFHRRKAEYILETSQMLKDSFHGDIPSTI 272
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L L GVGPKMAH+ M+ AW + G+G
Sbjct: 273 EGLVSLKGVGPKMAHITMDVAWQQMVGLG------------------------------- 301
Query: 287 PQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRI++RL W +K KTPEDTRK L+ W+P W +N LLVGFGQ IC+
Sbjct: 302 ----VDTHVHRIANRLKWVSKETKTPEDTRKALQEWMPREYWPGLNVLLVGFGQTICRPV 357
Query: 346 RPSCETCLNKDLCPQGKK-ELAERVKK 371
P C CLN C ++ E R+KK
Sbjct: 358 NPRCWDCLNLHTCAFARRPETRARIKK 384
>gi|170584526|ref|XP_001897050.1| Endonuclease III-like protein 1 [Brugia malayi]
gi|158595585|gb|EDP34128.1| Endonuclease III-like protein 1, putative [Brugia malayi]
Length = 261
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 157/263 (59%), Gaps = 37/263 (14%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
+E+++ TK P W + L NI++MR + DAPVD+MG A+ P+V R+ L+SLM
Sbjct: 27 NEHESASTKESPL-WMKHLENIKQMRSNKDAPVDSMGCHMLADALAEPKVFRFQTLLSLM 85
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD + AAM RL+EHG T++++ + L +L+IPVGF+K KA +IK ++ILK
Sbjct: 86 LSSQTKDHITAAAMHRLREHGCTVDDLVLIPTEKLQQLLIPVGFYKKKAVYIKKVAEILK 145
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ Y+ DIPNT+E LC LPGVG KMA+L M AW + G+G
Sbjct: 146 ERYDGDIPNTVEGLCSLPGVGEKMAYLTMCTAWNQLEGLG-------------------- 185
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLV 335
VD HVHRIS+RLGW K P+++R LE+ +P W E+N LLV
Sbjct: 186 ---------------VDTHVHRISNRLGWIKT-SNPKESRMALEALVPREQWQELNKLLV 229
Query: 336 GFGQQICKSQRPSCETCLNKDLC 358
GFGQQ C P C CLNK++C
Sbjct: 230 GFGQQTCLPVLPKCSECLNKNIC 252
>gi|198413061|ref|XP_002124717.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 183
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 133/217 (61%), Gaps = 35/217 (16%)
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
+R+H+L+SLMLSSQTKD V AAM RL EHGLTI+ I TS++ LG LI PVGFWK K
Sbjct: 2 KRFHILVSLMLSSQTKDHVTFAAMSRLIEHGLTIDYIIGTSDEKLGSLIYPVGFWKKKVG 61
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
++K A ++K+ + DIP +E L KLPGVGPKMA+L M AWGIV GIG
Sbjct: 62 YLKRACIMMKEEFGGDIPKCVESLVKLPGVGPKMAYLTMTCAWGIVVGIG---------- 111
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VDVHVHR+ +RLGW + K PE TR +L+ WLP
Sbjct: 112 -------------------------VDVHVHRVCNRLGWVQGTKQPEQTRLQLQQWLPRE 146
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W E+N LLVGFGQQ+C P C+ CLNK++CP +
Sbjct: 147 NWREINSLLVGFGQQVCLPVAPKCQECLNKNICPSAR 183
>gi|341900542|gb|EGT56477.1| CBN-NTH-1 protein [Caenorhabditis brenneri]
Length = 298
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 152/261 (58%), Gaps = 36/261 (13%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSS 158
D + T A W+ + IR+MR+ APVD MG A+ PEV R+ VL++LMLSS
Sbjct: 10 DLEDTVGGAATWRRDVEWIRKMREGMVAPVDTMGCHKLADPLAPPEVHRFQVLVALMLSS 69
Query: 159 QTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
QT+DEVN AAM RLK+HGL+I+ I L K++ PVGF+K KA +++ + IL Y
Sbjct: 70 QTRDEVNAAAMKRLKDHGLSIQKILEFPVPDLEKILCPVGFYKRKAIYLQQTARILTDKY 129
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELIC 278
+ DIP++++ LC LPGVGPKMA+L M AW
Sbjct: 130 SGDIPDSLDGLCSLPGVGPKMANLVMQIAWD----------------------------- 160
Query: 279 VRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
KCE + VD HVHRIS+RLGW K TPE T+K LE LP+S W +NHLLVGFG
Sbjct: 161 --KCEG----IAVDTHVHRISNRLGWIKT-STPEKTQKALEILLPKSEWQPINHLLVGFG 213
Query: 339 QQICKSQRPSCETCLNKDLCP 359
Q +C+ RP C TCL K CP
Sbjct: 214 QMLCQPVRPKCSTCLCKFTCP 234
>gi|308481910|ref|XP_003103159.1| CRE-NTH-1 protein [Caenorhabditis remanei]
gi|308260264|gb|EFP04217.1| CRE-NTH-1 protein [Caenorhabditis remanei]
Length = 299
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 147/250 (58%), Gaps = 36/250 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+ ++ I++MRK APVD MG A+ PEV R+ VL++LMLSSQT+DEVN AAM
Sbjct: 29 WRRDVDWIQKMRKDMVAPVDTMGCHKLADPLAKPEVHRFQVLVALMLSSQTRDEVNAAAM 88
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+HGL+IE I L +++ PVGF+K KA +++ + IL Y+ DIP++++ L
Sbjct: 89 KRLKDHGLSIEKILEFPVPDLERILCPVGFYKRKAVYLQQTAKILVDKYSGDIPDSLDGL 148
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
C LPGVGPKMA+L M AW GI
Sbjct: 149 CSLPGVGPKMANLVMQIAWNKCEGIA---------------------------------- 174
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HVHRIS+RLGW K TPE TRK LE LP+S W +NHLLVGFGQ +C+ RP C
Sbjct: 175 -VDTHVHRISNRLGWIKT-DTPEKTRKALEILLPKSEWQPINHLLVGFGQMLCQPLRPKC 232
Query: 350 ETCLNKDLCP 359
TCL + CP
Sbjct: 233 STCLCRFTCP 242
>gi|194766301|ref|XP_001965263.1| GF24230 [Drosophila ananassae]
gi|190617873|gb|EDV33397.1| GF24230 [Drosophila ananassae]
Length = 395
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 145/256 (56%), Gaps = 36/256 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W++ L NIR MR APVD MG A+ + +R+ L++LMLSSQTKD+ AM
Sbjct: 166 WQQHLANIRTMRSFMTAPVDTMGCHKCADATADAKTQRFQNLVALMLSSQTKDQTTFEAM 225
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLKE L+ + + + + L L+ PV F+K KAK++K IL + Y++DIP+T + L
Sbjct: 226 NRLKERDLSPQTLNDMPVEELEGLLHPVSFYKNKAKYLKQTVQILIEKYDSDIPDTPKEL 285
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVGPKMAH+CM AW VTGIG
Sbjct: 286 KALPGVGPKMAHICMAVAWNKVTGIG---------------------------------- 311
Query: 290 CVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVHVHR+S+RL W + K PE TR LE WLP SLWSEV LLVGFGQ IC +P+
Sbjct: 312 -VDVHVHRLSNRLKWVPRPTKEPEQTRVALEKWLPYSLWSEVTPLLVGFGQTICTPLKPN 370
Query: 349 CETCLNKDLCPQGKKE 364
C CLNKD+CP E
Sbjct: 371 CRECLNKDICPSANIE 386
>gi|169853989|ref|XP_001833672.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
gi|116505322|gb|EAU88217.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
Length = 450
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 158/281 (56%), Gaps = 45/281 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +WKEV ++I++MR+ APVD MG + + P+ +R+ L+SLMLSSQTKDEV
Sbjct: 152 PDNWKEVYDSIKKMRESIVAPVDTMGCAQAQYKETDPKNQRFATLVSLMLSSQTKDEVTD 211
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+ +++E I N ++ + I VGFW+ K ++K + L++ + D+P
Sbjct: 212 AAVTKLRTALGGAISVEGIINAPSSLISEAIAKVGFWRRKTDYLKQTAAKLQEEFEGDVP 271
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA LC+ AW + GIG
Sbjct: 272 KTVDELCSLPGVGPKMAFLCLQVAWNLNLGIG---------------------------- 303
Query: 284 KKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRIS+RLGW K K PE+TR L+SWLP L E+N LLVGFGQ +C
Sbjct: 304 -------VDVHVHRISNRLGWHRKPTKDPEETRLNLQSWLPSELHQEINPLLVGFGQVVC 356
Query: 343 KSQRPSCETC------LNKDLCPQGKKELAERVKKSPKKRK 377
P C+ C +K LCP +K +AE+ +K+ KRK
Sbjct: 357 TPVNPKCDQCTLSGSSTSKALCPSARKNIAEQKRKTSTKRK 397
>gi|392894666|ref|NP_001254907.1| Protein NTH-1, isoform a [Caenorhabditis elegans]
gi|293324782|emb|CBK55598.1| Protein NTH-1, isoform a [Caenorhabditis elegans]
Length = 293
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 146/250 (58%), Gaps = 36/250 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+ + IR+MRK APVD MG A+ AP V R+ VL++LMLSSQT+DEVN AAM
Sbjct: 25 WRRDVELIRKMRKDMIAPVDTMGCHKLADPLAAPPVHRFQVLVALMLSSQTRDEVNAAAM 84
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+HGL+I I L ++ PVGF+K KA +++ + ILK +++ DIP++++ L
Sbjct: 85 KRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLDGL 144
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
C LPGVGPKMA+L M AWG GI
Sbjct: 145 CALPGVGPKMANLVMQIAWGECVGIA---------------------------------- 170
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HVHRIS+RLGW K TPE T+K LE LP+S W +NHLLVGFGQ C+ RP C
Sbjct: 171 -VDTHVHRISNRLGWIKT-STPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKC 228
Query: 350 ETCLNKDLCP 359
TCL + CP
Sbjct: 229 GTCLCRFTCP 238
>gi|392894664|ref|NP_001254906.1| Protein NTH-1, isoform d [Caenorhabditis elegans]
gi|341941198|sp|P54137.2|NTH1_CAEEL RecName: Full=Probable endonuclease III homolog; AltName:
Full=CeNTH; AltName: Full=DNA-(Apurinic or apyrimidinic
site) lyase
gi|256773103|dbj|BAI22676.1| homolog of human endonuclease III [Caenorhabditis elegans]
gi|257145792|emb|CAA90766.2| Protein NTH-1, isoform d [Caenorhabditis elegans]
Length = 298
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 146/250 (58%), Gaps = 36/250 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+ + IR+MRK APVD MG A+ AP V R+ VL++LMLSSQT+DEVN AAM
Sbjct: 30 WRRDVELIRKMRKDMIAPVDTMGCHKLADPLAAPPVHRFQVLVALMLSSQTRDEVNAAAM 89
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RLK+HGL+I I L ++ PVGF+K KA +++ + ILK +++ DIP++++ L
Sbjct: 90 KRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLDGL 149
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
C LPGVGPKMA+L M AWG GI
Sbjct: 150 CALPGVGPKMANLVMQIAWGECVGIA---------------------------------- 175
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HVHRIS+RLGW K TPE T+K LE LP+S W +NHLLVGFGQ C+ RP C
Sbjct: 176 -VDTHVHRISNRLGWIKT-STPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKC 233
Query: 350 ETCLNKDLCP 359
TCL + CP
Sbjct: 234 GTCLCRFTCP 243
>gi|194878547|ref|XP_001974085.1| GG21536 [Drosophila erecta]
gi|190657272|gb|EDV54485.1| GG21536 [Drosophila erecta]
Length = 383
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 152/279 (54%), Gaps = 46/279 (16%)
Query: 94 IPDENDTKKTKWEPAHWKEV----------LNNIREMRKHGDAPVDAMGWDHSANVDIAP 143
I E +T++TK + + EV L NIR MR APVD MG A++
Sbjct: 138 IKQEKNTEETKEDAHSYSEVQAPHPLWLGHLENIRVMRSSRSAPVDTMGCHRCADLKADS 197
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
+ +R+ L++LMLSSQTKD+ + AM RLK+ T + L L+ PV F+K K
Sbjct: 198 KTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRSPTPLQVKEMPVTELENLLHPVSFYKNK 257
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
AK++K +IL Y++DIP+ ++ L LPGVGPKMAH+CM AW +TGIG
Sbjct: 258 AKYLKQTVEILIDKYDSDIPDNVKDLIALPGVGPKMAHICMAVAWNKITGIG-------- 309
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWL 322
VDVHVHR+ +RLGW K K PE TR LE WL
Sbjct: 310 ---------------------------VDVHVHRLCNRLGWVPKPTKEPEQTRVALEKWL 342
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P SLWSEVNHL VGFGQ IC +P+C CLNKD+CP
Sbjct: 343 PFSLWSEVNHLFVGFGQTICTPVKPNCGECLNKDICPSA 381
>gi|395323833|gb|EJF56288.1| DNA glycosylase [Dichomitus squalens LYAD-421 SS1]
Length = 433
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 153/276 (55%), Gaps = 42/276 (15%)
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLI 152
PIP +T P W+E + I+ MR+ APVD MG D + + P+ +R+ L+
Sbjct: 126 PIPTALETPHPA--PPSWREAYDTIKRMRQRIVAPVDTMGCDQAQLKETDPKNQRFSTLV 183
Query: 153 SLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
SLMLSSQTKDEV AA+ +L+E L+I+ + SE + + I VGFW+ K ++I+
Sbjct: 184 SLMLSSQTKDEVTDAAVAKLREAVGGTLSIDAVLRASESAISEAICKVGFWRRKTQYIRQ 243
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
A+ LK + D+P T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 244 AAQKLKDEFGGDVPKTVDELCSLPGVGPKMAFLALQVAWKVNAGIG-------------- 289
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWS 328
VDVHVHRI++RLGW K KTPE+TR L+SWLP L
Sbjct: 290 ---------------------VDVHVHRITNRLGWHKSPTKTPEETRLNLQSWLPVELHP 328
Query: 329 EVNHLLVGFGQQICKSQRPSCETC-LNKDLCPQGKK 363
++NHLLVGFGQ IC P C+ C L+ LCP +K
Sbjct: 329 DINHLLVGFGQTICAPVGPKCDQCELSDGLCPSARK 364
>gi|226499382|ref|NP_001151454.1| endonuclease III-like protein 1 [Zea mays]
gi|195646916|gb|ACG42926.1| endonuclease III-like protein 1 [Zea mays]
Length = 364
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 190/388 (48%), Gaps = 61/388 (15%)
Query: 4 RSMKNKTLTVPVDTTKNGKQKRMHMVVKYDEPKFQQT----RCQLEKNIALNNPLDDKEH 59
RS L V D + ++ + V +D PK + T R ++ + + +N K+
Sbjct: 21 RSASASRLLVRADNSPVAREIKRESSVSFDTPKPEATVSVKRRRVNRELEVNGQHHKKQV 80
Query: 60 ND--NKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNI 117
D + K TL S K + ++ V I P +W+ VL I
Sbjct: 81 PDIEDFIYEKAKTLTSSSKATTSLVKVEKKVGVSSVI--------KVGAPDNWEAVLGGI 132
Query: 118 REMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL 177
+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV HAA+ RL E+GL
Sbjct: 133 KSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGL 191
Query: 178 T-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
+ I T E L LI PVGF++ KA+ IK AS I + + DIP+++ L L GVG
Sbjct: 192 LDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVG 251
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMAHL M+ AW GI CVD HVH
Sbjct: 252 PKMAHLVMSIAWKNTQGI-----------------------------------CVDTHVH 276
Query: 297 RISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
RIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGFGQ IC RP
Sbjct: 277 RISNRLGW--VFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGFGQTICTPLRPK 334
Query: 349 CETCLNKDLCPQGKKELAERVKKSPKKR 376
C+ C +LCP KE + + K K R
Sbjct: 335 CDKCGINNLCPSAFKESSSPIPKQKKTR 362
>gi|167515508|ref|XP_001742095.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778719|gb|EDQ92333.1| predicted protein [Monosiga brevicollis MX1]
Length = 224
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 150/259 (57%), Gaps = 38/259 (14%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EPA+W++ ++NIR MR+H +APVD+MG + + + P V R+HVL+SLMLSSQTKD +
Sbjct: 1 EPAYWRQHIDNIRHMRRHRNAPVDSMGCETLTDPNTPPAVARFHVLVSLMLSSQTKDAMT 60
Query: 166 HAAMGRLKE--HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA RL+ GLT +++ + + + ++I VGFW+ K ++I + IL +N D+P
Sbjct: 61 AAATRRLQALPGGLTPKSMASMEPEAIAQVIYGVGFWRRKGEYIHKTAKILLAEHNGDVP 120
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
TI L KLPGVG KMA + M A VTGIG
Sbjct: 121 ATIAELVKLPGVGMKMAQIAMAVAHNTVTGIG---------------------------- 152
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVF-KTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
+DVH HRI++RL W KTPE TR LE WLP LW E+N LLVGFGQQIC
Sbjct: 153 -------IDVHCHRIANRLAWCDTAQKTPEHTRVALERWLPRELWGEINLLLVGFGQQIC 205
Query: 343 KSQRPSCETCLNKDLCPQG 361
+ P C +CLN+D+CP
Sbjct: 206 LPRGPKCHSCLNRDICPAA 224
>gi|145356922|ref|XP_001422672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582915|gb|ABP00989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 148/279 (53%), Gaps = 54/279 (19%)
Query: 107 PAHWKEVLNNIREMRKHGD-APVDAMGWDHSANVDIA------PEVRRYHVLISLMLSSQ 159
P W++ L I+ R G A VD MG + A+V+ + RRY L S MLSSQ
Sbjct: 12 PEGWEKTLATIKRWRAEGPRAAVDTMGCEKIADVEGEGGAMDEEKYRRYLTLTSAMLSSQ 71
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
T+DE+NHAAM RL+ HG T EN+ NT ED L ++ PVGF + KA++++ + IL Y+
Sbjct: 72 TRDEINHAAMARLRAHGCTPENVLNTDEDALDAMLNPVGFHRRKAQYLRATAKILLDEYD 131
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIP+++E LC LPGVGPKMA+L MN W TGI
Sbjct: 132 GDIPSSVETLCALPGVGPKMAYLVMNVGWQKPTGI------------------------- 166
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKVF----------KTPEDTRKELESWLPESLWSE 329
CVDVHVHRI+ RLGWT KTPEDTR LE WLP W E
Sbjct: 167 ----------CVDVHVHRITERLGWTPERAIGKNGSPRKKTPEDTRASLERWLPRDEWIE 216
Query: 330 VNHLLVGFGQQICKSQRPSCETC-LNKDL-CPQGKKELA 366
+N LLVGFGQ C RP C C L D CP KE A
Sbjct: 217 INPLLVGFGQLTCTPLRPKCAECPLAADASCPSAFKESA 255
>gi|302801191|ref|XP_002982352.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
gi|300149944|gb|EFJ16597.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
Length = 240
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 144/269 (53%), Gaps = 47/269 (17%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP WKEVL IR+MR DAPVD+MG + A + + P+ RR VLIS +LSSQTKDEVN
Sbjct: 2 EPPKWKEVLEGIRKMRASEDAPVDSMGCE-KAGISLPPKERRVAVLISALLSSQTKDEVN 60
Query: 166 HAAMGRLKE-HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
H AM RL E H L++E++ E + I PVGF+ KA ++K + + + Y DIP
Sbjct: 61 HGAMKRLSERHLLSMEDLSKAEESTIRDAIYPVGFYARKASYLKKVAALCLEKYQGDIPK 120
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
T+ L LPG+GPKMAHL MN W V GI
Sbjct: 121 TLSELLALPGIGPKMAHLVMNVGWESVHGI------------------------------ 150
Query: 285 KIPQLCVDVHVHRISHRLGWTK----------VFKTPEDTRKELESWLPESLWSEVNHLL 334
CVD HVHRI++RL W KTPE+TR LESWLP W +N LL
Sbjct: 151 -----CVDTHVHRITNRLEWVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPINPLL 205
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGKK 363
VGFGQ IC RP C CL +LCP K
Sbjct: 206 VGFGQTICTPLRPRCGDCLISNLCPAAFK 234
>gi|302766179|ref|XP_002966510.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
gi|300165930|gb|EFJ32537.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
Length = 240
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 144/269 (53%), Gaps = 47/269 (17%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP WKEVL IR+MR DAPVD+MG + A + + P+ RR VLIS +LSSQTKDEVN
Sbjct: 2 EPPKWKEVLEGIRKMRASEDAPVDSMGCE-KAGISLPPKERRVAVLISALLSSQTKDEVN 60
Query: 166 HAAMGRLKE-HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
H AM RL E H L++E++ E + I PVGF+ KA ++K + + + Y DIP
Sbjct: 61 HGAMKRLSERHLLSMEDLSKAEESTIRDAIYPVGFYARKASYLKKVAALCLEKYQGDIPK 120
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
T+ L LPG+GPKMAHL MN W V GI
Sbjct: 121 TLSELLALPGIGPKMAHLVMNVGWESVHGI------------------------------ 150
Query: 285 KIPQLCVDVHVHRISHRLGWTK----------VFKTPEDTRKELESWLPESLWSEVNHLL 334
CVD HVHRI++RL W KTPE+TR LESWLP W +N LL
Sbjct: 151 -----CVDTHVHRITNRLEWVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPINPLL 205
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGKK 363
VGFGQ IC RP C CL +LCP K
Sbjct: 206 VGFGQTICTPLRPRCGDCLISNLCPAALK 234
>gi|356541151|ref|XP_003539044.1| PREDICTED: endonuclease III-like protein 1-like [Glycine max]
Length = 354
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 155/285 (54%), Gaps = 46/285 (16%)
Query: 90 NKDPIPDEND---TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVR 146
D IP ++ T+ + PA W++VL IR+MR DAPVD MG + + + P+ R
Sbjct: 86 GSDAIPVASEVASTRSSGESPAQWEKVLEGIRKMRCSADAPVDTMGCEKAGET-LPPKER 144
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAK 205
R+ VL+S +LSSQTKD V H A+ RL ++ L T + I + E+ + KLI PVGF+ KA
Sbjct: 145 RFAVLVSSLLSSQTKDPVTHGAIQRLLQNDLLTADAINDADEETIKKLIYPVGFYTRKAS 204
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
++K ++I Y+ DIP++IE L LPG+GPKMAHL MN W V GI
Sbjct: 205 NLKKIANICLMKYDGDIPSSIEQLLLLPGIGPKMAHLVMNVGWNNVQGI----------- 253
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF------KTPEDTRKELE 319
CVD HVHRI +RLGW TPE+TR+EL+
Sbjct: 254 ------------------------CVDTHVHRICNRLGWVSRLGTKQKTSTPEETREELQ 289
Query: 320 SWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
WLP+ W +N LLVGFGQ IC RP C C +LCP KE
Sbjct: 290 RWLPKEEWVPINPLLVGFGQTICTPLRPRCGECSISELCPSAFKE 334
>gi|403417874|emb|CCM04574.1| predicted protein [Fibroporia radiculosa]
Length = 701
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 149/261 (57%), Gaps = 40/261 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+EV + I++MR APVD MG + + + + P+ RR+ LISLMLSSQTKDE
Sbjct: 423 PPRWREVYDTIKDMRSRKVAPVDTMGCNRAQDEETVPQNRRFATLISLMLSSQTKDETTF 482
Query: 167 AAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+E L++E I N + V+ + I VGFW+ K ++IK ++ L+ +++D+P
Sbjct: 483 AAVTKLREVVGGALSVEAILNADDSVISEAICKVGFWRRKTQYIKQTAEQLRDRFDSDVP 542
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 543 KTVDELCSLPGVGPKMAFLALQDAWKLNAGIG---------------------------- 574
Query: 284 KKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW K KTPE+TR L+SWLP L E+N LLVGFGQ IC
Sbjct: 575 -------VDVHVHRITNRLGWHKPQTKTPEETRLNLQSWLPLELHPEINSLLVGFGQTIC 627
Query: 343 KSQRPSCETC-LNKDLCPQGK 362
P C C L + LCP +
Sbjct: 628 MPVGPKCNDCSLREGLCPSAR 648
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 134/251 (53%), Gaps = 41/251 (16%)
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLI 152
PIP D P+ W+E + I++MR APVD MG + + P+ +R+ L+
Sbjct: 110 PIPQTLDVPHPA--PSRWQETYDAIKDMRSRTVAPVDTMGCGRAQLGETIPKNQRFATLV 167
Query: 153 SLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
SLMLSSQTKDEV AA+ +L+E L++E + + ++ I VGFW+ K ++IK
Sbjct: 168 SLMLSSQTKDEVTSAAVEKLREAVGGSLSVEAVLRADDHIISDAICKVGFWRRKTQYIKR 227
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
+ L ++++D+P T++ LC LPGVGPKMA L ++ AW + GIG
Sbjct: 228 TTQRLHDDFDSDVPKTVDELCSLPGVGPKMAFLALHVAWKVNAGIG-------------- 273
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWS 328
VDVHVHRI++RLGW K PE+TR L+SWLP L
Sbjct: 274 ---------------------VDVHVHRITNRLGWHAPPTKNPEETRLNLQSWLPTELRP 312
Query: 329 EVNHLLVGFGQ 339
LLVGFGQ
Sbjct: 313 TFTGLLVGFGQ 323
>gi|194697286|gb|ACF82727.1| unknown [Zea mays]
Length = 352
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 192/388 (49%), Gaps = 57/388 (14%)
Query: 4 RSMKNKTLTVPVDTTKNGKQKRMHMVVKYDEPKFQQT----RCQLEKNIALNNPLDDKEH 59
RS L V D + ++ + V D PK + T R ++++ + +N K+
Sbjct: 5 RSASASRLLVRADNSPVAREIKRESSVSLDTPKPEATVSVKRRRVKRELEVNGQHHKKQV 64
Query: 60 ND--NKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNI 117
D + K TL S K +L+K V K + P +W+ VL I
Sbjct: 65 PDIEDFIYEKAKTLTSSSK-ATTSLVK---VEKKVGVSSVIKVICAVGAPDNWEAVLGGI 120
Query: 118 REMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL 177
+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV HAA+ RL E+GL
Sbjct: 121 KSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGL 179
Query: 178 T-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
+ I T E L LI PVGF++ KA+ IK AS I + + DIP+++ L L GVG
Sbjct: 180 LDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVG 239
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMAHL M+ AW GI CVD HVH
Sbjct: 240 PKMAHLVMSIAWKNTQGI-----------------------------------CVDTHVH 264
Query: 297 RISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
RIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGFGQ IC RP
Sbjct: 265 RISNRLGW--VFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGFGQTICTPLRPK 322
Query: 349 CETCLNKDLCPQGKKELAERVKKSPKKR 376
C+ C ++CP KE + + K K R
Sbjct: 323 CDKCGINNICPSAFKESSSPIPKQKKTR 350
>gi|108864224|gb|ABA92590.2| Endonuclease III-like protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 362
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 152/281 (54%), Gaps = 47/281 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ +L I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 120 PENWEAILKGIKNMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 178
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E GL + I T E L LI PVGF++ KAK IK AS I + + DIP++
Sbjct: 179 AAVERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDS 238
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 239 LNELLALKGVGPKMAHLVMSIAWKNTQGI------------------------------- 267
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGF
Sbjct: 268 ----CVDTHVHRISNRLGW--VFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGF 321
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
GQ IC RP C+ C ++CP KE + K K R S
Sbjct: 322 GQTICTPLRPKCDMCGINNICPSAFKESSSPNPKQKKMRSS 362
>gi|326437547|gb|EGD83117.1| hypothetical protein PTSG_12076 [Salpingoeca sp. ATCC 50818]
Length = 504
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 145/256 (56%), Gaps = 38/256 (14%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ V NNI+ MR DAPVD MG + A+ +R+H+L++LMLSSQTKDE+
Sbjct: 159 PPNWETVYNNIKTMRSKRDAPVDTMGCEVLADPSADGPTQRFHILVALMLSSQTKDELTS 218
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
A+ L++ GLT + VL + I VGFW+ KA+++K AS ++ ++ DIP
Sbjct: 219 KAVRTLQQQLPGGLTPHTVTAAETRVLEECIYGVGFWRRKAQYLKGASTMILASFGGDIP 278
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
TI L KLPGVG KMA + M A V+GIG
Sbjct: 279 QTIPDLIKLPGVGMKMATITMAVANKQVSGIG---------------------------- 310
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL W + KTPE TR ELE W+P LW EVN LLVGFGQ IC+
Sbjct: 311 -------VDTHVHRIANRLRWVRNTKTPEHTRVELERWMPRRLWGEVNLLLVGFGQTICQ 363
Query: 344 SQRPSCETCLNKDLCP 359
++P C CLNKDLCP
Sbjct: 364 PRQPKCHECLNKDLCP 379
>gi|62734175|gb|AAX96284.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|62734224|gb|AAX96333.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|218185559|gb|EEC67986.1| hypothetical protein OsI_35754 [Oryza sativa Indica Group]
gi|222615819|gb|EEE51951.1| hypothetical protein OsJ_33589 [Oryza sativa Japonica Group]
Length = 373
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 147/267 (55%), Gaps = 47/267 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ +L I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 120 PENWEAILKGIKNMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 178
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E GL + I T E L LI PVGF++ KAK IK AS I + + DIP++
Sbjct: 179 AAVERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDS 238
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 239 LNELLALKGVGPKMAHLVMSIAWKNTQGI------------------------------- 267
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGF
Sbjct: 268 ----CVDTHVHRISNRLGW--VFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGF 321
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKE 364
GQ IC RP C+ C ++CP KE
Sbjct: 322 GQTICTPLRPKCDMCGINNICPSAFKE 348
>gi|336380789|gb|EGO21942.1| hypothetical protein SERLADRAFT_475004 [Serpula lacrymans var.
lacrymans S7.9]
Length = 378
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 175/332 (52%), Gaps = 46/332 (13%)
Query: 50 LNNPLDDKEHN---DNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWE 106
L PL + E ++ K++ + SE G T+ + ++ + P P + K
Sbjct: 53 LRKPLSETESAVKAEDTLYKKEDPMVVSEAPGPSTVSRPKS--PRKPKPIQQSLKVPHPA 110
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+E + I+EMR H APVD MG D + + P+ +R+ L+SLMLSSQTKDEV
Sbjct: 111 PPRWRETYDTIKEMRSHIVAPVDTMGCDQAQLKESDPKSQRFSTLVSLMLSSQTKDEVTD 170
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+E LT++ I + E + + I VGFW+ K ++IK + L+ +++D+P
Sbjct: 171 AAVAKLREAVGGSLTVDAIISVDESTVSEAIAKVGFWRRKTQYIKQTALRLRDEFDSDVP 230
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 231 KTVDELCSLPGVGPKMAFLALQVAWKLNVGIG---------------------------- 262
Query: 284 KKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW + K PE+TR L+SWLP L E+NH+LVGFGQ +C
Sbjct: 263 -------VDVHVHRITNRLGWHQRPTKNPEETRLNLQSWLPTELHPEINHMLVGFGQMVC 315
Query: 343 KSQRPSCETC--LNKDLCPQGKKELAERVKKS 372
P C +C + LCP + + +K+
Sbjct: 316 LPVGPLCGSCRLSSLGLCPSAQGTATAKKRKT 347
>gi|393241149|gb|EJD48672.1| DNA glycosylase [Auricularia delicata TFB-10046 SS5]
Length = 253
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 149/261 (57%), Gaps = 40/261 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PAHW+EV + I MR + APVD MG A + P+ +RY L++LMLSSQTKDEV H
Sbjct: 10 PAHWREVYDTIHRMRDNLVAPVDTMGCHTPAMKEEDPKTKRYVTLVALMLSSQTKDEVTH 69
Query: 167 AAMGRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AA+ L+E GLT++NI + V+ I VGFW+ K +++K A+ L+ +++D+P
Sbjct: 70 AAVMNLREALGGLTVDNILAADDSVISGAIAKVGFWRRKTEYLKKAAQKLRDEFDSDVPK 129
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
T++ LC LPGVGPKMA LC+ AW + GIG
Sbjct: 130 TVDELCSLPGVGPKMAFLCLQSAWKLNVGIG----------------------------- 160
Query: 285 KIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RLGW K TPE TR L+SWLP+ L +VNH+LVGFGQ IC
Sbjct: 161 ------VDTHVHRITNRLGWHKPTTTTPEQTRLNLQSWLPKDLHYDVNHMLVGFGQTICL 214
Query: 344 SQRPSCETC--LNKDLCPQGK 362
P C+ C K LCP +
Sbjct: 215 PVGPKCDVCELSAKKLCPSAR 235
>gi|413916132|gb|AFW56064.1| endonuclease III-like protein 1 [Zea mays]
Length = 287
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 153/279 (54%), Gaps = 47/279 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ VL I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 45 PDNWEAVLGGIKSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 103
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E+GL + I T E L LI PVGF++ KA+ IK AS I + + DIP++
Sbjct: 104 AAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDS 163
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 164 LNELLALRGVGPKMAHLVMSIAWKNTQGI------------------------------- 192
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGF
Sbjct: 193 ----CVDTHVHRISNRLGW--VFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGF 246
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
GQ IC RP C+ C ++CP KE + + K K R
Sbjct: 247 GQTICTPLRPKCDKCGINNICPSAFKESSSPIPKQKKTR 285
>gi|242084784|ref|XP_002442817.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
gi|241943510|gb|EES16655.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
Length = 367
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 156/281 (55%), Gaps = 50/281 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ VL I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 125 PDNWEAVLGGIKSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 183
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E+GL + I T E L LI PVGF++ KA+ IK AS I + + DIP++
Sbjct: 184 AAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDS 243
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 244 LNELLALRGVGPKMAHLVMSIAWKNTQGI------------------------------- 272
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGF
Sbjct: 273 ----CVDTHVHRISNRLGW--VFREGTKQKTTTPEQTRISLEKWLPKDEWEPINPLLVGF 326
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
GQ IC RP C+ C +LCP KE + +PK++K+
Sbjct: 327 GQTICTPLRPKCDNCGINNLCPSAFKESSS---PNPKQKKT 364
>gi|413916131|gb|AFW56063.1| hypothetical protein ZEAMMB73_227959 [Zea mays]
Length = 291
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 153/279 (54%), Gaps = 47/279 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ VL I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 49 PDNWEAVLGGIKSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 107
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E+GL + I T E L LI PVGF++ KA+ IK AS I + + DIP++
Sbjct: 108 AAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDS 167
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 168 LNELLALRGVGPKMAHLVMSIAWKNTQGI------------------------------- 196
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW VF+ TPE TR LE WLP+ W +N LLVGF
Sbjct: 197 ----CVDTHVHRISNRLGW--VFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLVGF 250
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
GQ IC RP C+ C ++CP KE + + K K R
Sbjct: 251 GQTICTPLRPKCDKCGINNICPSAFKESSSPIPKQKKTR 289
>gi|325193803|emb|CCA28012.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 319
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 161/313 (51%), Gaps = 49/313 (15%)
Query: 64 TQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKH 123
T + + KL KR +LK ++ +K DE +W E+L IREMR
Sbjct: 43 TYAYNGSFETTNKLKKRKILKVESPSSKLQSKDEEILATPN---VNWNEMLLKIREMRAT 99
Query: 124 GDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENIC 183
A VD G + + V R+HVLIS MLSSQTKD +N AAM RL ++ LT+E++
Sbjct: 100 MKAEVDEDGSETFYDTKHPAHVARFHVLISAMLSSQTKDPINAAAMRRLLDNELTVESMI 159
Query: 184 NTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN----DIPNTIELLCKLPGVGPKM 239
ED L ++I PV F++ KAK IK + ILK+ + DIP T+E L LPGVGPKM
Sbjct: 160 KIKEDKLAQIIYPVSFYRNKAKSIKKVASILKERESEDGICDIPETVENLVALPGVGPKM 219
Query: 240 AHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRIS 299
A+L MN AW GI CVD HVHRI
Sbjct: 220 AYLVMNVAWNKPVGI-----------------------------------CVDTHVHRIC 244
Query: 300 HRLGWTKVF-------KTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
+RLGW + + PE TRKELE+WLP W +N LLVGFGQ IC +++P C+ C
Sbjct: 245 NRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQTICHARQPKCKDC 304
Query: 353 LNKDLCPQGKKEL 365
+ +CP K L
Sbjct: 305 ALQSICPSASKNL 317
>gi|409082857|gb|EKM83215.1| hypothetical protein AGABI1DRAFT_69456 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 383
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 154/275 (56%), Gaps = 45/275 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+EV + I++MR APVD MG D + + + P+ RR+ L+SLMLSSQTKDEV
Sbjct: 91 PEKWREVYDTIKDMRSRMTAPVDKMGCDQAQHKESDPKNRRFATLVSLMLSSQTKDEVTD 150
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+ L++E + E V+ + I VGFW+ K +IK A+ +L ++++D+P
Sbjct: 151 AAVTKLRAAVGGTLSVEAVIAADESVMSEAINKVGFWRRKTGYIKRATQMLHDDFDSDVP 210
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 211 KTVDELCSLPGVGPKMAFLALQVAWDLNHGIG---------------------------- 242
Query: 284 KKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW K K PE+TR L+SWLP E+NH+LVGFGQ IC
Sbjct: 243 -------VDVHVHRITNRLGWHQKPTKNPEETRLNLQSWLPTEFHREINHMLVGFGQVIC 295
Query: 343 KSQRPSCETC--LNKDLCPQGKKELAERVKKSPKK 375
P C+ C K LCP +K VK+S +K
Sbjct: 296 LPVGPRCDMCDLSTKGLCPSAQKA----VKRSKRK 326
>gi|357156910|ref|XP_003577617.1| PREDICTED: endonuclease III-like protein 1-like isoform 1
[Brachypodium distachyon]
Length = 370
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 146/267 (54%), Gaps = 47/267 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ VL I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 126 PENWEAVLGGIKSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 184
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E+GL + I T E L LI PVGF++ KA+ IK AS + K + DIP++
Sbjct: 185 AAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKVCLKRFGGDIPDS 244
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 245 LTELLALKGVGPKMAHLVMSIAWKNTQGI------------------------------- 273
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW V++ TPE TR LE WLP+ W +N LLVGF
Sbjct: 274 ----CVDTHVHRISNRLGW--VYREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGF 327
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKE 364
GQ IC RP C C LCP KE
Sbjct: 328 GQTICTPLRPKCVNCGINTLCPSAFKE 354
>gi|357156913|ref|XP_003577618.1| PREDICTED: endonuclease III-like protein 1-like isoform 2
[Brachypodium distachyon]
Length = 359
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 146/267 (54%), Gaps = 47/267 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ VL I+ MR G+APVD G + + ++ + P+ RR+ VLIS M+SSQTKDEV H
Sbjct: 115 PENWEAVLGGIKSMRLSGEAPVDTKGCEKAGSL-LPPKERRFAVLISTMMSSQTKDEVTH 173
Query: 167 AAMGRLKEHGLT-IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL E+GL + I T E L LI PVGF++ KA+ IK AS + K + DIP++
Sbjct: 174 AAVERLSENGLLDPDAIVRTDETTLANLIKPVGFYQRKAQFIKEASKVCLKRFGGDIPDS 233
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L L GVGPKMAHL M+ AW GI
Sbjct: 234 LTELLALKGVGPKMAHLVMSIAWKNTQGI------------------------------- 262
Query: 286 IPQLCVDVHVHRISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRIS+RLGW V++ TPE TR LE WLP+ W +N LLVGF
Sbjct: 263 ----CVDTHVHRISNRLGW--VYREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGF 316
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKE 364
GQ IC RP C C LCP KE
Sbjct: 317 GQTICTPLRPKCVNCGINTLCPSAFKE 343
>gi|390598493|gb|EIN07891.1| DNA glycosylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 343
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 157/272 (57%), Gaps = 42/272 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+E N IR+MR APVD MG + + + + + +R+ L+SLMLSSQTKDEV
Sbjct: 64 PANWEETYNTIRQMRAKITAPVDTMGCERAQDEEKDAKSQRFSTLVSLMLSSQTKDEVTD 123
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+ +TI+ + +ED++ I VGFW+ K +IK A+ +LK +N D+P
Sbjct: 124 AAVKKLRAALGGSITIDAVIGAAEDLVSDAINKVGFWRRKTTYIKKAAQMLKDEFNGDVP 183
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + +GIG
Sbjct: 184 KTVDELCSLPGVGPKMAFLALQVAWKLNSGIG---------------------------- 215
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDT-RKELESWLPESLWSEVNHLLVGFGQQI 341
VDVHVHRI++RLGW K K PE+T R L+SWLP+ L E+NH+LVGFGQ +
Sbjct: 216 -------VDVHVHRITNRLGWHKPPTKNPEETSRLNLQSWLPKELHPEINHMLVGFGQTV 268
Query: 342 CKSQRPSCETC--LNKDLCPQGKKELAERVKK 371
C P C+ C K+LCP +K + +++K
Sbjct: 269 CLPIGPRCDLCELPGKNLCPSARKVVNVKMRK 300
>gi|11181952|emb|CAC16135.1| endonuclease III homologue [Arabidopsis thaliana]
Length = 354
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 148/274 (54%), Gaps = 43/274 (15%)
Query: 98 NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
K + P +W EVL IR+MR DAPVD+MG D + + + P RR+ VL+ +LS
Sbjct: 100 TSVKTAGYPPENWVEVLEGIRQMRSSEDAPVDSMGCDKAGSF-LPPTERRFAVLLGALLS 158
Query: 158 SQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SQTKD+VN+AA+ RL ++GL T E + E + +LI PVGF+ KA ++K + I
Sbjct: 159 SQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLV 218
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y+ DIP++++ L LPG+GPKMAHL ++ AW V GI
Sbjct: 219 KYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGI---------------------- 256
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEV 330
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +
Sbjct: 257 -------------CVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAI 303
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LLVGFGQ IC RP CE C LCP KE
Sbjct: 304 NPLLVGFGQMICTPLRPRCEACSVSKLCPAAFKE 337
>gi|345311962|ref|XP_001517653.2| PREDICTED: endonuclease III-like protein 1-like [Ornithorhynchus
anatinus]
Length = 290
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 132/225 (58%), Gaps = 36/225 (16%)
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
+ + WEP W++ L+NIR+ R+ DAPVD +G + + D PEV+RY VL+SLMLSSQ
Sbjct: 100 SGSSPWEPPAWRQHLDNIRDKRESRDAPVDQLGVEQCFDRDAPPEVQRYQVLLSLMLSSQ 159
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKD+V AM RL+ HGL+++ + + LG+LI PVGFWK+K + IK + ILK Y
Sbjct: 160 TKDQVTAGAMRRLQAHGLSVDGVLRMDDATLGRLIYPVGFWKSKVRFIKQTTAILKDRYR 219
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIP T+ L +LPGVGPKMAHL M AWG V+GI
Sbjct: 220 GDIPATVAGLLQLPGVGPKMAHLAMAIAWGAVSGI------------------------- 254
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLP 323
VD HVHRI++RL WT+ K+PE TR LE WLP
Sbjct: 255 ----------AVDTHVHRIANRLQWTQTETKSPEQTRAALEDWLP 289
>gi|145330326|ref|NP_001077988.1| endonuclease III [Arabidopsis thaliana]
gi|17380754|gb|AAL36207.1| putative endonuclease [Arabidopsis thaliana]
gi|20259623|gb|AAM14168.1| putative endonuclease [Arabidopsis thaliana]
gi|330253456|gb|AEC08550.1| endonuclease III [Arabidopsis thaliana]
Length = 377
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 148/274 (54%), Gaps = 43/274 (15%)
Query: 98 NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
K + P +W EVL IR+MR DAPVD+MG D + + + P RR+ VL+ +LS
Sbjct: 123 TSVKTAGYPPENWVEVLEGIRQMRSSEDAPVDSMGCDKAGSF-LPPTERRFAVLLGALLS 181
Query: 158 SQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SQTKD+VN+AA+ RL ++GL T E + E + +LI PVGF+ KA ++K + I
Sbjct: 182 SQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLV 241
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y+ DIP++++ L LPG+GPKMAHL ++ AW V GI
Sbjct: 242 KYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGI---------------------- 279
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEV 330
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +
Sbjct: 280 -------------CVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAI 326
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LLVGFGQ IC RP CE C LCP KE
Sbjct: 327 NPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKE 360
>gi|18402669|ref|NP_565725.1| endonuclease III [Arabidopsis thaliana]
gi|20198157|gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana]
gi|330253455|gb|AEC08549.1| endonuclease III [Arabidopsis thaliana]
Length = 379
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 148/274 (54%), Gaps = 43/274 (15%)
Query: 98 NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
K + P +W EVL IR+MR DAPVD+MG D + + + P RR+ VL+ +LS
Sbjct: 125 TSVKTAGYPPENWVEVLEGIRQMRSSEDAPVDSMGCDKAGSF-LPPTERRFAVLLGALLS 183
Query: 158 SQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SQTKD+VN+AA+ RL ++GL T E + E + +LI PVGF+ KA ++K + I
Sbjct: 184 SQTKDQVNNAAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLV 243
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y+ DIP++++ L LPG+GPKMAHL ++ AW V GI
Sbjct: 244 KYDGDIPSSLDDLLSLPGIGPKMAHLILHIAWNDVQGI---------------------- 281
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEV 330
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +
Sbjct: 282 -------------CVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAI 328
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LLVGFGQ IC RP CE C LCP KE
Sbjct: 329 NPLLVGFGQMICTPIRPRCEACSVSKLCPAAFKE 362
>gi|393220744|gb|EJD06230.1| DNA glycosylase [Fomitiporia mediterranea MF3/22]
Length = 260
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 155/277 (55%), Gaps = 41/277 (14%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P WKE + I+EMRK APVD MG + + +I P+ RR L+SLMLSSQTKDEV
Sbjct: 9 PPRWKETYDAIKEMRKKYIAPVDTMGCEQAQLSEIDPKGRRLSTLVSLMLSSQTKDEVTD 68
Query: 167 AAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L++ +T+E + E + + I VGFW+ K ++IK A+ L+ ++ +D+P
Sbjct: 69 AAVKKLRKALGESITVEALIQADESTISEAINKVGFWRRKTQYIKQAAIRLRDDFGSDVP 128
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA LC+ AW I GIG
Sbjct: 129 KTVDELCSLPGVGPKMAFLCLQRAWDINDGIG---------------------------- 160
Query: 284 KKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RL W K KTPE+TR L+SWLP+ L ++NHLLVGFGQ IC
Sbjct: 161 -------VDVHVHRITNRLRWHKPQTKTPEETRLNLQSWLPKELHPDINHLLVGFGQTIC 213
Query: 343 KSQRPSCETCL--NKDLCPQGKKELAERVKKSPKKRK 377
P C+ C LCP + + +K+ + R+
Sbjct: 214 LPVGPRCDDCTLSTSGLCPSAQNVKTSKSRKALQLRE 250
>gi|328771332|gb|EGF81372.1| hypothetical protein BATDEDRAFT_10576 [Batrachochytrium
dendrobatidis JAM81]
Length = 266
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/257 (42%), Positives = 137/257 (53%), Gaps = 39/257 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA W+E+ + I+ R+ APVD +G + P++ RY L +L LSSQTKD V
Sbjct: 10 PAKWRELYHGIKAYRQDHVAPVDVVGCAMLGD-KTDPKIYRYQTLTALQLSSQTKDAVTA 68
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
A+ LK H GLT+E+I L I VGF KA ++K ++ILK YN+DIP
Sbjct: 69 GAIANLKSHEPGGLTVESILAMDPKTLDGYISKVGFHNRKALYMKQTAEILKTQYNSDIP 128
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+T+ L LPG+GPKMAHL M AW GIG
Sbjct: 129 DTLSGLMSLPGIGPKMAHLAMQEAWNQTVGIG---------------------------- 160
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRISHR+GWTK KTPE +RKELE WLP W+E+N LLVGFGQ +C
Sbjct: 161 -------VDTHVHRISHRIGWTKYLKTPEHSRKELEEWLPRQYWNEINKLLVGFGQTLCL 213
Query: 344 SQRPSCETCLNKDLCPQ 360
P C C LCP+
Sbjct: 214 PVGPKCTECPVSHLCPR 230
>gi|336368058|gb|EGN96402.1| hypothetical protein SERLA73DRAFT_170779 [Serpula lacrymans var.
lacrymans S7.3]
Length = 302
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 165/308 (53%), Gaps = 43/308 (13%)
Query: 71 LYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDA 130
+ SE G T+ + ++ + P P + K P W+E + I+EMR H APVD
Sbjct: 1 MVVSEAPGPSTVSRPKS--PRKPKPIQQSLKVPHPAPPRWRETYDTIKEMRSHIVAPVDT 58
Query: 131 MGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSE 187
MG D + + P+ +R+ L+SLMLSSQTKDEV AA+ +L+E LT++ I + E
Sbjct: 59 MGCDQAQLKESDPKSQRFSTLVSLMLSSQTKDEVTDAAVAKLREAVGGSLTVDAIISVDE 118
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
+ + I VGFW+ K ++IK + L+ +++D+P T++ LC LPGVGPKMA L + A
Sbjct: 119 STVSEAIAKVGFWRRKTQYIKQTALRLRDEFDSDVPKTVDELCSLPGVGPKMAFLALQVA 178
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TK 306
W + GIG VDVHVHRI++RLGW +
Sbjct: 179 WKLNVGIG-----------------------------------VDVHVHRITNRLGWHQR 203
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKE 364
K PE+TR L+SWLP L E+NH+LVGFGQ +C P C +C + LCP +
Sbjct: 204 PTKNPEETRLNLQSWLPTELHPEINHMLVGFGQMVCLPVGPLCGSCRLSSLGLCPSAQGT 263
Query: 365 LAERVKKS 372
+ +K+
Sbjct: 264 ATAKKRKT 271
>gi|430813977|emb|CCJ28721.1| unnamed protein product [Pneumocystis jirovecii]
Length = 300
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 158/283 (55%), Gaps = 53/283 (18%)
Query: 89 HNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRK--HGDAPVDAMGWDHSANVDIAPEVR 146
HN D EN +K+ P HW+ V + I++MRK +APVD MG D +A+ D +
Sbjct: 26 HNYDY---ENKNEKS---PKHWETVYHEIKKMRKTIAANAPVDTMGCDVAADKDTS---- 75
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTK 203
R LISLMLSSQTKD N AM LK+ GLT++++ + E+VL + I PVGF K
Sbjct: 76 RLQTLISLMLSSQTKDTANAIAMRTLKQKLPGGLTLKSLIDVDEEVLNEFIRPVGFHNRK 135
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
AK+IK IL+++YN DIP+TI+ L LPG+G KMAHLC++ AW GIG
Sbjct: 136 AKYIKETVKILERDYNGDIPSTIKDLVALPGLGFKMAHLCLSCAWNRTEGIG-------- 187
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
VDVHVHRIS+ LGW KTPE TR +LESWLP
Sbjct: 188 ---------------------------VDVHVHRISNLLGWVNT-KTPEQTRLKLESWLP 219
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNK--DLCPQGKKE 364
W E+NHL VGFGQ IC ++ C C +LCP K+
Sbjct: 220 RKYWKEINHLFVGFGQTICLPRKRKCSECTLSFLNLCPSSIKK 262
>gi|426200726|gb|EKV50650.1| hypothetical protein AGABI2DRAFT_63644 [Agaricus bisporus var.
bisporus H97]
Length = 370
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 154/276 (55%), Gaps = 46/276 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+EV + I++MR APVD MG D + + + P+ RR+ L+SLMLSSQTKDEV
Sbjct: 78 PEKWREVYDTIKDMRSRMTAPVDKMGCDQAQHKESDPKNRRFATLVSLMLSSQTKDEVTD 137
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+ L++E I E V+ + I VGFW+ K +IK A+ +L ++++D+P
Sbjct: 138 AAVTKLRAAVGGTLSVEAIIAADESVMSEAINKVGFWRRKTGYIKRAAQMLHDDFDSDVP 197
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 198 KTVDELCSLPGVGPKMAFLALQVAWDLNHGIG---------------------------- 229
Query: 284 KKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW K K PE+TR L+SWLP E+NH+LVGFGQ IC
Sbjct: 230 -------VDVHVHRITNRLGWHQKPTKNPEETRLNLQSWLPTEFHREINHMLVGFGQVIC 282
Query: 343 KSQRPSCETC--LNKDLCPQGKKELAERVKKSPKKR 376
P C+ C LCP A++V KS K++
Sbjct: 283 LPVGPRCDMCNLSTNGLCPS-----AQKVVKSSKRK 313
>gi|170093764|ref|XP_001878103.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646557|gb|EDR10802.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 236
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 149/263 (56%), Gaps = 41/263 (15%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP WKE + I+EMR + APVD MG D + + P+ RR+ L+SLMLSSQTKDEV
Sbjct: 9 EPERWKETYDTIKEMRSNFVAPVDTMGCDQAQFKESDPKSRRFATLVSLMLSSQTKDEVT 68
Query: 166 HAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
AA+ +L+E LT++ + V+ + I VGFW+ K +++ A+ L+ +++D+
Sbjct: 69 DAAVSKLREALGGSLTVDAMIEAEPSVISEAIAKVGFWRRKTDYLQRAAQRLRDEFDSDV 128
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 129 PKTVDELCSLPGVGPKMAFLALQVAWDLNHGIG--------------------------- 161
Query: 283 EKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VDVHVHRI++RLGW K K PE+TR L+SWLP+ L E+NH+LVGFGQ +
Sbjct: 162 --------VDVHVHRITNRLGWHKKPTKNPEETRLNLQSWLPKELHREINHMLVGFGQVV 213
Query: 342 CKSQRPSCETCL--NKDLCPQGK 362
C P C++C K LCP +
Sbjct: 214 CLPVGPKCDSCALSTKQLCPSAR 236
>gi|242221333|ref|XP_002476417.1| predicted protein [Postia placenta Mad-698-R]
gi|220724324|gb|EED78375.1| predicted protein [Postia placenta Mad-698-R]
Length = 258
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 150/262 (57%), Gaps = 39/262 (14%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+E + I++MR APVD MG D + P+ +R+ L+SLMLSSQTKDEV
Sbjct: 19 PERWREAYDTIKDMRSRIIAPVDTMGCDRPQLEETTPQNQRFATLVSLMLSSQTKDEVTF 78
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+ L+++ + + +G+ I VGFW+ K ++IK A+ IL+ +N+D+P
Sbjct: 79 AAVCKLRAAIGGALSVDALLAADDSAIGEAICKVGFWRRKTQYIKRATQILRDEFNSDVP 138
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGI-VTGIGKDESRQPILSPSSRQISRSELICVRKC 282
T+E LC LPGVGPKMA L + AW + V +G
Sbjct: 139 KTVEELCSLPGVGPKMAFLALQDAWKLQVVNVG--------------------------- 171
Query: 283 EKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
+ VDVHVHRI++RLGW K + KTPE+TR LESWLP L ++N LLVGFGQ +
Sbjct: 172 ------IGVDVHVHRITNRLGWHKPLTKTPEETRVNLESWLPLELHPKINALLVGFGQTV 225
Query: 342 CKSQRPSCETC-LNKDLCPQGK 362
C P C+TC L+ LCP +
Sbjct: 226 CLPVGPRCDTCELSNGLCPSAR 247
>gi|342186290|emb|CCC95776.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 259
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 148/278 (53%), Gaps = 40/278 (14%)
Query: 102 KTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTK 161
KT P +W ++ ++E+R+ APVD +G +++ E+RRYH+L++LMLS+QTK
Sbjct: 3 KTFKPPPNWNKLYTKVKEIREEIVAPVDTVGCSKLFGKNVSNEIRRYHILLALMLSAQTK 62
Query: 162 DEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
D V AAM L EHG T E I N E L + I VGF TKAKHIK A+ + + +N
Sbjct: 63 DHVTAAAMFSLIEHGCTPEMIFNMPEVKLNEHISKVGFHNTKAKHIKAATRFIVERHNGM 122
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRK 281
+P + E L LPGVGPKMAHL + A G++ GIG
Sbjct: 123 VPRSYEDLVGLPGVGPKMAHLFLQEADGVILGIG-------------------------- 156
Query: 282 CEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQ 340
VD HVHRI+ R W K PEDTRK LESWLP W E+N LLVG GQ
Sbjct: 157 ---------VDTHVHRIAQRFRWVPSTVKGPEDTRKALESWLPRVYWGEINGLLVGLGQT 207
Query: 341 ICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
IC + P C C LCP +E ++ K++KS
Sbjct: 208 ICTPRLPQCSECGANKLCPSAFRE----ARRGTKRQKS 241
>gi|389747875|gb|EIM89053.1| DNA glycosylase [Stereum hirsutum FP-91666 SS1]
Length = 477
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 148/266 (55%), Gaps = 43/266 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+E + I+EMR APVD MG D + + P+ +R+ LISLMLSSQTKDEV
Sbjct: 159 PERWRETYDAIKEMRSKITAPVDTMGCDRAQYKETEPKNQRFATLISLMLSSQTKDEVTD 218
Query: 167 AAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L++ L++E + + ++ + I VGFW+ K ++IK ++ L+ ++++D+P
Sbjct: 219 AAVNKLRQVVGGTLSLEAVLAADDAIVSEAINKVGFWRRKTQYIKQSAQRLRDSFDSDVP 278
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA LC+ AW + GIG
Sbjct: 279 KTVDELCSLPGVGPKMAFLCLQSAWKLNHGIG---------------------------- 310
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++ LGW + KTPE TR L+SWLP+ L E+NHLLVGFGQ IC
Sbjct: 311 -------VDVHVHRITNWLGWHRPPTKTPEQTRLNLQSWLPKELHGEINHLLVGFGQVIC 363
Query: 343 KSQRPSCETCL----NKDLCPQGKKE 364
P C C LCP + E
Sbjct: 364 TPVAPRCTECTLSPSGLGLCPSARAE 389
>gi|303272029|ref|XP_003055376.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463350|gb|EEH60628.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 298
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 147/282 (52%), Gaps = 50/282 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPE--VRRYHVLISLMLSSQTKDEV 164
P W++VL I+ R G APVD MG + + D AP+ RR+ L+S MLSSQTKD +
Sbjct: 45 PEDWRDVLAAIKRQRAVGGAPVDTMGCEKISE-DAAPDDRGRRFVTLVSAMLSSQTKDPI 103
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
HAA RL +HG T ENI TS + L +I PVGF K ++++ A+ + + DIP+
Sbjct: 104 THAATARLVKHGCTPENIAATSAEDLAAIIRPVGFHARKGQYLRDAARACVERHGGDIPS 163
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMA+L MN WG+ +GI
Sbjct: 164 DVDGLMALPGVGPKMAYLVMNVGWGVPSGI------------------------------ 193
Query: 285 KIPQLCVDVHVHRISHRLGWTKVF-----------KTPEDTRKELESWLPESLWSEVNHL 333
CVDVHVHRI+ RLGW +TPEDTR+ LE+WLP W E+N L
Sbjct: 194 -----CVDVHVHRIAERLGWVPSVAFTSNGTPRKNRTPEDTREALEAWLPREEWIEINPL 248
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQG-KKELAERVKKSPK 374
LVG GQ C + P C C +CP K E A R KK K
Sbjct: 249 LVGHGQLTCAPKAPKCGECAANAMCPSAFKDEEARRAKKEEK 290
>gi|367024033|ref|XP_003661301.1| hypothetical protein MYCTH_2300528 [Myceliophthora thermophila ATCC
42464]
gi|347008569|gb|AEO56056.1| hypothetical protein MYCTH_2300528 [Myceliophthora thermophila ATCC
42464]
Length = 510
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 153/280 (54%), Gaps = 54/280 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+E+ +R+MR G +A VD MG + A+ D +P RR+H L++LMLSSQTKD
Sbjct: 189 PSDWEEMYELVRQMRISGPAANAAVDTMGCERLADPDASPRERRFHTLVALMLSSQTKDT 248
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RL+ GLT+EN+ VL +LI VGF K +++K ++I
Sbjct: 249 VNAEAMARLRTELPPHEPGARPGLTVENVLAVDPAVLNRLISKVGFHNNKTRYLKQTAEI 308
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
L+ + +DIP TI+ L LPGVGPKMAHLCM+ H WG V GIG
Sbjct: 309 LRDRFGSDIPPTIDGLTSLPGVGPKMAHLCMSATHGWGRVEGIG---------------- 352
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW + + PEDTR+ LESWLP W E+
Sbjct: 353 -------------------VDVHVHRITNLWGWQRPPTRGPEDTRRALESWLPRDRWKEI 393
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
N LLVGFGQ +C P C + +L +G + A+R K
Sbjct: 394 NWLLVGFGQTVCL---PVGRRCGDCELGLRGLCKSADRAK 430
>gi|297826589|ref|XP_002881177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327016|gb|EFH57436.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 354
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 145/265 (54%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W +VL IR+MR DAPVD+MG D + + + P RR+ VL+ +LSSQTKD+VN+
Sbjct: 109 PENWVKVLEGIRQMRSSEDAPVDSMGCDKAGSF-LPPTERRFAVLLGALLSSQTKDQVNN 167
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++ L T E + E + +LI PVGF+ KA ++K + I YN DIP++
Sbjct: 168 AAIHRLHQNSLLTPEAVDKADESTIRELIYPVGFYTRKATYMKKIARICLVKYNGDIPSS 227
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ L LPG+GPKMAHL ++ AW V GI
Sbjct: 228 LDDLLSLPGIGPKMAHLILHIAWNDVQGI------------------------------- 256
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +N LLVGFGQ
Sbjct: 257 ----CVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQ 312
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP CE C LCP KE
Sbjct: 313 TICTPLRPRCEACSVTKLCPAAFKE 337
>gi|449468790|ref|XP_004152104.1| PREDICTED: endonuclease III-like protein 1-like [Cucumis sativus]
gi|449521044|ref|XP_004167541.1| PREDICTED: endonuclease III-like protein 1-like [Cucumis sativus]
Length = 386
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 141/265 (53%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W++VL IREMR +APVD MG + + + P+ RR+ VL S +LSSQTKD V H
Sbjct: 141 PVNWEKVLKGIREMRSSEEAPVDTMGCGRAGST-LPPKERRFAVLASSLLSSQTKDHVTH 199
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
A RL+E GL T + + E+ + LI PVGF+ TKAK++K + I Y DIP +
Sbjct: 200 GAALRLQESGLLTADAMDKADEETIKSLIYPVGFYSTKAKNLKKIARICLMKYGGDIPRS 259
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+ L LPG+GPK+AHL M AW V GI
Sbjct: 260 LAELLLLPGIGPKIAHLIMIMAWNDVQGI------------------------------- 288
Query: 286 IPQLCVDVHVHRISHRLGWT------KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW + TPE+TR LE WLP+ W +N LLVGFGQ
Sbjct: 289 ----CVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLVGFGQ 344
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP C C DLCP KE
Sbjct: 345 TICTPLRPKCGNCSVSDLCPSAFKE 369
>gi|340059436|emb|CCC53820.1| putative endonuclease III [Trypanosoma vivax Y486]
Length = 259
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 157/291 (53%), Gaps = 49/291 (16%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
++T P++W ++ I+E+R+ +APVD +G + + EVRRYH+L++LMLS+QT
Sbjct: 2 RRTFKPPSNWSKLYAVIKEIREKVEAPVDTVGCAKLFDTKASNEVRRYHILLALMLSAQT 61
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AM L ++G T +I +E L I VGF TKAK+IK A+D++ K +
Sbjct: 62 KDQVTADAMFSLIKYGCTPASISKMTESKLNDFISKVGFHNTKAKNIKAATDMILKLHEG 121
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
+P + E L LPGVGPKMAHL + A G+V GIG
Sbjct: 122 KVPQSYEELIALPGVGPKMAHLFLQAADGVVLGIG------------------------- 156
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRI+ R W K+PEDTRK LESWLP W E+N LLVG GQ
Sbjct: 157 ----------VDTHVHRIAQRFRWVPATVKSPEDTRKALESWLPREHWGEINELLVGLGQ 206
Query: 340 QICKSQRPSCETCLNKDLCPQ--------GKKELAERVK-----KSPKKRK 377
IC + P C C+ LCP GK++ + ++ K+PK+RK
Sbjct: 207 TICAPRFPQCAECMANKLCPNAFVESRKCGKRQSSVEIEDLVTPKTPKRRK 257
>gi|21537257|gb|AAM61598.1| putative endonuclease [Arabidopsis thaliana]
Length = 379
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 145/265 (54%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W VL IR+MR DAPVD+MG D + + + P RR+ VL+ +LSSQTKD+VN+
Sbjct: 134 PENWVGVLEGIRQMRSSEDAPVDSMGCDKAGSF-LPPTERRFAVLLGALLSSQTKDQVNN 192
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++GL T E + E + +LI PVGF+ KA ++K + I Y+ DIP++
Sbjct: 193 AAIHRLHQNGLLTPEAVDKADESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSS 252
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ L LPG+GPKMAHL ++ AW V GI
Sbjct: 253 LDDLLSLPGIGPKMAHLILHIAWNDVQGI------------------------------- 281
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +N LLVGFGQ
Sbjct: 282 ----CVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLVGFGQ 337
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP CE C LCP KE
Sbjct: 338 MICTPLRPRCEACSVSKLCPAAFKE 362
>gi|392596315|gb|EIW85638.1| DNA glycosylase [Coniophora puteana RWD-64-598 SS2]
Length = 364
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 146/262 (55%), Gaps = 41/262 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P WKE + I+EMR + APVD MG + + + P +R+ L+SLMLSSQTKDEV
Sbjct: 114 PPRWKETYDTIKEMRANIIAPVDTMGCEQAQLTEQDPRNQRFSTLVSLMLSSQTKDEVTD 173
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ +L+E L++E I E V+ K I VGFW+ K ++IK + LK ++++++P
Sbjct: 174 AAVRKLREAVGGTLSMEAIIAVDEGVVAKAIEKVGFWRRKTQYIKQTAQRLKDDFDSEVP 233
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 234 KTVDELCSLPGVGPKMAFLALQVAWKLNVGIG---------------------------- 265
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW K + PE TR L+SWLP L ++N +LVGFGQ +C
Sbjct: 266 -------VDVHVHRITNRLGWHKPPTREPEQTRLNLQSWLPIELHPDINLMLVGFGQTVC 318
Query: 343 KSQRPSCETC--LNKDLCPQGK 362
+P CE C DLCP K
Sbjct: 319 LPVKPRCEMCKLSTMDLCPSAK 340
>gi|340923756|gb|EGS18659.1| hypothetical protein CTHT_0052650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 471
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/272 (42%), Positives = 146/272 (53%), Gaps = 57/272 (20%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P +W+E+ N ++EMR G +A VD MG + A D +P RR+ L++LMLSSQTKD
Sbjct: 168 PTNWEEMYNLVKEMRISGPAANAAVDTMGCERLARADASPRDRRFQTLVALMLSSQTKDT 227
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RL GL +EN+ +L +LI VGF K K++K ++I
Sbjct: 228 VNAEAMARLHNELPPHKPGAPPGLNLENMLAVDPKLLNELIGKVGFHNLKTKYLKQTAEI 287
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
L+ + DIP T+E LC LPGVGPKMAHLCM+ + W V GIG
Sbjct: 288 LRDKFGGDIPPTVETLCSLPGVGPKMAHLCMSATYGWNKVEGIG---------------- 331
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVN 331
VDVHVHRI++ GW + KTPEDTRK LESWLP W E+N
Sbjct: 332 -------------------VDVHVHRITNLWGWNET-KTPEDTRKALESWLPRDKWKEIN 371
Query: 332 HLLVGFGQQICKSQRPS-----CETCLNKDLC 358
LLVGFGQ +C + S CE L + LC
Sbjct: 372 WLLVGFGQTVCGPVKGSRRCGECELGL-RGLC 402
>gi|156065713|ref|XP_001598778.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980]
gi|154691726|gb|EDN91464.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 437
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 140/259 (54%), Gaps = 49/259 (18%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P W+EV + + +MRK G +A VD MG D + P+ +RYH L +LMLSSQTKD
Sbjct: 119 PNDWREVYDVVMQMRKLGVAQNAAVDTMGCDKLGQDTVDPKTKRYHTLTALMLSSQTKDT 178
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
N AM RL GLT++NI +L +LI VGF K K+IK A++I
Sbjct: 179 TNAVAMNRLYTELPAYKEGAPIGLTLDNILAVDPKLLNELIWVVGFHNNKTKYIKAAAEI 238
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
LK +N DIP+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 239 LKDQWNGDIPDTIEGLMSLPGVGPKMAYLCMSSAWGRTEGIG------------------ 280
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K PE+TR L++WLP+ LW E+N L
Sbjct: 281 -----------------VDVHVHRITNMWGW-HTTKGPEETRLALQAWLPKELWHEINWL 322
Query: 334 LVGFGQQICKSQRPSCETC 352
LVGFGQ IC C +C
Sbjct: 323 LVGFGQTICLPVGKKCGSC 341
>gi|255587056|ref|XP_002534117.1| endonuclease III, putative [Ricinus communis]
gi|223525829|gb|EEF28268.1| endonuclease III, putative [Ricinus communis]
Length = 357
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 158/302 (52%), Gaps = 50/302 (16%)
Query: 90 NKDPIPDENDT----KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEV 145
++D +P +N+ + + PA+W+ VL IR+MR DAPVD MG + + + + E
Sbjct: 91 SRDVLPVDNEVACTIRPSDEPPANWEIVLEGIRKMRSSEDAPVDTMGCEKAGSFLPSKE- 149
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKA 204
RR+ VL+S ++SSQTKD V H A+ RL ++ L T + I E + LI PVGF+ KA
Sbjct: 150 RRFAVLVSSLMSSQTKDHVTHGAVQRLHQNSLLTADAIDKADETTIKDLIYPVGFYTRKA 209
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
++K + I Y+ DIP ++E L LPG+GPKMAHL MN AW V GI
Sbjct: 210 SNLKKIAKICLMKYDGDIPRSLEDLLSLPGIGPKMAHLVMNVAWDDVQGI---------- 259
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKEL 318
CVD HVHRI +RLGW T PE+TR L
Sbjct: 260 -------------------------CVDTHVHRICNRLGWVSRPGTEQKTSNPEETRVAL 294
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL---AERVKKSPKK 375
+ WLP+ W +N LLVGFGQ IC RP C C + CP KE A ++KKS
Sbjct: 295 QLWLPKEEWVPINPLLVGFGQTICTPLRPRCGMCSITEFCPSAFKETSSPASKMKKSGLS 354
Query: 376 RK 377
RK
Sbjct: 355 RK 356
>gi|71412348|ref|XP_808363.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70872553|gb|EAN86512.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 135/259 (52%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ + ++E+R+ DAPVD +G + E RRYH+L++LMLS+QTKD V
Sbjct: 9 PPNWERLYVRVKELREGLDAPVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTA 68
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L G T E I E L I VGF KAKHIK A+D + K + +P++
Sbjct: 69 AAMHALIRIGCTPEVIAKMPEKTLDGFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSY 128
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPG+GPKMAHL + A G+V GIG
Sbjct: 129 EDLIALPGIGPKMAHLFLQEADGVVLGIG------------------------------- 157
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRIS R W KTPEDTRK LESWLP W E+N LLVG GQ IC +
Sbjct: 158 ----VDTHVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPR 213
Query: 346 RPSCETCLNKDLCPQGKKE 364
P C C DLCP KE
Sbjct: 214 LPRCSECPASDLCPNAFKE 232
>gi|154304871|ref|XP_001552839.1| hypothetical protein BC1G_09021 [Botryotinia fuckeliana B05.10]
Length = 437
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 140/259 (54%), Gaps = 49/259 (18%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P W+EV + + EMRK G +A VD MG D + P+ +RYH L +LMLSSQTKD
Sbjct: 120 PNDWREVYDIVMEMRKLGVAQNAAVDTMGCDKLGQDTVDPKTKRYHTLTALMLSSQTKDT 179
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
N AM RL GLT++NI +L +LI VGF K K+IK A++I
Sbjct: 180 TNAVAMNRLYTELPAHKEGAPIGLTLDNILAVDPKLLNELIWVVGFHNNKTKYIKAAAEI 239
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+ +N DIP+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 240 LRDQWNGDIPDTIEGLMSLPGVGPKMAYLCMSSAWGRTEGIG------------------ 281
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K PE+TR L++WLP+ LW E+N L
Sbjct: 282 -----------------VDVHVHRITNMWGW-HTTKGPEETRLALQAWLPKELWHEINWL 323
Query: 334 LVGFGQQICKSQRPSCETC 352
LVGFGQ +C C +C
Sbjct: 324 LVGFGQTVCLPVGKKCGSC 342
>gi|71409393|ref|XP_807044.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70870956|gb|EAN85193.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 137/259 (52%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+++ ++E+R+ +APVD +G + E RRYH+L++LMLS+QTKD V
Sbjct: 9 PPNWEKLYVRVKELREGLEAPVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTA 68
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L G T E I E L + I VGF KAKHIK A+D + K + +P++
Sbjct: 69 AAMHALIRIGCTPEVIAKMPEKTLDEFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSY 128
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPG+GPKMAHL + A G+V GIG
Sbjct: 129 EDLIALPGIGPKMAHLFLQEADGVVLGIG------------------------------- 157
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRIS R W KTPEDTRK LESWLP W E+N LLVG GQ IC +
Sbjct: 158 ----VDTHVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPR 213
Query: 346 RPSCETCLNKDLCPQGKKE 364
P C C DLCP KE
Sbjct: 214 LPRCSECPASDLCPNAFKE 232
>gi|452987710|gb|EME87465.1| hypothetical protein MYCFIDRAFT_26406 [Pseudocercospora fijiensis
CIRAD86]
Length = 413
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 142/276 (51%), Gaps = 48/276 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+EV N EMRK APVD MG + A +P RR LI+LMLSSQTKD V
Sbjct: 122 PTNWEEVYNITAEMRKTRLAPVDTMGCESLAEETRSPRDRRLQTLIALMLSSQTKDTVTA 181
Query: 167 AAMGRLK---EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM L+ E G +E + L +I VGF K K IK ++IL+ +N DIP
Sbjct: 182 VAMKNLQDGLEGGFNLEALLEVDSPTLNSMINKVGFHNNKTKFIKQVAEILRDKFNGDIP 241
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 242 DTIEGLVSLPGVGPKMAYLCMSSAWGRDEGIG---------------------------- 273
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K TPE TR+ LESWLP+ W ++NHLLVGFGQ C
Sbjct: 274 -------VDVHVHRITNLWGWHKT-STPEQTREALESWLPKEKWHDINHLLVGFGQTFCP 325
Query: 344 SQRPSCETC--LNKDLCPQGKKELAERVKKSPKKRK 377
C C K LCP R SPKK++
Sbjct: 326 PVGRDCSQCELGVKRLCPG-------RTAGSPKKKR 354
>gi|336472474|gb|EGO60634.1| hypothetical protein NEUTE1DRAFT_144022 [Neurospora tetrasperma
FGSC 2508]
gi|350294301|gb|EGZ75386.1| hypothetical protein NEUTE2DRAFT_105079 [Neurospora tetrasperma
FGSC 2509]
Length = 814
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 155/280 (55%), Gaps = 54/280 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+EV N ++EMR G +A VD+MG + A+ + + RR+H L++LMLSSQTKD
Sbjct: 179 PSDWEEVYNLVKEMRISGPAANAAVDSMGCERLASNNASARDRRFHTLVALMLSSQTKDT 238
Query: 164 VNHAAMGRLK----------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK E GL +EN+ VL +LI VGF K K++K A++I
Sbjct: 239 VNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNELIGKVGFHNNKTKYLKQAAEI 298
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCM--NHAWGIVTGIGKDESRQPILSPSSRQI 271
L+ YN+DIP+TIE L LPGVGPKMAHLCM ++ W V GIG
Sbjct: 299 LRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRVEGIG---------------- 342
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW KTPE+TR L+SWLP W E+
Sbjct: 343 -------------------VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEI 383
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
N LLVGFGQ IC P C + +L +G + AER K
Sbjct: 384 NWLLVGFGQSIC---LPVGRKCGDCELGLRGLCKAAERKK 420
>gi|281202379|gb|EFA76584.1| putative endonuclease III [Polysphondylium pallidum PN500]
Length = 470
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 142/257 (55%), Gaps = 37/257 (14%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
HWKE + I EMR APVD G + + + +V R+HVL++ +LSSQTKD V +AA
Sbjct: 228 HWKEEWDLIAEMRGSQLAPVDWAGCETFNDNTLEDKVSRFHVLVACLLSSQTKDAVTYAA 287
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M +LK HGLT++NI TS + + L+ PV F+K KA ++K +I+K+ Y DIP
Sbjct: 288 MNKLKAHGLTVDNIIATSHETIETLLYPVSFYKRKAIYLKKIVNIMKEKYKGDIPEAYND 347
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
+ LPG+G KM +L + AWG V GI
Sbjct: 348 IMSLPGIGLKMTNLIV-QAWGRVEGIA--------------------------------- 373
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VDVH+HRI +RLGW TPE+T K L+ W+P W+E+N LLVGFGQ +C RP
Sbjct: 374 --VDVHMHRICNRLGWVNT-NTPEETTKALQDWVPRDRWAEINKLLVGFGQTVCAPTRPK 430
Query: 349 CETCLNKDLCPQGKKEL 365
CE+C LCP G + +
Sbjct: 431 CESCKINHLCPTGIQNM 447
>gi|398411994|ref|XP_003857329.1| hypothetical protein MYCGRDRAFT_34626 [Zymoseptoria tritici IPO323]
gi|339477214|gb|EGP92305.1| hypothetical protein MYCGRDRAFT_34626 [Zymoseptoria tritici IPO323]
Length = 407
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/275 (43%), Positives = 147/275 (53%), Gaps = 48/275 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+ + ++I MR APVD+MG ++ A +P RR LI+LMLSSQTKD V
Sbjct: 118 PPDWETIWSHIATMRSLNPAPVDSMGCENLAEETRSPLDRRLQTLIALMLSSQTKDPVTA 177
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AAM L+++ G +E + N DVL LI VGF K K+IK +++L+ +N DIP
Sbjct: 178 AAMKNLQDNLKGGFNLEGLLNVEPDVLNNLIAKVGFHNNKTKYIKATAELLRDKWNGDIP 237
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
TIE L LPGVGPKMA+L M+ AWG GIG
Sbjct: 238 ETIEGLVSLPGVGPKMAYLTMSSAWGRDEGIG---------------------------- 269
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRIS+ LGW K TPE TR LESWLP+ W +NHLLVGFGQ IC
Sbjct: 270 -------VDVHVHRISNLLGWHKT-NTPEQTRAALESWLPKDRWHSINHLLVGFGQMICL 321
Query: 344 SQRPSCETC-LNK-DLCPQGKKELAERVKKSPKKR 376
C C LN +LCP V SP+K+
Sbjct: 322 PVGRRCGDCDLNTHNLCPSA-------VSSSPRKK 349
>gi|384490585|gb|EIE81807.1| hypothetical protein RO3G_06512 [Rhizopus delemar RA 99-880]
Length = 322
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 141/256 (55%), Gaps = 39/256 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ V N + R +APVD MG + A P+++R+ L++LMLS+QTKD V
Sbjct: 54 PPNWEIVYNKLEAFRDIEEAPVDTMGCERLAQTTAPPKIQRFQTLVALMLSAQTKDTVTS 113
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
A M +L+ GL +E+I N L +LI VGF KA +IK ++IL+ Y+ DIP
Sbjct: 114 ATMIKLQNELPAGLNLESILNVDVTTLDQLIRSVGFHSKKAVYIKKTAEILRDQYDGDIP 173
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKM +L + AW GIG
Sbjct: 174 DTIEGLTSLPGVGPKMGYLTLQVAWNKNLGIG---------------------------- 205
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++RLGW KTPE+TR+ L+SWLP+ W ++N +LVG+GQ +C
Sbjct: 206 -------VDVHVHRITNRLGWVST-KTPEETRESLQSWLPKDKWKKINPILVGYGQIVCL 257
Query: 344 SQRPSCETCLNKDLCP 359
+ P C+ C + CP
Sbjct: 258 PRNPRCDVCPVSEYCP 273
>gi|407846292|gb|EKG02508.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 135/259 (52%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ + ++E+R+ +APVD +G + E RRYH+L++LMLS+QTKD V
Sbjct: 9 PPNWERLYVRVKELREGLEAPVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTA 68
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L G T E I E L I VGF KAKHIK A+D + K + +P++
Sbjct: 69 AAMHALIRIGCTPEVIAKMPEKTLDGFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSY 128
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPG+GPKMAHL + A G+V GIG
Sbjct: 129 EDLIALPGIGPKMAHLFLQEADGVVLGIG------------------------------- 157
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRIS R W KTPEDTRK LESWLP W E+N LLVG GQ IC +
Sbjct: 158 ----VDTHVHRISQRFLWVPSTVKTPEDTRKALESWLPRKYWGEINGLLVGLGQTICTPR 213
Query: 346 RPSCETCLNKDLCPQGKKE 364
P C C DLCP KE
Sbjct: 214 LPRCSECPASDLCPNAFKE 232
>gi|18307439|emb|CAD21502.1| related to DNA repair protein NTG1 [Neurospora crassa]
Length = 835
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 155/280 (55%), Gaps = 54/280 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+EV N ++EMR G +A VD+MG + A+ + + RR+H L++LMLSSQTKD
Sbjct: 199 PSDWEEVYNLVKEMRISGPAANAAVDSMGCERLASNNASARDRRFHTLVALMLSSQTKDT 258
Query: 164 VNHAAMGRLK----------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK E GL +EN+ VL +LI VGF K +++K A++I
Sbjct: 259 VNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNELIGKVGFHNNKTRYLKQAAEI 318
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCM--NHAWGIVTGIGKDESRQPILSPSSRQI 271
L+ YN+DIP+TIE L LPGVGPKMAHLCM ++ W V GIG
Sbjct: 319 LRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRVEGIG---------------- 362
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW KTPE+TR L+SWLP W E+
Sbjct: 363 -------------------VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEI 403
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
N LLVGFGQ +C P C + +L +G + AER K
Sbjct: 404 NWLLVGFGQSVC---LPVGRKCGDCELGLRGLCKAAERKK 440
>gi|164424761|ref|XP_960699.2| hypothetical protein NCU06654 [Neurospora crassa OR74A]
gi|157070649|gb|EAA31463.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 815
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 155/280 (55%), Gaps = 54/280 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+EV N ++EMR G +A VD+MG + A+ + + RR+H L++LMLSSQTKD
Sbjct: 179 PSDWEEVYNLVKEMRISGPAANAAVDSMGCERLASNNASARDRRFHTLVALMLSSQTKDT 238
Query: 164 VNHAAMGRLK----------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK E GL +EN+ VL +LI VGF K +++K A++I
Sbjct: 239 VNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNELIGKVGFHNNKTRYLKQAAEI 298
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCM--NHAWGIVTGIGKDESRQPILSPSSRQI 271
L+ YN+DIP+TIE L LPGVGPKMAHLCM ++ W V GIG
Sbjct: 299 LRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRVEGIG---------------- 342
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW KTPE+TR L+SWLP W E+
Sbjct: 343 -------------------VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEI 383
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
N LLVGFGQ +C P C + +L +G + AER K
Sbjct: 384 NWLLVGFGQSVC---LPVGRKCGDCELGLRGLCKAAERKK 420
>gi|388582291|gb|EIM22596.1| DNA glycosylase [Wallemia sebi CBS 633.66]
Length = 331
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 41/263 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ V + I+EMR APVD +G + + ++ +RY +L+SLMLSSQTKD V
Sbjct: 65 PENWETVYDLIKEMRSTQLAPVDTLGCERAPTENLDARTKRYQILVSLMLSSQTKDAVTS 124
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
A+ L+E GLT+E++ ++ + I VGFW+ K +++K A+ +L+ N+ D+P
Sbjct: 125 DAVNNLREQLEGGLTLESVLAATDKQIQDAIAKVGFWRRKTEYLKKAAVMLRDNFEGDVP 184
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
I+ LC LPGVGPKM L + AW GIG
Sbjct: 185 KDIDELCSLPGVGPKMGFLALQAAWNQNDGIG---------------------------- 216
Query: 284 KKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++RLGW + K PE TR LESWLP+ L +VN LLVGFGQ IC
Sbjct: 217 -------VDVHVHRITNRLGWHQPPTKQPEQTRLNLESWLPKELHRDVNKLLVGFGQTIC 269
Query: 343 KSQRPSCETC--LNKDLCPQGKK 363
P CE C +DLCP +K
Sbjct: 270 LPVGPKCEDCKLSAEDLCPSARK 292
>gi|322710098|gb|EFZ01673.1| putative DNA repair protein NTG1 [Metarhizium anisopliae ARSEF 23]
Length = 399
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 154/293 (52%), Gaps = 57/293 (19%)
Query: 92 DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRR 147
DP E T P+ W+E+ N +++MR G A VD MG + A+ +P+ +R
Sbjct: 108 DPTTGEERTS----PPSDWQEMYNAVKKMRAPGGVAHGAAVDTMGCERLADRSASPKDQR 163
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPV 197
+H LI+LMLSSQTKD VN AM RL+ GL ++N+ ++L +LI V
Sbjct: 164 FHTLIALMLSSQTKDTVNAVAMKRLQTELPPHKPGAPPGLNLDNVLAVDANLLNQLIWAV 223
Query: 198 GFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKD 257
GF K K+IK A+ IL+ + DIP+TI+ L LPGVGPKMAHLC++ AW GIG
Sbjct: 224 GFHNNKTKYIKQAAVILRDQWKGDIPDTIQGLTSLPGVGPKMAHLCLSAAWDRTEGIG-- 281
Query: 258 ESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKE 317
VDVHVHRI++ GW K K PEDTR+
Sbjct: 282 ---------------------------------VDVHVHRITNLWGWNKT-KNPEDTRRA 307
Query: 318 LESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
L+SWLP W E+N LLVGFGQ +C P C + DL G + AER K
Sbjct: 308 LQSWLPRDKWREINWLLVGFGQAVC---LPVGRKCGDCDLGLNGLCKAAERKK 357
>gi|268575464|ref|XP_002642711.1| C. briggsae CBR-NTH-1 protein [Caenorhabditis briggsae]
Length = 272
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 147/272 (54%), Gaps = 53/272 (19%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
E A W+ + I++MR APVD MG A+ P++ R+ VL++LMLSSQT+DEVN
Sbjct: 35 ENATWRRDVALIQKMRADMVAPVDTMGCHKLADPLAEPKIHRFQVLVALMLSSQTRDEVN 94
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AAM RLK+HGL+I+ I L K++ PVGF+K KA +I+ + IL+ +Y+ DIP+T
Sbjct: 95 AAAMKRLKDHGLSIQTIRAFPVSDLEKILCPVGFYKRKAVYIQQTAKILEDSYSGDIPDT 154
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ LC LPGVGPKMA+L M AWG KC
Sbjct: 155 LDGLCSLPGVGPKMANLVMQIAWG-------------------------------KC--- 180
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
W K TPE T+K LES LP S W +NHLLVGFGQ +C+
Sbjct: 181 ------------------WIKT-TTPEKTQKALESLLPRSEWQPINHLLVGFGQMLCQPV 221
Query: 346 RPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
RP C TCL + CP + E+V+K KK +
Sbjct: 222 RPKCATCLCRLTCPSSTAKTGEKVEKLAKKSR 253
>gi|412985508|emb|CCO18954.1| predicted protein [Bathycoccus prasinos]
Length = 335
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 146/273 (53%), Gaps = 49/273 (17%)
Query: 107 PAHWKEVLNNIREMRKHGD-APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+E L I++MRK+G APVD MG + A + +RY LIS MLSSQTKD++N
Sbjct: 85 PKNWEECLAKIKQMRKNGPLAPVDTMGCEKIAETSDEKQ-KRYRTLISAMLSSQTKDQIN 143
Query: 166 HAAMGRLKE-HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
HA M +L + T E I NT+ED L ++I VGF + KAK+++ A+ I + Y DIP
Sbjct: 144 HATMNKLIALNKDTAEGILNTTEDDLDEIIHQVGFHRNKAKYLRAAAKICVEKYGGDIPP 203
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
+E L +LPGVGPKM HL MN W +GI
Sbjct: 204 DLESLVELPGVGPKMGHLIMNVGWEKPSGI------------------------------ 233
Query: 285 KIPQLCVDVHVHRISHRLGWTKVF-----------KTPEDTRKELESWLPESLWSEVNHL 333
CVDVHVHRI+ RLGW +TPEDTR LE+WLP+ W E+N L
Sbjct: 234 -----CVDVHVHRITERLGWVSESCAVTNAGSPRKRTPEDTRVALENWLPKDEWVEINPL 288
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
LVGFGQ C RP C C DLC ++ A
Sbjct: 289 LVGFGQLYCTPLRPKCSECDVADLCQNAFRDAA 321
>gi|261335240|emb|CBH18234.1| endonuclease III, putative [Trypanosoma brucei gambiense DAL972]
Length = 259
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 141/266 (53%), Gaps = 36/266 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W ++ ++E+R+ APVD +G + + EVRRYH+L++LMLS+QTKD V
Sbjct: 8 PSNWSKLYAKVKEIREEVQAPVDTVGCSKLFDPSASDEVRRYHILLALMLSAQTKDHVTA 67
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L +HG T E I E L + I VGF TKA++IK A++ + + + +P +
Sbjct: 68 AAMHSLIDHGCTPETIYKMPESKLNEFISKVGFHNTKARNIKAATESILQLHKGTVPRSY 127
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPGVGPKMAHL + A +V GIG
Sbjct: 128 EGLVSLPGVGPKMAHLFLQEADSVVIGIG------------------------------- 156
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRI+ R W K+PEDTRK LE+WLP W E+N +LVG GQ IC +
Sbjct: 157 ----VDTHVHRIAQRFHWVPSTVKSPEDTRKALEAWLPAKYWGEINGMLVGLGQTICTPR 212
Query: 346 RPSCETCLNKDLCPQGKKELAERVKK 371
P C C LCP +E VK+
Sbjct: 213 IPRCSECPASGLCPSAFREAKGGVKR 238
>gi|74025410|ref|XP_829271.1| endonuclease III [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834657|gb|EAN80159.1| endonuclease III, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 259
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 141/266 (53%), Gaps = 36/266 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W ++ ++E+R+ APVD +G + + EVRRYH+L++LMLS+QTKD V
Sbjct: 8 PSNWSKLYAKVKEIREEVQAPVDTVGCSKLFDPSASDEVRRYHILLALMLSAQTKDHVTA 67
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L +HG T E I E L + I VGF TKA++IK A++ + + + +P +
Sbjct: 68 AAMHSLIDHGCTPETIYKMPESKLNEFISKVGFHNTKARNIKAATESILQLHKGTVPRSY 127
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPGVGPKMAHL + A +V GIG
Sbjct: 128 EGLVSLPGVGPKMAHLFLQEADSVVIGIG------------------------------- 156
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRI+ R W K+PEDTRK LE+WLP W E+N +LVG GQ IC +
Sbjct: 157 ----VDTHVHRIAQRFHWVPSTVKSPEDTRKALEAWLPAKYWGEINGMLVGLGQTICTPR 212
Query: 346 RPSCETCLNKDLCPQGKKELAERVKK 371
P C C LCP +E VK+
Sbjct: 213 IPRCSECPASGLCPSAFREAKGGVKR 238
>gi|296004674|ref|XP_966134.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
gi|225631743|emb|CAG25386.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
Length = 437
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 144/260 (55%), Gaps = 36/260 (13%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSS 158
D K +++ AH+ N ++EMRK APVD G D + +V R+ LIS MLSS
Sbjct: 196 DEKNVEFKRAHFLLTYNKLKEMRKDIIAPVDKYGCDKLSEKTNDMKVFRFQTLISCMLSS 255
Query: 159 QTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
+TKDEV M +LK+HGLT+ NI NT+E+ L KLI +GF+ KAK I ILK Y
Sbjct: 256 RTKDEVTAMVMDKLKKHGLTVHNILNTTEEQLKKLIYGIGFYNVKAKQILQICHILKNKY 315
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELIC 278
N+DIP+T E L KLPG+G K+A L + A GI
Sbjct: 316 NSDIPHTYEELKKLPGIGEKIAQLILQTALNKHEGIA----------------------- 352
Query: 279 VRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD+HVHRI++RL W K DT+ +L+S++ + LWSE+NH+LVGFG
Sbjct: 353 ------------VDIHVHRIANRLNWVNS-KNELDTQMKLKSYVQKELWSEINHVLVGFG 399
Query: 339 QQICKSQRPSCETCLNKDLC 358
Q ICK ++P CE C + C
Sbjct: 400 QVICKGKKPLCEKCTLTNKC 419
>gi|449543329|gb|EMD34305.1| hypothetical protein CERSUDRAFT_117182 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 148/260 (56%), Gaps = 40/260 (15%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---G 176
MR APVD MG + + + P+ +R+ LISLMLSSQTKD+V AAM +L+E
Sbjct: 1 MRSRIVAPVDTMGCEQAQLKEQDPKNQRFSTLISLMLSSQTKDQVTDAAMSKLREAVGGS 60
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
L+++ + E + I VGFW+ K ++I+ A+ L+ ++++D+P T++ LC LPGVG
Sbjct: 61 LSVDALLAADESAIADAICKVGFWRRKTQYIRQAAQRLRDDFDSDVPKTVDELCSLPGVG 120
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA L + AW + GIG VDVHVH
Sbjct: 121 PKMAFLALQVAWKLNVGIG-----------------------------------VDVHVH 145
Query: 297 RISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC-LN 354
RI++RLGW K KTPE+TR L+SWLP L E+NHLLVGFGQ IC P C+ C L+
Sbjct: 146 RITNRLGWHKPPTKTPEETRLNLQSWLPTELHPEINHLLVGFGQTICLPVGPRCDECDLS 205
Query: 355 KDLCPQGKKELAERVKKSPK 374
+ LCP +K + + KK+ K
Sbjct: 206 QGLCPSARKVVRKVTKKTVK 225
>gi|407406883|gb|EKF30968.1| endonuclease III, putative [Trypanosoma cruzi marinkellei]
Length = 251
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 135/259 (52%), Gaps = 36/259 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W+++ ++E+R+ +APVD MG + E RRYH+L++LMLS+QTKD V
Sbjct: 9 PSNWEKLYVRVKELREGLEAPVDTMGCSKLFDKSALHETRRYHILLALMLSAQTKDHVTA 68
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AAM L G T E I E L I VGF K KHIK A+D + K + +P+
Sbjct: 69 AAMQTLIRIGCTPELIAKMPEKTLDGYISKVGFHNKKTKHIKEATDAILKRHQGKVPHAY 128
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPG+GPKMAHL + A G+V GIG
Sbjct: 129 EDLIVLPGIGPKMAHLFLQEADGVVLGIG------------------------------- 157
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRI R W KTPEDTRK LESWLP W+E+N LLVG GQ IC +
Sbjct: 158 ----VDTHVHRICQRFLWVPSTVKTPEDTRKVLESWLPRKYWNEINGLLVGLGQTICTPR 213
Query: 346 RPSCETCLNKDLCPQGKKE 364
P C C DLCP KE
Sbjct: 214 FPHCSECPASDLCPNAFKE 232
>gi|402077696|gb|EJT73045.1| DNA repair protein Ntg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 585
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 139/265 (52%), Gaps = 54/265 (20%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+E+ ++EMR G DA VD MG + A+ D +P+ RR+H LI+LMLSSQTKD
Sbjct: 193 PSDWEEMYALVKEMRLTGPAKDAAVDTMGCERLASPDASPKDRRFHTLIALMLSSQTKDT 252
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK GL ++N+ VL LI VGF K K+IK A++I
Sbjct: 253 VNAVAMARLKSELPPCRDGAPAGLNLDNVLAVEPAVLNSLIYGVGFHNNKTKYIKQAAEI 312
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
L+ + DIP+TIE L LPGVGPKMAHLCM+ + W V G+G
Sbjct: 313 LRDRWAGDIPDTIEGLMSLPGVGPKMAHLCMSAPNGWDRVEGVG---------------- 356
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV----FKTPEDTRKELESWLPESLW 327
VDVHVHRI++ GW K PE TR LESWLP W
Sbjct: 357 -------------------VDVHVHRITNLWGWNASSGSPTKNPEATRAALESWLPRDRW 397
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
E+N LLVGFGQ +C C C
Sbjct: 398 REINWLLVGFGQTVCLPVGRKCGGC 422
>gi|42571353|ref|NP_973767.1| endonuclease III [Arabidopsis thaliana]
gi|222423369|dbj|BAH19657.1| AT1G05900 [Arabidopsis thaliana]
gi|332189795|gb|AEE27916.1| endonuclease III [Arabidopsis thaliana]
Length = 386
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 146/265 (55%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W++VL IR+M+ +APV+A+ D + + + P+ RR++VLI +LSSQTK+ +
Sbjct: 141 PENWEKVLEGIRKMKPSEEAPVNAVECDRTGSF-LPPKERRFYVLIGTLLSSQTKEHITG 199
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++GL T E I E + +LI PVGF+ KA ++K + I Y+ DIP T
Sbjct: 200 AAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRT 259
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+E L LPGVGPK+AHL ++ AW V GI
Sbjct: 260 LEELLSLPGVGPKIAHLVLHVAWNDVQGI------------------------------- 288
Query: 286 IPQLCVDVHVHRISHRLGWT------KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW + +PE+TR L+ WLP+ W +N LLVGFGQ
Sbjct: 289 ----CVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLVGFGQ 344
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP C TC ++CP KE
Sbjct: 345 TICTPLRPHCGTCSITEICPSAFKE 369
>gi|322698383|gb|EFY90154.1| putative DNA repair protein NTG1 [Metarhizium acridum CQMa 102]
Length = 399
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 151/278 (54%), Gaps = 53/278 (19%)
Query: 107 PAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+E+ N +++MR G A VD MG + A+ + +P+ +R+H LI+LMLSSQTKD
Sbjct: 119 PSDWQEMYNAVKKMRAPGGVAHGAAVDTMGCERLADRNASPKDQRFHTLIALMLSSQTKD 178
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
VN AM RL+ GL ++N+ ++L +LI VGF K K+IK A+
Sbjct: 179 TVNAVAMKRLQTELPPHKPGAPPGLNLDNVLAVDANLLNELIWAVGFHNNKTKYIKQAAV 238
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL+ + DIP+TIE L LPGVGPKMAHLC++ AW GIG
Sbjct: 239 ILRDKWKGDIPDTIEGLTSLPGVGPKMAHLCLSAAWDRTEGIG----------------- 281
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNH 332
VDVHVHRI++ GW K K PE+TR+ L+SWLP W E+N
Sbjct: 282 ------------------VDVHVHRITNLWGWNKT-KNPEETRRALQSWLPRDKWREINW 322
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
LLVGFGQ +C P C + DL G + AER K
Sbjct: 323 LLVGFGQAVC---LPVGRRCGDCDLGLSGLCKAAERKK 357
>gi|452848386|gb|EME50318.1| hypothetical protein DOTSEDRAFT_68994 [Dothistroma septosporum
NZE10]
Length = 420
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 150/276 (54%), Gaps = 48/276 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W++V + EMRK APVD MG + A +P +R L+SLMLSSQTKD V
Sbjct: 116 PTNWEKVYSITAEMRKKVLAPVDTMGCESLAETTRSPRDQRLQTLVSLMLSSQTKDTVTA 175
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AA+ ++E+ G T++++ + S + L LI VGF K K +K + IL++ ++ DIP
Sbjct: 176 AAIRNMQENLPGGFTLQSLIDVSPEDLNNLISKVGFHNNKTKFLKSVAVILREKFDGDIP 235
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 236 DTIEGLISLPGVGPKMAYLCMSAAWGRDEGIG---------------------------- 267
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ W K TPE TR ELESWLP+ W ++NHLLVGFGQ IC
Sbjct: 268 -------VDVHVHRITNLWKWHKT-STPEQTRAELESWLPKEKWHDINHLLVGFGQTICL 319
Query: 344 SQRPSCETC--LNKDLCPQGKKELAERVKKSPKKRK 377
C+ C + LCP V SP+KRK
Sbjct: 320 PVGRRCDECELSVQKLCPSA-------VAGSPRKRK 348
>gi|146078123|ref|XP_001463464.1| putative endonuclease III [Leishmania infantum JPCM5]
gi|398010980|ref|XP_003858686.1| endonuclease III, putative [Leishmania donovani]
gi|134067550|emb|CAM65829.1| putative endonuclease III [Leishmania infantum JPCM5]
gi|322496896|emb|CBZ31966.1| endonuclease III, putative [Leishmania donovani]
Length = 258
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 140/264 (53%), Gaps = 38/264 (14%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-EVRRYHVLISLMLSSQTKDEVN 165
P++W ++ + + RKH APVD MG H + AP EV+R+H L++LMLS+QTKD V
Sbjct: 9 PSNWAQLFARLEDYRKHLKAPVDTMGC-HRLRDEYAPKEVQRFHTLVALMLSAQTKDVVT 67
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AAM L +HGLT +++ +E L K I VGF KAK+IK + IL KNY+ ++P
Sbjct: 68 AAAMDTLIKHGLTAQSVHAMTETELDKHICKVGFHNKKAKNIKEVAAILMKNYDGEVPRE 127
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
L LPGVGPKMA+L A V GIG
Sbjct: 128 YAELIALPGVGPKMANLFFQDADHRVIGIG------------------------------ 157
Query: 286 IPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKS 344
VD HVHRIS R W KTPEDTRK LESWLP W +N L+VG GQ +C
Sbjct: 158 -----VDTHVHRISQRYRWVPSTVKTPEDTRKALESWLPREHWGTINSLMVGLGQTVCTP 212
Query: 345 QRPSCETCLNKDLCPQGKKELAER 368
RP C C D+CP KE ++
Sbjct: 213 LRPKCGICELSDICPNAFKETQQK 236
>gi|70934485|ref|XP_738462.1| endonuclease III [Plasmodium chabaudi chabaudi]
gi|56514702|emb|CAH82012.1| endonuclease iii homologue, putative [Plasmodium chabaudi chabaudi]
Length = 272
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 156/286 (54%), Gaps = 39/286 (13%)
Query: 73 KSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMG 132
KS++ ++ + +QN +ENDT+ K + N I+EMRK+ DAPVD G
Sbjct: 6 KSDRTKRKLIKSEQNDEVTKNFKNENDTETKK---KMFLITYNKIKEMRKNIDAPVDKYG 62
Query: 133 WDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGK 192
+ ++ R+ LIS +LSS+TKDEV M RLK+HGLT+ENI NT E+ L K
Sbjct: 63 CHMLSEKTDDLKIFRFQTLISCLLSSRTKDEVTAMVMDRLKKHGLTVENILNTPEEELKK 122
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
LI +GF+ K+K I ILK+ YN+DIP++ E L KLPG+G K++ L + A
Sbjct: 123 LIYGIGFYNVKSKQIIQICKILKEKYNSDIPHSYEELMKLPGIGEKVSQLILQTALNKHE 182
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPE 312
GI VD+HVHRIS+RL W K
Sbjct: 183 GIA-----------------------------------VDIHVHRISNRLNWVYT-KNES 206
Query: 313 DTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
DT+ +L+S++ + LWSE+NHLLVGFGQ ICK ++P CE C D C
Sbjct: 207 DTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEKCTITDYC 252
>gi|297843388|ref|XP_002889575.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
gi|297335417|gb|EFH65834.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 144/265 (54%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +WK+VL I++M+ +AP +A+ D + + + P+ RR++VLI +LSSQTK+ +
Sbjct: 139 PENWKKVLEGIQKMKSSEEAPANAVECDRTGSF-LPPKERRFYVLIGTLLSSQTKEHITG 197
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++GL T E I E + +LI PVGF+ KA ++K + I Y+ DIP T
Sbjct: 198 AAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMKYDGDIPRT 257
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+E L LPGVGPK+AHL ++ AW V GI
Sbjct: 258 LEELLSLPGVGPKIAHLVLHVAWNDVQGI------------------------------- 286
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW T PE+TR L+ WLP+ W +N LLVGFGQ
Sbjct: 287 ----CVDTHVHRICNRLGWVSKPGTKQKTLSPEETRVALQQWLPKEEWVAINFLLVGFGQ 342
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP C TC +LCP KE
Sbjct: 343 TICTPLRPRCGTCSITELCPSAFKE 367
>gi|389628416|ref|XP_003711861.1| DNA repair protein Ntg1 [Magnaporthe oryzae 70-15]
gi|351644193|gb|EHA52054.1| DNA repair protein Ntg1 [Magnaporthe oryzae 70-15]
gi|440470899|gb|ELQ39938.1| DNA base excision repair N-glycosylase 1 [Magnaporthe oryzae Y34]
gi|440486070|gb|ELQ65970.1| DNA base excision repair N-glycosylase 1 [Magnaporthe oryzae P131]
Length = 449
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 139/261 (53%), Gaps = 51/261 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+E+ ++EMR G +A VD MG + A+ D +P RR+H L++LMLSSQTKD
Sbjct: 132 PSDWEEMYGLVKEMRISGPAANAAVDTMGCERLASEDASPRDRRFHTLVALMLSSQTKDT 191
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK+ GL +EN+ +L +LI VGF K K+IK A+ I
Sbjct: 192 VNAVAMARLKKELPPFEEGAPPGLNLENVLAVEPALLNELIWQVGFHNNKTKYIKQAAVI 251
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
L+ YN+DIP+TI L LPGVGPKMAHLCM+ + W V GIG
Sbjct: 252 LRDKYNSDIPDTIAGLTSLPGVGPKMAHLCMSAPNGWNRVEGIG---------------- 295
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVN 331
VDVHVHRI++ GW K PE TR LESWLP W E+N
Sbjct: 296 -------------------VDVHVHRITNLWGWNKT-NNPEATRAALESWLPRDRWREIN 335
Query: 332 HLLVGFGQQICKSQRPSCETC 352
LLVG GQ +C C C
Sbjct: 336 WLLVGLGQTVCLPVGRKCGDC 356
>gi|336262434|ref|XP_003346001.1| base-excision repair protein [Sordaria macrospora k-hell]
gi|380089594|emb|CCC12476.1| putative nuclear and mitochondrial base-excision repair protein
[Sordaria macrospora k-hell]
Length = 805
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 143/262 (54%), Gaps = 51/262 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+EV ++EMR G +A VD MG + A+ + + RR+H L++LMLSSQTKD
Sbjct: 167 PSDWEEVYRLVKEMRISGPAANAAVDTMGCERLASNNASARDRRFHTLVALMLSSQTKDT 226
Query: 164 VNHAAMGRLK----------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RLK E GL +EN+ +L +LI VGF K K++K A++I
Sbjct: 227 VNAEAMLRLKKELPPHTEGAEPGLNLENMLAVEPTLLNELIGKVGFHNNKTKYLKQAAEI 286
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
L+ YN+DIP+TIE L LPGVGPKMAHLCM+ + W V GIG
Sbjct: 287 LRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSAENGWNRVEGIG---------------- 330
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW KTPE+TR L+SWLP W E+
Sbjct: 331 -------------------VDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEI 371
Query: 331 NHLLVGFGQQICKSQRPSCETC 352
N LLVGFGQ +C C C
Sbjct: 372 NWLLVGFGQSVCLPVGRKCGDC 393
>gi|409082861|gb|EKM83219.1| hypothetical protein AGABI1DRAFT_33588 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 335
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 154/293 (52%), Gaps = 49/293 (16%)
Query: 76 KLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDH 135
K K LLKK +P + +P +W+ V + I+EMR H AP D MG +
Sbjct: 33 KAAKSALLKKTAAAGVITLPGQ--------QPENWRTVYDTIKEMRSHFTAPADTMGCEQ 84
Query: 136 SANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGK 192
S + + P+ R+ L+ LMLSSQTKDE+ AA+ +LK L+I+ I + E +
Sbjct: 85 SKHKENDPKNSRFTTLVYLMLSSQTKDEITDAAVTKLKAAVGGTLSIDAIVSAEESTVSA 144
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
I VGFW+ KA +IK + L ++++D+P T++ LC LPGVGPKMA L ++ AW I T
Sbjct: 145 AINKVGFWRRKAGYIKQTAQRLLHDFDSDVPKTVKELCSLPGVGPKMAILALHVAWDINT 204
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTP 311
GIG VD HVHRI++ LGW K K+
Sbjct: 205 GIG-----------------------------------VDSHVHRITNLLGWYNKPTKSA 229
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGK 362
E+TR L+SWLP E+N LLVGFGQ IC +P C+TC + LCP +
Sbjct: 230 EETRLSLQSWLPAEFHREINGLLVGFGQVICLPTKPRCDTCELSARGLCPNAR 282
>gi|406868323|gb|EKD21360.1| HhH-GPD superfamily base excision DNA repair protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 441
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 144/277 (51%), Gaps = 52/277 (18%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P W+EV N ++EMR G +A VD MG + + P V+RYH L +LMLSSQTKD
Sbjct: 120 PNDWREVYNTVKEMRTTGAAQNAAVDTMGCERLGQETVTPLVKRYHTLTALMLSSQTKDT 179
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
N AM RL GL +ENI +L +LI VGF K K+IK ++I
Sbjct: 180 TNAQAMNRLYTELPAYKEGAPVGLNLENILAVDPKLLNELIWAVGFHNNKTKYIKATAEI 239
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+ YN DIP+TIE L LPGVGPKM +LC++ AWG GIG
Sbjct: 240 LRDQYNGDIPDTIEGLMSLPGVGPKMGYLCLSAAWGKHEGIG------------------ 281
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K K PE +R L+SWLP+ LW E+N +
Sbjct: 282 -----------------VDVHVHRITNLWGWHKT-KGPEQSRIALQSWLPKELWHEINWV 323
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
LVG GQ IC C C +L +G + AER K
Sbjct: 324 LVGLGQTICLPVGRKCGEC---ELGLKGLCKAAERGK 357
>gi|296415754|ref|XP_002837551.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633423|emb|CAZ81742.1| unnamed protein product [Tuber melanosporum]
Length = 459
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 139/256 (54%), Gaps = 40/256 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+EV +REMRK APVD MG + + P++RR+H LISLMLSSQTKD +N
Sbjct: 158 PENWEEVYEKLREMRKKVKAPVDTMGCERLGDKAATPKLRRFHTLISLMLSSQTKDTINA 217
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM L+E GL +E+I L +LI VGF K ++IK A+ I++ + DIP
Sbjct: 218 VAMKGLREQLPGGLCLESILEVEPKRLDELIRIVGFHNRKTEYIKKAAVIIRDKHGGDIP 277
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+T E L LPGVGPKMAHLC++ AW GIG
Sbjct: 278 DTFEGLTALPGVGPKMAHLCLSAAWDRTEGIG---------------------------- 309
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI + W K TPE TR+ L++WLP W E+N LLVGFGQ IC
Sbjct: 310 -------VDVHVHRICNLWDWVKT-TTPEGTREALQAWLPRDKWREINFLLVGFGQTICL 361
Query: 344 SQRPSCETC-LNKDLC 358
+ C C L+ LC
Sbjct: 362 PRGRKCGECALSSGLC 377
>gi|359478121|ref|XP_002264475.2| PREDICTED: endonuclease III-like protein 1-like [Vitis vinifera]
Length = 355
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 147/265 (55%), Gaps = 43/265 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+++L IR+MR DAPVD+MG + A + P RR+ VL+S +LSSQTKD V H
Sbjct: 110 PANWEKILEGIRKMRSSEDAPVDSMGCEK-AGSSLPPRERRFAVLVSSLLSSQTKDNVTH 168
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGK-LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
A+ RL ++GL + + + +++ K LI PVGF+ KA ++K + I Y+ DIP++
Sbjct: 169 GAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRKAGNLKKIAKICLMKYDGDIPSS 228
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+E L LPG+GPKMAHL MN AW V GI
Sbjct: 229 LEELLLLPGIGPKMAHLVMNVAWNNVQGI------------------------------- 257
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEVNHLLVGFGQ 339
CVD HVHRI +RLGW T PE+TR+ L+ WLP+ W +N LLVGFGQ
Sbjct: 258 ----CVDTHVHRICNRLGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINPLLVGFGQ 313
Query: 340 QICKSQRPSCETCLNKDLCPQGKKE 364
IC RP C C DLCP KE
Sbjct: 314 TICTPLRPRCGVCGVSDLCPSAFKE 338
>gi|157864920|ref|XP_001681168.1| putative endonuclease III [Leishmania major strain Friedlin]
gi|68124463|emb|CAJ02303.1| putative endonuclease III [Leishmania major strain Friedlin]
Length = 257
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/266 (41%), Positives = 141/266 (53%), Gaps = 38/266 (14%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-EVRRYHVLISLMLSSQ 159
K++ P++W ++ + + RKH APVD MG H + AP EV+R+H L++LMLS+Q
Sbjct: 3 KRSFTPPSNWAQLFARLEDYRKHLKAPVDTMGC-HRLRDETAPKEVQRFHTLVALMLSAQ 61
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKD V AAM L + LT++++ +E L K I VGF TKA++IK + IL KNY+
Sbjct: 62 TKDVVTAAAMDTLIKRELTVQSVHAMTETELDKHICKVGFHNTKARNIKEVAAILMKNYD 121
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
+P L LPGVGPKMA+L A V GIG
Sbjct: 122 GKVPREYAELIALPGVGPKMANLFFQDADHRVIGIG------------------------ 157
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD HVHRIS R W KTPEDTRK LESWLP W +N L+VG G
Sbjct: 158 -----------VDTHVHRISQRYRWVPSTVKTPEDTRKALESWLPREHWGTINSLMVGLG 206
Query: 339 QQICKSQRPSCETCLNKDLCPQGKKE 364
Q +C RP C+ C D+CP KE
Sbjct: 207 QTVCTPLRPKCDICELSDICPNAFKE 232
>gi|380488747|emb|CCF37167.1| HhH-GPD superfamily base excision DNA repair protein
[Colletotrichum higginsianum]
Length = 439
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 151/283 (53%), Gaps = 52/283 (18%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+ + + +++MR HG +A VD MG + + D + RR+H+LI+LMLSSQTKD
Sbjct: 166 PSDWEAMYDAVKQMRLHGTARNAAVDTMGCERLFDPDASERDRRFHILIALMLSSQTKDT 225
Query: 164 VNHAAMGRL----------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AMGRL GL +EN+ VL +LI VGF K K+IK +++I
Sbjct: 226 VNAVAMGRLMAELPPHEPGAAGGLNLENVLAVEPAVLNELIWAVGFHNNKTKYIKASAEI 285
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+ ++ DIP+TIE L LPGVGPKMA+LC++ AW GIG
Sbjct: 286 LRDKFDGDIPDTIEGLTSLPGVGPKMAYLCLSAAWDRTEGIG------------------ 327
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K + PE TR L+ WLP + W E+N L
Sbjct: 328 -----------------VDVHVHRITNLWGWHKTTQ-PEATRLALQGWLPRNRWREINWL 369
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
LVGFGQ +C C C +L +G AER K + +R
Sbjct: 370 LVGFGQTVCLPVGRKCGDC---ELGLRGMCRAAERKKVNEGRR 409
>gi|328867595|gb|EGG15977.1| putative endonuclease III [Dictyostelium fasciculatum]
Length = 405
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 134/252 (53%), Gaps = 36/252 (14%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
W+E + I +MR APVD +G D + + P+V R+H L+ MLSSQT+DE +A M
Sbjct: 158 WEETWDLIHQMRLALPAPVDNLGCDSFNDDKLDPKVSRFHTLVGCMLSSQTRDEQTYACM 217
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RL++HGLTIEN+ + D L KLI PV F+K KA ++K I++ Y DIP + L
Sbjct: 218 NRLRKHGLTIENVLASDTDTLEKLIYPVSFYKRKADYLKRICIIMRDKYKGDIPPNFKEL 277
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
+LPG+G KM +L + AWG GI
Sbjct: 278 LELPGIGQKMTNLIVQVAWGRTEGIA---------------------------------- 303
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
+DVH+HRI++RLGW +TP+ T L+ WLP W +N LLVGFGQ C RP C
Sbjct: 304 -IDVHMHRIANRLGWVHT-ETPDKTEIALKEWLPFERWDGINKLLVGFGQTTCTPLRPKC 361
Query: 350 ETCLNKDLCPQG 361
+ C LCP G
Sbjct: 362 QNCKVNHLCPTG 373
>gi|150864007|ref|XP_001382677.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
gi|149385263|gb|ABN64648.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
Length = 382
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 152/294 (51%), Gaps = 60/294 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVR-------RYHVLISLMLSSQ 159
P +W ++ N I MR PVD G + N I P VR R+ +LISLMLSSQ
Sbjct: 114 PKNWYKIYNEIVTMRSKISTPVDTQGCERMPN-SINPNVRTRNPRIYRFQLLISLMLSSQ 172
Query: 160 TKDEVNHAAMGRLKE--------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
TKDEVN+ AM + E GL IE + +E L I VGF KA +IK A
Sbjct: 173 TKDEVNYLAMKTMHEGLLANGYKDGLCIEALLELTEKELDDYICKVGFHNRKAGYIKRAC 232
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
++L+ N+ +DIP+TIE + LPGVGPKM +L + +AWGI +GIG
Sbjct: 233 EMLRDNFQSDIPSTIEDVVTLPGVGPKMGYLLLQNAWGINSGIG---------------- 276
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEV 330
VDVH+HR++ WT K KTPE TR ELE WLP W+++
Sbjct: 277 -------------------VDVHLHRLAQMWSWTSKNAKTPEHTRVELEDWLPPKYWADI 317
Query: 331 NHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA------ERVKKSPKKR 376
N LLVGFGQ IC + P+C+ C LC KK L ER+KK K+R
Sbjct: 318 NPLLVGFGQTICVPRAPNCDICTLATTGLCKASKKSLLKTPITDERLKKLNKQR 371
>gi|6850320|gb|AAF29397.1|AC009999_17 Contains similarity to an endonuclease III homolog from Homo
sapiens gb|U81285, and contains an Endonuclease III
PF|00730 domain [Arabidopsis thaliana]
Length = 402
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 148/281 (52%), Gaps = 59/281 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W++VL IR+M+ +APV+A+ D + + + P+ RR++VLI +LSSQTK+ +
Sbjct: 141 PENWEKVLEGIRKMKPSEEAPVNAVECDRTGSF-LPPKERRFYVLIGTLLSSQTKEHITG 199
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++GL T E I E + +LI PVGF+ KA ++K + I Y+ DIP T
Sbjct: 200 AAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRT 259
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+E L LPGVGPK+AHL ++ AW V GI
Sbjct: 260 LEELLSLPGVGPKIAHLVLHVAWNDVQGI------------------------------- 288
Query: 286 IPQLCVDVHVHRISHRLGW-----TKVF-----------------KTPEDTRKELESWLP 323
CVD HVHRI +RLGW TK F +PE+TR L+ WLP
Sbjct: 289 ----CVDTHVHRICNRLGWVSKPGTKQFAYLLLVTYLYFVLDQKTSSPEETRVALQQWLP 344
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
+ W +N LLVGFGQ IC RP C TC ++CP KE
Sbjct: 345 KGEWVAINFLLVGFGQTICTPLRPHCGTCSITEICPSAFKE 385
>gi|428671556|gb|EKX72474.1| endonuclease III family member protein [Babesia equi]
Length = 666
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 143/261 (54%), Gaps = 37/261 (14%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
++ V N I +MR+ DAPVD MG H P + L++ MLSSQTKD+V
Sbjct: 443 NFANVWNAIVDMRQKKDAPVDTMG-AHCLADSPDPATYEFQTLVACMLSSQTKDQVTAQT 501
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M LK+ GLT+++I SE+ L LI VGF TKAK+IK + I+ + + +P+T+E
Sbjct: 502 MDVLKKRGLTLDSIMEISEEELDTLISRVGFHNTKAKNIKKTATIIHEKFGGRVPDTMEE 561
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L LPGVGPKMA+L + A+ K+I
Sbjct: 562 LVSLPGVGPKMANLVIQLAF-----------------------------------KRIDG 586
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
+ VD+HVHRIS+RLGW K KTP++TR +L+ +P+ LW+EVNHLLVGFGQ IC + P
Sbjct: 587 ISVDLHVHRISNRLGWVKT-KTPDETRLQLQELIPQKLWAEVNHLLVGFGQTICTAAGPG 645
Query: 349 CETCLNKDLCPQGKKELAERV 369
C TC CP G L V
Sbjct: 646 CATCGANKWCPTGIANLKRGV 666
>gi|213408176|ref|XP_002174859.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
gi|212002906|gb|EEB08566.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
Length = 361
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 149/278 (53%), Gaps = 43/278 (15%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP +W+EV I+ M+ APVD MG H+ P+V R L++LMLSSQTKD V
Sbjct: 52 EPKNWREVYGQIKAMKSKIIAPVDNMGC-HTLADRKDPKVFRLQTLVALMLSSQTKDTVL 110
Query: 166 HAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
M LKE+ GLT+E + E L LI VGF KA ++K + ILK+ Y+ DI
Sbjct: 111 GPTMKNLKENMPKGLTVEGLEAIDEKELNILIEKVGFHNRKAMYLKKTAKILKEKYDGDI 170
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P+TIE L +LPGVGPKM +LC+ AW + GIG
Sbjct: 171 PDTIEGLMELPGVGPKMGYLCLGVAWNKIDGIG--------------------------- 203
Query: 283 EKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRIS+ LGW KT E TR L+SWLP+ LW +VNH+LVGFGQ IC
Sbjct: 204 --------VDVHVHRISNLLGWVHT-KTEEQTRLALQSWLPKELWLDVNHMLVGFGQMIC 254
Query: 343 KSQRPSCETC--LNKDLCPQGKKELAERVKKSPKKRKS 378
+ C+ C +LCP E R+ K KK ++
Sbjct: 255 LPRGRRCDICTLAENNLCPSAFTE-NSRISKQSKKGQA 291
>gi|47223872|emb|CAG06049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 293
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 115/159 (72%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K WEP W++ L IR MR DAPVD MG D + D +V+R+ VL+SLMLSSQT
Sbjct: 22 KTEHWEPPDWEKQLGYIRAMRSSRDAPVDNMGADKCYDSDAPAQVKRFQVLVSLMLSSQT 81
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AAM +L+ HG T+ENI T+E+ LG+LI PVGFW+ KA+++K+ S +L+ +
Sbjct: 82 KDQVTSAAMRKLRAHGCTVENILATNEETLGRLIYPVGFWRNKARYLKLTSAMLQTEFGG 141
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
DIP+++E L +LPGVGPKMAHL M+ AWG V+GIG+D S
Sbjct: 142 DIPDSVEGLVRLPGVGPKMAHLAMDIAWGQVSGIGRDAS 180
>gi|396486084|ref|XP_003842328.1| similar to TPA: DNA repair protein Ntg1 [Leptosphaeria maculans
JN3]
gi|312218904|emb|CBX98849.1| similar to TPA: DNA repair protein Ntg1 [Leptosphaeria maculans
JN3]
Length = 423
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 138/260 (53%), Gaps = 41/260 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W+E+ REMR APVD MG + A + +P RR+ LI+LMLSSQTKD V
Sbjct: 134 PSNWEEIYALTREMRHENIAPVDTMGCESLAEKNRSPRDRRFQTLIALMLSSQTKDTVTA 193
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM ++E G +E++ L I VGF K K+IK ++IL+ +N+DIP
Sbjct: 194 VAMRSMQEGIPGGFNLESVLALEPAALNAFICKVGFHNLKTKYIKQTAEILRDKWNSDIP 253
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+T+E L LPGVGPKMA+L ++ AWG GIG
Sbjct: 254 DTVEGLISLPGVGPKMAYLTLSAAWGRDEGIG---------------------------- 285
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K + PE TR LESWLP W ++N+LLVGFGQ IC
Sbjct: 286 -------VDVHVHRITNLWGWHKT-QNPEQTRAALESWLPRDKWHDINNLLVGFGQTICL 337
Query: 344 SQRPSCETC--LNKDLCPQG 361
C C ++ LCP
Sbjct: 338 PVGRKCGECKLADRGLCPSA 357
>gi|451845583|gb|EMD58895.1| hypothetical protein COCSADRAFT_203977 [Cochliobolus sativus
ND90Pr]
Length = 419
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 137/260 (52%), Gaps = 41/260 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+E+ REMR APVD MG + A+ P +R+ LI+LMLSSQTKD V
Sbjct: 132 PANWEEIYALTREMRNENAAPVDTMGCESLADRSRTPRDQRFQTLIALMLSSQTKDTVTA 191
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
+ ++E G +E++ L I VGF K K+IK ++IL+ +N+DIP
Sbjct: 192 PVIWGMQERMPGGFNLESVLALEPTELNGFINKVGFHNLKTKYIKQTAEILRDKWNSDIP 251
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKMAHL M+ AWG GIG
Sbjct: 252 DTIEGLVSLPGVGPKMAHLTMSAAWGRTEGIG---------------------------- 283
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K + PE TR LESWLP+ W ++N+LLVGFGQ IC
Sbjct: 284 -------VDVHVHRITNLWGWHKT-QQPEQTRAALESWLPKEKWHDINNLLVGFGQTICL 335
Query: 344 SQRPSCETC--LNKDLCPQG 361
C C ++ LCP
Sbjct: 336 PVGRKCGDCKLADRGLCPSA 355
>gi|367036841|ref|XP_003648801.1| hypothetical protein THITE_2106660 [Thielavia terrestris NRRL 8126]
gi|346996062|gb|AEO62465.1| hypothetical protein THITE_2106660 [Thielavia terrestris NRRL 8126]
Length = 465
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 167/331 (50%), Gaps = 63/331 (19%)
Query: 63 KTQNKKNT-----LYKSEKLGKRTLLKKQNVHNKDPIPDEND--TKKTKWEP-AHWKEVL 114
KTQ K T L E LG + K + K P D T +TK EP + W+EV
Sbjct: 101 KTQVKTETKTEHELDAGEDLGAKPTPKPRGRARK-PARKTTDATTGETKVEPPSDWEEVY 159
Query: 115 NNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
++EMR G +A VD MG + A D + RR+ L++LMLSSQTKD VN AM R
Sbjct: 160 RLVKEMRLTGPAANAAVDTMGCERLARPDASARDRRFQTLVALMLSSQTKDTVNAEAMAR 219
Query: 172 LKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
L GL +EN+ +L +LI VGF K K++K + IL+ ++ +D
Sbjct: 220 LHNELPPHKPGAPPGLNLENMLAVDPALLNELIGKVGFHNNKTKYLKQTASILQSDFASD 279
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHA--WGIVTGIGKDESRQPILSPSSRQISRSELICV 279
IP T+ LC LPGVGPKMAHLCM+ A WG V G+G
Sbjct: 280 IPPTVAGLCSLPGVGPKMAHLCMSAANGWGRVEGVG------------------------ 315
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VDVHVHRI++ GW +TPE+TR+ LE+WLP W E+N LLVGFGQ
Sbjct: 316 -----------VDVHVHRITNLWGW-HATRTPEETRRALEAWLPRDRWREINWLLVGFGQ 363
Query: 340 QICKSQRPSCETCLNKDLCPQGKKELAERVK 370
+C P C + +L +G AER K
Sbjct: 364 TVC---LPVGRRCGDCELGLRGLCRAAERGK 391
>gi|310796892|gb|EFQ32353.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 469
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 148/283 (52%), Gaps = 52/283 (18%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+ + + ++ MR HG +A VD MG + + D + RRYH+L +LMLSSQTKD
Sbjct: 145 PSDWESIYDAVKRMRLHGAARNAAVDTMGCERLFHPDASERDRRYHLLTALMLSSQTKDT 204
Query: 164 VNHAAMGRL----------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RL GL +EN+ L +LI VGF K K+IK A++I
Sbjct: 205 VNAVAMKRLMTELPPHEPGAAGGLNLENVLAVDPAFLNELIWAVGFHNNKTKYIKAAAEI 264
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+ ++ DIP+TIE L LPGVGPKMA+LC++ AW GIG
Sbjct: 265 LRDRFDGDIPDTIEGLTSLPGVGPKMAYLCLSAAWDRTEGIG------------------ 306
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K + PE TR L+SWLP+ W E+N L
Sbjct: 307 -----------------VDVHVHRITNLWGWHKTTQ-PEATRLALQSWLPKDKWREINWL 348
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
LVGFGQ +C C C DL G + AER K + +R
Sbjct: 349 LVGFGQTLCLPVGRKCGEC---DLGLSGMCKAAERKKVNEGRR 388
>gi|342887581|gb|EGU87063.1| hypothetical protein FOXB_02457 [Fusarium oxysporum Fo5176]
Length = 399
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 156/296 (52%), Gaps = 58/296 (19%)
Query: 100 TKKTKWEP-AHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISL 154
T +TK EP + W+ V + +R+MR G A VD MG + A+ + +P+ +R+H L++L
Sbjct: 111 TGETKMEPPSDWEAVYDTVRKMRAPGGRAYGAAVDTMGCERLADRNASPKDQRFHTLVAL 170
Query: 155 MLSSQTKDEVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKA 204
MLSSQTKD VN M R++ GL + NI +L + I VGF K
Sbjct: 171 MLSSQTKDTVNAVVMKRMQTELPPFEPGAPPGLNLNNILAIDPKLLNEFIWAVGFHNNKT 230
Query: 205 K----HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESR 260
K +IK ++IL+ ++ DIPNTIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 231 KFVTRYIKQTAEILRDKWDGDIPNTIEGLVSLPGVGPKMAYLCMSVAWGKHLGIG----- 285
Query: 261 QPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELES 320
VDVHVHRI++ GW K K PE+TR L+S
Sbjct: 286 ------------------------------VDVHVHRITNLWGWHKT-KNPEETRTTLQS 314
Query: 321 WLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
WLP+ W E+NHLLVG GQ +C C C DL +G + A+R K S ++
Sbjct: 315 WLPQDRWHEINHLLVGLGQSVCLPVGRKCGEC---DLGLEGLCKAADRAKVSAGRQ 367
>gi|451998140|gb|EMD90605.1| hypothetical protein COCHEDRAFT_1179590 [Cochliobolus
heterostrophus C5]
Length = 420
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 137/260 (52%), Gaps = 41/260 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+E+ REMR APVD MG + A+ P +R+ LI+LMLSSQTKD V
Sbjct: 132 PANWEEIYALTREMRNENAAPVDTMGCESLADRSQTPRDQRFQTLIALMLSSQTKDTVTA 191
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
+ ++E G +E++ L I VGF K K+IK ++IL+ +N+DIP
Sbjct: 192 PVIWGMQERMPGGFNLESVLALDPTELNGYINKVGFHNLKTKYIKQTAEILRDKWNSDIP 251
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKMAHL M+ AWG GIG
Sbjct: 252 DTIEGLVSLPGVGPKMAHLTMSAAWGRTEGIG---------------------------- 283
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K + PE TR LESWLP+ W ++N+LLVGFGQ IC
Sbjct: 284 -------VDVHVHRITNLWGWHKT-QQPEQTRAALESWLPKEKWHDINNLLVGFGQTICL 335
Query: 344 SQRPSCETC--LNKDLCPQG 361
C C ++ LCP
Sbjct: 336 PVGRKCGDCKLADRGLCPSA 355
>gi|449303226|gb|EMC99234.1| hypothetical protein BAUCODRAFT_31576 [Baudoinia compniacensis UAMH
10762]
Length = 437
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 141/277 (50%), Gaps = 48/277 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+ V + MRK APVD MG + A P RR L+SLMLSSQTKD V
Sbjct: 146 PPNWERVYDVTAAMRKRVLAPVDTMGCESLAEDHKPPRDRRLQTLVSLMLSSQTKDTVTA 205
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM L+++ G +E++ + L +LI VGF K IK + IL+ Y+ DIP
Sbjct: 206 VAMRNLQQNLPGGFCLESLLKVEPEQLNELIGKVGFHNNKTTFIKKVAVILRDQYDGDIP 265
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 266 DTIEGLVSLPGVGPKMAYLCMSAAWGRDEGIG---------------------------- 297
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K TPE TR ELE+WLP W ++NHLLVGFGQ IC
Sbjct: 298 -------VDVHVHRITNLWGWHKT-STPEQTRAELEAWLPRDKWHDINHLLVGFGQTICV 349
Query: 344 SQRPSCETC--LNKDLCPQGKKELAERVKKSPKKRKS 378
C C + LCP V +P KRK+
Sbjct: 350 PVGRRCGECDLAKEGLCPSA-------VASNPVKRKA 379
>gi|302914726|ref|XP_003051196.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
gi|256732134|gb|EEU45483.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
Length = 439
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 149/282 (52%), Gaps = 57/282 (20%)
Query: 107 PAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+ + + +R+MR G A VD MG + A+ +P+ +R+H L++LMLSSQTKD
Sbjct: 137 PSDWEAMYDVVRKMRAPGGRAHGAAVDTMGCERLADRSASPKDQRFHTLVALMLSSQTKD 196
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAK----HIK 208
VN M RL+ GL +ENI +L + I VGF K K +IK
Sbjct: 197 TVNAVVMKRLQTELPSYKQGAPVGLNLENILAVEPKLLNEFIWQVGFHNNKTKSACPYIK 256
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A++I++ +N DIP+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 257 QAAEIIRDKWNGDIPDTIEGLTSLPGVGPKMAYLCMSVAWGRTEGIG------------- 303
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VDVHVHRI++ GW K K PE+TR L+SWLP+ W
Sbjct: 304 ----------------------VDVHVHRITNLWGWNKT-KNPEETRAALQSWLPKDRWH 340
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
E+NHLLVG GQ +C C C DL +G + A+R K
Sbjct: 341 EINHLLVGLGQSVCLPVGRKCGEC---DLGMEGLCKAADRKK 379
>gi|355756457|gb|EHH60065.1| Endonuclease III-like protein 1 [Macaca fascicularis]
Length = 245
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 126/259 (48%), Gaps = 76/259 (29%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+
Sbjct: 60 WEPQDWQQQLVNIRAMRSEKDAPVDHLGVEHCYDSSAPPK-------------------- 99
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 100 --------------------TDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 139
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 140 SVAELVALPGVGPKMAHLAMAVAWGTVSGIA----------------------------- 170
Query: 285 KIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI++RL WTK K+PE+TR LE WLP LW E+N LLVGFGQQ C
Sbjct: 171 ------VDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCL 224
Query: 344 SQRPSCETCLNKDLCPQGK 362
RP C+ CLN+ LCP +
Sbjct: 225 PVRPRCQACLNQALCPAAQ 243
>gi|296219347|ref|XP_002755822.1| PREDICTED: endonuclease III-like protein 1 [Callithrix jacchus]
Length = 307
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 108/151 (71%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP +W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 89 WEPQNWQQQLANIRAMRSKKDAPVDHLGAEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 148
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL++ Y DIP
Sbjct: 149 TAGAMQRLRAQGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQCYGGDIPA 208
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
++ L LPGVGPKMAHL M AWGIV+GIG
Sbjct: 209 SVAELVALPGVGPKMAHLAMAVAWGIVSGIG 239
>gi|82596217|ref|XP_726170.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481466|gb|EAA17735.1| Drosophila melanogaster CG9272 gene product [Plasmodium yoelii
yoelii]
Length = 386
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 136/244 (55%), Gaps = 36/244 (14%)
Query: 115 NNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE 174
N I+EMRK+ +APVD G + + R+ LIS +LSS+TKDEV MGRLK+
Sbjct: 159 NKIKEMRKNINAPVDKYGCHMLSEQTDDLKNFRFQTLISCLLSSRTKDEVTAMVMGRLKK 218
Query: 175 HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPG 234
HGL +ENI TSE+ L KLI +GF+ K+K I ILK+ YN+DIP+ E L KLPG
Sbjct: 219 HGLNVENILKTSEEELKKLIYGIGFYNVKSKQIIKICQILKEKYNSDIPHNYEELIKLPG 278
Query: 235 VGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVH 294
+G K++ L + A GI VD+H
Sbjct: 279 IGEKVSQLILQTALNKHEGIA-----------------------------------VDIH 303
Query: 295 VHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN 354
VHRIS+RL W K DT+ +L+S++ + LWSE+NHLLVGFGQ ICK ++P CE C
Sbjct: 304 VHRISNRLNWVYT-KNEADTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEKCTL 362
Query: 355 KDLC 358
D C
Sbjct: 363 TDYC 366
>gi|297743769|emb|CBI36652.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 147/268 (54%), Gaps = 46/268 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+++L IR+MR DAPVD+MG + A + P RR+ VL+S +LSSQTKD V H
Sbjct: 131 PANWEKILEGIRKMRSSEDAPVDSMGCEK-AGSSLPPRERRFAVLVSSLLSSQTKDNVTH 189
Query: 167 A---AMGRLKEHGLTIENICNTSEDVLGK-LIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
A+ RL ++GL + + + +++ K LI PVGF+ KA ++K + I Y+ DI
Sbjct: 190 GNAGAIQRLLQNGLLVADAIDKADEATVKSLIYPVGFYSRKAGNLKKIAKICLMKYDGDI 249
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P+++E L LPG+GPKMAHL MN AW V GI
Sbjct: 250 PSSLEELLLLPGIGPKMAHLVMNVAWNNVQGI---------------------------- 281
Query: 283 EKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEVNHLLVG 336
CVD HVHRI +RLGW T PE+TR+ L+ WLP+ W +N LLVG
Sbjct: 282 -------CVDTHVHRICNRLGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINPLLVG 334
Query: 337 FGQQICKSQRPSCETCLNKDLCPQGKKE 364
FGQ IC RP C C DLCP KE
Sbjct: 335 FGQTICTPLRPRCGVCGVSDLCPSAFKE 362
>gi|401416385|ref|XP_003872687.1| putative endonuclease III [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488912|emb|CBZ24161.1| putative endonuclease III [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 258
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 140/269 (52%), Gaps = 36/269 (13%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K++ P++W ++ + + RKH APVD MG + + EV+R+H L++LMLS+QT
Sbjct: 3 KRSFTPPSNWGQLFARLEDYRKHLKAPVDTMGCHRLRDENAPKEVQRFHTLVALMLSAQT 62
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD V AAM L + GLT +++ +E L K I VGF TKA++IK + IL K+Y+
Sbjct: 63 KDVVTAAAMDALIKRGLTAQSVHAMTERELDKHICKVGFHNTKARNIKEVAAILMKDYDG 122
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
+P + LPGVGPKMA+L A V GIG
Sbjct: 123 KVPREYAEVIALPGVGPKMANLFFQDADHRVIGIG------------------------- 157
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRIS R W KTPEDTRK LESWLP W +N L+VG GQ
Sbjct: 158 ----------VDTHVHRISQRYRWVPSTVKTPEDTRKALESWLPLEHWGTINSLMVGLGQ 207
Query: 340 QICKSQRPSCETCLNKDLCPQGKKELAER 368
+C RP C+ C +CP KE ++
Sbjct: 208 TVCTPLRPKCDICELSGICPNAFKETQQK 236
>gi|358395681|gb|EHK45068.1| hypothetical protein TRIATDRAFT_308617 [Trichoderma atroviride IMI
206040]
Length = 422
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 167/328 (50%), Gaps = 55/328 (16%)
Query: 57 KEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNN 116
K+ D+ +K N L + + ++ + + K PD ++ T P+ W+E+ N
Sbjct: 74 KDETDSDEDDKLNALLAAPAIPPKSARRARKPARKVSDPDTGES--TVSPPSDWEEMYNV 131
Query: 117 IREMRKHGDAP----VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL 172
+R+MR G A VD MG + A+ +P +R H LI+LMLSSQTKD V M RL
Sbjct: 132 VRKMRAPGGAAYGAAVDTMGCERLADRSASPRDQRLHSLIALMLSSQTKDTVTAVVMRRL 191
Query: 173 KEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
+ GL ++N+ E++L ++I VGF K K+IK ++IL+ +N DI
Sbjct: 192 QTELPAYKPGAPVGLNLDNVLAVDENLLNQMIWAVGFHNNKTKYIKRTAEILRDEWNGDI 251
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKC 282
P++I+ L LPGVGPKMA+LC++ AW GIG
Sbjct: 252 PDSIQGLTSLPGVGPKMAYLCLSVAWNRTEGIG--------------------------- 284
Query: 283 EKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQIC 342
VDVHVHRI++ GW K K PE+TR L+SWLP W E+N LLVG GQ +C
Sbjct: 285 --------VDVHVHRITNMWGWNKT-KNPEETRLALQSWLPHDRWREINSLLVGLGQSVC 335
Query: 343 KSQRPSCETCLNKDLCPQGKKELAERVK 370
P C + DL QG + AER K
Sbjct: 336 ---LPVGRRCGDCDLGLQGLCKAAERKK 360
>gi|408397046|gb|EKJ76197.1| hypothetical protein FPSE_03672 [Fusarium pseudograminearum CS3096]
Length = 400
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 148/284 (52%), Gaps = 53/284 (18%)
Query: 107 PAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+ + + +R+MR G A VD MG + A+ +P+ +R+H L++LMLSSQTKD
Sbjct: 122 PSDWEAIYDTVRKMRAPGGRAHGAAVDTMGCERLADEKASPKDQRFHTLVALMLSSQTKD 181
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
VN M +L+ GL + N+ L + I VGF K K+IK ++
Sbjct: 182 TVNAVVMRKLQTELPPFEPGAPPGLNLNNVLAIDPKTLNEFIWAVGFHNNKTKYIKQTAE 241
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL+ ++ DIP+TIE L LPGVGPKM +LC++ AWG GIG
Sbjct: 242 ILRDQWDGDIPDTIEGLVSLPGVGPKMGYLCLSVAWGKHEGIG----------------- 284
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNH 332
VDVHVHRI++ GW K K PE+TR L+SWLP+ W E+NH
Sbjct: 285 ------------------VDVHVHRITNLWGWHKT-KNPEETRTTLQSWLPQDRWHEINH 325
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
LLVG GQ +C C C DL QG + A+R K S ++
Sbjct: 326 LLVGLGQSVCLPVGRKCGEC---DLGLQGLCKAADRAKVSAGRK 366
>gi|402225782|gb|EJU05843.1| DNA glycosylase [Dacryopinax sp. DJM-731 SS1]
Length = 321
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 146/272 (53%), Gaps = 49/272 (18%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
W E IREMR A VD MG D + + P+ RR +L+SLMLSSQTKDE AA
Sbjct: 12 RWLETYLLIREMRARLVAAVDTMGCDRPQDRTLDPKSRRLTILVSLMLSSQTKDETTSAA 71
Query: 169 MGRL--KEHG-LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
+ L K G +T++ + + S++ + + I VGFW+ K ++++ + L+ ++ D+P T
Sbjct: 72 VTALAGKMGGVITLQGMLDASDESVQEAICKVGFWRRKTQYLRQTMEKLRDEFDGDVPKT 131
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ LC LPGVGPKMA LC+ +AW I GIG
Sbjct: 132 VDELCSLPGVGPKMAFLCLQNAWDINVGIG------------------------------ 161
Query: 286 IPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKS 344
VD HVHRI++RLGW K TPE TR L+SWLP +E+NH+LVGFGQ +C
Sbjct: 162 -----VDTHVHRITNRLGWHKPPTTTPEQTRLNLQSWLPREYHAEINHMLVGFGQALCFP 216
Query: 345 QRPSCETC--LNKDLCP--------QGKKELA 366
P C+ C K LCP +G+KE+
Sbjct: 217 VAPRCDLCALAEKKLCPSRSKVGNVEGRKEVV 248
>gi|294658207|ref|XP_460548.2| DEHA2F04180p [Debaryomyces hansenii CBS767]
gi|202952958|emb|CAG88864.2| DEHA2F04180p [Debaryomyces hansenii CBS767]
Length = 375
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/299 (38%), Positives = 148/299 (49%), Gaps = 53/299 (17%)
Query: 84 KKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDH-----SAN 138
KK NV K D + T P W E+ N + MR +PVD MG + S N
Sbjct: 82 KKPNVFAKVTSDDVDSIPSTCKAPPKWSELYNEVVAMRSKFLSPVDTMGCERIPEGISPN 141
Query: 139 VD-IAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLK--------EHGLTIENICNTSEDV 189
V P V R+ +LISLMLSSQTKDEVN AM L + GL++E+I SE
Sbjct: 142 VAKTNPRVFRFQLLISLMLSSQTKDEVNFQAMRNLHSGLMALGHKDGLSLESIVTLSEGE 201
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
+ I VGF + KA +IK A IL+ N+++DIP I + LPGVGPKM L + W
Sbjct: 202 IDAFISKVGFHRKKAAYIKKACAILQSNFDSDIPKNITDIVTLPGVGPKMGFLLLQRGWN 261
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
I GIG VDVH+HR++ GW +
Sbjct: 262 INDGIG-----------------------------------VDVHIHRLAQMWGWVAKSE 286
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC---LNKDLCPQGKKEL 365
PE TR ELESWLP+ W ++N LLVGFGQ IC + +C+ C +NK LC K+L
Sbjct: 287 KPESTRTELESWLPKKFWGDINPLLVGFGQVICVPKASNCDICTLGINK-LCKSSNKKL 344
>gi|448100402|ref|XP_004199342.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
gi|359380764|emb|CCE83005.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 153/305 (50%), Gaps = 57/305 (18%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANV------DIAPEVRRYH 149
DE+ +P W ++ N + MR+H ++PVD MG + N ++ P+V R+
Sbjct: 76 DEDLESSDAKQPKDWYKIYNEVALMREHFESPVDTMGCESIPNTIRPGLSEMRPQVYRFQ 135
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEH--------GLTIENICNTSEDVLGKLIIPVGFWK 201
+L+SL+LSSQTKDEV + AM L H GLT+E + SE + LI VGF +
Sbjct: 136 LLVSLILSSQTKDEVTYNAMLNLNRHLMDRGFEDGLTLEAVLTLSETEVDGLISKVGFHR 195
Query: 202 TKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQ 261
KA +I ++ ILK+ +D+P T++ + +LPGVGPKMA+L + W I GIG
Sbjct: 196 KKAAYILKSAAILKETAGSDVPQTVDEITRLPGVGPKMAYLLIQRGWNINDGIG------ 249
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESW 321
VDVHVHR++ W PE TR L++W
Sbjct: 250 -----------------------------VDVHVHRLAQMWRWVPKSDNPERTRLALQAW 280
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA------ERVKKSP 373
LP W E+N LLVGFGQ +C + +C+ C K LCP + LA +R+ K
Sbjct: 281 LPRKFWPEINPLLVGFGQVVCVPRAGNCDICTLATKRLCPSANRSLANTPLTPDRIAKLD 340
Query: 374 KKRKS 378
K R S
Sbjct: 341 KGRGS 345
>gi|448104103|ref|XP_004200201.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
gi|359381623|emb|CCE82082.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 151/295 (51%), Gaps = 57/295 (19%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANV------DIAPEVRRYHVLISLMLSSQ 159
+P W ++ N + MR+H ++PVD MG + N ++ P V R+ +L+SL+LSSQ
Sbjct: 88 QPKDWYKIYNEVALMREHFESPVDTMGCESIPNTIRPGLSEMKPRVYRFQLLVSLILSSQ 147
Query: 160 TKDEVNHAAMGRLKEH--------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
TKDEV + AM L H GLT+E + SE + LI VGF + KA +I ++
Sbjct: 148 TKDEVTYNAMVNLNRHLMDRGFEDGLTLEAVLTLSEAEVDGLISKVGFHRKKAAYILKSA 207
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
ILK+ +D+P T++ + +LPGVGPKMA+L + W I GIG
Sbjct: 208 AILKETAGSDVPQTVDEITRLPGVGPKMAYLLIQRGWNINDGIG---------------- 251
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVN 331
VDVHVHR++ W +PE TR L++WLP+ W E+N
Sbjct: 252 -------------------VDVHVHRLAQMWRWVPKSDSPERTRLALQAWLPKKFWPEIN 292
Query: 332 HLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA------ERVKKSPKKRKS 378
LLVGFGQ +C + +C+ C K LCP + LA +R+ K K R S
Sbjct: 293 PLLVGFGQVVCVPRAGNCDICTLATKRLCPSASRSLANTPLTPDRIAKLDKGRGS 347
>gi|50555097|ref|XP_504957.1| YALI0F03641p [Yarrowia lipolytica]
gi|49650827|emb|CAG77764.1| YALI0F03641p [Yarrowia lipolytica CLIB122]
Length = 483
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 174/348 (50%), Gaps = 53/348 (15%)
Query: 27 HMVVKYDEPKFQQ---TRCQLEKNIALNNPLDDKE-HNDNKTQNKKNTLYKSEKLGKRTL 82
HM K D+ KF Q + + E + + + L+ + D K + K K+E + +
Sbjct: 141 HMTPKLDQFKFSQKAKVQSESENTVKIEDELESYDLSRDIKAEEKSAYFIKTEPVIPPLI 200
Query: 83 LKKQNVHNKDPIPDENDTKK-----TKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSA 137
+ H P E + + ++ P W + +++MR +APVD MG +
Sbjct: 201 SDIEECHTF-AAPQEFNVQDNPEVLSQPGPRGWSTIYARVKKMRALVNAPVDTMGCERLV 259
Query: 138 NVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG------LTIENICNTSEDVLG 191
+ +V+R+ +LISLMLSSQTKDEV A+ L+E L+++ I + S +
Sbjct: 260 QDGVPAKVQRFQLLISLMLSSQTKDEVTCQAVLNLREFLKSRDLLLSVDGILSMSVGEID 319
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
I VGF KA +I A+ +L K++ DIP TI + LPGVGPKMAHL M+ AWG+
Sbjct: 320 GCISKVGFHNRKADYISRATALLVKDFGGDIPPTIAAMTSLPGVGPKMAHLLMHRAWGVN 379
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTP 311
GIG VDVHVHR+++ GW K KTP
Sbjct: 380 EGIG-----------------------------------VDVHVHRLANMWGWVK-GKTP 403
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL-NKDLC 358
E++R +LE WLP+ LW ++N LVGFGQ +C S+ C C+ +K LC
Sbjct: 404 EESRVQLEKWLPQELWVDINPTLVGFGQTVCPSKGKKCGVCIVDKGLC 451
>gi|350539139|ref|NP_001232362.1| endonuclease III-like protein 1 [Taeniopygia guttata]
gi|197127336|gb|ACH43834.1| putative Endonuclease III-like protein 1 [Taeniopygia guttata]
Length = 235
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 110/157 (70%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSS 158
+ ++ +WEP HW+E L IR+MR DAPVD MG + PEV RY VL++LMLSS
Sbjct: 51 EPRRARWEPPHWREQLQRIRDMRSSRDAPVDEMGVQTCYDSSAPPEVMRYQVLLALMLSS 110
Query: 159 QTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
QTKD+V AAM RL+ GL+++++ ++ LG++I PVGFW+ K K+IK + ILK+ Y
Sbjct: 111 QTKDQVTSAAMLRLRRRGLSVDSVLQMDDETLGQIIYPVGFWRNKVKYIKQTTAILKQKY 170
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
DIP+T+E L +LPGVGPKMAHL M+ AW V GIG
Sbjct: 171 GGDIPSTVEELVQLPGVGPKMAHLAMHIAWDSVAGIG 207
>gi|410049791|ref|XP_003954501.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein 1
[Pan troglodytes]
Length = 266
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 108/152 (71%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 89 WEPQDWQQQLVNIRAMRNKKDAPVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQV 148
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LGKLI PVGFW++K K+IK S IL+++Y DIP
Sbjct: 149 TAGAMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPA 208
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
++ L LPGVGPKMAHL M AWG V+GIG+
Sbjct: 209 SVAELVALPGVGPKMAHLAMAVAWGTVSGIGE 240
>gi|403175797|ref|XP_003334554.2| endonuclease III [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375171758|gb|EFP90135.2| endonuclease III [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 465
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 141/289 (48%), Gaps = 69/289 (23%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEV--------------------- 145
PA WKE I E RK APVD MG D + D+ P+
Sbjct: 69 PARWKETYGLIEEQRKTFIAPVDTMGCDKAG--DVGPDYQLKSASDSTISQDKIDQLKQR 126
Query: 146 ----RRYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVG 198
RR L+SLMLSSQTKDEV A L+ H LT++++ N S + I VG
Sbjct: 127 SERDRRLSCLVSLMLSSQTKDEVTAQATLNLRLHLKDSLTVDSLRNASLTEIENCINKVG 186
Query: 199 FWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDE 258
FWK KA++IK+ +D L + +D+P T++ L L GVGPKMA L +++AW I GIG
Sbjct: 187 FWKKKAQYIKLMADDLFLKHESDVPKTLDELVALKGVGPKMAFLALSNAWAINLGIG--- 243
Query: 259 SRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKEL 318
VD HVHRIS+RLGW + PE TR L
Sbjct: 244 --------------------------------VDTHVHRISNRLGWLQT-SDPEATRINL 270
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL---NKDLCPQGKKE 364
ESWLP L+ E+NHLLVGFGQ IC P CE C LCP K E
Sbjct: 271 ESWLPRDLFQEINHLLVGFGQVICLPVGPKCEDCYVGKVPGLCPSSKVE 319
>gi|429850189|gb|ELA25486.1| DNA repair protein ntg1 [Colletotrichum gloeosporioides Nara gc5]
Length = 440
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 154/301 (51%), Gaps = 69/301 (22%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+E+ N ++EMR HG DA VD MG + + D + RR+H+LI+LMLSSQTKD
Sbjct: 121 PSDWEEMYNQVKEMRLHGAAKDAAVDTMGCERLFHPDASERDRRFHILIALMLSSQTKDT 180
Query: 164 VNHAAMGRL----------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK-------- 205
VN AM RL E GL +ENI D L +LI VGF K K
Sbjct: 181 VNAVAMKRLMTELPPHKEGAEGGLCLENILAVEPDKLNELIWAVGFHNNKTKSVIMSDAS 240
Query: 206 --------HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKD 257
+IK A++IL+ ++ D+P+TIE L LPGVGPKM +LC++ AW GIG
Sbjct: 241 LSNVDGIRYIKAAAEILRDKFDGDVPDTIEGLTSLPGVGPKMGYLCLSAAWDKTEGIG-- 298
Query: 258 ESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKE 317
VDVHVHRI++ GW K + PE TR
Sbjct: 299 ---------------------------------VDVHVHRITNLWGWHKTTQ-PEGTRMA 324
Query: 318 LESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
L+SWLP+ W E+N LLVG GQ +C P C + L +G + AER KK + RK
Sbjct: 325 LQSWLPKDKWREINWLLVGLGQTVC---LPVGRKCGDCQLGLKGLCKAAER-KKVTEGRK 380
Query: 378 S 378
+
Sbjct: 381 A 381
>gi|169614824|ref|XP_001800828.1| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
gi|160702827|gb|EAT81956.2| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
Length = 1058
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 139/260 (53%), Gaps = 41/260 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+E+ REMR APVD MG + A+ + P +R+ L++LMLSSQTKD V
Sbjct: 120 PANWEEIYALTREMRNENIAPVDTMGCESLADRERTPRDQRFQTLVALMLSSQTKDTVTA 179
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM ++E+ G +E++ L +I VGF K K+IK ++IL+ ++ +IP
Sbjct: 180 VAMRNMQENMPGGFNLESVLALPPPDLNAMINKVGFHNLKTKYIKATAEILRDKFDGEIP 239
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
++IE L LPGVGPKMA+L M+ AWG GIG
Sbjct: 240 DSIEGLVSLPGVGPKMAYLTMSAAWGKDEGIG---------------------------- 271
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ GW K +TPE TR LESWLP W ++N+LLVG GQ IC
Sbjct: 272 -------VDVHVHRITNLWGWNKT-QTPEQTRAALESWLPRDKWHDINNLLVGHGQTICL 323
Query: 344 SQRPSCETC--LNKDLCPQG 361
C C ++ LCP
Sbjct: 324 PVGRKCGECKLADRGLCPSA 343
>gi|300120326|emb|CBK19880.2| unnamed protein product [Blastocystis hominis]
Length = 198
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 125/212 (58%), Gaps = 37/212 (17%)
Query: 155 MLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL 214
MLSSQTKD+ HA M +L+E+GLT ++I TS++ LG+LI VGFW K K+IK +DIL
Sbjct: 1 MLSSQTKDQTTHATMLKLREYGLTPKHIQETSDEKLGELICKVGFWTKKVKYIKKTTDIL 60
Query: 215 KKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRS 274
+ Y+ DIP+TIE L KLPGVGPKM +L + AW + GIG
Sbjct: 61 LEKYDGDIPDTIEELVKLPGVGPKMGYLALKVAWNKIDGIG------------------- 101
Query: 275 ELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLL 334
VDVHVHRIS+RL W TPE TR LE+WLP+ W E+N LL
Sbjct: 102 ----------------VDVHVHRISNRLEWVHT-NTPEQTRVALEAWLPKQYWFEINLLL 144
Query: 335 VGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
VGFGQQICK P C C +++CP K ++
Sbjct: 145 VGFGQQICKGS-PKCSECKLRNMCPSSKYNVS 175
>gi|355708146|gb|AES03177.1| nth endonuclease III-like 1 [Mustela putorius furo]
Length = 210
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
WEP W++ L NIR MR DAPVD +G +H + P+VRRY VL+SLMLSSQTKD+V
Sbjct: 61 WEPPDWQQQLVNIRTMRSGKDAPVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQV 120
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
AM RL+ GLT+++I T + LG LI PVGFW++K K IK S IL++ Y DIP+
Sbjct: 121 TAGAMERLRARGLTVDSILQTDDSTLGALIYPVGFWRSKVKFIKQTSAILQQRYGGDIPS 180
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
++ L LPGVGPKMAHL M AWG V+GI
Sbjct: 181 SVAELVALPGVGPKMAHLAMAVAWGAVSGI 210
>gi|221058032|ref|XP_002261524.1| endonuclease iii homologue [Plasmodium knowlesi strain H]
gi|194247529|emb|CAQ40929.1| endonuclease iii homologue, putative [Plasmodium knowlesi strain H]
Length = 396
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 142/257 (55%), Gaps = 36/257 (14%)
Query: 102 KTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTK 161
+T+ + H+ + I +MRKH APVD G ++ + +V R+ L+S MLS++T+
Sbjct: 160 QTEQKLEHFLQTYEKISKMRKHIVAPVDKYGCHMLSDKTESAKVYRFQTLVSCMLSTRTR 219
Query: 162 DEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
DE AM RLK+HGLT+ N+ TSE+ L KLI VGF+K KAK I S IL+ Y+ D
Sbjct: 220 DESTAMAMERLKKHGLTVHNMLKTSEEELKKLIQTVGFYKIKAKQIIQISQILRDKYDYD 279
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRK 281
IP+T+E L +LPG+G K+AHL + A GI
Sbjct: 280 IPHTLEGLLELPGIGQKVAHLILQTALDTHEGI--------------------------- 312
Query: 282 CEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VD+HVHRIS+RL W K T+ +LES++P +LWSE+N LVGFGQ +
Sbjct: 313 --------AVDIHVHRISNRLNWV-CTKNESITQSKLESYVPRALWSELNKTLVGFGQVV 363
Query: 342 CKSQRPSCETCLNKDLC 358
CK++ P C C + C
Sbjct: 364 CKAKSPHCTMCAVTNCC 380
>gi|156839963|ref|XP_001643667.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156114287|gb|EDO15809.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 429
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 145/283 (51%), Gaps = 56/283 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGW----------DHSANVDIAPEVRRYHVLISLML 156
P ++ + + +R MR PVD +G DI P R VLI +ML
Sbjct: 131 PDNFIPIYSKVRLMRSKIRTPVDTVGCAMLPITVGKESGIEKEDILPINYRLQVLIGVML 190
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
SSQTKDE+N AAM + E+ G+TI+ + +++L +LI VGF KAK++
Sbjct: 191 SSQTKDEINAAAMHNITEYCINELEIPEGITIDALLEIDQEILDELIHSVGFHSRKAKYL 250
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + ILK+ +N+DIP IE L LPGVGPKM +L + AWG + GI
Sbjct: 251 KETALILKEKHNSDIPTNIEGLLALPGVGPKMGYLTLQKAWGKIDGI------------- 297
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPES 325
CVDVHVHR++ W K KTPE TRKELESWLP
Sbjct: 298 ----------------------CVDVHVHRLAKMWKWVDEKKCKTPEHTRKELESWLPRQ 335
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
LW E+N +LVGFGQ IC S+ C+ CL D+C K+L +
Sbjct: 336 LWYEINSVLVGFGQVICMSRGKRCDICLANDVCNARDKKLVNK 378
>gi|70988789|ref|XP_749248.1| DNA repair protein Ntg1 [Aspergillus fumigatus Af293]
gi|66846879|gb|EAL87210.1| DNA repair protein Ntg1, putative [Aspergillus fumigatus Af293]
Length = 432
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 163/342 (47%), Gaps = 76/342 (22%)
Query: 50 LNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDP------IPDENDTKKT 103
L PL ++ + K+ T + KR +K ++ K I EN + K
Sbjct: 81 LEPPLKKRKSSPGSPSTKRTTRAPGRTITKREAVKVESAKPKSRRVPARNIKGENGSIKI 140
Query: 104 KWEPAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
+ P++W+ + + +++MR++ APVD MG +P +R+ LI+LMLSSQTKD
Sbjct: 141 E-PPSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKD 199
Query: 163 EVNHAAMGRL--------------------------------KEHGLTIENICNTSEDVL 190
V AM RL K+ L +ENI S + L
Sbjct: 200 TVTAVAMQRLHTELGNGRALAEDPIVKKEEQEDIDLKSSQPLKDSTLNLENILAVSPEKL 259
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
+LI VGF K K+IK A++IL+ YN+DIP+T E L KLPGVGPKMA+LCM+ AWG
Sbjct: 260 NELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGK 319
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
GIG VDVHVHRI++ GW K KT
Sbjct: 320 DEGIG-----------------------------------VDVHVHRITNLWGWHKT-KT 343
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
PE+TR LESWLP W E+N LLVG GQ +C C C
Sbjct: 344 PEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGEC 385
>gi|400593176|gb|EJP61171.1| HhH-GPD superfamily base excision DNA repair protein [Beauveria
bassiana ARSEF 2860]
Length = 393
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 141/271 (52%), Gaps = 50/271 (18%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAP----VDAMGWDHSANVDIAPEVRRYHVL 151
D + T P+ W+EV +R+MR G A VD MG + A+ + + +R+H L
Sbjct: 112 DPETGETTVAPPSDWEEVYGIVRKMRAPGGAAYGAAVDTMGCERLADRGCSEKDQRFHTL 171
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWK 201
I+LMLSSQTKD VN M RL+ GL ++NI D L K+I VGF
Sbjct: 172 IALMLSSQTKDTVNAVVMKRLQTELPPYKPGAPAGLNLDNILAVDPDTLNKMIWAVGFHN 231
Query: 202 TKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQ 261
K K+IK A++IL+ +N DIP+TIE L LPGVGPKM +LC++ AWG GIG
Sbjct: 232 NKTKYIKKAAEILRDEWNGDIPDTIEGLTALPGVGPKMGYLCLSAAWGRTEGIG------ 285
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESW 321
VDVHVHRI++ GW K K PE+TR L++W
Sbjct: 286 -----------------------------VDVHVHRITNMWGWHKT-KNPEETRLALQAW 315
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
LP W E+N LLVG GQ +C C +C
Sbjct: 316 LPRDRWREINGLLVGLGQAVCVPVGQRCGSC 346
>gi|343421996|emb|CCD18619.1| endonuclease III, putative, (fragment) [Trypanosoma vivax Y486]
Length = 212
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 135/243 (55%), Gaps = 36/243 (14%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
++T P++W ++ I+E+R+ +APVD +G + + EVRRYH+L++LMLS+QT
Sbjct: 2 RRTFKPPSNWSKLYAVIKEIREKVEAPVDTVGCAKLFDTKASNEVRRYHILLALMLSAQT 61
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
KD+V AM L ++G T +I +E L I VGF TKAK+IK A+D++ K +
Sbjct: 62 KDQVTADAMFSLIKYGCTPASISKMTESKLNDFISKVGFHNTKAKNIKAATDMILKLHEG 121
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
+P + E L LPGVGPKMAHL + A G+V GIG
Sbjct: 122 KVPQSYEELIALPGVGPKMAHLFLQAADGVVLGIG------------------------- 156
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRI+ R W K+PEDTRK LESWLP W E+N LLVG GQ
Sbjct: 157 ----------VDTHVHRIAQRFRWVPATVKSPEDTRKALESWLPREHWGEINELLVGLGQ 206
Query: 340 QIC 342
IC
Sbjct: 207 TIC 209
>gi|357454433|ref|XP_003597497.1| Endonuclease III-like protein [Medicago truncatula]
gi|355486545|gb|AES67748.1| Endonuclease III-like protein [Medicago truncatula]
Length = 331
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 139/274 (50%), Gaps = 47/274 (17%)
Query: 98 NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
N +T PA+W+ VL IR+M +D G A++ P+ RR+ VL S +LS
Sbjct: 78 NGLGQTNESPANWENVLEGIRKMMYS----IDTTGDREDADIH-PPKDRRFAVLASSLLS 132
Query: 158 SQTKDEVNHAAMGRLKEHGLTIENICNTS-EDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
SQTK+ V A RL+++GL + N + E+ + K I PVGF+ KA ++K +DI
Sbjct: 133 SQTKEHVTRGATQRLRQNGLLTADALNKADEETIKKQIYPVGFYIRKAGNLKKIADICLT 192
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y+ DIPN+IE L LPGVGPK+AHL M AW V GI
Sbjct: 193 KYDGDIPNSIEELLSLPGVGPKIAHLVMIIAWNNVQGI---------------------- 230
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT------PEDTRKELESWLPESLWSEV 330
CVD HVHRIS+RLGW T PE+TRK LE WLP W +
Sbjct: 231 -------------CVDTHVHRISNRLGWVSRPGTKQRTSIPEETRKALERWLPREEWVAI 277
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LLVGFG+ IC RP C C CP KE
Sbjct: 278 NLLLVGFGRTICTPLRPRCGECGVSRFCPSAFKE 311
>gi|134078608|emb|CAK32626.1| unnamed protein product [Aspergillus niger]
Length = 390
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 136/251 (54%), Gaps = 41/251 (16%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR+ APVD MG +P RR+ LI+LMLSSQTKD V
Sbjct: 140 PSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVT 199
Query: 166 HAAMGRL----KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
AM RL +H L +ENI + + L +LI VGF K K+IK A+ IL+ Y++D
Sbjct: 200 AVAMQRLHTELGDHTLNLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYDSD 259
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRK 281
IP+T L KLPGVGPKMA LCM+ AWG GIG
Sbjct: 260 IPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIG-------------------------- 293
Query: 282 CEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VDVHVHRI++ GW K K PE+TR LESWLP+ W E+N LLVG GQ +
Sbjct: 294 ---------VDVHVHRITNLWGWHKT-KNPEETRMALESWLPKDKWHEINKLLVGLGQTV 343
Query: 342 CKSQRPSCETC 352
C C C
Sbjct: 344 CLPVARRCGEC 354
>gi|154332722|ref|XP_001562623.1| putative endonuclease III [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059626|emb|CAM41746.1| putative endonuclease III [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 259
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 138/274 (50%), Gaps = 38/274 (13%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P++W ++ + + RKH APVD MG + + EV+R+ L++LMLS+QTKD V
Sbjct: 9 PSNWAQLFARLEDYRKHLLAPVDTMGCHRLHDENAPKEVQRFQTLVALMLSAQTKDIVTA 68
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
AM L + GLT ++I + L I VGF TK KHIK + IL K+Y +P
Sbjct: 69 TAMDALIKRGLTAQSIHAMTTTELDMHICKVGFHNTKVKHIKEVAAILIKDYGGKVPREY 128
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
E L LPGVGPKMA+L A GIG
Sbjct: 129 EELIALPGVGPKMANLFFQDADHRTVGIG------------------------------- 157
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRIS R W KTPEDTRK LESWLP+ W +N L+VG GQ +C
Sbjct: 158 ----VDTHVHRISQRYRWVPSTVKTPEDTRKALESWLPQKHWGTINSLMVGLGQTVCTPL 213
Query: 346 RPSCETCLNKDLCPQGKKELAERV--KKSPKKRK 377
P C C D+CP KE+ ++ K+P +R+
Sbjct: 214 YPKCGICELSDICPNAFKEVQQKGLRTKAPTERR 247
>gi|159128662|gb|EDP53776.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 432
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 162/342 (47%), Gaps = 76/342 (22%)
Query: 50 LNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKD------PIPDENDTKKT 103
L PL ++ + K+ T + KR +K + K I EN + K
Sbjct: 81 LEPPLKKRKSSPGSPSTKRTTRAPGRTITKREAVKVEPAKPKSRRVPARKIKGENGSIKI 140
Query: 104 KWEPAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
+ P++W+ + + +++MR++ APVD MG +P +R+ LI+LMLSSQTKD
Sbjct: 141 E-PPSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKD 199
Query: 163 EVNHAAMGRL--------------------------------KEHGLTIENICNTSEDVL 190
V AM RL K+ L +ENI S + L
Sbjct: 200 TVTAVAMQRLHTELGNGRALAEDPIVKKEEQEDIDLKSSQPLKDSTLNLENILAVSPEKL 259
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
+LI VGF K K+IK A++IL+ YN+DIP+T E L KLPGVGPKMA+LCM+ AWG
Sbjct: 260 NELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGK 319
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
GIG VDVHVHRI++ GW K KT
Sbjct: 320 DEGIG-----------------------------------VDVHVHRITNLWGWHKT-KT 343
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
PE+TR LESWLP W E+N LLVG GQ +C C C
Sbjct: 344 PEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGEC 385
>gi|378727145|gb|EHY53604.1| endonuclease III [Exophiala dermatitidis NIH/UT8656]
Length = 468
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 140/275 (50%), Gaps = 59/275 (21%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W E+ ++ MR ++ APVD MG + P +RYH L SLMLSSQTKD V
Sbjct: 174 PSNWNEIYEIVKAMRQRNPTAPVDTMGCEELFWPTAPPRDKRYHTLTSLMLSSQTKDTVT 233
Query: 166 HAAMGRL-------------------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
AM RL K+ LTI+NI + L LI VGF K K+
Sbjct: 234 AVAMHRLHTELVSTDEINPEEGEAETKQSQLTIDNIISCDPKHLDNLIGKVGFHNNKTKY 293
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK A+ ILK+ +N+DIP+TIE L LPGVGPKMA+LCM+ AWG GIG
Sbjct: 294 IKQAALILKERFNSDIPDTIEGLVSLPGVGPKMAYLCMSAAWGRDEGIG----------- 342
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VDVHVHRI++ GW K KTPE+TR LE+WLP
Sbjct: 343 ------------------------VDVHVHRITNLWGWHKT-KTPEETRACLEAWLPRDK 377
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W E+N +LVG GQ +C C C DL G
Sbjct: 378 WHEINKMLVGLGQTVCLPVGRKCGEC---DLAGTG 409
>gi|356547306|ref|XP_003542056.1| PREDICTED: endonuclease III-like protein 1-like [Glycine max]
Length = 290
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 139/275 (50%), Gaps = 48/275 (17%)
Query: 107 PAHWKEVLNNIREMRKHGD--APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
PAHWK VL IR+MR D PV A + P+ RR+ VL S +LSSQTK+ V
Sbjct: 46 PAHWKMVLQGIRQMRSSADEHQPVS----REKAADTVPPKERRFAVLTSSLLSSQTKEHV 101
Query: 165 NHAAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
A RL E+ L T + + E+ + KLI PVGF+K KA ++K ++I Y+ DIP
Sbjct: 102 TRGATQRLGENDLLTADAMDKADEETIKKLIYPVGFYKRKASNLKKIANICLLKYDGDIP 161
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
++IE L LPGVGPK+AHL M W V GI
Sbjct: 162 SSIEELLLLPGVGPKIAHLVMIVGWNNVQGI----------------------------- 192
Query: 284 KKIPQLCVDVHVHRISHRLGWT------KVFKTPEDTRKELESWLPESLWSEVNHLLVGF 337
CVD HVHRI +RLGW + TPE+TR+ L+ WLP+ W +N LLVGF
Sbjct: 193 ------CVDTHVHRICNRLGWVSRPGSKQKTLTPEETRQALQRWLPKEEWVPINTLLVGF 246
Query: 338 GQQICKSQRPSCETCLNKDLCPQGKKELAERVKKS 372
G+ IC RP C C CP KE + KS
Sbjct: 247 GRAICTPLRPHCGDCSVNRFCPSAFKETSSLSSKS 281
>gi|241949395|ref|XP_002417420.1| DNA base excision repair N-glycosylase, putative; DNA-(apurinic or
apyrimidinic site) lyase, putative; endonuclease III
homolog, putative [Candida dubliniensis CD36]
gi|223640758|emb|CAX45072.1| DNA base excision repair N-glycosylase, putative [Candida
dubliniensis CD36]
Length = 320
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/292 (39%), Positives = 151/292 (51%), Gaps = 57/292 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA------PEVRRYHVLISLMLSSQT 160
P W E+ N + MR APVD G + N A P+V R+ +LISLMLSSQT
Sbjct: 53 PPKWSEIYNQLVWMRSKFLAPVDTQGCERMPNAINANIKLRNPKVYRFQLLISLMLSSQT 112
Query: 161 KDEVNHAAM-----GRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
KDEVN+ AM G LK H GL IE++ SE + I VGF KA++IK I
Sbjct: 113 KDEVNYQAMKNLHEGLLKVHPDGLCIESLSKLSEAEIDSYIKKVGFHNRKAQYIKKTCSI 172
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L +N+ DIP TIE + LPGVGPKM L + AWGI G+G
Sbjct: 173 LMENFGGDIPKTIEEIVALPGVGPKMGFLLLQSAWGINAGVG------------------ 214
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNH 332
VDVH+HR++ GW ++ TPE R EL+ WLP++ W+++N
Sbjct: 215 -----------------VDVHLHRLALMWGWVSQKANTPEKARLELQEWLPKNYWADINP 257
Query: 333 LLVGFGQQICKSQRPSCETC-LNKD-LCPQGKKELA------ERVKKSPKKR 376
L+VGFGQ IC + +C+ C L +D LC K+L ER+ K K+R
Sbjct: 258 LVVGFGQVICVPRAANCDICSLARDGLCKNANKKLLRTPLSEERINKLSKQR 309
>gi|340517593|gb|EGR47837.1| hypothetical protein TRIREDRAFT_30805 [Trichoderma reesei QM6a]
Length = 250
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 150/284 (52%), Gaps = 53/284 (18%)
Query: 107 PAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+E+ + +R+MR G A VD MG + A+ + +P+ +R H LI+LMLSSQTKD
Sbjct: 3 PSDWEEMYDVVRKMRAPGGVAHGAAVDTMGCERLADPNASPKDQRLHSLIALMLSSQTKD 62
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
V M RL+ GL ++N+ ++L ++I VGF K K+IK A++
Sbjct: 63 TVTAVVMRRLQTELPACRPGAPVGLNLDNLLAVDANLLNQMIWAVGFHNNKTKYIKKAAE 122
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL+ +N DIP+T+E L LPGVGPKMA+LC++ AW GIG
Sbjct: 123 ILRDEWNGDIPDTVEGLTSLPGVGPKMAYLCLSVAWNRTEGIG----------------- 165
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNH 332
VDVHVHRI++ GW K K PE+TR L+SWLP W E+N
Sbjct: 166 ------------------VDVHVHRITNMWGWHKT-KNPEETRLALQSWLPRDRWREING 206
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
LLVG GQ +C C C DL QG + AER K +R
Sbjct: 207 LLVGLGQSVCLPVGRRCGEC---DLGLQGLCKAAERKKVIEGRR 247
>gi|156082960|ref|XP_001608964.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis T2Bo]
gi|154796214|gb|EDO05396.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis]
Length = 205
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 131/237 (55%), Gaps = 36/237 (15%)
Query: 131 MGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVL 190
MG A+ + + +Y LI+ MLSSQTKD V AAM LK+ GLT ENI ED L
Sbjct: 1 MGAHCCADATQSERIYQYQTLIACMLSSQTKDAVTAAAMDALKQRGLTPENISKMPEDEL 60
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
LI VGF KTKAKHIK A++++ + +P+ IE L LPGVGPKM +L + +
Sbjct: 61 DSLISKVGFHKTKAKHIKQATEMILNKFGGKVPDNIEDLVTLPGVGPKMGNLVLQIGF-- 118
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
K+I + VD+HVHRI++RL W K KT
Sbjct: 119 ---------------------------------KRINGIAVDLHVHRIANRLQWVKT-KT 144
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAE 367
PE+TR +L+ +P+ LW+EVNHLLVGFGQ +C + P C TC CP GK LA+
Sbjct: 145 PEETRIKLQELIPKRLWAEVNHLLVGFGQTVCVAAGPGCGTCGANTWCPVGKANLAK 201
>gi|156100939|ref|XP_001616163.1| endonuclease III homologue [Plasmodium vivax Sal-1]
gi|148805037|gb|EDL46436.1| endonuclease III homologue, putative [Plasmodium vivax]
Length = 417
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 139/262 (53%), Gaps = 36/262 (13%)
Query: 97 ENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLML 156
+N+ + H+ I +MR+H APVD G ++ + +V R+ L+S ML
Sbjct: 176 DNNASPAGGKLGHFLRTYERISQMRRHIVAPVDKYGCHMLSDKRESEKVYRFQTLVSCML 235
Query: 157 SSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK 216
S++T+DE AM +LK HGLTI N+ T E+ L KLI VGF+K KAK I S IL+
Sbjct: 236 STRTRDESTAMAMQKLKAHGLTIHNMLKTPEEELQKLIQAVGFYKIKAKQIIQISQILRD 295
Query: 217 NYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSEL 276
Y+ DIP+T+E L KLPG+G K+AHL + A GI
Sbjct: 296 QYDYDIPHTLEGLLKLPGIGQKVAHLILQTALDTHEGI---------------------- 333
Query: 277 ICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVG 336
VD+HVHRIS+RL W K T+ +LES++P +LWSE+N LVG
Sbjct: 334 -------------AVDIHVHRISNRLNWV-CTKNESATQSKLESFVPRTLWSELNKTLVG 379
Query: 337 FGQQICKSQRPSCETCLNKDLC 358
FGQ +CK++ P C C D C
Sbjct: 380 FGQVVCKAKSPHCNMCAVTDGC 401
>gi|440634594|gb|ELR04513.1| hypothetical protein GMDG_06808 [Geomyces destructans 20631-21]
Length = 485
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 143/273 (52%), Gaps = 57/273 (20%)
Query: 107 PAHWKEVLNNIREMRKHG----DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P +W+ + + + +MR +G DA VD MG A D +P +R+ L+SLM+SSQTKD
Sbjct: 143 PQNWERIYDLVMKMRTNGGVAADAAVDTMGCHTLAQPDASPRDQRFQTLVSLMMSSQTKD 202
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
N+ M +L + GL +ENI + L +LI VGF K ++IK A++
Sbjct: 203 TTNYVVMQKLYKELPAATPGGRPGLNLENILAVPAERLNELIWAVGFHNNKTRYIKGAAE 262
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL+ + DIP+T E L LPGVGPKMA+LC++ AWG V GIG
Sbjct: 263 ILRDAHGGDIPDTAEGLMALPGVGPKMAYLCLSAAWGRVEGIG----------------- 305
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGW--TKVFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW K PE+TR LE W+P W+E+
Sbjct: 306 ------------------VDVHVHRITNLWGWHGRGGTKGPEETRGRLEGWVPRGRWAEI 347
Query: 331 NHLLVGFGQQICKSQR-----PSCETCLNKDLC 358
N LLVGFGQ +C S+R CE L + LC
Sbjct: 348 NWLLVGFGQTVCMSERGRRRCGECEVGL-EGLC 379
>gi|330933705|ref|XP_003304261.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
gi|311319189|gb|EFQ87616.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
Length = 391
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 134/258 (51%), Gaps = 41/258 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+WK++ REMR APVD MG + A+ P +R+ LI+LMLSSQTKD V
Sbjct: 103 PANWKDMYALTREMRNENVAPVDTMGCESLADRQRTPRDQRFQTLIALMLSSQTKDTVLA 162
Query: 167 AAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
M ++E G +E++ L I VGF K K+IK ++IL+ +N+DIP
Sbjct: 163 PVMRNMQEKMPGGFNLESVLALEPPALNAFINKVGFHNLKTKYIKQTAEILRDKWNSDIP 222
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+ IE L LPGVGPKM +LC++ AWG GIG
Sbjct: 223 DNIEGLISLPGVGPKMGYLCLSAAWGRTEGIG---------------------------- 254
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI + W K +TPE TR LESWLP+ W +N+LLVGFGQ IC
Sbjct: 255 -------VDVHVHRIVNLWKWHKT-QTPEQTRAALESWLPKEKWHGINNLLVGFGQTICL 306
Query: 344 SQRPSCETC--LNKDLCP 359
C C ++ LCP
Sbjct: 307 PVGRKCGNCKLADRGLCP 324
>gi|448511256|ref|XP_003866500.1| Ntg1 protein [Candida orthopsilosis Co 90-125]
gi|380350838|emb|CCG21061.1| Ntg1 protein [Candida orthopsilosis Co 90-125]
Length = 361
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 147/293 (50%), Gaps = 56/293 (19%)
Query: 90 NKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVR--- 146
N P D D+ K PA+W ++ N I EMR APVD+ G + N I P ++
Sbjct: 80 NIFPKVDPGDSLKG---PANWAKIYNEIVEMRAKFFAPVDSQGCESMPNT-ITPGLKLSD 135
Query: 147 ----RYHVLISLMLSSQTKDEVNHAAM-------GRLKEHGLTIENICNTSEDVLGKLII 195
R+ +LISLMLSSQTKDEVN+ AM G+ G +E + SE + I
Sbjct: 136 PKKYRFQLLISLMLSSQTKDEVNYDAMINLNTGLGKKHAQGFCLEAMSQLSETEIDSYIC 195
Query: 196 PVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
VGF KA++I ILK +N DIPN IE + +LPGVGPKM +L + WGI +GIG
Sbjct: 196 KVGFHNRKAQYIARTCQILKSEFNGDIPNNIEDIVRLPGVGPKMGYLLLQAGWGINSGIG 255
Query: 256 KDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDT 314
VDVH+HR++ W TPE
Sbjct: 256 -----------------------------------VDVHLHRLASLWHWVSPKATTPEKC 280
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL 365
R ELESWLP++ WS++N L+VGFGQ IC + +C+ C K LC K+L
Sbjct: 281 RIELESWLPQNYWSDINPLIVGFGQVICVPRASNCDICALGRKKLCSAANKKL 333
>gi|344300617|gb|EGW30938.1| hypothetical protein SPAPADRAFT_156404 [Spathaspora passalidarum
NRRL Y-27907]
Length = 329
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 149/292 (51%), Gaps = 58/292 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-------EVRRYHVLISLMLSSQ 159
P +W ++ N + MR APVD G + I+P +V R+ +LISLMLSSQ
Sbjct: 51 PPNWVDLYNRVVAMRAKFMAPVDTQGCERMPET-ISPGVSQSNSKVYRFQLLISLMLSSQ 109
Query: 160 TKDEVNHAAMGRL--------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
TKDEVN AM +L + GL IE + TSE + KLI VGF KA +IK +
Sbjct: 110 TKDEVNFDAMTKLHKAMLEKGYKDGLCIEAVLATSESDIDKLIAKVGFHNRKAGYIKRSC 169
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
+L ++N DIP TIE + LPGVGPKM +L + WGI +GIG
Sbjct: 170 QMLIDSHNGDIPTTIEEITALPGVGPKMGYLLLQAGWGINSGIG---------------- 213
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEV 330
VDVH+HR++ GW +K TPE R ELE WLP W +V
Sbjct: 214 -------------------VDVHLHRLAQMWGWVSKKATTPEKARLELEDWLPRQYWKDV 254
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA------ERVKKSPKKR 376
N L+VGFGQ +C S+ +C+ C +C ++LA ER++K +R
Sbjct: 255 NPLMVGFGQVVCGSRAKNCDVCSLNTMCAGKDRKLAGKEVSKERLEKLKAQR 306
>gi|406601198|emb|CCH47119.1| putative endonuclease [Wickerhamomyces ciferrii]
Length = 369
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 149/285 (52%), Gaps = 58/285 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVD--------IAPEVRRYHVLISLMLSS 158
P ++ ++ N+++ MR PVD MG AN+ I ++ R+ +L+SLMLSS
Sbjct: 96 PKNFHDIYNHVKTMRSKIITPVDTMG---CANIPKTINQESPITQKIYRFQLLVSLMLSS 152
Query: 159 QTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
QTKDEVN+ AM +++ + G+TIE++ E L +LI VGF K K+ ++K
Sbjct: 153 QTKDEVNYQAMTKMRNYFINEAGFKDGITIESMLWIDEIKLDELIYSVGFHKRKSGYLKK 212
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
++IL+ + +DIPNT+E L LPGVGPKMA L + W + GIG
Sbjct: 213 TAEILQNQFQSDIPNTLEGLISLPGVGPKMAFLTLQEGWNLNLGIG-------------- 258
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWS 328
VD HVHR+S + GW K K PE TRKELE W+P+ W
Sbjct: 259 ---------------------VDTHVHRLSKQWGWVPKTVKDPEITRKELEKWMPKEYWK 297
Query: 329 EVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELAERVKK 371
E+N LLVGFGQ IC + C+ C + LC + L +V K
Sbjct: 298 EINPLLVGFGQSICLPRGRRCDLCSLSSTKLCSNVDRGLLRKVGK 342
>gi|237842133|ref|XP_002370364.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|211968028|gb|EEB03224.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|221502817|gb|EEE28531.1| A/G-specific adenine glycosylase muty, putative [Toxoplasma gondii
VEG]
Length = 523
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 157/295 (53%), Gaps = 47/295 (15%)
Query: 86 QNVHNK--DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDI-- 141
QNV K +P + D+ EP H+++V + + EMR DAPVD+MG + + +
Sbjct: 260 QNVAKKTDEPFANLPDSP----EPPHFQDVWDAVTEMRAKRDAPVDSMGVEAMGELALQR 315
Query: 142 -APEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG-LTIENICNTSEDVLGKLIIPVGF 199
+ +R+ VL+++MLSSQTKDE A M RL++ L+ E + S L +L+ VGF
Sbjct: 316 DGEKAKRFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMSRLSVAELSELLYGVGF 375
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
++ KA+ +K A IL + Y DIP T E L +L GVGPKMA++ ++ W V GI
Sbjct: 376 YQNKARFLKEACQILLEKYGGDIPPTYEELVQLKGVGPKMANIAVHAGWNRVEGI----- 430
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELE 319
VDVHVHRI++RL W + KTP +T+ L+
Sbjct: 431 ------------------------------AVDVHVHRITNRLNWVRT-KTPIETQHALQ 459
Query: 320 SWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
+L LW E+N L VGFGQQIC+ P C C CP G+K + + KK+P+
Sbjct: 460 KFLRRPLWGEINLLFVGFGQQICRPVNPLCSACKASQWCPVGRK-ASRKEKKTPE 513
>gi|221482289|gb|EEE20644.1| endonuclease III, putative [Toxoplasma gondii GT1]
Length = 523
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 157/295 (53%), Gaps = 47/295 (15%)
Query: 86 QNVHNK--DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDI-- 141
QNV K +P + D+ EP H+++V + + EMR DAPVD+MG + + +
Sbjct: 260 QNVAKKTDEPFANLPDSP----EPPHFQDVWDAVTEMRAKRDAPVDSMGVEAMGELALQR 315
Query: 142 -APEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG-LTIENICNTSEDVLGKLIIPVGF 199
+ +R+ VL+++MLSSQTKDE A M RL++ L+ E + S L +L+ VGF
Sbjct: 316 DGEKAKRFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMSRLSVAELSELLYGVGF 375
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
++ KA+ +K A IL + Y DIP T E L +L GVGPKMA++ ++ W V GI
Sbjct: 376 YQNKARFLKEACQILLEKYGGDIPPTYEELVQLKGVGPKMANIAVHAGWNRVEGI----- 430
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELE 319
VDVHVHRI++RL W + KTP +T+ L+
Sbjct: 431 ------------------------------AVDVHVHRITNRLNWVRT-KTPIETQHALQ 459
Query: 320 SWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
+L LW E+N L VGFGQQIC+ P C C CP G+K + + KK+P+
Sbjct: 460 KFLRRPLWGEINLLFVGFGQQICRPVNPLCSACKASQWCPVGRK-ASRKEKKTPE 513
>gi|345567609|gb|EGX50538.1| hypothetical protein AOL_s00075g174 [Arthrobotrys oligospora ATCC
24927]
Length = 513
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 135/249 (54%), Gaps = 38/249 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+E+ + I+EMR APVD +G A D+ P+V+R+ LI+LM+SSQTKD+V
Sbjct: 193 PENWREMYDLIKEMRLRIPAPVDTVGCARLAQKDVPPKVKRFQHLIALMMSSQTKDQVTG 252
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM RL+ GLT+E+I S L +LI VGF K ++IK A+ +L+ ++ DIP
Sbjct: 253 EAMRRLQTELPGGLTLESILEVSPARLNELIGQVGFHNRKTEYIKKAAVVLRDKFDGDIP 312
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+E + L GVGPKM++L AW TGIG
Sbjct: 313 TEVEDMMSLDGVGPKMSYLLEQCAWDKSTGIG---------------------------- 344
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ W PE TR L+SWLP+ LW E+N LLVGFGQ +C
Sbjct: 345 -------VDVHVHRIANMFKWVPQSSEPEVTRVYLQSWLPKELWREINWLLVGFGQSVCL 397
Query: 344 SQRPSCETC 352
+ C+ C
Sbjct: 398 PRGRRCDLC 406
>gi|344234607|gb|EGV66475.1| hypothetical protein CANTEDRAFT_128882 [Candida tenuis ATCC 10573]
Length = 276
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 146/295 (49%), Gaps = 63/295 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH---------SANVDIAPEVRRYHVLISLMLS 157
P W ++ N + EMR APVD MG + S N P R+ +LISLMLS
Sbjct: 8 PPRWVDIYNEVVEMRAKITAPVDLMGCERIPDGMTPKLSVN---DPRTFRFQLLISLMLS 64
Query: 158 SQTKDEVNHAAMGRLK--------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
SQTKDEV AM +L + GL++E++ S+ L I VGF K +IK
Sbjct: 65 SQTKDEVLDDAMRKLNNGLKSRGFQQGLSLESVMTLSDKELDGYIGKVGFHNRKTVYIKN 124
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
A +L++ + DIPNTIE + KLPGVGPKM +L + W I TGIG
Sbjct: 125 ACIMLQEQFGGDIPNTIEQIVKLPGVGPKMGYLLLQRGWNISTGIG-------------- 170
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VDVH+HR++ GW+K P+ TRK LE WLP W+E
Sbjct: 171 ---------------------VDVHLHRLAMMWGWSKKTTNPDMTRKYLEEWLPRKFWAE 209
Query: 330 VNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA------ERVKKSPKKR 376
+N LLVGFGQ IC Q +C+ C K LC ++L ER++K K R
Sbjct: 210 INPLLVGFGQVICTPQFQNCDVCSLATKSLCKSVNRKLVNKGLTEERLEKLKKGR 264
>gi|320588628|gb|EFX01096.1| DNA repair protein [Grosmannia clavigera kw1407]
Length = 461
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 146/284 (51%), Gaps = 58/284 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAP----VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P W+EV ++ MR+ G A VD MG + A D + RR+H L++LMLSSQTKD
Sbjct: 172 PTDWEEVYGLVKAMRQAGGAAAEAAVDTMGCERLALADASARDRRFHTLVALMLSSQTKD 231
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
VN AM RL+ GL +EN+ L +LI VGF K +++K A++
Sbjct: 232 TVNAVAMARLQAELPAHRPGAPAGLNLENMLAVEPAELNRLIWQVGFHNNKTRYLKQAAE 291
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQ 270
L+ ++ DIP T + L LPGVGPKMA+LC++ H W V GIG
Sbjct: 292 QLRDRWDGDIPPTADGLMALPGVGPKMAYLCLSAEHGWNRVEGIG--------------- 336
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK----VFKTPEDTRKELESWLPESL 326
VDVHVHRI++ GW + KTPE TR L+SWLP
Sbjct: 337 --------------------VDVHVHRITNLWGWQRPGSPAAKTPESTRLALQSWLPRDR 376
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQG-KKELAE 367
W E+N LLVGFGQ++C Q C C + LCP +K++AE
Sbjct: 377 WKELNWLLVGFGQKVCLPQGAKCGVCTVGLRGLCPAADRKKVAE 420
>gi|326471890|gb|EGD95899.1| DNA repair protein Ntg1 [Trichophyton tonsurans CBS 112818]
Length = 421
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 141/279 (50%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + + ++ MR ++ APVD MG +P RR+H LI+LMLSSQTKD V
Sbjct: 94 PPNWQAIYDTVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 153
Query: 166 HAAMGRL------------------KEH-----GLTIENICNTSEDVLGKLIIPVGFWKT 202
A M RL ++H LT+EN+ S + L +LI VGF
Sbjct: 154 AATMLRLHTQLTDETSDNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 213
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW GIG
Sbjct: 214 KTRYIKATAEILRDKFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIG------- 266
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K KTPE TR LESWL
Sbjct: 267 ----------------------------VDVHVHRITNLWGWNKT-KTPEATRAALESWL 297
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 298 PRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTG 333
>gi|326477245|gb|EGE01255.1| DNA repair protein Ntg1 [Trichophyton equinum CBS 127.97]
Length = 421
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 141/279 (50%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + + ++ MR ++ APVD MG +P RR+H LI+LMLSSQTKD V
Sbjct: 94 PPNWQAIYDTVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 153
Query: 166 HAAMGRL------------------KEH-----GLTIENICNTSEDVLGKLIIPVGFWKT 202
A M RL ++H LT+EN+ S + L +LI VGF
Sbjct: 154 AATMLRLHTQLTDETSDNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 213
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW GIG
Sbjct: 214 KTRYIKATAEILRDKFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIG------- 266
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K KTPE TR LESWL
Sbjct: 267 ----------------------------VDVHVHRITNLWGWNKT-KTPEATRAALESWL 297
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 298 PRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTG 333
>gi|119497831|ref|XP_001265673.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
gi|119413837|gb|EAW23776.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
Length = 432
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 69/279 (24%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR++ APVD MG +P +R+ LI+LMLSSQTKD V
Sbjct: 143 PSNWETIYSMVKKMRENNPTAPVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKDTVT 202
Query: 166 HAAMGRL--------------------------------KEHGLTIENICNTSEDVLGKL 193
AM RL ++ L +ENI S + L +L
Sbjct: 203 AVAMQRLHTELGNGRAPAEDPIVKKEEQEDIDLKSSQPQRDSTLNLENILAVSPEKLNEL 262
Query: 194 IIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTG 253
I VGF K K+IK A++IL+ YN+DIP+T E L KLPGVGPKMA+LCM+ AWG G
Sbjct: 263 IRTVGFHNNKTKYIKAAAEILRDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGKDEG 322
Query: 254 IGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPED 313
IG VDVHVHRI++ GW K KTPE+
Sbjct: 323 IG-----------------------------------VDVHVHRITNLWGWHKT-KTPEE 346
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
TR LESWLP W E+N LLVG GQ +C C C
Sbjct: 347 TRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGEC 385
>gi|391871378|gb|EIT80538.1| endonuclease III [Aspergillus oryzae 3.042]
Length = 347
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 145/292 (49%), Gaps = 70/292 (23%)
Query: 94 IPDENDTKKTKWEPAHWKEVLNNIREMRK-HGDAPVDAMGWDHSANVDIAPEVRRYHVLI 152
I DE+ + K + P++W + +++MR+ + APVD MG +P RR+ L+
Sbjct: 54 IKDEDGSFKVE-PPSNWDTIYATVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLV 112
Query: 153 SLMLSSQTKDEVNHAAMGRL--------------------------------KEHGLTIE 180
+LMLSSQTKD V AM RL ++ L +E
Sbjct: 113 ALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEKPLRDSTLNLE 172
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
NI S + L +LI VGF K K+IK A+ IL+ Y +DIP+T E L KLPGVGPKMA
Sbjct: 173 NILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMKLPGVGPKMA 232
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
+LCM+ AWG GIG VDVHVHRI++
Sbjct: 233 YLCMSAAWGKHEGIG-----------------------------------VDVHVHRITN 257
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
GW K KTPEDTRK LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 258 LWGWNKT-KTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDC 308
>gi|238494694|ref|XP_002378583.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
gi|220695233|gb|EED51576.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
Length = 347
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 145/292 (49%), Gaps = 70/292 (23%)
Query: 94 IPDENDTKKTKWEPAHWKEVLNNIREMRK-HGDAPVDAMGWDHSANVDIAPEVRRYHVLI 152
I DE+ + K + P++W + +++MR+ + APVD MG +P RR+ L+
Sbjct: 54 IKDEDGSFKVE-PPSNWDTIYATVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLV 112
Query: 153 SLMLSSQTKDEVNHAAMGRL--------------------------------KEHGLTIE 180
+LMLSSQTKD V AM RL ++ L +E
Sbjct: 113 ALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEKPLRDSTLNLE 172
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
NI S + L +LI VGF K K+IK A+ IL+ Y +DIP+T E L KLPGVGPKMA
Sbjct: 173 NILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMKLPGVGPKMA 232
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
+LCM+ AWG GIG VDVHVHRI++
Sbjct: 233 YLCMSAAWGKHEGIG-----------------------------------VDVHVHRITN 257
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
GW K KTPEDTRK LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 258 LWGWNKT-KTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDC 308
>gi|255939103|ref|XP_002560321.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584943|emb|CAP82982.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 428
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 74/279 (26%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMG-----WDHSANVDIAPEVRRYHVLISLMLSS 158
P++W+++ ++EMRK G DAPVD MG W S+ +D RR+ L++LMLSS
Sbjct: 154 PSNWEKMYGIVQEMRKDGPAADAPVDTMGCSQLFWRASSPID-----RRFQTLVALMLSS 208
Query: 159 QTKDEVNHAAMGRLK-------------------------EHGLTIENICNTSEDVLGKL 193
QTKD V AM RL + L + NI + L +L
Sbjct: 209 QTKDTVTAVAMQRLHTELGDGTAPAQDIKIKQEDDDSKTVDSTLNLNNILSVDPTRLNEL 268
Query: 194 IIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTG 253
I VGF K K+IK + IL+ + DIP+T E L LPGVGPKMA+LCM+ AWG G
Sbjct: 269 IRTVGFHNNKTKYIKATALILRDQHGGDIPSTPEGLMALPGVGPKMAYLCMSAAWGEHVG 328
Query: 254 IGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPED 313
IG VDVHVHRI++ GW K KTPE+
Sbjct: 329 IG-----------------------------------VDVHVHRITNLWGWNKT-KTPEE 352
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
TR+ L+SWLP + W E+NHLLVG GQ +C + C C
Sbjct: 353 TREALQSWLPRNKWHEINHLLVGLGQTVCLPVKRRCGDC 391
>gi|392894668|ref|NP_001254908.1| Protein NTH-1, isoform b [Caenorhabditis elegans]
gi|293324783|emb|CBK55599.1| Protein NTH-1, isoform b [Caenorhabditis elegans]
Length = 224
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 119/205 (58%), Gaps = 36/205 (17%)
Query: 155 MLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL 214
MLSSQT+DEVN AAM RLK+HGL+I I L ++ PVGF+K KA +++ + IL
Sbjct: 1 MLSSQTRDEVNAAAMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYLQKTAKIL 60
Query: 215 KKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRS 274
K +++ DIP++++ LC LPGVGPKMA+L M AWG GI
Sbjct: 61 KDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIA------------------- 101
Query: 275 ELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLL 334
VD HVHRIS+RLGW K TPE T+K LE LP+S W +NHLL
Sbjct: 102 ----------------VDTHVHRISNRLGWIKT-STPEKTQKALEILLPKSEWQPINHLL 144
Query: 335 VGFGQQICKSQRPSCETCLNKDLCP 359
VGFGQ C+ RP C TCL + CP
Sbjct: 145 VGFGQMQCQPVRPKCGTCLCRFTCP 169
>gi|327304823|ref|XP_003237103.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
gi|326460101|gb|EGD85554.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
Length = 460
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 140/279 (50%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ V ++ MR ++ APVD MG +P RR+H LI+LMLSSQTKD V
Sbjct: 134 PPNWQAVYETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 193
Query: 166 HAAMGRL------------------KEH-----GLTIENICNTSEDVLGKLIIPVGFWKT 202
A M RL ++H LT+EN+ S + L +LI VGF
Sbjct: 194 AATMLRLHTQLTDETSDNPVAEVWDRDHQKTTSTLTLENMLAVSPERLNELIRAVGFHNN 253
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW GIG
Sbjct: 254 KTRYIKATAEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWNKHEGIG------- 306
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K KTPE TR LESWL
Sbjct: 307 ----------------------------VDVHVHRITNLWGWNKT-KTPEATRAALESWL 337
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 338 PRDKWHEINKLLVGLGQTVCLPVGRRCTEC---DLSGTG 373
>gi|19114122|ref|NP_593210.1| DNA endonuclease III [Schizosaccharomyces pombe 972h-]
gi|1351660|sp|Q09907.1|NTH1_SCHPO RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|1065894|emb|CAA91893.1| DNA endonuclease III [Schizosaccharomyces pombe]
gi|62122683|dbj|BAD93307.1| DNA endonuclease III [Schizosaccharomyces pombe]
Length = 355
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/263 (41%), Positives = 137/263 (52%), Gaps = 42/263 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+EV + I +M+ APVD G H+ P+ R+ L++LMLSSQTKD V
Sbjct: 9 PENWREVYDEICKMKAKVVAPVDVQGC-HTLGERNDPKKFRFQTLVALMLSSQTKDIVLG 67
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
M LKE GL +E+I N E L KLI VGF K ++K + IL + + DIP
Sbjct: 68 PTMRNLKEKLAGGLCLEDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGDIP 127
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+T+E L LPGVGPKM +LCM+ AW GIG
Sbjct: 128 DTVEDLMTLPGVGPKMGYLCMSIAWNKTVGIG---------------------------- 159
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI + L W KT E TR L+SWLP+ LW E+NH LVGFGQ IC
Sbjct: 160 -------VDVHVHRICNLLHWCNT-KTEEQTRAALQSWLPKELWFELNHTLVGFGQTICL 211
Query: 344 SQRPSCETCL--NKDLCPQGKKE 364
+ C+ C +K LCP KE
Sbjct: 212 PRGRRCDMCTLSSKGLCPSAFKE 234
>gi|346319387|gb|EGX88989.1| DNA repair protein Ntg1, putative [Cordyceps militaris CM01]
Length = 396
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 140/274 (51%), Gaps = 50/274 (18%)
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAP----VDAMGWDHSANVDIAPEVRRY 148
P D + T P+ W+E+ +R+MR G A VD MG + A+ + + +R+
Sbjct: 99 PAVDPETGETTVAPPSDWEEMYALVRKMRAPGGAAYGAAVDTMGCERLADRGCSEKDQRF 158
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVG 198
H LI+LM+SSQTKD VN M +L+ GL ++NI D L K+I VG
Sbjct: 159 HTLIALMMSSQTKDTVNAVVMRKLQTELPAHKPGAPVGLNLDNILAVDPDTLNKMIWAVG 218
Query: 199 FWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDE 258
F K K+IK A++IL+ +N DIP+TIE L LPGVGPKM +LC++ AWG GIG
Sbjct: 219 FHNNKTKYIKQAAEILRDEWNGDIPDTIEGLTALPGVGPKMGYLCLSAAWGKTEGIG--- 275
Query: 259 SRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKEL 318
VDVHVHRI++ GW K PE TR L
Sbjct: 276 --------------------------------VDVHVHRITNMWGW-HATKNPEATRLAL 302
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
+SWLP W E+N LLVG GQ +C C +C
Sbjct: 303 QSWLPRDRWREINGLLVGLGQAVCVPVGQRCGSC 336
>gi|290983237|ref|XP_002674335.1| predicted protein [Naegleria gruberi]
gi|284087925|gb|EFC41591.1| predicted protein [Naegleria gruberi]
Length = 316
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 135/236 (57%), Gaps = 38/236 (16%)
Query: 110 WKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
+ E ++E RK +APVD MG A+ + + +R+ VL+SLMLSSQTKD++ AA
Sbjct: 96 FNEQYEALKEYRKKNLNAPVDTMGCSVLADSNADEKTQRFQVLVSLMLSSQTKDQITAAA 155
Query: 169 MGRLKEHG-LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
+ +L+E+ L++ + SE + LI PVGF+K K+ ++K IL + Y++DIP T++
Sbjct: 156 VRKLQENNVLSVAEMNKLSEKEIQDLIYPVGFYKRKSTYLKKVCKILLEKYDSDIPKTVK 215
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
LC LPGVGPKMA+LCM+ A GIG
Sbjct: 216 ELCDLPGVGPKMAYLCMSSALKQTVGIG-------------------------------- 243
Query: 288 QLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+RL W KTPE TR +LE ++P+ W +NH+LVGFGQ +CK
Sbjct: 244 ---VDTHVHRISNRLEWVNT-KTPEQTRMKLEEFVPQEEWDVINHMLVGFGQTVCK 295
>gi|190345325|gb|EDK37193.2| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 150/295 (50%), Gaps = 63/295 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWD--------HSANVDIAPEVRRYHVLISLMLSS 158
P +W +V N++ EMR +PVD MG + H + +P R+ +LISLMLSS
Sbjct: 183 PKNWDKVYNSVVEMRAKFMSPVDTMGCERIPSKIRPHGFD---SPRTYRFQLLISLMLSS 239
Query: 159 QTKDEVNHAAMGRLKE--------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
QTKDEVN AA+ L + +GL +E + TSE + + I VGF KA +IK A
Sbjct: 240 QTKDEVNFAAIKTLDDELMKRGFPNGLCLEAVLATSEQDINQCIQKVGFHHRKAGYIKRA 299
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
S +L N++ DIP+ I + LPGVGPKM +L + W GIG
Sbjct: 300 SQMLHDNHSGDIPDNIRDIVALPGVGPKMGYLLLQRGWYKNEGIG--------------- 344
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSE 329
VDVH+HR++ GW +TPE TR ELESWLP LW +
Sbjct: 345 --------------------VDVHIHRLAQMWGWVSAKARTPEQTRLELESWLPRRLWGD 384
Query: 330 VNHLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL------AERVKKSPKKR 376
+N +LVGFGQ IC +C+ C + LC K+L A+R+K+ ++R
Sbjct: 385 INPILVGFGQVICPPNYGNCDICTLGKQKLCKGANKKLVNSGITADRIKRLQRQR 439
>gi|399216845|emb|CCF73532.1| unnamed protein product [Babesia microti strain RI]
Length = 392
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 154/295 (52%), Gaps = 38/295 (12%)
Query: 70 TLYKSEKLGKRTLLKKQNVHNK-DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPV 128
T S+K R+L N+ + +PI T + + ++ ++ N I MRK+ +APV
Sbjct: 130 TTESSKKSINRSLSHSMNIEYECEPIKFIQATPEDSAKLENFDKIWNAIVSMRKNFNAPV 189
Query: 129 DAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL-TIENICNTSE 187
D+MG + + E +R+ LI+ +LSSQTKD + A+ L+ GL TIE I S
Sbjct: 190 DSMGAHCLGDKNADVETQRFQYLIACLLSSQTKDNITSEAINNLRNSGLLTIEKILTASV 249
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
+ + K I VGF TKAK++K +IL+ ++ IP+ L LPG+GPKMAHL +
Sbjct: 250 EEIDKHIGKVGFHNTKAKNLKKICEILRDKFDKKIPDNFNDLTSLPGIGPKMAHLILQLG 309
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV 307
+G V GI VDVHV+RI++RLGW K
Sbjct: 310 FGKVEGIA-----------------------------------VDVHVNRIANRLGWVKS 334
Query: 308 FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+PE TR++LE +P+ W+++N LLVGFGQ IC P C TCL CP G+
Sbjct: 335 -NSPEGTREQLEKIIPKKFWAQLNVLLVGFGQMICTKAGPGCSTCLANSYCPVGR 388
>gi|298709647|emb|CBJ31456.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 289
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 142/292 (48%), Gaps = 66/292 (22%)
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGW----DHSANVDIAPEVRRY 148
PIP E +K W+E + IR +R+ DA VD G D SA + + R+
Sbjct: 33 PIPTEPPQEK-------WREQMEGIRSVRRSRDAAVDFAGAGALRDSSAGSE---DDVRF 82
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENI------CNTSEDVLGKLIIPVGFWKT 202
VL+S MLSSQTKD V A + R+++ ED L +L+ PV F KT
Sbjct: 83 QVLMSAMLSSQTKDPVTAAGLNRMRQACAPAPLGAAALLATGMDEDALTELLHPVSFKKT 142
Query: 203 KAKHIKMASDILKKNYNN----DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDE 258
KAKHI M L + + IP+T+E L +LPGVGPKM +L M+ AWG GI
Sbjct: 143 KAKHILMVCKRLAEAEDGRQAGAIPDTVEGLLELPGVGPKMTYLVMDVAWGRNEGI---- 198
Query: 259 SRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF-------KTP 311
CVD HVHRIS+RLGW + + P
Sbjct: 199 -------------------------------CVDTHVHRISNRLGWVDTWNRNRPKAQNP 227
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
E TRK L+ WLP WSEVN LLVGFGQQ+C + RPSC C LCP +
Sbjct: 228 EKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATRPSCSACGISGLCPSADR 279
>gi|302506539|ref|XP_003015226.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
gi|291178798|gb|EFE34586.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
Length = 1131
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + ++ MR ++ APVD MG +P RR+H LI+LMLSSQTKD V
Sbjct: 94 PPNWQAMYETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 153
Query: 166 HAAMGRL------------------KEH-----GLTIENICNTSEDVLGKLIIPVGFWKT 202
A M RL ++H LT+EN+ S + L +LI VGF
Sbjct: 154 AATMLRLHTQLTDETSNNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 213
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW GIG
Sbjct: 214 KTRYIKATAEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIG------- 266
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K KTPE TR LESWL
Sbjct: 267 ----------------------------VDVHVHRITNLWGWNKT-KTPEATRAALESWL 297
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 298 PRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTG 333
>gi|50310813|ref|XP_455429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644565|emb|CAG98137.1| KLLA0F07711p [Kluyveromyces lactis]
Length = 391
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 145/284 (51%), Gaps = 56/284 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH----------SANVDIAPEVRRYHVLISLML 156
P+++ + + +R MR PVD +G + ++ P+ R +L+SLML
Sbjct: 84 PSNFVSIYSKVRFMRSMIKTPVDNVGCAMLPITINGVFGISKSNMQPKNYRLQLLVSLML 143
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
SSQTKDEVN AM + E+ G+T+ ++ E +L K I VGF KA +I
Sbjct: 144 SSQTKDEVNAKAMHNIMEYCMEELGDPEGITLGSLLKIEEKILDKEIYSVGFHTRKASYI 203
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A+ +L+ ++ D+P TIE LPGVGPKM +L + +W + GIG
Sbjct: 204 KKAAVMLRDQFDGDVPTTIEGFMSLPGVGPKMGYLALQKSWAKIDGIG------------ 251
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPES 325
VDVHV R++ W KV KTPE TRK+LESWLP S
Sbjct: 252 -----------------------VDVHVDRLAKMWKWVDPKVCKTPEHTRKQLESWLPRS 288
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERV 369
LW E+N +LVGFGQ +C + CE CL D+CP K+L + V
Sbjct: 289 LWYEINPVLVGFGQVLCMPRSKRCELCLVNDICPGVDKKLLKLV 332
>gi|453089077|gb|EMF17117.1| DNA glycosylase, partial [Mycosphaerella populorum SO2202]
Length = 267
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 142/273 (52%), Gaps = 48/273 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W+++ MRK APVD MG + A +P RR L++LMLSSQTKD V
Sbjct: 1 PFNWQQMYECAALMRKKVIAPVDTMGCESLAEAHCSPVDRRLQTLVALMLSSQTKDTVTA 60
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
AM +L+E G ++ + + + L +LI PVGF K +IK + ILK+ ++ DIP
Sbjct: 61 VAMKQLQEGLPGGFNLDALLHVQPEALNRLIYPVGFHNRKTIYIKQVAVILKEQFDGDIP 120
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+IE L LPGVGPKMA+L M+ AWG GIG
Sbjct: 121 QSIEGLMSLPGVGPKMAYLTMSAAWGRDEGIG---------------------------- 152
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VDVHVHRI++ W K TPE +R ELESWLP W E+NHLLVG GQ IC
Sbjct: 153 -------VDVHVHRITNLWHWHKT-STPEHSRVELESWLPREKWHEINHLLVGLGQTICL 204
Query: 344 SQRPSCETC-LNKD-LCPQGKKELAERVKKSPK 374
C+ C L K LCP V++SP+
Sbjct: 205 PIGRKCDECDLGKQKLCPSA-------VERSPR 230
>gi|296806475|ref|XP_002844047.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
gi|238845349|gb|EEQ35011.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
Length = 371
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 145/298 (48%), Gaps = 67/298 (22%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + ++ MR+ APVD MG +P RR+ LI+LMLSSQTKD V
Sbjct: 90 PPNWEAIYETVKRMRESNPTAPVDTMGCSELYWRSSSPRDRRFQTLIALMLSSQTKDTVT 149
Query: 166 HAAMGRLKEH--------------------------GLTIENICNTSEDVLGKLIIPVGF 199
AAM +L LT+EN+ S L +LI VGF
Sbjct: 150 AAAMQKLHTQLADETADDKDKPVSEVWDHDHQAAPSTLTLENVLAVSPARLNELIGAVGF 209
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
K K+IK ++IL+ + +DIP+TI+ L +LPGVGPKMA+LCM+ AW GIG
Sbjct: 210 HNNKTKYIKATAEILRDEFGSDIPSTIQGLTRLPGVGPKMAYLCMSSAWNRHEGIG---- 265
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELE 319
VDVHVHRI++ GW K KTPE TR LE
Sbjct: 266 -------------------------------VDVHVHRITNLWGWNKT-KTPEATRAALE 293
Query: 320 SWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
SWLP W E+N LLVG GQ +C C C DL G +AE K+PKK++
Sbjct: 294 SWLPRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTGLC-IAEVRPKAPKKKR 347
>gi|68067789|ref|XP_675828.1| endonuclease III [Plasmodium berghei strain ANKA]
gi|56495233|emb|CAH95547.1| endonuclease iii homologue, putative [Plasmodium berghei]
Length = 246
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 141/265 (53%), Gaps = 39/265 (14%)
Query: 94 IPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLIS 153
+ +END K K + N I+EMRK+ +APVD G + + R+ LIS
Sbjct: 3 LKNENDIKTKK---KIFMLTYNKIKEMRKNINAPVDKYGCHMLSEQTDDLKNFRFQTLIS 59
Query: 154 LMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
+LSS+TKDEV M RLK+HGL +ENI T E+ L KLI VGF+ K+K I I
Sbjct: 60 CLLSSRTKDEVTAMVMDRLKKHGLNVENILKTPEEELKKLIFGVGFYNVKSKQIIKICQI 119
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
LK+ YN+DIP+ E L KLPG+G K++ L + A GI
Sbjct: 120 LKEKYNSDIPHNYEELIKLPGIGEKVSQLILQTALNKHEGIA------------------ 161
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VD+HVHRIS+RL W K DT+ +L+S++ + LWSE+NHL
Sbjct: 162 -----------------VDIHVHRISNRLNWVYT-KNELDTQIKLKSFVDKELWSELNHL 203
Query: 334 LVGFGQQICKSQRPSCETCLNKDLC 358
LVGFGQ ICK ++P C C D C
Sbjct: 204 LVGFGQVICKGKKPLCGKCTLTDYC 228
>gi|389584671|dbj|GAB67403.1| endonuclease III homologue [Plasmodium cynomolgi strain B]
Length = 391
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 134/249 (53%), Gaps = 36/249 (14%)
Query: 108 AHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
AH+ I +MRKH APVD G ++ + +V R+ L+S MLS++TKD+
Sbjct: 171 AHFLRTYEKISKMRKHIVAPVDKYGCHMLSDKTESAKVYRFQTLVSCMLSTRTKDKNTAM 230
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
AM +LK HGLT++N+ TSE+ L KLI VGF+ KA+ I S IL+ Y+ DIP T+E
Sbjct: 231 AMEKLKAHGLTVQNMLRTSEEELKKLIQSVGFYNIKARQIIQISQILRDKYDYDIPRTLE 290
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L KLPG+G K+ HL + A GI
Sbjct: 291 ELLKLPGIGQKVGHLILQTALNTHEGI--------------------------------- 317
Query: 288 QLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRP 347
VD+HVHRIS+RL W K T+ +LES++P +LWSE+N LVGFGQ +CK++ P
Sbjct: 318 --AVDIHVHRISNRLNWV-CTKNESVTQSKLESYVPRALWSELNKTLVGFGQVVCKAKSP 374
Query: 348 SCETCLNKD 356
C C D
Sbjct: 375 LCTMCAVAD 383
>gi|302679652|ref|XP_003029508.1| hypothetical protein SCHCODRAFT_78397 [Schizophyllum commune H4-8]
gi|300103198|gb|EFI94605.1| hypothetical protein SCHCODRAFT_78397, partial [Schizophyllum
commune H4-8]
Length = 225
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 138/264 (52%), Gaps = 47/264 (17%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---G 176
MR A VD MG + + P RR L+SLMLSSQTKDEV AA+ +L+
Sbjct: 1 MRDGIVAVVDTMGCHMAQQGETDPRARRLVTLVSLMLSSQTKDEVTDAAIKKLRAALGGS 60
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
+T+E + ++ + I VGFW K +I A+ L+ +++ D+P T + L L GVG
Sbjct: 61 ITLEALLKADKETIEGAINKVGFWPKKTGYIMEAAKTLRDDFDGDVPKTAKELQSLKGVG 120
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LC+ AWGI GIG VDVHVH
Sbjct: 121 PKMAYLCLQAAWGINDGIG-----------------------------------VDVHVH 145
Query: 297 RISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNK 355
RI++RL W TPE TR LESWLP+ LW ++NH+LVGFGQ+IC P C+ C +
Sbjct: 146 RITNRLKWHNPPTNTPEATRANLESWLPKELWGDINHMLVGFGQEICYPVNPRCDQCTLR 205
Query: 356 D--LCPQGKKELAERVKKSPKKRK 377
D LCP ++ + SP KRK
Sbjct: 206 DMGLCPSAQQNV------SPTKRK 223
>gi|46137371|ref|XP_390377.1| hypothetical protein FG10201.1 [Gibberella zeae PH-1]
Length = 465
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 146/286 (51%), Gaps = 55/286 (19%)
Query: 107 PAHWKEVLNNIREMRKHGD----APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+ + + +R+MR G A VD MG + A+ +P+ +R+H L++LMLSSQTKD
Sbjct: 185 PSDWEVIYDTVRKMRAPGGRAHGAAVDTMGCERLADEKASPKDQRFHTLVALMLSSQTKD 244
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI--KMA 210
VN M +L+ GL + N+ L + I VGF K K +
Sbjct: 245 TVNAVVMRKLQTELPPFEPGAPPGLNLNNVLAIDPKTLNEFIWAVGFHNNKTKFVLPPST 304
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
++IL+ ++ DIP+TIE L LPGVGPKM +LC++ AWG GIG
Sbjct: 305 AEILRDQWDGDIPDTIEGLVSLPGVGPKMGYLCLSVAWGKHEGIG--------------- 349
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEV 330
VDVHVHRI++ GW K K PE+TR L+SWLP+ W E+
Sbjct: 350 --------------------VDVHVHRITNLWGWHKT-KNPEETRTTLQSWLPQDRWHEI 388
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
NHLLVG GQ +C C C DL QG + A+R K S ++
Sbjct: 389 NHLLVGLGQSVCLPVGRKCGEC---DLGLQGLCKAADRAKVSAGRK 431
>gi|302652772|ref|XP_003018229.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
gi|291181848|gb|EFE37584.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
Length = 1112
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 140/279 (50%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + ++ MR ++ APVD MG +P RR+H LI+LMLSSQTKD V
Sbjct: 121 PPNWQVMYETVKRMRERNPTAPVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVT 180
Query: 166 HAAMGRL------------------KEH-----GLTIENICNTSEDVLGKLIIPVGFWKT 202
A M RL ++H LT+EN+ S + L +LI VGF
Sbjct: 181 AATMLRLHTQLTDETSDNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNN 240
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW GIG
Sbjct: 241 KTRYIKATAEILRDQFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIG------- 293
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K KTPE TR LESWL
Sbjct: 294 ----------------------------VDVHVHRITNLWGWNKT-KTPEATRAALESWL 324
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 325 PRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTG 360
>gi|403223295|dbj|BAM41426.1| endonuclease III [Theileria orientalis strain Shintoku]
Length = 426
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 136/260 (52%), Gaps = 39/260 (15%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
++ +V N I R APVD G A E + L++ MLSSQTKDEV +
Sbjct: 203 NFTKVWNGIANKRNKELAPVDQYGSHCLAEQGKDFE---FQTLVACMLSSQTKDEVTASC 259
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M +LK+ GLT+EN+ L LI VGF TK+K+IK ++ILK+ Y +P+ +
Sbjct: 260 MEKLKKRGLTLENMLKMEVSELDSLISKVGFHATKSKNIKKVAEILKEKYGGKVPSNKKD 319
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L LPG+GPKMA+L A+ IV GI
Sbjct: 320 LESLPGIGPKMANLIQQIAFNIVDGIA--------------------------------- 346
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VD+HVHRI++RLGW K KTPE+TR +LE LP+SLWSEVN LLVGFGQ C + P
Sbjct: 347 --VDLHVHRITNRLGWVKT-KTPEETRVKLEELLPKSLWSEVNPLLVGFGQTFCTAAGPG 403
Query: 349 CETCLNKDLCPQGKKELAER 368
C TC CP G L R
Sbjct: 404 CPTCPVNKWCPTGISNLRNR 423
>gi|358388627|gb|EHK26220.1| hypothetical protein TRIVIDRAFT_17977, partial [Trichoderma virens
Gv29-8]
Length = 249
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 149/284 (52%), Gaps = 53/284 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAP----VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD 162
P+ W+E+ N +R+MR G A VD MG + A+ + +P+ +R H LI+LMLSSQTKD
Sbjct: 3 PSDWEEMYNVVRKMRAPGGAAYGAAVDTMGCERLADRNASPKDQRLHSLIALMLSSQTKD 62
Query: 163 EVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
V M +L+ GL ++N+ ++L ++I VGF K K+IK ++
Sbjct: 63 TVTAVVMRKLQTELPAYKPGAPVGLNLDNLLAVDANLLNEMIWAVGFHNNKTKYIKKTAE 122
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
IL+ +N DIP+T+E L LPGVGPKMA+LC++ AW GIG
Sbjct: 123 ILRDEWNGDIPDTVEGLTSLPGVGPKMAYLCLSVAWNRTEGIG----------------- 165
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNH 332
VDVHVHRI++ GW K K PE+TR L+SWLP W E+N
Sbjct: 166 ------------------VDVHVHRITNMWGWNKT-KNPEETRLALQSWLPHDRWREING 206
Query: 333 LLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
LLVG GQ +C C C DL QG + AER K +R
Sbjct: 207 LLVGLGQSVCLPVGRRCGEC---DLGLQGLCKAAERKKVLEGRR 247
>gi|255713108|ref|XP_002552836.1| KLTH0D02552p [Lachancea thermotolerans]
gi|238934216|emb|CAR22398.1| KLTH0D02552p [Lachancea thermotolerans CBS 6340]
Length = 383
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 158/329 (48%), Gaps = 67/329 (20%)
Query: 76 KLGKRTLLKKQNVHNKD-----PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDA 130
K+G T N KD P+ DE P ++ + + IR MR + PVD
Sbjct: 57 KMGSDTYYDWVNARTKDEITYAPLKDEPHF------PRNFVPIYSKIRLMRSKIETPVDH 110
Query: 131 MG-------WDHSANVD---IAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH----- 175
+G H ++ I P R+ +LI+LMLSSQTKDEVN AM L E+
Sbjct: 111 VGCAMIPMTVGHEFGIEQEQITPRTYRFQLLIALMLSSQTKDEVNAKAMFNLVEYCKEEL 170
Query: 176 ----GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCK 231
G+T++ + ++ + +LI PV F+ KA +IK ++L+ N++ D+P I L
Sbjct: 171 GEPEGVTLDAMFKIDQETIAQLIYPVSFYTRKALYIKKTIELLRDNFDGDMPPDIAGLVS 230
Query: 232 LPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCV 291
LPGVGPKM +L + AWG V GIG V
Sbjct: 231 LPGVGPKMGYLALQKAWGKVDGIG-----------------------------------V 255
Query: 292 DVHVHRISHRLGWTKV--FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
DVHV R+ W K+PE TRK LE WLP W E+N +LVGFGQ IC + C
Sbjct: 256 DVHVDRLCKMWKWVDPSKAKSPEHTRKLLEEWLPYEYWYEINPVLVGFGQVICLPRGKRC 315
Query: 350 ETCLNKDLCPQGKKELAERVKKSPKKRKS 378
+ C+ D+C ++L ++V+ ++RKS
Sbjct: 316 DLCMASDVCNAADQKLLQKVRNPKEERKS 344
>gi|317149841|ref|XP_001823231.2| hypothetical protein AOR_1_1642114 [Aspergillus oryzae RIB40]
Length = 886
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 143/292 (48%), Gaps = 70/292 (23%)
Query: 94 IPDENDTKKTKWEPAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLI 152
I DE+ + K + P++W + +++MR+ APVD MG +P RR+ L+
Sbjct: 127 IKDEDGSFKVE-PPSNWDTIYATVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLV 185
Query: 153 SLMLSSQTKDEVNHAAMGRL--------------------------------KEHGLTIE 180
+LMLSSQTKD V AM RL ++ L +E
Sbjct: 186 ALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEKPLRDSTLNLE 245
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
NI S + L +LI VGF K K+IK A+ IL+ Y +DIP+T E L KLPGVG KMA
Sbjct: 246 NILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMKLPGVGLKMA 305
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
+LCM+ AWG GIG VDVHVHRI++
Sbjct: 306 YLCMSAAWGKHEGIG-----------------------------------VDVHVHRITN 330
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
GW K KTPEDTRK LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 331 LWGWNKT-KTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDC 381
>gi|321260781|ref|XP_003195110.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii
WM276]
gi|317461583|gb|ADV23323.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
gattii WM276]
Length = 452
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 147/283 (51%), Gaps = 53/283 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHS-ANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
PA W+E I +MR+ APVD MG + N + P+ R+H+LISLMLSSQTKD V
Sbjct: 118 PAKWEEQYQLIEKMRRGFVAPVDEMGCERPRTNAEGDPKTFRFHILISLMLSSQTKDAVT 177
Query: 166 HAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL---KKNYN 219
AA+ L GLT ++ + + + I VGFW+ KA++I+ A+ L + +
Sbjct: 178 SAAVTSLHTSLPGGLTAASLATAPLETIQECINKVGFWRRKAEYIQEAAKSLLEQEGDEK 237
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
D+P T+E LCKL GVGPKMA L + AW I GIG
Sbjct: 238 GDVPKTVEGLCKLKGVGPKMAFLALQCAWDINAGIG------------------------ 273
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VDVHVHRI++RL W + TPE TR L+SWLP L +N L+VGFG
Sbjct: 274 -----------VDVHVHRITNRLKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLMVGFG 322
Query: 339 QQICKSQRPSCETCL--NKDLCP--------QGKKELAERVKK 371
Q IC P C+ CL K++CP +G+KE+ K+
Sbjct: 323 QVICLPVGPRCDICLLGQKEICPSRVKGANSKGRKEVVYSFKE 365
>gi|226291738|gb|EEH47166.1| endonuclease III [Paracoccidioides brasiliensis Pb18]
Length = 474
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 153/329 (46%), Gaps = 97/329 (29%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+++ + ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 161 PLNWEKIYDTVKEMRRKNPTAPVDTMGCSQLYWRSSSPRERRFHILIALMLSSQTKDTVT 220
Query: 166 -------HAAMGR-------------LKEHG----------------------------- 176
H +G +K+ G
Sbjct: 221 ALAMQRLHTELGSERAGTDTDDGTQIIKKAGEGGIKVKAEAEAEAQDDQEMKELVWDHTK 280
Query: 177 ------LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLC 230
LT+ENI S L +LI +GF K K+IK A+ IL+ Y++DIP TIE L
Sbjct: 281 QQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPPTIEGLM 340
Query: 231 KLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLC 290
+LPGVGPKMA+LCM+ AWG GIG
Sbjct: 341 RLPGVGPKMAYLCMSSAWGRDEGIG----------------------------------- 365
Query: 291 VDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
VDVHVHRI++ GW K KTPE+TR LESWLP W E+N LLVG GQ +C C
Sbjct: 366 VDVHVHRITNLWGWHKT-KTPEETRAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCG 424
Query: 351 TC--LNKDLCPQGKKELAERVKKSPKKRK 377
C LC K E+ V K K+RK
Sbjct: 425 ECELAGSGLC---KSEVKGWVGKVKKERK 450
>gi|295667235|ref|XP_002794167.1| endonuclease III [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286273|gb|EEH41839.1| endonuclease III [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 153/329 (46%), Gaps = 97/329 (29%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+++ ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 161 PSNWEKIYETVKEMRRKNPTAPVDTMGCSQLYWRSSSPRDRRFHILIALMLSSQTKDTVT 220
Query: 166 -------HAAMGR-------------LKEHG----------------------------- 176
H +G +K+ G
Sbjct: 221 ALAMQRLHTELGSEQGGTDTDDGTRIIKKAGEGKIKVEAEAEAEAQEDQEMKGLVWDHTK 280
Query: 177 ------LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLC 230
LT+ENI S L +LI +GF K K+IK A+ IL+ Y++DIP TIE L
Sbjct: 281 QQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPPTIEGLM 340
Query: 231 KLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLC 290
+LPGVGPKMA+LCM+ AWG GIG
Sbjct: 341 RLPGVGPKMAYLCMSSAWGRDEGIG----------------------------------- 365
Query: 291 VDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
VDVHVHRI++ GW K KTPE+TR LESWLP W E+N LLVG GQ +C C
Sbjct: 366 VDVHVHRITNLWGWHKT-KTPEETRAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCG 424
Query: 351 TC--LNKDLCPQGKKELAERVKKSPKKRK 377
C LC K E+ V K K+RK
Sbjct: 425 ECELAGSGLC---KSEVKGWVGKVKKERK 450
>gi|426200731|gb|EKV50655.1| hypothetical protein AGABI2DRAFT_217472 [Agaricus bisporus var.
bisporus H97]
Length = 249
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 135/252 (53%), Gaps = 41/252 (16%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---G 176
MR H AP D MG + S + + P+ R+ L+ LMLSSQTKDE+ AA+ +LK
Sbjct: 1 MRSHFTAPADTMGCEQSKHKENDPKNSRFTTLVYLMLSSQTKDEITDAAVTKLKAAVGGT 60
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
L+I+ I + E + I VGFW+ KA +IK + L ++++D+P T++ LC LPGVG
Sbjct: 61 LSIDAIVSAEESTVSAAINKVGFWRRKAGYIKQTAQRLLHDFDSDVPKTVKELCSLPGVG 120
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA L ++ AW I TGIG VD HVH
Sbjct: 121 PKMAILALHVAWDINTGIG-----------------------------------VDSHVH 145
Query: 297 RISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--L 353
RI++ LGW K K+ E+TR L+SWLP E+N LLVGFGQ IC +P C+TC
Sbjct: 146 RITNLLGWHNKPTKSAEETRLSLQSWLPAEFHREINGLLVGFGQVICLPTKPHCDTCKLS 205
Query: 354 NKDLCPQGKKEL 365
+ LCP +
Sbjct: 206 ARGLCPNARMAF 217
>gi|358375279|dbj|GAA91863.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 424
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 165/355 (46%), Gaps = 73/355 (20%)
Query: 34 EPKFQQTRCQLEKNIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDP 93
EP ++ + L N + +T K+ TL K+E + +KK+ + K
Sbjct: 71 EPPAKRRKSALSATSTRANARSSRRAVKTETPIKEETLVKAETSVEEAPVKKEPLE-KPS 129
Query: 94 IPDENDTKKTKWE--------PAHWKEVLNNIREMRK-HGDAPVDAMGWDHSANVDIAPE 144
+K K E P++W+ + + +++MR+ + APVD MG +P
Sbjct: 130 KARRTPARKIKTEDGAYSMQPPSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPR 189
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRL---------------------------KEHGL 177
RR+ L++LMLSSQTKD V AM RL K+ L
Sbjct: 190 DRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDQSTSIVKKEPEEYDWKPTDQVKDSTL 249
Query: 178 TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGP 237
+ENI + + L +LI VGF K K+IK A+ IL+ Y++DIP+T L KLPGVGP
Sbjct: 250 NLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYDSDIPSTATELMKLPGVGP 309
Query: 238 KMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHR 297
KMA LCM+ AWG GIG VDVHVHR
Sbjct: 310 KMAFLCMSAAWGKHEGIG-----------------------------------VDVHVHR 334
Query: 298 ISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
I++ GW K K PE+TR LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 335 ITNLWGWHKT-KNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 388
>gi|409046617|gb|EKM56097.1| hypothetical protein PHACADRAFT_162146 [Phanerochaete carnosa
HHB-10118-sp]
Length = 191
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 127/218 (58%), Gaps = 39/218 (17%)
Query: 126 APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENI 182
APVD MG + + ++ P R LISLMLSSQTKDEV AA+ +L+E +T+E I
Sbjct: 8 APVDTMGCEQAQVKEVDPRACRISTLISLMLSSQTKDEVTDAAVSKLREAVGGTITVEAI 67
Query: 183 CNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHL 242
+ E+ + I VGFW+ K ++IK + L+ +++D+P T++ LC LPGVGPKMA L
Sbjct: 68 LSADENAIADAIAKVGFWRRKTQYIKQTAQKLRDEFDSDVPKTVDELCSLPGVGPKMAFL 127
Query: 243 CMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRL 302
C++ AW I GIG VDVHVHRI++RL
Sbjct: 128 CLHVAWNINVGIG-----------------------------------VDVHVHRITNRL 152
Query: 303 GWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
GW K KTPE+TR L+SWLP+ L +E+NH LVGFGQ
Sbjct: 153 GWHKPPTKTPEETRLNLQSWLPKELHAEINHRLVGFGQ 190
>gi|68476685|ref|XP_717635.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
gi|68476832|ref|XP_717561.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439276|gb|EAK98596.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439353|gb|EAK98672.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
Length = 320
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 151/292 (51%), Gaps = 57/292 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWD---HSANVDIA---PEVRRYHVLISLMLSSQT 160
P W E+ N + MR APVD G + ++ N +I P++ R+ +LISLMLSSQT
Sbjct: 53 PPKWSEIYNQLVWMRSKFFAPVDTQGCERMPNTINRNIKTRNPKIYRFQLLISLMLSSQT 112
Query: 161 KDEVNHAAM-----GRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
KDEVN+ AM G LK H GL IE++ SE + I VGF KA++I+ I
Sbjct: 113 KDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFHNRKAQYIRKTCSI 172
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L +N++ DIP TIE + LPGVGPKM L + WGI GIG
Sbjct: 173 LMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIG------------------ 214
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNH 332
VDVH+HR++ GW TPE R EL+ WLP+ W+++N
Sbjct: 215 -----------------VDVHLHRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINP 257
Query: 333 LLVGFGQQICKSQRPSCETC-LNKD-LCPQGKKELA------ERVKKSPKKR 376
L+VGFGQ IC + +C+ C L +D LC K+L ER+ K K+R
Sbjct: 258 LVVGFGQVICVPRAANCDICTLARDGLCKGVNKKLLKTPLSEERINKLSKQR 309
>gi|225679960|gb|EEH18244.1| endonuclease III lyase [Paracoccidioides brasiliensis Pb03]
Length = 474
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 150/326 (46%), Gaps = 94/326 (28%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+++ + ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 161 PLNWEKIYDTVKEMRRKNPTAPVDTMGCSQLYWRSSSPRERRFHILIALMLSSQTKDTVT 220
Query: 166 -------HAAMGR-------------LKEHG----------------------------- 176
H +G +K+ G
Sbjct: 221 ALAMQRLHTELGSERAGTDTDDGTQIIKKAGEGGIKVKAEAEAEAQEDQEMKELVWDHTK 280
Query: 177 ------LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLC 230
LT+ENI S L +LI +GF K K+IK A+ IL+ Y++DIP TIE L
Sbjct: 281 QQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPPTIEGLM 340
Query: 231 KLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLC 290
+LPGVGPKMA+LCM+ AWG GIG
Sbjct: 341 RLPGVGPKMAYLCMSSAWGRDEGIG----------------------------------- 365
Query: 291 VDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
VDVHVHRI++ GW K KTPE+TR LESWLP W E+N LLVG GQ +C C
Sbjct: 366 VDVHVHRITNLWGWHKT-KTPEETRAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCG 424
Query: 351 TC--LNKDLCPQGKKELAERVKKSPK 374
C LC K +VKK K
Sbjct: 425 ECELAGSGLCKSEVKGWVGKVKKERK 450
>gi|354546368|emb|CCE43098.1| hypothetical protein CPAR2_207410 [Candida parapsilosis]
Length = 361
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 136/276 (49%), Gaps = 53/276 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVR-------RYHVLISLMLSSQ 159
P W + N I EMR APVD G + N I P ++ R+ +LISLMLSSQ
Sbjct: 94 PPAWTTIYNEIVEMRSKFHAPVDGQGCESMPNT-ITPGLKLSDPKRYRFQLLISLMLSSQ 152
Query: 160 TKDEVNHAAM-------GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASD 212
TKDEVN+ AM G G +E + S + I VGF KA++I
Sbjct: 153 TKDEVNYDAMVNLNTGLGNKHAQGFCLEAMSQLSPPEIDSYICKVGFHNRKAQYIAKTCQ 212
Query: 213 ILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQIS 272
ILK ++ DIP TIE + KLPGVGPKM +L + WGI +GIG
Sbjct: 213 ILKSEFDGDIPKTIEEIVKLPGVGPKMGYLLLQAGWGINSGIG----------------- 255
Query: 273 RSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVN 331
VDVH+HR++ GW +K TPE R ELESW+P+ WS++N
Sbjct: 256 ------------------VDVHLHRLALLWGWVSKKATTPEKCRLELESWIPKKYWSDIN 297
Query: 332 HLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL 365
L+VGFGQ +C + +C+ C K LC K L
Sbjct: 298 PLIVGFGQVVCVPRASNCDICALGRKGLCSAANKNL 333
>gi|7021393|gb|AAF35322.1|AF222908_2 Ntg1 [Candida albicans]
Length = 311
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 151/292 (51%), Gaps = 57/292 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWD---HSANVDIA---PEVRRYHVLISLMLSSQT 160
P W E+ N + MR APVD G + ++ N +I P++ R+ +LISLMLSSQT
Sbjct: 53 PPKWSEIYNQLVWMRSKFFAPVDTQGCERMPNTINRNIKTRNPKIYRFQLLISLMLSSQT 112
Query: 161 KDEVNHAAM-----GRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
KDEVN+ AM G LK H GL IE++ SE + I VGF KA++I+ I
Sbjct: 113 KDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFHNRKAQYIRKTCSI 172
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L +N++ DIP TIE + LPGVGPKM L + WGI GIG
Sbjct: 173 LMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIG------------------ 214
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNH 332
VDVH+HR++ GW TPE R EL+ WLP+ W+++N
Sbjct: 215 -----------------VDVHLHRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINP 257
Query: 333 LLVGFGQQICKSQRPSCETC-LNKD-LCPQGKKELA------ERVKKSPKKR 376
L+VGFGQ IC + +C+ C L +D LC K+L ER+ K K+R
Sbjct: 258 LVVGFGQVICVPRAANCDICTLARDGLCKGVNKKLLKTPLSEERINKLSKQR 309
>gi|238878754|gb|EEQ42392.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 320
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 150/292 (51%), Gaps = 57/292 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWD---HSANVDIA---PEVRRYHVLISLMLSSQT 160
P W E+ N + MR APVD G + ++ N +I P++ R+ +LISLMLSSQT
Sbjct: 53 PPKWSEIYNQLVWMRSKFFAPVDTQGCERMPNTINRNIKTRNPKIYRFQLLISLMLSSQT 112
Query: 161 KDEVNHAAM-----GRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
KDEVN+ AM G LK H GL IE++ SE + I VGF KA++I+ I
Sbjct: 113 KDEVNYEAMKNLHNGLLKVHPDGLCIESVLKLSESEIDAYIKKVGFHNRKAQYIRKTCSI 172
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L +N+ DIP TIE + LPGVGPKM L + WGI GIG
Sbjct: 173 LMENHGGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGIG------------------ 214
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNH 332
VDVH+HR++ GW TPE R EL+ WLP+ W+++N
Sbjct: 215 -----------------VDVHLHRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINP 257
Query: 333 LLVGFGQQICKSQRPSCETC-LNKD-LCPQGKKELA------ERVKKSPKKR 376
L+VGFGQ IC + +C+ C L +D LC K+L ER+ K K+R
Sbjct: 258 LVVGFGQVICVPRAANCDICTLARDGLCKGVNKKLLKTPLSEERINKLSKQR 309
>gi|224005196|ref|XP_002296249.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
gi|209586281|gb|ACI64966.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
Length = 202
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 130/235 (55%), Gaps = 36/235 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+++ + + E+R APVD G + + V RY VL++LMLSSQTKD V
Sbjct: 4 PFGWEDIYSLVNELRSDRSAPVDTDGGEALPEKHLGEVVHRYQVLMALMLSSQTKDAVVG 63
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
M L++HGLT+ENI T ++L KLI VGF K K+IK A++I+ YN DIP+T
Sbjct: 64 ETMRSLQKHGLTVENIHKTDSELLNKLIGKVGFHNNKTKYIKQATEIIITQYNGDIPSTA 123
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
+ L LPGVGPKMA++ + A+G VTGIG
Sbjct: 124 DELMTLPGVGPKMAYIVESVAFGTVTGIG------------------------------- 152
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
VD H+HRI ++L W K PE TR++LE WLP W EVN L VGFGQ++
Sbjct: 153 ----VDTHMHRIFNQLAWVDS-KNPEGTREQLEGWLPRDKWDEVNVLWVGFGQEV 202
>gi|403350158|gb|EJY74527.1| hypothetical protein OXYTRI_04215 [Oxytricha trifallax]
Length = 372
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 139/273 (50%), Gaps = 42/273 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+++ + I MR APVD+MG A+ + P + LI LMLSSQTKDEV
Sbjct: 20 PEDWQKLWDVIMVMRSENPAPVDSMGSSCLADSNATPNEFAFQTLIGLMLSSQTKDEVTA 79
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
A+G L ++GL+I+ I E L +LI VGF KA ++K A+ + ++Y +P+
Sbjct: 80 EAVGILLQNGLSIKMIDEIKEQDLNRLIEKVGFHNKKAIYLKKAARQIIEDYKGIVPSDY 139
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
+ L LPGVGPKMAHL + + + GI
Sbjct: 140 DKLIALPGVGPKMAHLLLQNCFDKTVGIS------------------------------- 168
Query: 287 PQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD HVHRI++RL W K KTP +T K L+ WLP+ W ++N +LVGFGQ ICK
Sbjct: 169 ----VDTHVHRIANRLKWVPKQTKTPGETAKALQEWLPQDKWEKINWMLVGFGQMICKPI 224
Query: 346 RPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
P C C +DLCP E K P K KS
Sbjct: 225 GPRCYECKARDLCP------FEPKSKPPTKSKS 251
>gi|146419315|ref|XP_001485620.1| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 148/295 (50%), Gaps = 63/295 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWD--------HSANVDIAPEVRRYHVLISLMLSS 158
P +W +V N + EMR +PVD MG + H + +P R+ +LISLML S
Sbjct: 183 PKNWDKVYNLVVEMRAKFMSPVDTMGCERIPLKIRPHGFD---SPRTYRFQLLISLMLLS 239
Query: 159 QTKDEVNHAAMGRLKE--------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
QTKDEVN AA+ L + +GL +E + TSE + + I VGF KA +IK A
Sbjct: 240 QTKDEVNFAAIKTLDDELMKRGFPNGLCLEAVLATSEQDINQCIQKVGFHHRKAGYIKRA 299
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
S +L N++ DIP+ I + LPGVGPKM +L + W GIG
Sbjct: 300 SQMLHDNHSGDIPDNIRDIVALPGVGPKMGYLLLQRGWYKNEGIG--------------- 344
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSE 329
VDVH+HR++ GW +TPE TR ELESWLP LW +
Sbjct: 345 --------------------VDVHIHRLAQMWGWVSAKARTPEQTRLELESWLPRRLWGD 384
Query: 330 VNHLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL------AERVKKSPKKR 376
+N +LVGFGQ IC +C+ C + LC K+L A+R+K+ ++R
Sbjct: 385 INPILVGFGQVICPPNYGNCDICTLGKQKLCKGANKKLVNSGITADRIKRLQRQR 439
>gi|407927433|gb|EKG20326.1| hypothetical protein MPH_02340 [Macrophomina phaseolina MS6]
Length = 278
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 130/245 (53%), Gaps = 41/245 (16%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---G 176
MR APVD MG + A+ +P +R L++LMLSSQTKD V AM L+++ G
Sbjct: 1 MRSRIVAPVDTMGCESLADRKDSPVDQRLQTLVALMLSSQTKDTVTAVAMKNLQDNLPGG 60
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
++ + L LI VGF K K+IK +++L+ ++ DIP+TIE L LPGVG
Sbjct: 61 FNLQALIQVEPARLNSLIEKVGFHNNKTKYIKQTAELLRDRFDGDIPDTIEGLVSLPGVG 120
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 121 PKMAYLCMSAAWGRDEGIG-----------------------------------VDVHVH 145
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LN 354
RI++ GW K +TPE+TR LE+WLP+ W +NHLLVGFGQ IC C C
Sbjct: 146 RITNLWGWHKT-RTPEETRAALEAWLPKDKWHAINHLLVGFGQTICLPVGRKCGECTLAE 204
Query: 355 KDLCP 359
K LCP
Sbjct: 205 KGLCP 209
>gi|123505745|ref|XP_001329048.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121911998|gb|EAY16825.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 238
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 132/249 (53%), Gaps = 41/249 (16%)
Query: 114 LNNIREMRKHGDAPVDAMGWD-HSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL 172
L+ + E RK APVD +G S VD P+ R+ LISLMLSS TKD+ AA+ +L
Sbjct: 12 LHTLIEYRKSHPAPVDTLGCGTQSEKVD--PKTERFQTLISLMLSSMTKDQQTSAAVRKL 69
Query: 173 K--EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLC 230
+ E GL N+ DV+ + I VGF K KA +I A+ I + YN+DIP T++ L
Sbjct: 70 QQMEGGLNAPNLMKADYDVVLECIKSVGFAKKKAGYIIEAAKICHEKYNDDIPKTLKELT 129
Query: 231 KLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLC 290
GVG KM L M H WG GIG
Sbjct: 130 SFNGVGVKMGTLAMAHCWGEQIGIG----------------------------------- 154
Query: 291 VDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
VDVHVHRIS+ LGW K K P+DT L+ LP+ +WSEVNH LVGFGQ IC +++P C+
Sbjct: 155 VDVHVHRISNLLGWVKT-KKPDDTELALQKILPKEIWSEVNHTLVGFGQTICDAKKPKCD 213
Query: 351 TCLNKDLCP 359
C KD CP
Sbjct: 214 ECPIKDTCP 222
>gi|343425282|emb|CBQ68818.1| related to NTG1-DNA repair protein [Sporisorium reilianum SRZ2]
Length = 525
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 140/286 (48%), Gaps = 59/286 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMG-------------WDHSANVDIAPEVRRYHVLIS 153
P HW+ V + R+ APVD MG W + + A + R L+S
Sbjct: 212 PEHWERVYTLLAHQRRKIIAPVDTMGCEENGRQDRRADAWRATETPEDAAKRERLATLVS 271
Query: 154 LMLSSQTKDEVNHAAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
LMLSSQTKD V A+ L+ GL + ++ S++ + I VGFW+ K ++K A
Sbjct: 272 LMLSSQTKDPVTAEAVYNLQRTLRGGLCLASLLAASDETISHCIAKVGFWRRKTGYLKSA 331
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
+ IL ++ D+P T++ LC LPGVGPKMA L ++ + GI GIG
Sbjct: 332 ARILASDFGGDVPRTVDELCSLPGVGPKMAFLALS-SMGIQVGIG--------------- 375
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEV 330
VD HVHR+++RLGW +TPE TR L+SWLP L E+
Sbjct: 376 --------------------VDTHVHRLTNRLGW-HTTRTPEQTRLNLQSWLPAELHGEI 414
Query: 331 NHLLVGFGQQICKSQRPSCETC--LNKDLCPQGK----KELAERVK 370
N LLVGFGQ IC P C+ C LCP + K A+RVK
Sbjct: 415 NRLLVGFGQVICVPVGPRCDLCSVAAAGLCPSARVVDEKSAAKRVK 460
>gi|317037839|ref|XP_001402439.2| hypothetical protein ANI_1_176174 [Aspergillus niger CBS 513.88]
Length = 843
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 141/292 (48%), Gaps = 66/292 (22%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR+ APVD MG +P RR+ LI+LMLSSQTKD V
Sbjct: 133 PSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVT 192
Query: 166 HAAMGRL---------------------------KEHGLTIENICNTSEDVLGKLIIPVG 198
AM RL K+ L +ENI + + L +LI VG
Sbjct: 193 AVAMQRLHTELGDQSTTIVKKEPEDYDWKPTDQVKDSTLNLENILAVTPERLNELIAKVG 252
Query: 199 FWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDE 258
F K K+IK A+ IL+ Y++DIP+T L KLPGVGPKMA LCM+ AWG GIG
Sbjct: 253 FHNNKTKYIKAAAIILRDQYDSDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIG--- 309
Query: 259 SRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKEL 318
VDVHVHRI++ GW K K PE+TR L
Sbjct: 310 --------------------------------VDVHVHRITNLWGWHKT-KNPEETRMAL 336
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELAER 368
ESWLP+ W E+N LLVG GQ +C C C LC K L R
Sbjct: 337 ESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECDLAGTKLCKSEIKGLVSR 388
>gi|315045922|ref|XP_003172336.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
gi|311342722|gb|EFR01925.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
Length = 417
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 136/279 (48%), Gaps = 63/279 (22%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +W+ + +++MR ++ APVD MG P RR+H LI+LMLSSQTKD V
Sbjct: 94 PPNWQAIYETVKQMRERNPTAPVDTMGCAELYWQSSPPRDRRFHTLIALMLSSQTKDTVT 153
Query: 166 HAAMGRLKEH-----------------------GLTIENICNTSEDVLGKLIIPVGFWKT 202
AAM RL L +EN+ S + L +LI VGF
Sbjct: 154 AAAMMRLHTQLTDETHDKPVAEVWDRAHQMAPSTLNLENMLAVSPERLNELIGAVGFHNN 213
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K ++IK ++IL+ +++DIP+T+E L LPGVGPKMA+LCM+ AW G+G
Sbjct: 214 KTRYIKATAEILRDRFDSDIPSTVEGLISLPGVGPKMAYLCMSSAWNRHEGVG------- 266
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VDVHVHRI++ GW K K PE TR LESWL
Sbjct: 267 ----------------------------VDVHVHRITNLWGWHKT-KNPEATRAALESWL 297
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W E+N LLVG GQ +C C C DL G
Sbjct: 298 PRDKWHEINKLLVGLGQTVCLPVGRRCAEC---DLSGTG 333
>gi|443898423|dbj|GAC75758.1| endonuclease III [Pseudozyma antarctica T-34]
Length = 537
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 138/271 (50%), Gaps = 55/271 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMG-------------WDHSANVDIAPEVRRYHVLIS 153
PA W++V + + R APVD MG W S + + A + R L+S
Sbjct: 222 PAQWEKVYELLTKQRARIVAPVDTMGCEENGRSDRRADSWRESESSEDAAKRERLATLVS 281
Query: 154 LMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
LMLSSQTKD V A+ L+ + GL ++++ + +D + I VGFW+ K ++K A
Sbjct: 282 LMLSSQTKDPVTAEAVYNLQRNLPNGLCLQSLLDADDDAISSCIAKVGFWRRKTGYLKSA 341
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
+ IL +++ D+P T++ LC LPGVGPKMA L ++ + GI GIG
Sbjct: 342 ARILAADFDGDVPRTVDELCSLPGVGPKMAFLALS-SMGIQVGIG--------------- 385
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEV 330
VD HVHR+++RLGW KTPE TR L+SWLP L +
Sbjct: 386 --------------------VDTHVHRMTNRLGWHDT-KTPEQTRLNLQSWLPRELHPHI 424
Query: 331 NHLLVGFGQQICKSQRPSCETC--LNKDLCP 359
N LLVGFGQ IC P C+ C + LCP
Sbjct: 425 NRLLVGFGQVICVPTGPRCDLCNVGSAGLCP 455
>gi|171692077|ref|XP_001910963.1| hypothetical protein [Podospora anserina S mat+]
gi|170945987|emb|CAP72788.1| unnamed protein product [Podospora anserina S mat+]
Length = 1171
Score = 172 bits (435), Expect = 3e-40, Method: Composition-based stats.
Identities = 115/290 (39%), Positives = 150/290 (51%), Gaps = 57/290 (19%)
Query: 107 PAHWKEVLNNIREMRKHG---DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
P+ W+EV N ++EMR +G +A VD MG + A+ + RR+H L++LMLSSQTKD
Sbjct: 170 PSDWEEVYNLVKEMRINGPAANAAVDTMGCERLADPSSTVKDRRFHTLVALMLSSQTKDT 229
Query: 164 VNHAAMGRLKEH----------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
VN AM RL GL + N+ + VL +LI VGF K K++ + I
Sbjct: 230 VNAEAMKRLHTELPPFEPGAPAGLNLNNMLHCPPAVLNELIGKVGFHNNKTKYLLQTAQI 289
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQPILSPSSRQI 271
LK +N DIP TIE L LPGVGPKMAHLCM+ + W V GIG
Sbjct: 290 LKDKFNGDIPPTIEGLVSLPGVGPKMAHLCMSAENGWNRVEGIG---------------- 333
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPESLWSE 329
VDVHVHRI++ GW K KTPE+TR L+SWLP+ W E
Sbjct: 334 -------------------VDVHVHRITNYWGWNGPKETKTPEETRMALQSWLPKDKWKE 374
Query: 330 VNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKKELAERVKKSPKKRK 377
+N LLVG GQ +C C C K LC + ++V + K+R+
Sbjct: 375 INWLLVGLGQSVCLPVGRRCGDCEVGLKGLCKAADR---KKVNEGKKRRE 421
>gi|255727965|ref|XP_002548908.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
gi|240133224|gb|EER32780.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
Length = 331
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 135/275 (49%), Gaps = 51/275 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANV------DIAPEVRRYHVLISLMLSSQT 160
P W ++ N + MR PVD G + N P + R+ +LISLMLSSQT
Sbjct: 63 PKGWVQIYNEVVSMRSKFLGPVDFQGCERMPNTINPGVQTRNPRIYRFQLLISLMLSSQT 122
Query: 161 KDEVNHAAM-----GRLKEH--GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
KDEVN+ AM G LK H GL IE++ S + I VGF K+++IK DI
Sbjct: 123 KDEVNYEAMKSLHEGLLKSHPEGLCIESLSKLSAAEIDSYINKVGFHNRKSQYIKKTCDI 182
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L + D+P TI + KLPG+GPKM +L + + WGI GIG
Sbjct: 183 LLSQHGGDVPKTISEIVKLPGLGPKMGYLFLQNGWGINDGIG------------------ 224
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNH 332
VDVH+HR++ GW TPE R ELE WLP+ W ++N
Sbjct: 225 -----------------VDVHLHRLAQMWGWVSPKANTPEKARIELEKWLPKEYWGQINP 267
Query: 333 LLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL 365
LLVGFGQ +C + P+C+ C K +C K+L
Sbjct: 268 LLVGFGQVVCVPRSPNCDVCTLGRKGICKSANKKL 302
>gi|350633857|gb|EHA22221.1| hypothetical protein ASPNIDRAFT_50950 [Aspergillus niger ATCC 1015]
Length = 907
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 136/274 (49%), Gaps = 64/274 (23%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR+ APVD MG +P RR+ LI+LMLSSQTKD V
Sbjct: 146 PSNWETMYDMVKKMREANPTAPVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVT 205
Query: 166 HAAMGRL---------------------------KEHGLTIENICNTSEDVLGKLIIPVG 198
AM RL K+ L +ENI + + L +LI VG
Sbjct: 206 AVAMQRLHTELGDQSTTIVKKEPEDYDWKPTDQVKDSTLNLENILAVTPERLNELIAKVG 265
Query: 199 FWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDE 258
F K K+IK A+ IL+ Y++DIP+T L KLPGVGPKMA LCM+ AWG GIG
Sbjct: 266 FHNNKTKYIKAAAIILRDQYDSDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIG--- 322
Query: 259 SRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKEL 318
VDVHVHRI++ GW K K PE+TR L
Sbjct: 323 --------------------------------VDVHVHRITNLWGWHKT-KNPEETRMAL 349
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
ESWLP+ W E+N LLVG GQ +C C C
Sbjct: 350 ESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 383
>gi|149247468|ref|XP_001528146.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448100|gb|EDK42488.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 408
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 141/277 (50%), Gaps = 54/277 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVR-------RYHVLISLMLSSQ 159
P +W ++ N + E+R APVD G + N I P ++ R+ +LISLMLSSQ
Sbjct: 139 PTNWVKIYNEVVELRSKFFAPVDHQGCESMPNT-ITPNLKTKDPKKYRFQLLISLMLSSQ 197
Query: 160 TKDEVNHAAMGRLKEH--------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
TKDEVN+ AM +L+ G +E++ S + + I VGF KA++I+ A
Sbjct: 198 TKDEVNYDAMVKLERGLLRHFPKLGFCLESMSKLSPNEIDAYIAKVGFHNRKAQYIQKAC 257
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
IL ++N DIP TI+ + KLPGVGPKM +L + WGI GIG
Sbjct: 258 QILINDFNGDIPKTIQEIVKLPGVGPKMGYLLLQCGWGINLGIG---------------- 301
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEV 330
VDVH+HR++ W T TPE R ELESWLP+ W +V
Sbjct: 302 -------------------VDVHLHRLAEMWHWVTPKASTPEKCRLELESWLPKKYWIDV 342
Query: 331 NHLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKEL 365
N L+VGFGQ IC + P+C+ C K LC K L
Sbjct: 343 NPLMVGFGQVICVPRAPNCDICSLGRKGLCKAADKRL 379
>gi|425781088|gb|EKV19070.1| DNA repair protein Ntg1, putative [Penicillium digitatum PHI26]
gi|425783221|gb|EKV21080.1| DNA repair protein Ntg1, putative [Penicillium digitatum Pd1]
Length = 419
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 148/304 (48%), Gaps = 77/304 (25%)
Query: 107 PAHWKEVLNNIREMRK-HGDAPVDAMG-----WDHSANVDIAPEVRRYHVLISLMLSSQT 160
P++W+ + +++MR + APVD MG W S+ +D RR+ LI+LMLSSQT
Sbjct: 146 PSNWETMYEIVKKMRAANPTAPVDTMGCAELYWRASSPID-----RRFQTLIALMLSSQT 200
Query: 161 KDEVNHAAMGRL-------------------------KEHGLTIENICNTSEDVLGKLII 195
KD V AM RL + L + NI L +LI
Sbjct: 201 KDTVTAVAMQRLHTELGDATPPAQDITIKQEDDDSNPTDSTLNLSNILAVDPTRLNELIR 260
Query: 196 PVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
VGF K K+IK A+ IL+ +N DIP+T E L LPGVGPKMA+LC++ AWG GIG
Sbjct: 261 TVGFHNNKTKYIKAAALILRDQHNGDIPSTPEGLMALPGVGPKMAYLCLSAAWGKHLGIG 320
Query: 256 KDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTR 315
VDVHVHRI++ GW K KTPE+TR
Sbjct: 321 -----------------------------------VDVHVHRITNLWGWNKT-KTPEETR 344
Query: 316 KELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCP---QGKKELAERVK 370
K L+SWLP W E+N LLVG GQ +C + C C LC +G + +VK
Sbjct: 345 KALQSWLPVEKWHEINKLLVGLGQTVCLPVKRRCGDCDLAGLQLCKSEIRGLEPTMLKVK 404
Query: 371 KSPK 374
KSP+
Sbjct: 405 KSPE 408
>gi|71027073|ref|XP_763180.1| endonuclease III [Theileria parva strain Muguga]
gi|68350133|gb|EAN30897.1| endonuclease III, putative [Theileria parva]
Length = 418
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 135/260 (51%), Gaps = 39/260 (15%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
++ +V N I R APVD G A+ E + L+ MLSSQTKDE+
Sbjct: 197 NFTKVWNCIANKRNKEIAPVDLYGCHCVAD---PGEHFEFQTLVGCMLSSQTKDEITALT 253
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M LK+ GLT++NI E+ L +I VGF KTKAK+IK A+ ILK Y +P+ +
Sbjct: 254 MKNLKKRGLTLDNILKMDEEELDSIISKVGFHKTKAKNIKKAAQILKDQYGGKVPSNKKD 313
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L LPG+GPKMA+L + A+ +V G+
Sbjct: 314 LESLPGIGPKMANLILQVAFNMVDGVA--------------------------------- 340
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VD+HVHRI++RLGW K KTPE+T +L+ LP+ LWS++N LLVGFGQ C + P
Sbjct: 341 --VDIHVHRITNRLGWVKT-KTPEETSLKLQELLPKDLWSKINPLLVGFGQTFCTAAGPG 397
Query: 349 CETCLNKDLCPQGKKELAER 368
C TC CP G L R
Sbjct: 398 CPTCPVNKWCPTGISNLRNR 417
>gi|358059574|dbj|GAA94731.1| hypothetical protein E5Q_01385 [Mixia osmundae IAM 14324]
Length = 784
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 143/278 (51%), Gaps = 47/278 (16%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSA-NVD--IAPEVRRYHVLISLMLSSQTKDE 163
P W+E + E RK APVD MG D + N+ I P RY LISLMLSSQTKD+
Sbjct: 471 PTRWQEQWRVLTEQRKTIIAPVDTMGCDKAGRNLKDIITPRDDRYQTLISLMLSSQTKDQ 530
Query: 164 VNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
V A L++ G IE+I S++ + I VGFW+ K +I+ S++L+ +++
Sbjct: 531 VTDEAASNLRDRIPGGFNIESILAASDEQISSCINKVGFWRRKTDYIRRTSEMLRDLHDS 590
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
D+P TI+ LC LPGVGPKM L + + GI GIG
Sbjct: 591 DVPKTIQELCDLPGVGPKMGFLSL-QSQGINGGIG------------------------- 624
Query: 281 KCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRI+HRL W K K E+TR LESWLP L +N LVGFGQ
Sbjct: 625 ----------VDTHVHRITHRLRWHRKEPKDAEETRLNLESWLPSELHGVINKTLVGFGQ 674
Query: 340 QICKSQRPSCETC-LNK-DLCPQGKKELAERVKKSPKK 375
+C P C+ C L K LCP K + +K+SP K
Sbjct: 675 AVCLPVGPRCDLCDLGKASLCPSRVK--VDTLKRSPSK 710
>gi|388855561|emb|CCF50784.1| related to NTG1-DNA repair protein [Ustilago hordei]
Length = 509
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 146/300 (48%), Gaps = 59/300 (19%)
Query: 93 PIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVD------------ 140
PI D + P HW+ V + + R APVD MG D + D
Sbjct: 178 PIKVNLDPSEAHPAPPHWETVYSLLSRQRTKIVAPVDTMGCDQNGRSDRRADFWRDTDTP 237
Query: 141 -IAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE---HGLTIENICNTSEDVLGKLIIP 196
A + R L+SLMLSSQTKD V A+ L+ GL ++++ ++ + I
Sbjct: 238 QDAAKRERLATLVSLMLSSQTKDPVTAEAVYNLQRTLPDGLCLKSLLEADDETISSCIAK 297
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
VGFW+ K ++K A+ ILK ++ D+P T++ LC LPGVGPKMA L ++ + GI GIG
Sbjct: 298 VGFWRRKTGYLKSAARILKDDFQGDLPRTVDELCSLPGVGPKMAFLALS-SMGIQIGIG- 355
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK 316
VD HVHR+++RLGW K TPE TR
Sbjct: 356 ----------------------------------VDTHVHRLTNRLGWHKT-TTPEQTRL 380
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGK----KELAERVK 370
L+SWLP+ L +++N LLVGFGQ IC P C+ C CP + K A+RVK
Sbjct: 381 NLQSWLPQELHAKINSLLVGFGQVICVPLGPRCDLCDVGKAGFCPSRRVVDEKSTAKRVK 440
>gi|260947100|ref|XP_002617847.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
gi|238847719|gb|EEQ37183.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
Length = 384
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 136/276 (49%), Gaps = 51/276 (18%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-------EVRRYHVLISLMLSS 158
+P +W + N + +MR PVD MG + IAP R+ +L+SLMLSS
Sbjct: 107 QPKNWNLIYNEVVKMRALIVTPVDTMGCERIPET-IAPGLIRRDPRAYRFRLLVSLMLSS 165
Query: 159 QTKDEVNHAAMGRLKEH-------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
QTKDEV + A+ L GL IE I ++E + I VGF + KA +IK AS
Sbjct: 166 QTKDEVTYVAVENLNNFYKTKGFDGLCIEAILKSTEAEIDFCIQKVGFHRRKAVYIKKAS 225
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
++L + +N DIP I+ LPGVGPKM HL + W I +GIG
Sbjct: 226 ELLNEKFNADIPKNIKDTISLPGVGPKMGHLLLQAGWRINSGIG---------------- 269
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVN 331
VDVH+HR++ GW PE TR LE WLP+ WS++N
Sbjct: 270 -------------------VDVHLHRLAQMWGWVPKSDKPESTRLALEDWLPKKYWSDIN 310
Query: 332 HLLVGFGQQICKSQRPSCETC-LNKDLCPQGKKELA 366
LLVGFGQ +C +C+ C L LC + K+L+
Sbjct: 311 PLLVGFGQTVCVPNAGNCDVCTLAAGLCSKANKKLS 346
>gi|254581382|ref|XP_002496676.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
gi|238939568|emb|CAR27743.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
Length = 360
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 136/273 (49%), Gaps = 56/273 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGW--------DHSA--NVDIAPEVRRYHVLISLML 156
P+++K + IR MR PVD +G H VDI P+ R +L +LML
Sbjct: 85 PSNFKTIYCKIRLMRSKLMTPVDTVGCASLPITVSGHCGIEQVDIEPKNYRLQLLTALML 144
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
SSQTKDEV AM + ++ G+T+E + E L +LI VGF KAK++
Sbjct: 145 SSQTKDEVTAQAMENIMQYSMEEFKITQGITLETLLRIDEKKLDELIKSVGFHTRKAKYV 204
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL +++DIP + + LPGVGPKM L + AWG + GIG
Sbjct: 205 KQMAQILVNTFDSDIPTDLPGILSLPGVGPKMGILALQKAWGKMDGIG------------ 252
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPES 325
VD+HV R+ GW K KTPE TRK+LESWLP
Sbjct: 253 -----------------------VDLHVDRLCKMWGWVDAKKCKTPEHTRKQLESWLPRE 289
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
LW E+N LLVGFGQ IC S+ C+ CL D+C
Sbjct: 290 LWYEINPLLVGFGQVICMSRGKRCDLCLANDVC 322
>gi|301105551|ref|XP_002901859.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
gi|262099197|gb|EEY57249.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
Length = 287
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 138/261 (52%), Gaps = 50/261 (19%)
Query: 121 RKHGDAPVDAMGWDHSANVDIAP-----EVRRYHVLISLMLSSQTKDEVNHAAMGRL--- 172
RK + +D G V +AP +V R+ +L++ +LSSQT+D + +AAM RL
Sbjct: 49 RKIMETSIDKFG----TQVCVAPGVTYAKVERFQLLVAALLSSQTQDPITYAAMQRLHQL 104
Query: 173 --KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLC 230
E GLTIE + + SE+ L + + PVGF+ KA +K + IL+ ++ DIP +++ L
Sbjct: 105 GESEEGLTIEVVQSVSEEKLSEALKPVGFYHRKAHQLKRVAAILRTRFHGDIPRSLDELL 164
Query: 231 KLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLC 290
+LPG+GPK+ + AWG V GI
Sbjct: 165 QLPGIGPKIGRVITLLAWGQVDGI-----------------------------------V 189
Query: 291 VDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCE 350
VD HVHR++ RLGW+ TPEDTRKELE W+P+ W +++ ++VGFGQ +C ++ PSC
Sbjct: 190 VDTHVHRLAQRLGWSST-TTPEDTRKELEDWIPKEHWGKLSLVVVGFGQTVCTAKHPSCS 248
Query: 351 TCLNKDLCPQGKKELAERVKK 371
C CP K +A KK
Sbjct: 249 KCPLATKCPSAFKVVASNSKK 269
>gi|444314257|ref|XP_004177786.1| hypothetical protein TBLA_0A04740 [Tetrapisispora blattae CBS 6284]
gi|387510825|emb|CCH58267.1| hypothetical protein TBLA_0A04740 [Tetrapisispora blattae CBS 6284]
Length = 447
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 141/286 (49%), Gaps = 62/286 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-------------PEVRRYHVLIS 153
P ++ + + IR MR PVD MG SA + I P R +L+
Sbjct: 124 PDNFLPIYSRIRLMRSKLKTPVDVMG---SAALPITVGGKCGLGKEVIKPINYRLQLLVG 180
Query: 154 LMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+MLS+QTKDEV AM + + G+T+E + ++VL +LI VGF KA
Sbjct: 181 VMLSAQTKDEVTAQAMLNITRYCIDELHNPAGITLETLLEIDQNVLDELIHSVGFHTRKA 240
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K IK + L++ +++DIP I+ L LPGVGPKM +L ++ AWG + GI
Sbjct: 241 KFIKETAKELQERFDSDIPTDIDGLLSLPGVGPKMGYLALHKAWGKLDGI---------- 290
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWL 322
CVDVHVHR+S W K KTPE TRK L+ WL
Sbjct: 291 -------------------------CVDVHVHRLSKLFNWVDPKKSKTPEHTRKALQEWL 325
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
P SLW E+N +LVGFGQ IC S+ C+ CL +C K+L +
Sbjct: 326 PRSLWYEINTVLVGFGQVICMSKGRRCDICLANTVCNAVDKKLVAK 371
>gi|168022853|ref|XP_001763953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684692|gb|EDQ71092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 138/260 (53%), Gaps = 39/260 (15%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH--GL 177
MR DAPVD G +++ +++ L++ M+SSQT+D V AAM RL+ GL
Sbjct: 1 MRMGKDAPVDLFGTHQLFDIEADKGTQQFQALVAAMISSQTRDAVTGAAMQRLRAMPGGL 60
Query: 178 TIENIC--NTSEDVLGKLIIPVGFWKTKAKHIK-MASDILKKNYNNDIPNTIELLCKLPG 234
+ +I + D L +++ PVGF++ KAK +K +A + +N +PN++E L KLPG
Sbjct: 61 NVAHIASDDVEIDALAEILKPVGFYRQKAKFMKSIAQSLAAPPHNGAVPNSLEELMKLPG 120
Query: 235 VGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVH 294
VGPK+A L + W + G+G++ L VD +
Sbjct: 121 VGPKVALLVL---W-VAFGMGEEG------------------------------LIVDTN 146
Query: 295 VHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN 354
V R+ RLGW TPE TR+ LESW+P S+W++ + L VGFGQQ+CK P CE C
Sbjct: 147 VRRVCSRLGWVPADATPELTRRTLESWMPRSMWADTSFLFVGFGQQVCKPLAPKCEGCKV 206
Query: 355 KDLCPQGKKELAERVKKSPK 374
LCP K+ +R + PK
Sbjct: 207 SQLCPSAFKQSPKRQTRKPK 226
>gi|320582064|gb|EFW96282.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase [Ogataea
parapolymorpha DL-1]
Length = 383
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 138/280 (49%), Gaps = 52/280 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA---PEVRRYHVLISLMLSSQTKDE 163
P H+ + N I++MR APVD MG + A +V R+ LISLMLSSQTKDE
Sbjct: 110 PPHFWPMYNEIKKMRSRIKAPVDEMGCANVATTVSGLSEGKVYRFQCLISLMLSSQTKDE 169
Query: 164 VNHAAMGRLK--------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
VN M L+ EHGL++E I + E VL +LI VGF + KA +IK ++IL
Sbjct: 170 VNFQVMKILQDYFISKGYEHGLSLEAILDIDELVLDQLIYKVGFHRRKATYIKQTANILH 229
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
+ YN +IP TIE + PGVGPKM L + AW I TGIG
Sbjct: 230 EKYNGEIPRTIEEITSFPGVGPKMGFLLLQIAWNINTGIG-------------------- 269
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK--TPEDTRKELES--WLPESLWSEVN 331
VD H+ R++ W K +PE R+ ES W + WS +N
Sbjct: 270 ---------------VDTHMQRMAKIFKWVPASKNMSPEYVRRCFESMLWDHKEEWSRIN 314
Query: 332 HLLVGFGQQICKSQRPSCETCL--NKDLCPQGKKELAERV 369
+LVGFGQ +C QRP C+ C +CP K L ++
Sbjct: 315 PILVGFGQVVCLPQRPRCDVCTLSRTGICPAVDKALLKKA 354
>gi|405121665|gb|AFR96433.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
var. grubii H99]
Length = 452
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 155/301 (51%), Gaps = 48/301 (15%)
Query: 69 NTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPV 128
N + K E++G +T K K P+P + K PA W+E I +MR+ APV
Sbjct: 83 NDVAKEEEVGTKTSPVKSPA--KKPLP-QVSLAKPHAAPAKWEEQYRLIEKMRRGIVAPV 139
Query: 129 DAMGWDHS-ANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICN 184
D MG + N + P+ R+H+LISLMLSSQTKD V AA+ L GL+ ++
Sbjct: 140 DDMGCERPRTNTEGDPKTFRFHILISLMLSSQTKDAVTSAAVTALHSSLPGGLSAASLAA 199
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDIL---KKNYNNDIPNTIELLCKLPGVGPKMAH 241
+ + + I VGFW+ KA++I+ A+ L + + D+P T+E LCKL GVGPKMA
Sbjct: 200 APLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEKGDVPKTVEGLCKLKGVGPKMAF 259
Query: 242 LCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHR 301
L + AW I GIG VDVHVHRI++R
Sbjct: 260 LALQCAWDINAGIG-----------------------------------VDVHVHRITNR 284
Query: 302 LGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL--NKDLC 358
L W + TPE TR L+SWLP L +N LLVGFGQ IC P C+ CL K++C
Sbjct: 285 LKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLLVGFGQVICLPVGPRCDICLLGQKEIC 344
Query: 359 P 359
P
Sbjct: 345 P 345
>gi|212526280|ref|XP_002143297.1| DNA repair protein Ntg1, putative [Talaromyces marneffei ATCC
18224]
gi|210072695|gb|EEA26782.1| DNA repair protein Ntg1, putative [Talaromyces marneffei ATCC
18224]
Length = 418
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 148/313 (47%), Gaps = 81/313 (25%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR APVD MG + P+ +R+H L++LMLSSQTKD V
Sbjct: 135 PSNWETMYDIVKKMRAANPTAPVDTMGCANLHWRTSPPKEQRFHTLVALMLSSQTKDTVT 194
Query: 166 HAAMGRL---------------------------------------KEHGLTIENICNTS 186
AM RL K+ LT++NI S
Sbjct: 195 AVAMQRLHTELGQEGEQNQTNASPSKPLIKKEEDDDTDGIKLGSANKDSTLTVQNILAVS 254
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
+ L ++I VGF K K+IK ++IL+ Y++DIP T E L KLPGVGPKMA+LCM+
Sbjct: 255 PERLNQMIWSVGFHNNKTKYIKQVAEILRDQYDSDIPTTPEELMKLPGVGPKMAYLCMSA 314
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
AWG GIG VDVHVHRI++ GW
Sbjct: 315 AWGKHEGIG-----------------------------------VDVHVHRITNMWGW-H 338
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG--KKE 364
K PE+TR L+SWLP W E+N LLVG GQ C C C DL G K E
Sbjct: 339 ATKNPEETRIALQSWLPRDKWHEINKLLVGLGQTACLPVGRKCGEC---DLAGTGLCKSE 395
Query: 365 LAERVKKSPKKRK 377
+ V K+ K+ K
Sbjct: 396 IRGMVAKTKKEVK 408
>gi|121711106|ref|XP_001273169.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
gi|119401319|gb|EAW11743.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
Length = 421
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 135/281 (48%), Gaps = 76/281 (27%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMG-----WDHSANVDIAPEVRRYHVLISLMLSSQT 160
P++W+ + +++MR+ APVD MG W S+ P RR+ LI+LMLSSQT
Sbjct: 135 PSNWETMYTMVKKMREDNPTAPVDTMGCANLHWRASS-----PRDRRFQTLIALMLSSQT 189
Query: 161 KDEVNHAAMGRL-----------------------------KEHGLTIENICNTSEDVLG 191
KD V AM RL ++ L +ENI S L
Sbjct: 190 KDTVTAVAMQRLHTELGDSNVHQDLIIKKEELEDEDSKIPERDSTLNLENILAVSPAKLN 249
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
+LI VGF K K+IK ++I++ Y +DIP++ L KLPGVGPKMA LCM+ AWG
Sbjct: 250 ELIRTVGFHNNKTKYIKATAEIIRDQYKSDIPSSATELMKLPGVGPKMAFLCMSAAWGKD 309
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTP 311
GIG VDVHVHRI++ GW K KTP
Sbjct: 310 EGIG-----------------------------------VDVHVHRITNLWGWHKT-KTP 333
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
E+TR LESWLP W E+N LLVG GQ +C C C
Sbjct: 334 EETRMALESWLPREKWHEINKLLVGLGQTVCLPVGRRCGEC 374
>gi|303313429|ref|XP_003066726.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106388|gb|EER24581.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 449
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 139/279 (49%), Gaps = 70/279 (25%)
Query: 109 HWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+W+++ + I++MR ++ APVD MG + + RR+H+L++LMLSSQTKD V
Sbjct: 172 NWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQERRFHILVALMLSSQTKDTVTAV 231
Query: 168 AMGRL-----KEHG----------------------------LTIENICNTSEDVLGKLI 194
AM RL +EH LTI NI S L +LI
Sbjct: 232 AMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTHSAGHSTLTISNILRVSATRLNQLI 291
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
VGF K K+++ + IL+ +YN+DIP T L LPGVGPKMA+LCM+ AWG+ GI
Sbjct: 292 QTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMALPGVGPKMAYLCMSSAWGVDDGI 351
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
G VDVHVHRI++ GW + KTPE+T
Sbjct: 352 G-----------------------------------VDVHVHRITNLWGWVRT-KTPEET 375
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL 353
R LE+WLP W E+N LLVG GQ +C C C+
Sbjct: 376 RVLLEAWLPREKWREINWLLVGLGQTVCLPVGRRCWECV 414
>gi|119191666|ref|XP_001246439.1| hypothetical protein CIMG_00210 [Coccidioides immitis RS]
gi|392864330|gb|EAS34840.2| DNA repair protein Ntg1 [Coccidioides immitis RS]
Length = 451
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 138/280 (49%), Gaps = 72/280 (25%)
Query: 109 HWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+W+++ + I++MR ++ APVD MG + + RR+H+L++LMLSSQTKD V
Sbjct: 172 NWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQERRFHILVALMLSSQTKDTVTAV 231
Query: 168 AMGRL-----KEHG------------------------------LTIENICNTSEDVLGK 192
AM RL +EH LTI NI S L +
Sbjct: 232 AMHRLHTELDREHDDGNNEDGGADASKKPAVRWDTTTHSAGHSTLTISNILRVSATRLNQ 291
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
LI VGF K K+++ + IL+ +YN+DIP T L LPGVGPKMA+LCM+ AWG+
Sbjct: 292 LIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMALPGVGPKMAYLCMSSAWGVDD 351
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPE 312
GIG VDVHVHRI++ GW + KTPE
Sbjct: 352 GIG-----------------------------------VDVHVHRITNLWGWVRT-KTPE 375
Query: 313 DTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
+TR LE+WLP W E+N LLVG GQ +C C C
Sbjct: 376 ETRVLLEAWLPREKWREINWLLVGLGQTVCLPVGRRCWEC 415
>gi|320036319|gb|EFW18258.1| DNA repair protein Ntg1 [Coccidioides posadasii str. Silveira]
Length = 449
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 138/278 (49%), Gaps = 70/278 (25%)
Query: 109 HWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+W+++ + I++MR ++ APVD MG + + RR+H+L++LMLSSQTKD V
Sbjct: 172 NWEKMYDLIKDMRLRNPTAPVDTMGCAELYWRNSTEQERRFHILVALMLSSQTKDTVTAV 231
Query: 168 AMGRL-----KEHG----------------------------LTIENICNTSEDVLGKLI 194
AM RL +EH LTI NI S L +LI
Sbjct: 232 AMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTHSAGHSTLTISNILRVSATRLNQLI 291
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
VGF K K+++ + IL+ +YN+DIP T L LPGVGPKMA+LCM+ AWG+ GI
Sbjct: 292 QTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMALPGVGPKMAYLCMSSAWGVDDGI 351
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
G VDVHVHRI++ GW + KTPE+T
Sbjct: 352 G-----------------------------------VDVHVHRITNLWGWVRT-KTPEET 375
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
R LE+WLP W E+N LLVG GQ +C C C
Sbjct: 376 RVLLEAWLPREKWREINWLLVGLGQTVCLPVGRRCWEC 413
>gi|367017866|ref|XP_003683431.1| hypothetical protein TDEL_0H03610 [Torulaspora delbrueckii]
gi|359751095|emb|CCE94220.1| hypothetical protein TDEL_0H03610 [Torulaspora delbrueckii]
Length = 406
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 139/272 (51%), Gaps = 55/272 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH-----SANVDIA-----PEVRRYHVLISLML 156
P ++ + +R MR PVD++G SA DI+ P+ R +L++LML
Sbjct: 98 PENFIPIYTRVRLMRSKIKTPVDSVGCAAIPITVSAKCDISLDAISPKNYRLQLLVALML 157
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
S+QTKDE+N AM L + GLT+E + E VL LI VGF KA ++
Sbjct: 158 SAQTKDELNAQAMLNLIRYCIDELHIPQGLTLEALLKIDEKVLVNLIRTVGFHNRKAHYV 217
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL + + +DIP + + LPGVGPKM L + AWG + GIG
Sbjct: 218 KQTAKILVEQFQSDIPTDLVGILSLPGVGPKMGLLALQRAWGKMDGIG------------ 265
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESL 326
VDVHVHR+ + GW +K KT + TRK+LESWLP+ L
Sbjct: 266 -----------------------VDVHVHRLCNMWGWVSKKCKTADHTRKDLESWLPKPL 302
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W E+N LLVGFGQ IC S+ C+ CL D+C
Sbjct: 303 WYEINPLLVGFGQVICMSRGKRCDLCLANDIC 334
>gi|396081889|gb|AFN83503.1| endonuclease III [Encephalitozoon romaleae SJ-2008]
Length = 265
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 139/263 (52%), Gaps = 53/263 (20%)
Query: 112 EVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
E+ I++ R++ +PVD MG + E RR+H+L+SL+LSSQTKDEV H AM R
Sbjct: 14 ELYFEIKKQRENIVSPVDTMGCFITPPYRTEEE-RRFHILVSLLLSSQTKDEVTHEAMER 72
Query: 172 LKE-------------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNY 218
L+E GLTIENI N+S D + + I VGF KA+++K ++ILKK
Sbjct: 73 LRELLPENAAIDDNIRRGLTIENIVNSSVDHINECIKRVGFHNKKAENLKKIAEILKKK- 131
Query: 219 NNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELIC 278
+P +E L LPG+G KMA L MNHA G V GI
Sbjct: 132 --GLPKRMEDLTSLPGIGNKMAILYMNHACGKVVGIS----------------------- 166
Query: 279 VRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VD HVHRIS+R+G K + EDTR+ LE +P+ W +N +LVG+G
Sbjct: 167 ------------VDTHVHRISNRIGLVKT-RDVEDTREGLEKIIPKKEWKTINRILVGYG 213
Query: 339 QQICKSQRPSCETCLNKDLCPQG 361
Q IC ++RP CE C + CP
Sbjct: 214 QTICVARRPRCEECCIRSRCPSS 236
>gi|71020263|ref|XP_760362.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
gi|46099986|gb|EAK85219.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
Length = 516
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 141/275 (51%), Gaps = 55/275 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSAN----VDI-----APEV----RRYHVLIS 153
P HW+EV + + R APVD MG + + D +PE R L+S
Sbjct: 230 PLHWEEVYALLAKQRTRIVAPVDTMGCEENGRQHRRADAHRARESPEASAKRERLATLVS 289
Query: 154 LMLSSQTKDEVNHAAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
LMLSSQTKD V A+ L+ +GL ++++ + +++ + I VGFW+ K ++K A
Sbjct: 290 LMLSSQTKDPVTAEAVYNLQRTLPNGLCLQSLLDADNEMISQCISKVGFWRRKTGYLKSA 349
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
+ IL ++ D+P T++ L LPGVGPKMA L ++ + GI GIG
Sbjct: 350 ARILADDFQGDVPRTVDELVSLPGVGPKMAFLALS-SMGIQVGIG--------------- 393
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEV 330
VD HVHR+++RLGW K KTPE+TR L+SWLP L + +
Sbjct: 394 --------------------VDTHVHRLTNRLGWHKT-KTPEETRLNLQSWLPTQLHANI 432
Query: 331 NHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKK 363
N LLVGFGQ IC P C+ C LCP +K
Sbjct: 433 NRLLVGFGQVICVPVGPRCDLCDVGRAGLCPSFRK 467
>gi|242780466|ref|XP_002479601.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
gi|218719748|gb|EED19167.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
Length = 448
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 140/299 (46%), Gaps = 75/299 (25%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + N +++MR APVD MG P+ +R+ L++LMLSSQTKD V
Sbjct: 134 PSNWETMYNIVKKMRAENPTAPVDTMGCAELHWRSSPPKDQRFQTLVALMLSSQTKDTVT 193
Query: 166 HAAMGRL------------------------------------KEHGLTIENICNTSEDV 189
AM RL K+ LT++N+ S +
Sbjct: 194 AVAMQRLHTELAQGGGSTNETKPLIKKEEDDDDKDGIKFNHEKKDSTLTVQNMLAVSPER 253
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
L +LI VGF K K+IK ++IL+ YN+DIP+T L LPGVGPKMA+LCM+ AWG
Sbjct: 254 LNELIRTVGFHNNKTKYIKQVANILRDQYNSDIPSTPVELMALPGVGPKMAYLCMSAAWG 313
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
GIG VDVHVHRI++ GW K
Sbjct: 314 KHEGIG-----------------------------------VDVHVHRITNLWGW-HTTK 337
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA 366
TPE+TR L+SWLP W E+N LLVG GQ +C C C LC K LA
Sbjct: 338 TPEETRIALQSWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECELAGTGLCKSEVKGLA 396
>gi|363749897|ref|XP_003645166.1| hypothetical protein Ecym_2637 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888799|gb|AET38349.1| Hypothetical protein Ecym_2637 [Eremothecium cymbalariae
DBVPG#7215]
Length = 364
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 141/301 (46%), Gaps = 56/301 (18%)
Query: 88 VHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSA---------- 137
V D + D + K + P + + + +R MR PVD++G
Sbjct: 63 VRASDVVSDSFNIKYSPSFPPTFLPIYSKVRLMRTKLVTPVDSVGCAMLPVTINEKFGIK 122
Query: 138 NVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSED 188
++ P+ R +L+SLMLSSQTKDE N AM L E+ G+T+ ++ E
Sbjct: 123 KYEMLPKNYRLQLLVSLMLSSQTKDETNAQAMYNLMEYCVDKLNIKQGITLNSLLEIEEK 182
Query: 189 VLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAW 248
L LI VGF K K+ +IK + +L + D+P TI L LPGVGPKM +L + AW
Sbjct: 183 QLDALIYSVGFHKKKSGYIKRMAQMLLDEFEQDVPTTITGLSSLPGVGPKMGYLALQKAW 242
Query: 249 GIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV- 307
GI+ GIG VDVHV R+ W
Sbjct: 243 GIIGGIG-----------------------------------VDVHVDRLCKMWKWVDPN 267
Query: 308 -FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
KTPE TRK LESWLP LW+E+N +LVGFGQ IC ++ C+ CL +C +L
Sbjct: 268 KCKTPEHTRKALESWLPHELWNEINPVLVGFGQVICPARGKRCDLCLANKVCKSANHKLV 327
Query: 367 E 367
+
Sbjct: 328 K 328
>gi|365989664|ref|XP_003671662.1| hypothetical protein NDAI_0H02450 [Naumovozyma dairenensis CBS 421]
gi|343770435|emb|CCD26419.1| hypothetical protein NDAI_0H02450 [Naumovozyma dairenensis CBS 421]
Length = 467
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 153/316 (48%), Gaps = 67/316 (21%)
Query: 54 LDDKEHNDNKTQNKKNTL-YKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWE---PAH 109
LDD + KT N K+ + S K G NV N+ +P +D K P +
Sbjct: 60 LDDVDTEWVKTLNNKDYFEWLSTKTG--------NVPNRWSVPLPSDAFINKTGNPIPLN 111
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANV----------DIAPEVRRYHVLISLMLSSQ 159
+K + + +R MR PVD +G +I P+ RY VL S+MLS+Q
Sbjct: 112 FKPIYSFLRSMRSKVITPVDLVGGSSIPMTIGRKCGIPFNEIEPKNYRYQVLTSVMLSAQ 171
Query: 160 TKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
TKDEV AM + + GLT+E I EDV+ +LI VGF KA IKM+
Sbjct: 172 TKDEVTAKAMYNIMRYCIDELGIPQGLTLEGILQMDEDVIDELIKSVGFHTRKAHFIKMS 231
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
+++++ N+ +D+P I L LPGVGPKMA+L + AWG + GI
Sbjct: 232 AEMIRTNFQSDVPTNIPDLLSLPGVGPKMAYLTLQKAWGKMEGI---------------- 275
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSE 329
CVDVHVHR+ W K PE TRKEL+SWLP LW E
Sbjct: 276 -------------------CVDVHVHRLCKLFKWVDPNSKNPEQTRKELQSWLPPILWRE 316
Query: 330 VNHLLVGFGQQICKSQ 345
+N LLVG+GQ I +S+
Sbjct: 317 INSLLVGYGQIIDRSR 332
>gi|346970075|gb|EGY13527.1| DNA base excision repair N-glycosylase [Verticillium dahliae
VdLs.17]
Length = 286
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 134/260 (51%), Gaps = 53/260 (20%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH--------- 175
DA VD MG + + + RR+ +LISLM+SSQTKD VN AMGRL +
Sbjct: 9 DAAVDTMGCERLFSPTASDRDRRFQILISLMMSSQTKDTVNAVAMGRLHDELPPHEAGAP 68
Query: 176 -GLTIENICNTSEDVLGKLIIPVGFW--KTKAKHIKMASDILKKNYNNDIPNTIELLCKL 232
GL +ENI L +LI VGF KT + IK A+ +L+ N++ DIP TI+ L L
Sbjct: 69 PGLNLENILAVEPAKLNELIRVVGFHNNKTNPRFIKQAALLLRDNFDADIPPTIDGLTSL 128
Query: 233 PGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVD 292
PGVGPKMAHLC++ AWG GIG VD
Sbjct: 129 PGVGPKMAHLCLSAAWGRTEGIG-----------------------------------VD 153
Query: 293 VHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ--RPSCE 350
VHVHRI++ GW K +PE +R LE+WLP W E+N LLVG GQ +C Q R C
Sbjct: 154 VHVHRITNMWGWHKT-ASPEASRLALEAWLPRDRWHEINTLLVGLGQTVCPPQAGRRRCG 212
Query: 351 TCLNKDLCPQGKKELAERVK 370
C DL +G A+R K
Sbjct: 213 EC---DLGLRGLCRGADRKK 229
>gi|392573095|gb|EIW66237.1| hypothetical protein TREMEDRAFT_23302, partial [Tremella
mesenterica DSM 1558]
Length = 237
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 136/263 (51%), Gaps = 45/263 (17%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH-SANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P WKE + I+ MR+ APVD M + S N P+ R+H+LISLMLSSQTKD V
Sbjct: 9 PPKWKEQYDLIKRMREGIVAPVDEMPCERTSINGAADPKTLRFHILISLMLSSQTKDPVT 68
Query: 166 HAAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKK---NYN 219
A+ L GLT + + S D + + I VGFW+ K ++I+ A+ L + +
Sbjct: 69 AQAVSNLHSTLPGGLTPAALDSASPDTVSQCINKVGFWRRKTEYIQAAAKRLMEFPGDEK 128
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
D+P T+E LC+L GVGPKMA LC+ AW I GIG
Sbjct: 129 GDVPKTLEGLCELKGVGPKMAFLCLQAAWDINAGIG------------------------ 164
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VDVHVHRI++RL W K TPE TR L+SWLP +N +LVGFG
Sbjct: 165 -----------VDVHVHRITNRLRWHKPQTTTPEQTRLNLQSWLPMEYHRPINPMLVGFG 213
Query: 339 QQICKSQRPSCETCL--NKDLCP 359
Q IC P C+ CL + LCP
Sbjct: 214 QIICLPVGPRCDICLLAKEKLCP 236
>gi|224093156|ref|XP_002309812.1| predicted protein [Populus trichocarpa]
gi|222852715|gb|EEE90262.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 143/303 (47%), Gaps = 62/303 (20%)
Query: 78 GKRTLLKKQNVHNKDPIPDE--NDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDH 135
G + K ++ N P+ E + + P +W +VL I +MR DAPVD MG +
Sbjct: 103 GPALIRKLKSTENVLPVDSEAASTIRPAGEPPLNWDKVLEGIHKMRSSEDAPVDTMGCEK 162
Query: 136 SANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL-TIENICNTSEDVLGKLI 194
A + + P V +LS+ A+ RL+++ L T + I E + LI
Sbjct: 163 -AGISLPPGV---------VLSA--------GAIQRLQQNNLLTADAIDKADETAIKDLI 204
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
PVGF+ KA ++K + I Y+ DIP+++E L LPG+GPKMAHL MN AW V GI
Sbjct: 205 YPVGFYTRKASNLKKIAKICLLKYDGDIPSSLEDLLSLPGIGPKMAHLVMNIAWNNVQGI 264
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT------KVF 308
CVD HVHRI +RLGW +
Sbjct: 265 -----------------------------------CVDTHVHRICNRLGWVARPGTKQKT 289
Query: 309 KTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
TPE+TR+ L+ WLP+ W +N LLVGFGQ IC RP C C + CP KE +
Sbjct: 290 STPEETREALQLWLPKDEWVPINPLLVGFGQTICTPLRPRCGMCCISEFCPSAFKETSSP 349
Query: 369 VKK 371
K
Sbjct: 350 ASK 352
>gi|45185964|ref|NP_983680.1| ACR278Wp [Ashbya gossypii ATCC 10895]
gi|44981754|gb|AAS51504.1| ACR278Wp [Ashbya gossypii ATCC 10895]
Length = 367
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 139/288 (48%), Gaps = 56/288 (19%)
Query: 92 DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMG-------WDHSANV---DI 141
D +P + + P ++ + + +R MR PVD +G + + I
Sbjct: 64 DLLPVDRKLEDNNRFPPNFVGIYSKVRLMRSKIITPVDTVGCASLPLTLNEKYGILKDQI 123
Query: 142 APEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGK 192
P R +L++LMLS+QTKDE N AM L ++ G+T+E + E L
Sbjct: 124 KPLHYRLQLLVALMLSAQTKDETNAIAMNNLMDYCMNNIGIKEGITLEALLQIEEKQLDT 183
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
LI PVGF + KA +IK A +L++ + D+P TIE LPGVG K+ L + +WGIV
Sbjct: 184 LIHPVGFHRKKAAYIKRAMPMLQEEFGGDVPTTIEGFNSLPGVGNKIGFLALQKSWGIVA 243
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKT 310
GIG VDVHV R+S W K KT
Sbjct: 244 GIG-----------------------------------VDVHVDRLSKMWRWVDAKKCKT 268
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
PE TRK LE W+P LW+E+N LLVGFGQ IC S+ C+ CL D+C
Sbjct: 269 PEHTRKALEEWVPRELWNEINPLLVGFGQVICPSRGKRCDLCLANDIC 316
>gi|374106887|gb|AEY95796.1| FACR278Wp [Ashbya gossypii FDAG1]
Length = 367
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 139/288 (48%), Gaps = 56/288 (19%)
Query: 92 DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMG-------WDHSANV---DI 141
D +P + + P ++ + + +R MR PVD +G + + I
Sbjct: 64 DLLPVDRKLEDNNRFPPNFVGIYSKVRLMRSKIITPVDTVGCASLPLTLNEKYGILKDQI 123
Query: 142 APEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGK 192
P R +L++LMLS+QTKDE N AM L ++ G+T+E + E L
Sbjct: 124 KPLHYRLQLLVALMLSAQTKDETNAIAMNNLMDYCMNNIGIKEGITLEALLQIEEKQLDM 183
Query: 193 LIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVT 252
LI PVGF + KA +IK A +L++ + D+P TIE LPGVG K+ L + +WGIV
Sbjct: 184 LIHPVGFHRKKAAYIKRAMPMLQEEFGGDVPTTIEGFNSLPGVGNKIGFLALQKSWGIVA 243
Query: 253 GIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKT 310
GIG VDVHV R+S W K KT
Sbjct: 244 GIG-----------------------------------VDVHVDRLSKMWRWVDAKKCKT 268
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
PE TRK LE W+P LW+E+N LLVGFGQ IC S+ C+ CL D+C
Sbjct: 269 PEHTRKALEEWVPRELWNEINPLLVGFGQVICPSRGKRCDLCLANDIC 316
>gi|83771969|dbj|BAE62099.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 269
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 125/259 (48%), Gaps = 68/259 (26%)
Query: 126 APVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL------------- 172
APVD MG +P RR+ L++LMLSSQTKD V AM RL
Sbjct: 8 APVDTMGCAELYWRASSPRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIE 67
Query: 173 -------------------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
++ L +ENI S + L +LI VGF K K+IK A+ I
Sbjct: 68 TSMIKEEPDEDTFKLEKPLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAII 127
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
L+ Y +DIP+T E L KLPGVG KMA+LCM+ AWG GIG
Sbjct: 128 LRDQYQSDIPSTAEELMKLPGVGLKMAYLCMSAAWGKHEGIG------------------ 169
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHRI++ GW K KTPEDTRK LESWLP+ W E+N L
Sbjct: 170 -----------------VDVHVHRITNLWGWNKT-KTPEDTRKALESWLPKDKWHEINKL 211
Query: 334 LVGFGQQICKSQRPSCETC 352
LVG GQ +C C C
Sbjct: 212 LVGLGQTVCLPVGRKCGDC 230
>gi|344234608|gb|EGV66476.1| DNA glycosylase [Candida tenuis ATCC 10573]
Length = 245
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 128/250 (51%), Gaps = 51/250 (20%)
Query: 143 PEVRRYHVLISLMLSSQTKDEVNHAAMGRLK--------EHGLTIENICNTSEDVLGKLI 194
P R+ +LISLMLSSQTKDEV AM +L + GL++E++ S+ L I
Sbjct: 19 PRTFRFQLLISLMLSSQTKDEVLDDAMRKLNNGLKSRGFQQGLSLESVMTLSDKELDGYI 78
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
VGF K +IK A +L++ + DIPNTIE + KLPGVGPKM +L + W I TGI
Sbjct: 79 GKVGFHNRKTVYIKNACIMLQEQFGGDIPNTIEQIVKLPGVGPKMGYLLLQRGWNISTGI 138
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
G VDVH+HR++ GW+K P+ T
Sbjct: 139 G-----------------------------------VDVHLHRLAMMWGWSKKTTNPDMT 163
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELA------ 366
RK LE WLP W+E+N LLVGFGQ IC Q +C+ C K LC ++L
Sbjct: 164 RKYLEEWLPRKFWAEINPLLVGFGQVICTPQFQNCDVCSLATKSLCKSVNRKLVNKGLTE 223
Query: 367 ERVKKSPKKR 376
ER++K K R
Sbjct: 224 ERLEKLKKGR 233
>gi|126652805|ref|XP_001388380.1| endonuclease III [Cryptosporidium parvum Iowa II]
gi|126117473|gb|EAZ51573.1| endonuclease III, putative [Cryptosporidium parvum Iowa II]
Length = 189
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 119/217 (54%), Gaps = 36/217 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R+HVL++ LSSQTKDEV A M RL ++GL+ E I N S D L ++ VGF+ TKAK+
Sbjct: 1 RFHVLVAAFLSSQTKDEVTAACMNRLIDNGLSPEFINNQSVDSLRDMLYGVGFYNTKAKN 60
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K S I+ +NY+ +P E L LPG+GPKMA+L + +GIV GI
Sbjct: 61 LKEISRIIIQNYSGKVPEKYEQLVMLPGIGPKMANLILQIGFGIVVGIS----------- 109
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD H+HRI +R+GW K K P +T KE+E LP
Sbjct: 110 ------------------------VDTHMHRIFNRIGWVKT-KNPIETSKEMEKMLPRIY 144
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W+++N + VG+GQ ICK P C+ C +D C G K
Sbjct: 145 WNDINKVFVGYGQTICKPINPKCQECNIRDYCSHGMK 181
>gi|58269828|ref|XP_572070.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113763|ref|XP_774466.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257104|gb|EAL19819.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228306|gb|AAW44763.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 452
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 147/283 (51%), Gaps = 53/283 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHS-ANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
PA W+E I +MR+ APVD MG + N + P+ R+H+LISLMLSSQTKD V
Sbjct: 118 PAKWEEQYRLIEKMRRGIVAPVDDMGCERPRTNTEGDPKTFRFHILISLMLSSQTKDAVT 177
Query: 166 HAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL---KKNYN 219
AA+ L GL+ ++ + + + I VGFW+ KA++I+ A+ L + +
Sbjct: 178 SAAVTSLHTSLPGGLSAASLAAAPLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEK 237
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
D+P T+E LCKL GVGPKMA L + AW I GIG
Sbjct: 238 GDVPKTVEGLCKLKGVGPKMAFLALQCAWDINAGIG------------------------ 273
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFG 338
VDVHVHRI++RL W + TPE TR L+SWLP L +N L+VGFG
Sbjct: 274 -----------VDVHVHRITNRLKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLMVGFG 322
Query: 339 QQICKSQRPSCETCL--NKDLCP--------QGKKELAERVKK 371
Q IC P C+ CL K++CP +G+KE+ K+
Sbjct: 323 QVICLPVGPRCDICLLGQKEICPSRVKGANAKGRKEVTYSFKE 365
>gi|348684342|gb|EGZ24157.1| hypothetical protein PHYSODRAFT_478985 [Phytophthora sojae]
Length = 278
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 130/243 (53%), Gaps = 42/243 (17%)
Query: 127 PVDAMGWDHSANVDIA-PEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE-----HGLTIE 180
P+D G ++ +V R+ +L++ +LSSQT+D + +AAM RL + GLTIE
Sbjct: 56 PIDEFGTHACVAEGVSCAKVERFQLLVAALLSSQTQDPITYAAMQRLHQLGENVEGLTIE 115
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
+ TSE+ L +++ PVGF+ KA+ +K + IL+ ++ DIP +++ L +LPG+GPK+
Sbjct: 116 TLLATSEEELSEVLKPVGFYHRKAQQLKRVAAILRTQFHGDIPRSLDELQQLPGIGPKIG 175
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
+ AWG V GI VD HVHR++
Sbjct: 176 RVITLLAWGHVDGI-----------------------------------VVDTHVHRLAQ 200
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
RLGW TPEDTR+ELE W+P W +++ +VGFGQ +C ++ PSC +C CP
Sbjct: 201 RLGWAST-STPEDTRRELEDWIPREHWGKLSLAVVGFGQTVCTAKHPSCSSCPLAPKCPS 259
Query: 361 GKK 363
K
Sbjct: 260 AFK 262
>gi|323307092|gb|EGA60375.1| Ntg2p [Saccharomyces cerevisiae FostersO]
Length = 380
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 134/287 (46%), Gaps = 60/287 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH------------SANVDIAPEVRRYHVLISL 154
P + + N +R MR PVDAMG S VD P+ R LI
Sbjct: 98 PESFLPIYNRVRLMRSKVKTPVDAMGCSMIPVLVSNKCGIPSEKVD--PKNFRLQFLIGT 155
Query: 155 MLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLS+QT+DE A + E+ G+T++ + E VL LI V F+ KA
Sbjct: 156 MLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSFYTRKAN 215
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK + +L N+++DIP IE + LPGVGPKM +L + WG++ GI
Sbjct: 216 FIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIXGI----------- 264
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLP 323
CVDVHVHR+ W KT E TRKEL+ WLP
Sbjct: 265 ------------------------CVDVHVHRLCKMXNWVDPIKCKTAEHTRKELQVWLP 300
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
SLW E+N +LVGFGQ IC ++ C+ CL D+C ++L E K
Sbjct: 301 HSLWYEINTVLVGFGQLICMARGKRCDLCLANDVCNARNEKLIESSK 347
>gi|118395856|ref|XP_001030273.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila]
gi|89284570|gb|EAR82610.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila SB210]
Length = 371
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 132/257 (51%), Gaps = 36/257 (14%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
+++E+ + I+ R APVD +G D + + R + L++++LS QTKDE
Sbjct: 145 NYEEIYSLIKGYRDTHTAPVDTLGCDLQGDESLPTNDRNFQKLMAIILSVQTKDETTDLV 204
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M ++ + +TI+ L ++I V F K ++IK A++++K YN IP+ E
Sbjct: 205 MKKVVKEKITIDKAVEIPSSELKEIIKQVNFNGKKVEYIKNAAEVIKNTYNYVIPDQYED 264
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L K+ G+GPK+A+L + A+ GI
Sbjct: 265 LIKIKGIGPKVANLFLQCAYNKTVGIA--------------------------------- 291
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
VD HVHRIS+RL W KTPE TR ELE L + W +VN+LLVG+GQ +CK Q P
Sbjct: 292 --VDTHVHRISNRLEWVST-KTPEQTRIELEKLLDKKYWEDVNNLLVGYGQSVCKPQNPQ 348
Query: 349 CETCLNKDLCPQGKKEL 365
C+ C KD CP+G++ L
Sbjct: 349 CQICPVKDKCPEGRRRL 365
>gi|6324530|ref|NP_014599.1| bifunctional N-glycosylase/AP lyase NTG2 [Saccharomyces cerevisiae
S288c]
gi|14285602|sp|Q08214.1|NTG2_YEAST RecName: Full=DNA base excision repair N-glycosylase 2
gi|1419843|emb|CAA99045.1| endonuclease III-like glycosylase 2 [Saccharomyces cerevisiae]
gi|151945590|gb|EDN63831.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae YJM789]
gi|285814846|tpg|DAA10739.1| TPA: bifunctional N-glycosylase/AP lyase NTG2 [Saccharomyces
cerevisiae S288c]
gi|323303033|gb|EGA56836.1| Ntg2p [Saccharomyces cerevisiae FostersB]
gi|349581125|dbj|GAA26283.1| K7_Ntg2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296288|gb|EIW07390.1| Ntg2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 380
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 134/287 (46%), Gaps = 60/287 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH------------SANVDIAPEVRRYHVLISL 154
P + + N +R MR PVDAMG S VD P+ R LI
Sbjct: 98 PESFLPIYNRVRLMRSKVKTPVDAMGCSMIPVLVSNKCGIPSEKVD--PKNFRLQFLIGT 155
Query: 155 MLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLS+QT+DE A + E+ G+T++ + E VL LI V F+ KA
Sbjct: 156 MLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSFYTRKAN 215
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK + +L N+++DIP IE + LPGVGPKM +L + WG++ GI
Sbjct: 216 FIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIAGI----------- 264
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLP 323
CVDVHVHR+ W KT E TRKEL+ WLP
Sbjct: 265 ------------------------CVDVHVHRLCKMWNWVDPIKCKTAEHTRKELQVWLP 300
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
SLW E+N +LVGFGQ IC ++ C+ CL D+C ++L E K
Sbjct: 301 HSLWYEINTVLVGFGQLICMARGKRCDLCLANDVCNARNEKLIESSK 347
>gi|190407301|gb|EDV10568.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae RM11-1a]
gi|207341351|gb|EDZ69433.1| YOL043Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273941|gb|EEU08860.1| Ntg2p [Saccharomyces cerevisiae JAY291]
gi|259149442|emb|CAY86246.1| Ntg2p [Saccharomyces cerevisiae EC1118]
gi|323346595|gb|EGA80881.1| Ntg2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352347|gb|EGA84882.1| Ntg2p [Saccharomyces cerevisiae VL3]
gi|365763207|gb|EHN04737.1| Ntg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 134/287 (46%), Gaps = 60/287 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH------------SANVDIAPEVRRYHVLISL 154
P + + N +R MR PVDAMG S VD P+ R LI
Sbjct: 98 PESFLPIYNRVRLMRSKVKTPVDAMGCSMIPVLVSNKCGIPSEKVD--PKNFRLQFLIGT 155
Query: 155 MLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLS+QT+DE A + E+ G+T++ + E VL LI V F+ KA
Sbjct: 156 MLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSFYTRKAN 215
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK + +L N+++DIP IE + LPGVGPKM +L + WG++ GI
Sbjct: 216 FIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVGI----------- 264
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLP 323
CVDVHVHR+ W KT E TRKEL+ WLP
Sbjct: 265 ------------------------CVDVHVHRLCKMWNWVDPIKCKTAEHTRKELQVWLP 300
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
SLW E+N +LVGFGQ IC ++ C+ CL D+C ++L E K
Sbjct: 301 HSLWYEINTVLVGFGQLICMARGKRCDLCLANDVCNARNEKLIESSK 347
>gi|323335667|gb|EGA76950.1| Ntg2p [Saccharomyces cerevisiae Vin13]
Length = 292
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 134/287 (46%), Gaps = 60/287 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH------------SANVDIAPEVRRYHVLISL 154
P + + N +R MR PVDAMG S VD P+ R LI
Sbjct: 10 PESFLPIYNRVRLMRSKVKTPVDAMGCSMIPVLVSNKCGIPSEKVD--PKNFRLQFLIGT 67
Query: 155 MLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLS+QT+DE A + E+ G+T++ + E VL LI V F+ KA
Sbjct: 68 MLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSFYTRKAN 127
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK + +L N+++DIP IE + LPGVGPKM +L + WG++ GI
Sbjct: 128 FIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVGI----------- 176
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLP 323
CVDVHVHR+ W KT E TRKEL+ WLP
Sbjct: 177 ------------------------CVDVHVHRLCKMWNWVDPIKCKTAEHTRKELQVWLP 212
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
SLW E+N +LVGFGQ IC ++ C+ CL D+C ++L E K
Sbjct: 213 HSLWYEINTVLVGFGQLICMARGKRCDLCLANDVCNARNEKLIESSK 259
>gi|401623702|gb|EJS41791.1| ntg2p [Saccharomyces arboricola H-6]
Length = 381
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 131/273 (47%), Gaps = 56/273 (20%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSA----------NVDIAPEVRRYHVLISLML 156
PA + + N +R MR PVDAMG N + P+ R LI ML
Sbjct: 99 PATFLPIYNRVRLMRSKVSTPVDAMGCSMIPVLVSNKCGIPNEKVNPKNFRLQFLIGTML 158
Query: 157 SSQTKDE-VNHAAM---GRLKE-----HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
S+QT+DE + AA+ G E G+T++ + E L LI V F+ KA I
Sbjct: 159 SAQTRDERMAQAALNITGYCLETLKIPEGITLDGLLKIEESKLADLIRCVSFYTRKASFI 218
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + +L N+++DIP IE L LPGVGPKM +L + WG++ GI
Sbjct: 219 KRTAQLLVANFDSDIPYDIEGLLSLPGVGPKMGYLTLQKGWGLIAGI------------- 265
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLPES 325
CVDVHVHR+ W KT E TRKEL++WLP S
Sbjct: 266 ----------------------CVDVHVHRLCSMWNWVDAVKCKTAEHTRKELQTWLPHS 303
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
LW E+N +LVGFGQ IC ++ C+ CL ++C
Sbjct: 304 LWYEINTVLVGFGQLICMARSKRCDLCLVNNIC 336
>gi|258573229|ref|XP_002540796.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901062|gb|EEP75463.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 655
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 136/276 (49%), Gaps = 68/276 (24%)
Query: 109 HWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHA 167
+W+E+ + I++MR K+ APVD MG + + RR+H+L++LMLSSQTKD V
Sbjct: 380 NWEEMYSLIKDMRLKNPTAPVDTMGCAELYWRNSTEQERRFHILVALMLSSQTKDTVTAV 439
Query: 168 AMGRL-----KEH--------------------------GLTIENICNTSEDVLGKLIIP 196
AM RL EH LTI NI L +LI
Sbjct: 440 AMHRLHTELGPEHDDRDANTPDTKAVAQWDTSTHSTARSTLTIANILRVPAPRLNQLIHS 499
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
VGF K K+++ + +L+ ++++DIP T L LPGVGPKMA+LCM+ AWG+ GIG
Sbjct: 500 VGFHNLKTKYLQTTASLLQAHHDSDIPRTAADLMSLPGVGPKMAYLCMSSAWGVDDGIG- 558
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK 316
VDVHVHRI++ GW + KTPE+TR
Sbjct: 559 ----------------------------------VDVHVHRITNLWGWVRT-KTPEETRV 583
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
LE+WLP W E+N LLVG GQ +C C C
Sbjct: 584 VLEAWLPRDKWREINWLLVGLGQTVCLPVGRRCGEC 619
>gi|323456037|gb|EGB11904.1| hypothetical protein AURANDRAFT_14212, partial [Aureococcus
anophagefferens]
Length = 218
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 130/246 (52%), Gaps = 46/246 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P W+ + +R +R A VD+MG + A+ D + E RRYH L+SLMLSSQTKD VN
Sbjct: 4 PPGWRRTWDCVRALRADRTAVVDSMGCEKLADPDASDEDRRYHTLVSLMLSSQTKDTVNA 63
Query: 167 AAMGRLKEHGLTIENIC-NTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
A M +L GL++ +I + ED ++I VGF K K I+ A+ L++++ +P T
Sbjct: 64 ATMAKLVARGLSVSSILDDVPEDEFHEMIKGVGFHNVKTKTIRAATLKLREDHGGAVPGT 123
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ L LPGVGPKMA L + A+G+ G+
Sbjct: 124 MDDLLALPGVGPKMALLVLKCAFGVTAGV------------------------------- 152
Query: 286 IPQLCVDVHVHRISHRLGWTK----------VFKTPEDTRKELESWLPESLWSEVNHLLV 335
VD HVHRI ++LGWT K PE TR+ +ESW+P ++W +VN LLV
Sbjct: 153 ----SVDTHVHRICNQLGWTGGAPTTDKANFATKDPEKTRRAVESWMPRAIWGDVNWLLV 208
Query: 336 GFGQQI 341
G GQ++
Sbjct: 209 GLGQEV 214
>gi|254573634|ref|XP_002493926.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Komagataella pastoris GS115]
gi|238033725|emb|CAY71747.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Komagataella pastoris GS115]
Length = 359
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 136/266 (51%), Gaps = 51/266 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPE----VRRYHVLISLMLSSQTKD 162
P ++ + N ++ +R PVD+MG + + IA E + RY +L+SLMLSSQTKD
Sbjct: 87 PKNFFPIYNEVKLIRSKITTPVDSMGC-ATIPIRIAEEKSGPLFRYRLLVSLMLSSQTKD 145
Query: 163 EVNHAAMGRLK--------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL 214
EVN+ M + E+GL ++ I + L +LI +GF K ++K A+ I+
Sbjct: 146 EVNYEVMKSMNDYFKSVGYENGLCLQAILDVEPTKLDELIHKIGFHNRKTVYLKSAAVIV 205
Query: 215 KKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRS 274
K+ +N DIP I+ + LPGVGPKM +L + AWGI GIG
Sbjct: 206 KEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIG------------------- 246
Query: 275 ELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLL 334
VDVHV R+++ W KTPE TR LE W+P LW E+N +L
Sbjct: 247 ----------------VDVHVDRLANMWKWVNT-KTPEQTRLALEKWVPRELWQEINPVL 289
Query: 335 VGFGQQICKSQRPSCETC--LNKDLC 358
VGFGQ IC + C+ C +K LC
Sbjct: 290 VGFGQVICTPRGRRCDVCSLASKKLC 315
>gi|328860800|gb|EGG09905.1| hypothetical protein MELLADRAFT_26899 [Melampsora larici-populina
98AG31]
Length = 228
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 139/266 (52%), Gaps = 53/266 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSA----NVDIAP-EV-RRYHVLISLMLSSQT 160
P W+E N I+ R+ APVD MG D + N D+ P EV RR L+SLMLSSQT
Sbjct: 2 PKRWEETYNLIKTQRESLIAPVDTMGCDQAGFDPLNPDLKPTEVERRLSCLVSLMLSSQT 61
Query: 161 KDEVNHAAMGRLK---EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKN 217
KD++ H A+ LK +GL++ ++ N+S + I VGFW+ KA ++K ++ L
Sbjct: 62 KDQITHQAVLNLKRNLSNGLSVNSLRNSSLLQIENCINKVGFWRRKASYLKEMAEDLYSF 121
Query: 218 YNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELI 277
+ +D+P T+ VGPKMA L + AW I GIG
Sbjct: 122 HQSDVPKTLG-----KRVGPKMAFLALASAWSINEGIG---------------------- 154
Query: 278 CVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT-PEDTRKELESWLPESLWSEVNHLLVG 336
VD HVHRI++RLGW T PE TR L+SWLP++L E+NHLLVG
Sbjct: 155 -------------VDTHVHRITNRLGWHLPPTTEPEQTRLNLQSWLPKNLHQEINHLLVG 201
Query: 337 FGQQICKSQRPSCETCLN---KDLCP 359
FGQ IC P CETC + LCP
Sbjct: 202 FGQLICLPIGPKCETCFVGQIEGLCP 227
>gi|209879798|ref|XP_002141339.1| HhH-GDP family base excision DNA repair protein [Cryptosporidium
muris RN66]
gi|209556945|gb|EEA06990.1| HhH-GDP family base excision DNA repair protein, putative
[Cryptosporidium muris RN66]
Length = 199
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 118/216 (54%), Gaps = 36/216 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+H+L+S +LSSQTKDE A M RLK+HGLT + IC S D L K++ VGF KAK++
Sbjct: 8 FHILVSTLLSSQTKDESTAACMNRLKKHGLTPQIICEMSIDSLTKILYGVGFHNNKAKYL 67
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S I+ ++Y+ +P+ E L LPG+GPKMA+L + A+ V GI
Sbjct: 68 KEVSKIIIESYSGKVPDKYEQLISLPGIGPKMANLVLQTAFNKVNGIS------------ 115
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD H+HRI +R+GW K K+P +T+ +E LP S W
Sbjct: 116 -----------------------VDTHMHRIFNRIGWVKT-KSPNETKYHMEKRLPHSYW 151
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
VN + VGFGQ IC+ P C C+ + LC G++
Sbjct: 152 RLVNKVFVGFGQIICRPVNPKCSECVIRALCSHGRR 187
>gi|366994462|ref|XP_003676995.1| hypothetical protein NCAS_0F01560 [Naumovozyma castellii CBS 4309]
gi|342302863|emb|CCC70640.1| hypothetical protein NCAS_0F01560 [Naumovozyma castellii CBS 4309]
Length = 446
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 152/324 (46%), Gaps = 69/324 (21%)
Query: 47 NIALNNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIP-----DENDTK 101
++ N DD + + KT N K+ E L RT NV N+ +P EN+T
Sbjct: 55 SVITNTFQDDVDTDWVKTLNNKDYF---EWLATRT----GNVPNRWSVPLPGNAFENNTG 107
Query: 102 KTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANV----------DIAPEVRRYHVL 151
K P ++K++ +R MR PVD +G I P+ RY VL
Sbjct: 108 KPI--PKNFKKIYMRLRNMRSTIITPVDLIGGSSIPMTIGQKCGIPKDKIEPKNYRYQVL 165
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKT 202
S+MLS+QTKDEV + + + GLT+E I E+ L +LI VGF
Sbjct: 166 TSVMLSAQTKDEVTARGVENIMRYCIEELNISQGLTLEGILQIDEETLDQLIKQVGFHTR 225
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
KAK IK + +L N+ +D+P I L LPGVGPKMA+L + AWG + GI
Sbjct: 226 KAKFIKQTAQMLVDNFQSDVPTDIPGLLSLPGVGPKMAYLTLQKAWGRMAGI-------- 277
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESW 321
CVDVHVHR W K PE+TRKELESW
Sbjct: 278 ---------------------------CVDVHVHRFCRLFKWVNPKSKNPEETRKELESW 310
Query: 322 LPESLWSEVNHLLVGFGQQICKSQ 345
LP LW E+N LLVG+GQ I +++
Sbjct: 311 LPHPLWREINSLLVGYGQIIDRAR 334
>gi|328354254|emb|CCA40651.1| endonuclease III [Komagataella pastoris CBS 7435]
Length = 731
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 136/266 (51%), Gaps = 51/266 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPE----VRRYHVLISLMLSSQTKD 162
P ++ + N ++ +R PVD+MG + + IA E + RY +L+SLMLSSQTKD
Sbjct: 459 PKNFFPIYNEVKLIRSKITTPVDSMGC-ATIPIRIAEEKSGPLFRYRLLVSLMLSSQTKD 517
Query: 163 EVNHAAMGRLK--------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDIL 214
EVN+ M + E+GL ++ I + L +LI +GF K ++K A+ I+
Sbjct: 518 EVNYEVMKSMNDYFKSVGYENGLCLQAILDVEPTKLDELIHKIGFHNRKTVYLKSAAVIV 577
Query: 215 KKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRS 274
K+ +N DIP I+ + LPGVGPKM +L + AWGI GIG
Sbjct: 578 KEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIG------------------- 618
Query: 275 ELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLL 334
VDVHV R+++ W KTPE TR LE W+P LW E+N +L
Sbjct: 619 ----------------VDVHVDRLANMWKWVNT-KTPEQTRLALEKWVPRELWQEINPVL 661
Query: 335 VGFGQQICKSQRPSCETC--LNKDLC 358
VGFGQ IC + C+ C +K LC
Sbjct: 662 VGFGQVICTPRGRRCDVCSLASKKLC 687
>gi|402584089|gb|EJW78031.1| hypothetical protein WUBG_11058, partial [Wuchereria bancrofti]
Length = 230
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 96 DENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLM 155
+E+++ +TK P W + L NI++MR DAPVD+MG A+ P++ R+ L+SLM
Sbjct: 72 NEHESARTKESPL-WMKHLENIKQMRSKWDAPVDSMGCHMLADALAEPKIFRFQTLLSLM 130
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
LSSQTKD + AAM RL+EHG T++++ + L +L+IPVGF+K KA +IK ++ILK
Sbjct: 131 LSSQTKDHITAAAMHRLREHGCTVDDLVVIPTEKLQQLLIPVGFYKKKAVYIKKVAEILK 190
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
+ Y+ DIPNT+E LC LPGVG KMA+L M AW + G+G
Sbjct: 191 ERYDGDIPNTVEGLCSLPGVGEKMAYLAMCTAWDQLEGLG 230
>gi|50287173|ref|XP_446016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525323|emb|CAG58940.1| unnamed protein product [Candida glabrata]
Length = 392
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 140/285 (49%), Gaps = 56/285 (19%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANV----------DIAPEVRRYHVLISLML 156
P + + N +R MR PVD +G I P+ R+ +LI++ML
Sbjct: 100 PKSFIPIYNRVRLMRAQLKTPVDKVGCALMPIFIAENCGLHKEQILPKNYRFQLLIAVML 159
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
SSQTKDE+ AM + + G+T+E++ E ++ + I VGF + KA +I
Sbjct: 160 SSQTKDEITAEAMLNIMRYCLNELHDPNGMTLESVLMMDESIIDEKIKSVGFHRRKATYI 219
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L+ N+++D+P + + LPGVGPKM +L + AWG + GI
Sbjct: 220 YKSVRMLRDNFDSDVPTNVNDMLSLPGVGPKMTYLALQRAWGKMDGI------------- 266
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPES 325
CVDVHV R+ W K KTP+ TRK L++WLP+
Sbjct: 267 ----------------------CVDVHVDRLCKMWRWVDAKKCKTPDHTRKALQTWLPKC 304
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
LW E+N +LVGFGQ IC ++ C+ CL D+C ++L +++
Sbjct: 305 LWYEINTVLVGFGQVICMARGKRCDICLANDICNARDRKLLSKLQ 349
>gi|259483988|tpe|CBF79828.1| TPA: DNA repair protein Ntg1, putative (AFU_orthologue;
AFUA_2G01120) [Aspergillus nidulans FGSC A4]
Length = 429
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 136/292 (46%), Gaps = 89/292 (30%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W + + +++MR+ APVD MG +P RR+ LI+LMLSSQTKD V
Sbjct: 138 PSNWDAIYSIVKKMREDNPTAPVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVT 197
Query: 166 HAAMGRL---------------KEHG---------------------------------L 177
AM RL EH L
Sbjct: 198 AVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENGEPAIKQEAKDGVPPANPSHDSTL 257
Query: 178 TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGP 237
+ENI S + L LI VGF K K+IK A++I++ YN+DIP+T L KLPGVGP
Sbjct: 258 NLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEIIRDQYNSDIPSTPAELMKLPGVGP 317
Query: 238 KMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHR 297
KMA+LCM+ AWG GIG VDVHVHR
Sbjct: 318 KMAYLCMSAAWGKHEGIG-----------------------------------VDVHVHR 342
Query: 298 ISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVG----FGQQICKSQ 345
I++ GW K KTPE+TR LESWLP+ W E+N L G G ++CKS+
Sbjct: 343 ITNLWGWHKT-KTPEETRMSLESWLPKDKWHEINKLRCGDCGLAGTKLCKSE 393
>gi|301122869|ref|XP_002909161.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
gi|262099923|gb|EEY57975.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
Length = 259
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 115/223 (51%), Gaps = 48/223 (21%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP+ WKE+L I +MR DA VD G + + +I P V R HVLIS MLSSQTKD VN
Sbjct: 64 EPSGWKEILRGIEQMRAKKDAEVDKYGCEVFFDENIPPHVCRLHVLISAMLSSQTKDPVN 123
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN----- 220
AAMGRL +HGLT++ + + L +LI PVGF+ KAK+IK IL K
Sbjct: 124 AAAMGRLIKHGLTVKTMLEIDQHDLAQLIRPVGFFNYKAKYIKQTVLILSKQAEAEGKDV 183
Query: 221 -DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
DIP+T E L LPGVGPKMA L MN AW GI
Sbjct: 184 VDIPSTYEELIALPGVGPKMATLVMNCAWKNTVGI------------------------- 218
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKVF-------KTPEDTR 315
CVD HVHRIS+RL W K + + PE TR
Sbjct: 219 ----------CVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTR 251
>gi|401827350|ref|XP_003887767.1| endonuclease III [Encephalitozoon hellem ATCC 50504]
gi|392998774|gb|AFM98786.1| endonuclease III [Encephalitozoon hellem ATCC 50504]
Length = 238
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 139/278 (50%), Gaps = 63/278 (22%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-----EVRRYHVLISLM 155
K +K E E+ I+ R+ +PVD MG IAP E RR+ +L+SL+
Sbjct: 3 KASKKEMERSLELYFEIKRQREGIVSPVDTMGCF------IAPSCHTEEERRFRILVSLL 56
Query: 156 LSSQTKDEVNHAAMGRLKE-------------HGLTIENICNTSEDVLGKLIIPVGFWKT 202
LSSQTKDEV H A RL+ +GLTIEN+ N+S + + + I VGF
Sbjct: 57 LSSQTKDEVTHEATERLRRFLPENTAADGDTHNGLTIENVINSSAEHINECIKRVGFHNR 116
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
KA+++K ++ILKK +P +E L LPGVG KMA L MNHA V GI
Sbjct: 117 KAENLKKIAEILKK---KGLPENMEDLTSLPGVGNKMAILYMNHACNKVVGIS------- 166
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VD HVHRIS+R+G K K E TRKELE +
Sbjct: 167 ----------------------------VDTHVHRISNRIGLVKT-KDVESTRKELEKIV 197
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
P+ W +N LVG+GQ IC ++RP C+ C + CP
Sbjct: 198 PKREWGSINRTLVGYGQTICVAKRPRCKECCIRGECPS 235
>gi|348675883|gb|EGZ15701.1| hypothetical protein PHYSODRAFT_561415 [Phytophthora sojae]
Length = 275
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 119/229 (51%), Gaps = 48/229 (20%)
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQ 159
T+ + EP+ W+E+L I EMR + DA VD G + + P V R+HVLI+ M+SSQ
Sbjct: 73 TRVPRQEPSGWREILKGIEEMRANKDAEVDKYGCEVFFDESFPPHVCRFHVLIAAMMSSQ 132
Query: 160 TKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
TKD VN AAMG L +HGLTIE++ + L +LI PVGF+ KAK+IK + IL K
Sbjct: 133 TKDPVNAAAMGCLIKHGLTIESMLEIDQQELAQLIRPVGFFNHKAKYIKQTAAILTKQAE 192
Query: 220 ------NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
DIP+T E L LPGVGPKMA L MN AW GI
Sbjct: 193 VEGKDVVDIPSTYEGLIALPGVGPKMATLVMNCAWNNTVGI------------------- 233
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF-------KTPEDTR 315
CVD HVHRIS+RL W K + + PE TR
Sbjct: 234 ----------------CVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTR 266
>gi|303390292|ref|XP_003073377.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
gi|303302523|gb|ADM12017.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
Length = 238
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 138/261 (52%), Gaps = 52/261 (19%)
Query: 112 EVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
E+ I++ R++ +PVD MG + + E RR+H+L+SL+LSSQTKDE+ + AM R
Sbjct: 15 ELYLEIKKQRENIVSPVDTMGCFVTPSYKTEEE-RRFHILVSLLLSSQTKDEITYEAMER 73
Query: 172 L------------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYN 219
L ++ GLT+EN+ ++S + I VGF KA+++K ++IL++
Sbjct: 74 LRTLLPEGGAADGRDCGLTMENVTSSSVGYIDSCIKRVGFHTKKAENLKRITEILRE--- 130
Query: 220 NDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICV 279
+P ++ L LPG+G KMA L MNHA G V GI
Sbjct: 131 KGLPEEMKDLVSLPGIGNKMAILYMNHACGSVVGIS------------------------ 166
Query: 280 RKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD HVHRIS+R+G K K E TR+ELE +P+ W +N +LVG+GQ
Sbjct: 167 -----------VDTHVHRISNRIGLVKT-KDAESTRRELEKIVPKREWETINRVLVGYGQ 214
Query: 340 QICKSQRPSCETCLNKDLCPQ 360
+C ++RP CE C + CP
Sbjct: 215 TVCVARRPKCEECCIRSKCPS 235
>gi|67901332|ref|XP_680922.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
gi|40742649|gb|EAA61839.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
Length = 969
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 139/300 (46%), Gaps = 89/300 (29%)
Query: 99 DTKKTKWEPAHWKEVLNNIREMRK-HGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLS 157
D T P++W + + +++MR+ + APVD MG +P RR+ LI+LMLS
Sbjct: 130 DGSFTVEAPSNWDAIYSIVKKMREDNPTAPVDTMGCAELYWRASSPRDRRFQTLIALMLS 189
Query: 158 SQTKDEVNHAAMGRL---------------KEHG-------------------------- 176
SQTKD V AM RL EH
Sbjct: 190 SQTKDTVTAVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENGEPAIKQEAKDGVPPA 249
Query: 177 -------LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
L +ENI S + L LI VGF K K+IK A++I++ YN+DIP+T L
Sbjct: 250 NPSHDSTLNLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEIIRDQYNSDIPSTPAEL 309
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
KLPGVGPKMA+LCM+ AWG GIG
Sbjct: 310 MKLPGVGPKMAYLCMSAAWGKHEGIG---------------------------------- 335
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVG----FGQQICKSQ 345
VDVHVHRI++ GW K KTPE+TR LESWLP+ W E+N L G G ++CKS+
Sbjct: 336 -VDVHVHRITNLWGWHKT-KTPEETRMSLESWLPKDKWHEINKLRCGDCGLAGTKLCKSE 393
>gi|242821687|ref|XP_002487731.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
gi|218712652|gb|EED12077.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
Length = 443
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 140/308 (45%), Gaps = 75/308 (24%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + +++MR + A VD MG +P+ +R+ LI+LMLSSQTKD V
Sbjct: 150 PSNWEIIYDIVKKMRTANPTALVDTMGCAELHWRASSPKDQRFQTLIALMLSSQTKDTVT 209
Query: 166 HAAMGRL------------------------------------KEHGLTIENICNTSEDV 189
AM RL K LT++N+ S +
Sbjct: 210 AVAMQRLHTELGEGEQPNNPSPSKTLIKKEENDADSIKVALEKKPSTLTVQNVLAVSPER 269
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
L +LI VGF K K+IK + IL+ Y +DIP T E L LPGVGPKMA+LCM+ AWG
Sbjct: 270 LNELIRSVGFHNNKTKYIKQVAIILRDKYESDIPPTPEELMALPGVGPKMAYLCMSAAWG 329
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
GIG VDVHVHRI++ GW K
Sbjct: 330 KYLGIG-----------------------------------VDVHVHRITNLWGW-HATK 353
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LNKDLCPQGKKELAE 367
TPE+TR L+ WLP W E+N LL+G GQ C C C LC K L
Sbjct: 354 TPEETRIALQLWLPRDKWHEINKLLIGLGQTACLPVGRRCGECDLAGTGLCKSEIKGLVA 413
Query: 368 RVKKSPKK 375
+ K+ K+
Sbjct: 414 KTKREVKE 421
>gi|219119818|ref|XP_002180661.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408134|gb|EEC48069.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 119/234 (50%), Gaps = 37/234 (15%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE-VN 165
PA W+++ + E+RK AP D G + + P R+ VLISLMLSSQTKD V
Sbjct: 2 PAGWEDIYALVVELRKDRTAPCDDSGCEALPDRTQTPRDFRFQVLISLMLSSQTKDATVG 61
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
A K + L +E+I L I VGF K K IK +ILK+ ++NDIP T
Sbjct: 62 EAIRSMQKANVLNVESIVAMDASELNSYINKVGFHNNKTKFIKQTVEILKEKFDNDIPPT 121
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ +LPGVGPKMA++C N AW TGIG
Sbjct: 122 ASIMMELPGVGPKMAYICENVAWNRQTGIG------------------------------ 151
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQ 339
VD H+HR+ + L W K TPE TR +LESWLP W+EVN L VGFGQ
Sbjct: 152 -----VDTHMHRLFNALNWVKS-NTPEQTRVQLESWLPRDKWAEVNLLWVGFGQ 199
>gi|6319304|ref|NP_009387.1| bifunctional N-glycosylase/AP lyase NTG1 [Saccharomyces cerevisiae
S288c]
gi|401436|sp|P31378.1|NTG1_YEAST RecName: Full=Mitochondrial DNA base excision repair N-glycosylase
1; Flags: Precursor
gi|171860|gb|AAC04942.1| Ntg1p: endonuclease III-like glycosylase 1 [Saccharomyces
cerevisiae]
gi|207347995|gb|EDZ73989.1| YAL015Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272284|gb|EEU07269.1| Ntg1p [Saccharomyces cerevisiae JAY291]
gi|259144698|emb|CAY77639.1| Ntg1p [Saccharomyces cerevisiae EC1118]
gi|285810187|tpg|DAA06973.1| TPA: bifunctional N-glycosylase/AP lyase NTG1 [Saccharomyces
cerevisiae S288c]
gi|323334796|gb|EGA76168.1| Ntg1p [Saccharomyces cerevisiae AWRI796]
gi|323338890|gb|EGA80104.1| Ntg1p [Saccharomyces cerevisiae Vin13]
gi|392301261|gb|EIW12349.1| Ntg1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 142/300 (47%), Gaps = 68/300 (22%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V +A P R VL+ +M
Sbjct: 93 PYKFQETYARMRVLRSKILAPVDIIG-GSSIPVTVASKCGISKEQISPRDYRLQVLLGVM 151
Query: 156 LSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK+
Sbjct: 152 LSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAKY 211
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 212 ILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGI------------ 259
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLPE 324
CVDVHV R++ W KTP+ TR +L++WLP+
Sbjct: 260 -----------------------CVDVHVDRLTKLWKWVDAQKCKTPDQTRTQLQNWLPK 296
Query: 325 SLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSPK 374
LW+E+N LLVGFGQ I KS+ + L+ DL Q KE+ + + PK
Sbjct: 297 GLWTEINGLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDLQSQLYKEIQQNIMSYPK 356
>gi|365767221|gb|EHN08706.1| Ntg1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 142/300 (47%), Gaps = 68/300 (22%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V +A P R VL+ +M
Sbjct: 93 PYKFQETYARMRVLRSKILAPVDIIG-GSSIPVTVASKCGISKEQISPRDYRLQVLLGVM 151
Query: 156 LSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK+
Sbjct: 152 LSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAKY 211
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 212 ILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGI------------ 259
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLPE 324
CVDVHV R++ W KTP+ TR +L++WLP+
Sbjct: 260 -----------------------CVDVHVDRLTKLWKWVDAQKCKTPDQTRTQLQNWLPK 296
Query: 325 SLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSPK 374
LW+E+N LLVGFGQ I KS+ + L+ DL Q KE+ + + PK
Sbjct: 297 GLWTEINGLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDLQSQLYKEIQQNIMSYPK 356
>gi|151941378|gb|EDN59749.1| DNA glycosylase [Saccharomyces cerevisiae YJM789]
gi|349576238|dbj|GAA21410.1| K7_Ntg1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 143/300 (47%), Gaps = 68/300 (22%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V +A P R VL+ +M
Sbjct: 93 PYKFQETYARMRVLRSKILAPVDIIG-GSSIPVTVASKCGISKEQISPRDYRLQVLLGVM 151
Query: 156 LSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK+
Sbjct: 152 LSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAKY 211
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 212 ILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGI------------ 259
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPE 324
CVDVHV R++ W + KTP+ TR +L++WLP+
Sbjct: 260 -----------------------CVDVHVDRLTKLWKWVDPQKCKTPDQTRTQLQNWLPK 296
Query: 325 SLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSPK 374
LW+E+N LLVGFGQ I KS+ + L+ DL Q KE+ + + PK
Sbjct: 297 GLWTEINGLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDLQSQLYKEIQQNIMSYPK 356
>gi|50289277|ref|XP_447069.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526378|emb|CAG60002.1| unnamed protein product [Candida glabrata]
Length = 468
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 140/299 (46%), Gaps = 62/299 (20%)
Query: 74 SEKLGKRTLLKKQNVHNK------DPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAP 127
SE K + + NV N+ D I + D + K P ++ E+ +R MR AP
Sbjct: 81 SENYFKWIVSRNGNVPNRWSQPFDDTIFTDLDEESFKLLPKNFPEIYKKMRWMRSFIRAP 140
Query: 128 VDAMGWDHSANV----------DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH-- 175
VD +G +I P R VL+ +MLS+QTKDEV M + ++
Sbjct: 141 VDLIGGSSIPMTVGEICGIKKSEILPRNYRLQVLVGVMLSAQTKDEVTAMGMYNIMKYCI 200
Query: 176 -------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
G+T++ + E VL +LI VGF K KA IK + IL + Y+ D+P+ +
Sbjct: 201 EELKDAQGITLDALLRIDEQVLDELIHSVGFHKRKANFIKRTAAILNEKYDQDVPDNVTD 260
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
+ LPGVGPKM +L + AWG + GI
Sbjct: 261 ILGLPGVGPKMGYLTLQKAWGKIEGI---------------------------------- 286
Query: 289 LCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
CVDVHV R+ W KTP DTRK+L+ WLP LW+E+N LLVGFGQ I KS+
Sbjct: 287 -CVDVHVDRLCKMWKWVDPDKCKTPNDTRKQLQKWLPPRLWTEINGLLVGFGQVIGKSR 344
>gi|164663005|ref|XP_001732624.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
gi|159106527|gb|EDP45410.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
Length = 663
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 136/280 (48%), Gaps = 60/280 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSA------------------NVDIAPEVRRY 148
P W+EV + + R+H PVD MG + + + D R+
Sbjct: 368 PRRWQEVYALLSKERQHIITPVDTMGCEENGQEDRRADRGRRRADGTEESDDDKARRLRF 427
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
L+SLMLSSQTKD V A+ +L+ GLT+ ++ + + + I V F++ K
Sbjct: 428 TTLVSLMLSSQTKDPVTADAVYKLQTRLPDGLTLVSLRDAPPEQITDCIAKVSFYRRKTD 487
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
++K + IL++ ++ D+P T++ LC++PGVGPKMA L M + G+ GIG
Sbjct: 488 YLKTMTRILEEKHHGDVPQTVDELCEIPGVGPKMAFLQM-QSMGLNVGIG---------- 536
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HVHRIS+RLGW K KTPE TR L+SWLP
Sbjct: 537 -------------------------VDTHVHRISNRLGWCKT-KTPEQTRLALQSWLPRD 570
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCL--NKDLCPQGKK 363
L +N +VGFGQ IC P C+ C LCP ++
Sbjct: 571 LHGVINKQMVGFGQVICLPVSPRCDLCYIGQAKLCPSYRR 610
>gi|154411860|ref|XP_001578964.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121913166|gb|EAY17978.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 239
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 122/247 (49%), Gaps = 39/247 (15%)
Query: 114 LNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLK 173
L + E RK APVD MG D +A I P+ R+ +LISLMLSSQTKD++ HAA +L+
Sbjct: 12 LKTLIEYRKTHLAPVDTMGCDITAE-KINPKDHRFQILISLMLSSQTKDQMTHAAALKLQ 70
Query: 174 --EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCK 231
E G N+ + + I VGF K +I+ A+ + Y++D+P T++ +
Sbjct: 71 KIEGGFNAPNLMKADRETILSCISCVGFANRKTDYIREAAKRCHEKYDDDVPKTLKEFTE 130
Query: 232 LPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCV 291
GVG KM L M W GIG V
Sbjct: 131 FKGVGIKMGTLAMARCWNEQIGIG-----------------------------------V 155
Query: 292 DVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCET 351
DVHVHRIS+ LGW K P++T L+ LP+ +W EVNH LVGFGQ +C S++ CE
Sbjct: 156 DVHVHRISNLLGWVKT-NHPDETETALQKVLPKDIWPEVNHCLVGFGQTVCGSKKRKCEE 214
Query: 352 CLNKDLC 358
C C
Sbjct: 215 CPISSTC 221
>gi|365762207|gb|EHN03808.1| Ntg1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 390
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 139/300 (46%), Gaps = 68/300 (22%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V IA P R VL+ +M
Sbjct: 84 PYKFQETYARMRVLRSKILAPVDIVG-GSSIPVTIASKCGLSKELISPRDYRLQVLLGVM 142
Query: 156 LSSQTKDEVNHAAMGRLK---------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + SE L +LI VGF KAK+
Sbjct: 143 LSSQTKDEVTAMAMYNIMRYCMDELHVEQGMTLEAVLQISESKLDELIHSVGFHTRKAKY 202
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ IL+ + D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 203 LLSTCQILQDRHLGDVPATINELLALPGVGPKMAYLTLQKAWGKIEGI------------ 250
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPE 324
CVDVHV R++ W + K P+ TR +L++WLP
Sbjct: 251 -----------------------CVDVHVDRLTKIWKWVDPQKCKNPDQTRIQLQNWLPR 287
Query: 325 SLWSEVNHLLVGFGQQICKSQRPS----------CETCLNKDLCPQGKKELAERVKKSPK 374
LW+E+N LLVGFGQ I KS+ S L+ DL Q KE+ + + PK
Sbjct: 288 GLWTEINGLLVGFGQIITKSRNVSDLSKFLPPSDPRNSLDWDLQSQLYKEIQQNIMSYPK 347
>gi|401626951|gb|EJS44864.1| ntg1p [Saccharomyces arboricola H-6]
Length = 401
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 138/300 (46%), Gaps = 68/300 (22%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V +A P+ R VL+ +M
Sbjct: 93 PYKFQETYARMRVLRSKILAPVDIVG-GSSIPVTVASKCGISRDQISPKNYRLQVLLGVM 151
Query: 156 LSSQTKDEVNHAAMGRLK---------EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + SE L +LI VGF KAK+
Sbjct: 152 LSSQTKDEVTAMAMYNIMQYCIQELGVEQGITLEAVLQISETKLDELIHSVGFHTRKAKY 211
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL+ + D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 212 ILATCQILQDQHLRDVPATINELLALPGVGPKMAYLTLQKAWGKIEGI------------ 259
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPE 324
CVDVHV R++ W + +TP+ TR L+ WLP
Sbjct: 260 -----------------------CVDVHVDRLTKAWKWVDPQKCRTPDQTRILLQDWLPR 296
Query: 325 SLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSPK 374
LW+E+N LLVGFGQ I KS+ ++ DL Q KE+ + + PK
Sbjct: 297 GLWTEINGLLVGFGQIITKSRNVDDLLKFLPLDDPRNSIDLDLQSQLYKEIQQNIMSYPK 356
>gi|449328842|gb|AGE95118.1| endonuclease III [Encephalitozoon cuniculi]
Length = 238
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 130/257 (50%), Gaps = 53/257 (20%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE-- 174
I+ RK +PVD MG + + E RR+H+L+SL+LSSQTKDEV + AM RL++
Sbjct: 19 IKMQRKDIVSPVDTMGCSITPSCRTEEE-RRFHILVSLLLSSQTKDEVTYEAMARLRKLL 77
Query: 175 -----------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
GLTIE + N+ + + I VGF KA ++K ++IL++ +P
Sbjct: 78 PESAATDGEARGGLTIERVANSDVKHINECIKKVGFHNRKAANLKKIAEILRE---KGLP 134
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
++ L LPG+G KMA L M+HA GI
Sbjct: 135 REMKDLISLPGIGNKMALLYMSHACNRTVGIS---------------------------- 166
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+R+G K + E TR+ELE +P W +N++LVGFGQ IC
Sbjct: 167 -------VDTHVHRISNRIGLVKT-RDVESTRRELERVVPREEWKTINNILVGFGQTICV 218
Query: 344 SQRPSCETCLNKDLCPQ 360
++RP CE C + CP
Sbjct: 219 AKRPKCEECCIRGRCPS 235
>gi|327353694|gb|EGE82551.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ATCC 18188]
Length = 539
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 103/200 (51%), Gaps = 38/200 (19%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI S L +LI VGF K K+IK A+ IL+ YN+DIP T E L +LPGVG
Sbjct: 351 LTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVG 410
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 411 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 435
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LN 354
RI++ GW K KTPE+TR LESWLP+ W EVN LLVG GQ +C C C
Sbjct: 436 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEVNKLLVGLGQTVCLPVARRCGECELAG 494
Query: 355 KDLCPQGKKELAERVKKSPK 374
LC K +VK+ K
Sbjct: 495 TGLCKSEIKGWTAKVKRERK 514
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+++ + ++EMR K+ APVD MG D +P RR+H+LI+LMLSSQTKD V
Sbjct: 169 PSNWEKIYDIVKEMRRKNPTAPVDTMGCSQLYWRDSSPRDRRFHILIALMLSSQTKDTVT 228
Query: 166 HAAMGRL 172
AM RL
Sbjct: 229 AIAMQRL 235
>gi|163785187|ref|ZP_02179872.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159879544|gb|EDP73363.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 218
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 111/211 (52%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS ++S +TKDEV A RL T E I SE+ + +LI P GF+K KAK I
Sbjct: 36 FKVLISTIISLRTKDEVTAKASKRLFSVAKTPEEISKLSEEKIAELIYPAGFYKNKAKTI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S I+ + YN +P+T+E L K GVG K A+L ++ G K
Sbjct: 96 KDISKIILEKYNGKVPDTLEKLLKFKGVGRKTANLVLSE------GFNK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD+HVHRIS+RLG+ K KTPE T L LPE W
Sbjct: 139 -------------------PAICVDIHVHRISNRLGFVKT-KTPEKTEFALMEKLPEKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+++N LLVGFGQ ICK P C C ++LC
Sbjct: 179 NKINKLLVGFGQTICKPVSPYCSKCPVENLC 209
>gi|367004330|ref|XP_003686898.1| hypothetical protein TPHA_0H02610 [Tetrapisispora phaffii CBS 4417]
gi|357525200|emb|CCE64464.1| hypothetical protein TPHA_0H02610 [Tetrapisispora phaffii CBS 4417]
Length = 455
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 121/258 (46%), Gaps = 56/258 (21%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMG---WDHSANV-------DIAPEVRRYHVLISLML 156
P ++ + IR +R PVD MG + V I P+ R L+ +ML
Sbjct: 120 PDNFISTYSKIRLIRSMIRTPVDTMGCATLPLTVGVKVGIKKSQIIPKNYRLQTLLGVML 179
Query: 157 SSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
S+QTKDEV A+ + E+ GL ++++ L +I VGF K K I
Sbjct: 180 SAQTKDEVTAQAIHNIMEYCIDELKSEEGLNLDSLLEIDNKTLDDMIYSVGFHNRKTKFI 239
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + +LK+ YN+DIP+ I+ L LPGVGPKM +L M AWG + GI
Sbjct: 240 KETAKLLKEKYNSDIPSNIKDLLALPGVGPKMGYLVMQKAWGKIDGI------------- 286
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWLPES 325
CVDVHVHR + W K TPE TRK LE WLP
Sbjct: 287 ----------------------CVDVHVHRFAKLFKWVDPKKCTTPEHTRKALEKWLPHE 324
Query: 326 LWSEVNHLLVGFGQQICK 343
LW E+N +LVGFGQ I +
Sbjct: 325 LWYEINSVLVGFGQVISE 342
>gi|385303995|gb|EIF48033.1| endonuclease iii [Dekkera bruxellensis AWRI1499]
Length = 260
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 139/283 (49%), Gaps = 61/283 (21%)
Query: 120 MRKHGDAPVDAMGWDH-SANVDIAPE--VRRYHVLISLMLSSQTKDEVNHAAMGRLKEH- 175
MR APVD +G DH S V E V R+ VLISLMLS+QTKDEVN+ M +L+++
Sbjct: 1 MRAKVKAPVDKIGCDHISTAVSGLKEGPVWRFQVLISLMLSAQTKDEVNYQXMKKLQDYF 60
Query: 176 -------GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
GL++E I +T Z L +LI VGF KA IK +++LK+ Y+ +IP ++
Sbjct: 61 ISHGYKNGLSMEAILDTDZAKLDELIYKVGFHXRKANFIKRTAEMLKEKYDGEIPKDVKK 120
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
+ + PGVGPKM +L + AWGI +GIG
Sbjct: 121 IMEFPGVGPKMGYLFLQIAWGICSGIG--------------------------------- 147
Query: 289 LCVDVHVHRISHRLGWTKVFKT----PEDTRKELESWLPE--SLWSEVNHLLVGFGQQIC 342
VD H+ R++ W ++ PE RK E L + WS +N LVGFGQ IC
Sbjct: 148 --VDTHMARMAGWYHWVPKWQXGKPEPEYVRKCFEKMLADHKEEWSVINPTLVGFGQTIC 205
Query: 343 KSQRPSCETCL--NKDLCPQGKKELAERVK-------KSPKKR 376
P C+ C LCP K L RV+ KSP+K+
Sbjct: 206 LPXAPRCDICTISRTGLCPAVDKALLRRVEINRRSGVKSPQKK 248
>gi|19173415|ref|NP_597218.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
gi|74621135|sp|Q8SRB8.1|NTH1_ENCCU RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|19171004|emb|CAD26394.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
Length = 238
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 130/257 (50%), Gaps = 53/257 (20%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE-- 174
I+ RK +PVD MG + + E RR+H+L+SL+LSSQTKDEV + AM RL++
Sbjct: 19 IKMQRKDIVSPVDTMGCSITPSCRTEEE-RRFHILVSLLLSSQTKDEVTYEAMARLRKLL 77
Query: 175 -----------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
GLTIE + N+ + + I VGF KA ++K ++IL++ +P
Sbjct: 78 PESAATDGEARGGLTIERVANSDVKHINECIKKVGFHNRKAANLKKIAEILRE---KGLP 134
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
++ L LPG+G KMA L M+HA GI
Sbjct: 135 REMKDLISLPGIGNKMALLYMSHACNRTVGIS---------------------------- 166
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRIS+R+G + + E TR+ELE +P W +N++LVGFGQ IC
Sbjct: 167 -------VDTHVHRISNRIGLVRT-RDVESTRRELERVVPRKEWKTINNILVGFGQTICV 218
Query: 344 SQRPSCETCLNKDLCPQ 360
++RP CE C + CP
Sbjct: 219 AKRPRCEECCIRGRCPS 235
>gi|239614218|gb|EEQ91205.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ER-3]
Length = 415
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 103/200 (51%), Gaps = 38/200 (19%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI S L +LI VGF K K+IK A+ IL+ YN+DIP T E L +LPGVG
Sbjct: 227 LTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVG 286
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 287 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 311
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LN 354
RI++ GW K KTPE+TR LESWLP+ W EVN LLVG GQ +C C C
Sbjct: 312 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEVNKLLVGLGQTVCLPVARRCGECELAG 370
Query: 355 KDLCPQGKKELAERVKKSPK 374
LC K +VK+ K
Sbjct: 371 TGLCKSEIKGWTAKVKRERK 390
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREM-RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+++ + ++EM RK+ APVD MG D +P RR+H+LI+LMLSSQTKD V
Sbjct: 48 PSNWEKIYDIVKEMRRKNPTAPVDTMGCSQLYWRDSSPRDRRFHILIALMLSSQTKDTVT 107
Query: 166 HAAMGRL 172
AM RL
Sbjct: 108 AIAMQRL 114
>gi|261204483|ref|XP_002629455.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
gi|239587240|gb|EEQ69883.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
Length = 416
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 103/200 (51%), Gaps = 38/200 (19%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI S L +LI VGF K K+IK A+ IL+ YN+DIP T E L +LPGVG
Sbjct: 228 LTLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVG 287
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 288 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 312
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC--LN 354
RI++ GW K KTPE+TR LESWLP+ W EVN LLVG GQ +C C C
Sbjct: 313 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEVNKLLVGLGQTVCLPVARRCGECELAG 371
Query: 355 KDLCPQGKKELAERVKKSPK 374
LC K +VK+ K
Sbjct: 372 TGLCKSEIKGWTAKVKRERK 391
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+++ + ++EMR K+ APVD MG D +P RR+H+LI+LMLSSQTKD V
Sbjct: 48 PSNWEKIYDIVKEMRRKNPTAPVDTMGCSQLYWRDSSPRDRRFHILIALMLSSQTKDTVT 107
Query: 166 HAAMGRL 172
AM RL
Sbjct: 108 AIAMQRL 114
>gi|116180194|ref|XP_001219946.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
gi|88185022|gb|EAQ92490.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
Length = 977
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 137/297 (46%), Gaps = 82/297 (27%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH--------- 175
+A VD MG + A + RR+H L++LMLSSQTKD VN AAM RL+
Sbjct: 581 NAAVDTMGCERLALPGASARDRRFHTLVALMLSSQTKDTVNAAAMARLQNELPPHTPGAP 640
Query: 176 -GLTIENICNTSEDVLGKLIIPVGFW----KTKA-------------------------- 204
GL +EN+ +I G + KTK
Sbjct: 641 PGLNLENMLARRPRPCSNELIREGRFFDNNKTKVCIYGPPRPPSPPPQAATNPHPPSSLL 700
Query: 205 -KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN--HAWGIVTGIGKDESRQ 261
+++K + +L+ N+N+DIP TI L LPGVGPKMAHLCM+ + W V GIG
Sbjct: 701 NRYLKTTAALLRDNFNSDIPPTIAGLTSLPGVGPKMAHLCMSAPNGWNRVEGIG------ 754
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELES 320
VDVHVHRI++ GW +TPE+TR LES
Sbjct: 755 -----------------------------VDVHVHRITNLWGWQAPASRTPEETRAALES 785
Query: 321 WLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
WLP W E+N LLVG GQ +C P C + ++ +G + A+R K + KR+
Sbjct: 786 WLPRDRWREINWLLVGLGQSVCL---PVGRRCGDCEVGLRGLCKSADRAKVAEGKRR 839
>gi|410083964|ref|XP_003959559.1| hypothetical protein KAFR_0K00690 [Kazachstania africana CBS 2517]
gi|372466151|emb|CCF60424.1| hypothetical protein KAFR_0K00690 [Kazachstania africana CBS 2517]
Length = 437
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 132/276 (47%), Gaps = 57/276 (20%)
Query: 87 NVHNKDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDH-------SANV 139
NV N+ IP +++ T +P ++KE+ +R +R PVD +G S +
Sbjct: 99 NVPNRWEIP-LDESIFTDDQPKYFKEIYLKLRRLRSKVTPPVDLVGGSSIPLTVGMSCGI 157
Query: 140 ---DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSE 187
I P R VLI +MLSSQTKDEV M + ++ G+T++ + E
Sbjct: 158 PKDQIEPINYRLQVLIGVMLSSQTKDEVTAKGMFNIMKYCIDELNISQGMTLQGLRKIDE 217
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
L +LI VGF KAK+IK ++L +++DIP I + LPGVGPKMA+L + A
Sbjct: 218 AKLDELIKSVGFHTRKAKYIKQTCELLVSRFDSDIPTNITDMLSLPGVGPKMAYLTLQKA 277
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV 307
WG + GI CVDVHV R+ W
Sbjct: 278 WGKLEGI-----------------------------------CVDVHVDRLCKLFKWVNP 302
Query: 308 --FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
KTP TR+ELE WLP LW E+N LLVGFGQ I
Sbjct: 303 DKCKTPNHTRQELEKWLPRPLWKEINSLLVGFGQMI 338
>gi|325088276|gb|EGC41586.1| endonuclease III [Ajellomyces capsulatus H88]
Length = 533
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 95/176 (53%), Gaps = 36/176 (20%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI L +LI VGF K K+IK A+ IL+ YN+DIP T+E L +LPGVG
Sbjct: 347 LTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPPTVEGLMRLPGVG 406
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 407 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 431
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
RI++ GW K KTPE+TR LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 432 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 486
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 163 PSNWENIYDIVKEMRRKNPTAPVDTMGCSQLYWRSSSPRQRRFHILIALMLSSQTKDTVT 222
Query: 166 HAAMGRL 172
AM RL
Sbjct: 223 AIAMQRL 229
>gi|225559205|gb|EEH07488.1| DNA base excision repair N-glycosylase 1, mitochondrial precursor
[Ajellomyces capsulatus G186AR]
Length = 535
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 95/176 (53%), Gaps = 36/176 (20%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI L +LI VGF K K+IK A+ IL+ YN+DIP T+E L +LPGVG
Sbjct: 348 LTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAVILRDEYNSDIPPTVEGLMRLPGVG 407
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 408 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 432
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
RI++ GW K KTPE+TR LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 433 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 487
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 163 PSNWENIYDIVKEMRRKNPTAPVDTMGCSQLYWRSSSPRQRRFHILIALMLSSQTKDTVT 222
Query: 166 HAAMGRL 172
AM RL
Sbjct: 223 AIAMQRL 229
>gi|240282136|gb|EER45639.1| endonuclease III [Ajellomyces capsulatus H143]
Length = 533
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 95/176 (53%), Gaps = 36/176 (20%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI L +LI VGF K K+IK A+ IL+ YN+DIP T+E L +LPGVG
Sbjct: 347 LTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPPTVEGLMRLPGVG 406
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 407 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 431
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
RI++ GW K KTPE+TR LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 432 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 486
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREMR-KHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + ++EMR K+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 163 PSNWENIYDIVKEMRRKNPTAPVDTMGCSQLYWRSSSPRQRRFHILIALMLSSQTKDTVT 222
Query: 166 HAAMGRL 172
AM RL
Sbjct: 223 AIAMQRL 229
>gi|154273841|ref|XP_001537772.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415380|gb|EDN10733.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 532
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 94/176 (53%), Gaps = 36/176 (20%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT+ENI L +LI VGF K K+IK A+ IL+ YN DIP T+E L +LPGVG
Sbjct: 347 LTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNFDIPPTVEGLMRLPGVG 406
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKMA+LCM+ AWG GIG VDVHVH
Sbjct: 407 PKMAYLCMSSAWGRDEGIG-----------------------------------VDVHVH 431
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
RI++ GW K KTPE+TR LESWLP+ W E+N LLVG GQ +C C C
Sbjct: 432 RITNLWGWHKT-KTPEETRAALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGEC 486
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 107 PAHWKEVLNNIREM-RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P++W+ + + ++EM RK+ APVD MG +P RR+H+LI+LMLSSQTKD V
Sbjct: 163 PSNWENIYDIVKEMRRKNPTAPVDTMGCSQLYWRSSSPRQRRFHILIALMLSSQTKDTVT 222
Query: 166 HAAMGRL 172
AM RL
Sbjct: 223 AIAMQRL 229
>gi|284161459|ref|YP_003400082.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
gi|284011456|gb|ADB57409.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
Length = 211
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 49/250 (19%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
+W ++ + ++ + APV M + + VL+S +LS++TKDE H A
Sbjct: 2 NWYWIVETMEKIGRERKAPVYEMNLNDP-----------FMVLVSAILSTRTKDEQTHKA 50
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
+ +L E++ SED + +LI PVGF +TKAK++K +++L NY +P+ +E
Sbjct: 51 VRKLFSVVKKPEDLLKLSEDDIDELIKPVGFHRTKAKNLKKLAEVLVNNYGGKVPDNLEE 110
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L KLPGVG K+A++ + H +GK P
Sbjct: 111 LLKLPGVGRKVANIVLAH-------LGK------------------------------PA 133
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
+ VD HVHRI++RLG + K PE+T KEL+ +P+ LWS +N VGFGQ +CK +P
Sbjct: 134 IAVDTHVHRIANRLGVVRT-KRPEETEKELKKIVPKDLWSRLNKAFVGFGQTVCKPLKPL 192
Query: 349 CETCLNKDLC 358
CE C K C
Sbjct: 193 CEECPFKSFC 202
>gi|225848427|ref|YP_002728590.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644019|gb|ACN99069.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Sulfurihydrogenibium azorense Az-Fu1]
Length = 216
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/253 (36%), Positives = 127/253 (50%), Gaps = 45/253 (17%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
+ EVL +++ K+ +APV A N Y VLI+ +LS +TKD++ A
Sbjct: 6 FVEVLKILKKESKNWNAPVVAFMGRTENN--------PYKVLIATILSLRTKDQITALAS 57
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RL + T E + N + + KLI PVGF+K KAK IK S I+ + Y +P+ +E L
Sbjct: 58 DRLFKVADTPEKMVNLPAEEIEKLIYPVGFYKNKAKTIKEISKIILEKYAGKVPDNLEDL 117
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
L GVG K A+L ++ + K P +
Sbjct: 118 LSLKGVGRKTANLVLSEGY------------------------------------KKPAI 141
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
CVDVHVHRIS+RLG K KTPE+T +L LP+ W +VN +LV FGQ ICK +P C
Sbjct: 142 CVDVHVHRISNRLGVVKT-KTPEETEFKLMEILPKKYWRDVNWVLVAFGQTICKPIKPMC 200
Query: 350 ETCLNKDLCPQGK 362
+ C K+ C GK
Sbjct: 201 DICPVKNFCEFGK 213
>gi|440800834|gb|ELR21868.1| endonuclease III, putative, partial [Acanthamoeba castellanii str.
Neff]
Length = 129
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 120 MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTI 179
MRK+ DAPVD MG + A D P+V+RY L++LMLSSQTKD+ AA+ RL++HGLT+
Sbjct: 1 MRKNRDAPVDTMGCEVLAE-DAEPKVQRYQTLVALMLSSQTKDQQTAAAIRRLQKHGLTV 59
Query: 180 ENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKM 239
NI +T E+ L +LI VGF + KAK IK S+IL++ Y++DIP E L KLPGVGPKM
Sbjct: 60 GNILDTPENELDELISNVGFHRNKAKFIKRTSEILREEYDDDIPPDYEGLLKLPGVGPKM 119
Query: 240 AHLCMNHAW 248
AHL M AW
Sbjct: 120 AHLTMQCAW 128
>gi|238588806|ref|XP_002391837.1| hypothetical protein MPER_08677 [Moniliophthora perniciosa FA553]
gi|215457043|gb|EEB92767.1| hypothetical protein MPER_08677 [Moniliophthora perniciosa FA553]
Length = 305
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 123/240 (51%), Gaps = 47/240 (19%)
Query: 91 KDPIPDENDTKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYH- 149
+ P P +K P +WK+V + I+EMRK+ APVD MG + ++ P+ R
Sbjct: 96 RKPKPIPQSLEKPHPAPENWKQVYDTIKEMRKNIVAPVDTMG----SVKEVDPKTRHAEQ 151
Query: 150 ---VLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTK 203
L+SLMLSSQTKDEV AA+ +L+ ++IE + E + I VGFW+ K
Sbjct: 152 TLLTLVSLMLSSQTKDEVTDAAISQLRTALGGSISIEGVIAADETTISNAIGKVGFWRRK 211
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
+++K A+ L+ +++D+P T++ LC LPGVGPKMA L + AW + GIG
Sbjct: 212 TQYLKQAAIRLRDEFDSDVPKTVDELCSLPGVGPKMAFLALQVAWNLNHGIG-------- 263
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWL 322
VDVHVHRI++RLGW K K E+TR S L
Sbjct: 264 ---------------------------VDVHVHRITNRLGWHKPPTKNSEETRHVFSSSL 296
>gi|397589414|gb|EJK54652.1| hypothetical protein THAOC_25701, partial [Thalassiosira oceanica]
Length = 470
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 143/301 (47%), Gaps = 60/301 (19%)
Query: 91 KDPIPDENDTKKTKWEPAH-------WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP 143
K P ++ K+ K EP W+++ N + E+RK APVD G + +
Sbjct: 200 KPPAATKSPRKRPKIEPGSLPPPEEGWEDIYNLVEELRKDRTAPVDHDGAEQLPEKNKGE 259
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG--LTIENICNTSEDVLGKLIIPVGFWK 201
+V R+ VL++LMLSSQTKD V M +L++ G LT+ENI + L KL+ VGF
Sbjct: 260 KVYRFQVLVALMLSSQTKDAVVGMTMRKLQQAGAGLTVENIHSMDPQTLNKLLHSVGFHN 319
Query: 202 TKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQ 261
K IK A++ L + Y DIP T + + +L GVGPKMA++ A+G G
Sbjct: 320 NKTVFIKAAAETLIEKYQGDIPPTADEMMELKGVGPKMAYIVEQIAFGESPGF------- 372
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESW 321
H+H+ ++L W KTPE TR +LE W
Sbjct: 373 --------------------------------HMHKNFNKLNWVNS-KTPEQTRVQLEGW 399
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCE---TCLNKDLCPQGKKELAER----VKKSPK 374
LP WSEVN L VGFGQ++ + + TC N P G +L +R VKK K
Sbjct: 400 LPREKWSEVNVLWVGFGQKLQQQKGKLLRKIMTCSN----PLGAMKLVKRLGFDVKKEAK 455
Query: 375 K 375
K
Sbjct: 456 K 456
>gi|18390586|ref|NP_563752.1| endonuclease III [Arabidopsis thaliana]
gi|15294154|gb|AAK95254.1|AF410268_1 At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|23505879|gb|AAN28799.1| At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|332189794|gb|AEE27915.1| endonuclease III [Arabidopsis thaliana]
Length = 314
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 110/199 (55%), Gaps = 37/199 (18%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
P +W++VL IR+M+ +APV+A+ D + + + P+ RR++VLI +LSSQTK+ +
Sbjct: 141 PENWEKVLEGIRKMKPSEEAPVNAVECDRTGSF-LPPKERRFYVLIGTLLSSQTKEHITG 199
Query: 167 AAMGRLKEHGL-TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
AA+ RL ++GL T E I E + +LI PVGF+ KA ++K + I Y+ DIP T
Sbjct: 200 AAVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRT 259
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
+E L LPGVGPK+AHL ++ AW V GI
Sbjct: 260 LEELLSLPGVGPKIAHLVLHVAWNDVQGI------------------------------- 288
Query: 286 IPQLCVDVHVHRISHRLGW 304
CVD HVHRI +RLGW
Sbjct: 289 ----CVDTHVHRICNRLGW 303
>gi|429962695|gb|ELA42239.1| hypothetical protein VICG_00638 [Vittaforma corneae ATCC 50505]
Length = 234
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 127/254 (50%), Gaps = 43/254 (16%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKE-- 174
I++ R +APVD+MG + +++ + +L+ L+LSSQTKDE+ ++A+ L
Sbjct: 7 IKKQRDKLEAPVDSMGSSCVGHA-YPKDIKNFQILVFLLLSSQTKDEITYSAIESLNGTL 65
Query: 175 HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPG 234
LT EN+ N+ E+ + K + VGF K K + S +K + +P T E L KLPG
Sbjct: 66 GILTPENVLNSREEDVSKCLKKVGFHNKKLKFLYEISRKVK----DKMPETFEELLKLPG 121
Query: 235 VGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVH 294
VG KMA+L +NHA G GI VD H
Sbjct: 122 VGKKMANLYLNHALGRNEGIS-----------------------------------VDTH 146
Query: 295 VHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN 354
VHR+S+R+G K PE TR+ LES W EVN + VGFGQ ICK+ +P C C
Sbjct: 147 VHRVSNRIGLV-CTKDPEHTRRALESIFDRDEWPEVNRVFVGFGQMICKAIKPKCGECSV 205
Query: 355 KDLCPQGKKELAER 368
+D CP +A +
Sbjct: 206 QDRCPYYNMVIASK 219
>gi|195953263|ref|YP_002121553.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
gi|195932875|gb|ACG57575.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
Length = 225
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 113/211 (53%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+ +LS++TKDE RL +IE++ N E+ L +LI VGF+ TKAK++
Sbjct: 36 FRVLVCALLSTRTKDETTARVCERLFVKVKSIEDLYNIKEEELKELIYGVGFYNTKAKNL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL + Y+ IPNT+E L +LPGVG K+A+L + +G
Sbjct: 96 KELSKILVEKYSAKIPNTLEELLELPGVGLKVANLVLAEGFG------------------ 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP +CVDVHVHRI++R K KTPE T + L++ LP+ W
Sbjct: 138 ------------------IPAICVDVHVHRITNRWCLVKT-KTPEQTEEALKNILPKKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N LV FGQ+ICK +PSC C + C
Sbjct: 179 IDINRYLVSFGQRICKPIKPSCNICPIERFC 209
>gi|451947339|ref|YP_007467934.1| exodeoxyribonuclease III [Desulfocapsa sulfexigens DSM 10523]
gi|451906687|gb|AGF78281.1| exodeoxyribonuclease III [Desulfocapsa sulfexigens DSM 10523]
Length = 478
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 107/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDEV A RL + G T+E++ L K+I PVGF+K KAK++
Sbjct: 33 FKVLVATILSARTKDEVTAEASERLFKQGGTVEDLAKIDVATLEKIIFPVGFYKNKAKYL 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
D L ++ + +PNT+E L LPGVG K A+L + A+G
Sbjct: 93 AALPDKLAADFGSKVPNTMEGLLTLPGVGRKTANLVLAQAFG------------------ 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP +CVD HVHRI + G+ + KTPE T L LPE W
Sbjct: 135 ------------------IPAICVDTHVHRIMNIWGYVET-KTPEQTEMALRKKLPEKYW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
VN LLV FGQ C+ P C+ C+ + C
Sbjct: 176 ILVNSLLVAFGQGTCRPVGPHCDRCVLAESC 206
>gi|288817355|ref|YP_003431702.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|384128125|ref|YP_005510738.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobacter
thermophilus TK-6]
gi|288786754|dbj|BAI68501.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308750962|gb|ADO44445.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobacter
thermophilus TK-6]
Length = 216
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+ ++S++TKDE RL E ++++ N E+ L +L+ PVGF+K KAK +
Sbjct: 36 FRVLVCALISTRTKDETTAMVCKRLFERIKNVDDLYNIDEEELSRLLYPVGFYKNKAKFL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++ +KKNY++ +PN +E L KL GVG K+A+L ++ +G
Sbjct: 96 KSIAEEIKKNYSSQVPNKLEDLLKLKGVGRKVANLVLSEGYG------------------ 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP +CVD HVHRI++R K K PE+T ++L LPE W
Sbjct: 138 ------------------IPAICVDTHVHRITNRWCLIKS-KDPEETERKLTEILPEKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
E N LLV FGQ +CK +P C C ++ C K L
Sbjct: 179 IEFNKLLVAFGQTLCKPVKPLCGVCPIREYCEYEFKTL 216
>gi|383788949|ref|YP_005473518.1| putative DNA glycosylase/AP lyase [Caldisericum exile AZM16c01]
gi|381364586|dbj|BAL81415.1| putative DNA glycosylase/AP lyase [Caldisericum exile AZM16c01]
Length = 218
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS +TKDE A RL E T E++ SE + KLI PVGF+K KAK I
Sbjct: 36 FKILIGTILSLRTKDETTEEAANRLFEVVKTPEDLIKLSEKDIEKLIYPVGFYKRKAKQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L + Y+ +PN +E L KL GVG K A+L + A+ D+
Sbjct: 96 KEVAKTLIEKYDGRVPNDLEELLKLKGVGRKTANLVITEAF--------DDY-------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+RLGW K K PE T EL LP+ W
Sbjct: 140 --------------------GICVDTHVHRISNRLGWVKT-KNPEQTEMELRKILPKKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N +LV FGQ ICK P C C + LCP+
Sbjct: 179 KTINPILVTFGQNICKPISPLCSKCPIEPLCPK 211
>gi|323306155|gb|EGA59887.1| Ntg1p [Saccharomyces cerevisiae FostersB]
Length = 249
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 118/241 (48%), Gaps = 56/241 (23%)
Query: 155 MLSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLXLPGVGPKMAYLTLQKAWGKIEGI----------- 109
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLP 323
CVDVHV R++ W KTP+ TR +L++WLP
Sbjct: 110 ------------------------CVDVHVDRLTKLWKWVDXQKCKTPDQTRTQLQNWLP 145
Query: 324 ESLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSP 373
+ LW+E+N LLVGFGQ I KS+ + L+ DL Q KE+ + + P
Sbjct: 146 KGLWTEINXLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDLQSQLYKEIQQNIMSYP 205
Query: 374 K 374
K
Sbjct: 206 K 206
>gi|323356328|gb|EGA88130.1| Ntg1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 118/241 (48%), Gaps = 56/241 (23%)
Query: 155 MLSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGI----------- 109
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLP 323
CVDVHV R++ W KTP+ TR +L++WLP
Sbjct: 110 ------------------------CVDVHVDRLTKLWKWVDAQKCKTPDQTRTQLQNWLP 145
Query: 324 ESLWSEVNHLLVGFGQQICKSQR----------PSCETCLNKDLCPQGKKELAERVKKSP 373
+ LW+E+N LLVGFGQ I KS+ + L+ DL Q KE+ + + P
Sbjct: 146 KGLWTEINGLLVGFGQIITKSRNLGDMLQFLPPDDPRSSLDWDLQSQLYKEIQQNIMSYP 205
Query: 374 K 374
K
Sbjct: 206 K 206
>gi|327398938|ref|YP_004339807.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
gi|327181567|gb|AEA33748.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
Length = 217
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 112/227 (49%), Gaps = 37/227 (16%)
Query: 132 GWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLG 191
G+ +A + Y VLIS +LS +TKDE A RL + I + +ED +
Sbjct: 19 GFVEPVVTQVAKDKDPYKVLISTILSLRTKDETTLRASIRLFDIADNIYKLNELNEDEIE 78
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
+LI PVGF+KTKAK++K + I+ +NY IP+ ++ L KLP VG K A+L +
Sbjct: 79 RLIYPVGFYKTKAKNLKKIARIIIENYGGKIPDDLDELLKLPNVGRKTANLVL------A 132
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTP 311
G GK P +CVD+HVHRIS+RLG KTP
Sbjct: 133 KGFGK------------------------------PAICVDIHVHRISNRLGLVDT-KTP 161
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E+T L LP+ W E N LLV FGQ IC+ P C C+ C
Sbjct: 162 EETEFALSKILPKKYWIEFNDLLVPFGQNICRPISPFCSKCIISKYC 208
>gi|188997187|ref|YP_001931438.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932254|gb|ACD66884.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 215
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 111/216 (51%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS +LS +TKD++ A RL + T E I SE + KLI PVGF++ KAK I
Sbjct: 36 FKILISTILSLRTKDQITAQASDRLFKVADTPEKILKLSEKEIVKLIYPVGFYRNKAKII 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL + +N+ +P+ +E L GVG K A+L ++ G GK
Sbjct: 96 KEISKILVEKFNSKVPDDLETLLSFKGVGRKTANLVLSE------GFGK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVDVHVHRIS+R+G K K PE+T +L LP+ W
Sbjct: 139 -------------------PAICVDVHVHRISNRIGLVKT-KNPEETEFKLMKILPKKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
++N +LV FGQ ICK +P C+ C C KK
Sbjct: 179 KDINFVLVAFGQTICKPVKPKCKECPIVKYCEHDKK 214
>gi|432328581|ref|YP_007246725.1| putative endoIII-related endonuclease [Aciduliprofundum sp.
MAR08-339]
gi|432135290|gb|AGB04559.1| putative endoIII-related endonuclease [Aciduliprofundum sp.
MAR08-339]
Length = 209
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ ++S +TKDEV ++ RL E ++ N D + +LI P GF+K KA+ I
Sbjct: 27 FRVLIATVISQRTKDEVTYSVAERLFEKYPDPSSLKNAPVDEIARLIYPAGFYKQKARKI 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + I+ + Y+ +P T++ L KLPGVG K A++ ++ + Q +++
Sbjct: 87 KEIARIIDEEYDGVVPRTLDELLKLPGVGRKTANIVLSRCFD-----------QDVIA-- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VDVHVHRIS+RLGW +TPE+T +EL LP+ W
Sbjct: 134 -----------------------VDVHVHRISNRLGWVST-RTPEETERELMKILPKKYW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E+N LLV FG+ IC+ P C+ C D C
Sbjct: 170 REINELLVMFGRTICRPVGPKCDECPVSDFC 200
>gi|339500707|ref|YP_004698742.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta caldaria DSM
7334]
gi|338835056|gb|AEJ20234.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta caldaria DSM
7334]
Length = 229
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 37/213 (17%)
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
R + VL+S ++S +TKD V ++ RL T E + ++D + + I P GF++TKA+
Sbjct: 45 RPWVVLVSTVISLRTKDAVTLSSSRRLLAKAPTPEALVKLTKDEIAQSIYPAGFYRTKAE 104
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
H+ +D+L Y+ +P+T+E+L LPGVG K A+L ++ G G+D
Sbjct: 105 HLHTIADLLIHQYDGKVPDTLEVLLSLPGVGRKTANLVLSE------GFGQDA------- 151
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
+CVD HVHRI +R GW V K PE+T + L LP
Sbjct: 152 -----------------------ICVDTHVHRICNRTGWV-VTKVPEETEQALRHILPRP 187
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W +N LLV FGQQIC+ Q P C C C
Sbjct: 188 YWRRINWLLVQFGQQICRPQSPLCSQCPLTSFC 220
>gi|319790163|ref|YP_004151796.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
gi|317114665|gb|ADU97155.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
Length = 219
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 118/246 (47%), Gaps = 45/246 (18%)
Query: 113 VLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL 172
++ +RE +K PV + + + +L++ +LS +TKDEV A RL
Sbjct: 10 IVEILREAKKEWAVPVVTLMGQMGTD--------PFKILVATVLSLRTKDEVTAEAARRL 61
Query: 173 KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKL 232
+ T E + SE+ + LI PVGF+ KAK++K + IL ++Y +P+ +E L KL
Sbjct: 62 FQVADTPEKLLKLSEEEIASLIYPVGFYNRKAKNLKEIARILVEHYGGQVPSDLEELLKL 121
Query: 233 PGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVD 292
PGVG K A+L + + K P +CVD
Sbjct: 122 PGVGRKTANLVVTQGF------------------------------------KKPGICVD 145
Query: 293 VHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
HVHRI +RLG+ K KTPE+T L LP+ W E+N LLV GQ IC+ P C C
Sbjct: 146 THVHRIMNRLGFVKT-KTPEETEFALREKLPKEFWIEINDLLVALGQHICRPISPKCSQC 204
Query: 353 LNKDLC 358
+ LC
Sbjct: 205 PIEHLC 210
>gi|397569794|gb|EJK46969.1| hypothetical protein THAOC_34338 [Thalassiosira oceanica]
Length = 385
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 141/301 (46%), Gaps = 65/301 (21%)
Query: 91 KDPIPDENDTKKTKWEPAH-------WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP 143
K P ++ K+ K EP W+++ N + E+RK APVD G +
Sbjct: 120 KPPAATKSPRKRPKIEPGSLPPPEEGWEDIYNLVEELRKDRTAPVDHDGAEQLPEKTKGE 179
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG--LTIENICNTSEDVLGKLIIPVGFWK 201
+V R+ VL++LMLSSQTKD V M +L++ G LT+ENI + L +L+ VGF
Sbjct: 180 KVFRFQVLVALMLSSQTKDAVVGMTMRKLQQAGAGLTVENIHSMDPQTLNELLHSVGFHN 239
Query: 202 TKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQ 261
K IK A++ L + Y DIP T + + +L GVGPKMA++ A+
Sbjct: 240 NKTVFIKAAAETLIEKYQGDIPPTADEMMELKGVGPKMAYIVEQIAF------------- 286
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESW 321
VH+H+ ++L W KTPE TR +LE W
Sbjct: 287 -------------------------------VHMHKNFNKLNWVNS-KTPEQTRVQLEGW 314
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCE---TCLNKDLCPQGKKELAER----VKKSPK 374
LP WS+VN L VGFGQ++ + + TC N P G +L +R VKK K
Sbjct: 315 LPREKWSDVNVLWVGFGQEVQQQKGKLLRKIMTCSN----PLGAMKLVKRLGFDVKKEAK 370
Query: 375 K 375
K
Sbjct: 371 K 371
>gi|289548443|ref|YP_003473431.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
gi|289182060|gb|ADC89304.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
Length = 219
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 124/258 (48%), Gaps = 45/258 (17%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
E H +V++ +RE K +APV ++ + + + VL+ +LS++TKDEV
Sbjct: 2 EKEHVPQVISILREEFKKWNAPVVSLIAQKTGD--------PFRVLVCALLSTRTKDEVT 53
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
+L +I+++ N E+ L LI PVGF++ KAK +K ++ LKK + +P+
Sbjct: 54 AQVCSKLFSRIRSIDDLINIPEEELASLIYPVGFYRNKAKFLKRLAEELKKEFAGKVPDR 113
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
IE L KL GVG K+A+L + G K
Sbjct: 114 IEDLLKLKGVGRKVANLVL------ADGFNK----------------------------- 138
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
P +CVD HVHRI++R K KTP T K L LP W E N LLV FGQ IC+
Sbjct: 139 -PAICVDTHVHRITNRWSLVKT-KTPYQTEKALMEVLPIEYWQEFNRLLVAFGQTICRPV 196
Query: 346 RPSCETCLNKDLCPQGKK 363
+P C C +D C KK
Sbjct: 197 KPLCHKCPIRDYCDFFKK 214
>gi|294944113|ref|XP_002784093.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
gi|239897127|gb|EER15889.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
Length = 292
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 113/222 (50%), Gaps = 41/222 (18%)
Query: 131 MGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH-----GLTIENICNT 185
MG + + E R + +LI++MLSSQTKD+ N AM L H GLT N+
Sbjct: 1 MGCHMLTDPEATEEDRCFQLLIAVMLSSQTKDQENAKAMHNLHSHFKGNGGLTRANLAGM 60
Query: 186 SEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMN 245
E L I VGF TK +++ ++ILK+ +N +P+++E L LPGVGPKMA L M
Sbjct: 61 DEKDLDAQIRGVGFHNTKTRNLIKVANILKEQFNGKVPDSMEDLLSLPGVGPKMAVLVME 120
Query: 246 HAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT 305
G + +CVD HVHRI+ LGWT
Sbjct: 121 IGHG----------------------------------HRDAGICVDTHVHRIAAMLGWT 146
Query: 306 KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRP 347
K KTPE TR++LE+ LP +W ++N LLVG GQ + QRP
Sbjct: 147 KNAKTPEATRQQLEARLPLEVWPDMNLLLVGLGQMV--QQRP 186
>gi|219848317|ref|YP_002462750.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
gi|219542576|gb|ACL24314.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
Length = 220
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 119/249 (47%), Gaps = 47/249 (18%)
Query: 113 VLNNI-REMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
VL+ + RE+ K+ +D MG V P + +LI+ +LS +TKD + R
Sbjct: 11 VLDTLERELTKYTPPLIDQMG-----EVSQTP----FRILIATILSLRTKDTLTAVVAPR 61
Query: 172 LKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCK 231
L T + D + +LI PVGF++ KA+ I IL + YN ++P+ ++ L K
Sbjct: 62 LFAVADTPAAMLALGVDRIAELIYPVGFYRVKARQIAAICQILLEKYNGEVPSDLDELLK 121
Query: 232 LPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCV 291
LPGVG K A+L + +G+ P +CV
Sbjct: 122 LPGVGRKTANLVITAGFGL------------------------------------PGICV 145
Query: 292 DVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCET 351
DVHVHRI +R G+ + +TPE+T L + LP+ W +N LLV GQ IC P C
Sbjct: 146 DVHVHRICNRWGYVQT-RTPEETEMALRAKLPQRYWIPINRLLVTLGQNICHPTSPRCSI 204
Query: 352 CLNKDLCPQ 360
C +DLCP+
Sbjct: 205 CPIRDLCPR 213
>gi|302340587|ref|YP_003805793.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
gi|301637772|gb|ADK83199.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
Length = 224
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 120/256 (46%), Gaps = 50/256 (19%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR-YHVLISLMLSSQTKDEVNHAA 168
W ++ NIR + G APV ++ +A EVR Y VL+S ++S +TKD V +
Sbjct: 15 WNLLIENIR--KATGRAPVPSV-------TAVADEVRDPYRVLVSTIISLRTKDAVTLES 65
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
RL + + ++ + + KLI P GF++ KA +K + LK+ +P +
Sbjct: 66 SRRLFQEAPDLGSLAAMDTEQIAKLIYPAGFYRVKAAQLKTIAMKLKET---GVPAERDR 122
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L LPGVG K A+L + A+GI P
Sbjct: 123 LLALPGVGRKTANLVLGLAFGI------------------------------------PA 146
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
+CVDVHVHRIS+RLG TPE + LE+ LP W E+N L V FGQ +CK P
Sbjct: 147 ICVDVHVHRISNRLGLITT-TTPEKSEMALEAILPRRYWIEINTLFVAFGQTLCKPVSPL 205
Query: 349 CETCLNKDLCPQGKKE 364
C C D+CPQ E
Sbjct: 206 CSRCPLADVCPQNGVE 221
>gi|296109836|ref|YP_003616785.1| DNA-(apurinic or apyrimidinic site) lyase [methanocaldococcus
infernus ME]
gi|295434650|gb|ADG13821.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
infernus ME]
Length = 343
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 131/254 (51%), Gaps = 52/254 (20%)
Query: 112 EVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGR 171
E++ ++E R GDA V +IA E + VL+S ++S++TKDEV +
Sbjct: 2 EIIERLKE-RIKGDAVV----------TEIAKERDPFKVLVSTIISARTKDEVTEEVSKK 50
Query: 172 LKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCK 231
L E ++++ E L L+ P GF+K KA+ +K + +LK+ YN ++P+ ++ L
Sbjct: 51 LFEKVKDVDDLLKIDEKELESLLYPAGFYKNKARTLKKLAKVLKEKYNGEVPSNMDELLS 110
Query: 232 LPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCV 291
LPGVG K A L ++ A+ KDE +CV
Sbjct: 111 LPGVGVKTASLVLSLAF------NKDE------------------------------ICV 134
Query: 292 DVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCET 351
D HVHRIS+R W +TPE++R+EL+ LP+ W +N+LLV FG+ IC +P C+
Sbjct: 135 DTHVHRISNR--WFIDTETPEESREELKKVLPKKYWKSINNLLVLFGRSIC-GPKPKCDK 191
Query: 352 CLN--KDLCPQGKK 363
C K+LCP KK
Sbjct: 192 CYEEIKELCPYYKK 205
>gi|85000285|ref|XP_954861.1| endonuclease III [Theileria annulata strain Ankara]
gi|65303007|emb|CAI75385.1| endonuclease III, putative [Theileria annulata]
Length = 377
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 39/218 (17%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
++ +V N I R APVD G A+ E + L+ MLSSQTKDE+ A
Sbjct: 197 NFTKVWNGIATKRNKEIAPVDLYGCHCVAD---PGENFEFQTLVGCMLSSQTKDEITAAT 253
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
M LK+ GLT++NI E+ L +I VGF KTKAK+IK + ILK+ Y +P+ +
Sbjct: 254 MKNLKKRGLTLDNIIKMDEEELDSIISKVGFHKTKAKNIKKVAQILKEQYGGKVPSNKKE 313
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L LPG+GPKMA+L + A+ +V G+
Sbjct: 314 LESLPGIGPKMANLILQVAYNMVDGVA--------------------------------- 340
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD+HVHRI++RLGW K KTPE+T +L+ LP+ L
Sbjct: 341 --VDIHVHRITNRLGWVKT-KTPEETSLKLQELLPKYL 375
>gi|452944081|ref|YP_007500246.1| DNA-(apurinic or apyrimidinic site) lyase, MutY [Hydrogenobaculum
sp. HO]
gi|452882499|gb|AGG15203.1| DNA-(apurinic or apyrimidinic site) lyase, MutY [Hydrogenobaculum
sp. HO]
Length = 224
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+ +LS++TKDE RL +IE++ N E+ L +LI VGF+ TKAK++
Sbjct: 36 FRVLVCAILSTRTKDETTAKVCERLFVKVKSIEDLYNIKEEELKELIYGVGFYNTKAKNL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + I+ ++Y++ IP E L +LPGVG K+A+L + +GI
Sbjct: 96 KELAKIIVQSYDSKIPKEKEKLMELPGVGLKVANLVLAEGFGI----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVDVHVHRI++R K KTPE T + L++ LP+ W
Sbjct: 139 -------------------PAICVDVHVHRITNRWCLVKT-KTPEQTEEALKNILPKKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N LV FGQ+ICK +P CE C + C
Sbjct: 179 IDINRYLVSFGQRICKPTKPLCEICPIERFC 209
>gi|237756607|ref|ZP_04585124.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691238|gb|EEP60329.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 215
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS +LS +TKD+ A RL + T E I SE + +LI PVGF++ KAK I
Sbjct: 36 FKILISTILSLRTKDQTTAQASDRLFKVADTPEKILKLSEKEIEELIYPVGFYRNKAKII 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL + +N+ +P+ +E L GVG K A+L ++ G GK
Sbjct: 96 KEISKILVEKFNSKVPDDLETLLSFKGVGRKTANLVLSE------GFGK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVDVHVHRIS+R+G K K PE+T +L LP+ W
Sbjct: 139 -------------------PAICVDVHVHRISNRIGLVKT-KNPEETEFKLMEILPKKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
++N + V FGQ ICK +P C C C KK
Sbjct: 179 KDINFVFVAFGQTICKPVKPKCNQCPIIKYCEYDKK 214
>gi|407042592|gb|EKE41422.1| endonuclease III, putative [Entamoeba nuttalli P19]
Length = 241
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 128/270 (47%), Gaps = 45/270 (16%)
Query: 97 ENDTKKTKWEPAHWKEVLNNIREMRKHGDA------PVDAMGWDHSANVDIAPEVRRYHV 150
EN T KT +P E + ++ K+ D V G D ++ + + ++
Sbjct: 2 ENKTTKT-IQPNVIHERVTTFHQIIKYLDTVDIKQMGVQEYGADQILSMCHNKDNKPFYA 60
Query: 151 LISLMLSSQTKDEVNHAAMGRLKE--HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
I LS QT+D++ A++ +L E L+++ I NTS +VL I VGF+ TKAK +K
Sbjct: 61 FIGTFLSPQTRDQITFASVKKLHETLGELSVDVINNTSLEVLINCIKGVGFYTTKAKRLK 120
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
I+K+ YNN +P T + L LPGVGPK+A L + IG D
Sbjct: 121 RCCVIMKEQYNNQVPQTKQQLLALPGVGPKIASL--------ILSIGFD----------- 161
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
++ L +D HV IS RLGW TPE R +LESWLP+ WS
Sbjct: 162 ----------------RLESLAIDTHVFVISQRLGWADG-STPEKVRLQLESWLPKEEWS 204
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
N LV FGQ C+ P C+ C +D C
Sbjct: 205 LFNKSLVAFGQCCCRKTHPKCKQCPIQDKC 234
>gi|325969884|ref|YP_004246075.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta globus
str. Buddy]
gi|324025122|gb|ADY11881.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta globus
str. Buddy]
Length = 220
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI+ ++S +TKDEV A RL + + +E+ + K I P GF+KTKAK+I
Sbjct: 38 YKVLIATLISLRTKDEVTLIASERLFRLAKDPYAMVSLAEEAIQKAIYPAGFYKTKAKNI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++ S+IL YN ++P+T L LPGVG K A+L +N +
Sbjct: 98 RLISEILISRYNANVPDTQAELLTLPGVGIKTANLTLNLGY------------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+I +CVD HVH+I++RLGW + KTPE T + L+ +P W
Sbjct: 139 -----------------QIDAICVDCHVHQIANRLGWVET-KTPEQTEQALQLVMPRRFW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV +GQ IC P C C + CP+
Sbjct: 181 IPLNELLVRYGQLICTPVSPFCSKCPEVERCPK 213
>gi|323310267|gb|EGA63457.1| Ntg1p [Saccharomyces cerevisiae FostersO]
Length = 314
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 118/247 (47%), Gaps = 58/247 (23%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIA-----------PEVRRYHVLISLM 155
P ++E +R +R APVD +G S V +A P R VL+ +M
Sbjct: 93 PYKFQETYARMRVLRSKILAPVDIIG-GSSIPVTVASKCGISKEQISPRDYRLQVLLGVM 151
Query: 156 LSSQTKDEVNHAAMGRL---------KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
LSSQTKDEV AM + E G+T+E + +E L +LI VGF KAK+
Sbjct: 152 LSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAKY 211
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL+ +++D+P TI L LPGVGPKMA+L + AWG + GI
Sbjct: 212 ILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGI------------ 259
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLPE 324
CVDVHV R++ W KTP+ TR +L++WLP+
Sbjct: 260 -----------------------CVDVHVDRLTKLWKWVDXQKCKTPDQTRTQLQNWLPK 296
Query: 325 SLWSEVN 331
LW+E+N
Sbjct: 297 GLWTEIN 303
>gi|167375600|ref|XP_001733691.1| endonuclease III [Entamoeba dispar SAW760]
gi|165905090|gb|EDR30183.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 241
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 108/213 (50%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKE--HGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
++ I LS QT+D++ A++ +L E LTI+ I NTS +VL I VGF+ TKAK
Sbjct: 58 FYAFIGTFLSPQTRDQITFASVKKLHETLGELTIDVINNTSLEVLINCIKGVGFYTTKAK 117
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+K I+K+ +NN +P T + L LPGVGPK+A L + IG D
Sbjct: 118 RLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASL--------ILSIGFD-------- 161
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ L +D H+ ISHRLGW TPE R +LESWLP+
Sbjct: 162 -------------------RLESLAIDTHIFVISHRLGWADG-STPEKVRLQLESWLPKE 201
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
WS N +V FGQ C+ P C+ C +D C
Sbjct: 202 EWSLFNKSIVAFGQCCCRKIHPKCKQCPIQDKC 234
>gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
Length = 490
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 103/213 (48%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL++ +LS++T+DE A RL ++ + SE+ L KLI PVGF++ KA ++
Sbjct: 39 YKVLVATILSARTRDETTAGAAARLFARAPDLDTLARLSEEELAKLIRPVGFFRAKAGYL 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
L + IP T+E L +LPGVG K A+L + A+
Sbjct: 99 ARLPAALTAKFRGKIPATVEELVQLPGVGRKTANLVVAVAF------------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ P +CVD HVHRI + G+ TPE T K L + LP+ W
Sbjct: 140 -----------------ERPAICVDTHVHRIMNIWGYVNT-TTPEATEKALRAKLPQPYW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV FGQ+IC+ P C+ C LCP+
Sbjct: 182 RRINSLLVAFGQEICRPVGPHCDRCPLAQLCPR 214
>gi|452209864|ref|YP_007489978.1| Endonuclease III [Methanosarcina mazei Tuc01]
gi|452099766|gb|AGF96706.1| Endonuclease III [Methanosarcina mazei Tuc01]
Length = 205
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 108/213 (50%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LIS ++S +T+D+V + A +L E T E + + + +LI VGF++ KA I
Sbjct: 26 FFALISTVMSHRTRDDVTYPAAKKLFERFSTPEEMVEADVEDIEELIRDVGFYRVKAGRI 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL ++YN +P+ +E L KLPGVG K A+ + HA+
Sbjct: 86 KEISRILLEDYNGRVPDDMETLLKLPGVGRKTANCVLAHAF------------------- 126
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K L VD HVHRIS+RLG V K PE+T EL+ LP+ W
Sbjct: 127 ----------------LKEDALAVDTHVHRISNRLGLV-VTKNPEETEMELKKLLPQKYW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV FGQ +C+ P C C+ D+CP+
Sbjct: 170 RHVNILLVKFGQNVCRPISPRCGICVLNDICPK 202
>gi|21227382|ref|NP_633304.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905743|gb|AAM30976.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 205
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LIS ++S +T+D+V + A +L E T E + + + + +LI VGF++ KA I
Sbjct: 26 FFALISTVMSHRTRDDVTYPAAKKLFERFSTPEEMVEANVEDIEELIRDVGFYRVKAGRI 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL ++YN +P+ +E L KLPGVG K A+ + HA+
Sbjct: 86 KEISRILLEDYNGKVPDDMETLLKLPGVGRKTANCVLAHAF------------------- 126
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K L VD HVHRIS+RLG V K PE+T EL+ LP+ W
Sbjct: 127 ----------------LKEDALAVDTHVHRISNRLGRV-VTKNPEETEMELKKLLPQKYW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV FGQ +C+ P C C+ D+CP+
Sbjct: 170 RHVNILLVKFGQNVCRPISPRCGICILNDICPK 202
>gi|15605819|ref|NP_213196.1| endonuclease III [Aquifex aeolicus VF5]
gi|2982981|gb|AAC06594.1| endonuclease III [Aquifex aeolicus VF5]
Length = 213
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+ +LS++TKDE+ R E + E++ SE + +LI PVGF++ KAK +
Sbjct: 36 FRVLVCALLSTRTKDELTWRVCKRFFEKVKSPEDLIKLSEKEIEELIYPVGFYRVKAKQL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K IL + Y +P+T+E L KLPGVG K+A+L ++ G K
Sbjct: 96 KEIGKILIEKYGGKVPDTLEELLKLPGVGRKVANLVLSK------GFNK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VDVHVHRI +R K KTPE+T ++L +P+ LW
Sbjct: 139 -------------------PAIVVDVHVHRIVNRWCLVKT-KTPEETERKLMEIVPKELW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S++N+LLV FGQ IC ++P CE C + C
Sbjct: 179 SDINYLLVAFGQTICLPRKPKCEECPVEKYC 209
>gi|406879151|gb|EKD27842.1| hypothetical protein ACD_79C00539G0001, partial [uncultured
bacterium]
Length = 212
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 45/250 (18%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
+ ++LN +R+ + +PV A+ + +L+S MLS++TKDEV +
Sbjct: 6 FIKILNILRKEAGNWKSPVIEFMASQGAD--------PFRILVSTMLSARTKDEVTLKSS 57
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
L T E + + +LI PVGF+KTKA+H+K + +L +N+ +P+ I+ L
Sbjct: 58 NNLFTRIHTPEELIKLKTADIARLIYPVGFYKTKARHLKQLAAVLINKFNSLVPSNIDDL 117
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
+PGVG K A+L ++ A+ IP +
Sbjct: 118 LMIPGVGRKTANLVLSRAFD------------------------------------IPAI 141
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
CVD HV RI +RL T V PE+T K+L +PE+ W ++N +LV FGQ +CK P C
Sbjct: 142 CVDTHVFRICNRLEVT-VSSKPEETEKQLMKKIPENYWQDINTILVAFGQMVCKPVSPHC 200
Query: 350 ETCLNKDLCP 359
+ C LCP
Sbjct: 201 KECKVSRLCP 210
>gi|20093393|ref|NP_619468.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918762|gb|AAM07948.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 216
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS ++S +T+D+V + A +L E T E + + + LI VGF++ K+ I
Sbjct: 38 FFVLISTVMSHRTRDDVTYPAARKLFERFSTPEEMVGADVEEIEALIKDVGFYRVKSGRI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL + Y+ ++P+ +E L KLPGVG K A+ + HA+ KD
Sbjct: 98 KEISGILLEEYDGEVPDDMETLLKLPGVGRKTANCVLAHAFL------KD---------- 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRIS+RLG + KTPE+T EL+ P+ W
Sbjct: 142 --------------------ALAVDTHVHRISNRLGLVET-KTPEETELELKKIFPQKYW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV GQ IC+ P CE C+ D+CP+
Sbjct: 181 KHINLLLVKLGQNICRPISPKCEVCVLNDMCPK 213
>gi|336121854|ref|YP_004576629.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
gi|334856375|gb|AEH06851.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
Length = 397
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 40/222 (18%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
E+R + VLIS +LS++TKDE RL + I+++ ++ L K I PVGF+KTK
Sbjct: 75 EIRAFKVLISTVLSARTKDETTSEVSKRLFKRIKNIDDLVTINQSELEKHIYPVGFYKTK 134
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
AKH+K + I+K +YN IPN +E L KLPGVG K A+L + A+ D+
Sbjct: 135 AKHLKELAKIVKNDYNGKIPNRLEDLIKLPGVGRKTANLVITLAF--------DDY---- 182
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
+CVD HVHRI +R + + P +T EL LP
Sbjct: 183 ------------------------GICVDTHVHRICNRWEYVDT-ENPNETEAELRKKLP 217
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
+ W +N+LLV +G+++C S P C+ C + K++CP KK
Sbjct: 218 KKYWKIINNLLVVYGREVC-SPIPKCDKCFDEIKEICPYYKK 258
>gi|163781957|ref|ZP_02176957.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159883177|gb|EDP76681.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 213
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 45/246 (18%)
Query: 113 VLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL 172
V+ ++E + +APV + H+ + + VLI +LS++T+DE +
Sbjct: 9 VIEILKEHYERWEAPVVTLVAQHTHD--------PFKVLICALLSTRTRDETTAKVCEKF 60
Query: 173 KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKL 232
+ + E+I L +LI PVGF++ KAK +K ++IL +++ ++P T E L +L
Sbjct: 61 FKKVKSPEDILKLPLKELEELIYPVGFYRNKAKQLKKLAEILIRDFGGEVPKTREELLRL 120
Query: 233 PGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVD 292
PGVG K+A+L + + I P +CVD
Sbjct: 121 PGVGRKVANLVLADGYSI------------------------------------PAICVD 144
Query: 293 VHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
HVHRI++R K +TPE+T K+L LPE W +N LLV FGQ+IC QRP C C
Sbjct: 145 THVHRITNRWCLVKT-RTPEETEKKLMEVLPEEYWIVINRLLVAFGQRICTPQRPRCGEC 203
Query: 353 LNKDLC 358
++ C
Sbjct: 204 PIENFC 209
>gi|189208093|ref|XP_001940380.1| DNA base excision repair N-glycosylase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976473|gb|EDU43099.1| DNA base excision repair N-glycosylase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 345
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNH 166
PA+W+E+ REMR APVD MG + A P +R+ LI+LMLSSQTKD V
Sbjct: 132 PANWEEMYALTREMRNENVAPVDTMGCESLAERQRTPRDQRFQTLIALMLSSQTKDTVLA 191
Query: 167 AAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
M ++E G +E++ L I VGF K K+IK ++IL+ +N+DIP
Sbjct: 192 PVMRNMQEKMPGGFNLESVLALEPPALNAFINKVGFHNLKTKYIKQTAEILRDKWNSDIP 251
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWG 249
++IE L LPGVGPKM +LC++ AWG
Sbjct: 252 DSIEGLVSLPGVGPKMGYLCLSAAWG 277
>gi|291288305|ref|YP_003505121.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
gi|290885465|gb|ADD69165.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
Length = 219
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 108/227 (47%), Gaps = 39/227 (17%)
Query: 134 DHSANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLG 191
D + I+ + RR + VLIS ++S +TKDEV AA RL T E + D +
Sbjct: 21 DEPSVTKISKQTRRDPFRVLISCLISLRTKDEVTLAASNRLFAKADTPEKMLTIPADEIA 80
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
KLI P GF+KTK+ I IL Y+ +P+ I+ L KL GVG K A+L +V
Sbjct: 81 KLIYPAGFYKTKSNTITNICRILLDEYDGKVPDEIDELLKLKGVGRKTANLV------VV 134
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTP 311
G G+D +CVD HVHRI +RLG+ KTP
Sbjct: 135 EGYGRD------------------------------AICVDTHVHRIFNRLGYVAT-KTP 163
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ T EL LP W +N +LV +G++IC P C C D+C
Sbjct: 164 DKTEMELRKHLPIKYWIRINEILVSYGREICTPVSPHCSYCRLSDIC 210
>gi|67479287|ref|XP_655025.1| endonuclease III [Entamoeba histolytica HM-1:IMSS]
gi|56472130|gb|EAL49639.1| endonuclease III, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707262|gb|EMD46954.1| endonuclease III, putative [Entamoeba histolytica KU27]
Length = 241
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 126/270 (46%), Gaps = 45/270 (16%)
Query: 97 ENDTKKTKWEPAHWKEVLNNIREMRKHGD-APVDAMGWDHSANVDIAPEV-----RRYHV 150
EN T KT +P E + + ++ K+ D + MG I + ++
Sbjct: 2 ENKTTKT-IQPNVIHERVTTLHQIIKYLDTVDIKQMGVQEYGAEQILSMCHNKDNKPFYA 60
Query: 151 LISLMLSSQTKDEVNHAAMGRLKE--HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
I LS QT+D++ A++ +L E L+++ I NTS +VL I VGF+ TKAK +K
Sbjct: 61 FIGTFLSPQTRDQITFASVKKLHETLGELSVDVINNTSLEVLINCIKGVGFYTTKAKRLK 120
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
I+K+ YNN +P T + L LPGVGPK+A L + IG D
Sbjct: 121 HCCVIMKEQYNNQVPQTKQQLLTLPGVGPKIASL--------ILSIGFD----------- 161
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
++ L +D HV IS RLGW TPE R +LESWLP+ W
Sbjct: 162 ----------------RLESLAIDTHVFVISQRLGWADG-STPEKVRLQLESWLPKEEWP 204
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
N LV FGQ C+ P C+ C +D C
Sbjct: 205 LFNKSLVAFGQCCCRKTHPKCKQCPIQDKC 234
>gi|325294609|ref|YP_004281123.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065057|gb|ADY73064.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 218
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 104/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS +TKDE+ A +L + ++ E+ + LI PVGF++ KAK+I
Sbjct: 36 FKILIATVLSLRTKDEITAKAANKLFQVADNPYDMLKLKEEEIASLIYPVGFYRRKAKNI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K +L + YN +P+ I+ L KLPGVG K A+L + G GK
Sbjct: 96 KEICKVLIEKYNGKVPDEIDELLKLPGVGRKTANLV------VTLGYGK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRIS+RLG+ KTPE+T L LP+ W
Sbjct: 139 -------------------PGICVDTHVHRISNRLGYVNT-KTPEETEFALREKLPKDYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E+N LLV GQ IC P C C + C
Sbjct: 179 IEINDLLVSLGQHICHPTSPKCSQCPIEKYC 209
>gi|443924844|gb|ELU43797.1| DNA-(apurinic or apyrimidinic site) lyase [Rhizoctonia solani AG-1
IA]
Length = 340
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 94/148 (63%), Gaps = 5/148 (3%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAP-EVRRYHVLISLMLSSQTKDEVN 165
P +W++ + I +MR DAPVD MG S + P + +R+ L+SLMLSSQTKDEV
Sbjct: 148 PPNWEKQYSLIEDMRSRIDAPVDTMGCAKSMT-GVGPLKDQRFGALVSLMLSSQTKDEVT 206
Query: 166 HAAMGRLKE---HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
AA+ L++ GLT+++I ++ I VGFW+ K ++I+ A+ IL+ Y++D+
Sbjct: 207 AAAVENLRQVLPGGLTVDSILAAEPSIISNAIGKVGFWRRKTEYIRAAAQILRDKYDSDV 266
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGI 250
P T++ LC LPGVGPKMA L + AW +
Sbjct: 267 PKTVDELCALPGVGPKMAFLVLQVAWDM 294
>gi|333999302|ref|YP_004531914.1| endonuclease III protein [Treponema primitia ZAS-2]
gi|333738187|gb|AEF83677.1| endonuclease III protein [Treponema primitia ZAS-2]
Length = 263
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 128/275 (46%), Gaps = 63/275 (22%)
Query: 110 WKEVLNNIREMRKH---GDAPVDAMGWDHSANVD---------------------IAPEV 145
W ++ + + RK G+ PV+++G +H+A +A
Sbjct: 17 WDAIVKALEKWRKDAQLGELPVESVGREHTAGTSGAKPGKGRQTAPAQGDPSVTTVAERY 76
Query: 146 RR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
RR + VL S +LS +TKDEV + L E T E + + + + KLI PVGF+ TK
Sbjct: 77 RRNPWAVLASTILSLRTKDEVTLSRSQALLEKAPTPEALLGLTTEKIEKLIYPVGFYHTK 136
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
A++++ + IL ++Y +P +ELL LPGVG K A+L + A+
Sbjct: 137 AQNLQKIAAILMESYKGQVPADMELLLALPGVGRKTANLVLTEAF--------------- 181
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
+ +CVDVHVHRIS+RLG + K PE T L LP
Sbjct: 182 ---------------------DMDGICVDVHVHRISNRLGVLE-SKNPEGTEMILREILP 219
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ W +N LLV +GQ++C+ P C C+ LC
Sbjct: 220 KKYWKRINILLVLYGQRVCRPISPFCSRCVMPGLC 254
>gi|13541635|ref|NP_111323.1| endonuclease III [Thermoplasma volcanium GSS1]
gi|14325034|dbj|BAB59960.1| endonuclease III [Thermoplasma volcanium GSS1]
Length = 215
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS +TKDE A L E TIE + + +G +I VGFW+ KAK I
Sbjct: 31 FWMLITTVLSQRTKDETTDQAALALYERYRTIEGLASADVSDVGSIISKVGFWRVKAKKI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
M + I++ Y + +P +++ L LPGVG K A + + GI
Sbjct: 91 IMIAQIIRDEYGSKVPASMDQLLSLPGVGVKTASVVLAEGLGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RISHR+GW+ KTPE T ++L +P+ LW
Sbjct: 134 -------------------PMIAVDTHVFRISHRIGWSSS-KTPEQTAQDLMQIIPKDLW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LV FG+ +C+ P C C + C KK+
Sbjct: 174 IGFNPTLVEFGKAVCRPVSPKCSMCRINEFCEYYKKK 210
>gi|403215722|emb|CCK70221.1| hypothetical protein KNAG_0D04820 [Kazachstania naganishii CBS
8797]
Length = 443
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 98/212 (46%), Gaps = 46/212 (21%)
Query: 141 IAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLG 191
I P+ R VL+ +MLSSQTKDE+ AM + H G+T+ + E L
Sbjct: 158 IEPKTYRVQVLVGVMLSSQTKDEMTAKAMYNVMRHCIDSVGSVQGITVPALLQIDERTLD 217
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
LI VGF + K+ +I IL+ +Y DIP T L LPGVGPKM +L + AWG +
Sbjct: 218 SLISCVGFHQRKSNYILRTCQILEDSYGGDIPETAHELQALPGVGPKMTYLTLQKAWGKM 277
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FK 309
GI CVDVHV R W K
Sbjct: 278 DGI-----------------------------------CVDVHVDRFCKLFKWVDPNRCK 302
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
TP+ TR L+ WLP LWSE+N LLVG GQ I
Sbjct: 303 TPDMTRIALQEWLPLPLWSEINSLLVGMGQLI 334
>gi|406993461|gb|EKE12589.1| Endonuclease III [uncultured bacterium]
Length = 199
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 104/203 (51%), Gaps = 38/203 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y LIS ++S++TKD+ A RL I+ + S + + KLI PVGF+KTKA+HI
Sbjct: 27 YKTLISTLMSARTKDDTTLLAARRLFAKAGNIKMLNKMSVNDIEKLIYPVGFYKTKARHI 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K+ ++ + K +N +IP T + L LPGVG K A+L +N A+
Sbjct: 87 KLLAETVIKKFNGEIPKTQKELTTLPGVGVKTANLVLNRAFS------------------ 128
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HVHRIS+ LGW KTPE T KEL +P+ W
Sbjct: 129 ------------------IPAIAVDTHVHRISNLLGWVHT-KTPEQTEKELVRRVPKKYW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCE 350
SE+N L V G+Q SQ+ E
Sbjct: 170 SEMNRLFVSVGRQFT-SQKKLVE 191
>gi|294496431|ref|YP_003542924.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
gi|292667430|gb|ADE37279.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
Length = 206
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 108/216 (50%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+++LIS +LS +T+DEV A RL + T + + + LI VGF++ KA I
Sbjct: 26 FYILISTVLSQRTRDEVTEVASRRLFDQYSTPVQMVEADVEKIEILIKDVGFYRVKAGRI 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL Y++ +P ++ L KLPGVG K A+ +++A+
Sbjct: 86 KEISQILIDEYDSQVPASMVELLKLPGVGRKTANCVLSYAF------------------- 126
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK I VD HVHRIS+RLG TP+ T EL+ +P S W
Sbjct: 127 --------------LEKAI---AVDTHVHRISNRLGLVDTV-TPDQTEIELQKQVPVSYW 168
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
EVN L V FG+ +CK P+CE C +DLC + +K
Sbjct: 169 REVNELFVQFGKTVCKPLSPACEVCAIEDLCAKKEK 204
>gi|374628503|ref|ZP_09700888.1| endonuclease III [Methanoplanus limicola DSM 2279]
gi|373906616|gb|EHQ34720.1| endonuclease III [Methanoplanus limicola DSM 2279]
Length = 217
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 112/211 (53%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS+QT D ++ GRL E ++ + + ++I P GF++ K+K+I
Sbjct: 33 FQILIMTILSAQTTDRTVNSVKGRLFEAYPDPHSMADAEISKIEEIIRPTGFYRAKSKNI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ AS++L + Y+ +P+++E L KLPGVG K A++ +NHA+GI GI
Sbjct: 93 RGASEMLVREYDGVVPDSMEELIKLPGVGRKTANIVLNHAYGIDAGIA------------ 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S+RLG T P+ ++L + P+ +W
Sbjct: 141 -----------------------VDTHVKRVSYRLGMTDN-TDPDKIERDLTALYPQEVW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N LL+ G+ +C +++P+CE C KD C
Sbjct: 177 GKMNFLLISHGRAVCDAKKPACERCCIKDYC 207
>gi|393906282|gb|EJD74237.1| hypothetical protein LOAG_18420 [Loa loa]
Length = 204
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 110/249 (44%), Gaps = 93/249 (37%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
WK+ L NI++MR + DAPVD+ M
Sbjct: 40 WKKHLENIKQMRSNWDAPVDS--------------------------------------M 61
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
G C+ D L + K KA +IK + ILK+ Y+ DIPNTIE L
Sbjct: 62 G------------CHMLADALAEP-------KKKALYIKKVAKILKERYDGDIPNTIEEL 102
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
C LPGVG KMA+L M +AW + G+G
Sbjct: 103 CSLPGVGEKMAYLAMCNAWDQMKGLG---------------------------------- 128
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HVHRIS+RLGW K P+++R LE+ +P W E+N LLVGFGQQ C P C
Sbjct: 129 -VDTHVHRISNRLGWIKT-SNPKESRIALEALVPREEWQELNKLLVGFGQQTCLPVLPKC 186
Query: 350 ETCLNKDLC 358
CLN+++C
Sbjct: 187 SECLNRNIC 195
>gi|328943407|ref|ZP_08240872.1| endonuclease III [Atopobium vaginae DSM 15829]
gi|327491376|gb|EGF23150.1| endonuclease III [Atopobium vaginae DSM 15829]
Length = 220
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 36/216 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I +MLS+QT D + +L T +++ + +G++I +GFW+ KAKH
Sbjct: 37 FTLTICVMLSAQTTDAAVNKVTPQLFARWPTAKHMAQAKPEDIGEVIRTIGFWRAKAKHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS ++ ++ ++P T+E L +LPGVG K A++ +N A+ GI
Sbjct: 97 VEASQMIMSDFAGEVPQTMEELMRLPGVGRKTANIVLNKAFNKTQGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV RIS RL +T+ KTP + ++L LP +LW
Sbjct: 145 -----------------------VDTHVFRISTRLQFTRA-KTPLEAEQDLLKLLPPTLW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
S VN + FG++ICK++ P CETC+ + LCP K
Sbjct: 181 SSVNEEWIHFGREICKAKNPCCETCIARALCPSYAK 216
>gi|94263508|ref|ZP_01287320.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456146|gb|EAT06289.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L++ +LSS+T+DE A RL + ++ E L +LI PVGF++ KA ++
Sbjct: 39 YRILVATILSSRTRDETTAGAAERLFVRAPDLASLARLGEKELARLIHPVGFYRAKAGYL 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL + IP T+E L +LPGVG K A+L + A+
Sbjct: 99 ARLPGILAAKFGGQIPATVEELIQLPGVGRKTANLVVAVAF------------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ P +CVD HVHRI + G+ + TPE T K L + LP W
Sbjct: 140 -----------------EQPAICVDTHVHRIMNIWGYVRT-ATPEATEKALRAKLPLVHW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV FGQ+IC+ C+ C DLCP+
Sbjct: 182 RRINSLLVAFGQEICRPVGAHCDRCPLADLCPR 214
>gi|148269689|ref|YP_001244149.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170288365|ref|YP_001738603.1| endonuclease III [Thermotoga sp. RQ2]
gi|281411600|ref|YP_003345679.1| endonuclease III [Thermotoga naphthophila RKU-10]
gi|147735233|gb|ABQ46573.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170175868|gb|ACB08920.1| endonuclease III [Thermotoga sp. RQ2]
gi|281372703|gb|ADA66265.1| endonuclease III [Thermotoga naphthophila RKU-10]
Length = 213
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 41/228 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +T+DE A +L E T + + + L LI G ++ KA I
Sbjct: 23 FRVLISTVLSQRTRDENTEKASKKLFEVYRTPQELAKAKPEDLYNLIKESGMYRQKAARI 82
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + Y +P+++E L KLPGVG K A++ + W
Sbjct: 83 VEISRILVERYGGRVPDSLEELLKLPGVGRKTANIVL---W------------------- 120
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ RK P L VD HVHRIS+RLGW K +TPE+T + L+ LPE LW
Sbjct: 121 ---------VGFRK-----PALAVDTHVHRISNRLGWVKT-RTPEETEEALKKLLPEDLW 165
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP----QGKKELAERVKK 371
+N +V FG++ICK Q P CE C K+ C +GK E+ R ++
Sbjct: 166 GPINGSMVEFGRRICKPQNPLCEECFLKNHCEFYRRRGKGEVRNRTER 213
>gi|15643134|ref|NP_228177.1| endonuclease III [Thermotoga maritima MSB8]
gi|403252815|ref|ZP_10919120.1| endonuclease III [Thermotoga sp. EMP]
gi|418046300|ref|ZP_12684394.1| endonuclease III [Thermotoga maritima MSB8]
gi|8134433|sp|Q9WYK0.1|END3_THEMA RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|4980869|gb|AAD35453.1|AE001716_16 endonuclease III [Thermotoga maritima MSB8]
gi|351675853|gb|EHA59013.1| endonuclease III [Thermotoga maritima MSB8]
gi|402811577|gb|EJX26061.1| endonuclease III [Thermotoga sp. EMP]
Length = 213
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 114/228 (50%), Gaps = 41/228 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +T+DE A +L E T + + + L LI G ++ KA+ I
Sbjct: 23 FRVLISTVLSQRTRDENTEKASKKLFEVYRTPQELAKAKPEDLYDLIKESGMYRQKAERI 82
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + Y +P+++E L KLPGVG K A++ + W G K
Sbjct: 83 VEISRILVEKYGGRVPDSLEELLKLPGVGRKTANIVL---W---VGFKK----------- 125
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HVHRIS+RLGW K +TPE+T + L+ LPE LW
Sbjct: 126 -------------------PALAVDTHVHRISNRLGWVKT-RTPEETEEALKKLLPEDLW 165
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP----QGKKELAERVKK 371
+N +V FG++ICK Q P CE C K+ C +GK E+ R ++
Sbjct: 166 GPINGSMVEFGRRICKPQNPLCEECFLKNHCEFYRRRGKGEVRNRTER 213
>gi|402589187|gb|EJW83119.1| hypothetical protein WUBG_05972, partial [Wuchereria bancrofti]
Length = 130
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 85/156 (54%), Gaps = 36/156 (23%)
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
KA +IK ++ILK+ Y+ DIPNT+E LC LPGVG KMA+L M AW + G+G
Sbjct: 2 KAVYIKKVAEILKERYDGDIPNTVEGLCSLPGVGEKMAYLAMCTAWDQLEGLG------- 54
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VD HVHRIS+RLGW K P+++R LE+ +
Sbjct: 55 ----------------------------VDTHVHRISNRLGWIKT-SNPKESRVALEALV 85
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
P W E+N LLVGFGQQ C P C CLNK++C
Sbjct: 86 PREQWQELNKLLVGFGQQTCLPVLPKCSECLNKNIC 121
>gi|94263146|ref|ZP_01286964.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456517|gb|EAT06631.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L++ +LSS+T+DE A RL + ++ E L +LI PVGF++ KA ++
Sbjct: 39 YRILVATILSSRTRDETTAGAAERLFVRAPDLASLARLGEKELARLIHPVGFYRAKAGYL 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L + IP T+E L +LPGVG K A+L + A+
Sbjct: 99 ARLPGVLAAKFGGQIPATVEELIQLPGVGRKTANLVVAVAF------------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ P +CVD HVHRI + G+ + TPE T K L + LP W
Sbjct: 140 -----------------EQPAICVDTHVHRIMNIWGYVRT-ATPEATEKALRAKLPLVHW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV FGQ+IC+ C+ C DLCP+
Sbjct: 182 RRINSLLVAFGQEICRPVGAHCDRCPLADLCPR 214
>gi|163846363|ref|YP_001634407.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222524128|ref|YP_002568599.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
gi|163667652|gb|ABY34018.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222448007|gb|ACM52273.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
Length = 220
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 47/251 (18%)
Query: 111 KEVLNNI-REMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAM 169
++VL+ + RE+ + +D MG V P + +LI+ +LS +TKD +
Sbjct: 9 EQVLDTLERELAVYTPPLIDQMG-----EVSQTP----FRILIATILSLRTKDTLTAVVA 59
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
RL T + + + +LI PVGF++ KA+ I IL + YN ++P ++ L
Sbjct: 60 PRLFAVADTPAAMVALGAERIAELIYPVGFYRVKAQQIVHICQILLERYNGEVPADLDEL 119
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
KLPGVG K A+L + +G+ P +
Sbjct: 120 LKLPGVGRKTANLVVTAGFGL------------------------------------PGI 143
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
CVD+HVHRI +R G+ + +TPE+T L + LP+ W +N LLV GQ IC P C
Sbjct: 144 CVDIHVHRICNRWGYVQT-RTPEETEMALRARLPQRYWIPINRLLVTLGQNICHPTSPRC 202
Query: 350 ETCLNKDLCPQ 360
C +++CP+
Sbjct: 203 SICPIREVCPR 213
>gi|302422168|ref|XP_003008914.1| DNA base excision repair N-glycosylase [Verticillium albo-atrum
VaMs.102]
gi|261352060|gb|EEY14488.1| DNA base excision repair N-glycosylase [Verticillium albo-atrum
VaMs.102]
Length = 317
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 98/202 (48%), Gaps = 57/202 (28%)
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEH----------GLTIENICNTSEDVLGKLII 195
RR+ +LISLM+SSQTKD VN AMGRL + GL +ENI L +LI
Sbjct: 103 RRFQILISLMMSSQTKDTVNAVAMGRLHDELPPHEAGAPPGLNLENILAVEPAKLNELI- 161
Query: 196 PVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIG 255
++ A +L+ N++ DIP TI+ L LPGVGPKMAHLC++ AWG GIG
Sbjct: 162 ----------RVQEAL-LLRDNFDADIPPTIDGLTSLPGVGPKMAHLCLSAAWGRTEGIG 210
Query: 256 KDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTR 315
VDVHVHRI++ G + + P
Sbjct: 211 -----------------------------------VDVHVHRITNMWGVAQRQRAPRPRA 235
Query: 316 KELESWLPESLWSEVNHLLVGF 337
LE+WLP W E+N LLVG
Sbjct: 236 SPLEAWLPRDRWHEINTLLVGL 257
>gi|298675584|ref|YP_003727334.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
gi|298288572|gb|ADI74538.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
Length = 203
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
++VLI+ +LS +T+D V +++ L + + +T ED + LI VGF++ K + I
Sbjct: 26 FYVLITTVLSQRTRDSVTNSSAKTLFNKYNSPNELVHTDEDEIESLIKNVGFYRVKTQRI 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S+++ Y+ +P+ + L KLPGVG K A+ + +A+ S
Sbjct: 86 KQISEMILDEYDGQVPDNLNDLLKLPGVGRKTANCVLTYAF------------------S 127
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ I+ VD HVHRIS+RLG + KTPE T K+L+ +PE+LW
Sbjct: 128 KKAIA------------------VDTHVHRISNRLGLVET-KTPEKTEKDLKKIVPENLW 168
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+++N L V FGQ C+ P C+ C+ D CP+
Sbjct: 169 NKINELFVRFGQNTCRPVSPRCDVCVLNDTCPK 201
>gi|222099270|ref|YP_002533838.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
gi|221571660|gb|ACM22472.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
Length = 208
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 108/216 (50%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +T+DE A +L E T E++ + L LI G ++ KA+ I
Sbjct: 23 FRVLISTVLSQRTRDENTERAARKLFEVYRTPEDLAKAKPEDLYDLIKESGMYRQKAERI 82
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + Y+ +P+T+E L +LPGVG K A++ + W
Sbjct: 83 VKISKIIVEKYSGKVPDTLEELLRLPGVGRKTANIVL---W------------------- 120
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ RK P L VD HVHRIS+RLGW K KTPE+T K L+ LPE LW
Sbjct: 121 ---------VGFRK-----PALAVDTHVHRISNRLGWVKT-KTPEETEKALKRLLPEKLW 165
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+N +V FG+ +C+ P CE C K C +K
Sbjct: 166 GPINGSMVEFGRNVCRPVNPKCEDCFLKKHCEYYRK 201
>gi|159904747|ref|YP_001548409.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
gi|159886240|gb|ABX01177.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
Length = 356
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 46/238 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + + N R + +L+S ++S++TKDE L + + +++
Sbjct: 22 DAVVDKISKNSNENE------RAFKILVSTVISARTKDETTAKVSKELFKKVKSPKDLSE 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
S + L KL+ P GF+KTKAK++K +IL + Y++ IPN+IE L KLPGVG K A+L M
Sbjct: 76 ISVEELEKLVHPAGFYKTKAKNLKKLGEILLEKYDSKIPNSIEELIKLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ DE +CVD HVHRI++R +
Sbjct: 136 TLAF--------DEY----------------------------AICVDTHVHRITNRWNY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQ 360
+ PE+T EL LP+ W +N+LLV FGQ+IC S P C+ C + +++CP
Sbjct: 160 VDT-EFPENTEMELRKKLPKDYWKRINNLLVVFGQEIC-SPIPKCDKCFSEIREICPH 215
>gi|333910096|ref|YP_004483829.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris igneus Kol
5]
gi|333750685|gb|AEF95764.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris igneus Kol
5]
Length = 344
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 122/231 (52%), Gaps = 40/231 (17%)
Query: 135 HSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI 194
++ +IA E + VLIS +LS++TKDEV RL E ++++ + L KLI
Sbjct: 14 NAVVTEIAKEKSPFKVLISTILSARTKDEVTEEVSKRLFEKVKNVDDLLKIDLEELEKLI 73
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
PVGF++ KAK++K + ILK+NYN +PN ++ L KLPGVG K A+L + A+
Sbjct: 74 YPVGFYRMKAKNLKKLAKILKENYNGKVPNELDELLKLPGVGRKTANLVITLAF------ 127
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
D+ +CVD HVHRI +R G+ + + PE+T
Sbjct: 128 --DDY----------------------------GICVDTHVHRICNRWGYVET-ENPEET 156
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
EL LP+ W +N+LLV FG++IC S P CE C ++ CP KK
Sbjct: 157 EMELRKKLPKKYWKIINNLLVVFGREIC-SPTPKCEECFEEIRERCPYYKK 206
>gi|312073211|ref|XP_003139418.1| hypothetical protein LOAG_03833 [Loa loa]
Length = 130
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 85/156 (54%), Gaps = 36/156 (23%)
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
KA +IK + ILK+ Y+ DIPNTIE LC LPGVG KMA+L M +AW + G+G
Sbjct: 2 KALYIKKVAKILKERYDGDIPNTIEELCSLPGVGEKMAYLAMCNAWDQMKGLG------- 54
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VD HVHRIS+RLGW K P+++R LE+ +
Sbjct: 55 ----------------------------VDTHVHRISNRLGWIKT-SNPKESRIALEALV 85
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
P W E+N LLVGFGQQ C P C CLN+++C
Sbjct: 86 PREEWQELNKLLVGFGQQTCLPVLPKCSECLNRNIC 121
>gi|384208101|ref|YP_005593821.1| endonuclease III [Brachyspira intermedia PWS/A]
gi|343385751|gb|AEM21241.1| endonuclease III [Brachyspira intermedia PWS/A]
Length = 233
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E +++ SE+ + KLI PVGF+K KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDMLKLSEEEIAKLIYPVGFYKVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ ++N +P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSQMIIDDFNGQVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVHT-KTPEETEFALRDKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LV +GQ +CK P C C C K E
Sbjct: 180 RVYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFKNE 216
>gi|374316259|ref|YP_005062687.1| putative endoIII-related endonuclease [Sphaerochaeta pleomorpha
str. Grapes]
gi|359351903|gb|AEV29677.1| putative endoIII-related endonuclease [Sphaerochaeta pleomorpha
str. Grapes]
Length = 220
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S ++S +TKDEV A +L T + + + + I P GF+KTKAK++
Sbjct: 38 FRVLVSTLISLRTKDEVTLQASRKLFSLADTPHAMLLLGQKAIEEAIYPAGFYKTKAKNL 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S+IL+ YN +P++ E L +LPGVG K A+L +N +G
Sbjct: 98 LAISEILEMTYNGKVPSSSEKLLQLPGVGIKTANLTLNLGFG------------------ 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
I +CVD HVH+I++R+GW KTPE T + L++ +P+ W
Sbjct: 140 ------------------IEAICVDCHVHQIANRMGWVAT-KTPEQTEQALQTVMPKRFW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV +GQ IC S P C C C
Sbjct: 181 IPLNELLVVYGQYICTSVSPWCSKCSETATC 211
>gi|336476216|ref|YP_004615357.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosalsum zhilinae
DSM 4017]
gi|335929597|gb|AEH60138.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosalsum zhilinae
DSM 4017]
Length = 203
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
++VLIS +LS +T+DE+ + A RL + + + + + +LI VGF++ K++ +
Sbjct: 26 FYVLISTVLSHRTRDEITYRASSRLMDKFRSAQEMAEAEVSEIEELIKDVGFYRVKSRRV 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++IL Y ++P+ ELL +LPGVG K A+ + +A+ S++ I
Sbjct: 86 KEIAEILMYRYGGEVPDNCELLLELPGVGRKTANCVLLYAF----------SKETI---- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHRIS+RLG K TP++T ++L+ LP S W
Sbjct: 132 ----------------------AVDTHVHRISNRLGLVKS-STPDETEEKLKKILPRSSW 168
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
++N L V FGQ IC+ P C+ C+ ++CP
Sbjct: 169 KDINELFVQFGQNICRPVSPKCDICVLCNICP 200
>gi|145524629|ref|XP_001448142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415675|emb|CAK80745.1| unnamed protein product [Paramecium tetraurelia]
Length = 278
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 122/255 (47%), Gaps = 42/255 (16%)
Query: 104 KWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE 163
K E + K + I++MR +APVD +G + D E +R+ +L SLMLS QTKD+
Sbjct: 55 KQENSGTKNIYEIIKQMRLERNAPVDLVGPQKCFDQDKDIETQRFQILTSLMLSPQTKDD 114
Query: 164 VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
V RL E+ TI +I N E L KLI V F TKAK IK D+ + +P
Sbjct: 115 VTSKCANRLLEY--TINDIANMDEPDLIKLIYEVNFNVTKAKRIK---DLAQLAIYKGMP 169
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
T E K+ GVG K+A L + A+ V GI PI
Sbjct: 170 KTFEETIKIKGVGEKIALLYIQVAFQRVEGI-------PI-------------------- 202
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
DV++ RI +R+ K K+P RK LES W E+N LVGFGQQIC
Sbjct: 203 --------DVNMIRICNRVPIFKE-KSPTKLRKFLESQFEHKEWGEINETLVGFGQQICL 253
Query: 344 SQRPSCETCLNKDLC 358
+P C+ C KD+C
Sbjct: 254 P-KPKCDQCKLKDIC 267
>gi|312136836|ref|YP_004004173.1| endonuclease iii ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
gi|311224555|gb|ADP77411.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
Length = 209
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +TKDE A +L TIE I N E L KLI VGF++ KAK I
Sbjct: 28 YKVLIETILSQRTKDENTKKASKKLFSKYDTIEKIANAQEKDLEKLIKCVGFYRVKAKRI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL Y+ +P ++ L KLPGVG K A+ + + +
Sbjct: 88 KKISKILINKYDGKVPKNLKELLKLPGVGRKTANCVLVYGFN------------------ 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
E IP VD HVHR+++R+G KTPE+T K L +P W
Sbjct: 130 ---------------EDAIP---VDTHVHRVANRIGLVNT-KTPEETEKTLRKIIPRDYW 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
EVN L V FG+ ICK P E C K C
Sbjct: 171 KEVNKLFVEFGKNICKPTNPKHEKCPIKKFC 201
>gi|150401058|ref|YP_001324824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
gi|150013761|gb|ABR56212.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
Length = 357
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 40/222 (18%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
E+ + VLIS +LS++TKDE RL + I+++ N + L +LI PVGF+KTK
Sbjct: 33 EILAFKVLISTVLSARTKDETTDEVSKRLYKKVKNIDDLINIDIEELQELIYPVGFYKTK 92
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
AKH+K + ++K NYN IPN I L KLPGVG K A+L + A+ D+
Sbjct: 93 AKHLKELALMVKNNYNGKIPNDINELVKLPGVGRKTANLVITLAF--------DDY---- 140
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
+CVD HVHRIS+R + +PE T EL LP
Sbjct: 141 ------------------------GICVDTHVHRISNRWNFVNT-PSPEKTEMELRKKLP 175
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
+ W +N+ LV +G+++C + P C C+ K+ CP K
Sbjct: 176 KKYWKTINNSLVVYGREVC-APIPKCSKCIQEIKETCPYYDK 216
>gi|406994421|gb|EKE13413.1| hypothetical protein ACD_13C00021G0015 [uncultured bacterium]
Length = 199
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 104/209 (49%), Gaps = 39/209 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y L+S +LS++TKD V A RL + +E + + +GKLI PVGF+KTKAKH+
Sbjct: 27 YKTLVSTLLSARTKDGVTLEASKRLFKIAPNLEKLNQLEINEIGKLIYPVGFYKTKAKHL 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + I+ +Y +P T + L LPGVG K A+L +N A+G
Sbjct: 87 KTLARIVLTSYGGKVPKTQKELNTLPGVGIKTANLVLNRAFG------------------ 128
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HVHRIS+ LGW KTPE T KEL +P+ W
Sbjct: 129 ------------------VPAIAVDTHVHRISNLLGWVHT-KTPEQTEKELIKVVPKKYW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKD 356
++N L V G+Q +R E L K+
Sbjct: 170 PDMNRLFVSIGRQFTSKKR--LEEFLRKE 196
>gi|340623929|ref|YP_004742382.1| endonuclease III-like protein [Methanococcus maripaludis X1]
gi|339904197|gb|AEK19639.1| endonuclease III-like protein [Methanococcus maripaludis X1]
Length = 356
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 118/238 (49%), Gaps = 46/238 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + N R + +LIS ++S++TKDE L + +++
Sbjct: 22 DAVVDKISKNSDKNE------RAFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQ 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
D L KL+ P GF+KTKAK++K +IL YN+DIPN+IE L LPGVG K A+L M
Sbjct: 76 IPIDELEKLVHPAGFYKTKAKNLKKLGEILIDKYNSDIPNSIEDLVTLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ +CVD HVHRI++R +
Sbjct: 136 TLAFDDYA------------------------------------ICVDTHVHRITNRWDY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQ 360
++PE+T EL LP++ W ++N+LLV FGQ+ C S P C+ C + K +CP
Sbjct: 160 ADT-ESPENTEMELRKKLPKNYWKKINNLLVVFGQETC-SPIPKCDRCFSEIKKICPH 215
>gi|85860567|ref|YP_462769.1| endonuclease III N [Syntrophus aciditrophicus SB]
gi|85723658|gb|ABC78601.1| endonuclease III N [Syntrophus aciditrophicus SB]
Length = 206
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 129 DAMGWDHSANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTS 186
D+ G V E RR + +LIS +LS +TKDEV A RL T E + S
Sbjct: 15 DSAGAAEFPIVTQLAETRRDPFLILISTVLSLRTKDEVTATATERLFSLASTPETMLELS 74
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
E+ + + I PVGF++ K++ I+ L + +++ +P+++E L L GVG K A+L ++
Sbjct: 75 EEEIRQAIYPVGFYRNKSRQIREICRDLIERFSSRVPDSLEDLLSLKGVGQKTANLVLS- 133
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
G KD +CVD HVHRIS+RLG
Sbjct: 134 -----LGFEKD------------------------------AICVDTHVHRISNRLGLVS 158
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
KTPE T L++ LP WS N LLV FGQ++C+ P C +C
Sbjct: 159 T-KTPEQTESALQNVLPRRYWSRYNTLLVSFGQRVCRPLSPLCSSC 203
>gi|150403470|ref|YP_001330764.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
gi|150034500|gb|ABR66613.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
Length = 356
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 46/238 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + + N R + +L+S ++S++TKDE L + + +++ +
Sbjct: 22 DAVVDKISKNSNENE------RAFKILVSTVISARTKDETTAKVSKALFKKVKSPKDLSD 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
S + L KL+ P GF+KTKAK++K IL + Y++ IPN+IE L LPGVG K A+L M
Sbjct: 76 ISLEELEKLVHPAGFYKTKAKNLKKLGKILLEEYDSKIPNSIEELVTLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ +CVD HVHRI++R +
Sbjct: 136 TLAFDDYA------------------------------------ICVDTHVHRITNRWNY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQ 360
+ PEDT EL LP++ W +N+LLV FGQ+IC S P C+ C + +++CP
Sbjct: 160 VNT-EFPEDTEMELRKKLPKNYWKRINNLLVVFGQEIC-SPIPKCDKCFSEIREICPH 215
>gi|406893678|gb|EKD38677.1| hypothetical protein ACD_75C00647G0002 [uncultured bacterium]
Length = 500
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDE AA RL E +E++ E + +LI PVGF KTKAKH+
Sbjct: 35 FKVLVATILSARTKDETTAAASTRLFEVAPDLESLARLPEAEIARLIYPVGFSKTKAKHL 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + L +++ +P TIE L LPGVG K A+L
Sbjct: 95 ALLPEAL-RSFGGKVPETIEELITLPGVGRKTANL------------------------- 128
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VR + P +CVD HVHRI + + + TP T L + LPE W
Sbjct: 129 -----------VRTVAFRKPAICVDTHVHRIMNIWEYVRT-DTPLKTEMALRAKLPEEHW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV FGQ IC+ P C+ C CPQ
Sbjct: 177 LSVNSLLVAFGQSICRPVGPKCDICPLLPECPQ 209
>gi|148656645|ref|YP_001276850.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
gi|148568755|gb|ABQ90900.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
Length = 219
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 119 EMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLT 178
EM + +D MG + + N + +LI+ +LS +TKD + RL T
Sbjct: 16 EMPRFPKPLIDGMGEEEARN--------PFRILIATILSLRTKDTMTAVVAPRLFAAADT 67
Query: 179 IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPK 238
E + ED + LI PVGF++ KA+ I+ IL Y ++P ++ L LPGVG K
Sbjct: 68 PEKMLALGEDEIAALIYPVGFYRNKARTIRTICQILIDQYGGEVPADLDALLALPGVGRK 127
Query: 239 MAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRI 298
A+L + + +P +CVD HVHRI
Sbjct: 128 TANLVLTAGF------------------------------------DLPGICVDTHVHRI 151
Query: 299 SHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+R G+ + +TPE+T L LP W E+N LLV GQ IC P C C LC
Sbjct: 152 CNRWGYVQT-RTPEETEMRLREILPPEYWKEINGLLVTLGQNICHPTSPRCSVCPLAHLC 210
>gi|154249096|ref|YP_001409921.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
gi|154153032|gb|ABS60264.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
Length = 221
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI+ +LS +++DE A +L E +E+I N + L +LI P G ++ KA+ I
Sbjct: 37 YKVLITTILSQRSRDENTEVASKQLFEKYPNVESIANAKPEELYELIKPAGLYREKAERI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S IL + Y+ +PN +E L +LPGVG K A+ IV + D++
Sbjct: 97 IIVSKILLEKYDGVVPNKLEELLELPGVGRKTAN--------IVLHVSFDQA-------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRIS+RLGW K KTPE T +EL+ + LW
Sbjct: 141 --------------------ALAVDTHVHRISNRLGWVKT-KTPEQTEEELKKIMSPQLW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N +V FG+ ICK P CE C + C
Sbjct: 180 GPINGSMVEFGKNICKPISPRCEQCFLTECC 210
>gi|134046103|ref|YP_001097589.1| hypothetical protein MmarC5_1071 [Methanococcus maripaludis C5]
gi|132663728|gb|ABO35374.1| protein of unknown function DUF123 [Methanococcus maripaludis C5]
Length = 356
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 118/238 (49%), Gaps = 46/238 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + N R + +L+S ++S++TKDE L + T + +
Sbjct: 22 DAVVDKISKNSDENE------RAFKILVSTVISARTKDETTAKVSKELFKKVKTPKELSE 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
S D L KL+ P GF+KTKAK++K IL + Y++ IPN+IE L LPGVG K A+L M
Sbjct: 76 ISLDNLEKLVHPAGFYKTKAKNLKKLGKILLEEYDSKIPNSIEELITLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ DE +CVD HVHRI++R +
Sbjct: 136 TLAF--------DEY----------------------------AICVDTHVHRITNRWNY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQ 360
+ PE+T EL LP+ W +N+LLV FGQ+IC S P C+ C + + +CP
Sbjct: 160 VDT-EFPENTEMELRKKLPKDYWKRINNLLVVFGQEIC-SPIPKCDKCFSEIRKICPH 215
>gi|16082555|ref|NP_394252.1| endonuclease III [Thermoplasma acidophilum DSM 1728]
Length = 217
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 41/227 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS +TKDE A L E I+ + + D +G++I VGFW+ K++ +
Sbjct: 32 FWMLITTVLSQRTKDETTDEAARSLYEKYRDIDGLADADPDEVGRIISKVGFWRVKSRKV 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I++ YN +P++I+ L LPGVG K A + + +
Sbjct: 92 VEIARIIRDRYNYRVPDSIDELVSLPGVGLKTAKVVLAEGFNR----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RISHR+GW+ +TPE+T +ELE +P L
Sbjct: 135 -------------------PAIAVDTHVFRISHRIGWSSA-RTPEETSEELERIIPVDLQ 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
N ++V FG+ IC+ RP C+ C + C + E+VK S K
Sbjct: 175 VGFNPMMVEFGKAICRPVRPLCDRCPVSEYC----RYYEEKVKDSEK 217
>gi|225620166|ref|YP_002721423.1| endonuclease III [Brachyspira hyodysenteriae WA1]
gi|225214985|gb|ACN83719.1| endonuclease III [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E +++ SE+ + KLI PVGF+K KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDMLKLSEEEIAKLIYPVGFYKVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ ++ +P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSQMIIDDFKGQVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVNT-KTPEETEFALRDKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LV +GQ +CK P C C C K E
Sbjct: 180 RVYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFKNE 216
>gi|300870285|ref|YP_003785156.1| endonuclease III [Brachyspira pilosicoli 95/1000]
gi|300687984|gb|ADK30655.1| endonuclease III, putative [Brachyspira pilosicoli 95/1000]
Length = 217
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E + + + +E+ + KLI PVGF+ KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGSAKEMIKLTEEEIAKLIYPVGFYNVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ +YN ++P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSHMIIDDYNGEVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVHT-KTPEETEFALREKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
N LV +GQ +CK P C C C K
Sbjct: 180 RVYNDTLVVYGQNLCKPISPLCSECTVSQYCDYFK 214
>gi|440292608|gb|ELP85795.1| endonuclease III, putative [Entamoeba invadens IP1]
Length = 236
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 106/230 (46%), Gaps = 38/230 (16%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG--LTIENI 182
D PV++MG + A + + ++ + LS QT DE A+ L LT E I
Sbjct: 26 DIPVNSMGAEAIAGMTQNASNKPFYTFLGTFLSPQTHDEKTFEAVKTLHTTFGELTPEII 85
Query: 183 CNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHL 242
+TS + L K I VGF KTK+K +K I + Y+ +P+T + LC LPGVG K+A L
Sbjct: 86 NHTSLETLQKCIKMVGFAKTKSKRLKECCKIFIEKYDGKVPSTFDELCALPGVGTKIASL 145
Query: 243 CMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRL 302
+ A+ C IP VD HV IS+RL
Sbjct: 146 ILAIAFD--------------------------------CHVAIP---VDTHVFTISNRL 170
Query: 303 GWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
W TPE TR +LE WLP+ WS N +LV FGQ C + P C C
Sbjct: 171 EWADA-TTPESTRIQLEEWLPKDKWSTFNKVLVSFGQCCCTKKSPKCSEC 219
>gi|10640069|emb|CAC11921.1| endonuclease III related protein [Thermoplasma acidophilum]
Length = 197
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 41/227 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS +TKDE A L E I+ + + D +G++I VGFW+ K++ +
Sbjct: 12 FWMLITTVLSQRTKDETTDEAARSLYEKYRDIDGLADADPDEVGRIISKVGFWRVKSRKV 71
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I++ YN +P++I+ L LPGVG K A + + +
Sbjct: 72 VEIARIIRDRYNYRVPDSIDELVSLPGVGLKTAKVVLAEGFNR----------------- 114
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RISHR+GW+ +TPE+T +ELE +P L
Sbjct: 115 -------------------PAIAVDTHVFRISHRIGWSSA-RTPEETSEELERIIPVDLQ 154
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
N ++V FG+ IC+ RP C+ C + C + E+VK S K
Sbjct: 155 VGFNPMMVEFGKAICRPVRPLCDRCPVSEYC----RYYEEKVKDSEK 197
>gi|11499282|ref|NP_070520.1| endonuclease III [Archaeoglobus fulgidus DSM 4304]
gi|2648861|gb|AAB89556.1| endonuclease III (nth) [Archaeoglobus fulgidus DSM 4304]
Length = 209
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 39/213 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L++ +LSS+T+DE A L E++ SE+ + +LI VGF++ KAK +
Sbjct: 32 FQHLVAALLSSRTRDEATVRAAQNLFAKVKKPEDLLKLSEEEIAELIKGVGFYRVKAKRL 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L ++Y++++P + E L KLPG+G K A++ + ++
Sbjct: 92 KELAKKLVEDYSSEVPLSFEELVKLPGIGRKSANVVLAYS-------------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HVHRI++RLGW + K PE+T + L+ P W
Sbjct: 132 -----------------DIPAIPVDTHVHRIANRLGWARTTK-PEETEEVLKRLFPLEFW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+VN +VGFGQ +CK Q+P C+ C K CP+
Sbjct: 174 EKVNRAMVGFGQTVCKPQKPLCDECPIKG-CPR 205
>gi|218960389|ref|YP_001740164.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans]
gi|167729046|emb|CAO79957.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 222
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDE + +L IE++ L LI PVGF + KAKH+
Sbjct: 44 FKVLVATILSARTKDETTAKVVEKLFPKVQKIEDLEKIPLAELDALITPVGFHRVKAKHL 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K +LK+ +N IP I+ L +LPGVG K A+L
Sbjct: 104 KELPKVLKEKFNGKIPEEIDDLLELPGVGRKTANL------------------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VR + P +CVDVHVHRI +R G+ + KTP +T L LPE W
Sbjct: 139 -----------VRAVAFQKPAICVDVHVHRICNRWGYIQT-KTPLETEMTLRQKLPEKYW 186
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
N LV FGQ +C ++P CE C + C
Sbjct: 187 LNFNSYLVAFGQNLCTPRKPKCEICPVAEFC 217
>gi|429123460|ref|ZP_19183993.1| endonuclease III [Brachyspira hampsonii 30446]
gi|426280734|gb|EKV57744.1| endonuclease III [Brachyspira hampsonii 30446]
Length = 233
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E +++ +E+ + KLI PVGF+K KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDMLKLTEEEIEKLIYPVGFYKVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ +YN +P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSKMIIDDYNGQVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVHT-KTPEETEFALRDKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
N LV +GQ +CK P C+ C C K
Sbjct: 180 RIYNDTLVVYGQNLCKPISPLCQKCTVSQYCDYFK 214
>gi|404476670|ref|YP_006708101.1| endonuclease III [Brachyspira pilosicoli B2904]
gi|431808877|ref|YP_007235775.1| endonuclease III [Brachyspira pilosicoli P43/6/78]
gi|434382739|ref|YP_006704522.1| endonuclease III [Brachyspira pilosicoli WesB]
gi|404431388|emb|CCG57434.1| endonuclease III [Brachyspira pilosicoli WesB]
gi|404438159|gb|AFR71353.1| endonuclease III [Brachyspira pilosicoli B2904]
gi|430782236|gb|AGA67520.1| endonuclease III [Brachyspira pilosicoli P43/6/78]
Length = 217
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E + + +E+ + KLI PVGF+ KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNAKEMIKLTEEEIAKLIYPVGFYNVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ +YN ++P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSHMIIDDYNGEVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVHT-KTPEETEFALREKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
N LV +GQ +CK P C C C K
Sbjct: 180 RVYNDTLVVYGQNLCKPISPLCSECTVSQYCDYFK 214
>gi|225850162|ref|YP_002730396.1| endonuclease III (DNA-(apurinic orapyrimidinic site) lyase)
[Persephonella marina EX-H1]
gi|225646537|gb|ACO04723.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Persephonella marina EX-H1]
Length = 219
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 117/251 (46%), Gaps = 48/251 (19%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRR--YHVLISLMLSSQTKDEVNHA 167
+ +VLN ++ DAPV ++ +A +R Y +LIS ++S +TKD+V
Sbjct: 6 FIKVLNILKREFPRWDAPVVSL---------MAKRDKRTPYQILISTIISLRTKDQVTAE 56
Query: 168 AMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIE 227
RL ++ E+ + + I P GF++ KAK IK S + K++ +P++I+
Sbjct: 57 VSERLFRLADNPYDMLKIPEEKIAEAIYPAGFYRNKAKVIKEISGKIVKDFGGKVPDSID 116
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L KL GVG K A+L + G GK P
Sbjct: 117 ELLKLKGVGRKTANLV------VALGYGK------------------------------P 140
Query: 288 QLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRP 347
+CVD HVHRIS+RLG+ K KT E+T L +P W+E+N L V FGQ ICK P
Sbjct: 141 AICVDTHVHRISNRLGFVKT-KTAEETEMALRKKVPREYWNEINDLFVAFGQTICKPVSP 199
Query: 348 SCETCLNKDLC 358
C C C
Sbjct: 200 KCSECPVSSYC 210
>gi|118579102|ref|YP_900352.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
gi|118501812|gb|ABK98294.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
Length = 218
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 139 VDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP 196
V I E R + VL+S ++S +TKDEV AA R+ + E + +ED + LI P
Sbjct: 25 VTIVAECERSPFKVLVSCIISLRTKDEVTAAASARMFARADSAERMLKLAEDEIAALIYP 84
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
GF++TKA I + L + ++P+ +E L + GVG K A+L + G GK
Sbjct: 85 AGFYRTKAGQIHGIAHRLVTEFGGNVPDEMEDLLRFRGVGRKTANLVLT------LGFGK 138
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK 316
P +CVD HVHRI +RLG+ ++PE T
Sbjct: 139 ------------------------------PGICVDTHVHRICNRLGYVST-RSPEQTEM 167
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
L + LP W +N LLV FGQ C P C TC + C +
Sbjct: 168 ALRAQLPGEYWIAINDLLVAFGQNHCHPISPRCTTCRIAEFCSR 211
>gi|374815134|ref|ZP_09718871.1| endonuclease III protein [Treponema primitia ZAS-1]
Length = 231
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 121/254 (47%), Gaps = 45/254 (17%)
Query: 110 WKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYH-----VLISLMLSSQTKDEV 164
W ++ + + RK A D D S + ++ RYH VL S +LS +TKDEV
Sbjct: 9 WDGIVKALEKWRKAAQA--DEAASD-SGDPSVSTVAERYHQDPWAVLASTILSLRTKDEV 65
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPN 224
L + T + + + + + KLI PVGF+ TKA++++ + I+ + Y +P
Sbjct: 66 TLVRSQALLKKAPTPKALLKLTTEEIEKLIYPVGFYHTKAQNLQNIASIIIETYRGQVPA 125
Query: 225 TIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEK 284
++LL LPGVG K A+L + A+ + GI
Sbjct: 126 DMDLLLALPGVGRKTANLVLTEAFDM-DGI------------------------------ 154
Query: 285 KIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKS 344
CVDVHVHRI++RLG + KTPE+T L LP W +N LLV +GQ++C+
Sbjct: 155 -----CVDVHVHRITNRLGALQ-SKTPEETEMILRKILPRKYWKRINKLLVLYGQRVCRP 208
Query: 345 QRPSCETCLNKDLC 358
P C C+ D C
Sbjct: 209 ISPFCSRCVITDRC 222
>gi|147805787|emb|CAN69482.1| hypothetical protein VITISV_017352 [Vitis vinifera]
Length = 377
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 128/303 (42%), Gaps = 87/303 (28%)
Query: 100 TKKTKWEPAHWKEVLNNIREMRKHGDAPVDAMG--------------------------- 132
+K T P E+ ++IR DAPVD+MG
Sbjct: 107 SKPTSDVPPGGTEITSSIRP----PDAPVDSMGCEKAGSSLPPRRLHTLNTAHYKYYQQL 162
Query: 133 ----WDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIEN-ICNTSE 187
W AP VL ++LS+++ A+ RL ++GL + + I E
Sbjct: 163 NTRQWVMGTKAACAPFAYVKKVLAXILLSTRSA-----GAIQRLLQNGLLVADAIDKADE 217
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
+ LI PVGF+ KA ++K + I Y+ DIP+++E L LPG+GPKMAHL MN A
Sbjct: 218 ATIKSLIYPVGFYSRKAANLKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLVMNVA 277
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV 307
W V GI CVD HVHRI +RLGW
Sbjct: 278 WNNVQGI-----------------------------------CVDTHVHRICNRLGWVSR 302
Query: 308 FKT------PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
T PE+TR+ L+ WLP+ W +N LL IC RP C C DLCP
Sbjct: 303 RGTKQKTSSPEETRESLQLWLPKEEWVPINPLLT-----ICTPLRPXCGVCGVSDLCPSA 357
Query: 362 KKE 364
KE
Sbjct: 358 FKE 360
>gi|445061978|ref|ZP_21374435.1| endonuclease III [Brachyspira hampsonii 30599]
gi|444506641|gb|ELV06946.1| endonuclease III [Brachyspira hampsonii 30599]
Length = 229
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E +++ +E+ + KLI PVGF+K KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDMLKLTEEEIEKLIYPVGFYKVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ ++N +P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSKMIIDDFNGQVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVNT-KTPEETEFALRDKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
N LV +GQ +CK P C C C K
Sbjct: 180 RVYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFK 214
>gi|73668473|ref|YP_304488.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395635|gb|AAZ69908.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 204
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 103/213 (48%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LIS ++S +T+D+V + A +L E T E + + LI VGF++ KA I
Sbjct: 26 FFALISTVMSHRTRDDVTYPAASKLFERFSTPEEMVRADVSEIETLIKDVGFYRVKAGRI 85
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S +L + Y +P+ +E L +LPGVG K A+ + HA+ KD
Sbjct: 86 KEISRLLLEKYGGRVPDDMEALLELPGVGRKTANCVLAHAFL------KD---------- 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRIS+RLG + K PE+T EL+ P+ W
Sbjct: 130 --------------------ALAVDTHVHRISNRLGLVET-KVPEETETELKKIFPQKYW 168
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV GQ C+ P C+TC D+CP+
Sbjct: 169 RHVNLLLVKLGQNTCRPISPRCKTCTLDDICPK 201
>gi|330837763|ref|YP_004412404.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta coccoides
DSM 17374]
gi|329749666|gb|AEC03022.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta coccoides
DSM 17374]
Length = 237
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ ++S +TKD V +AA RL T + S++ + I P GF++TKA++I
Sbjct: 55 FRVLIATLISLRTKDAVTYAASRRLFSVANTPRAMLALSQEQIETAIAPAGFFRTKARNI 114
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L + + +P E L LPGVG K A+L +N +GI
Sbjct: 115 LEISKKLVEEHGGLVPPDKEALVSLPGVGTKTANLTLNLGFGI----------------- 157
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVH I++R GW K PE T KELE LP W
Sbjct: 158 -------------------DAICVDCHVHTIANRTGWVST-KNPEQTEKELEKILPRRFW 197
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+N LLV +GQ+IC S P C C CP
Sbjct: 198 IPLNELLVSYGQKICTSVSPRCSICPIASTCP 229
>gi|296125919|ref|YP_003633171.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
gi|296017735|gb|ADG70972.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
Length = 227
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS MLS +TKD A RL E + +++ +E+ + KLI PVGF+K KAK+I
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGSPKDMLKLTEEEIAKLIYPVGFYKVKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S ++ ++ +P+ I+ L KL GVG K+A+L + A+ KD
Sbjct: 97 LEVSKMIIDDFGGKVPDEIDELLKLKGVGRKVANLVVTEAF------DKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRIS+R G+ KTPE+T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRISNRFGYVHT-KTPEETEFALRDKLPKEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
N LV +GQ +CK P C C C K E
Sbjct: 180 RIYNDTLVVYGQNLCKPISPLCSKCTVSQYCDYFKNE 216
>gi|160902834|ref|YP_001568415.1| endonuclease III [Petrotoga mobilis SJ95]
gi|160360478|gb|ABX32092.1| endonuclease III [Petrotoga mobilis SJ95]
Length = 210
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 115/242 (47%), Gaps = 44/242 (18%)
Query: 118 REMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGL 177
R+++K + ++ +S E + VLI +LS +TKDE A L
Sbjct: 3 RDIKKEAEKIINMFPRSNS-------ETDPFKVLIETVLSQRTKDENTEKASKSLFSCYT 55
Query: 178 TIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGP 237
+ I + L LI P G +K K++ I S IL + YN +P+ +E L +LPGVG
Sbjct: 56 NVFEISKLNPQDLYDLIKPAGMYKQKSERIINISKILIEKYNGKVPDELEELIELPGVGR 115
Query: 238 KMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHR 297
K A++ + ++G E+ L VD HVHR
Sbjct: 116 KTANIVLYVSFG-------KEA-----------------------------LAVDTHVHR 139
Query: 298 ISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDL 357
IS+RLGW K KTPE+T ++L+ +P LW +N +V FGQ+ICK P C+ C ++
Sbjct: 140 ISNRLGWVKT-KTPEETEEQLKKIIPSELWGPLNGSMVNFGQKICKPISPKCDECFLNEV 198
Query: 358 CP 359
CP
Sbjct: 199 CP 200
>gi|45358100|ref|NP_987657.1| endonuclease III-like protein [Methanococcus maripaludis S2]
gi|44920857|emb|CAF30093.1| endonuclease III homologue [Methanococcus maripaludis S2]
Length = 356
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 118/238 (49%), Gaps = 46/238 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + N R + +LIS ++S++TKDE L + +++
Sbjct: 22 DAVVDKISKNSDKNE------RAFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQ 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
D L KL+ P GF+KTKAK++K +IL YN+++PN+IE L LPGVG K A+L M
Sbjct: 76 IPIDELEKLVHPAGFYKTKAKNLKKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ +CVD HVHRI++R +
Sbjct: 136 TLAFDDYA------------------------------------ICVDTHVHRITNRWYY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQ 360
++PE+T +L LP++ W ++N+LLV FGQ+ C S P C+ C + K +CP
Sbjct: 160 ADT-ESPENTEMDLRKKLPKNYWKKINNLLVVFGQETC-SPIPKCDKCFSEIKKICPH 215
>gi|392412414|ref|YP_006449021.1| putative endoIII-related endonuclease [Desulfomonile tiedjei DSM
6799]
gi|390625550|gb|AFM26757.1| putative endoIII-related endonuclease [Desulfomonile tiedjei DSM
6799]
Length = 222
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 44/223 (19%)
Query: 136 SANVDIAPEVRR-----YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVL 190
S V I E+ R + VL+S +LS +TKD+V A RL T E + + E+ +
Sbjct: 23 SLAVPIVTEISRKRRDPFDVLVSTVLSLRTKDDVTRVASRRLLAVASTPEALADLPEEEI 82
Query: 191 GKLIIPVGFWKTKAKHIK-MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
KLI PVGF++TKA++++ +A D+L+K Y +P+ ++ L + GVG K A+L + +G
Sbjct: 83 EKLIFPVGFYRTKARNLRQLARDLLQK-YGGKVPDDLDELLTIKGVGRKTANLVITLGFG 141
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
+Q I CVD HVHR+S+RLG+ K
Sbjct: 142 ----------QQGI--------------------------CVDTHVHRVSNRLGYVST-K 164
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
TPE T L + LP W E N LLV +GQ IC+ P C C
Sbjct: 165 TPEQTEMALRAKLPAEYWIEYNDLLVTWGQNICRPISPFCSKC 207
>gi|389580745|ref|ZP_10170772.1| putative endoIII-related endonuclease [Desulfobacter postgatei
2ac9]
gi|389402380|gb|EIM64602.1| putative endoIII-related endonuclease [Desulfobacter postgatei
2ac9]
Length = 223
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 110/228 (48%), Gaps = 42/228 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDEV A RL E E + S + +LI PVGF+K+KA+++
Sbjct: 37 FKVLVATILSARTKDEVTAVAARRLLEKAPDPEALKALSISQIQELIFPVGFYKSKAQYL 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + +P+ I+ L LPGVG K A+L A+ KD
Sbjct: 97 SKLPEALD-AFQGQVPDEIDALVTLPGVGRKTANLVRAVAFD------KDA--------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRI + G+ K KTP DT K L LP+ W
Sbjct: 141 ---------------------ICVDTHVHRIMNIWGYVKT-KTPLDTEKALRKKLPKKFW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
EVN +LV FGQ C+ P C C+ + CPQ + + KSPKK
Sbjct: 179 KEVNRILVTFGQGTCRPVGPHCYRCVLEKHCPQ----IGVKPAKSPKK 222
>gi|406894390|gb|EKD39215.1| hypothetical protein ACD_75C00473G0002 [uncultured bacterium]
Length = 484
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 105/213 (49%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKD+ AA RL + + E + +LI PVGF+KTKAKH+
Sbjct: 35 FKVLVATILSARTKDDTTAAASARLFQVAPDCAALARLEEAQIAELIYPVGFYKTKAKHL 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
M + L ++++ +P+TIE L LPGVG K A+L ++ A+
Sbjct: 95 AMLPEAL-RSFHGMVPDTIEELVTLPGVGRKTANLVVSVAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ P +CVD HVHRI + + + TP T L + LP+ W
Sbjct: 135 -----------------QKPAICVDTHVHRIMNIWEYVET-DTPLKTEMALRAKLPDKHW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV FGQ IC+ P C+ C CPQ
Sbjct: 177 IGVNSLLVAFGQSICRPVSPHCDICPLLTACPQ 209
>gi|150400428|ref|YP_001324195.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
gi|150013131|gb|ABR55583.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
Length = 356
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 114/237 (48%), Gaps = 46/237 (19%)
Query: 125 DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICN 184
DA VD + + + E R + +L+S LS++TKDE L E++ N
Sbjct: 22 DAVVDQISKNSTF------EERAFKILVSTSLSARTKDETTAKVSKNLFRVIQNPEDLLN 75
Query: 185 TSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCM 244
+ L KL+ P GF+KTK+K++K IL + YN+ IPN+I+ L KLPGVG K A+L M
Sbjct: 76 IPINELEKLVYPAGFYKTKSKNLKELGKILVEKYNSKIPNSIDELVKLPGVGRKTANLVM 135
Query: 245 NHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW 304
A+ SE +CVD HVHRI++RL +
Sbjct: 136 TLAF-------------------------SE-----------DAICVDTHVHRITNRLNY 159
Query: 305 TKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCP 359
K P +T L LP+ W ++N+ LV FGQ IC P C +C K +CP
Sbjct: 160 VDT-KNPNETEMALRKKLPKKYWKQINNSLVIFGQDIC-GFVPKCSSCFPEIKKICP 214
>gi|406897553|gb|EKD41478.1| hypothetical protein ACD_73C00702G0003 [uncultured bacterium]
Length = 219
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 103/213 (48%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +TKD+ HAA RL T + I L +LI PV F+KTKAK I
Sbjct: 37 FEVLISTILSLRTKDKTTHAASLRLFARANTPKGILKIPLQELEQLIYPVSFYKTKAKSI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P+ ++ L +LPGVG K A+L V +G D+
Sbjct: 97 HKICDILLEKYKGEVPDHLDDLLELPGVGRKTANL--------VITVGFDDY-------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRI++R G+ K KT ++T L LP+ W
Sbjct: 141 --------------------GICVDTHVHRITNRWGFIKT-KTADETESVLREKLPKKYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
N LLV FGQ +C P C C +CP+
Sbjct: 180 IRYNDLLVAFGQNLCGPVSPYCSLCPLAKMCPK 212
>gi|84489308|ref|YP_447540.1| endonuclease III [Methanosphaera stadtmanae DSM 3091]
gi|84372627|gb|ABC56897.1| putative endonuclease III [Methanosphaera stadtmanae DSM 3091]
Length = 219
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+DE A L T+E I + D + L+ GF+ KA I
Sbjct: 37 YEVLIRTILSQRTRDENTDKATENLFNVYHTMEEIADAPVDDIANLVRQAGFYNVKAARI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S+IL + Y+ +P+T+E L KLPGVG K A+ C+ +V G KD
Sbjct: 97 KEVSNILLEEYDGVVPDTLEELLKLPGVGRKTAN-CV-----LVFGFQKD---------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VDVHVHRIS+RLG K PEDT + L +P+ W
Sbjct: 141 -----------------AIP---VDVHVHRISNRLGLVHTDK-PEDTEEVLREIVPQEYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+N L+V FGQ ICK P C DLC K EL
Sbjct: 180 LPINDLMVQFGQNICKPINPQHIECPFTDLCQLYKSEL 217
>gi|308161443|gb|EFO63889.1| Endonuclease III [Giardia lamblia P15]
Length = 323
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 89/185 (48%), Gaps = 43/185 (23%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT +N+ ++ D LG++I PVGF + KA+++K + I NY DIP + + KLPG G
Sbjct: 127 LTAKNVVDSGLDELGRIIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGILKLPGFG 186
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKM HL + +G V GI VD HV
Sbjct: 187 PKMGHLLVQIVYGQVEGIA-----------------------------------VDTHVC 211
Query: 297 RISHRLGWTK--------VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
RI+ RL W + P+D K+L LP+ W ++NHLLVGFGQ +CK+ P
Sbjct: 212 RIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLLVGFGQTVCKASFPE 271
Query: 349 CETCL 353
C CL
Sbjct: 272 CNRCL 276
>gi|159111056|ref|XP_001705761.1| Endonuclease III [Giardia lamblia ATCC 50803]
gi|157433850|gb|EDO78087.1| Endonuclease III [Giardia lamblia ATCC 50803]
Length = 323
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 89/185 (48%), Gaps = 43/185 (23%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT +N+ ++ D LG++I PVGF + KA+++K + I NY DIP + + KLPG G
Sbjct: 127 LTAKNVVDSGLDELGRIIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGILKLPGFG 186
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKM HL + +G V GI VD HV
Sbjct: 187 PKMGHLLVQIVYGQVEGIA-----------------------------------VDTHVC 211
Query: 297 RISHRLGWTK--------VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
RI+ RL W + P+D K+L LP+ W ++NHLLVGFGQ +CK+ P
Sbjct: 212 RIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLLVGFGQTVCKASFPE 271
Query: 349 CETCL 353
C CL
Sbjct: 272 CNRCL 276
>gi|408381370|ref|ZP_11178919.1| endonuclease III [Methanobacterium formicicum DSM 3637]
gi|407815837|gb|EKF86400.1| endonuclease III [Methanobacterium formicicum DSM 3637]
Length = 213
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+D+ A +L TI I +L LI P GF+ KA+ I
Sbjct: 29 YRVLIRTILSQRTRDDNTDRASAQLFSKYHTINEIAEADPTLLEPLIRPAGFYHVKAQRI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L + +P+ ++ L +LPGVG K A+ + + +
Sbjct: 89 VEVSRKLLDKFKGQVPDDMKNLLELPGVGRKTANCVLVYGF------------------- 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+IP + VDVHVHRIS+RLG KTPE+T ELE +P W
Sbjct: 130 -----------------QIPAIPVDVHVHRISNRLGLVNT-KTPEETEAELEKIVPREYW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E+N L+V FGQ IC+ Q P E C ++LC
Sbjct: 172 IELNDLMVQFGQTICRPQSPRHEECPLQELC 202
>gi|410670631|ref|YP_006923002.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanolobus psychrophilus R15]
gi|409169759|gb|AFV23634.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanolobus psychrophilus R15]
Length = 204
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y++LIS +LS +T+DEV A RL E + + + D + LI VGF++ KA+ I
Sbjct: 27 YYMLISTVLSQRTRDEVTIPATRRLFEAFDSPLKMASAEIDEIQVLIKDVGFYRVKAQRI 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ K+Y +P+++ L KLPGVG K A+ + +A+
Sbjct: 87 IDISRIMLKDYGGIVPDSMNELLKLPGVGRKTANCVLGYAF------------------- 127
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK + + VD HVHRIS+R G K +P++T KELE + W
Sbjct: 128 ---------------EKDV--IAVDTHVHRISNRFGLVKT-SSPDETEKELEKVVSRQDW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++N L+V FGQ +C+ P C C D+CP+
Sbjct: 170 KDINGLMVLFGQNVCRPMSPRCGECRLNDICPR 202
>gi|426255021|ref|XP_004021164.1| PREDICTED: endonuclease III-like protein 1 [Ovis aries]
Length = 265
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 68/97 (70%)
Query: 105 WEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEV 164
W+P W+ L+NIR MR DAPVD +G +H + +P+V+RY VL+SLMLSSQTKD+V
Sbjct: 69 WQPQDWRRQLDNIRTMRSGKDAPVDQLGAEHCFDPSASPKVQRYQVLLSLMLSSQTKDQV 128
Query: 165 NHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWK 201
AM RL+ GLT+++I T + LG LI PVGFW+
Sbjct: 129 TAGAMQRLRARGLTVDSILQTDDSTLGTLIYPVGFWR 165
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 291 VDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HVHRI++RL WTK ++PE+TR+ LE WLP LW E+N LLVGFGQQ C RP C
Sbjct: 191 VDTHVHRIANRLRWTKEATRSPEETRRALEEWLPRELWREINGLLVGFGQQTCLPVRPRC 250
Query: 350 ETCLNKDLCPQGK 362
+ CLN+ LCP +
Sbjct: 251 QACLNRALCPAAR 263
>gi|206895438|ref|YP_002247351.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
gi|206738055|gb|ACI17133.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
Length = 209
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 39/210 (18%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
VL+S +LS++TKDE+ + RL T ++C L ++ PVGF++ KAK+++
Sbjct: 34 VLLSCILSARTKDEITYPTADRLFSFYPTPLSLCQAHLTDLENILKPVGFYRQKAKYVRD 93
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
A+ ++K +P T + L ++PG+GPK A + WGI
Sbjct: 94 AACYIEKW---GVPKTTKQLTQVPGIGPKCAAIVRAFGWGI------------------- 131
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
P + VD HV RIS RLGWT+ T+ +L++ LP W
Sbjct: 132 -----------------PDIAVDAHVQRISKRLGWTEEKDDHLRTQTKLKTLLPIHEWVY 174
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
VNHLLV G+ +C+ QRP C C+ LCP
Sbjct: 175 VNHLLVSLGRHVCRPQRPLCHQCVLNSLCP 204
>gi|309791484|ref|ZP_07685988.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG-6]
gi|308226481|gb|EFO80205.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG6]
Length = 219
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS +TKD + RL H T + E + +LI PVGF+ KA+ +
Sbjct: 37 FRILVATLLSLRTKDTLTAVVAPRLFAHADTPAAMLALGEQRIAELIYPVGFYHNKARSL 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + YN +P+ +E L LPGVG K A+L
Sbjct: 97 IAIAHMLLERYNGAVPSDLEALLTLPGVGRKTANL------------------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VR +P +CVD+HVHRI++R G+ K P+ T L + LP W
Sbjct: 132 -----------VRTAGFGLPGICVDIHVHRITNRWGYVAT-KDPDATEMALRTMLPAQYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV +GQ IC P C TC C
Sbjct: 180 IPINRLLVTWGQNICHPTSPRCSTCPVATYC 210
>gi|222055487|ref|YP_002537849.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter daltonii
FRC-32]
gi|221564776|gb|ACM20748.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter daltonii
FRC-32]
Length = 218
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +T+D+ AA RL T + + +++ KL+ PVGF++ KA I
Sbjct: 36 FKVLISCILSLRTQDKTTSAASDRLFALADTPDKLAALPVEIIEKLVYPVGFFRVKAAQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S +L + Y +P+ IE L GVG K A+L + G GK
Sbjct: 96 KEISRLLMERYQGKVPDEIEELLTFKGVGRKTANLV------VTLGYGK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRI +R G+ V +TPE T + L LP W
Sbjct: 139 -------------------PGICVDTHVHRICNRWGYV-VTRTPEQTEQALRGKLPTEYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV FGQ C P C TC +++C
Sbjct: 179 LMINDLLVTFGQNQCYPISPICSTCPLREMC 209
>gi|386812677|ref|ZP_10099902.1| endonuclease III [planctomycete KSU-1]
gi|386404947|dbj|GAB62783.1| endonuclease III [planctomycete KSU-1]
Length = 215
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 102/212 (48%), Gaps = 37/212 (17%)
Query: 141 IAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFW 200
I+ E +HVLIS +LS +TKD+ H A RL T +++ + L KLI PVGF+
Sbjct: 26 ISKERTPFHVLISCILSLRTKDKTTHEASHRLFAVVNTPKDMAEIPTEKLEKLIYPVGFY 85
Query: 201 KTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESR 260
+ KAK+IK L K Y +P+ I+ L KL GVG K A+L + +
Sbjct: 86 RVKAKNIKEICKELVKTYRGKVPDEIDELLKLSGVGRKTANLVVTLGY------------ 133
Query: 261 QPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELES 320
K P +CVD HVHRI++R G+ K K P++T L
Sbjct: 134 ------------------------KKPGICVDTHVHRITNRWGYVKT-KNPKETEFALRE 168
Query: 321 WLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
LP+ W +N LLV FGQ IC P C C
Sbjct: 169 KLPKEYWLIINDLLVTFGQNICVPISPKCSFC 200
>gi|239618511|ref|YP_002941833.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
gi|239507342|gb|ACR80829.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
Length = 210
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+S +LS +T+DE A +L + I + L LI G ++ KA+ I
Sbjct: 27 YRVLVSTVLSQRTRDENTEVASKKLFSVYPDVFAIAKAKPEDLYNLIKAAGMYRQKAERI 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + YN +P+T+E L KLPGVG K A++ +N ++G
Sbjct: 87 VEISKIIVETYNGKVPDTLEELTKLPGVGRKTANIVLNVSFGKAA--------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRIS+RLGW K K PE + EL+ LPE LW
Sbjct: 132 ---------------------LAVDTHVHRISNRLGWIKT-KQPEQSEFELQKILPEELW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N +V FG+++CK P C C C
Sbjct: 170 GPLNGSMVEFGRRVCKPVNPQCNECPINSCC 200
>gi|357130118|ref|XP_003566700.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Brachypodium distachyon]
Length = 184
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 98/208 (47%), Gaps = 52/208 (25%)
Query: 183 CNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHL 242
C+ E L LI PVGF++ KA IK AS I + + DIP+++ L L GVGPK+A L
Sbjct: 11 CSEDETTLANLIKPVGFYQRKAXFIKEASKICLEVFGGDIPDSLTELLSLKGVGPKLADL 70
Query: 243 ------CMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
M+ AW GI CVD HVH
Sbjct: 71 LFFTKQVMSIAWKNTQGI-----------------------------------CVDTHVH 95
Query: 297 RISHRLGWTKVFK--------TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
RIS+RLGW V++ TPE TR LE W P+ W +N LLVGFGQ IC RP
Sbjct: 96 RISNRLGW--VYREGTKQKTTTPEQTRMSLEKWSPKDEWEPINLLLVGFGQTICTLLRPK 153
Query: 349 CETCLNKDLCPQGKKELAERVKKSPKKR 376
C +N +CP KE ++ K+ + R
Sbjct: 154 CXCGIN-TICPSVFKEPSKSKSKARETR 180
>gi|338731336|ref|YP_004660728.1| endonuclease III [Thermotoga thermarum DSM 5069]
gi|335365687|gb|AEH51632.1| endonuclease III [Thermotoga thermarum DSM 5069]
Length = 208
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 99/205 (48%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS +LS +T+DE A L +E++ + + LI P G ++ KA+ I
Sbjct: 27 FKILISTILSQRTRDENTLVASQNLFSKYPNVESLAKAKPEEIYDLIKPSGMYRQKAERI 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + YN +P+ ++ L KLPGVG K A++ + + I
Sbjct: 87 IEVSKIILEKYNGKVPSDLDELLKLPGVGRKTANIVLFQGFSI----------------- 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HVHRIS+RLG+ K KTPE T +EL LP+ LW
Sbjct: 130 -------------------PAIAVDTHVHRISNRLGFVKT-KTPEQTEEELSKVLPKRLW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
+N +V FG+ IC + P CE C
Sbjct: 170 GPINVAMVNFGRNICLPRNPRCEKC 194
>gi|253745075|gb|EET01183.1| Endonuclease III [Giardia intestinalis ATCC 50581]
Length = 321
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 90/186 (48%), Gaps = 45/186 (24%)
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
LT +N+ ++ + LG++I PVGF + KA+++K + + +Y DIP + + KLPG G
Sbjct: 127 LTAKNVLDSGVEELGRIIYPVGFSRRKAEYMKNVAQVCIDSYGGDIPGDLAGILKLPGFG 186
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
PKM HL + +G V GI VD HV
Sbjct: 187 PKMGHLLVQIVYGQVEGI-----------------------------------AVDTHVC 211
Query: 297 RISHRLGWT---------KVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRP 347
RI+ RL W KV P+D K+L LP+ W ++NHLLVGFGQ +CK+ P
Sbjct: 212 RITQRLRWVEKGMCEPDGKVL-NPDDVAKQLVETLPKDKWGDINHLLVGFGQTVCKASFP 270
Query: 348 SCETCL 353
C CL
Sbjct: 271 ECSRCL 276
>gi|150020336|ref|YP_001305690.1| endonuclease III [Thermosipho melanesiensis BI429]
gi|149792857|gb|ABR30305.1| endonuclease III [Thermosipho melanesiensis BI429]
Length = 203
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ +LS ++KDE A RL E T + + E+ L +LI P G ++ KAK I
Sbjct: 24 FKVLITTVLSQRSKDENTEIAANRLFEKYPTPQTLLKAKEEDLYELIKPAGLYRQKAKRI 83
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ ++ +P+T+E L LPGVG K A++ +
Sbjct: 84 IEISKIIVNKFSGKVPDTLEELLTLPGVGRKTANIVL----------------------- 120
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+S S+ P L VD HVHRIS+RLGW K K P +T L LP+ LW
Sbjct: 121 --YVSFSK-----------PALAVDTHVHRISNRLGWCKT-KNPNETEFALMKLLPKDLW 166
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP-QGKK 363
+N +V FG+ +C + P C+ C D C +GKK
Sbjct: 167 GPINGSMVKFGKNVCLPRNPKCDICPIYDYCKWEGKK 203
>gi|158522177|ref|YP_001530047.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
gi|158511003|gb|ABW67970.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
Length = 220
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 45/247 (18%)
Query: 114 LNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLK 173
+ +++ RK APV + + A + +L S +LS +TKD V AA RL
Sbjct: 12 VRELKKARKKSQAPVITLIANRGAT--------PFEILASTLLSLRTKDAVTDAAARRLL 63
Query: 174 EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLP 233
T E I + KLI PVGF+ TKAK + S IL + ++ +P+ +E L LP
Sbjct: 64 AVANTPEQIAALPAQKIEKLIYPVGFYPTKAKRLIEISRILLERHDGRVPDEMEALLALP 123
Query: 234 GVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDV 293
GVG K A+L + + G G+D +CVD
Sbjct: 124 GVGRKTANLVL------IEGFGRD------------------------------GICVDT 147
Query: 294 HVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCL 353
HVHRIS+R G +TPE+T L LP+ W N LLV +GQ IC P C C
Sbjct: 148 HVHRISNRTGIVTT-RTPEETEFALRKTLPKKYWKPYNELLVSYGQTICVPVSPFCSRCP 206
Query: 354 NKDLCPQ 360
+ CP+
Sbjct: 207 VEAECPK 213
>gi|189424391|ref|YP_001951568.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
gi|189420650|gb|ACD95048.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
Length = 218
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+HVL+S ++S +TKD V AA RL E + E + + + LI P GF++TKA+ I
Sbjct: 36 FHVLVSCIISLRTKDAVTAAASARLFERAASPEAMICLTPSEIADLIYPAGFYRTKAEQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
L YN +P+ +E L +L GVG K A+L M +G D+
Sbjct: 96 HAICRTLLTEYNGSVPDNLEQLLRLKGVGRKTANLVMT--------LGHDKQ-------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD+HVHRI++R G+ +P++T + L LP W
Sbjct: 140 --------------------GICVDIHVHRITNRWGYVNS-GSPDETEQFLREKLPAEYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N LLV +GQ +C P+C C D C
Sbjct: 179 KKINDLLVCYGQNLCYPVSPACSRCRLLDCC 209
>gi|304314918|ref|YP_003850065.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
gi|302588377|gb|ADL58752.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
Length = 215
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 37/223 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+DE A RL T+E++ + L +L+ GF+ KA+ I
Sbjct: 29 YRVLIRTILSQRTRDENTDEATARLFSEYPTMEDVAYAPVEKLEQLVRKAGFYHVKARRI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S IL + Y +P+ I+ L KLPGVG K A+ + +A+ +P++
Sbjct: 89 REVSRILLEEYGGRVPDDIDELLKLPGVGRKTANCVLVYAFN-----------KPVVP-- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHRIS+R+G +TPE+T + L +P W
Sbjct: 136 -----------------------VDTHVHRISNRIGLVNT-RTPEETERVLMEVIPRKYW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVK 370
E+N L+V FGQ IC+ P E C D C K + ER K
Sbjct: 172 IELNDLMVQFGQDICRPVGPRHEECPIADECDYYKSLMDEREK 214
>gi|222444488|ref|ZP_03607003.1| hypothetical protein METSMIALI_00099 [Methanobrevibacter smithii
DSM 2375]
gi|261350964|ref|ZP_05976381.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
gi|222434053|gb|EEE41218.1| endonuclease III [Methanobrevibacter smithii DSM 2375]
gi|288860304|gb|EFC92602.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
Length = 208
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+ +LS +T+DE A L I I + D + +LI GF++ KA I
Sbjct: 32 YKVLVRTILSQRTRDENTDQATKNLFGKYKNIYEIVDAPTDDVEELIRCSGFYRVKAARI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL Y ++P+ ++ L +LPGVG K A+ + +A+
Sbjct: 92 KEVSRILIDQYGGEVPDNLKELVELPGVGRKTANCVLVYAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
++P + VD HVHRIS+R+G KTPE T EL P+ LW
Sbjct: 133 -----------------ELPAIPVDTHVHRISNRIGLVNT-KTPEQTEVELAKIAPKELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N L+V FGQ ICK P CE C D+C
Sbjct: 175 IKLNDLMVQFGQTICKPMSPQCEMCPISDIC 205
>gi|148642332|ref|YP_001272845.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
gi|148551349|gb|ABQ86477.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
Length = 210
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VL+ +LS +T+DE A L I I + D + +LI GF++ KA I
Sbjct: 34 YKVLVRTILSQRTRDENTDQATKNLFGKYKNIYEIVDAPTDDVEELIRCSGFYRVKAARI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL Y ++P+ ++ L +LPGVG K A+ + +A+
Sbjct: 94 KEVSRILIDQYGGEVPDNLKELVELPGVGRKTANCVLVYAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
++P + VD HVHRIS+R+G KTPE T EL P+ LW
Sbjct: 135 -----------------ELPAIPVDTHVHRISNRIGLVNT-KTPEQTEVELAKIAPKELW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N L+V FGQ ICK P CE C D+C
Sbjct: 177 IKLNDLMVQFGQTICKPMSPQCEMCPISDIC 207
>gi|435850481|ref|YP_007312067.1| putative endoIII-related endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661111|gb|AGB48537.1| putative endoIII-related endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 208
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 39/214 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRL-KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
++VLIS +LS +T+D+V +L + +G ED L KLI VGF++ K+
Sbjct: 26 FYVLISTVLSQRTRDDVTIPTTEKLFRVYGSPAAMAAADPED-LEKLIKDVGFYRVKSGR 84
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I S IL + Y +P+ I L KLPGVG K A+ + +A+ KD
Sbjct: 85 IIEISRILLQEYEGKVPDNINDLLKLPGVGRKTANCVLTYAFR------KD--------- 129
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+ VD HVHRIS+RL PE+T ELE +P L
Sbjct: 130 ---------------------AIAVDTHVHRISNRLCLVTT-NAPEETEVELERVVPREL 167
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VN LLV FGQ +C+ P C+ C+ +DLCP
Sbjct: 168 WQYVNELLVRFGQDVCRPISPKCDICVLEDLCPS 201
>gi|153956018|ref|YP_001396783.1| hypothetical protein CKL_3410 [Clostridium kluyveri DSM 555]
gi|219856358|ref|YP_002473480.1| hypothetical protein CKR_3015 [Clostridium kluyveri NBRC 12016]
gi|146348876|gb|EDK35412.1| Hypothetical protein CKL_3410 [Clostridium kluyveri DSM 555]
gi|219570082|dbj|BAH08066.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 219
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 39/206 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y +L+S +LS+Q D VN KE+ T E + + +E+ LG+ I GF+++K+KH
Sbjct: 30 YELLVSTILSAQCTDVRVNKVTRELYKEYN-TPEKMLSLTEEELGEKIKSCGFFRSKSKH 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I AS ++ +++ ++P T+E L KL GVG K A++ +++A+GI
Sbjct: 89 ILEASRVILESHKGEVPKTMEELTKLSGVGRKTANVVLSNAFGI---------------- 132
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+RLG + TP+ KEL +PES+
Sbjct: 133 --------------------PAIAVDTHVFRVSNRLG-IAIGNTPDKVEKELMKNIPESM 171
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETC 352
WS+ +H L+ G+ ICKS++P CE C
Sbjct: 172 WSDTHHYLIWHGRLICKSRKPDCENC 197
>gi|221195209|ref|ZP_03568265.1| endonuclease III [Atopobium rimae ATCC 49626]
gi|221185112|gb|EEE17503.1| endonuclease III [Atopobium rimae ATCC 49626]
Length = 231
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L+++MLS+QT D + L E + + +G+ I +GFW+ KA H
Sbjct: 37 YTLLVAVMLSAQTTDAAVNKVTPELFRRWPNPEAMASAQPSEVGECIRTIGFWRAKAAHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL +Y ++P T+E L KLPGVG K A++ +N + V GI
Sbjct: 97 TEMAQILMADYGGEVPQTMEELVKLPGVGRKTANIVLNKMFNTVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV+RI+ RL T TP ++L S LP LW
Sbjct: 145 -----------------------VDTHVYRIASRLRLTSA-ATPLAAEQDLLSLLPHELW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+VN + FG+ IC ++ P+C C D+CP
Sbjct: 181 KDVNEEWIHFGRDICTARNPTCSACPLSDICP 212
>gi|410583666|ref|ZP_11320771.1| DNA-(apurinic or apyrimidinic site) lyase [Thermaerobacter
subterraneus DSM 13965]
gi|410504528|gb|EKP94038.1| DNA-(apurinic or apyrimidinic site) lyase [Thermaerobacter
subterraneus DSM 13965]
Length = 258
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + L T E + SED LG +I +G W+ KA+++
Sbjct: 47 FELLVATILSAQTTDAAVNQVTPALFARCPTPEAMLELSEDELGAMIRTIGLWRNKARNL 106
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A IL + + +P T E L +LPGVG K A++ +++A+G
Sbjct: 107 LAACRILVERHGGQVPRTREELMQLPGVGRKTANVVLSNAFG------------------ 148
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R++ RLG TPE +EL PE+ W
Sbjct: 149 ------------------IPAIAVDTHVFRVARRLG-LATGTTPERVEQELMEKFPEAEW 189
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
S +H L+ G++IC ++ P C+ C + CP+G+
Sbjct: 190 SRAHHWLIWHGRRICHARNPRCQACALRPDCPEGR 224
>gi|303232986|ref|ZP_07319666.1| endonuclease III [Atopobium vaginae PB189-T1-4]
gi|302480913|gb|EFL43993.1| endonuclease III [Atopobium vaginae PB189-T1-4]
Length = 250
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 36/216 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+QT D ++ G L T + + D + ++I +GFWKTKA+H
Sbjct: 67 FTLTIAVLLSAQTTDAAVNSVTGELFSRWPTPQAMATAPIDSVEQVIRRIGFWKTKARHC 126
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ ++ +P T+ L +LPGVG K A++ MN A+ GI
Sbjct: 127 VDTARMIVNDFGGTVPRTMAELTRLPGVGRKTANIVMNKAFNNAEGIA------------ 174
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV RI+ RL +T TP ++L + +P LW
Sbjct: 175 -----------------------VDTHVFRIATRLEFTHA-ATPLAAEQDLLAIIPRELW 210
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
VN + FG+++C +++P C+TC +DLCP +
Sbjct: 211 CNVNEEWIHFGREVCPARKPHCDTCFERDLCPFAAR 246
>gi|399889193|ref|ZP_10775070.1| endonuclease III [Clostridium arbusti SL206]
Length = 214
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 37/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS +LS+Q D+ + +L T E + +++ L + I P GF++ K+K+I
Sbjct: 30 YELLISTILSAQCTDKRVNIVTEKLFSEYNTPEKMVELTDEELQEKIKPCGFYRNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L +YN+++P+ +E L KLPGVG K A++ M++A+ I
Sbjct: 90 LATSRALLFDYNSEVPSAMEDLIKLPGVGRKTANVVMSNAFNI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S R+G+ TP +EL +P+ LW
Sbjct: 133 -------------------PAIAVDTHVFRVSKRIGFASG-DTPLKVEEELRKVIPKKLW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
S +H L+ G+QICKS++P CE C + C K+ R
Sbjct: 173 SNAHHYLIWHGRQICKSRKPQCEICPISEYCNYYKENFISR 213
>gi|406982493|gb|EKE03804.1| Endonuclease III [uncultured bacterium]
Length = 211
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 103/212 (48%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LI+ +LS +TKDE + A RL G T ++ +E+ + K I PVGF++ K I
Sbjct: 33 FKTLIACLLSLRTKDETTYGATLRLFNLGSTPDDFLKLNEEEIQKAIYPVGFYRNKTGVI 92
Query: 208 -KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ D+L K YN +P+ I+ L KL GVG K A+L ++ +G
Sbjct: 93 LGICRDLLDK-YNGIVPDEIDELLKLKGVGRKTANLVVSKGYGK---------------- 135
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P +CVD HVHRIS+RLG+ K K P++T L LP+
Sbjct: 136 --------------------PAICVDTHVHRISNRLGFVKT-KNPDETEMALREKLPKKY 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W+++N L+V GQ CK P C C + C
Sbjct: 175 WNKINDLMVTHGQNTCKPVNPKCNICTIEPYC 206
>gi|333995660|ref|YP_004528273.1| endonuclease III [Treponema azotonutricium ZAS-9]
gi|333736234|gb|AEF82183.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Treponema azotonutricium ZAS-9]
Length = 247
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 54/247 (21%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EP + VL++ E+++ G P A + VL+S +LS +TKD V
Sbjct: 40 EPGTPRTVLSDREELKERGSPPDKA-----------------WAVLVSTILSLRTKDAVT 82
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
L E + + E+ KL P GF++TKA +++ + IL Y +P
Sbjct: 83 LKTSKSLLEKAPGPKELIGLGEEKTAKLAYPAGFYRTKAANLQKIAVILLTQYGGKVPAD 142
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++ L LPGVG K A+L + A+
Sbjct: 143 MDALLSLPGVGRKTANLVLTEAF------------------------------------D 166
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
+ +CVD+HVHRIS+R+GW + + P+ T EL LP+ W +N LLV +GQ +C+
Sbjct: 167 MDGICVDIHVHRISNRMGWVET-EVPDKTEAELREILPKRYWKRINALLVLYGQNVCRPV 225
Query: 346 RPSCETC 352
P C C
Sbjct: 226 SPFCSRC 232
>gi|156742725|ref|YP_001432854.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
gi|156234053|gb|ABU58836.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
Length = 219
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 119 EMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLT 178
EM + +D MG + + N + +LI+ +LS +TKD + RL +
Sbjct: 16 EMPRFPKPLIDGMGEEEANN--------PFRILIATILSLRTKDTMTAVVAPRLFAVADS 67
Query: 179 IENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPK 238
E + SE+ + +LI PVGF++ KA+ I+ L + + +P ++ L LPGVG K
Sbjct: 68 PEKMLALSEEEIAELIYPVGFYRNKARTIRAICRRLIEEHGGKVPADLDALLALPGVGRK 127
Query: 239 MAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRI 298
A+L + + +P +CVD HVHRI
Sbjct: 128 TANLVLTAGF------------------------------------DLPGICVDTHVHRI 151
Query: 299 SHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+R G+ + +TPE+T +L LP W E+N LLV GQ IC P C C LC
Sbjct: 152 CNRWGYVQT-RTPEETEMKLREILPFEYWKEINGLLVTLGQNICHPTSPRCSACPLAHLC 210
>gi|261403295|ref|YP_003247519.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
gi|261370288|gb|ACX73037.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
Length = 346
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 42/227 (18%)
Query: 140 DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGF 199
+IA E + VL+S ++S++TKDE+ +L + ++++ E+ L LI P GF
Sbjct: 21 EIAKERDPFKVLVSTVISARTKDEITEEVSKKLFKEVKNVDDLLKIDEEKLANLIYPAGF 80
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
+K KAK++K + ILK+ Y +PN++E L KLPGVG K A+L + A+ KD
Sbjct: 81 YKNKAKNLKKMAKILKEEYGGKVPNSLEDLLKLPGVGRKTANLVLTLAF------DKD-- 132
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKEL 318
+CVD HVHRI +R W +TPE+T EL
Sbjct: 133 ----------------------------GICVDTHVHRICNR--WEIVETETPEETEFEL 162
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
LP+ W +N+LLV FG++IC S +P CE C +D CP K
Sbjct: 163 RKKLPKKYWKVINNLLVVFGKEIC-SPKPKCEKCFYEIRDKCPYYAK 208
>gi|297619394|ref|YP_003707499.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
gi|297378371|gb|ADI36526.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
Length = 366
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 40/220 (18%)
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
R + +L+S ++S++TKDE ++ + T E++ N L +++ P GF+KTK+K
Sbjct: 41 RAFKILLSTVISARTKDETTAKVSKKIFDRIKTPEDLINIDITELEEIVHPAGFYKTKSK 100
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
++K LK++YNN +PNT+E L KL GVG K A+L ++ A+
Sbjct: 101 NLKKLGTQLKEDYNNKVPNTVEELVKLAGVGRKTANLVVSLAFDNYA------------- 147
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
+CVD HVHRI +R + PE+T +EL LP+
Sbjct: 148 -----------------------ICVDTHVHRICNRWNYVST-DFPEETEQELRKKLPKK 183
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
W +N+ LV +GQ +C S P C C K +CP K
Sbjct: 184 YWKSINNSLVVYGQDVC-SPTPKCNLCYEEIKSICPHYSK 222
>gi|223477172|ref|YP_002581604.1| Endonuclease III [Thermococcus sp. AM4]
gi|214032398|gb|EEB73228.1| Endonuclease III [Thermococcus sp. AM4]
Length = 239
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP--VGFWKTKAK 205
Y L+ ++S + +DEV + L E IE I NT D + + + VG WKTK +
Sbjct: 41 YRTLVHCIISQRMRDEVTYRVWEELFEKYRDIETIANTPVDEMREFLRKRGVGLWKTKGE 100
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + YN +P+ I L KLPG+G K A++ + + +G
Sbjct: 101 WIVKASRIILEKYNGKVPDDINELMKLPGIGRKCANIVLAYGFG---------------- 144
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L +P+
Sbjct: 145 -----------------KQAIP---VDTHVNRISKRLGLAPPRVPPEKVEEYLRELIPKE 184
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ ICK RP CE+C K+LCP K
Sbjct: 185 KWIYVNHAMVDHGRSICKPIRPKCESCPLKELCPYAK 221
>gi|332157727|ref|YP_004423006.1| endonuclease III [Pyrococcus sp. NA2]
gi|331033190|gb|AEC51002.1| endonuclease III [Pyrococcus sp. NA2]
Length = 220
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L + TI +I N S D + + + + VG WK K K
Sbjct: 35 YKTLIKCIISQRNRDEVTDRVSEELFKRYPTIRDIANASIDEMREFLRSLKVGLWKNKGK 94
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S IL + Y+ +P+ + L KLPG+G K A++ + + +GI
Sbjct: 95 WIVEVSRILLEKYDGKVPDKFDELLKLPGIGRKCANIVLAYGFGI--------------- 139
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+RIS RLG +PE+ + L+S +P
Sbjct: 140 ---------------------PAIPVDTHVYRISRRLGLAPWDASPEEVEERLKSLIPRE 178
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G++IC+ P C C +DLCP+
Sbjct: 179 EWIYVNHAMVDHGKRICRPVEPRCNECPLRDLCPR 213
>gi|15678789|ref|NP_275906.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
gi|2621854|gb|AAB85267.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 233
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+DE A L E +IE++ + + LI GF+ KA+ +
Sbjct: 46 YRVLIRTILSQRTRDENTDEATASLFERYPSIEDVAYAPLEEIEALIRKAGFYHVKARRV 105
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S I+ + Y+ +P+ I L KLPGVG K A+ + +A+G
Sbjct: 106 REVSRIILEEYDGKVPDDINELLKLPGVGRKTANCVLVYAFGR----------------- 148
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HVHRIS+R+G +TPE+T + L +P W
Sbjct: 149 -------------------PAIPVDTHVHRISNRIGLVDT-RTPEETERALMKVIPREYW 188
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
E+N L+V FGQ IC+ P E C D C + R+K+ KK+
Sbjct: 189 IELNDLMVQFGQDICRPLGPRHEECPIADHC-----DYYFRIKEEGKKK 232
>gi|254168132|ref|ZP_04874979.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|197622898|gb|EDY35466.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
Length = 211
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 39/224 (17%)
Query: 137 ANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI 194
ANV P R + VLI+ ++S +TKDEV + +L ++ N D + LI
Sbjct: 16 ANVPPHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLFGKYPLPRDLKNAPTDDIAHLI 75
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
P GF+ KAK IK + I+ ++Y+ +P+ +E L KLPGVG K A++ ++ +
Sbjct: 76 YPAGFYNQKAKKIKEIAKIIDEDYDGKVPDNLEDLLKLPGVGRKTANIVLSRCY------ 129
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
+K + + VD HVHRIS+RLGW KTPE+T
Sbjct: 130 ----------------------------DKDV--IAVDTHVHRISNRLGWVNT-KTPEET 158
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+EL LP+ W ++N LLV FG+ IC+ P C+ C K C
Sbjct: 159 ERELMKVLPKKYWKDINELLVMFGRTICRPVAPKCDVCPIKKYC 202
>gi|41223388|tpe|CAD59973.1| TPA: putative endonuclease III homologue [Trypanosoma brucei]
Length = 151
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 78/165 (47%), Gaps = 36/165 (21%)
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A++ + + + +P + E L LPGVGPKMAHL + A +V GIG
Sbjct: 1 KAATESILQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQEADSVVIGIG------------ 48
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
VD HVHRI+ R W K+PEDTRK LE+WLP
Sbjct: 49 -----------------------VDTHVHRIAQRFHWVPSTVKSPEDTRKALEAWLPAKY 85
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKK 371
W E+N +LVG GQ IC + P C C LCP +E VK+
Sbjct: 86 WGEINGMLVGLGQTICTPRIPRCSECPASGLCPSAFREAKGGVKR 130
>gi|302039433|ref|YP_003799755.1| endonuclease III [Candidatus Nitrospira defluvii]
gi|300607497|emb|CBK43830.1| Endonuclease III [Candidatus Nitrospira defluvii]
Length = 219
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS +LS +TKD+ A RL +T + + ++ + I PVGF++TKAK I
Sbjct: 37 FLVLISCLLSLRTKDKTTAEASERLFALAVTPATMQTLTIPIIERAIYPVGFYRTKAKQI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + Y +P+ I+ L LPGVG K A+L V +G ++
Sbjct: 97 QQICAQLLERYQGRVPDKIDELLTLPGVGRKTANL--------VVTVGYEK--------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD+HVHRIS+R G+ K K+P++T L + LP W
Sbjct: 140 -------------------PGICVDIHVHRISNRWGYVKT-KSPDETETALRAKLPRKYW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
N LLV +GQ +C+ P C C C
Sbjct: 180 ITFNDLLVPYGQHLCQPVSPLCSQCKIAAYC 210
>gi|374995930|ref|YP_004971429.1| endonuclease III [Desulfosporosinus orientis DSM 765]
gi|357214296|gb|AET68914.1| endonuclease III [Desulfosporosinus orientis DSM 765]
Length = 219
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 37/219 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q DE + L T E I + L I +G + KAK+I
Sbjct: 35 FELLIATILSAQCTDERVNLVTASLFSEANTPEKIIKLGQTTLENKIRSLGLFHNKAKNI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A +L + YN +P +ELL +LPGVG K A++ ++A+GI
Sbjct: 95 LSACQVLVEKYNGQVPEDLELLKELPGVGRKTANVVASNAFGI----------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++HRLG KTPE EL P+ W
Sbjct: 138 -------------------PAIAVDTHVFRVAHRLGIASG-KTPEKVEDELREVFPQDRW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
S V+HLL+ G++IC +++P CE C +C +EL+
Sbjct: 178 SIVHHLLIFLGRRICSARKPRCEECPVSSVCMMYLEELS 216
>gi|91201723|emb|CAJ74783.1| similar to endonuclease III [Candidatus Kuenenia stuttgartiensis]
Length = 217
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+HVLIS +LS +TKD+ AA RL E++ L KLI PVGF++ KA I
Sbjct: 35 FHVLISCLLSLRTKDQTTRAASERLFAIADNPEDMKKIPLQKLEKLIYPVGFYRRKAVTI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + L K+Y +P+ I+ L KL GVG K A+L ++ +
Sbjct: 95 QEICETLTKDYEGKVPDEIDELLKLNGVGRKTANLVVSLGY------------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K P +CVDVHVHRI++R G+ K KTP +T L LP W
Sbjct: 136 -----------------KKPGICVDVHVHRINNRWGYIKT-KTPAETECALRKKLPAKYW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV +GQ IC P C C C
Sbjct: 178 LCINDLLVTYGQNICVPISPKCSLCPVNSYC 208
>gi|408403428|ref|YP_006861411.1| endonuclease III [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364024|gb|AFU57754.1| putative endonuclease III [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 223
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++T+DE + +L T +++ + D + K+I +GF+ KA+ I
Sbjct: 35 FKILIGTILSARTRDENTTRVVNKLFARFKTPQDLASADIDEIKKIIHSIGFYNIKAERI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S +L + +P+ I+ L KLPGVG K A+ + +A+ D+
Sbjct: 95 KQVSQMLISKFGGRVPSDIDSLLKLPGVGRKTANCVLVYAF--------DK--------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VDVHVHRIS+RLG KTPE T ++L + LW
Sbjct: 138 -------------------PAIPVDVHVHRISNRLGLVST-KTPEQTEQDLSKLVDRKLW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++VN V +GQ IC RP+C+ C K +C
Sbjct: 178 TKVNDTFVMYGQNICLPVRPNCKACDLKKMC 208
>gi|410721172|ref|ZP_11360516.1| putative endoIII-related endonuclease [Methanobacterium sp.
Maddingley MBC34]
gi|410599623|gb|EKQ54169.1| putative endoIII-related endonuclease [Methanobacterium sp.
Maddingley MBC34]
Length = 213
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+D+ A +L T+ I +L LI P GF+ KA+ I
Sbjct: 29 YRVLIRTILSQRTRDDNTDRASAQLFSKYHTMAEIAEADPALLEPLIRPAGFYHVKAQRI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ + +P+ ++ L +LPGVG K A+ C+ +V G K
Sbjct: 89 VEVSRKLQDEFKGQVPDYMKGLLELPGVGRKTAN-CV-----LVYGFQK----------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VDVHVHRIS+RLG K PE+T ELE +P W
Sbjct: 132 -------------------PAIPVDVHVHRISNRLGLVDT-KHPEETEAELEKLVPREYW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E+N L+V FGQ IC+ Q P E C ++LC
Sbjct: 172 IELNDLMVQFGQTICRPQSPRHEECPLQELC 202
>gi|291280240|ref|YP_003497075.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754942|dbj|BAI81319.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 220
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S ++S +TKDEV +L E T + ++ L K++ P GF++ K K +
Sbjct: 38 FKVLVSCLISLRTKDEVTLEVSKKLFEVADTPNKLLKMEDEELEKILYPAGFYRKKVKVL 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S L + Y +P+++E L K+ GVG K A+L + V G K+
Sbjct: 98 KEVSKTLIEKYEGRVPDSLEELLKIKGVGRKTANLVL------VEGFDKE---------- 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRI +RLG K KTPE T +L LP+ +W
Sbjct: 142 --------------------GICVDTHVHRICNRLGVVKT-KTPEQTEMDLRKILPKHMW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ N +LV +GQ ICK P C C+ D C
Sbjct: 181 KKWNEILVSYGQHICKPISPLCSACILYDKC 211
>gi|139438722|ref|ZP_01772206.1| Hypothetical protein COLAER_01208 [Collinsella aerofaciens ATCC
25986]
gi|133775802|gb|EBA39622.1| endonuclease III [Collinsella aerofaciens ATCC 25986]
Length = 221
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 37/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+QT D + +L T E + S + I +GF+K+KAKH
Sbjct: 37 FRLLIAVLLSAQTTDAQVNKVTPKLFAQWPTPEAMAGASVADVADTIKSLGFYKSKAKHA 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ ++ +Y ++P ++ L KLPGVG K A++ +N +GIV GI
Sbjct: 97 VEAAQMIVADYGGEVPADMKELVKLPGVGRKTANIVLNVGYGIVEGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLPES 325
VD HV+RI+HRL + K P T ++L LP
Sbjct: 145 -----------------------VDTHVNRIAHRLMLSPKTHAKEPLKTEQDLLKILPHE 181
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W VNH + FG++IC +++P C+ C DLCP
Sbjct: 182 YWESVNHQWITFGREICDARKPKCDECPLADLCP 215
>gi|18977601|ref|NP_578958.1| glycosylase [Pyrococcus furiosus DSM 3638]
gi|397651727|ref|YP_006492308.1| endonuclease III [Pyrococcus furiosus COM1]
gi|18893320|gb|AAL81353.1| glycosylase putative; mutY-nth family [Pyrococcus furiosus DSM
3638]
gi|393189318|gb|AFN04016.1| endonuclease III [Pyrococcus furiosus COM1]
Length = 225
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L + +IE I N S + + + + VG WK K K
Sbjct: 44 YRTLIRCIISQRNRDEVTDKVSEELFKRYKSIEEIANESVENMQEFLRKQKVGLWKNKGK 103
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ Y +PNT+E L KLPG+G K A++ + + G GK
Sbjct: 104 WIVEASRIILYKYGGKVPNTLEELMKLPGIGRKCANIVLAY------GFGK--------- 148
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+RIS RLG + TPE + L++ +P
Sbjct: 149 ---------------------PAIPVDTHVYRISRRLGLAPINSTPEKVEEILKTLIPVE 187
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G+ IC+ +P CE C +LCP+
Sbjct: 188 EWIYVNHAMVDHGKSICRPIKPKCELCPLNELCPK 222
>gi|346311311|ref|ZP_08853318.1| endonuclease III [Collinsella tanakaei YIT 12063]
gi|345901141|gb|EGX70949.1| endonuclease III [Collinsella tanakaei YIT 12063]
Length = 222
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++IS++LS+QT D + L E T E + + + ++I +GF+KTKAKH
Sbjct: 37 FRLVISVLLSAQTTDAQVNKVTPALFERWPTPEAMAGATAAEVAEVIKSLGFYKTKAKHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ ++ +Y ++P ++ L KLPGVG K A++ +N A+GIV GI
Sbjct: 97 VEAAQMIVADYGGEVPADMKELVKLPGVGRKTANIVLNVAFGIVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLPES 325
VD HV+RI+HRL + K P T ++L LP
Sbjct: 145 -----------------------VDTHVNRIAHRLKLSPKTHEKEPLKTEQDLLKILPRE 181
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W++VNH + G++IC +++P C C D+CP
Sbjct: 182 YWNDVNHQWIMLGREICDARKPLCGECPLADICPSA 217
>gi|375084054|ref|ZP_09731064.1| endonuclease III [Thermococcus litoralis DSM 5473]
gi|374741220|gb|EHR77648.1| endonuclease III [Thermococcus litoralis DSM 5473]
Length = 237
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP--VGFWKTKAK 205
Y LI ++S + +DEV + L + IE I NT + + + + VG WKTK +
Sbjct: 48 YKTLIHCIISQRMRDEVTYKVWRELFKKYKNIETIANTPIEEMQEFLRKNGVGLWKTKGE 107
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + Y +P+ IE L KLPG+G K A++ + + +G
Sbjct: 108 WIVRASQIILEEYGGKVPDKIEELMKLPGIGRKCANIVLAYGFG---------------- 151
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG +PE + L+ +P+
Sbjct: 152 -----------------KQTIP---VDTHVNRISKRLGLAPPKVSPEKVEEYLKQLIPKD 191
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
LW VNH +V G++ICK P C C +DLCP K ++ +R
Sbjct: 192 LWIYVNHAMVDHGKRICKPINPKCTECPLQDLCPYAKGQIDKR 234
>gi|419759441|ref|ZP_14285740.1| endonuclease III [Thermosipho africanus H17ap60334]
gi|407515451|gb|EKF50196.1| endonuclease III [Thermosipho africanus H17ap60334]
Length = 203
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ +LS ++KDE A L T + E+ + +LI P G ++ KAK I
Sbjct: 24 FKVLITTVLSQRSKDENTEIAAENLFNKYKTPLELSKAKEEDIYELIKPAGLYRQKAKRI 83
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + Y+ +P+++E L KLPGVG K A++ +
Sbjct: 84 IEISKIIVEKYSGIVPDSLEELLKLPGVGRKTANIVL----------------------- 120
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+S S+ P L VD HVHRIS+RLGW KTPE+T +L LP++LW
Sbjct: 121 --YVSFSK-----------PALAVDTHVHRISNRLGWVNT-KTPEETEFKLMEILPKNLW 166
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N +V FG+++CK P+C+ C C
Sbjct: 167 GPINGSMVEFGKKVCKPVSPNCKICPISKYC 197
>gi|374581726|ref|ZP_09654820.1| endonuclease III [Desulfosporosinus youngiae DSM 17734]
gi|374417808|gb|EHQ90243.1| endonuclease III [Desulfosporosinus youngiae DSM 17734]
Length = 216
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q DE + L T ++I N + L I +G + KAK+I
Sbjct: 35 FELLVATILSAQCTDERVNLVTASLFAEANTPQSILNLGQTALESKIRSLGLFHNKAKNI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A +L + +N ++P +ELL LPGVG K A++ +++A+GI
Sbjct: 95 LAACKVLVEKFNGEVPADLELLRSLPGVGRKTANVVVSNAFGI----------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++HRLG + KTPE +EL P W
Sbjct: 138 -------------------PAIAVDTHVFRVAHRLGIARG-KTPEKVEEELMKIFPRERW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S V+HLL+ G++IC +++P+CE C +C
Sbjct: 178 SLVHHLLIFHGRRICSARKPACEECPVNQVC 208
>gi|313672585|ref|YP_004050696.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939341|gb|ADR18533.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 218
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS ++S +TKDEV A RL ++ S D + +LI P GF++ K+ I
Sbjct: 36 FAVLISTLISLRTKDEVTLKASERLFSRADNPFDMLKLSTDEVERLIYPAGFYRKKSLLI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L +NY +PN+++ L K+ GVG K A+L + +G+
Sbjct: 96 LDISKYLVENYQGRVPNSLDELLKIKGVGRKTANLVLVEGFGV----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRI +R+G K P++T L LP W
Sbjct: 139 -------------------PAVCVDTHVHRIMNRMGLVNT-KNPDETEMVLRDKLPVKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ N LV +GQ +CK P C TC D C +
Sbjct: 179 IKWNEYLVAYGQNVCKPISPLCSTCKLSDFCAK 211
>gi|56758404|gb|AAW27342.1| unknown [Schistosoma japonicum]
Length = 124
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 74/145 (51%), Gaps = 36/145 (24%)
Query: 228 LLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIP 287
L L GVGPKMA+L M AW VTGIG
Sbjct: 11 FLIILLGVGPKMAYLAMKCAWKKVTGIG-------------------------------- 38
Query: 288 QLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
VD HVHRI++RL W+K KTPE+TR LE WLP W E+N LLVGFGQQIC+
Sbjct: 39 ---VDTHVHRITNRLKWSKRPTKTPEETRMALEEWLPREYWDEINLLLVGFGQQICRPVN 95
Query: 347 PSCETCLNKDLCPQGKKELAERVKK 371
P+C CLN+ +CP K + KK
Sbjct: 96 PNCMGCLNRSICPSASKLTLKNYKK 120
>gi|323452320|gb|EGB08194.1| hypothetical protein AURANDRAFT_14127, partial [Aureococcus
anophagefferens]
Length = 213
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 40/243 (16%)
Query: 114 LNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLK 173
L + R+ G APVD G + P V R+ L++L+LS++T DE + + L+
Sbjct: 1 LAALEAFRRKGGAPVDLYGCQTLGDRSAPPHVFRFQTLVALILSARTTDEATMSCVRDLQ 60
Query: 174 --EHGLTIENICNTSEDVLGKLII--PVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
+ GLT + + L + + V F + KA++++ A+++ + +Y D+P + +
Sbjct: 61 WADGGLTADTLAAADASTLERALANHEVAFPRNKARYLRRAAELCRDSYGGDVPRDLPSI 120
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
LPGVG K+A L AWG G +
Sbjct: 121 RALPGVGDKVAALLTQAAWGDDAG----------------------------------GV 146
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD H HRI++RLGW T++++E++LP W N LLVGFGQ++C P+C
Sbjct: 147 AVDTHFHRIANRLGWVATATA-AATKRDVEAFLPRDRWVAANPLLVGFGQEVC-GYAPNC 204
Query: 350 ETC 352
E+C
Sbjct: 205 ESC 207
>gi|383785899|ref|YP_005470468.1| DNA-(apurinic or apyrimidinic site) lyase [Fervidobacterium
pennivorans DSM 9078]
gi|383108746|gb|AFG34349.1| endonuclease III [Fervidobacterium pennivorans DSM 9078]
Length = 220
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ +LS +++DE + L +E + + L LI P G +K KA+ I
Sbjct: 40 FKVLITTILSQRSRDENTEVSAKNLFSVYENVEQLAQAKPEELYDLIRPSGLYKEKAERI 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + Y +P+ +E L LPGVG K A++ ++ ++G
Sbjct: 100 IAVSKIILEKYGGRVPDNLEELLSLPGVGRKTANIVLHVSFGQQA--------------- 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRIS+RLGW KTPE T +EL+ L +LW
Sbjct: 145 ---------------------LAVDTHVHRISNRLGWVNT-KTPEQTEEELKKILDPNLW 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
VN +V FG+QIC+ P CE C C
Sbjct: 183 GPVNGSMVEFGKQICRPISPKCEECFLTACC 213
>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
LSv54]
Length = 480
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 103/213 (48%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDE A+ RL T E + SE+ L KLI PVGF+K KA ++
Sbjct: 35 FKVLVATILSARTKDETTAASSKRLFARAQTAEELTELSEEELQKLIYPVGFYKNKAGYL 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + LK+ + +P T+ L +LPGVG K A+L ++ A+
Sbjct: 95 KKLPEALKE-FKGVVPETMTELLRLPGVGRKTANLVLSIAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K P +CVD HVHRI + G+ + TP T L LPE W
Sbjct: 135 -----------------KKPAICVDTHVHRIMNIWGYVET-ATPLKTEMALREKLPEEFW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VN LLV GQ IC+ P C C + CPQ
Sbjct: 177 IPVNSLLVSLGQSICRPVSPRCSECPLEKECPQ 209
>gi|317121615|ref|YP_004101618.1| DNA-(apurinic or apyrimidinic site) lyase [Thermaerobacter
marianensis DSM 12885]
gi|315591595|gb|ADU50891.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Thermaerobacter marianensis DSM 12885]
Length = 271
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 37/219 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + L T + +ED LG +I +G W+ KA+++
Sbjct: 33 FELLVATILSAQTTDAAVNQVTPALFARCPTPAAMLELTEDELGAMIRTIGLWRNKARNL 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A IL + + +P T E L +LPGVG K A++ +++A+GI
Sbjct: 93 LAACRILVERHGGQVPRTREELVQLPGVGRKTANVVLSNAFGI----------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++ RLG TPE +EL +PE+ W
Sbjct: 136 -------------------PAIAVDTHVFRVARRLGLAS-GTTPERVEQELMEKIPEAEW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
S +H L+ G++IC ++ P C+ C + CP G+ LA
Sbjct: 176 SRAHHWLIWHGRRICHARNPRCDLCALRPDCPTGQARLA 214
>gi|242398202|ref|YP_002993626.1| Endonuclease III [Thermococcus sibiricus MM 739]
gi|242264595|gb|ACS89277.1| Endonuclease III [Thermococcus sibiricus MM 739]
Length = 233
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLII--PVGFWKTKAK 205
Y LI ++S + +DEV + L + IENI N + + + + VG WKTK +
Sbjct: 44 YKTLIYCIISQRMRDEVTNKVGKMLFKKYKNIENIANAPVEEMQEFLRNNGVGLWKTKGE 103
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S I+ + Y +PN IE L KLPG+G K A++ + + +G
Sbjct: 104 WIVRTSQIILREYRGRVPNKIEELMKLPGIGRKCANIVLAYGFG---------------- 147
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L+ +PE
Sbjct: 148 -----------------KQTIP---VDTHVNRISKRLGLAPPTVAPEKVEEYLKKLIPED 187
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
LW +NH +V G++ICK P C C +DLCP
Sbjct: 188 LWIYINHAMVDHGKRICKPIGPKCHECFFQDLCP 221
>gi|392376190|ref|YP_003208023.1| Endonuclease III [Candidatus Methylomirabilis oxyfera]
gi|258593883|emb|CBE70224.1| putative Endonuclease III [Candidatus Methylomirabilis oxyfera]
Length = 219
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 102/221 (46%), Gaps = 38/221 (17%)
Query: 133 WDHSANVDIAPEVRR-YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLG 191
W+ + IA + R + VLIS +LS QTKD++ A RL + I SE +
Sbjct: 21 WEPAVVGKIAEDSRDPFRVLISCILSQQTKDQITGEASERLYRLADRPDTILALSELQIA 80
Query: 192 KLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIV 251
+ I PV F+KTKA+ I+ L ++ +P+TIE L L GVG K A+L + +
Sbjct: 81 RAIYPVSFYKTKARTIRKVCQDLLTRFDGRVPDTIEALLSLTGVGRKTANLVVTVGY--- 137
Query: 252 TGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTP 311
RK P +CVD HVHRIS+R G+ +TP
Sbjct: 138 ----------------------------RK-----PGICVDTHVHRISNRWGYVST-RTP 163
Query: 312 EDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETC 352
E T L LP+ W N LLV FGQ +C+ P C C
Sbjct: 164 EQTEMALRLKLPKRHWIYYNDLLVPFGQNLCRPISPFCSRC 204
>gi|428186143|gb|EKX54994.1| hypothetical protein GUITHDRAFT_54498, partial [Guillardia theta
CCMP2712]
Length = 133
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 36/168 (21%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+H L++LMLSSQTKD+V AM +K+ GLT++++ S+ L +I VGF K K I
Sbjct: 2 FHALVALMLSSQTKDQVVAEAMITMKKRGLTVDSVLEMSDKELDSMISKVGFHNNKTKFI 61
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A+ ILK+ + +P T+E LC+LPGVGPKMA + + A+GI++GIG
Sbjct: 62 KQAAMILKEKHGGRVPRTLEELCELPGVGPKMALITLKAAFGIISGIG------------ 109
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTR 315
VD H+HR+ + L W TPE R
Sbjct: 110 -----------------------VDTHMHRMFNELKWVNS-STPEKVR 133
>gi|254168035|ref|ZP_04874883.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289596043|ref|YP_003482739.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
gi|197623078|gb|EDY35645.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289533830|gb|ADD08177.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
Length = 211
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 39/224 (17%)
Query: 137 ANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI 194
ANV P R + VLI+ ++S +TKDEV + +L ++ N D + LI
Sbjct: 16 ANVPPHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLFGKYPLPRDLKNAPTDDIAHLI 75
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
P GF+K KAK IK + I+ ++Y+ +P+ +E L KLPGVG K A++ ++ +
Sbjct: 76 YPAGFYKQKAKKIKEIAKIIDEDYDGKVPDNLEELLKLPGVGRKTANIVLSRCYD----- 130
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDT 314
KD + VD HVHRIS+RLGW KTPE+T
Sbjct: 131 -KD------------------------------VIAVDTHVHRISNRLGWVNT-KTPEET 158
Query: 315 RKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+EL L + W ++N LLV FG+ IC+ P C+ C K C
Sbjct: 159 ERELMKVLLKKYWKDINELLVMFGRTICRPVAPKCDVCPIKKYC 202
>gi|433637776|ref|YP_007283536.1| endonuclease III [Halovivax ruber XH-70]
gi|433289580|gb|AGB15403.1| endonuclease III [Halovivax ruber XH-70]
Length = 227
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E + E+ N ++ L + + + F+ KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFETYQSPEDYANAPQEELAEALNSINFYNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A +++ + ++ ++P+T++ L +LPGVG K A++ + H +V GI
Sbjct: 95 IREACELIVEEHDGEVPDTMDELTELPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIEQDLLDIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HLL+ G+ C ++ P CE+C+ D+CP K +
Sbjct: 179 WVQFTHLLIDHGRATCTARNPDCESCVLADICPSEKGD 216
>gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
Length = 481
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 46/230 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS++TKDEV AA RL T + + + +LI PVGF++TKAKH+
Sbjct: 35 FKVLVATILSARTKDEVTAAAARRLFARASTAAELATLTVADVEQLIYPVGFFRTKAKHL 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
L++ + +P+ I+ L +LPGVG K A+L + A+
Sbjct: 95 GELPGALQR-FGGVVPDDIDSLVQLPGVGRKTANLVVAVAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRI + G+ + TP T L LP W
Sbjct: 135 -----------------HKPAICVDTHVHRIMNIWGYVQT-TTPLQTEMVLRQKLPRQYW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
+N LLV FGQ CK QRP C+ C+ CP R+ +P+K++
Sbjct: 177 IRINGLLVAFGQGTCKPQRPHCDRCVIAAYCP--------RLGVTPRKKQ 218
>gi|14591284|ref|NP_143362.1| endonuclease III [Pyrococcus horikoshii OT3]
gi|3257923|dbj|BAA30606.1| 222aa long hypothetical endonuclease III [Pyrococcus horikoshii
OT3]
Length = 222
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L + TIE+I + S + + + + VG W++K K
Sbjct: 35 YKTLIRCIISQRNRDEVTDRVSEELFKRYPTIESIASASVEEMQNFLKSLKVGLWRSKGK 94
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S I+ K YN +P+ E L KLPG+G K A++ + + +GI
Sbjct: 95 WIVETSRIILKKYNGRVPDKFEELIKLPGIGRKCANIVLAYGFGI--------------- 139
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+RIS RLG +PE+ + L+S +P
Sbjct: 140 ---------------------PAIPVDTHVYRISRRLGLAPWDASPEEVEERLKSLIPRE 178
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G+ +CK +P C C + LCP+
Sbjct: 179 EWIYVNHAMVDHGKSVCKPIKPRCWECPLRGLCPK 213
>gi|302336472|ref|YP_003801679.1| DNA-(apurinic or apyrimidinic site) lyase [Olsenella uli DSM 7084]
gi|301320312|gb|ADK68799.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Olsenella uli DSM 7084]
Length = 231
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I ++LS+QT D + L T E + LG++I +GFW++KA H
Sbjct: 37 FSLVICVLLSAQTTDVAVNKVTPELFRRWPTPEAMSQADPAELGEVIRTIGFWRSKAAHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS ++ +Y ++P ++E L +LPGVG K A++ +N A+ V GI
Sbjct: 97 VGASQMIVADYGGEVPGSMEELTRLPGVGRKTANIVLNKAFHSVEGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV+RI+ RL T TP ++L +P LW
Sbjct: 145 -----------------------VDTHVYRIATRLRLTSA-PTPLQAERDLLETIPRELW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
VN + FG++ C +Q CE C+ D+CP
Sbjct: 181 GPVNEQWIHFGRETCTAQHAKCEACVAADICPSA 214
>gi|152989812|ref|YP_001355534.1| endonuclease III [Nitratiruptor sp. SB155-2]
gi|151421673|dbj|BAF69177.1| endonuclease III [Nitratiruptor sp. SB155-2]
Length = 221
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 111/244 (45%), Gaps = 43/244 (17%)
Query: 109 HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAA 168
++E++ +R+ K DAP + S P Y +LIS +LS +TKDEV A
Sbjct: 5 QFQEIIKILRDEYKKWDAPAKRLS--QSYTYKRTP----YTILISTLLSFRTKDEVTFDA 58
Query: 169 MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIEL 228
RL ++ + + + I PVGF++ KA+ I+ S L + ++ +P+T+E
Sbjct: 59 AHRLFLLADNPYDMLKVPRETIEQTIYPVGFYRQKARSIQAVSKELTERFDRAVPDTLEA 118
Query: 229 LCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQ 288
L + G+G K A + + +A+G P
Sbjct: 119 LVSIKGIGHKTAKIVLENAFG------------------------------------KPY 142
Query: 289 LCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
+ VD HVHRI + G +P++T K LE L E +N +LV FGQ ICK QRP
Sbjct: 143 VAVDTHVHRICNIWGLVNTV-SPQETDKRLEKMLKEEDKRGLNKILVSFGQTICKPQRPH 201
Query: 349 CETC 352
CE C
Sbjct: 202 CEEC 205
>gi|386867584|ref|YP_006280578.1| EndoIII-related endonuclease [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701667|gb|AFI63615.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. animalis ATCC 25527]
Length = 247
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 50/245 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D+ ++ L + T E + + + + +I P+GF+ KA+HI
Sbjct: 37 FELLVATILSAQTTDKRVNSITPELFDTYPTAEALADARLEDVESIIRPLGFYHVKAEHI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + + ++P T+E L LPGVG K A++ + +A+
Sbjct: 97 IAVARQIVERFGGEVPQTMEELTSLPGVGRKTANVVLGNAF------------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRL----GWTKVFKTPEDTRKELESWLP 323
+P VD HV R++ RL W K TPE +E+ P
Sbjct: 138 -----------------HVPGFPVDTHVIRVTGRLHWRDDWMKANTTPERIEQEITGCFP 180
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ--GKKELA--------ERVKKSP 373
ES W++++H L+ FG+ IC S+ P CETC CP G E+A +R ++ P
Sbjct: 181 ESEWTDLSHRLIIFGRNICTSRSPECETCPLLPTCPSAGGFLEIAAERKARATQRARRKP 240
Query: 374 KKRKS 378
+ RK+
Sbjct: 241 RSRKT 245
>gi|374307877|ref|YP_005054308.1| endonuclease III [Filifactor alocis ATCC 35896]
gi|291166112|gb|EFE28158.1| endonuclease III [Filifactor alocis ATCC 35896]
Length = 211
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ MLS+Q+ D+ + L T + + + SE L +LI +GF+ KAK+I
Sbjct: 28 YELLIATMLSAQSTDKRVNIITKDLFASYNTPDKMVSLSEGELIELIRTIGFYNNKAKNI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
M S IL + Y ++P T E L KLPGVG K A++ +++A+G
Sbjct: 88 LMTSHILLEKYGGEVPKTREELVKLPGVGRKTANVVISNAFG------------------ 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VD HV R+++RLG TK K P ++ S LP+ L+
Sbjct: 130 ------------------IPAFAVDTHVGRVTNRLGLTKS-KNPNQIEIDVTSQLPKKLY 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
++ +HL + G++ CK+ RP C++C
Sbjct: 171 TQAHHLFIFHGRKCCKAIRPLCDSC 195
>gi|337286318|ref|YP_004625791.1| endonuclease III [Thermodesulfatator indicus DSM 15286]
gi|335359146|gb|AEH44827.1| endonuclease III [Thermodesulfatator indicus DSM 15286]
Length = 224
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 36/215 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L + + ++ + L + I GF++ KAK+IK
Sbjct: 45 ELLVATILSAQCTDERVNQVTAELFKKYRSAKDYAEAPLEELAEDIRSTGFYQQKAKYIK 104
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ ++ + + ++P ++E + KLPGV K A++ +++A+G+V GI
Sbjct: 105 ECARLIIEKFGGEVPRSMEDMLKLPGVARKTANIVLSNAYGVVEGIP------------- 151
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R++ RLG+TK K P+ ++L + +P W
Sbjct: 152 ----------------------VDTHVRRLAQRLGFTKE-KKPDKIEQDLMAIIPREEWG 188
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
++ ++ G++ICK+++P C+ C+ KDLCP K+
Sbjct: 189 QIAYVFQAHGRKICKARKPLCDQCVVKDLCPSKKE 223
>gi|229816038|ref|ZP_04446359.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
gi|229808352|gb|EEP44133.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
Length = 220
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I+++LS+QT D + L T E + + + L +I +GF+KTKAKH
Sbjct: 37 FRLVIAVLLSAQTTDAQVNKVTPELFRRWPTPEQMAGATYEELSDVIKSLGFYKTKAKHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +PN ++ L KLPGVG K A++ +N +GIV GI
Sbjct: 97 IACAQMIVADYGGVVPNEMKELVKLPGVGRKTANIVLNVGYGIVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLPES 325
VD HV+RI+HRL + K P T ++L LP
Sbjct: 145 -----------------------VDTHVNRIAHRLKLSPKTHEKEPLKTEQDLLKILPRE 181
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W++VNH + G++IC +++P C C D+CP K
Sbjct: 182 YWNDVNHQWIMLGREICDARKPLCGECPLADICPSAK 218
>gi|406909226|gb|EKD49522.1| hypothetical protein ACD_63C00115G0009 [uncultured bacterium]
Length = 220
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI+ ++S + KDE E + ++ + L K++ P GF++ K+KHI
Sbjct: 32 YKVLIATIVSQRVKDETTEKISRIFFEKYPDVRSLARADLNSLRKILKPAGFFRQKSKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++ L K YN ++P + L KLPGVG K A+ + +A+
Sbjct: 92 KSVAETLLKKYNGNVPRNLPELVKLPGVGRKTANCVLVYAY------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K+P + VD HVHRIS+R+G + K PE+T L +P+ W
Sbjct: 133 -----------------KLPAIPVDTHVHRISNRIGLVRT-KAPEETEFALMKTVPKRYW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N LLV G++ C + P C++C+ + C
Sbjct: 175 IDMNRLLVLHGKKTCLPRGPKCDSCVVAEYC 205
>gi|319956678|ref|YP_004167941.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
gi|319419082|gb|ADV46192.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
Length = 218
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 128 VDAMGWDHSA-NVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTS 186
D WD A + A Y +LIS +LS QT+DEV A RL T E + S
Sbjct: 15 ADYPNWDAPAKRFEKAYRRTPYTILISTLLSFQTRDEVTLEAGKRLFALADTPEAMLGLS 74
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
E+ + + I PVGFW+ KA I + L + + ++P+T+ L + G+GPK A + + +
Sbjct: 75 EEEIARTIYPVGFWRKKAAGILEVTRTLLERHGGEVPSTLSELTAIKGIGPKTAKIVLEN 134
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
A+G Q + + VD HVHRI + LG +
Sbjct: 135 AYG-----------QSVAA-------------------------VDTHVHRILNLLGVVE 158
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+PE T K LE L +N LLV FGQ IC+ + P C C + CP+
Sbjct: 159 T-ASPEATDKALEGLLEPGELKGLNKLLVSFGQAICRPRNPLCSRCPIRSCCPKA 212
>gi|337288175|ref|YP_004627647.1| endonuclease III [Thermodesulfobacterium sp. OPB45]
gi|334901913|gb|AEH22719.1| endonuclease III [Thermodesulfobacterium geofontis OPF15]
Length = 225
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 102/211 (48%), Gaps = 38/211 (18%)
Query: 149 HVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+L++ +LS+Q DE VN K++ T ++ D L + I GF++ KAK+I
Sbjct: 45 QLLVATILSAQCTDERVNEVTKDLFKKYK-TAKDFAEADLDELAEDIKSTGFYRQKAKYI 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K IL + YN ++P T+E L +LPGV K A++ + +A+GIV GI
Sbjct: 104 KECCKILVEKYNGEVPKTMEELLELPGVARKTANIVLANAYGIVEGIP------------ 151
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV +IS RLG K PE KEL +P+ W
Sbjct: 152 -----------------------VDTHVRKISQRLGIVSS-KQPEKMEKELMEIVPKKDW 187
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+L+ G++IC ++P CE C+ KDLC
Sbjct: 188 FAFPYLIQAHGRKICLGRKPKCEECILKDLC 218
>gi|308812275|ref|XP_003083445.1| Endonuclease III (ISS) [Ostreococcus tauri]
gi|116055325|emb|CAL57721.1| Endonuclease III (ISS) [Ostreococcus tauri]
Length = 296
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 43/264 (16%)
Query: 110 WKEVLNNIREMR--KHGDAPVDAMGWDHSANVDIA--PEVRRYHVLISLMLSSQTKDEVN 165
+ E +R+ R K G+A VD HS V +A P+ R + L++ ++S Q D V
Sbjct: 63 FDEAWERLRDWRDGKDGEASVDEF---HSLVVSLAARPQAR-FQCLVAALMSVQCLDRVA 118
Query: 166 HAAMGRLKEH----GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNND 221
A RL++ +TIE + L + + W+ KAK+IK S+ + + +
Sbjct: 119 LRAFQRLRDDHMSGDVTIERVRKMDRATLESALKTLNLWRAKAKYIKECSEAIHFKFRDT 178
Query: 222 IPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRK 281
+P T+ L LPGVG K+AHL V + DES
Sbjct: 179 VPRTVGALKTLPGVGDKLAHL--------VASVSYDES---------------------- 208
Query: 282 CEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQI 341
+ + VD HV R+S RLGW PE R +L++ + W E+ L+ GQ +
Sbjct: 209 -SAQYAGVVVDTHVQRVSRRLGWVGKCDDPERVRMKLQARVHRDDWEELTLGLIALGQNV 267
Query: 342 CKSQRPSCETCLNKDLCPQGKKEL 365
C S+ P+C+ C + CP + +
Sbjct: 268 CHSRNPACDRCPLRTRCPAAPRAV 291
>gi|327401491|ref|YP_004342330.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
gi|327316999|gb|AEA47615.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
Length = 211
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 39/213 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L+ +LSS+T+DE +L E E++ + + +LI VGF++ KA+ +
Sbjct: 32 FQHLVFAVLSSRTRDEQTAKVAKKLFERVKKPEDLATMPVEEIERLIRGVGFYRVKARKL 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + +L + +P+T + L KLPGVG K A++ + A+G IG
Sbjct: 92 KELAKVLVEM--GSVPDTYDELVKLPGVGRKTANVVLASAFG-KAAIG------------ 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHR+S+R+G + K PE+T EL+ +P LW
Sbjct: 137 -----------------------VDTHVHRVSNRMGLVRT-KKPEETENELKKIIPRELW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ VN +VGFGQ +C+ +P C+ C D CP+
Sbjct: 173 TRVNRAMVGFGQTVCRPLKPLCDECPFTDWCPK 205
>gi|448374749|ref|ZP_21558539.1| endonuclease III [Halovivax asiaticus JCM 14624]
gi|445659875|gb|ELZ12677.1| endonuclease III [Halovivax asiaticus JCM 14624]
Length = 227
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E + E+ N ++ L + + + F+ KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFETYQSPEDYANAPQEELAEALNSINFYNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A ++ + ++ ++P+T++ L +LPGVG K A++ + H +V GI
Sbjct: 95 IREACALIVEEHDGEVPDTMDELTELPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIEQDLLDIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HLL+ G+ C ++ P CE+C+ D+CP K +
Sbjct: 179 WVQFTHLLIDHGRATCTARNPDCESCVLADICPSEKGD 216
>gi|288932565|ref|YP_003436625.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
gi|288894813|gb|ADC66350.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
Length = 213
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L+S +LS++T+DE A RL T E++ + + KLI VGF++ KAK +
Sbjct: 30 FKILVSAILSTRTRDEATIEASERLFRVVKTPEDLARMKVEEIEKLIRGVGFYREKAKKL 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K +IL K +N+ +P+ +E L KLPGVG K+A++ + A+G
Sbjct: 90 KKLGEILVKEFNSRVPDKLEDLLKLPGVGRKVANVVLAEAFGK----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HVHRIS+RLG + KTPE+T +EL+ +P+ W
Sbjct: 133 -------------------EAIAVDTHVHRISNRLGLVET-KTPEETEEELKKIVPKKYW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
VN +VGFGQ ICK +P C C ++C GK L
Sbjct: 173 RRVNKAMVGFGQTICKPIKPKCNECKLVEICKYGKSLL 210
>gi|217076701|ref|YP_002334417.1| nth endonuclease III [Thermosipho africanus TCF52B]
gi|217036554|gb|ACJ75076.1| nth endonuclease III [Thermosipho africanus TCF52B]
Length = 203
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ +LS ++KDE A L T + E+ + +LI P G ++ KAK I
Sbjct: 24 FKVLITTVLSQRSKDENTEIAAENLFNKYKTPFELSKAKEEDIYELIKPAGLYRQKAKRI 83
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + Y+ +P+++E L KLPGVG K A++ + ++
Sbjct: 84 IEISKIIVEKYSGIVPDSLEELLKLPGVGRKTANIVLYVSF------------------- 124
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
S+S L VD HVHRIS+RLGW KTPE+T +L LP++LW
Sbjct: 125 ----SKS-------------ALAVDTHVHRISNRLGWVNT-KTPEETEFKLMEILPKNLW 166
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N +V FG+++CK P+C+ C C
Sbjct: 167 GPINGSMVEFGKKVCKPVSPNCKICPISKYC 197
>gi|51893925|ref|YP_076616.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|51857614|dbj|BAD41772.1| endonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 37/225 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D + R+ E+ S D +G++I G WK+KAK+I
Sbjct: 32 FELLVATVLSAQCTDARVNIVTARIFPRYNRPEHFAALSVDEIGEMIRDCGLWKSKAKNI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + + ++P+T+E L +LPGVG K A++ +++A+GI
Sbjct: 92 QGLSQMLLEKHGGEVPSTMEELIQLPGVGRKTANVVLSNAFGI----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++RLG + KTPE+T ++L +P W
Sbjct: 135 -------------------PAIAVDTHVFRVANRLGLAEA-KTPEETERQLMERIPREYW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKS 372
S+ +H L+ G+Q+C ++ P C C C G++ V+++
Sbjct: 175 SQAHHWLIYHGRQVCHARNPQCSQCPLLPHCRFGRQAGKGSVQRA 219
>gi|325290084|ref|YP_004266265.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophobotulus
glycolicus DSM 8271]
gi|324965485|gb|ADY56264.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Syntrophobotulus glycolicus DSM 8271]
Length = 209
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +LS+Q D +A L + + I S+ L +I P+G + KA++I
Sbjct: 32 YQLLIATILSAQCTDIKVNAVTKSLFADYPSAQEIIKLSQTELENIIRPLGLFHNKARNI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL Y ++P+ + L LPGVG K A++ +++A+
Sbjct: 92 LSTSQILLDRYQGEVPSDMASLVSLPGVGRKTANVILSNAFNF----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+S RL T+ KTP +L + +P LW
Sbjct: 135 -------------------PALAVDTHVFRVSRRLDLTR-GKTPHQVELDLTAQIPRDLW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
S+ +HLL+ G++ICK+Q+P+C +C DLCP +
Sbjct: 175 SKTHHLLIWHGRRICKAQKPACPSCPLLDLCPSAQ 209
>gi|210623502|ref|ZP_03293847.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
gi|210153560|gb|EEA84566.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
Length = 213
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D + + + T + + SE+ +G++I G +K+KAK I
Sbjct: 32 FELLVATILSAQCTDVRVNKVTDEMFKVCNTPKQFADLSEEEIGEMIKTCGLYKSKAKKI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
KM S+IL +YN+++P+++E L KLPGVG K A + +++A+G
Sbjct: 92 KMTSEILYNDYNSEVPDSLEELIKLPGVGRKTAGVVLSNAFG------------------ 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RI +R+G + TPE T EL LP+ W
Sbjct: 134 ------------------HPAIPVDTHVFRIVNRIGIVET-STPEKTEFELMKVLPKERW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +HL + G+++CK+++P C C K C
Sbjct: 175 SKAHHLFIFLGRRMCKARKPECTDCPIKKHC 205
>gi|335437705|ref|ZP_08560474.1| endonuclease III [Halorhabdus tiamatea SARL4B]
gi|334894983|gb|EGM33167.1| endonuclease III [Halorhabdus tiamatea SARL4B]
Length = 228
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L++++LS+Q DE + L E T E+ E+VL + I V F KA +
Sbjct: 35 RLELLVAVVLSAQCTDERVNETTPELFEKYQTPEDYATADEEVLAEDIYGVTFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K ++L ++ D+P+T++ L LPGVG K A++ + H +V GI
Sbjct: 95 LKGIGELLVDEHDGDVPDTMDELTDLPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE K+L +PE+
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEA-QRPEAIEKDLMEIIPEAE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL++ G+ +C ++ P C C D+CP +
Sbjct: 179 WQDFTHLMISHGRAVCTARNPDCADCELDDVCPSSR 214
>gi|440783410|ref|ZP_20961128.1| endonuclease III [Clostridium pasteurianum DSM 525]
gi|440219550|gb|ELP58762.1| endonuclease III [Clostridium pasteurianum DSM 525]
Length = 212
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +LS+Q D + +L T E + ++ L ++I P GF+K K+K+I
Sbjct: 30 YELLIATILSAQCTDVRVNIVTEKLFSKYNTPEKMVELTDTELQEIIKPCGFYKNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L NYN+ +P T+E L KLPGVG K A++ M++A+
Sbjct: 90 LATSRELLFNYNSQVPKTMEELTKLPGVGRKTANVVMSNAFN------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+S R+G+ P + +EL +P+++W
Sbjct: 132 ------------------IPAIAVDTHVFRVSKRIGFASG-DNPLEVEQELRKVIPKNMW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ G++ICK+++P CE C + C K+
Sbjct: 173 SNAHHYLIWHGRKICKARKPQCEICPISEYCNYYKENF 210
>gi|448734378|ref|ZP_21716604.1| endonuclease III [Halococcus salifodinae DSM 8989]
gi|445800426|gb|EMA50781.1| endonuclease III [Halococcus salifodinae DSM 8989]
Length = 227
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R+ +L++++LS+Q DE + L E + E N ++ L + + + ++ KA +
Sbjct: 35 RFELLVAVILSAQCTDERVNKTTADLFETYPSPEAFANAPQEELAEALNSITYYNNKASY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ ++ ++ + ++ ++P+T+ L LPGVG K A++ + HA +V GI
Sbjct: 95 IRESAQLVVEEHDGEVPDTMAALTDLPGVGRKTANVVLQHAHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RLG T + PE +L ++PE
Sbjct: 143 -----------------------VVDTHVQRITRRLGLTDE-ERPEKIESDLMGFVPEDR 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
W HL + G+ C ++ P C C +D+CP K++ A
Sbjct: 179 WQAFTHLFISHGRATCTARNPDCADCTLEDVCPSSKRDSA 218
>gi|328956172|ref|YP_004373505.1| DNA-(apurinic or apyrimidinic site) lyase [Coriobacterium glomerans
PW2]
gi|328456496|gb|AEB07690.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Coriobacterium glomerans PW2]
Length = 220
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y ++IS++LS+QT D + L T E + + S + + +I +GF+KTKAKH
Sbjct: 37 YRLVISVLLSAQTTDAQVNRVTPELFARWPTAEALASASPEEVADVIRSLGFYKTKAKHA 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ ++ ++ ++P ++ L +LPGVG K A++ +N ++ IV GI
Sbjct: 97 VEAAQMIVSDFGGEVPADMKQLMRLPGVGRKTANIVLNVSFNIVEGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV--FKTPEDTRKELESWLPES 325
VD HV+RI+HRLG + P T ++L LP
Sbjct: 145 -----------------------VDTHVNRIAHRLGLSPRTHLNDPLKTEQDLLGLLPSQ 181
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W VNH + G++IC ++ P C C D+CP
Sbjct: 182 WWGSVNHQWIKLGREICIARNPRCNLCPLADICPSA 217
>gi|302874216|ref|YP_003842849.1| endonuclease III [Clostridium cellulovorans 743B]
gi|307689520|ref|ZP_07631966.1| endonuclease III [Clostridium cellulovorans 743B]
gi|302577073|gb|ADL51085.1| endonuclease III [Clostridium cellulovorans 743B]
Length = 217
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ M+S+Q+ D + L E+ T E + SE+ L + I G +K+KAK+I
Sbjct: 38 YELLIATMMSAQSTDVRVNIITEDLFENYYTPEQMVTLSEEELQEKIKSCGLYKSKAKNI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN +P +IE L LPGVG K A++ ++ +G
Sbjct: 98 LATSRILIEKYNGQVPKSIEELTTLPGVGKKTANVVASNVFG------------------ 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+++R+G + KTPE ++L +P+ W
Sbjct: 140 ------------------IPAIAVDTHVFRVANRIGIAE-GKTPEKVEEQLMEAIPKEKW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H L+ G++ICK+++P CE C K C
Sbjct: 181 SDSHHYLIWHGRRICKARKPECEVCNLKYEC 211
>gi|148264846|ref|YP_001231552.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
gi|146398346|gb|ABQ26979.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
Length = 218
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S +LS +T+D+ AA RL T ++ + + K I PVGF++ KA I
Sbjct: 36 FKVLVSCILSLRTQDKTTAAASERLFALAGTPSDLGTLPTETIEKAIYPVGFYRVKAAQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S ++++ Y +P+ I+ L GVG K A+L + +G
Sbjct: 96 KDISRLIQEKYAGRVPDEIDELLTFKGVGRKTANLVVTLGYGK----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRI +R G+ + KTPE T L LP W
Sbjct: 139 -------------------PGICVDTHVHRICNRWGYVQT-KTPEQTEFALRGKLPRDYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV FGQ C P C TC +C
Sbjct: 179 LVINDLLVTFGQNQCLPVSPLCSTCPLAKMC 209
>gi|313673731|ref|YP_004051842.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312940487|gb|ADR19679.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 210
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y + IS +LS+Q DE+ + L + ++ N + L ++I P GF+ KAK I
Sbjct: 31 YELAISTILSAQCTDEMVNKITPSLFQQYPDFFSLSNADIEHLKQIIKPTGFYNNKAKSI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +NY ++P +E+L KLPG+G K A++ ++ +G +GI
Sbjct: 91 LSLAKVVVENYKGELPLEMEILVKLPGIGRKTANVILSE-YGTPSGI------------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T + P K+L S +PE W
Sbjct: 137 ----------------------VVDTHVARVSKRLGLT-TYDDPIKIEKDLISLIPEDRW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
+++H ++ FG+QICK+++P C C +D C K++
Sbjct: 174 GKISHQIIHFGRQICKARKPECSNCEMRDFCSYYKQQ 210
>gi|300857069|ref|YP_003782053.1| endonuclease III [Clostridium ljungdahlii DSM 13528]
gi|300437184|gb|ADK16951.1| endonuclease III [Clostridium ljungdahlii DSM 13528]
Length = 214
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L+S MLS+Q D + L + T E + + +E+ LG+ I GF++ K+K+I
Sbjct: 30 YELLVSTMLSAQCTDVRVNKVTSELYKQYNTPEKMISLTEEELGEKIKSCGFFRNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L + Y+ ++P+T+E L +LPGVG K A + +++A+G
Sbjct: 90 LATSRELVEKYDGEVPHTMEQLIELPGVGRKTADVVLSNAFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S+RLG K TP EL +P+S+W
Sbjct: 132 ------------------VPAIAVDTHVFRVSNRLGIAK-GTTPHKVEMELMKNIPKSMW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H L+ G++ICKS++P CE C C
Sbjct: 173 SDSHHYLIWHGRRICKSRKPDCEHCPLAPYC 203
>gi|114566493|ref|YP_753647.1| endonuclease III [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337428|gb|ABI68276.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 207
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +++++LS+Q+ DE VN ++G T E + +L + I VG ++ KA+H
Sbjct: 28 FQFMVAVVLSAQSTDEQVNRVTAELFADYG-TPEALAAIDLSLLEEKIRGVGLYRNKARH 86
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K + I+ + Y ++P+ + L LPGVG K A++
Sbjct: 87 LKKMAQIIVEQYQGEVPSDFDELLSLPGVGRKSANV------------------------ 122
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+R K P L VD HVHR+++RLG K PE T K L+ +PE
Sbjct: 123 ------------IRSVVFKKPGLGVDTHVHRVANRLGLVNS-KLPEQTEKALKEQIPEKC 169
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
WSE +HLL+ G++IC++++P C C+ + LC
Sbjct: 170 WSEAHHLLIFHGRRICQARKPQCNNCVLEGLC 201
>gi|448739187|ref|ZP_21721202.1| endonuclease III [Halococcus thailandensis JCM 13552]
gi|445799782|gb|EMA50151.1| endonuclease III [Halococcus thailandensis JCM 13552]
Length = 228
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 128 VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSE 187
+DA D + ++D + R+ +L++++LS+Q D + L E + E N +
Sbjct: 19 LDAEYPDTTISLDFS---NRFELLVAVILSAQCTDARVNETTDELFESYPSPEAFANAPQ 75
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
+ L + + + ++ KA +I+ ++ I+ + Y+ D+P+T+ L +LPGVG K A++ + H
Sbjct: 76 EELAEALNSITYYNNKASYIRESAQIVVEEYDGDVPDTMGELTELPGVGRKTANVVLQHG 135
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV 307
+ +V GI VD HV R++ RLG T+
Sbjct: 136 YDVVEGI-----------------------------------VVDTHVQRLTRRLGLTEE 160
Query: 308 FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ PE ++L ++P W HL + G+ C ++ P C C+ +D+CP K
Sbjct: 161 -QRPERIEEDLMEFVPAERWQAFTHLFIDHGRATCTARNPECGDCVLEDICPSSK 214
>gi|389852800|ref|YP_006355034.1| endonuclease III [Pyrococcus sp. ST04]
gi|388250106|gb|AFK22959.1| endonuclease III [Pyrococcus sp. ST04]
Length = 216
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L + ++E+I S + + + + + +G WKTK +
Sbjct: 34 YRTLIKCIISQRNRDEVTDRVAEELFKRYPSMEDIARASIEEMQEFLKNLGIGLWKTKGR 93
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I ++ I+ + Y +PNT+E L KLPG+G K A++ + + +GI
Sbjct: 94 WIVESTRIILEKYGGVVPNTLEELMKLPGIGRKCANIVLAYGFGI--------------- 138
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+R+S RLG TPE + L+ LP+
Sbjct: 139 ---------------------PAIPVDTHVNRVSKRLGLVPPNATPEKVEEILKKLLPKD 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G+ +C+ +P C+ C +D+CP+
Sbjct: 178 EWLYVNHAMVDHGKAVCRPIKPKCDECPLRDICPK 212
>gi|406981558|gb|EKE03014.1| Endonuclease III [uncultured bacterium]
Length = 257
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL++ +LS + DE+ RL + T E+I + + L +I P+ F ++KA++I
Sbjct: 69 FKVLVACILSIRNLDEITFPVADRLFQIADTPEDIVDLPIERLKAIIKPINFSESKAENI 128
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S I+ + N ++P T+E L GVG K A+L V +G +
Sbjct: 129 KKISKIILEQLNGEVPATMEGLLAFYGVGRKTANL--------VLSLGHN---------- 170
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HVH++++RLG+ K KTPE T L+ LP+ W
Sbjct: 171 ------------------IPAIAVDTHVHKVTNRLGYVKT-KTPEQTETALKEKLPQPYW 211
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++N L V G+QICK+ RP C+ C D C Q
Sbjct: 212 IKINPLFVTHGKQICKTGRPWCDICPIIDYCNQ 244
>gi|118577076|ref|YP_876819.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
gi|118195597|gb|ABK78515.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
Length = 277
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++T+DE + L T + + +++ P+GF++ K++ I
Sbjct: 34 FSILIGTILSARTRDESTTKVVKELFARYKTPRELARARHRDVERIVKPIGFYRVKSRRI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I+ Y +P+ +E L LPGVG K A+ + +A+
Sbjct: 94 MEVARIIDTKYGGRVPDDLETLVGLPGVGRKTANCVLVYAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK P + VD+HVHRIS+RLG +TPE+T L +P+ W
Sbjct: 135 ---------------EK--PAIPVDIHVHRISNRLGLVDT-RTPEETEAALTKKVPKRHW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
VN + V +GQ ICK P CE C + LC
Sbjct: 177 LHVNDIFVMYGQNICKPVSPMCEVCGIRSLC 207
>gi|240103334|ref|YP_002959643.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
gi|239910888|gb|ACS33779.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
Length = 230
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLII--PVGFWKTKAK 205
Y LI ++S + +DEV + L + IE I NT D + + + VG WKTK +
Sbjct: 41 YRTLIHCIISQRMRDEVTYRVWEELFKKYGDIETIANTPVDEMREFLRKRGVGLWKTKGE 100
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + Y +P+ I+ L KLPG+G K A++ + + +G
Sbjct: 101 WIVKASRIILEKYGGKVPDDIKELMKLPGIGRKCANIVLAYGFG---------------- 144
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
+ IP VD HV+RIS RLG PE + L +P+
Sbjct: 145 -----------------RQAIP---VDTHVNRISKRLGLAPPRVPPEKVEEYLMELIPKE 184
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ IC+ RP CE+C K+LCP K
Sbjct: 185 KWIYVNHAMVDHGRSICRPIRPKCESCPLKELCPYAK 221
>gi|448729244|ref|ZP_21711562.1| endonuclease III [Halococcus saccharolyticus DSM 5350]
gi|445795639|gb|EMA46163.1| endonuclease III [Halococcus saccharolyticus DSM 5350]
Length = 227
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 36/220 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R+ +L++++LS+Q DE + L E + E N ++ L + + + ++ KA +
Sbjct: 35 RFELLVAVILSAQCTDERVNETTADLFETYSSPEAFANAPQEELAEALNSITYYNNKASY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ ++ I+ ++ ++P+T+ L LPGVG K A++ + H +V GI
Sbjct: 95 IRESAQIVVDEHDGEVPDTMTELTDLPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RLG T K PE +L +++PE
Sbjct: 143 -----------------------VVDTHVQRITRRLGLTDE-KRPEKIETDLMAFVPEDR 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
W HL + G+ C ++ P C C +D+CP K + A
Sbjct: 179 WQAFTHLFISHGRATCTARNPDCADCTLEDICPSSKADSA 218
>gi|409728373|ref|ZP_11271240.1| endonuclease III [Halococcus hamelinensis 100A6]
gi|448722930|ref|ZP_21705458.1| endonuclease III [Halococcus hamelinensis 100A6]
gi|445788597|gb|EMA39306.1| endonuclease III [Halococcus hamelinensis 100A6]
Length = 227
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R+ +L++++LS+Q DE + L E + E N +D L + + + ++ KA +
Sbjct: 35 RFELLVAVILSAQCTDERVNETTETLFETYPSPEAFANAPQDELAEALNSITYYNNKASY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ ++ ++ ++ ++P+T+ L +LPGVG K A++ + HA +V G+
Sbjct: 95 IRESAQLVVDEHDGEVPDTMGDLTELPGVGRKTANVVLQHAHDVVEGV------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEEHR-PETIERELMELFPEER 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
W HL + G++ C ++ P CE C+ + +CP K + A
Sbjct: 179 WQASTHLFISHGRETCTARNPDCEDCVLEAICPSSKLDSA 218
>gi|389846287|ref|YP_006348526.1| endonuclease III [Haloferax mediterranei ATCC 33500]
gi|448616095|ref|ZP_21664805.1| endonuclease III [Haloferax mediterranei ATCC 33500]
gi|388243593|gb|AFK18539.1| endonuclease III [Haloferax mediterranei ATCC 33500]
gi|445750750|gb|EMA02187.1| endonuclease III [Haloferax mediterranei ATCC 33500]
Length = 227
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 38/219 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E E+ N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKVTAELFEKYDDAEDYANAEQEALAEDINSITYYNNKAKY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I+ A SDI++K ++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACSDIIEK-HDGEVPDTMSELTDLAGVGRKTANVVLQHGHDIVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T+ ++P+ +L +PE
Sbjct: 143 ------------------------VVDTHVQRLSRRLGLTE-EESPKRIETDLMPVVPEM 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W ++ HL + G+ +C ++ P C+ C+ +D+CP K E
Sbjct: 178 DWQQLTHLFISHGRAVCSARNPDCDVCVLEDICPSSKLE 216
>gi|392426401|ref|YP_006467395.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Desulfosporosinus acidiphilus SJ4]
gi|391356364|gb|AFM42063.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Desulfosporosinus acidiphilus SJ4]
Length = 215
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q DE + L E T E+I L I +G + KAK I
Sbjct: 34 FELLIATILSAQCTDERVNQVTASLFEAANTPEDILALGLSSLEGKIRSLGLFHNKAKSI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + Y+ +P +I+LL KLPGVG K A++ +++A+GI
Sbjct: 94 LATSQILVEKYSGIVPESIDLLRKLPGVGRKTANVVVSNAYGI----------------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++HR+G + T E KEL P W
Sbjct: 137 -------------------PAIAVDTHVFRVAHRIGLAEG-STAEKVEKELMEQFPREQW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
S+++HLL+ G++IC +++P+C C +C K
Sbjct: 177 SDLHHLLIFLGRRICTARKPNCPACPVASVCKMAK 211
>gi|448299418|ref|ZP_21489430.1| endonuclease III [Natronorubrum tibetense GA33]
gi|445588008|gb|ELY42257.1| endonuclease III [Natronorubrum tibetense GA33]
Length = 227
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N ++D L + + + ++ +KA++
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKTLFEKYDGAEDYANAAQDELAEDLNSITYYNSKAEY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + +I+ + ++ ++P+T++ L +L GVG K A++ + H IV GI
Sbjct: 95 IRTSCEIILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-QRPEAIEQELMELVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ IC ++ P C C+ D+CP K
Sbjct: 179 WQQFTHLCIDHGRAICDARNPDCADCVLADICPSEK 214
>gi|339008005|ref|ZP_08640579.1| putative endonuclease III [Brevibacillus laterosporus LMG 15441]
gi|338775208|gb|EGP34737.1| putative endonuclease III [Brevibacillus laterosporus LMG 15441]
Length = 221
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 38/227 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D+ + L + T E+ S + L I +G +K KAKHI
Sbjct: 30 FELTIAVLLSAQCTDKKVNQVTEHLFQKYKTPEDYLKVSLEELQDDIRQIGLYKNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + Y ++PN E L KLPGVG K A++ ++ A+G+
Sbjct: 90 QSLCRLLLEEYGGEVPNKHEELVKLPGVGRKTANVVVSVAFGV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG+ TP + L +P+ W
Sbjct: 133 -------------------PAIAVDTHVERISKRLGFCPDDATPVQVEEILMKKIPKKDW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
S+ +H ++ FG+ CK+Q P C+ C +D+CP KK A +V K PK
Sbjct: 174 SDTHHRMIFFGRYHCKAQSPQCDICPLEDVCPTRKK--ARKVNKKPK 218
>gi|257783933|ref|YP_003179150.1| endonuclease III [Atopobium parvulum DSM 20469]
gi|257472440|gb|ACV50559.1| endonuclease III [Atopobium parvulum DSM 20469]
Length = 223
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS+MLS+QT D + L ++ + +G++I +GFW+ KAKH
Sbjct: 37 FTLLISVMLSAQTTDAAVNKVTPELFRRWPDAPSMAAANIVEVGEVIQTIGFWRAKAKHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL Y ++P T+E L LPGVG K A++ +N + +V GI
Sbjct: 97 VETAQILLTEYGGEVPGTMEDLVTLPGVGRKTANIVLNKMFNVVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV+RIS R+ + TP K+L + LP LW
Sbjct: 145 -----------------------VDTHVYRISKRMRLSSA-STPLAAEKDLLALLPHELW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+VN + FG++ C ++ P C C D+CP
Sbjct: 181 KDVNEEWIHFGRETCTARNPKCVGCPMSDICPS 213
>gi|390961830|ref|YP_006425664.1| hypothetical protein CL1_1673 [Thermococcus sp. CL1]
gi|390520138|gb|AFL95870.1| hypothetical protein CL1_1673 [Thermococcus sp. CL1]
Length = 238
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP--VGFWKTKAK 205
Y L+ ++S + +DEV + G L E IE I NT + + + + VG WKTK +
Sbjct: 49 YRTLVHCIISQRMRDEVTYRVWGELFERYRDIETIANTPVEEMQRFLRERGVGLWKTKGE 108
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + Y +P+ I L KLPG+G K A++ + + +G
Sbjct: 109 WIVKASRIILEEYGGKVPDDIHELMKLPGIGRKCANIVLAYGFG---------------- 152
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L +P
Sbjct: 153 -----------------KQAIP---VDTHVNRISKRLGLAPPRVPPEKVEEYLRELIPRE 192
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ IC RP C C K+LCP K
Sbjct: 193 KWIYVNHAMVDHGKNICNPIRPKCGECPLKELCPYAK 229
>gi|383458979|ref|YP_005372968.1| base excision DNA repair protein [Corallococcus coralloides DSM
2259]
gi|380733644|gb|AFE09646.1| base excision DNA repair protein [Corallococcus coralloides DSM
2259]
Length = 254
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 120/284 (42%), Gaps = 51/284 (17%)
Query: 78 GKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNIR-EMRKHGDAPVDAMGWDHS 136
G R + Q+ P + D P +EVL +R E+R DA + +
Sbjct: 14 GPRRAPRSQSARTVHAAPSDTDKL-----PFDTEEVLRRVRHEVRSFADAAMFELAAKGH 68
Query: 137 ANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP 196
++ + LI+ +LS +T DEV+ A RL T E + + + LI P
Sbjct: 69 GSL--------FEQLIACILSIRTLDEVSLPASLRLLGRAHTPEALARLTPAEIDALIRP 120
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
V F + KA + + + +N +P ++L GVGPK AHL A GI G
Sbjct: 121 VTFHEGKAHQVHAIAVRTRDEFNGQLPADPDVLQSFKGVGPKCAHL----ALGIACG--- 173
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK 316
E+I V D+HVHR+++R G+ K TPE T
Sbjct: 174 -----------------HEVISV------------DIHVHRVTNRWGYVKA-STPERTLA 203
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
LE+ LP W E+N LLV FG+ +C RP C TC C Q
Sbjct: 204 ALEAVLPRPYWVELNRLLVPFGKHVCTGTRPKCSTCPVLPYCRQ 247
>gi|390559245|ref|ZP_10243597.1| DNA-(Apurinic or apyrimidinic site) lyase [Nitrolancetus
hollandicus Lb]
gi|390174172|emb|CCF82890.1| DNA-(Apurinic or apyrimidinic site) lyase [Nitrolancetus
hollandicus Lb]
Length = 220
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 136 SANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKL 193
+A ++A E R + L++ M+S +T DEV R T ++ + + L
Sbjct: 24 AALFELADEGYRTPFEQLVACMISIRTLDEVTLPTARRFFARARTPHDVSRIPAEEIAAL 83
Query: 194 IIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTG 253
I P F++TKA+ I + ++N IP ++L PGVGPK C N +V
Sbjct: 84 IRPSTFYETKARQILEIAHRAVADFNGCIPCADDVLRSFPGVGPK----CTN----LVLA 135
Query: 254 IGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPED 313
I D+ P++ VDVHVHR+++R G+ +TPE
Sbjct: 136 IACDQ----------------------------PRISVDVHVHRVTNRWGYVHT-RTPEQ 166
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
T LE+ LP W ++N LLV FG+ +C ++ P C TC D+C Q
Sbjct: 167 TMAALEAKLPPRFWVDINRLLVPFGKHVCTARLPRCSTCPVLDMCQQ 213
>gi|269986417|gb|EEZ92704.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 229
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI +LS++TKD A RL T E I + + KLI PVGF+ TKAK +
Sbjct: 30 FEVLIHGILSTRTKDTTTFPAQKRLLAVADTPEKIIKLPINQIEKLIYPVGFFHTKAKLV 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A ++L K +N+ +P+T E L +PGVG K+A L + WG
Sbjct: 90 KSACNVLIKEFNSKVPSTKEKLMTIPGVGNKVASLVLE--WGF----------------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV+RIS RLG PE T LES L L
Sbjct: 131 -----------------NLPYIAVDTHVNRISQRLGIVPEGTKPEKTELILESILNPKLR 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
N+ V FG++IC+ P C C C
Sbjct: 174 ITTNYSFVKFGREICRPINPLCGKCPVYSYC 204
>gi|345303642|ref|YP_004825544.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
gi|345112875|gb|AEN73707.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
Length = 280
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 38/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTS-EDVLGKLIIPVGFWKTKAKH 206
Y +L+++MLS+Q D + L T+E + EDVL I V + +KA+H
Sbjct: 31 YQLLVAVMLSAQCTDARVNQVTPALFAAFPTVEALAAAEPEDVL-PYIRSVSYPNSKARH 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ A+ ++ + +IP+++E L LPGVGPK A + + A+G+
Sbjct: 90 LVAAARRIRDAFGGEIPDSLEALESLPGVGPKTARVVASVAFGVAA-------------- 135
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
L VD HV+R++HR+G + +TP + + L+ LP
Sbjct: 136 ----------------------LPVDTHVYRVAHRIGLVRRARTPLEVERRLKRQLPARD 173
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W E +HLL+ G+ C +++P C+ C+ DLC
Sbjct: 174 WGEAHHLLILHGRYTCTARQPHCDRCVLTDLC 205
>gi|385802943|ref|YP_005839343.1| DNA-(apurinic or apyrimidinic site) lyase [Haloquadratum walsbyi
C23]
gi|339728435|emb|CCC39587.1| endonuclease III [Haloquadratum walsbyi C23]
Length = 228
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE ++ L E T + D L + I + F KA +
Sbjct: 35 RLELLIAVVLSAQCTDERVNSITADLFEKYETATDYAAADTDELAEDIYGITFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K + L +Y+ D+P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 LKSIGETLASDYDGDVPDTMDELTALSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RLG T +TP+ +L +PES
Sbjct: 143 -----------------------VVDTHVQRITRRLGLTDE-QTPKQIETDLMESVPESE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G++ C +Q P C C+ + +CP K
Sbjct: 179 WQQFTHLFISHGRETCTAQNPDCTDCILESVCPSSK 214
>gi|157364361|ref|YP_001471128.1| endonuclease III [Thermotoga lettingae TMO]
gi|157314965|gb|ABV34064.1| endonuclease III [Thermotoga lettingae TMO]
Length = 217
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI+ +LS +TKDE A +L E + ++ + LI G ++ KA+ I
Sbjct: 30 FRVLIATILSQRTKDENTDKASKKLFESFPDVYSLSMAKPSQIYDLIKASGMYRQKAERI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S I+ + +N IP + L LPGVG K A++ + H +
Sbjct: 90 IKVSQIIVEKFNGKIPANLHDLLSLPGVGRKTANIVLYHCF------------------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
C+ P L VD HVHRIS+RLG+ K KTPE T + L+ +PE W
Sbjct: 131 --------------CQ---PALAVDTHVHRISNRLGFVKT-KTPEQTEEGLKKIIPEKFW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N +V FG+++C ++P C+ C C
Sbjct: 173 GPINGAMVEFGKKVCLPRKPKCQECPVNKYC 203
>gi|421874622|ref|ZP_16306225.1| endonuclease III [Brevibacillus laterosporus GI-9]
gi|372456478|emb|CCF15774.1| endonuclease III [Brevibacillus laterosporus GI-9]
Length = 190
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 152 ISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMAS 211
I+++LS+Q D+ + L + T E+ S + L I +G +K KAKHI+
Sbjct: 3 IAVLLSAQCTDKKVNQVTEHLFQKYKTPEDYLKVSLEELQDDIRQIGLYKNKAKHIQSLC 62
Query: 212 DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQI 271
+L + Y ++PN E L KLPGVG K A++ ++ A+G+
Sbjct: 63 RLLLEEYGGEVPNKHEELVKLPGVGRKTANVVVSVAFGV--------------------- 101
Query: 272 SRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVN 331
P + VD HV RIS RLG+ TP + L +P+ WS+ +
Sbjct: 102 ---------------PAIAVDTHVERISKRLGFCPDDATPVQVEEILMKKIPKKDWSDTH 146
Query: 332 HLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPK 374
H ++ FG+ CK+Q P C+ C +D+CP KK A +V K PK
Sbjct: 147 HRMIFFGRYHCKAQSPQCDICPLEDVCPTRKK--ARKVNKKPK 187
>gi|110667504|ref|YP_657315.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
gi|109625251|emb|CAJ51673.1| endonuclease III [Haloquadratum walsbyi DSM 16790]
Length = 228
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE ++ L E T + D L + I + F KA +
Sbjct: 35 RLELLIAVVLSAQCTDERVNSITADLFEKYETATDYAAADTDELAEDIYGITFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K + L +Y+ D+P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 LKSIGETLAADYDGDVPDTMDELTALSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RLG T +TP+ +L +PES
Sbjct: 143 -----------------------VVDTHVQRITRRLGLTDE-QTPKQIETDLMESVPESE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G++ C +Q P C C+ + +CP K
Sbjct: 179 WQQFTHLFISHGRETCTAQNPDCTDCILESVCPSSK 214
>gi|355571898|ref|ZP_09043106.1| endonuclease III [Methanolinea tarda NOBI-1]
gi|354824994|gb|EHF09229.1| endonuclease III [Methanolinea tarda NOBI-1]
Length = 225
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++T D +A RL +++ N + +I P+GF++ K+++I
Sbjct: 33 FQILILTILSARTTDRSVNAIRDRLFSRYPEPKDLANADPRDVEDIIHPLGFYREKSQNI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L + + +P+ ++ L LPGVG K A++ ++HA+GI G+
Sbjct: 93 IKTSRALIERFGGRVPDRMDDLLTLPGVGRKTANIVLDHAFGIHDGV------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG++ K P ++L + P+S W
Sbjct: 140 ----------------------AVDTHVARLSRRLGFSSG-KDPARIERDLMALFPQSAW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+N+LL+ G+ C +++PSC TC LCP
Sbjct: 177 GNLNYLLIRHGRTTCTARKPSCTTCPLGSLCPSA 210
>gi|406983688|gb|EKE04848.1| hypothetical protein ACD_19C00429G0008 [uncultured bacterium]
Length = 218
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 106/221 (47%), Gaps = 55/221 (24%)
Query: 121 RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIE 180
R + P++A G D Y LIS +LS++TKDE+ A RL + +
Sbjct: 35 RNYILVPLEAFGKDP------------YKTLISTILSARTKDEITLEASKRLFKMAANFK 82
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHI-KMASDILKKNYNNDIPNTIELLCKLPGVGPKM 239
I E + LI PVGF+KTKAKH+ K+A +++ +PNT E L KLPGVG K
Sbjct: 83 KIDQLDELEIRNLIYPVGFYKTKAKHLFKIA-----RSHLAIVPNTREELMKLPGVGRKT 137
Query: 240 AHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRIS 299
A+L +N A+G IP + VD HVHRI
Sbjct: 138 ANLVLNRAFG------------------------------------IPAIAVDTHVHRIC 161
Query: 300 HRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQ 340
+ LGW K KTP++T +L +P+ WS +N L V G+Q
Sbjct: 162 NILGWVKT-KTPKETEIKLIKIIPKKYWSNLNRLFVSIGRQ 201
>gi|268317390|ref|YP_003291109.1| endonuclease III [Rhodothermus marinus DSM 4252]
gi|262334924|gb|ACY48721.1| endonuclease III [Rhodothermus marinus DSM 4252]
Length = 267
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 38/210 (18%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTS-EDVLGKLIIPVGFWKTKAKHIK 208
+L+++MLS+Q D + L T+E + EDVL I V + +KA+H+
Sbjct: 20 LLVAVMLSAQCTDARVNQVTPALFAAFPTVEALAAAEPEDVL-PYIRSVSYPNSKARHLV 78
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A+ ++ + +IP ++E L LPGVGPK A + + A+G+
Sbjct: 79 AAARRIRDAFGGEIPASLEALESLPGVGPKTARVVASVAFGVAA---------------- 122
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
L VD HV+R++HR+G + +TP + + L+ LP W
Sbjct: 123 --------------------LPVDTHVYRVAHRIGLVRRARTPLEVERRLKRQLPARDWG 162
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
E +HLL+ G+ C ++RP CE C+ DLC
Sbjct: 163 EAHHLLILHGRYTCTARRPHCERCVLTDLC 192
>gi|14520880|ref|NP_126355.1| endonuclease III [Pyrococcus abyssi GE5]
gi|5458097|emb|CAB49586.1| nth endonuclease III [Pyrococcus abyssi GE5]
gi|380741424|tpe|CCE70058.1| TPA: endonuclease III [Pyrococcus abyssi GE5]
Length = 222
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L + +IE I + S + + + + VG W++K K
Sbjct: 35 YKTLIRCIISQRNRDEVTDRVSEELFKRYPSIEAIASASVEEMQNFLRSLKVGLWRSKGK 94
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S I+ + Y +P+ E L KLPG+G K A++ + + +GI
Sbjct: 95 WIVETSRIILEKYKGRVPDKFEELIKLPGIGRKCANIVLAYGFGI--------------- 139
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+RIS RLG +PE+ + L+ +P
Sbjct: 140 ---------------------PAIPVDTHVYRISRRLGLAPWDASPEEVEERLKELIPRE 178
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G+ +C+ +P C+ C K+LCP+
Sbjct: 179 EWIYVNHAMVDHGKSVCRPIKPRCDECPLKELCPR 213
>gi|149052033|gb|EDM03850.1| nth (endonuclease III)-like 1 (E.coli) (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 120
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 288 QLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
Q VD HVHRI++RL WTK + K+PE+TR+ LE WLP LWSE+N LLVGFGQQIC
Sbjct: 43 QAAVDTHVHRIANRLKWTKKMTKSPEETRRNLEEWLPRVLWSEINGLLVGFGQQICLPVH 102
Query: 347 PSCETCLNKDLCPQGK 362
P C+ CLNK LCP +
Sbjct: 103 PRCQACLNKALCPAAQ 118
>gi|307352991|ref|YP_003894042.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
gi|307156224|gb|ADN35604.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
Length = 215
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 134 DHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKL 193
D N++ + +L+ +LS+QT D + ++ L + ++ + +
Sbjct: 19 DEDTNLNFLDFDNPFQILVMTILSAQTTDNMVNSVKDDLFSKYPDPAALSQAKQEDVETI 78
Query: 194 IIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTG 253
I GF++ KAK+I +S IL ++ ++P T+E L LPGVG K A++ +NHA+GI G
Sbjct: 79 IKKTGFFRAKAKNIIESSKILCSDFGGEVPRTMEELVTLPGVGRKTANIVLNHAFGIDEG 138
Query: 254 IGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPED 313
I VD HV R+S R+G T P
Sbjct: 139 IA-----------------------------------VDTHVKRVSWRIGLTDN-TDPVK 162
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+L + P+ W ++N+LL+ G+ IC +++P CE C+ KD C
Sbjct: 163 IEMDLTALFPKDAWGKMNYLLISHGRAICTARKPDCERCVIKDFC 207
>gi|183602757|ref|ZP_02964120.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219683144|ref|YP_002469527.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|241191477|ref|YP_002968871.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196882|ref|YP_002970437.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194472|ref|YP_005580218.1| endonuclease III [Bifidobacterium animalis subsp. lactis BLC1]
gi|384196038|ref|YP_005581783.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis V9]
gi|387821338|ref|YP_006301381.1| Endonuclease III [Bifidobacterium animalis subsp. lactis B420]
gi|387823021|ref|YP_006302970.1| Endonuclease III [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423680007|ref|ZP_17654883.1| endonuclease III [Bifidobacterium animalis subsp. lactis BS 01]
gi|183217995|gb|EDT88643.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219620794|gb|ACL28951.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|240249869|gb|ACS46809.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251436|gb|ACS48375.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794469|gb|ADG34004.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis V9]
gi|345283331|gb|AEN77185.1| endonuclease III [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041006|gb|EHN17519.1| endonuclease III [Bifidobacterium animalis subsp. lactis BS 01]
gi|386654039|gb|AFJ17169.1| Endonuclease III [Bifidobacterium animalis subsp. lactis B420]
gi|386655629|gb|AFJ18758.1| Endonuclease III [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 247
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 47/242 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D+ ++ L T + + + + +I P+GF+ KA+HI
Sbjct: 37 FELLVATILSAQTTDKRVNSITPELFGTYPTAAALADARLEDVESIIRPLGFYHVKAEHI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + + IP T+E L LPGVG K A++ + +A+
Sbjct: 97 IAVARQIVERFGGQIPQTMEELTSLPGVGRKTANVVLGNAF------------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRL----GWTKVFKTPEDTRKELESWLP 323
++P VD HV R++ RL W K TPE +E+ P
Sbjct: 138 -----------------RVPGFPVDTHVIRVTGRLHWRDDWMKTSTTPERIEQEITGCFP 180
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL---AER----VKKSPKKR 376
ES W++++H L+ FG+ IC S+ P CE C CP + L AER +++P+K
Sbjct: 181 ESEWTDLSHRLIIFGRNICTSRSPECENCPLLPTCPSAGEFLEIAAERKARATRRAPRKP 240
Query: 377 KS 378
+S
Sbjct: 241 RS 242
>gi|210631996|ref|ZP_03297161.1| hypothetical protein COLSTE_01054 [Collinsella stercoris DSM 13279]
gi|210159798|gb|EEA90769.1| endonuclease III [Collinsella stercoris DSM 13279]
Length = 220
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I+++LS+QT D + L T E + + + L +I +GF+KTKAKH
Sbjct: 37 FRLVIAVLLSAQTTDAQVNKVTPELFRRWPTPEAMAGATYEELSGVIKSLGFYKTKAKHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +P ++ L KLPGVG K A++ +N +GIV GI
Sbjct: 97 IECAQMIVADYGGVVPADMKELVKLPGVGRKTANIVLNVGYGIVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVF--KTPEDTRKELESWLPES 325
VD HV+RI+HRL + K P T ++L LP
Sbjct: 145 -----------------------VDTHVNRIAHRLKLSPKTHEKEPLKTEQDLLKILPRE 181
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W++VNH + G++IC +++P C C D+CP K
Sbjct: 182 YWNDVNHQWIMLGREICDARKPLCGECPLADICPSAK 218
>gi|288560832|ref|YP_003424318.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
gi|288543542|gb|ADC47426.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
Length = 215
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +T+DE A L E I + + + + +LI P GF++ KA I
Sbjct: 34 YKVLIRTILSQRTRDENTDQAANALFEVYPDIYAVADAPVEHVQELIKPAGFYRVKAARI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL Y ++P ++ + KLPGVG K A+ + A+
Sbjct: 94 LEVSRILIDQYGGEVPREMDEMLKLPGVGRKTANCVIVFAFQ------------------ 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ IP VD HVHRIS+R G K PE+T + L +P+ LW
Sbjct: 136 ---------------DAAIP---VDTHVHRISNRWGIADT-KDPEETEQVLMEKVPKDLW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N L+V FGQ IC+ P C+ C DLC
Sbjct: 177 VDLNDLMVQFGQTICRPIGPQCDKCPISDLC 207
>gi|253700536|ref|YP_003021725.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
gi|251775386|gb|ACT17967.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
Length = 220
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 132 GWDHSANVDIAPEVRR-YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVL 190
GW A +A + R Y VL+S +LS +T+D+ A RL T + + S +
Sbjct: 21 GWVTPAVTIVATQDRDPYKVLVSCILSLRTRDQTTAEASQRLFALADTPQKMAELSVPEI 80
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
+ I PVGF++ KA+ I S +++ Y +P+ +E L GVG K A+L + +G
Sbjct: 81 EQAIYPVGFYRVKAQQILELSFQIRELYQGRVPDELETLLTFKGVGRKTANLVLTLGYGK 140
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
P +CVD+HVHRI +R G+ K T
Sbjct: 141 ------------------------------------PGICVDIHVHRICNRWGYVKT-GT 163
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
PE T L LP W +N LLV FGQ C P C C LC
Sbjct: 164 PEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSNCPLYALC 211
>gi|237756075|ref|ZP_04584653.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691768|gb|EEP60798.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 209
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 50/250 (20%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE-VNHAAMGRLKEH 175
I ++KH P + +++ + +LI+++LS+QT D+ VN + K++
Sbjct: 9 IERLKKHFPDPKIELNYEN-----------EFQLLIAIILSAQTTDKKVNQVSPILFKKY 57
Query: 176 GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGV 235
T + + N L ++I P+G+++ KAK IK + + + +N IP T+E L LPGV
Sbjct: 58 P-TPQALANADLKDLEEIIKPLGYYRRKAKLIKECAKAIVEKFNGQIPKTLEELISLPGV 116
Query: 236 GPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHV 295
G K A + +A+ KIP + VD HV
Sbjct: 117 GRKTASAFLVNAY------------------------------------KIPAIVVDTHV 140
Query: 296 HRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNK 355
R++ RL T PE K+L + + W+ +++ LV FG+ IC + +P C+ C
Sbjct: 141 KRVAKRLKITNQ-TNPEKVEKDLAKFFSKENWAYISNALVLFGRYICTANKPKCKECYVS 199
Query: 356 DLCPQGKKEL 365
D+CP KK L
Sbjct: 200 DICPYEKKNL 209
>gi|184200103|ref|YP_001854310.1| putative endonuclease III [Kocuria rhizophila DC2201]
gi|183580333|dbj|BAG28804.1| putative endonuclease III [Kocuria rhizophila DC2201]
Length = 278
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 39/213 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D VN G + E +EDV +++ +GF+++KA+
Sbjct: 55 WQLLVATVLSAQTTDIRVNAVTPGLFAAYPGPRELAEAPAEDVQ-EMVRSLGFYRSKARS 113
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + + Y+ +P T+ L LPGVG K A++ + +A+G+
Sbjct: 114 IQALAARVVDEYDGTVPGTLAQLVTLPGVGRKTANVVLGNAFGV---------------- 157
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD H R++ RLGWT V P ++ + P +L
Sbjct: 158 --------------------PGITVDTHFGRLARRLGWT-VQDDPVKVEADVAALFPPAL 196
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W+E++H L+ G++IC S+RP+C C DLCP
Sbjct: 197 WTELSHELIYHGRRICHSRRPACGVCPVADLCP 229
>gi|331268741|ref|YP_004395233.1| endonuclease III [Clostridium botulinum BKT015925]
gi|329125291|gb|AEB75236.1| endonuclease III [Clostridium botulinum BKT015925]
Length = 208
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ MLS+Q DE + G L + + E + +++ LG+ I G +K K+K+I
Sbjct: 30 YELLIATMLSAQCTDERVNIVTGELFKEYNSPEKMITLTQEELGQKIKSCGLYKNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS + YN +IP ++E L +LPG+G K A++ +++A+G
Sbjct: 90 LGASYEILNKYNGNIPGSMEQLIQLPGIGRKTANVVLSNAFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+S+R+G K K + KEL +PE W
Sbjct: 132 ------------------IPAIAVDTHVFRVSNRIGIAK-GKNVDVVEKELMKNIPEEKW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
S+ +H L+ G++ICK+++P CE C
Sbjct: 173 SDTHHYLIWHGRKICKARKPDCEIC 197
>gi|337283826|ref|YP_004623300.1| endonuclease III [Pyrococcus yayanosii CH1]
gi|334899760|gb|AEH24028.1| endonuclease III [Pyrococcus yayanosii CH1]
Length = 234
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV L TI +I N S + + + + + VG W++K +
Sbjct: 49 YRTLIKCIISQRNRDEVTDRVAEELFRKYPTINDIANASVEKMQEFLRSLKVGLWRSKGR 108
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S I+ + Y+ +P+T+E L KLPG+G K A++ + + G GK
Sbjct: 109 WIVEVSRIILERYDGRVPDTLEELMKLPGIGRKCANIVLAY------GFGK--------- 153
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + VD HV+R+S RLG + +PE + L+ +P+
Sbjct: 154 ---------------------PAIPVDTHVNRVSKRLGLAPLEASPEKVEEYLKVLIPKE 192
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VNH +V G+++C+ +P C C ++LCP+
Sbjct: 193 EWLYVNHAMVDHGKKVCRPIKPKCNECPVRNLCPK 227
>gi|333979099|ref|YP_004517044.1| endonuclease III [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822580|gb|AEG15243.1| endonuclease III [Desulfotomaculum kuznetsovii DSM 6115]
Length = 229
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ MLS+QT D + RL + ++ + + L + I G +K K+++I
Sbjct: 44 FQLLVAAMLSAQTTDRQVNKITERLFKRYREPQDFARLNPEELAREIKGCGLYKNKSRNI 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN+ +P T+ L LPGVG K A++ +N A+G
Sbjct: 104 IATSRILVEKYNSQVPRTLGELELLPGVGRKTANVVLNVAFGQ----------------- 146
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+SHRLG + KTPE T +EL + +PE
Sbjct: 147 -------------------PTLPVDTHVFRVSHRLGLAR-GKTPEKTEEELLAIIPEYAR 186
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+H L+ G+ IC ++RP C C LCP
Sbjct: 187 RAAHHQLIAHGRTICTARRPRCNICPVARLCP 218
>gi|188997398|ref|YP_001931649.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932465|gb|ACD67095.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
Length = 209
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 50/250 (20%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDE-VNHAAMGRLKEH 175
I ++KH P + +++ + +LI ++LS+QT D+ VN + K++
Sbjct: 9 IERLKKHFPDPKIELNYEN-----------EFQLLIVIILSAQTTDKKVNQVSPILFKKY 57
Query: 176 GLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGV 235
T + + N L ++I P+GF+K KAK IK + + + ++ IP T+E L LPGV
Sbjct: 58 P-TPQALANADLKDLEEIIKPLGFYKRKAKLIKECAKAILEKFSGQIPKTLEELTSLPGV 116
Query: 236 GPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHV 295
G K A + +A+ KIP + VD HV
Sbjct: 117 GRKTASALLVNAY------------------------------------KIPAIVVDTHV 140
Query: 296 HRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNK 355
R++ RL T +PE K+L + + W +++ LV FG+ IC + +P C+ C
Sbjct: 141 KRVAKRLKITNQ-TSPEKVEKDLTKFFSKENWVYISNALVLFGRYICTANKPKCKECYVS 199
Query: 356 DLCPQGKKEL 365
D+CP KK L
Sbjct: 200 DICPYEKKNL 209
>gi|292671021|ref|ZP_06604447.1| endonuclease III [Selenomonas noxia ATCC 43541]
gi|422343635|ref|ZP_16424562.1| endonuclease III [Selenomonas noxia F0398]
gi|292647338|gb|EFF65310.1| endonuclease III [Selenomonas noxia ATCC 43541]
gi|355378051|gb|EHG25242.1| endonuclease III [Selenomonas noxia F0398]
Length = 210
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + RL T E I + + L I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDVRVNIVTSRLFPRANTPEAIASLGQAELEAAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L KLPGVG K A++ M+ A+
Sbjct: 92 LETCDILLQEYGGEVPADFEALQKLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
++P + VD HV R+++RL V KTP + K L+ +P + W
Sbjct: 133 -----------------RVPAIAVDTHVFRVANRLHLA-VGKTPLEVEKGLQKAIPRADW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S+ +H L+ G+QICK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRQICKARKPLCGDCPLSFICP 206
>gi|78043065|ref|YP_359967.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
gi|77995180|gb|ABB14079.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
Length = 210
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q+ D + +L ++ + E+ L + I +G ++ KA+++
Sbjct: 30 FQLLVAVVLSAQSTDRQVNKVTEKLFLFVKEPRDLLDMGEEELSRQIRSLGLYRNKARNL 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++IL + Y+ +P++ L KLPGVGPK A ++ G+G ++
Sbjct: 90 IKIAEILDREYHGQVPDSFAELLKLPGVGPKTAE--------VIVGVGFNK--------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P VD HV R++ RLG +K +TPE +L+ P + W
Sbjct: 133 -------------------PSFPVDTHVFRVARRLGLSKA-RTPEGVSFDLKKIFPPNSW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+++H L+ FG++ICK+Q+PSC C + C
Sbjct: 173 IDLHHRLIFFGRRICKAQKPSCNICPFPEFC 203
>gi|88602341|ref|YP_502519.1| endonuclease III [Methanospirillum hungatei JF-1]
gi|88187803|gb|ABD40800.1| DNA-(apurinic or apyrimidinic site) lyase [Methanospirillum
hungatei JF-1]
Length = 215
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y LI+ +LS+QT D + L + + + KLI P GF++TKA++I
Sbjct: 33 YETLIATILSAQTTDRCVNMVTRELFMKYPDVAALSEAPVQDVEKLIHPTGFFRTKARNI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS ++ K ++ +P+ ++ L +LPGVG K A++ ++HA+ GI
Sbjct: 93 IAASQMVMKEFDGRVPDEMDDLVRLPGVGRKTANIVLDHAFSKTVGIA------------ 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T P+ +L P+ W
Sbjct: 141 -----------------------VDTHVRRVSMRLGLTDE-SDPDRIEMDLVRVFPKEFW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+E+N L + G+++C ++ P+C+ C DLC
Sbjct: 177 AEINGLFILHGRRVCTARHPACDNCNLADLC 207
>gi|397906310|ref|ZP_10507123.1| Endonuclease III [Caloramator australicus RC3]
gi|397160659|emb|CCJ34460.1| Endonuclease III [Caloramator australicus RC3]
Length = 208
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +LS+QT DE + A L + +I N + L I G +KTKAK+I
Sbjct: 28 YELLIATILSAQTTDETVNKATAELFKDYNKPHDIANLTPQELEGYIKICGLYKTKAKNI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS I+ + +N ++PN +E L KLPGVG K A++ +++A+ GKD
Sbjct: 88 IEASKIIVEQFNGNVPNKMEDLIKLPGVGRKTANVVLSNAF------GKD---------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HV R+++RLG K T K+L +P+S W
Sbjct: 132 --------------------AIAVDTHVFRVANRLGLANA-KDVLQTEKQLMENIPKSYW 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S +H L+ G++IC +++P C+ C +D C
Sbjct: 171 SRAHHWLIWHGRKICTARKPKCDLCKLRDFC 201
>gi|384190110|ref|YP_005575858.1| Endonuclease III [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192901|ref|YP_005578648.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177602|gb|ADC84848.1| Endonuclease III [Bifidobacterium animalis subsp. lactis BB-12]
gi|340365638|gb|AEK30929.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 288
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 47/242 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D+ ++ L T + + + + +I P+GF+ KA+HI
Sbjct: 78 FELLVATILSAQTTDKRVNSITPELFGTYPTAAALADARLEDVESIIRPLGFYHVKAEHI 137
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + + IP T+E L LPGVG K A++ + +A+
Sbjct: 138 IAVARQIVERFGGQIPQTMEELTSLPGVGRKTANVVLGNAF------------------- 178
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRL----GWTKVFKTPEDTRKELESWLP 323
++P VD HV R++ RL W K TPE +E+ P
Sbjct: 179 -----------------RVPGFPVDTHVIRVTGRLHWRDDWMKTSTTPERIEQEITGCFP 221
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL---AER----VKKSPKKR 376
ES W++++H L+ FG+ IC S+ P CE C CP + L AER +++P+K
Sbjct: 222 ESEWTDLSHRLIIFGRNICTSRSPECENCPLLPTCPSAGEFLEIAAERKARATRRAPRKP 281
Query: 377 KS 378
+S
Sbjct: 282 RS 283
>gi|289193061|ref|YP_003459002.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
gi|288939511|gb|ADC70266.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
Length = 344
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 42/227 (18%)
Query: 140 DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGF 199
+IA + + VL+S ++S++TKDEV RL + ++++ N E+ L LI P GF
Sbjct: 19 EIAKDRDPFKVLVSTIISARTKDEVTEEVSKRLFKEIKDVDDLLNIDEEKLSNLIYPAGF 78
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
+K KAK++K + ILK+NYN +P+++E L KLPGVG K A+L + A+ KD
Sbjct: 79 YKNKAKNLKKLAKILKENYNGRVPDSLEELLKLPGVGRKTANLVITLAF------NKD-- 130
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKEL 318
+CVD HVHRI +R W V +TPE+T EL
Sbjct: 131 ----------------------------GICVDTHVHRICNR--WEIVDTETPEETEFEL 160
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
LP+ W +N+LLV FG++IC S +P C+ C ++ CP +K
Sbjct: 161 RKKLPKKYWKVINNLLVVFGREIC-SPKPKCDKCFEEIREKCPYYEK 206
>gi|167044454|gb|ABZ09130.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_APKG6D9]
Length = 216
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 37/219 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++TKDE A+ L + + N + K+I +GF+ K+K I
Sbjct: 34 FSILIGTILSARTKDEATTKAVKALFSKYKNSKQLANAKVKDVEKIIKSIGFFHVKSKRI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I+ Y +P+ ++ L +LPGVG K A+ + +A+
Sbjct: 94 IEVAKIINTKYKGKVPDNLDTLVELPGVGRKTANCVLVYAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK P + VD+HVHRIS+RLG K PE+T +EL +P+ W
Sbjct: 135 ---------------EK--PAIPVDIHVHRISNRLGLVDT-KNPEETEQELMKKIPKKYW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
++N V +GQ ICK P C+ C K C K + A
Sbjct: 177 IDINDTFVMYGQNICKPISPMCDVCKIKKNCKYYKTKYA 215
>gi|448613307|ref|ZP_21663187.1| endonuclease III [Haloferax mucosum ATCC BAA-1512]
gi|445740204|gb|ELZ91710.1| endonuclease III [Haloferax mucosum ATCC BAA-1512]
Length = 227
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 38/217 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E E+ +D L + I + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKVTATLFEKYDDAEDYATADQDELAEDINSITYYNNKAKY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I+ A SDI++K + ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACSDIIEK-HGGEVPDTMSDLTDLAGVGRKTANVVLQHGHDIVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T PE ++L +PE
Sbjct: 143 ------------------------VVDTHVQRLSRRLGLTDE-SYPERIEEDLMPVVPER 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ +C ++ P C+ C+ +D+CP K
Sbjct: 178 DWQQFTHLFISHGRAVCDARNPDCDACVLEDICPSSK 214
>gi|17231462|ref|NP_488010.1| endonuclease III [Nostoc sp. PCC 7120]
gi|17133104|dbj|BAB75669.1| endonuclease III [Nostoc sp. PCC 7120]
Length = 223
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 44/221 (19%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V A R + ++ N L L+ GF++ KA
Sbjct: 40 QLLVATILSAQCTDERVNLVTPALFSRFPDA----PSLANADLTELENLVRSTGFYRNKA 95
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I+ A ++ +N+ +PNT+E L KLPGV K A++ + HA+GI G+
Sbjct: 96 KNIQAACRMIVSEFNSAVPNTMEQLLKLPGVARKTANVVLAHAYGINAGVT--------- 146
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R+S RLG TK + P ++L LP+
Sbjct: 147 --------------------------VDTHVKRLSQRLGLTK-YPDPVHIEQDLMKLLPQ 179
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
W + L+ G+ +CK++ P CE C DLCP K +
Sbjct: 180 PDWENWSIRLIYHGRAVCKARSPVCEACELADLCPSATKTI 220
>gi|333987518|ref|YP_004520125.1| HhH-GPD family protein [Methanobacterium sp. SWAN-1]
gi|333825662|gb|AEG18324.1| HhH-GPD family protein [Methanobacterium sp. SWAN-1]
Length = 212
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI +LS +T+DE AA L T I + + + LI GF+ KAK +
Sbjct: 30 FRVLIRTILSQRTRDENTDAASASLFARYPTARLIADAPIENIEILIKKSGFYHVKAKRV 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S I+ + Y++ +P+ ++ L LPGVG K A+ C+ +V G KD
Sbjct: 90 KEVSKIIHEEYDDVVPDDMKELLSLPGVGRKTAN-CV-----LVYGFHKD---------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VDVHVHRIS+R+G KTPE T EL +P W
Sbjct: 134 -----------------AIP---VDVHVHRISNRIGLVDT-KTPEQTEVELMKTVPRKYW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV FGQ IC+ P E C DLC
Sbjct: 173 LPLNDLLVQFGQTICRPIGPKHEICPIADLC 203
>gi|405363125|ref|ZP_11026123.1| Endonuclease III [Chondromyces apiculatus DSM 436]
gi|397090068|gb|EJJ20954.1| Endonuclease III [Myxococcus sp. (contaminant ex DSM 436)]
Length = 227
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 46/255 (18%)
Query: 107 PAHWKEVLNNIREMRKHG-DAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P EVL +RE +H DA + A+ ++ + L++ +LS +T+DEV+
Sbjct: 11 PFDIDEVLGRVREAVRHFPDAAMFALAARGHDSL--------FEQLVACILSIRTRDEVS 62
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
L + T + + + + + + LI PV F + KA + + + + +P
Sbjct: 63 LPVSLALLQRASTPQALASLTPEAIDALIQPVTFHEAKAWQLHAIAVRTRDAFGGTLPCD 122
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++L GVGPK AHL A GI G IS
Sbjct: 123 AQVLQSFKGVGPKCAHL----ALGIACG--------------HEAIS------------- 151
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD+HVHR+++R G+ + +TPE T + LE+ LP + W E+N LLV FG+ IC
Sbjct: 152 -----VDIHVHRVTNRWGYVQA-RTPEATMEALEAQLPRAWWVELNRLLVPFGKHICTGT 205
Query: 346 RPSCETCLNKDLCPQ 360
RP C TC D C Q
Sbjct: 206 RPKCSTCPVLDACRQ 220
>gi|409095774|ref|ZP_11215798.1| endonuclease III [Thermococcus zilligii AN1]
Length = 242
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y LI ++S + +DEV + L IE I T + + + + VG WKTK +
Sbjct: 41 YRTLIHCIISQRMRDEVTYKVWEELFRKYGDIETIAATPIEEMQEFLRKQGVGLWKTKGE 100
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS IL + YN +P I L KLPG+G K A++ + + +G
Sbjct: 101 WIVRASQILLEKYNGKVPEDINELMKLPGIGRKCANIVLAYGFG---------------- 144
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L +PE
Sbjct: 145 -----------------KQAIP---VDTHVNRISKRLGLAPPGVAPEKVEEYLAGLIPED 184
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ IC+ +P C+ C ++LCP K
Sbjct: 185 KWIYVNHAMVDHGRSICRPIKPKCDECPLRELCPYAK 221
>gi|397781493|ref|YP_006545966.1| endonuclease III [Methanoculleus bourgensis MS2]
gi|396939995|emb|CCJ37250.1| endonuclease III [Methanoculleus bourgensis MS2]
Length = 237
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LI +LS+QT D +A L T E + + + LI +GF +KA++I
Sbjct: 45 FESLILTILSAQTTDRAVNAIRDDLFSRYPTPEALARAEPEEVEPLIRSIGFHHSKARYI 104
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L ++ ++P TI L LPGVG K A++ ++HA+GI GI
Sbjct: 105 VGTARKLISDFGGEVPRTIAELQSLPGVGRKTANIVLSHAFGINVGIA------------ 152
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S R+G+T P+ ++L + PE W
Sbjct: 153 -----------------------VDTHVRRVSKRIGFTDS-TNPDIIERDLMALFPEEAW 188
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N+LL+ G+++C +Q P E C DLC
Sbjct: 189 QDINYLLIRLGREVCTAQNPKHEECFVADLC 219
>gi|448666799|ref|ZP_21685444.1| endonuclease III [Haloarcula amylolytica JCM 13557]
gi|445771930|gb|EMA22986.1| endonuclease III [Haloarcula amylolytica JCM 13557]
Length = 227
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 110/244 (45%), Gaps = 45/244 (18%)
Query: 121 RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIE 180
R H + P A+ ++S R +LI+++LS+Q DE + L E + E
Sbjct: 18 RLHEEYPDSAISLNYS---------NRLELLIAVVLSAQCTDERVNEVTADLFEKYQSAE 68
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
+ +E+ L + I + F K +++ +IL + ++ ++P+T+ L LPGVG K A
Sbjct: 69 DYAEATEEQLAEDIYGITFHNNKGGYLQGIGEILTEEHDGEVPDTMSALTDLPGVGRKTA 128
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
++ + H IV GI VD HV R+S
Sbjct: 129 NVVLQHGHDIVEGI-----------------------------------VVDTHVQRLSR 153
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
RLG T+ + PE ++L +P W + HLL+ G+ +C ++ CE C+ D+CP
Sbjct: 154 RLGLTEE-ERPEAIEQDLLDVVPSGEWQQFTHLLIDHGRAVCGARSADCEACVLADICPS 212
Query: 361 GKKE 364
K +
Sbjct: 213 AKGD 216
>gi|410668198|ref|YP_006920569.1| ultraviolet N-glycosylase/AP lyase Pdg [Thermacetogenium phaeum DSM
12270]
gi|409105945|gb|AFV12070.1| ultraviolet N-glycosylase/AP lyase Pdg [Thermacetogenium phaeum DSM
12270]
Length = 219
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y L++ +LS+QT DE VN K + + + S D + +I G +++KA H
Sbjct: 37 YQALVATILSAQTTDEQVNRVTPIFFKRYP-DVTALARASVDEVADVIKSTGLYRSKAAH 95
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ A+ + + ++P+ + L +LPGVG K A++ + +A+G
Sbjct: 96 LVAAAKKIAAEHGGEVPSDLHPLLELPGVGRKTANVVLANAFG----------------- 138
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P L VD HVHR+++R+G K PE T K L+ LPE
Sbjct: 139 -------------------KPGLGVDTHVHRVANRIGLCSE-KHPEGTEKRLKELLPERD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W +HLL+ G++ C++++P C +C+ +D+C
Sbjct: 179 WGRAHHLLIFHGRRFCRARKPECPSCVLRDIC 210
>gi|402573123|ref|YP_006622466.1| endonuclease III [Desulfosporosinus meridiei DSM 13257]
gi|402254320|gb|AFQ44595.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Desulfosporosinus meridiei DSM 13257]
Length = 225
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q DE + L T + + L I +G + KAK+I
Sbjct: 35 FELLIATILSAQCTDERVNLVTASLFAEANTPQAVLELGLAKLENKIRSLGLYHNKAKNI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A +L +N+ +P ++LL +LPGVG K A++ +++A+GI
Sbjct: 95 LAACQVLVENFQGQVPGDLDLLKRLPGVGRKTANVVVSNAFGI----------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++HRLG + KTPE EL P W
Sbjct: 138 -------------------PSIAVDTHVFRVAHRLGLS-TGKTPEKVEDELMELFPRDKW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
S ++HLL+ G++IC +++P CE C + C ++E
Sbjct: 178 SLLHHLLIFHGRRICNARKPGCEVCPVSEYCKMHREE 214
>gi|354611750|ref|ZP_09029706.1| endonuclease III [Halobacterium sp. DL1]
gi|353196570|gb|EHB62072.1| endonuclease III [Halobacterium sp. DL1]
Length = 227
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E ++E+ N ED L + + + + +KA +
Sbjct: 35 RLELLIAVMLSAQCTDERVNKETAHLFEKYQSVEDYANADEDELSEDLNSITYHNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK ++ L + ++ ++P+T+E L L GVG K A++ + HA I GI
Sbjct: 95 IKSSAQTLIEEHDGEVPDTMEALTDLKGVGRKTANVVLQHAHDITEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +P
Sbjct: 143 -----------------------VVDTHVQRLSRRLGITEAER-PEAIEQDLMPVVPREH 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W H L+ G+ C ++ P C C+ +D+CP K
Sbjct: 179 WKNYTHWLIAHGRNTCTARNPDCGDCIVEDICPSSK 214
>gi|325958693|ref|YP_004290159.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
gi|325330125|gb|ADZ09187.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
Length = 216
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI +LS +T+DE AA L T E I N + + KLI GF+ KA +
Sbjct: 31 FRVLIRTILSQRTRDENTDAASAMLFSKYSTPEEIANAPTEEVEKLIKKSGFYHVKASRV 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S I+ ++YN+ +P + L LPGVG K A+ C+ +V G KD
Sbjct: 91 REVSRIIHEDYNDTVPEDMAELLSLPGVGRKTAN-CV-----LVYGFHKD---------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VDVHVHRIS+R+G TP++T ++L +P+ W
Sbjct: 135 -----------------AIP---VDVHVHRISNRIGLVNT-GTPDETEEKLMKIVPKKFW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N L V FGQ ICK P E C + C
Sbjct: 174 LPLNDLFVQFGQTICKPIGPKHEICPIAEYC 204
>gi|15893977|ref|NP_347326.1| endonuclease, gene nth [Clostridium acetobutylicum ATCC 824]
gi|337735905|ref|YP_004635352.1| endonuclease, nth [Clostridium acetobutylicum DSM 1731]
gi|15023567|gb|AAK78666.1|AE007584_2 Predicted endonuclease, gene nth [Clostridium acetobutylicum ATCC
824]
gi|336292612|gb|AEI33746.1| endonuclease, nth [Clostridium acetobutylicum DSM 1731]
Length = 211
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y +LI+ +LS+Q D+ VN KE+ T +C +E+ L + I G +K K+K+
Sbjct: 30 YELLIATVLSAQCTDKRVNLVTQELFKEYN-TPYKMCELTEEELQEKIRTCGLYKNKSKN 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I AS L +N ++P+ +E L LPGVG K A++ M++A+GI
Sbjct: 89 ILEASRGLIDRFNGEVPSNMEELTSLPGVGRKTANVVMSNAFGI---------------- 132
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+R+G K K +T K+L + +
Sbjct: 133 --------------------PAIAVDTHVFRVSNRIGLAKS-KNVYETEKQLMENIDKKD 171
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
WS ++H L+ G+QICK++RP CE C K++C
Sbjct: 172 WSTMHHALIWHGRQICKARRPDCEKCGLKEVC 203
>gi|283781452|ref|YP_003372207.1| endonuclease III [Pirellula staleyi DSM 6068]
gi|283439905|gb|ADB18347.1| endonuclease III [Pirellula staleyi DSM 6068]
Length = 214
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +LS+Q DE + L +H T + + + KL+ GF++ KAK+I
Sbjct: 34 YQLLIATILSAQCTDERVNIVTRDLFKHYPTADAMAEAPLKSIEKLVQSTGFFRNKAKNI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S L + Y +P +ELL KLPGVG K A++ + +GI +G+
Sbjct: 94 KECSRQLVEQYAGAVPRELELLVKLPGVGRKTANVVLGTCFGIPSGV------------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG TK P ++L + LP+ W
Sbjct: 141 ----------------------VVDTHVGRLSQRLGLTKEVD-PVKIERDLMAQLPQEEW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+H ++ G+++CK+++P+C+ C + CP+
Sbjct: 178 IMFSHRMIHHGRRVCKARKPACDHCNFAEFCPR 210
>gi|75907952|ref|YP_322248.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Anabaena variabilis ATCC 29413]
gi|75701677|gb|ABA21353.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Anabaena variabilis ATCC 29413]
Length = 223
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 44/221 (19%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V A R + ++ N L L+ GF++ KA
Sbjct: 40 QLLVATILSAQCTDERVNLVTPALFSRFPDA----PSLANADLTELENLVRSTGFYRNKA 95
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I+ A ++ YN+ +PNT+E L KLPGV K A++ + HA+GI G+
Sbjct: 96 KNIQAACRMIVSEYNSVVPNTMEQLLKLPGVARKTANVVLAHAYGINAGVT--------- 146
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R+S RLG TK + P ++L LP+
Sbjct: 147 --------------------------VDTHVKRLSQRLGLTK-YPDPVHIEQDLMKLLPQ 179
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
W + L+ G+ +CK++ P CE C DLCP K +
Sbjct: 180 PDWENWSIRLIYHGRAVCKARSPVCEACELADLCPSVTKTI 220
>gi|303284701|ref|XP_003061641.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456971|gb|EEH54271.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 192
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+ L++ +LS Q +D V AM RL++ + + + + + + + +TKA
Sbjct: 9 FQALVATLLSVQCRDGVALRAMTRLRDALGGQCVVAAVTAATRETIEDAVSCCNYKRTKA 68
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
+++K + ++ + +P T+ L LPGVGPK+AHL + A+G +G+
Sbjct: 69 RYVKEVAAAIRAKHRGVVPRTVVELKTLPGVGPKIAHLVASVAFGEASGV---------- 118
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT--KVFKTPEDTRKELESWL 322
VD HV R++ RLGWT ++ E TR +E WL
Sbjct: 119 -------------------------VVDAHVRRVASRLGWTTDAESRSAEATRARMEEWL 153
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
P W L+ GQ+ C +++P C C + CP
Sbjct: 154 PREEWERATLALIAHGQETCDARKPRCGECAVANACPSA 192
>gi|357400465|ref|YP_004912390.1| Endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386356517|ref|YP_006054763.1| endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766874|emb|CCB75585.1| Endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807025|gb|AEW95241.1| endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 330
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + L T E + L +++ P GF++ KA+ +
Sbjct: 103 FQLLVATVLSAQTTDLRVNMTTPALFARYPTPEEMAAADPQELEEIVRPTGFFRAKARSL 162
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ + ++P +E L LPGVG K A++ + +A+G+
Sbjct: 163 LGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLGNAFGV----------------- 205
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H R++ R GWT + PE +E+ S P+S W
Sbjct: 206 -------------------PGITVDTHFGRLARRFGWTTS-EDPEKIEEEVGSLFPKSEW 245
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ ++H L+ G+++C S++P+C C LCP
Sbjct: 246 TMLSHRLIFHGRRVCHSRKPACGACPIAPLCP 277
>gi|443478726|ref|ZP_21068443.1| endonuclease III [Pseudanabaena biceps PCC 7429]
gi|443015946|gb|ELS30718.1| endonuclease III [Pseudanabaena biceps PCC 7429]
Length = 222
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 36/215 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++++LS+Q DE + +L + N D L +L+ GF++ KAK+I+
Sbjct: 39 QLLVAVILSAQCTDERVNMVTPKLFARFPDAIALANADLDELMELVHSTGFYRNKAKNIR 98
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A +++ ++++ +PNT++ L KL GV K A++ + HA+GI G+
Sbjct: 99 SACEMIVRDFDGKVPNTMDSLLKLAGVARKTANVVLAHAYGINAGVT------------- 145
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R++ RLG TK F+ P ++L + LP+ W
Sbjct: 146 ----------------------VDTHVKRLTKRLGLTK-FEEPLKVERDLMAMLPQRDWE 182
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+ ++ G+ IC +++P+C+ C DLCP K
Sbjct: 183 NWSIRIIYHGRAICNARKPACDRCELADLCPSAPK 217
>gi|444911067|ref|ZP_21231243.1| Endonuclease III [Cystobacter fuscus DSM 2262]
gi|444718405|gb|ELW59218.1| Endonuclease III [Cystobacter fuscus DSM 2262]
Length = 232
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 117/267 (43%), Gaps = 46/267 (17%)
Query: 95 PDENDTKKTKWEPAHWKEVLNNIRE-MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLIS 153
P + T +P + VL +RE ++ H A + + ++ + L++
Sbjct: 4 PSPGSSPGTHKQPFDLESVLERVREAIQGHAAAAMFELAERGHTSL--------FEQLVA 55
Query: 154 LMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDI 213
+LS +T+DEV+ RL T E + + L LI PV F + KA+ I +
Sbjct: 56 CILSIRTRDEVSLPVALRLLSTARTPEAMRRLGTERLQALIRPVTFPEPKARTIHDIAVR 115
Query: 214 LKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISR 273
+ + +P +E+L GVGPK AHL + A G Q +S
Sbjct: 116 AVEEFVGALPADVEVLQSFKGVGPKCAHLALGIAGG-----------QTYIS-------- 156
Query: 274 SELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHL 333
VDVHVHR+++R G+ +TPE T LE+ LP + W E+N L
Sbjct: 157 -----------------VDVHVHRVTNRWGYVHT-RTPEQTLAALEAKLPRAHWVELNRL 198
Query: 334 LVGFGQQICKSQRPSCETCLNKDLCPQ 360
LV FG+ +C RP C TC +C Q
Sbjct: 199 LVPFGKHVCTGVRPRCSTCPVLSMCQQ 225
>gi|257389142|ref|YP_003178915.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
gi|257171449|gb|ACV49208.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
Length = 228
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L++++LS+Q DE + L E + + E+ L + I + F KA +
Sbjct: 35 RLELLVAVVLSAQCTDERVNEVTADLFEKYQSARDYAEADEEQLAEDIYGITFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ A I+ + Y+ +P+T+ L LPGVG K A++ + H +V GI
Sbjct: 95 LTAAGQIMVEEYDGAVPDTMSGLTDLPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RLG T + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRITRRLGLTDE-ERPEAIEEDLMPIVPESE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HLL+ G+ +C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLLIDHGRAVCDARNPDCGDCVLADICPSQKGD 216
>gi|355574942|ref|ZP_09044578.1| endonuclease III [Olsenella sp. oral taxon 809 str. F0356]
gi|354818418|gb|EHF02910.1| endonuclease III [Olsenella sp. oral taxon 809 str. F0356]
Length = 230
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 36/216 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I ++LS+QT D + L T + + + +I +GF+ TKA+H
Sbjct: 37 FTLVICVLLSAQTTDVAVNKVTPELFRRWPTPQAMAAAEVLEVEDVIHSLGFYHTKARHC 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + ++ ++P T+E L LPGVG K A++ +N A+G+V GI
Sbjct: 97 VECAQAIIASFGGEVPGTMEELVTLPGVGRKTANIVLNKAFGVVDGIA------------ 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV+RI+ RL TP +L LP LW
Sbjct: 145 -----------------------VDTHVYRIASRLRLVDA-PTPAQAEPQLLDVLPRELW 180
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
VN + FG++ C SQRP C+ C DLCP K
Sbjct: 181 GPVNEQWIHFGRETCTSQRPKCDACALVDLCPSAFK 216
>gi|312143859|ref|YP_003995305.1| endonuclease III [Halanaerobium hydrogeniformans]
gi|311904510|gb|ADQ14951.1| endonuclease III [Halanaerobium hydrogeniformans]
Length = 216
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 39/216 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+QT D +VN KE+ T E+ S+ L K I +G ++ KAK+
Sbjct: 34 FELLIATILSAQTTDVQVNKVTAELFKEYN-TPEDFAALSKKELEKKINSIGLYRNKAKY 92
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I S IL + Y+ ++P+ + L KL GVG K A++ + +A+ D++ P
Sbjct: 93 IIKTSQILLEEYDGEVPHKRKELLKLAGVGRKTANVVLANAF--------DKAAFP---- 140
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RL + K PE T KEL +P+
Sbjct: 141 ------------------------VDTHVFRVSSRLALSSA-KNPEVTEKELTELIPKKY 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W +++H L+ G+ ICK+Q P C+ C LCP K
Sbjct: 176 WIDLHHWLIDHGRAICKAQNPDCDNCFCSHLCPYYK 211
>gi|253681997|ref|ZP_04862794.1| endonuclease III [Clostridium botulinum D str. 1873]
gi|253561709|gb|EES91161.1| endonuclease III [Clostridium botulinum D str. 1873]
Length = 208
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ MLS+Q DE + G L + + E + +++ LG+ I G +K K+K+I
Sbjct: 30 YELLIATMLSAQCTDERVNIVTGELFKEYNSPEKMITLTQEELGEKIKSCGLYKNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS + YN +IP+ +E L +LPG+G K A++ +++A+GI
Sbjct: 90 LAASYEILNKYNGNIPDNMEQLIQLPGIGRKTANVVLSNAFGI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+R+G K K E EL +P+ W
Sbjct: 133 -------------------PAIAVDTHVFRVSNRIGIAK-GKNVEVVENELMKNIPKEKW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
S+ +H L+ G++ICK+++P CE C
Sbjct: 173 SDTHHYLIWHGRKICKARKPQCEIC 197
>gi|357058022|ref|ZP_09118879.1| endonuclease III [Selenomonas infelix ATCC 43532]
gi|355374599|gb|EHG21893.1| endonuclease III [Selenomonas infelix ATCC 43532]
Length = 210
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + GRL ++ T E I + L I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDVRVNVVTGRLFQYANTPETIAALGQVKLETAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL + Y ++P E L KLPGVG K A++ M+ A+
Sbjct: 92 LETCHILLQEYGGEVPADFEALQKLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+++RL V KTP + K L+ +P W
Sbjct: 133 -----------------HVPAIAVDTHVFRVANRLRLA-VGKTPLEVEKGLQKAIPREDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S+ +H L+ G+Q+CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRQLCKARKPLCGECPLAQVCP 206
>gi|293376428|ref|ZP_06622660.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325845046|ref|ZP_08168362.1| endonuclease III [Turicibacter sp. HGF1]
gi|292644937|gb|EFF63015.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325488922|gb|EGC91315.1| endonuclease III [Turicibacter sp. HGF1]
Length = 214
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 36/216 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++++LS+QT D+ + L E E+ L + + +G ++ KAK+I
Sbjct: 31 FELVLAVLLSAQTTDKSVNKLTQTLFEKYKCPEDYIKVPLSELEQDVKTIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S IL Y+ +P+T E L KLPGVG K A++ ++ +G+
Sbjct: 91 QALSQILLDKYDGVVPSTFEELVKLPGVGRKTANVVLSVGFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P++ VD HV RIS RL + K T + L +PE+ W
Sbjct: 134 -------------------PRIAVDTHVERISKRLDFAKKDDTVLEVENRLMKLIPENRW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
S+ +HL++ FG+ C ++ P CETC D C +GKK
Sbjct: 175 SKAHHLMIFFGRYHCTAKNPKCETCPLFDACKEGKK 210
>gi|384457414|ref|YP_005669834.1| endonuclease, gene nth [Clostridium acetobutylicum EA 2018]
gi|325508103|gb|ADZ19739.1| endonuclease, gene nth [Clostridium acetobutylicum EA 2018]
Length = 196
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y +LI+ +LS+Q D+ VN KE+ T +C +E+ L + I G +K K+K+
Sbjct: 15 YELLIATVLSAQCTDKRVNLVTQELFKEYN-TPYKMCELTEEELQEKIRTCGLYKNKSKN 73
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I AS L +N ++P+ +E L LPGVG K A++ M++A+GI
Sbjct: 74 ILEASRGLIDRFNGEVPSNMEELTSLPGVGRKTANVVMSNAFGI---------------- 117
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+R+G K K +T K+L + +
Sbjct: 118 --------------------PAIAVDTHVFRVSNRIGLAKS-KNVYETEKQLMENIDKKD 156
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
WS ++H L+ G+QICK++RP CE C K++C
Sbjct: 157 WSTMHHALIWHGRQICKARRPDCEKCGLKEVC 188
>gi|345006727|ref|YP_004809580.1| endonuclease III [halophilic archaeon DL31]
gi|344322353|gb|AEN07207.1| endonuclease III [halophilic archaeon DL31]
Length = 227
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LIS++LS+Q DE + L T E+ N E+ L + I + F +KA ++K
Sbjct: 37 QLLISVVLSAQCTDERVNKVTEELYRTYETAEDFANADEEQLAEEIYGITFHNSKAGYLK 96
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ + + +N ++P+T+E L +L GVG K A++ + HA +V GI
Sbjct: 97 SIGEDIVEKHNGEVPDTMEELTELSGVGRKTANVVLQHAHDVVEGI-------------- 142
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV RIS RLG T+ + PE ++L ++P W
Sbjct: 143 ---------------------VVDTHVQRISRRLGLTEE-ERPEAIEQDLLEFVPRRNWQ 180
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ HL + G+ +C ++ P C C D+CP K
Sbjct: 181 QFTHLFIDHGRAVCTARNPDCGDCELADICPSEK 214
>gi|428171428|gb|EKX40345.1| hypothetical protein GUITHDRAFT_43372, partial [Guillardia theta
CCMP2712]
Length = 205
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 40/219 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEH---GLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+ L++ +LS Q D V A L+E LT++ + + + L I ++KTKA
Sbjct: 20 FLCLVAALLSVQCLDSVALKAFESLREGLGGQLTVDRVSSMTAAELEPYIKSCNYYKTKA 79
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K I + LKK + +P + L +L GVGPK+A+L ++ G+G DES
Sbjct: 80 KSIHACAVSLKKRHGGRVPASFSSLVQLEGVGPKIANLVLS------VGLG-DES----- 127
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW---TKVFKTPEDTRKELESW 321
L VD HVHR++ RLGW + ED+R+ LE W
Sbjct: 128 ----------------------AGLVVDTHVHRVAGRLGWAVKSADGGKAEDSRRMLEEW 165
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+PES + +L+ FGQ +C RPSC+ C + CP
Sbjct: 166 VPESERVDFTLVLISFGQTVCTPLRPSCDVCPVRACCPS 204
>gi|206602825|gb|EDZ39306.1| Putative endonuclease III [Leptospirillum sp. Group II '5-way CG']
Length = 210
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y+VLI +LS +TKD V A RL E + ++ + LI PVGF++TKAK I
Sbjct: 28 YNVLIMTILSLRTKDSVTMPASQRLFEKAPDLPSLSQMEISDIESLIFPVGFYRTKAKTI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++ + + IP T+E L LPGVG K A+L + G K+
Sbjct: 88 KTIAERVLTEFEGKIPETLEGLLSLPGVGLKTANLVLT------VGFEKE---------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
CVD+HVHRI +R G + +P++T + +E LP
Sbjct: 132 --------------------GFCVDIHVHRILNRWGVIQT-HSPDETYRIVEPVLPRKWK 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
N LLV FGQ C+ P C C
Sbjct: 171 RRANALLVSFGQHFCRPVSPFCSVC 195
>gi|448321572|ref|ZP_21511048.1| endonuclease III [Natronococcus amylolyticus DSM 10524]
gi|445603124|gb|ELY57092.1| endonuclease III [Natronococcus amylolyticus DSM 10524]
Length = 227
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E E+ SE+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFEKYDGAEDYVAVSEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL + +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEEER-PEAIEQELMALVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ C ++ P C+ C+ D+CP K
Sbjct: 179 WQQFTHLCIDHGRATCTARSPDCDDCVLADVCPSEK 214
>gi|255528039|ref|ZP_05394875.1| endonuclease III [Clostridium carboxidivorans P7]
gi|296185709|ref|ZP_06854118.1| endonuclease III [Clostridium carboxidivorans P7]
gi|255508278|gb|EET84682.1| endonuclease III [Clostridium carboxidivorans P7]
gi|296049837|gb|EFG89262.1| endonuclease III [Clostridium carboxidivorans P7]
Length = 212
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 38/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LIS +LS+Q D + +L E T E + +E+ L + I GF+K K+K+I
Sbjct: 30 YELLISTILSAQCTDVRVNMVTEKLYEKYNTPETMITLTEEELSEKIRSCGFYKNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ + +N +P+T+E L KLPGVG K A++ +++A+G+
Sbjct: 90 LGATKAILEN-GGKVPDTMEELLKLPGVGRKTANVVLSNAFGV----------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+RLG K TPE K L +P +W
Sbjct: 132 -------------------PAIAVDTHVFRVSNRLGIAK-GDTPEQVEKGLMKNVPRDMW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
S+ +H L+ G+ ICKS++P CE C
Sbjct: 172 SDTHHYLIWHGRLICKSRKPDCEKC 196
>gi|374635339|ref|ZP_09706940.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris formicicus
Mc-S-70]
gi|373562615|gb|EHP88824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris formicicus
Mc-S-70]
Length = 344
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 121/232 (52%), Gaps = 42/232 (18%)
Query: 135 HSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI 194
++ +IA E + VLIS +LS++TKDEV RL ++++ + L KLI
Sbjct: 14 NAVVTEIAKEKSPFKVLISTILSARTKDEVTEEISKRLFGKVRDVDDLLKIDLEKLEKLI 73
Query: 195 IPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGI 254
PVGF+KTKAK++K + +LK+NYN ++PN ++ + KLPGVG K A+L + A+
Sbjct: 74 YPVGFYKTKAKNLKKLAKVLKENYNGEVPNELDEILKLPGVGRKTANLVITLAF------ 127
Query: 255 GKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPED 313
D+ +CVD HVHRI +R W +TPE+
Sbjct: 128 --DDY----------------------------GICVDTHVHRICNR--WEYVETETPEE 155
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
T EL LP+ W +N+LLV FG+++C S P C C ++ CP KK
Sbjct: 156 TEMELRKKLPKKYWKIINNLLVVFGREVC-SPTPKCRKCFEEIRERCPYYKK 206
>gi|400756511|ref|NP_952501.2| endonuclease III-like DNA glycosidase [Geobacter sulfurreducens
PCA]
gi|409911973|ref|YP_006890438.1| endonuclease III-like DNA glycosidase [Geobacter sulfurreducens
KN400]
gi|298505566|gb|ADI84289.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter sulfurreducens KN400]
gi|399107822|gb|AAR34824.2| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter sulfurreducens PCA]
Length = 218
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S +LS +T+D A RL T + S+D + K I PVGF+ TKA+ I
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFALADTPAAMVRLSKDDIEKAIYPVGFYHTKAEQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L + Y+ +P+ ++ L GVG K A+L I G GK
Sbjct: 96 LEICRVLLERYDGGVPDELDELLAFKGVGRKTANLV------ITLGFGK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD HVHRI +R G+ + KTPE T L LP W
Sbjct: 139 -------------------PGICVDTHVHRICNRWGYIRT-KTPEQTEFSLRRILPHRYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LV FGQ C P C TC+ C
Sbjct: 179 LVINDYLVTFGQNHCTPVSPRCSTCVLAQWC 209
>gi|15668794|ref|NP_247597.1| endonuclease III [Methanocaldococcus jannaschii DSM 2661]
gi|3915935|sp|Q58030.2|Y613_METJA RecName: Full=Putative endonuclease MJ0613
gi|2826298|gb|AAB98606.1| endonuclease III (nth1) [Methanocaldococcus jannaschii DSM 2661]
Length = 344
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 42/227 (18%)
Query: 140 DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGF 199
+IA + + VLIS ++S++TKDEV +L + ++++ N E+ L LI P GF
Sbjct: 19 EIAKDKDPFKVLISTIISARTKDEVTEEVSKKLFKEIKDVDDLLNIDEEKLADLIYPAGF 78
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
+K KAK++K + ILK+NYN +P+++E L KLPGVG K A+L + A+ KD
Sbjct: 79 YKNKAKNLKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLAF------NKD-- 130
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKEL 318
+CVD HVHRI +R W V +TPE+T EL
Sbjct: 131 ----------------------------GICVDTHVHRICNR--WEIVDTETPEETEFEL 160
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
LP+ W +N+LLV FG++IC S + C+ C K+ CP +K
Sbjct: 161 RKKLPKKYWKVINNLLVVFGREIC-SSKSKCDKCFKEIKEKCPYYEK 206
>gi|2127882|pir||E64376 endonuclease III - Methanococcus jannaschii
Length = 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 42/227 (18%)
Query: 140 DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGF 199
+IA + + VLIS ++S++TKDEV +L + ++++ N E+ L LI P GF
Sbjct: 28 EIAKDKDPFKVLISTIISARTKDEVTEEVSKKLFKEIKDVDDLLNIDEEKLADLIYPAGF 87
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
+K KAK++K + ILK+NYN +P+++E L KLPGVG K A+L + A+ KD
Sbjct: 88 YKNKAKNLKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLAF------NKD-- 139
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKEL 318
+CVD HVHRI +R W V +TPE+T EL
Sbjct: 140 ----------------------------GICVDTHVHRICNR--WEIVDTETPEETEFEL 169
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
LP+ W +N+LLV FG++IC S + C+ C K+ CP +K
Sbjct: 170 RKKLPKKYWKVINNLLVVFGREIC-SSKSKCDKCFKEIKEKCPYYEK 215
>gi|410657012|ref|YP_006909383.1| Endonuclease III [Dehalobacter sp. DCA]
gi|410660050|ref|YP_006912421.1| Endonuclease III [Dehalobacter sp. CF]
gi|409019367|gb|AFV01398.1| Endonuclease III [Dehalobacter sp. DCA]
gi|409022406|gb|AFV04436.1| Endonuclease III [Dehalobacter sp. CF]
Length = 217
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D+ + L E T + + + ++I P+G ++TKAK+I
Sbjct: 37 FELLVATILSAQTTDQKVNKVTAVLFERCPTPKKMLEITPREFEEIIHPIGLFRTKAKNI 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++L + ++ D+P+ ++ L K+PGVG K A + + +A+GI
Sbjct: 97 LQTCELLIEEHHGDVPSNLDDLVKMPGVGRKTAGVVLANAYGI----------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+++RLG ++ K P KEL + +P LW
Sbjct: 140 -------------------PALPVDTHVLRVANRLGLSRE-KDPSKVEKELTALIPMELW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ +H L+ G+++C +++P C C KD CP
Sbjct: 180 IDTHHRLIFHGRKLCHARKPECPVCPLKDCCP 211
>gi|448337892|ref|ZP_21526965.1| endonuclease III [Natrinema pallidum DSM 3751]
gi|445624852|gb|ELY78225.1| endonuclease III [Natrinema pallidum DSM 3751]
Length = 227
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N +D L + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNQETEHLFEKYDGAEDYANAEQDELAADLDSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + + ++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACESILEEHDGEVPDTMAELTDLSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + P+ +L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPDRIEADLMEIVPEDS 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W E HL + G+ C +Q P C C+ DLCP K +
Sbjct: 179 WQEFTHLCIDHGRATCTAQNPDCRDCVLADLCPSAKGD 216
>gi|320529090|ref|ZP_08030182.1| endonuclease III [Selenomonas artemidis F0399]
gi|402303546|ref|ZP_10822639.1| endonuclease III [Selenomonas sp. FOBRC9]
gi|320138720|gb|EFW30610.1| endonuclease III [Selenomonas artemidis F0399]
gi|400378384|gb|EJP31241.1| endonuclease III [Selenomonas sp. FOBRC9]
Length = 209
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + RL T E I + L + I GF++ KAKHI
Sbjct: 32 FELLVAVILSAQCTDARVNIVTSRLFPRANTPEAIAGLGQSQLEEAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L +LPGVG K A++ M+ A+
Sbjct: 92 IETCDILLREYGGEVPADFEALQRLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+S+RL V KTP + K L+ +P + W
Sbjct: 133 -----------------HIPAIAVDTHVFRVSNRLHLA-VGKTPLEVEKGLQKVIPRADW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
S+ +H L+ G+++CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRRLCKARKPLCGQCPIAPVCPSA 208
>gi|312793645|ref|YP_004026568.1| endonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180785|gb|ADQ40955.1| endonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 211
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +L++Q+ DE + L + T+E+ + L I PVGF+K KAK I
Sbjct: 31 YELLIATILAAQSTDERVNKITAELFKKYPTLESFAEANISELENDIKPVGFYKNKAKSI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL + YN +P TIE L KL GVG K A++ M + +G
Sbjct: 91 KETARILVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD H R+S+RLG K EL+ + L+
Sbjct: 133 ------------------IPSIIVDTHCKRLSNRLGLVNS-KDATKIEFELKKIVEPQLY 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ ++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 174 TIFSNLMVYHGRAVCKAIKPKCEVCTIKDVCEYFK 208
>gi|312135267|ref|YP_004002605.1| endonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775318|gb|ADQ04805.1| endonuclease III [Caldicellulosiruptor owensensis OL]
Length = 211
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +L++Q+ DE + L + T+E+ L I PVGF+K KAK I
Sbjct: 31 YELLIATILAAQSTDECVNKITAELFKKYPTLESFAEADLSELENDIKPVGFYKNKAKSI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL + YN +P TIE L KL GVG K A++ M + +G
Sbjct: 91 KETAKILVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD H R+S+RLG K EL + L+
Sbjct: 133 ------------------IPSIIVDTHCMRLSNRLGLVNS-KDATKIEFELRDIVEPQLY 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ ++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 174 TIFSNLMVYHGRAVCKAIKPKCEVCTIKDVCKYFK 208
>gi|448538341|ref|ZP_21622847.1| endonuclease III [Halorubrum hochstenium ATCC 700873]
gi|445701423|gb|ELZ53405.1| endonuclease III [Halorubrum hochstenium ATCC 700873]
Length = 227
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E T E N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNAVCADLFETYETPEEYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEEHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIERDLLDIVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ DLCP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCVLADLCPSEKGD 216
>gi|251771121|gb|EES51705.1| putative endonuclease III [Leptospirillum ferrodiazotrophum]
Length = 213
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 100/212 (47%), Gaps = 38/212 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
VL+S +LS +T+D V AA RL +E+I E+ L ++I PVGF++TKAK IK
Sbjct: 33 RVLLSTILSLRTRDPVMEAASLRLFSRAPDLESIALMEEEELERIIYPVGFYRTKAKTIK 92
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ I+ + + +P+ I L LPGVG K A L + G GK
Sbjct: 93 QIAKIVLEKWKGSLPSEISPLLSLPGVGLKTATLVLG------AGFGKS----------- 135
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
L VD HVHRI++R G K K + T EL+ +P +L
Sbjct: 136 -------------------VLTVDTHVHRIANRWGAVKT-KDADATYWELDKIVPNTLKL 175
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+VN +LV FGQ IC P C C CP+
Sbjct: 176 KVNPVLVSFGQTICLPLSPRCSEC-TLSQCPK 206
>gi|108805468|ref|YP_645405.1| DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
[Rubrobacter xylanophilus DSM 9941]
gi|108766711|gb|ABG05593.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rubrobacter xylanophilus DSM 9941]
Length = 214
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++++LS+Q DE + RL T E+ + + L + I P GF++ KA+ I+
Sbjct: 31 ELLVAVILSAQCTDERVNRVTERLFRKYRTAEDYASAPLEELEQDIRPTGFYRNKARAIQ 90
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ L + + ++P T+E L LPGVG K A++ + +A+G+ G+
Sbjct: 91 GMARALLERHGGEVPKTMEELVALPGVGRKTANVVLGNAFGVNEGV-------------- 136
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG T PE ++L +PE +
Sbjct: 137 ---------------------VVDTHVRRVSRRLGLTSS-DDPEKIERDLLPQVPEEERT 174
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
HLL+ G+++CK++RP C C+ D+CP
Sbjct: 175 LFAHLLIFHGRRVCKARRPDCPGCVLNDICPS 206
>gi|167391460|ref|XP_001739785.1| endonuclease III [Entamoeba dispar SAW760]
gi|165896410|gb|EDR23825.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 147
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 83/172 (48%), Gaps = 36/172 (20%)
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
E VL I VGF+ TKAK +K I+K+ +NN +P T + L LPGVGPK+A L
Sbjct: 5 EKVLINCIKGVGFYTTKAKRLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASL---- 60
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
+ IG D ++ L +D H+ ISHRLGW
Sbjct: 61 ----ILSIGFD---------------------------RLESLAIDTHIFVISHRLGWAD 89
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+PE R +LESWLP+ WS N +V FGQ C+ P C+ C +D C
Sbjct: 90 G-SSPEKVRLQLESWLPKEEWSLFNKSIVAFGQCCCRKIHPKCKQCPIQDKC 140
>gi|313896540|ref|ZP_07830089.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974725|gb|EFR40191.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
Length = 209
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + RL T E I + L + I GF++ KAKHI
Sbjct: 32 FELLVAVILSAQCTDARVNIVTSRLFPRANTPEAIAGLGQSQLEEAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L +LPGVG K A++ M+ A+
Sbjct: 92 IETCDILLREYGGEVPADFEALQRLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+S+RL V KTP + K L+ +P + W
Sbjct: 133 -----------------HIPAIAVDTHVFRVSNRLHLA-VGKTPLEVEKGLQKVIPRADW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
S+ +H L+ G+++CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRRLCKARKPLCGQCPIAPVCPSA 208
>gi|312127482|ref|YP_003992356.1| endonuclease iii [Caldicellulosiruptor hydrothermalis 108]
gi|311777501|gb|ADQ06987.1| endonuclease III [Caldicellulosiruptor hydrothermalis 108]
Length = 202
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +L++Q+ DE + L + T+++ + L K I PVGF+K KAK I
Sbjct: 22 YELLIATILAAQSTDERVNKITAELFKKYPTLKSFAEADLEELEKDIKPVGFYKNKAKSI 81
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S IL YN +P TIE L KL GVG K A++ M + +G
Sbjct: 82 KETSRILIDKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG------------------ 123
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD H R+S+RLG K EL++ + ++
Sbjct: 124 ------------------IPSIIVDTHCKRLSNRLGLVNS-KDATKIEFELKNIVEPQMY 164
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ ++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 165 TIFSNLMVYHGRAVCKAIKPKCEVCTIKDVCEYFK 199
>gi|347753384|ref|YP_004860949.1| endonuclease III [Bacillus coagulans 36D1]
gi|347585902|gb|AEP02169.1| endonuclease III [Bacillus coagulans 36D1]
Length = 219
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI++ LS+Q D + + L + T ++ + L + I +G ++ KAK+I
Sbjct: 31 FELLIAVTLSAQCTDALVNKVTKNLFQKYKTPDDYIAVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + Y ++P T E L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLIEEYGREVPQTREELMKLPGVGRKTANVVLSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRYKDSVLEVEQTLMKKVPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
S +H ++ FG+ CK+QRP CE C DLC +GKK + ++
Sbjct: 175 SITHHRMIFFGRYHCKAQRPQCEICPLLDLCREGKKRMKQK 215
>gi|448633657|ref|ZP_21674156.1| endonuclease III [Haloarcula vallismortis ATCC 29715]
gi|445750348|gb|EMA01786.1| endonuclease III [Haloarcula vallismortis ATCC 29715]
Length = 227
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E + E+ SE+ L + I + F K +
Sbjct: 35 RLELLIAVVLSAQCTDERVNEVTADLFEKYQSAEDYAAASEEQLAEDIYGITFHNNKGGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
++ +IL + ++ ++P+T+ L LPGVG K A++ + H IV GI
Sbjct: 95 LQGIGEILTEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +P+S
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEKDR-PEAIEQDLLDVVPDSE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HLL+ G+ +C ++ C+ C D+CP K +
Sbjct: 179 WQQFTHLLIDHGRAVCGARSADCDACGLADICPSEKGD 216
>gi|225174628|ref|ZP_03728626.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
gi|225169755|gb|EEG78551.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
Length = 222
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 41/228 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q+ D+ + L + +++ + + L + I +G ++ KAKH+
Sbjct: 32 WQLLVAVILSAQSTDKQVNKVTANLFAKYASPQDMAELTPEELAEDIKSLGLFRNKAKHL 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ + + ++P T+ L LPGVG K A++ + +A+G+
Sbjct: 92 VGAARAILDQHGGEVPRTLAKLQSLPGVGRKTANVVLANAFGV----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+++RLG K KTPE+T K+L +P SLW
Sbjct: 135 -------------------PALAVDTHVFRVANRLGLAKA-KTPEETEKQLSRAIPRSLW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
++ +H L+ G+ IC +++P C C + C +KE K SPK+
Sbjct: 175 ADAHHWLILHGRYICVARKPRCPQCPVTEWCSWYQKE----QKTSPKR 218
>gi|55377588|ref|YP_135438.1| endonuclease III [Haloarcula marismortui ATCC 43049]
gi|448639924|ref|ZP_21677072.1| endonuclease III [Haloarcula sinaiiensis ATCC 33800]
gi|448659418|ref|ZP_21683273.1| endonuclease III [Haloarcula californiae ATCC 33799]
gi|55230313|gb|AAV45732.1| endonuclease III [Haloarcula marismortui ATCC 43049]
gi|445760359|gb|EMA11622.1| endonuclease III [Haloarcula californiae ATCC 33799]
gi|445762451|gb|EMA13672.1| endonuclease III [Haloarcula sinaiiensis ATCC 33800]
Length = 227
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ SE+ L + I + F K +
Sbjct: 35 RLELLIAVVLSAQCTDERVNEVTADLFEKYQGAEDYAAASEEQLAEDIYGITFHNNKGGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
++ +IL + ++ ++P+T+ L LPGVG K A++ + H IV GI
Sbjct: 95 LQGIGEILTEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RL T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLSRRLELTEEER-PEAIEQDLLDVVPESE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HLL+ G+ +C ++ CE C+ D+CP K +
Sbjct: 179 WQQFTHLLIDHGRAVCGARSADCEACVLADICPSEKGD 216
>gi|336114200|ref|YP_004568967.1| endonuclease III [Bacillus coagulans 2-6]
gi|335367630|gb|AEH53581.1| endonuclease III [Bacillus coagulans 2-6]
Length = 219
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI++ LS+Q D + + L + T ++ + L + I +G ++ KAK+I
Sbjct: 31 FELLIAVTLSAQCTDALVNKVTKNLFQKYKTPDDYIAVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL Y ++P T E L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRILIGEYGREVPQTREELMKLPGVGRKTANVVLSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRYKDSVLEVEQTLMKKVPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+QRP CE C DLC +GKK +
Sbjct: 175 SITHHRMIFFGRYHCKAQRPQCEICPLLDLCREGKKRM 212
>gi|322419437|ref|YP_004198660.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
gi|320125824|gb|ADW13384.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
Length = 218
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S +LS +T+D+ A RL + + + S + + I PVGF++ KA+ I
Sbjct: 36 FKVLVSCILSLRTRDQTTAEASARLFALAGSPQKMVRLSVPQIEEAIYPVGFYRVKAEQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L + Y ++P+ +E L K GVG K A+L + G K
Sbjct: 96 FEISRQLCELYQGEVPDDLETLLKFKGVGRKTANLVLT------LGFSK----------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P +CVD+HVHRI +R G+ K TPE T L LP W
Sbjct: 139 -------------------PGICVDIHVHRICNRWGYVKT-ATPEQTEFALRKKLPVEYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LLV FGQ C P C TC C
Sbjct: 179 IIINDLLVTFGQNQCTPVSPRCSTCPLYQFC 209
>gi|359787738|ref|ZP_09290737.1| endonuclease III [Mesorhizobium alhagi CCNWXJ12-2]
gi|359256481|gb|EHK59320.1| endonuclease III [Mesorhizobium alhagi CCNWXJ12-2]
Length = 258
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L T + + E+ +G I +G W+ KAK++
Sbjct: 58 FTLLVAVVLSAQATDVGVNKATRALFAVADTPQRMLELGEERVGDYIRTIGLWRNKAKNV 117
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S+ L +++ ++P +LL KLPGVG K A++ +N A+G
Sbjct: 118 IALSEALIRDFGGEVPGERDLLVKLPGVGRKTANVVLNMAFG------------------ 159
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H+ RI +RLG KTPE L +P+
Sbjct: 160 ------------------QPTMAVDTHIFRIGNRLGLAP-GKTPEKVEAGLVKIIPDEYM 200
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 201 RHAHHWLILHGRYVCKARKPECEVCVIADLC 231
>gi|448365104|ref|ZP_21553662.1| endonuclease III [Natrialba aegyptia DSM 13077]
gi|445656380|gb|ELZ09215.1| endonuclease III [Natrialba aegyptia DSM 13077]
Length = 227
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N +D L + + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNTETEHLFETYDGPEDYANAPQDELAEELNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACQTIVEEHDGEVPDTMDELTDLSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQELMELVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C+ C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCDDCVLADICPSEKGD 216
>gi|57641076|ref|YP_183554.1| endonuclease III [Thermococcus kodakarensis KOD1]
gi|57159400|dbj|BAD85330.1| endonuclease III [Thermococcus kodakarensis KOD1]
Length = 246
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLI--IPVGFWKTKAK 205
Y L+ ++S + +DEV + L + IE I NT + + + + VG WKTK +
Sbjct: 48 YRTLVHCIISQRMRDEVTYRVWEELFKKYKDIETIANTPVEEMQEFLRKQGVGLWKTKGE 107
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + Y +P+ I L KLPG+G K A++ + + +G
Sbjct: 108 WIVKASKIILERYGGKVPDDIHELMKLPGIGRKCANIVLAYGFG---------------- 151
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L + +P+
Sbjct: 152 -----------------KQAIP---VDTHVNRISKRLGLAPPRVAPEKVEEYLTALIPKE 191
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ IC+ P CE C ++ CP K
Sbjct: 192 KWIYVNHAMVDHGRSICRPINPKCEECPLREFCPYAK 228
>gi|407465823|ref|YP_006776705.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus sp. AR2]
gi|407049011|gb|AFS83763.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus sp. AR2]
Length = 216
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
E + +LI +LS++TKDE A+ L + + N + K+I +GF+ K
Sbjct: 30 ETGPFSILIGTILSARTKDEATTKAVKELFSKYKNPKELANAKIKDVEKIIKSIGFFHVK 89
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
+K I + I+ K Y +P+ +E L +LPGVG K A+ + +A+
Sbjct: 90 SKRIIEVAKIIDKKYKGKVPDNLETLVELPGVGRKTANCVLVYAF--------------- 134
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
EK P + VD+HVHRIS+RLG K PE+T +EL +
Sbjct: 135 -------------------EK--PAIPVDIHVHRISNRLGLVDT-KNPEETEQELMKKIQ 172
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ W ++N V +GQ ICK P C C K C
Sbjct: 173 KKYWIDINDTFVMYGQNICKPISPMCNVCKIKKSC 207
>gi|73668114|ref|YP_304129.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395276|gb|AAZ69549.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 38/214 (17%)
Query: 149 HVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+L++ +LS+Q+ D ++N K++ T E+ + L + GF+K+KAK+I
Sbjct: 52 ELLVATVLSAQSTDVQINRVTEKLFKKYR-TAEDYASADLRELENDLYSTGFYKSKAKNI 110
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A+ ++ + YN ++P T+E L LPGVG K A++ + A+G+V G+
Sbjct: 111 KTAAQMIVEKYNGEVPKTMEELTSLPGVGRKTANIVLARAFGVVEGVA------------ 158
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG TK P +++ S
Sbjct: 159 -----------------------VDTHVKRVSRRLGLTK-NSDPAKIEQDIVSLARREDL 194
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
++ L+ G+++C++++P C+ C+ KDLCP
Sbjct: 195 DSISMTLIYHGRKVCQAKKPKCKICIVKDLCPSS 228
>gi|257791041|ref|YP_003181647.1| endonuclease III [Eggerthella lenta DSM 2243]
gi|257474938|gb|ACV55258.1| endonuclease III [Eggerthella lenta DSM 2243]
Length = 220
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+QT D+ + L E T ++ + +I +GF+ TKA ++
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWERYPTPADLAAADVRDVEGIIRTIGFFHTKAANV 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +IP I+ L KLPGVG K A++ +N A+GIV GI
Sbjct: 98 IKCAQMVVADYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIA------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESL 326
VD HV RI+HRL + TP T L P
Sbjct: 146 -----------------------VDTHVFRIAHRLKFAGPSADTPAKTEAALLKLYPREY 182
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W +NH V FG++ C ++ P C TC DLCP K
Sbjct: 183 WGPINHQWVLFGRETCIARNPKCATCFLCDLCPSCGK 219
>gi|398784025|ref|ZP_10547333.1| endonuclease III [Streptomyces auratus AGR0001]
gi|396995473|gb|EJJ06487.1| endonuclease III [Streptomyces auratus AGR0001]
Length = 328
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 43/215 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + RL T E++ + L +LI P GF++ KAK +
Sbjct: 105 FELLVATVLSAQTTDLRVNQTTPRLFAVCPTPEDMAAMDPERLEELIRPTGFFRAKAKSL 164
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ + ++P +E L LPGVG K A++ + +A+G+
Sbjct: 165 LGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLGNAFGV----------------- 207
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK---ELESWLPE 324
P + VD H R++ R GWT T ED K ++ P+
Sbjct: 208 -------------------PGITVDTHFGRLARRFGWT----TAEDAEKVEADVAGIFPK 244
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S W+ ++H +V G+++C S++P+C C LCP
Sbjct: 245 SEWTMLSHRVVFHGRRVCHSRKPACGACAIAPLCP 279
>gi|332705408|ref|ZP_08425486.1| DNA lyase/endonuclease III [Moorea producens 3L]
gi|332355768|gb|EGJ35230.1| DNA lyase/endonuclease III [Moorea producens 3L]
Length = 238
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 40/221 (18%)
Query: 149 HVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+L++ +LS+Q DE VN G ++ + I + +VL L+ GF++ KAK+I
Sbjct: 39 QLLVATILSAQCTDERVNQVTPGLFRQFPDAVA-IASADIEVLETLVRSTGFYRNKAKNI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ A ++ K Y +P ++ L KLPGV K A++ + HA+GI G+
Sbjct: 98 QGACRMIVKEYGGQVPKQMDKLLKLPGVARKTANVVLAHAYGINQGV------------- 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG TK K P ++L LP+ W
Sbjct: 145 ----------------------TVDTHVKRLSQRLGLTK-HKDPIRIERDLMGLLPQQDW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+ L+ G+ ICK+++P C+ C+ DLC +LAE+
Sbjct: 182 ENWSIRLIYHGRAICKARKPDCDACVLADLC--ASADLAEK 220
>gi|317488242|ref|ZP_07946810.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325830754|ref|ZP_08164138.1| endonuclease III [Eggerthella sp. HGA1]
gi|316912654|gb|EFV34195.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325487161|gb|EGC89604.1| endonuclease III [Eggerthella sp. HGA1]
Length = 220
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+QT D+ + L E T ++ + +I +GF+ TKA ++
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWERYPTPADLAAADVRDVEGIIRTIGFFHTKAANV 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +IP I+ L KLPGVG K A++ +N A+GIV GI
Sbjct: 98 IKCAQMVVADYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIA------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESL 326
VD HV RI+HRL + TP T L P
Sbjct: 146 -----------------------VDTHVFRIAHRLKFAGPSADTPAKTEAALLKLYPREY 182
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W +NH V FG++ C ++ P C TC DLCP K
Sbjct: 183 WGPINHQWVLFGRETCIARNPKCATCFLCDLCPSCGK 219
>gi|427734976|ref|YP_007054520.1| DNA-(apurinic or apyrimidinic site) lyase [Rivularia sp. PCC 7116]
gi|427370017|gb|AFY53973.1| endonuclease III [Rivularia sp. PCC 7116]
Length = 240
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L E++ N + L L+ GF++ KAK+IK
Sbjct: 46 QLLVATILSAQCTDERVNKVTPELFRQFPDAESLGNAPIEELETLVRSTGFYRNKAKNIK 105
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A ++ +++++ +P T+E L LPGV K A++ M HA+GI G+
Sbjct: 106 AACQMIVRDFDSKVPRTMEQLLLLPGVARKTANVVMAHAFGINAGVT------------- 152
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV+R+S RLG TK + ++L LP++ W
Sbjct: 153 ----------------------VDTHVNRLSQRLGLTK-HEDAVRIERDLMKLLPQADWE 189
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+ L+ G+ +CK++ P+CE C DLCP K
Sbjct: 190 NWSIRLIYHGRAVCKARNPACEQCELADLCPTAPK 224
>gi|376295407|ref|YP_005166637.1| endonuclease III [Desulfovibrio desulfuricans ND132]
gi|323457968|gb|EGB13833.1| endonuclease III [Desulfovibrio desulfuricans ND132]
Length = 211
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 38/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ LS+Q DE + E +IE+ + +++ GF++ KAK+I
Sbjct: 31 WELLVATALSAQCTDERVNMVTPVFFERWPSIEDAAEADVAEIEEVVRSTGFFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K A+ + + YN ++P T+ L L GV K A + + +A+G+ GI
Sbjct: 91 KAAATRIMEVYNGEVPRTMAELITLGGVARKTASIVLANAFGVNEGIA------------ 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT-PEDTRKELESWLPESL 326
VD HV R++ R+G T KT P K+L P
Sbjct: 139 -----------------------VDTHVKRLAFRMGLTT--KTEPVQIEKDLMPLFPRET 173
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W +VNHLLV FG+++C +++P C+ C D+CP+
Sbjct: 174 WGDVNHLLVFFGREVCPARKPHCDVCELNDICPK 207
>gi|295697115|ref|YP_003590353.1| endonuclease III [Kyrpidia tusciae DSM 2912]
gi|295412717|gb|ADG07209.1| endonuclease III [Kyrpidia tusciae DSM 2912]
Length = 233
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q DE + G L T E+ S + L I G +KTK+K+I
Sbjct: 29 FELLVATILSAQCTDERVNLVTGPLFAKFPTAEDFARLSPEELEPHIQSCGLYKTKSKNI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A IL + Y +P + E L LPGVG K A + +++A+G+
Sbjct: 89 VSACRILVEEYGGQVPKSREALQALPGVGRKTASVVLSNAFGV----------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++RLG TPE+T ++L +P++ W
Sbjct: 132 -------------------PAIAVDTHVFRVANRLGLADA-TTPEETERQLMKRIPKAKW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S +H L+ G+QIC ++ P C+ C C
Sbjct: 172 SAAHHWLIHHGRQICSARSPGCDRCPLSRYC 202
>gi|158337187|ref|YP_001518362.1| endonuclease III [Acaryochloris marina MBIC11017]
gi|158307428|gb|ABW29045.1| endonuclease III [Acaryochloris marina MBIC11017]
Length = 224
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 36/224 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L E D L LI GF++ KAKHI+
Sbjct: 36 QLLVATILSAQCTDERVNQVTPALFEAYPDALAFAEADRDALETLIRSTGFYRNKAKHIQ 95
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + ++++ +PN ++LL LPGV K A++ + H +GI G+
Sbjct: 96 GACQKIVRDFDGQVPNQMDLLLTLPGVARKTANVVLAHGYGINMGVT------------- 142
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S+RLG T+ + P ++L LP+ W
Sbjct: 143 ----------------------VDTHVKRLSNRLGLTR-HQDPVKIEQDLMKLLPQEDWE 179
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKS 372
+ L+ G+ +C +++P+C+ C DLCP K R KS
Sbjct: 180 NWSIRLIYHGRAVCSARKPTCDRCSLTDLCPSAGKVTPARSAKS 223
>gi|238926207|ref|ZP_04657967.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
gi|238885887|gb|EEQ49525.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
Length = 210
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + GRL T I + L K I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDARVNVVTGRLFPKANTPAAIAVLGQAELEKEIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y+ ++P E L KLPGVG K A++ M+ A+
Sbjct: 92 IETCHILLDEYDGEVPADFEALQKLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+++RL V TP + K L+ +P W
Sbjct: 133 -----------------HMPAIAVDTHVFRVANRLRLA-VGTTPLEVEKGLQKVIPREDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S+ +H L+ G+Q+CK+++P C+TC +CP
Sbjct: 175 SDAHHWLILHGRQVCKARKPLCDTCALAQVCP 206
>gi|338532530|ref|YP_004665864.1| base excision DNA repair protein [Myxococcus fulvus HW-1]
gi|337258626|gb|AEI64786.1| base excision DNA repair protein [Myxococcus fulvus HW-1]
Length = 211
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L++ +LS +T+DEV+ A L + T E + S + + +I PV F + KA +
Sbjct: 29 FEQLVACILSIRTRDEVSLPASLALLQRAATPEALARLSPEDIDAIIQPVTFHEAKAWQL 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + ++P ++L GVGPK AHL A GI G
Sbjct: 89 HAIATRTRDEFGGELPCDAQVLQSFKGVGPKCAHL----ALGIACG-------------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IS VD+HVHR+++R G+ + +TPE T + LE+ LP + W
Sbjct: 131 HEAIS------------------VDIHVHRVTNRWGYVRA-RTPEATLEALEAVLPRAYW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
E+N LLV FG+ +C RP C TC C Q
Sbjct: 172 VELNRLLVPFGKHVCTGTRPRCSTCPVLRFCRQ 204
>gi|217967076|ref|YP_002352582.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
gi|217336175|gb|ACK41968.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
Length = 210
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT DE + +L + + E+ S + L + I V ++KTKAK+I
Sbjct: 30 WELLVATILSAQTTDERVNMVTEKLFKKYRSPEDYLKVSLEELEQDIRSVNYYKTKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + I+ + YN +P+T+E L KLPGV K A++ ++ G GK+E
Sbjct: 90 RACAQIIVEKYNGKVPDTMEELLKLPGVARKTANVVLS------AGYGKNEG-------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ +D HV+R+S RL K K + +EL +P+ W
Sbjct: 136 ---------------------IVIDTHVNRLSKRLNLGKE-KNRDKLEQELMKIVPKDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
+ ++LL+ G+ +CK++ P C+ C+ KD+CP E
Sbjct: 174 ANFSYLLIHHGRNVCKAKNPKCDECILKDICPSAFNE 210
>gi|448727672|ref|ZP_21710021.1| endonuclease III [Halococcus morrhuae DSM 1307]
gi|445789658|gb|EMA40337.1| endonuclease III [Halococcus morrhuae DSM 1307]
Length = 228
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 39/235 (16%)
Query: 128 VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSE 187
+DA D + ++D + R+ +L++++LS+Q D + L E + E N +
Sbjct: 19 LDAEYPDTTISLDFS---NRFELLVAVVLSAQCTDARVNETTDELFESYPSPEAFANAPQ 75
Query: 188 DVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHA 247
+ L + + + ++ KA +I+ ++ ++ + ++ ++P+T+ L +LPGVG K A++ + H
Sbjct: 76 EELAEALNSITYYNNKASYIRESAQLVVEEHDGEVPDTMGELTELPGVGRKTANVVLQHG 135
Query: 248 WGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV 307
+ +V GI VD HV R++ RLG T+
Sbjct: 136 YDVVEGI-----------------------------------VVDTHVQRLTRRLGLTEE 160
Query: 308 FKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ PE ++L ++P W HL + G+ C ++ P C C+ +D+CP K
Sbjct: 161 -QRPERIEEDLMEFVPTEHWQAFTHLFIDHGRATCTARNPECGDCVLEDICPSSK 214
>gi|429965677|gb|ELA47674.1| hypothetical protein VCUG_00875 [Vavraia culicis 'floridensis']
Length = 224
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 118/260 (45%), Gaps = 47/260 (18%)
Query: 111 KEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMG 170
KEVL I+E RK APVD MG E +++ L+ LMLS QT+D+ + +
Sbjct: 2 KEVLQVIKEQRKSLIAPVDTMGCS-CIPFTKDEEHKKFRTLVMLMLSQQTRDQTTYTTVH 60
Query: 171 RLKE-------HGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIP 223
L E G++ + S D L I V ++ KAK+IK+ ++ + +
Sbjct: 61 NLNESLVKKYNEGISPRTVSLLSLDELSSSIKAVNYYIKKAKNIKIIAEYF---LDKKMA 117
Query: 224 NTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCE 283
+ L KLPGVG K+A L + A GIG
Sbjct: 118 TEYDALIKLPGVGNKIAFLYLQIACNKTVGIG---------------------------- 149
Query: 284 KKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICK 343
VD HVHRI +RLG +TPE+TR +LE W E+N ++VGFGQ +C
Sbjct: 150 -------VDTHVHRIFNRLGIVTT-RTPEETRIKLEQIYDRREWKEINKVMVGFGQTVCL 201
Query: 344 SQRPSCETCLNKDLCPQGKK 363
++P C+ C+ C G+K
Sbjct: 202 PKKPKCKECVVNYCCKYGRK 221
>gi|302871735|ref|YP_003840371.1| endonuclease III [Caldicellulosiruptor obsidiansis OB47]
gi|302574594|gb|ADL42385.1| endonuclease III [Caldicellulosiruptor obsidiansis OB47]
Length = 202
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 41/217 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +L++Q+ DE + L + T+E+ L I PVGF+K KAK I
Sbjct: 22 YELLIATILAAQSTDERVNKITAELFKKYPTLESFAEADLSELENDIKPVGFYKNKAKSI 81
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + IL + YN +P TIE L KL GVG K A++ M + +G
Sbjct: 82 KETARILVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG------------------ 123
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELE--SWLPES 325
IP + VD H R+S+RLG + + T+ ELE +
Sbjct: 124 ------------------IPSIIVDTHCMRLSNRLGLV---NSKDATKIELELRDIVEPQ 162
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
L++ ++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 163 LYTIFSNLMVYHGRAVCKAIKPKCEVCTIKDVCKYFK 199
>gi|298241894|ref|ZP_06965701.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
gi|297554948|gb|EFH88812.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
Length = 232
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
++++ LS+Q DE + RL + ++E+ + S++ L + I GF++ KA++++
Sbjct: 46 LMVATQLSAQCTDERVNIVTARLFKKYRSVEDYASASQEELEQDIRSTGFYRNKARNLRS 105
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
A + Y+ ++P T+E L L GV K A++ + +A+GIV G
Sbjct: 106 ACQRILSEYHGEVPRTMEGLLSLAGVARKTANVVLGNAFGIVDG---------------- 149
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VD HV R+S RLGWT+ P +EL +P+ W +
Sbjct: 150 -------------------FVVDTHVGRLSRRLGWTQQ-TNPVKVEQELMRIIPQQDWLD 189
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
++HLL+ G+ IC +++P C C LCP
Sbjct: 190 LSHLLIFHGRAICDARKPLCTQCTLAVLCPSA 221
>gi|307943421|ref|ZP_07658765.1| endonuclease III [Roseibium sp. TrichSKD4]
gi|307773051|gb|EFO32268.1| endonuclease III [Roseibium sp. TrichSKD4]
Length = 272
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 119/264 (45%), Gaps = 51/264 (19%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K++++ A E+ R H D P D+ V Y +L++++LS+Q
Sbjct: 39 KRSRYSKAETAEIFQ-----RFHADNPEPEGELDY---------VNAYTLLVAVVLSAQA 84
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
D + A L + T + ED + + I +G +KTKAK++ + S+ L +++
Sbjct: 85 TDVGVNRATKNLFQIADTPAKMVALGEDRVREEIRTIGLFKTKAKNVILLSEQLIRDHGG 144
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
++P E L KLPGVG K A++ +N +G
Sbjct: 145 EVPEDREALEKLPGVGRKTANVVLNIFFGY------------------------------ 174
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQ 340
P + VD H+ R+S+R+G KTP D K LE +P+ +H L+ G+
Sbjct: 175 ------PTIAVDTHLFRLSNRIGMAP-GKTPLDVEKALEKVIPQEFSQHAHHWLILHGRY 227
Query: 341 ICKSQRPSCETCLNKDLCPQGKKE 364
ICK+++P C C+ DLC ++E
Sbjct: 228 ICKARKPECRRCVIYDLCRSPERE 251
>gi|300711590|ref|YP_003737404.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|448296302|ref|ZP_21486361.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|299125273|gb|ADJ15612.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|445581963|gb|ELY36310.1| endonuclease III [Halalkalicoccus jeotgali B3]
Length = 227
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L +E+ N +++ L + I + ++ KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNGVTADLFSKYDGLEDYANAAQEQLAEDISSITYYNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A I+ + ++ +P+T++ L LPGVG K A++ + H +V G+
Sbjct: 95 IREACAIIIEEHDGGVPDTMDELTDLPGVGRKTANVVLQHGHELVEGV------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ ++P+ +EL + LP
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEE-RSPQKIERELMALLPRER 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W HL + G+ C ++ P C C+ +D+CP K
Sbjct: 179 WQAFTHLCISHGRATCTARNPDCSDCVLEDVCPSSK 214
>gi|410478975|ref|YP_006766612.1| EndoIII-related endonuclease [Leptospirillum ferriphilum ML-04]
gi|406774227|gb|AFS53652.1| putative EndoIII-related endonuclease [Leptospirillum ferriphilum
ML-04]
Length = 225
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 93/205 (45%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +TKD V A RL E + ++ + LI PVGF++TKAK I
Sbjct: 43 YDVLIMTILSLRTKDSVTIPASQRLFEKAPDLPSLSQMKISDIESLIFPVGFYRTKAKTI 102
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++ + + IP+T+E L LPGVG K A+L + +
Sbjct: 103 KTIAERVLTEFGGKIPDTLEGLLSLPGVGLKTANLVLTVGF------------------- 143
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK+ CVD+HVHRI +R G + +P++T +E LP
Sbjct: 144 ---------------EKE--GFCVDIHVHRILNRWGVIQT-HSPDETYHIVEPVLPRKWK 185
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
N LLV FGQ C+ P C C
Sbjct: 186 RRANALLVAFGQHFCRPVSPFCSVC 210
>gi|428781526|ref|YP_007173312.1| endonuclease III [Dactylococcopsis salina PCC 8305]
gi|428695805|gb|AFZ51955.1| endonuclease III [Dactylococcopsis salina PCC 8305]
Length = 211
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 36/211 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L E + + + + LI GF++ KAK+I+
Sbjct: 34 QLLVATILSAQCTDERVNKVTPDLFARFPDAETMAKANREEIETLIRSTGFYRNKAKNIQ 93
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A +++ ++ +P+T+E L KLPGV K A++ + HA+G+ G+
Sbjct: 94 GACEMIVSDFQGKVPDTMEDLLKLPGVARKTANVVLAHAYGVNAGVT------------- 140
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+SHRLG T+ P+ K+L + LP+ W
Sbjct: 141 ----------------------VDTHVKRLSHRLGLTE-HNDPKRIEKDLMALLPQPDWE 177
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ L+ G+ +CK+++P CE C DLCP
Sbjct: 178 NWSIRLIYHGRAVCKAKQPLCEVCTLADLCP 208
>gi|448432322|ref|ZP_21585458.1| endonuclease III [Halorubrum tebenquichense DSM 14210]
gi|445687206|gb|ELZ39498.1| endonuclease III [Halorubrum tebenquichense DSM 14210]
Length = 227
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E+ N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNEVCADLFETYETPEDYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEEHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIERDLLDIVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ DLCP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCVLADLCPSEKGD 216
>gi|212224145|ref|YP_002307381.1| endonuclease III [Thermococcus onnurineus NA1]
gi|212009102|gb|ACJ16484.1| endonuclease III [Thermococcus onnurineus NA1]
Length = 243
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP--VGFWKTKAK 205
Y LI ++S + +DEV + +L E IE I T + + + VG WKTK +
Sbjct: 49 YRTLIHCIISQRMRDEVTYKVWEKLFEKYGDIETIARTPIEEMQTFLKENGVGLWKTKGE 108
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ K Y +P+ I L KLPG+G K A++ + + +G RQ I
Sbjct: 109 WIVKASQIILKEYGGKVPDDIHELMKLPGIGRKCANIVLAYGFG----------RQAI-- 156
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV+RIS RLG PE L +P
Sbjct: 157 ------------------------PVDTHVNRISKRLGLAPPRVQPERVEDYLRELIPRE 192
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER-VKKSPKK 375
W VNH +V G+ IC+ +P C+ C ++LCP K + + +K S KK
Sbjct: 193 KWIYVNHAMVDHGKTICRPIKPRCDECPLRELCPYSKGLVTDGDIKGSSKK 243
>gi|118444307|ref|YP_877476.1| endonuclease III [Clostridium novyi NT]
gi|118134763|gb|ABK61807.1| endonuclease III [Clostridium novyi NT]
Length = 207
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 39/206 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ MLS+Q DE + L + + E + +++ +G+ I G +K K+K+I
Sbjct: 30 YELLIATMLSAQCTDERVNVVTEELFKKYNSAEAMVTLTQEEIGEKIKSCGLYKNKSKNI 89
Query: 208 KMAS-DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
AS DIL K +N +PNT+E L LPGVG K A++ +++A+G
Sbjct: 90 LAASQDILNK-FNGKVPNTMEDLVSLPGVGRKTANVVLSNAFG----------------- 131
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
IP + VD HV R+S+R+G K K + KEL +P+
Sbjct: 132 -------------------IPAIAVDTHVFRVSNRIGIAK-GKNVDIVEKELMKNIPKEK 171
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETC 352
WS+ +H L+ G++ICK+++P C+ C
Sbjct: 172 WSDTHHYLIWHGRKICKARKPQCDQC 197
>gi|424869508|ref|ZP_18293209.1| Putative endonuclease III [Leptospirillum sp. Group II 'C75']
gi|124514281|gb|EAY55795.1| putative endonuclease III [Leptospirillum rubarum]
gi|387220626|gb|EIJ75278.1| Putative endonuclease III [Leptospirillum sp. Group II 'C75']
Length = 210
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 92/205 (44%), Gaps = 37/205 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y VLI +LS +TKD V A RL E + ++ + LI PVGF++TKAK I
Sbjct: 28 YDVLIMTILSLRTKDSVTIPASQRLFEKAPDLPSLSQMKISDIESLIFPVGFYRTKAKTI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K ++ + + IP+T+E L LPGVG K A+L + G K+
Sbjct: 88 KTIAERVLTEFGGKIPDTLEGLLSLPGVGLKTANLVLT------VGFEKE---------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
CVD+HVHRI +R G + +P++T +E LP
Sbjct: 132 --------------------GFCVDIHVHRILNRWGVIQT-HSPDETYHIVEPVLPRKWK 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETC 352
N LLV FGQ C+ P C C
Sbjct: 171 RRANALLVAFGQHFCRPVSPFCSVC 195
>gi|416351573|ref|ZP_11681156.1| endonuclease III [Clostridium botulinum C str. Stockholm]
gi|338195962|gb|EGO88188.1| endonuclease III [Clostridium botulinum C str. Stockholm]
Length = 208
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ MLS+Q DE + G L + + E + +++ LG+ I G +K K+K+I
Sbjct: 30 YELLIATMLSAQCTDERVNIVTGELFKEYNSPEKMITLTQEELGEKIKSCGLYKNKSKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS + Y+ +IP+ +E L +LPG+G K A++ +++A+GI
Sbjct: 90 LAASYEILNKYHGNIPDNMEQLIQLPGIGRKTANVVLSNAFGI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+R+G K K E EL +P+ W
Sbjct: 133 -------------------PAIAVDTHVFRVSNRIGIAK-GKNVEVVENELMKNIPKEKW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H L+ G++ICK+++P CE C C
Sbjct: 173 SDTHHYLIWHGRKICKARKPQCEICPVAPYC 203
>gi|334127981|ref|ZP_08501883.1| endonuclease III [Centipeda periodontii DSM 2778]
gi|333388702|gb|EGK59876.1| endonuclease III [Centipeda periodontii DSM 2778]
Length = 210
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + RL T E I + L K I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDVRVNIVTSRLFPRANTPEAIAALGQTELEKAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L +LPGVG K A++ M+ A+
Sbjct: 92 LETCDILLQEYGGEVPADFEALQRLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++RL V KTP + K L+ +P W
Sbjct: 133 -----------------HAPAIAVDTHVFRVANRLRLA-VGKTPLEVEKGLQKAIPRDDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S+ +H L+ G+Q+CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRQLCKARKPLCADCPLSPVCP 206
>gi|254385576|ref|ZP_05000901.1| endonuclease III [Streptomyces sp. Mg1]
gi|194344446|gb|EDX25412.1| endonuclease III [Streptomyces sp. Mg1]
Length = 284
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D VN + T E++ + + L ++I P GF++ K+K
Sbjct: 62 FELLVATVLSAQTTDLRVNQTTPALFAAY-PTPEDMAQAAPEALEEIIRPTGFFRAKSKS 120
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ S L+ N+ ++P IE L LPGVG K A++ + +A+G
Sbjct: 121 LLGLSQALRDNFGGEVPGRIEDLVSLPGVGRKTANVVLGNAFG----------------- 163
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD H R+ R WT+ + PE E+ + P+S
Sbjct: 164 -------------------VPGITVDTHFGRLVRRWKWTEQ-EDPEKVEAEICALFPKSE 203
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W+ ++H +V G++IC +++P+C C LCP
Sbjct: 204 WTMLSHRVVFHGRRICHARKPACGACPIAPLCP 236
>gi|256810186|ref|YP_003127555.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
gi|256793386|gb|ACV24055.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
Length = 344
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 120/227 (52%), Gaps = 42/227 (18%)
Query: 140 DIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGF 199
+IA + + VL+S ++S++TKDEV +L + +++++ N E+ L LI P GF
Sbjct: 19 EIARDRDPFKVLVSTIISARTKDEVTEEVSKKLFKEVKSVDDLLNIEEEKLADLIYPAGF 78
Query: 200 WKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDES 259
++ KAK++K + ILK+ YN +P+++E L KLPGVG K A+L + A+ KD
Sbjct: 79 YRVKAKNLKKLAKILKEKYNGKVPDSLEELLKLPGVGRKTANLVITLAF------DKD-- 130
Query: 260 RQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKEL 318
+CVD HVHRI +R W V +TPE+T EL
Sbjct: 131 ----------------------------GICVDTHVHRICNR--WEIVDTETPEETEFEL 160
Query: 319 ESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLN--KDLCPQGKK 363
LP+ W +N+LLV FG++IC S +P C C + CP +K
Sbjct: 161 RKKLPKKYWKVINNLLVVFGKEIC-SPKPKCNKCFEEIRKKCPYYEK 206
>gi|197118690|ref|YP_002139117.1| endonuclease III-like DNA glycosidase [Geobacter bemidjiensis Bem]
gi|197088050|gb|ACH39321.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter bemidjiensis Bem]
Length = 220
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 132 GWDHSANVDIAPEVRR-YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVL 190
GW A +A + R Y VL+S +LS +T+D+ A RL T + + S +
Sbjct: 21 GWVTPAVTIVATQDRDPYKVLVSCILSLRTRDQTTAEASQRLFALADTPQKMTELSVPEI 80
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
+ I PVGF++ KA+ I S + + + +P+ +E L GVG K A+L + +G
Sbjct: 81 EQAIYPVGFYRVKAQQILELSFQIGELHQGRVPDELETLLTFKGVGRKTANLVLTLGYGK 140
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
P +CVD+HVHRI +R G+ K
Sbjct: 141 ------------------------------------PGICVDIHVHRICNRWGYVKTVN- 163
Query: 311 PEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
PE T L LP W +N LLV FGQ C P C TC LC
Sbjct: 164 PEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSTCPLYALC 211
>gi|168185524|ref|ZP_02620159.1| endonuclease III [Clostridium botulinum C str. Eklund]
gi|169296265|gb|EDS78398.1| endonuclease III [Clostridium botulinum C str. Eklund]
Length = 208
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 41/207 (19%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y +LI+ MLS+Q DE VN KE+ + E + +++ +G+ I G +K K+K+
Sbjct: 30 YELLIATMLSAQCTDERVNVVTKELFKEYN-SAEAMVTLTQEEIGEKIKSCGLYKNKSKN 88
Query: 207 IKMAS-DILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS DIL K +N +P T+E L LPGVG K A++ +++A+
Sbjct: 89 ILAASYDILNK-FNGKVPRTMEELVSLPGVGRKTANVVLSNAF----------------- 130
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
K+P + VD HV R+S+R+G K K + KEL +P+
Sbjct: 131 -------------------KVPAIAVDTHVFRVSNRIGIAK-GKNVDIVEKELMKSIPKE 170
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETC 352
WS+ +H L+ G++ICK+++P CE C
Sbjct: 171 KWSDTHHYLIWHGRKICKARKPQCENC 197
>gi|336324330|ref|YP_004604297.1| DNA-(apurinic or apyrimidinic site) lyase [Flexistipes sinusarabici
DSM 4947]
gi|336107911|gb|AEI15729.1| DNA-(apurinic or apyrimidinic site) lyase [Flexistipes sinusarabici
DSM 4947]
Length = 227
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLIS ++S +TKD V A L E + N SED + I P GF++ KA I
Sbjct: 37 FRVLISTIISLRTKDSVTLKASESLFELAAEPVKMMNLSEDEIINAIYPAGFYRRKAVTI 96
Query: 208 K-MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
K + DI+++ ++ +P ++ L L GVG K A+L + V G D
Sbjct: 97 KDICKDIVER-FDGKVPADLDKLLSLKGVGRKTANLVL------VEGFEMD--------- 140
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+CVD HVHRI +R G+ K KTP++T L LP
Sbjct: 141 ---------------------AVCVDTHVHRICNRAGFVKT-KTPDETEMRLREILPVKY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W + N +LV +GQ++CK + P+C +C LC
Sbjct: 179 WKKWNEMLVSYGQKVCKPRGPTCSSCKLFHLC 210
>gi|312622309|ref|YP_004023922.1| endonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
gi|312202776|gb|ADQ46103.1| endonuclease III [Caldicellulosiruptor kronotskyensis 2002]
Length = 202
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +L++Q+ DE + L + T+E+ + L I PVGF+K KAK I
Sbjct: 22 YELLIATILAAQSTDERVNKITAELFKKYPTLESFAKANISELENDIKPVGFYKNKAKSI 81
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + I+ + YN +P TIE L KL GVG K A++ M + +G
Sbjct: 82 KETARIIVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG------------------ 123
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD H R+S+RLG K EL+ + L+
Sbjct: 124 ------------------IPSIIVDTHCKRLSNRLGLVNS-KDATKIEFELKKIVEPQLY 164
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ ++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 165 TIFSNLMVYHGRAVCKAIKPRCEVCTIKDVCEYFK 199
>gi|340345847|ref|ZP_08668979.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339520988|gb|EGP94711.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 217
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
E + +LI +LS++TKDE A+ L T + + N + K+I +GF+ K
Sbjct: 32 ETGNFSILIGTILSARTKDETTTKAVKMLFSKYKTPKELANAKVKDIEKIIRSIGFYHVK 91
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
++ I S I+ Y+ +P+T++ L +LPGVG K A+ + +A+ D+
Sbjct: 92 SRRIIEVSKIIDSKYSGIVPDTLDELIQLPGVGRKTANCVLVYAF--------DK----- 138
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
P + VD+HVHRIS+RLG K+PE+T L +P
Sbjct: 139 -----------------------PAIPVDIHVHRISNRLGLVNT-KSPEETELVLMKKIP 174
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ W ++N V +GQ ICK P C C K C
Sbjct: 175 KKYWIKINDTFVMYGQNICKPINPMCNVCKIKKNC 209
>gi|322369514|ref|ZP_08044079.1| endonuclease III [Haladaptatus paucihalophilus DX253]
gi|320551246|gb|EFW92895.1| endonuclease III [Haladaptatus paucihalophilus DX253]
Length = 228
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E ++E+ N D L + + + ++ KAK
Sbjct: 35 RLELLIAVMLSAQCTDERVNKETEHLFEKYESVEDYANADVDELAEDLNSITYYNNKAKW 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IHSACGTIIEEHDGEVPDTMSELTDLTGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ KTP+ +L +++PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-KTPQKIESDLMTFVPEED 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ C ++ P C C+ +D+CP K
Sbjct: 179 WQWLTHLFISHGRATCTARNPDCGDCILEDICPSSK 214
>gi|297572248|ref|YP_003698022.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
gi|296932595|gb|ADH93403.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
Length = 226
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D ++ L E + +VL ++ P+GF++ KA+ +
Sbjct: 47 FELLVATVLSAQTTDARVNSVTPNLFATFPNPETMAKAPLEVLEDILHPLGFYRAKARSL 106
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++ L + + ++P T+E L LPGVG K A++ + +A+G+
Sbjct: 107 NGLANGLMERFGGEVPGTLEELITLPGVGRKTANVVLGNAFGV----------------- 149
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S R WT+ P +L LP S W
Sbjct: 150 -------------------PGITVDTHVGRLSRRWAWTRE-TDPVKAEMDLAKILPHSEW 189
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ + H ++ G+++C S++P+CE C DLCP
Sbjct: 190 TIICHRVIDHGRRVCHSRKPACEACPMTDLCPS 222
>gi|335040513|ref|ZP_08533640.1| endonuclease III [Caldalkalibacillus thermarum TA2.A1]
gi|334179593|gb|EGL82231.1| endonuclease III [Caldalkalibacillus thermarum TA2.A1]
Length = 217
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I++MLS+Q D++ + L T E+ + L + I +G ++ KAK+I
Sbjct: 31 FELTIAVMLSAQCTDQMVNKVTKELFNKYRTPEDYVRVPLEELEQDIRQIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K IL + YN +IP + E L +LPG+G K A++ M+ A+G
Sbjct: 91 KKMCQILIEKYNGEIPRSREELVQLPGIGRKTANVIMSTAFGD----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++ RLG + TP K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVTKRLGICRWKDTPLQVEKTLMKKVPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+ +H L+ FG+ CK+Q P C C +LC +GKK L ++
Sbjct: 175 AITHHRLIFFGRYHCKAQNPQCHVCPLFELCREGKKRLNQK 215
>gi|189218449|ref|YP_001939090.1| endoIII-related endonuclease [Methylacidiphilum infernorum V4]
gi|189185307|gb|ACD82492.1| Predicted EndoIII-related endonuclease [Methylacidiphilum
infernorum V4]
Length = 232
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 36/211 (17%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
+LI+ +LS++ DE + +L E T E+ + S + L ++I +GF+KTKA++IK
Sbjct: 53 LLIATILSARCTDEQVNLVTAKLFEKYKTAEDYASASIEELERMIHSLGFYKTKARNIKN 112
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
++ +N +P ++ L +LPGVG K A++ + +A+GI GI
Sbjct: 113 TCRLIATKFNGQVPPQMDKLVELPGVGRKTANVVLGNAYGINEGI--------------- 157
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VD HV R+++RLG TK K PE +L +P+ W+
Sbjct: 158 --------------------VVDTHVSRVAYRLGLTKE-KQPEKIELDLMRCIPQESWTT 196
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++LL+ G++ CK++ P C C LCP+
Sbjct: 197 FSNLLIWHGRKRCKARNPDCLHCELNLLCPK 227
>gi|342216539|ref|ZP_08709186.1| endonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587429|gb|EGS30829.1| endonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 218
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+Q D VN K++ T ++ + L LI GF+K KAK+
Sbjct: 34 FEMLVATILSAQCTDVRVNMVTKEVYKKYK-TPQDFVDLGVQGLEPLIRSCGFYKNKAKN 92
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I + IL ++Y + +P TIE L KLPGVG K A++ + +G+
Sbjct: 93 IVATAKILVEDYQSQVPETIEELVKLPGVGQKTANVVASTCFGV---------------- 136
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+ VD HV R S+R+G K KT E+T +L+ +P+
Sbjct: 137 --------------------DAIAVDTHVFRTSNRIGLAKA-KTVEETEVQLQKAIPKDR 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W++ +HLL+ G++IC S+ P CE C ++C
Sbjct: 176 WTKTHHLLIFLGRRICASRSPKCEICPLTEVC 207
>gi|268317002|ref|YP_003290721.1| endonuclease III [Rhodothermus marinus DSM 4252]
gi|262334536|gb|ACY48333.1| endonuclease III [Rhodothermus marinus DSM 4252]
Length = 217
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS+QT D+ + L T E + + + L L+ P+G+++ KA+ I
Sbjct: 34 FELLIVTVLSAQTTDKKVNEVSPELFRRYPTAEALAQANPEELEPLLRPLGYYRQKARTI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + + ++P ++E L LPGVG K A + + A+GI GI
Sbjct: 94 VNLARQLVERHGGEVPRSMEALTALPGVGRKTAAIVLGTAFGIREGIA------------ 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R++ RLG T KTP+ ++L + +P W
Sbjct: 142 -----------------------VDTHVSRVAQRLGLTS-HKTPDKIEQDLMALVPREDW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ H LV G+ +C ++RP C C+ DLCP+
Sbjct: 178 TWFGHALVLHGRYVCLARRPRCSQCVLADLCPR 210
>gi|344996124|ref|YP_004798467.1| endonuclease III [Caldicellulosiruptor lactoaceticus 6A]
gi|343964343|gb|AEM73490.1| endonuclease III [Caldicellulosiruptor lactoaceticus 6A]
Length = 211
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 48/246 (19%)
Query: 117 IREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG 176
IRE+ K P + ++ + Y +LI+ +L++Q+ DE + L +
Sbjct: 11 IRELLKIYPQPSCTLNYN-----------KPYELLIATILAAQSTDERVNKITAELFKKY 59
Query: 177 LTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVG 236
T+E+ + L I PVGF+K KAK IK + IL + Y+ +P TIE L KL GVG
Sbjct: 60 PTLESFAEANISELENDIKPVGFYKNKAKSIKETARILVEKYSGTLPTTIEELVKLKGVG 119
Query: 237 PKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVH 296
K A++ M + +G IP + VD H
Sbjct: 120 RKTANVIMANIYG------------------------------------IPSIIVDTHCK 143
Query: 297 RISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKD 356
R+S+RLG K EL+ + L++ ++L+V G+ +CK+ +P CE C KD
Sbjct: 144 RLSNRLGLVNS-KDATKIEFELKKIVEPQLYTIFSNLMVYHGRAVCKAIKPKCEVCTIKD 202
Query: 357 LCPQGK 362
+C K
Sbjct: 203 VCEYFK 208
>gi|373461989|ref|ZP_09553722.1| endonuclease III [Prevotella maculosa OT 289]
gi|371950166|gb|EHO68024.1| endonuclease III [Prevotella maculosa OT 289]
Length = 236
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++ +LS+Q D+ + L H T E + + + +LI V + KA H+
Sbjct: 39 FQLIVATLLSAQCTDKRINMITPELFRHYPTAEAMAKADWEEIFQLIKSVSYPNAKAHHL 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +N ++P+ + L +LPGVG K A++ + W GK
Sbjct: 99 SEMAKMLVAQFNGEVPDNTDDLTRLPGVGRKTANV-VQAVW-----FGK----------- 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
P L VD HV R+SHRLG + TP EL ++PE
Sbjct: 142 -------------------PTLAVDTHVFRVSHRLGLVPETANTPLKVELELMKYIPEVD 182
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
S+ +H L+ G+ +CKSQ+P CE+C CP G K L ER KS K
Sbjct: 183 VSDAHHWLLLHGRYVCKSQKPQCESCPFNAFCPAGLKILKERAAKSSTAFK 233
>gi|384134331|ref|YP_005517045.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339288416|gb|AEJ42526.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 220
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ MLS+Q DE + RL E S D + + I VG +++K+KHI
Sbjct: 33 FELLVATMLSAQCTDERVNMVTPRLFAKYRGPEAFAKASPDEVAEDIREVGLFRSKSKHI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL Y ++PN+ + L +LPGVG K A++ +++A+G
Sbjct: 93 VETSRILVDVYGGEVPNSRDRLMELPGVGRKTANVVISNAYG------------------ 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P VD HV R+++R+G P T +++ + LP LW
Sbjct: 135 ------------------VPAFAVDTHVQRVTNRIGLAHS-SDPLKTEQQVCAKLPPELW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
++ +H L+ G+++C +++P C C DLC + +
Sbjct: 176 TKAHHALILHGRRVCTARKPKCHICPVADLCQYARSQ 212
>gi|389844120|ref|YP_006346200.1| endonuclease III [Mesotoga prima MesG1.Ag.4.2]
gi|387858866|gb|AFK06957.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Mesotoga prima MesG1.Ag.4.2]
Length = 220
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S +LS +T+DE A RL +++ + + L LI G ++ KA I
Sbjct: 29 FKVLVSTILSQRTRDENTEEASRRLFSVYPDPQSLIDAKPEDLYDLIKASGMYRQKAARI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +++ +P+T+E L +PGVG K A++ +N ++ K E+
Sbjct: 89 INCARMIVESFAGVVPDTLEELVTIPGVGRKTANIVLNVSF-------KKEA-------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HVHRI++RLGW K KTP+DT L LP S+W
Sbjct: 134 ---------------------LAVDTHVHRIANRLGWVKT-KTPDDTEFALMKILPPSIW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
VN +V FG++IC+ P C C C
Sbjct: 172 GPVNGSMVEFGREICRPIGPKCNLCGISQCC 202
>gi|295107016|emb|CBL04559.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Gordonibacter pamelaeae 7-10-1-b]
Length = 220
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+QT D+ + +L E T ++ + + +I +GF+ TKA ++
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPKLWERYPTPADLASADVRDVEDIIRTIGFFHTKAANV 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +IP I+ L KLPGVG K A++ +N A+GIV GI
Sbjct: 98 IKCAQMVVTDYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIA------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESL 326
VD HV RI+HRL + TP T L P
Sbjct: 146 -----------------------VDTHVFRIAHRLKFAGPSADTPAKTETALLKLYPREY 182
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W +NH V FG++ C ++ P C C DLCP K
Sbjct: 183 WGPINHQWVLFGRETCIARSPKCGECFICDLCPSCGK 219
>gi|257051671|ref|YP_003129504.1| endonuclease III [Halorhabdus utahensis DSM 12940]
gi|256690434|gb|ACV10771.1| endonuclease III [Halorhabdus utahensis DSM 12940]
Length = 228
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L++++LS+Q DE + L E T E+ E+ L + I + F KA +
Sbjct: 35 RLELLVAVVLSAQCTDERVNETTPELFETYQTPEDYAAADEEQLAEDIYGITFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+K +IL + ++ ++P+T++ L LPGVG K A++ + H +V GI
Sbjct: 95 LKGIGEILVEEHDGEVPDTMDALTALPGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + P+ +L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGLTEEER-PDAIEDDLMEIIPEDE 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W HL++ G+ +C ++ P C C +D+CP K
Sbjct: 179 WQAFTHLMISHGRAVCTARNPDCGDCALEDVCPSSK 214
>gi|448495548|ref|ZP_21610007.1| endonuclease III [Halorubrum californiensis DSM 19288]
gi|445688074|gb|ELZ40346.1| endonuclease III [Halorubrum californiensis DSM 19288]
Length = 227
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E N S+D L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYDGPEEYANASQDELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIVEEHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEAER-PEAIEQDLLDIVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCVLADVCPSEKGD 216
>gi|393796715|ref|ZP_10380079.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 175
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
+S++TKDE A+ L + + N + K+I +GF+ K+K I + I+
Sbjct: 1 MSARTKDETTTKAVKVLFSKYKNAKELANAKTKDVEKIIKSIGFYHVKSKRIIEVAKIIN 60
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
Y +P+ +E L +LPGVG K A+ + +A+ D+
Sbjct: 61 SKYKGKVPDNLEKLVELPGVGRKTANCVLVYAF--------DK----------------- 95
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLV 335
P + VD+HVHRIS+RLG KTPE+T +EL +P+ W ++N V
Sbjct: 96 -----------PAIPVDIHVHRISNRLGLVDT-KTPEETEQELMRIIPKKFWIDINDTFV 143
Query: 336 GFGQQICKSQRPSCETCLNKDLC 358
+GQ ICK P C C K+ C
Sbjct: 144 MYGQNICKPISPMCSVCKIKNDC 166
>gi|428206537|ref|YP_007090890.1| endonuclease III [Chroococcidiopsis thermalis PCC 7203]
gi|428008458|gb|AFY87021.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Chroococcidiopsis thermalis PCC 7203]
Length = 231
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 44/228 (19%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V A G+ + E + + LI GF++ KA
Sbjct: 39 QLLVATILSAQCTDERVNLVTPALFGQFPDA----EALAKAEPVEIENLIRSTGFYRNKA 94
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I+ A IL Y +P ++E L +LPGV K A++ + HA+GI G+
Sbjct: 95 KNIQAACRILVAEYGGQVPPSMEQLLRLPGVARKTANVVLAHAFGINAGVT--------- 145
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R+S+RLG TK P ++L LP
Sbjct: 146 --------------------------VDTHVKRLSYRLGLTK-NTDPIHIERDLIRLLPS 178
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKS 372
W + ++ G+ ICK++ P+C+ CL DLCP L + + S
Sbjct: 179 DDWENFSIRIIYHGRAICKARNPACQACLLSDLCPSADLPLLDEIPPS 226
>gi|345862301|ref|ZP_08814530.1| endonuclease III [Desulfosporosinus sp. OT]
gi|344324588|gb|EGW36137.1| endonuclease III [Desulfosporosinus sp. OT]
Length = 214
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+Q DE VN + E T E I + L I +G + KAK+
Sbjct: 33 FELLIATILSAQCTDERVNLVTVSLFAETN-TPEEILALGQIELENRIRSLGLYHNKAKN 91
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I A ++ +++ +PN I+ L KLPGVG K A++ ++A+GI
Sbjct: 92 ILAACRVIVEDFAGLVPNDIDSLRKLPGVGRKTANVVASNAFGI---------------- 135
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P L VD HV R++HRLG KTPE +EL P
Sbjct: 136 --------------------PALAVDTHVFRVAHRLGIANG-KTPEKVEEELLRIFPRER 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W++V+HLL+ G++IC +++P+CE C +C
Sbjct: 175 WTQVHHLLIFHGRRICVARKPNCEECPLTVVC 206
>gi|448310828|ref|ZP_21500607.1| endonuclease III [Natronolimnobius innermongolicus JCM 12255]
gi|445607176|gb|ELY61069.1| endonuclease III [Natronolimnobius innermongolicus JCM 12255]
Length = 227
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNTETEHLFEKYGGAEDYANAPEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGLTEE-QRPEAIEQELMEIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCSDCVLADICPSAKGD 216
>gi|452993283|emb|CCQ95253.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Clostridium ultunense Esp]
Length = 217
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 39/219 (17%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+Q D +VN KE T E+ +E+ LG+ I GF+KTK+K+
Sbjct: 34 FELLVATILSAQCTDVQVNKTTEKLFKEFK-TPEDYLKLTEEELGQKIRSCGFYKTKSKN 92
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I +L + +N ++P T+E L LPGVG K A++ +++A+
Sbjct: 93 ILATCRLLIEKFNGEVPGTLEELITLPGVGRKTANVVLSNAFS----------------- 135
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + V HV R+S+R+G K DT K+L + + +
Sbjct: 136 -------------------KPAIAVGTHVFRVSNRIGLADS-KNVLDTEKDLMDNIDKEM 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
WS+ +HLL+ G++ICK++RP C+ C D C ++E+
Sbjct: 176 WSKAHHLLIFHGRRICKARRPLCDKCPLTDYCFYYREEV 214
>gi|384916798|ref|ZP_10016943.1| Endonuclease III [Methylacidiphilum fumariolicum SolV]
gi|384525758|emb|CCG92816.1| Endonuclease III [Methylacidiphilum fumariolicum SolV]
Length = 225
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 36/211 (17%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
+LI+ +LS++ DE + +L + T + + L I +GF+KTKAK+IK
Sbjct: 46 LLIATILSARCTDEQVNLVTAKLFQKYHTAADYAAAPIEELENAIHSLGFYKTKAKNIKN 105
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
A IL N ++P+ +E L LPGVG K A++ + +A+GI GI
Sbjct: 106 ACQILASQCNGEVPSQMEKLVNLPGVGRKTANVVLGNAFGINDGI--------------- 150
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VD HV R+S RLG T+ K PE ++L +P+ W+E
Sbjct: 151 --------------------VVDTHVSRVSFRLGLTQE-KQPEKIEQDLMRCIPKESWTE 189
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++L++ G++ CK++ P C C +LCP+
Sbjct: 190 FSNLIIWHGRKRCKARNPDCPHCELNELCPK 220
>gi|448362821|ref|ZP_21551425.1| endonuclease III [Natrialba asiatica DSM 12278]
gi|445647443|gb|ELZ00417.1| endonuclease III [Natrialba asiatica DSM 12278]
Length = 227
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ +D L + + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNTETEHLFETYDGPEDYATAPQDELAEELNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACQTIVEEHDGEVPDTMDELTDLSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIERELMELVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C+ C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCDDCVLADICPSEKGD 216
>gi|448590082|ref|ZP_21650141.1| endonuclease III [Haloferax elongans ATCC BAA-1513]
gi|445735197|gb|ELZ86750.1| endonuclease III [Haloferax elongans ATCC BAA-1513]
Length = 227
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 38/217 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E E N +D L + I + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKVTAELFEKYDGPEEYANADQDELAEDINSITYYNNKAKY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I+ A +DI++K ++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACTDIVEK-HDGEVPDTMSKLTDLAGVGRKTANVVLQHGHDIVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T+ ++L +PES
Sbjct: 143 ------------------------VVDTHVQRLSRRLGLTEEEYPER-IEEDLMPVVPES 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ +C ++ P C+ C+ +D+CP K
Sbjct: 178 DWQQFTHLFISHGRAVCDARNPDCDDCVLEDICPSSK 214
>gi|126658588|ref|ZP_01729735.1| endonuclease III [Cyanothece sp. CCY0110]
gi|126620175|gb|EAZ90897.1| endonuclease III [Cyanothece sp. CCY0110]
Length = 212
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 36/210 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LI+ +LS+Q DE + L E++ N +VL LI GF++ KAK+I+
Sbjct: 35 QLLIATILSAQCTDERVNKVTPELFARFPDAESLANADREVLETLIRSTGFYRNKAKNIQ 94
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + +++N +P T+E L LPGV K A++ + HA+GI G+
Sbjct: 95 GACQKIIEDFNGKVPRTMEELLLLPGVARKTANVVLAHAFGINAGVT------------- 141
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG TK P K+L LP+ W
Sbjct: 142 ----------------------VDTHVKRLSQRLGLTKA-TDPVKIEKDLMGLLPQEDWE 178
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ ++ G+QICK++ P+C+ C LC
Sbjct: 179 NFSIRIIYHGRQICKARTPNCQECKLAYLC 208
>gi|254472102|ref|ZP_05085502.1| endonuclease III [Pseudovibrio sp. JE062]
gi|211958385|gb|EEA93585.1| endonuclease III [Pseudovibrio sp. JE062]
Length = 239
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L + T E + ED + + I +G +K KAK+
Sbjct: 55 FTLLVAVVLSAQATDAGVNKATKHLFQIADTPEKMVALGEDKIREEIRTIGLYKNKAKNT 114
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + + +P T E L LPGVG K A++ +N A+G
Sbjct: 115 FLLSQMLIEQHGGQVPQTREELEALPGVGRKTANVVLNIAFGQ----------------- 157
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H+ RI++RLG KTP D K+LE +P+
Sbjct: 158 -------------------PTIAVDTHLFRIANRLGLAP-GKTPLDVEKKLEKVIPQDFM 197
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H L+ G+ ICK+++P+C+ C+ DLC +K L
Sbjct: 198 QHAHHWLILHGRYICKARKPACDRCIIYDLCKSKEKIL 235
>gi|323331684|gb|EGA73098.1| Ntg2p [Saccharomyces cerevisiae AWRI796]
Length = 195
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 92/213 (43%), Gaps = 58/213 (27%)
Query: 107 PAHWKEVLNNIREMRKHGDAPVDAMGWDH------------SANVDIAPEVRRYHVLISL 154
P + + N +R MR PVDAMG S VD P+ R LI
Sbjct: 10 PESFLPIYNRVRLMRSKVKTPVDAMGCSMIPVLVSNKCGIPSEKVD--PKNFRLQFLIGT 67
Query: 155 MLSSQTKDEVNHAAMGRLKEH---------GLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
MLS+QT+DE A + E+ G+T++ + E VL LI V F+ KA
Sbjct: 68 MLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANLIRCVSFYTRKAN 127
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK + +L N+++DIP IE + LPGVGPKM +L + WG++ GI
Sbjct: 128 FIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVGI----------- 176
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRI 298
CVDVHVHR+
Sbjct: 177 ------------------------CVDVHVHRL 185
>gi|108759213|ref|YP_634549.1| base excision DNA repair protein [Myxococcus xanthus DK 1622]
gi|108463093|gb|ABF88278.1| base excision DNA repair protein, HhH-GPD family [Myxococcus
xanthus DK 1622]
Length = 240
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L++ +LS +T+DEV+ L + T E + S + + LI PV F + KA +
Sbjct: 58 FEQLVACILSIRTRDEVSLPVSLALLQRASTPEALARMSPEDIDALIQPVTFHEAKAWQL 117
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + +P ++L GVGPK AHL A GI G
Sbjct: 118 HAIATRTRDEFGGALPCDAQVLQSFKGVGPKCAHL----ALGIACG-------------- 159
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IS VD+HVHR+++R G+ + +TPE T + LE+ LP + W
Sbjct: 160 HEAIS------------------VDIHVHRVTNRWGYVQA-RTPEATMEALEAVLPRAWW 200
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
E+N LLV FG+ +C RP C TC C Q
Sbjct: 201 VELNRLLVPFGKHVCTGTRPKCSTCPVLSFCRQ 233
>gi|407473538|ref|YP_006787938.1| endonuclease III [Clostridium acidurici 9a]
gi|407050046|gb|AFS78091.1| endonuclease III [Clostridium acidurici 9a]
Length = 213
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 43/219 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D+ + +L + T E+ E L LI GF++ K+K I
Sbjct: 33 FELLVATILSAQCTDKRVNIVTEKLFKDYNTPEDFLKLKEGELELLIKSTGFYRNKSKSI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL YN+ +P+T E L KLPGVG K A++ M++A+G ++ I
Sbjct: 93 LGTSRILVDKYNSQVPDTREELMKLPGVGRKTANVVMSNAFG----------KEAI---- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW---TKVFKTPEDTRKELESWLPE 324
VD HV R+S+R+G + V KT ED K +PE
Sbjct: 139 ----------------------AVDTHVFRVSNRIGLANSSNVDKTEEDLMKN----IPE 172
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+ WS+ +HLL+ G++ICK++ P CE C + +C KK
Sbjct: 173 NEWSKAHHLLIFHGRRICKARNPQCELCPLRGVCFYYKK 211
>gi|429735979|ref|ZP_19269899.1| endonuclease III [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156537|gb|EKX99166.1| endonuclease III [Selenomonas sp. oral taxon 138 str. F0429]
Length = 210
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + RL + T E I + L I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDVRVNLVTSRLFPYANTPEAIAALGQTKLEAAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P + L +LPGVG K A++ M+ A+
Sbjct: 92 LETCDILLREYGGEVPADFDALQRLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+RL V KTP + K L+ +P W
Sbjct: 133 -----------------HAPAIAVDTHVFRVSNRLRLA-VGKTPLEVEKGLQKAIPREDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S+ +H L+ G+Q+CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRQLCKARKPLCGQCPLAPICP 206
>gi|42520628|ref|NP_966543.1| endonuclease III [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99036070|ref|ZP_01315105.1| hypothetical protein Wendoof_01000051 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410367|gb|AAS14477.1| endonuclease III [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 212
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 43/217 (19%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+ Y +L++++LS++T D + L T E + N ++ L K + +G + +KA
Sbjct: 27 INHYTLLVAIVLSARTTDVSVNKITRELFNIADTPEKMLNLGQNELKKRVNSIGLYNSKA 86
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I S IL + YN+ +P + L LPGVG K A++ +N GI
Sbjct: 87 KNIIGLSKILIERYNSKVPTDFDDLVSLPGVGRKSANVFLNSGLGI-------------- 132
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESW 321
P L VD HV R+S+R+G K VFKT + L +
Sbjct: 133 ----------------------PTLAVDTHVFRVSNRIGLVKEKDVFKTEQS----LLNV 166
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+P+ +H LV G+ +CK+Q+PSCETC+ DLC
Sbjct: 167 VPKKYLLYAHHWLVLHGRYVCKAQKPSCETCIIHDLC 203
>gi|317486241|ref|ZP_07945074.1| endonuclease III [Bilophila wadsworthia 3_1_6]
gi|316922487|gb|EFV43740.1| endonuclease III [Bilophila wadsworthia 3_1_6]
Length = 216
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +L++Q D+ + L + + L ++I VGF+ +KAKH+
Sbjct: 36 WELLVATVLAAQCTDKRVNQVTPELFRRWPDPAALAQATIPELEEVIHSVGFYHSKAKHL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ ++ K +N + PNT++ L KLPGV K A++ + WG G G +E
Sbjct: 96 IAAAQLVVKEFNGETPNTMKDLIKLPGVARKTANVVL---WG---GFGINEG-------- 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HV RIS RLG TK P D K+L P+S W
Sbjct: 142 ---------------------LAVDTHVKRISGRLGLTK-HTDPVDIEKDLVKLFPQSEW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+VNH +V FG+ +C +++P C+ C CP+
Sbjct: 180 GKVNHRMVWFGRHVCDARKPLCDECEMAPFCPK 212
>gi|167043370|gb|ABZ08073.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_ANIW141O9]
Length = 217
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++T+DE A+ L + T + + N + K+I VGF+ K++ I
Sbjct: 35 FKILIGTVLSARTRDENTTKAVKGLFKVYNTPQKLANAKAKDVEKIIKSVGFYHVKSRRI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++I+ Y+ +P I+ L ++PGVG K A+ + +A+
Sbjct: 95 IEVANIILTKYHGKVPADIDKLVEIPGVGRKTANCVLVYAF------------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK P + VD HVHRIS+RLG KTPE+T EL +P+ W
Sbjct: 136 ---------------EK--PAIPVDTHVHRISNRLGLVDT-KTPEETEMELRKKVPKKYW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N+ V +GQ ICK P C C ++ C
Sbjct: 178 LPINNTFVMYGQNICKPISPMCSVCKIRNSC 208
>gi|399575291|ref|ZP_10769049.1| endonuclease III [Halogranum salarium B-1]
gi|399239559|gb|EJN60485.1| endonuclease III [Halogranum salarium B-1]
Length = 228
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L+++MLS+Q DE + L E E+ + + L + I + ++ K+K
Sbjct: 35 RLELLVAVMLSAQCTDERVNKVTADLFEKYHGAEDFVSVPREELAEDISSITYFNNKSKW 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + ++ ++P+T++ L L GVG K A++ + HA +V GI
Sbjct: 95 IQSACQTIIDEHDGEVPDTMKELTDLTGVGRKTANVVLQHAHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RIS RLG T+ + PE+ ++L + +PE
Sbjct: 143 -----------------------VVDTHVQRISRRLGITEE-EYPENIEQDLMTVVPEDD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W E HL + G+ C + P C C+ +DLCP K++
Sbjct: 179 WQEFTHLFISHGRATCTAINPECSDCVLEDLCPSSKED 216
>gi|448352032|ref|ZP_21540825.1| endonuclease III [Natrialba taiwanensis DSM 12281]
gi|445632114|gb|ELY85333.1| endonuclease III [Natrialba taiwanensis DSM 12281]
Length = 227
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N ++ L + + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNTETEHLFETYDGPEDYANAPQNELAEELNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACQTIVEEHDGEVPDTMDELTDLSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQELMELVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C+ C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCDDCVLADICPSEKGD 216
>gi|374328674|ref|YP_005078858.1| Endonuclease III [Pseudovibrio sp. FO-BEG1]
gi|359341462|gb|AEV34836.1| Endonuclease III [Pseudovibrio sp. FO-BEG1]
Length = 239
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L + T E + ED + + I +G +K KAK+
Sbjct: 55 FTLLVAVVLSAQATDAGVNKATKHLFQIADTPEKMVALGEDKIREEIRTIGLYKNKAKNT 114
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + + +P T E L LPGVG K A++ +N A+G
Sbjct: 115 FLLSQMLIEQHGGQVPQTREELEALPGVGRKTANVVLNIAFGQ----------------- 157
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H+ RI++RLG KTP D K+LE +P+
Sbjct: 158 -------------------PTIAVDTHLFRIANRLGLAP-GKTPLDVEKKLEKVIPQDFM 197
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H L+ G+ ICK+++P+C+ C+ DLC +K L
Sbjct: 198 QHAHHWLILHGRYICKARKPACDRCIIYDLCKSKEKIL 235
>gi|344211668|ref|YP_004795988.1| endonuclease III [Haloarcula hispanica ATCC 33960]
gi|343783023|gb|AEM57000.1| endonuclease III [Haloarcula hispanica ATCC 33960]
Length = 227
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 45/244 (18%)
Query: 121 RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIE 180
R H + P A+ ++S R +LI+++LS+Q DE + L E + E
Sbjct: 18 RLHEEYPDSAISLNYS---------NRLELLIAVVLSAQCTDERVNEVTADLFEKYQSAE 68
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
+ +E+ L + I + F K +++ +IL + ++ ++P+T+ L LPGVG K A
Sbjct: 69 DYAEATEEQLAEDIYGITFHNNKGGYLQGIGEILAEEHDGEVPDTMSALTDLPGVGRKTA 128
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
++ + H IV GI VD HV R+S
Sbjct: 129 NVVLQHGHDIVEGI-----------------------------------VVDTHVQRLSR 153
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
RLG T+ + PE ++L +P W + HLL+ G+ +C ++ C C+ D+CP
Sbjct: 154 RLGLTEE-ERPEAIEQDLLDVVPSDEWQQFTHLLIDHGRAVCGARSAECGACVLADICPS 212
Query: 361 GKKE 364
K +
Sbjct: 213 EKGD 216
>gi|403744726|ref|ZP_10953877.1| endonuclease III [Alicyclobacillus hesperidum URH17-3-68]
gi|403121904|gb|EJY56163.1| endonuclease III [Alicyclobacillus hesperidum URH17-3-68]
Length = 236
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 39/231 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ MLS+Q D + RL + + + + + I VG ++TKA++I
Sbjct: 43 FELLIATMLSAQCTDARVNMVTARLFQKYQGPRAFATATPEQMAEDIREVGLFRTKAQNI 102
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + Y ++P E L +LPGVG K A++ +++A+GI
Sbjct: 103 VATARILLEKYGGEVPKNREQLVELPGVGRKTANVVLSNAFGI----------------- 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P VD HV R+++R+G K P T ++ LP +W
Sbjct: 146 -------------------PAFAVDTHVQRVTNRIGIVKS-DDPLKTEEQACRKLPREMW 185
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
++ +HL + G+QIC +++P C+ C +LC ++++ R+ ++RK+
Sbjct: 186 TQAHHLFIHHGRQICVARKPKCDICPVSELCHYAREQV--RLAAGNQRRKA 234
>gi|224367145|ref|YP_002601308.1| protein NthA [Desulfobacterium autotrophicum HRM2]
gi|223689861|gb|ACN13144.1| NthA [Desulfobacterium autotrophicum HRM2]
Length = 221
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 40/214 (18%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS++TKDE AA RL + + + S + LI PVGF+ +K+ ++
Sbjct: 35 FRILVATILSARTKDETTAAACKRLFKKAPDVNALAGLSRQEISDLIYPVGFYTSKSGYL 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ ++ +P I+ L LPGVG K A+L M+ A+
Sbjct: 95 ERLPKAMEA-FDGKVPQNIDDLVTLPGVGRKTANLVMSVAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKV-FKTPEDTRKELESWLPESL 326
K +CVD HVHRI + W V + P +T L LP L
Sbjct: 135 -----------------KKDAICVDTHVHRIMNL--WEYVDTRNPLETEMALRKKLPPKL 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W VN +LV FGQ C+ C+ C+ + +CP+
Sbjct: 176 WQRVNAILVAFGQGTCRPVGSHCDVCVLESMCPK 209
>gi|397774996|ref|YP_006542542.1| endonuclease III [Natrinema sp. J7-2]
gi|397684089|gb|AFO58466.1| endonuclease III [Natrinema sp. J7-2]
Length = 227
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ +D L + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNQETDHLFEKYDGAEDYATAEQDELAADLDSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACESILEDHDGEVPDTMAELTDLSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + P+ +L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPDRIEVDLMEIVPEDG 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W E HL + G+ C +Q P C C+ DLCP K +
Sbjct: 179 WQEFTHLCIDHGRATCTAQNPDCGDCVLADLCPSAKGD 216
>gi|345887973|ref|ZP_08839106.1| endonuclease III [Bilophila sp. 4_1_30]
gi|345041239|gb|EGW45420.1| endonuclease III [Bilophila sp. 4_1_30]
Length = 211
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +L++Q D+ + L + + L ++I VGF+ +KAKH+
Sbjct: 31 WELLVATVLAAQCTDKRVNQVTPELFRRWPDPAALAQATIPELEEVIHSVGFYHSKAKHL 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ ++ K +N + PNT++ L KLPGV K A++ + WG G G +E
Sbjct: 91 IAAAQLVVKEFNGETPNTMKDLIKLPGVARKTANVVL---WG---GFGINEG-------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HV RIS RLG TK P D K+L P+S W
Sbjct: 137 ---------------------LAVDTHVKRISGRLGLTK-HTDPVDIEKDLVKLFPQSEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+VNH +V FG+ +C +++P C+ C CP+
Sbjct: 175 GKVNHRMVWFGRHVCDARKPLCDECEMAPFCPK 207
>gi|448343824|ref|ZP_21532741.1| endonuclease III [Natrinema gari JCM 14663]
gi|445621907|gb|ELY75372.1| endonuclease III [Natrinema gari JCM 14663]
Length = 227
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ +D L + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNQETEHLFEKYDGAEDYATAEQDELATDLNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACESILEDHDGEVPDTMAELTDLSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + P+ ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPDRIEEDLMEIVPEDG 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W E HL + G+ C +Q P C C+ DLCP K +
Sbjct: 179 WQEFTHLCIDHGRATCTAQNPDCGDCVLADLCPSSKGD 216
>gi|427729388|ref|YP_007075625.1| DNA-(apurinic or apyrimidinic site) lyase [Nostoc sp. PCC 7524]
gi|427365307|gb|AFY48028.1| endonuclease III [Nostoc sp. PCC 7524]
Length = 227
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L ++ N L L+ GF++ KAK+I+
Sbjct: 46 QLLVATILSAQCTDERVNQVTPVLFSRFPDAASLGNADLAELETLVRSTGFYRNKAKNIQ 105
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A ++ +++ +PNT+E L KLPGV K A++ + HA+GI G+
Sbjct: 106 AACRMIVSEFDSVVPNTMEQLLKLPGVARKTANVVLAHAYGINAGVT------------- 152
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG TK + P K+L LP+ W
Sbjct: 153 ----------------------VDTHVKRLSQRLGLTK-YADPIHIEKDLMKLLPQPDWE 189
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ ++ G+ +CK++ P+CE C DLCP
Sbjct: 190 NWSIRIIYHGRAVCKARSPACEACELADLCPTA 222
>gi|341583175|ref|YP_004763667.1| endonuclease III [Thermococcus sp. 4557]
gi|340810833|gb|AEK73990.1| endonuclease III [Thermococcus sp. 4557]
Length = 238
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLII--PVGFWKTKAK 205
Y L+ ++S + +DEV + RL E I I +T + + + + VG WKTK +
Sbjct: 49 YRTLVHCIISQRMRDEVTYKVWERLFEKYGDIHRIADTPVEEMQEFLRKNGVGLWKTKGE 108
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I AS I+ + Y +P+ I+ L KLPG+G K A++ + + +G RQ I
Sbjct: 109 WIVKASQIILEKYGGKVPDDIKELMKLPGIGRKCANIVLAYGFG----------RQAI-- 156
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV+RIS RLG PE + L +P
Sbjct: 157 ------------------------PVDTHVNRISKRLGLAPPRVQPEKVEEYLAELIPYE 192
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W VNH +V G+ IC+ P C+ C ++LCP K
Sbjct: 193 KWIYVNHAMVDHGKSICRPIGPKCDECPLRELCPYAK 229
>gi|313891859|ref|ZP_07825464.1| endonuclease III [Dialister microaerophilus UPII 345-E]
gi|329121043|ref|ZP_08249674.1| endonuclease III [Dialister micraerophilus DSM 19965]
gi|313119853|gb|EFR43040.1| endonuclease III [Dialister microaerophilus UPII 345-E]
gi|327471205|gb|EGF16659.1| endonuclease III [Dialister micraerophilus DSM 19965]
Length = 213
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D+ + R+ T + S+ L K I G +K+KAKH+
Sbjct: 32 FTLLVAVILSAQCTDKRVNIITKRIFPKLDTPAKMVKLSQSELEKEIRDCGLYKSKAKHL 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++L K YN ++P++ E L KLPGVG K A++ + AWG
Sbjct: 92 LGMCNVLLKEYNGEVPHSFEDLIKLPGVGRKTANVVRSVAWGY----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+RL K K P D EL+ +P+ W
Sbjct: 135 -------------------PAIAVDTHVFRVSNRLNLAK-GKKPLDVELELQKTVPKEKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
S +H L+ G++ C ++ P C+ C D+CP
Sbjct: 175 SACHHWLIWHGRKFCHARNPDCKNCFLSDVCP 206
>gi|435846406|ref|YP_007308656.1| endonuclease III [Natronococcus occultus SP4]
gi|433672674|gb|AGB36866.1| endonuclease III [Natronococcus occultus SP4]
Length = 227
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E E E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFEKYDGPEEYAAVDEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEEER-PEAIEQELMEIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ +C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRAVCTARNPDCSDCVLADICPSEKGD 216
>gi|253576460|ref|ZP_04853789.1| endonuclease III [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844097|gb|EES72116.1| endonuclease III [Paenibacillus sp. oral taxon 786 str. D14]
Length = 225
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 36/228 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D + L + T E+ + + L + I +G +++KAKHI
Sbjct: 30 FELTIAVLLSAQCTDATVNKVTADLFKKYKTPEDYVSVPLEELEQDIRKIGLYRSKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + Y ++P E L +LPGVG K A++ +++A+G+
Sbjct: 90 QSLCRILLERYGGEVPREHEKLVELPGVGRKTANVVVSNAFGV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + K+L +P+ W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGLAGWNDSVLEVEKKLMKRVPKEEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
+ +H L+ FG+ CK+Q P C+ C D+C +GKK + + PKK
Sbjct: 174 TLTHHRLIFFGRYHCKAQAPKCDVCPLLDVCREGKKRMKTPQNRKPKK 221
>gi|407461561|ref|YP_006772878.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045183|gb|AFS79936.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus koreensis AR1]
Length = 215
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++TKDE + L + + N + K+I P+GF+ K+K I
Sbjct: 34 FSILIGTILSARTKDESTTKVVKILFSKYKNPKQLANAKLKDVEKIIKPIGFYHVKSKRI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I+ Y +P +E L +LPGVG K A+ + +A+
Sbjct: 94 IEVAKIIDSKYKGKVPEDLETLVELPGVGRKTANCVLVYAF------------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK P + VD+HVHRIS+R+G K PE+T +EL + + W
Sbjct: 135 ---------------EK--PAIPVDIHVHRISNRIGLVDT-KNPEETEQELMKKIDKKFW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N V +GQ ICK P C+ C K C
Sbjct: 177 IDINDTFVMYGQNICKPISPMCDVCKIKRNC 207
>gi|448713761|ref|ZP_21702046.1| endonuclease III [Halobiforma nitratireducens JCM 10879]
gi|445789169|gb|EMA39860.1| endonuclease III [Halobiforma nitratireducens JCM 10879]
Length = 227
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E +D L + + + ++ KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNKETEHLFEKYDGPEEYAAAPQDELAEDLDSITYYNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK A + + + ++ ++P+T++ L L GVG K A++ + H +V GI
Sbjct: 95 IKSACEAIVEEHDGEVPDTMDELTDLSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ K PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-KRPERIEEELMEIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ +C ++ P C C+ D+CP K
Sbjct: 179 WQQFTHLCIDHGRAVCTARNPDCSDCVLADICPSEK 214
>gi|256545229|ref|ZP_05472594.1| endonuclease III [Anaerococcus vaginalis ATCC 51170]
gi|256399056|gb|EEU12668.1| endonuclease III [Anaerococcus vaginalis ATCC 51170]
Length = 215
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q D + + + T E+ N + I G +K KAK+I
Sbjct: 35 FELLIATILSAQCTDVRVNKVTSNMFKFANTPEDFSNMDIKEIESYIKTCGLYKNKAKNI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K AS +L + ++ +P+ ++ L KLPGVG K A++ M++A+GI
Sbjct: 95 KNASIMLIREFDGIVPDNMKDLTKLPGVGRKTANVVMSNAFGI----------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HV R+S+R+G K +T K+L LP+ W
Sbjct: 138 -------------------DAIAVDTHVQRVSNRIGLAAS-KDVLNTEKDLRKNLPKEKW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
S+++H ++ G++ICK++ P CE C KDLC K+
Sbjct: 178 SKLHHQIIAHGRKICKARNPLCEECDLKDLCEDYKE 213
>gi|448304976|ref|ZP_21494912.1| endonuclease III [Natronorubrum sulfidifaciens JCM 14089]
gi|445590357|gb|ELY44578.1| endonuclease III [Natronorubrum sulfidifaciens JCM 14089]
Length = 227
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E E+ S++ L + + + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKETKHLFEKYDGPEDYATVSQEELAEDLNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + ++++ ++P+T++ L L GVG K A++ + HA +V GI
Sbjct: 95 IRSACTTILEDHDGEVPDTMDELTALSGVGRKTANVVLQHAHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQDLMGIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ ++CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCADCVLAEICPSAKGD 216
>gi|291280018|ref|YP_003496853.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754720|dbj|BAI81097.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 212
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q DE + L + E+ N + + + I P GF++ KAK+I
Sbjct: 32 FQLLIATILSAQCTDERVNKVTATLFKKYKNFEDFKNADLEEIMEDIRPTGFFRNKAKNI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S+++ + Y IP I L KLPG+G K A++ + + + I
Sbjct: 92 KKLSEVILEKYEGVIPVDINELVKLPGIGRKTANVLLGNCFNI----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG T P+ ++L +P+ W
Sbjct: 135 -------------------PGIVVDTHVKRISQRLGLTDN-DNPDKIEQDLMEVIPKEKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
++ +H ++ FG++IC +++P C+ C +D+C E
Sbjct: 175 TKWSHQVIDFGRKICTAKKPKCDICEMRDVCKFANSE 211
>gi|289582883|ref|YP_003481349.1| endonuclease III [Natrialba magadii ATCC 43099]
gi|448283654|ref|ZP_21474926.1| endonuclease III [Natrialba magadii ATCC 43099]
gi|289532436|gb|ADD06787.1| endonuclease III [Natrialba magadii ATCC 43099]
gi|445573254|gb|ELY27777.1| endonuclease III [Natrialba magadii ATCC 43099]
Length = 227
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNTETKHLFEKYDGPEDYANVPEEELAEDLSSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + +++ + ++ ++P+T+ L +L GVG K A++ + H +V GI
Sbjct: 95 IKDSCEMILEEHDGEVPDTMSELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQELMDLVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCSDCVLADICPSEKGD 216
>gi|359459568|ref|ZP_09248131.1| endonuclease III [Acaryochloris sp. CCMEE 5410]
Length = 223
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L E D L LI GF++ KAKHI+
Sbjct: 36 QLLVATILSAQCTDERVNQVTPALFEAYPDALAFAEADRDALETLIRSTGFYRNKAKHIQ 95
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + ++++ +PN ++LL LPGV K A++ + H +GI G+
Sbjct: 96 GACQKIVRDFDGQVPNQMDLLLTLPGVARKTANVVLAHGYGINMGVT------------- 142
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S+RLG T + P ++L LP+ W
Sbjct: 143 ----------------------VDTHVKRLSNRLGLTH-HQDPVKIEQDLMKLLPQEDWE 179
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
+ L+ G+ +C +++P+C+ C DLCP + R SPKK
Sbjct: 180 NWSIRLIYHGRAVCSARKPTCDRCALNDLCPSAGQVTPAR---SPKK 223
>gi|323702821|ref|ZP_08114480.1| endonuclease III [Desulfotomaculum nigrificans DSM 574]
gi|333923896|ref|YP_004497476.1| endonuclease III [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532209|gb|EGB22089.1| endonuclease III [Desulfotomaculum nigrificans DSM 574]
gi|333749457|gb|AEF94564.1| endonuclease III [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 223
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 37/220 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++++LS+Q+ D + +L + T E+ + + L + I G ++ K+K I
Sbjct: 39 FELMVAVILSAQSTDAQVNKITAKLFKKYRTPEDFARLTPEQLAEDIKGCGLFRNKSKFI 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS IL Y +P E L KLPGVG K A++ + A+G T
Sbjct: 99 VEASKILVDKYGGKVPENRETLEKLPGVGRKTANVILGVAFGHHT--------------- 143
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHR++ RLG ++ KTPE T ++L + P LW
Sbjct: 144 ---------------------FPVDTHVHRVARRLGLSQG-KTPEQTEQDLCALFPPELW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAE 367
+H ++ G+++C ++ P C C K+LCP K+ E
Sbjct: 182 QRAHHQIIYHGRRVCDARNPRCWECCLKELCPTAGKQKGE 221
>gi|410670967|ref|YP_006923338.1| endonuclease III [Methanolobus psychrophilus R15]
gi|409170095|gb|AFV23970.1| endonuclease III [Methanolobus psychrophilus R15]
Length = 219
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
+L++ +LS+Q D + L + T+E+ GK I GF+ KAKHI
Sbjct: 42 LLVATILSAQCTDRQVNVVTQSLFRNYHTVEDYAAADVREFGKEIYSTGFYHQKAKHIIT 101
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
++ I+ +N +P+T+E L KLPGVG K A++ ++ A+G + GI
Sbjct: 102 SAQIMLSEFNGQVPDTMEGLLKLPGVGRKTANIVLSRAFGRIEGIA-------------- 147
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VD HV R+S RLG+T+ + PE ++L +
Sbjct: 148 ---------------------VDTHVKRLSRRLGFTR-HEDPEKIERDLMAIAKREELEA 185
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
++ L+ G+ +C +++P CE C+ LCP +
Sbjct: 186 LSMTLILHGRSVCVARKPKCEVCVVNRLCPSSR 218
>gi|339444803|ref|YP_004710807.1| putative EndoIII protein [Eggerthella sp. YY7918]
gi|338904555|dbj|BAK44406.1| predicted EndoIII protein [Eggerthella sp. YY7918]
Length = 220
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 36/214 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+QT D+ + L E T ++ + +I +GF+ TKA ++
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWERYPTPADLAAADVHDVENIIRTIGFYHTKASNV 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ +Y +IP I+ L KLPGVG K A++ +N A+GIV GI
Sbjct: 98 IKCAQMVVADYAGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIA------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWLPESL 326
VD HV RI+HRL + TP T L P
Sbjct: 146 -----------------------VDTHVFRIAHRLKFAGPSSDTPAKTETALLKLYPREY 182
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W +NH V FG++ C ++ P C C DLCP
Sbjct: 183 WGPINHQWVLFGRETCTARNPKCAECFLCDLCPS 216
>gi|269217530|ref|ZP_06161384.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212465|gb|EEZ78805.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
Length = 190
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + RL E E + L ++ P+GF++ KA
Sbjct: 7 FELLVATVLSAQTTDARVNTVTPRLFEAYPGPEALAGADRLELEDILHPLGFYRAKAASC 66
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L N+ ++P T+E L KLPGVG K A++ + +A+G+
Sbjct: 67 IGLAASLCANHGGEVPRTLEELVKLPGVGRKTANVVLGNAFGV----------------- 109
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++ R WT+ + P ++ +PES W
Sbjct: 110 -------------------PGITVDTHVGRLARRWAWTRS-EDPVKVEADIARLIPESEW 149
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++ H ++ G+Q+C++++P+C C D+CP
Sbjct: 150 TQACHRIIFHGRQVCRARKPACGACALADVCPS 182
>gi|239827461|ref|YP_002950085.1| endonuclease III [Geobacillus sp. WCH70]
gi|239807754|gb|ACS24819.1| endonuclease III [Geobacillus sp. WCH70]
Length = 223
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + L E T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKHLFEKYKTPEDYVSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCAILMEKYNGEVPKDRDELMKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWDASVLEVEETLMKKIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P C C DLC +GKK +
Sbjct: 175 SITHHRMIFFGRYHCKAQSPQCHVCPLLDLCREGKKRM 212
>gi|427405882|ref|ZP_18896087.1| endonuclease III [Selenomonas sp. F0473]
gi|425708723|gb|EKU71762.1| endonuclease III [Selenomonas sp. F0473]
Length = 209
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + RL T I + L I GF++ KAKHI
Sbjct: 32 FELLVAVILSAQCTDARVNIVTSRLFPRANTPAAIAGLGQAQLETAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L KLPGVG K A++ M+ A+
Sbjct: 92 LETCDILLREYGGEVPADFEALQKLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+RL V KTP + K L+ +P W
Sbjct: 133 -----------------HTPAIAVDTHVFRVSNRLHLA-VGKTPLEVEKGLQKAIPREDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
S+ +H L+ G++ICK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRRICKARKPLCAECPLAPVCPSA 208
>gi|448355817|ref|ZP_21544566.1| endonuclease III [Natrialba hulunbeirensis JCM 10989]
gi|445634525|gb|ELY87704.1| endonuclease III [Natrialba hulunbeirensis JCM 10989]
Length = 227
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E N E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEKYDGPEEYANAPEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + +I+ + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKDSCEIILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +P+
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQELMELVPDGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ C ++ P C C+ D+CP K
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCSDCVLADICPSEK 214
>gi|336255233|ref|YP_004598340.1| endonuclease III [Halopiger xanaduensis SH-6]
gi|335339222|gb|AEH38461.1| endonuclease III [Halopiger xanaduensis SH-6]
Length = 227
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNKETEHLFEKYDGPEDYANVPEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKNSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L + +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEEER-PEAIEQDLMTIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ C ++ P C C+ D+CP K
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCADCVLADICPSAK 214
>gi|126178987|ref|YP_001046952.1| endonuclease III [Methanoculleus marisnigri JR1]
gi|125861781|gb|ABN56970.1| DNA-(apurinic or apyrimidinic site) lyase [Methanoculleus
marisnigri JR1]
Length = 218
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ LI +LS+QT D +A L T E + + + LI +GF KA++I
Sbjct: 33 FETLILTILSAQTTDRAVNAVRDDLFSRYPTPEALARAEPEEVEPLIRTIGFHHAKARYI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ L + ++P T+E L LPGVG K A++ ++HA+ I GI
Sbjct: 93 VGAARKLVAEFGGEVPRTMEELQTLPGVGRKTANIVLSHAFDINVGIA------------ 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG+T P+ ++L + PE +W
Sbjct: 141 -----------------------VDTHVRRVSKRLGFTDS-TNPDIIERDLVALFPEEVW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N+LL+ G+ +C ++ P E C+ LC
Sbjct: 177 RDINYLLIRHGRAVCTAKNPKHEVCVVAGLC 207
>gi|385809949|ref|YP_005846345.1| type III endonuclease [Ignavibacterium album JCM 16511]
gi|383801997|gb|AFH49077.1| Putative type III endonuclease [Ignavibacterium album JCM 16511]
Length = 223
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 39/216 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+Q D+ VN K++ + +++ N S++ L + I GF+K KAK
Sbjct: 40 FQLLIATILSAQCTDQRVNFVTKDLFKKYK-SPKDLLNVSDEELERDIYSTGFYKQKAKS 98
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK L + ++ +P + L KLPGVG K A + +A+GI
Sbjct: 99 IKACCKELVEKFDGKVPADFDELVKLPGVGRKTASVVAGNAFGI---------------- 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+ LG+ P+ L+ LP+
Sbjct: 143 --------------------PAIAVDTHVKRLSNLLGFADT-DNPDKIEMRLKELLPKDY 181
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W +HLL G+ IC ++RP CE C+ CP K
Sbjct: 182 WILSSHLLATHGRNICIARRPKCEQCVIAKYCPSNK 217
>gi|453054497|gb|EMF01949.1| endonuclease III [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + L E T E++ + L +LI P GF++ KA+ +
Sbjct: 183 FQLLVATVLSAQTTDLRVNQTTPALFEAYPTPEDMAAADPERLEQLIRPTGFFRAKARSL 242
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ ++ ++P ++ L +LPGVG K A++ + +A+G
Sbjct: 243 LGLSAALRDDFGGEVPGRLQDLVRLPGVGRKTANVVLGNAFG------------------ 284
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD H R+ R WT PE E+ + P+S W
Sbjct: 285 ------------------VPGITVDTHFQRLVRRWRWT-AETDPEKIEAEVCALFPKSDW 325
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ ++H ++ G++IC S++P+C C LCP
Sbjct: 326 TMLSHRVIFHGRRICHSRKPACGACPIAPLCP 357
>gi|289548031|ref|YP_003473019.1| endonuclease III [Thermocrinis albus DSM 14484]
gi|289181648|gb|ADC88892.1| endonuclease III [Thermocrinis albus DSM 14484]
Length = 205
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+QT D + +L E T +++ + + + I V +++ KAK +
Sbjct: 27 FQLLVAVILSAQTTDAKVNQITPKLFERFPTPKDLAEAPLEEIEEYIRSVNYYRNKAKFL 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K AS IL + Y ++P TI+ L LPG+G K A + + +A+GI GI
Sbjct: 87 KEASRILVEKYGGEVPKTIDELVALPGIGRKSASMILYNAYGINEGIA------------ 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T P+ K+L P+ W
Sbjct: 135 -----------------------VDTHVARVSQRLGLTS-HTDPQKIEKDLMQITPKEDW 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
++++LL+ G+ +C ++ P C+ +D+CP
Sbjct: 171 GKLSNLLILLGRYVCTAKNPQHHKCVLRDICPSA 204
>gi|448308692|ref|ZP_21498567.1| endonuclease III [Natronorubrum bangense JCM 10635]
gi|445592972|gb|ELY47151.1| endonuclease III [Natronorubrum bangense JCM 10635]
Length = 227
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E E S++ L + + + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKETKHLFEKYDGPEAYAAVSQEELAEDLNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T++ L +L GVG K A++ + HA +V GI
Sbjct: 95 IRSACTTIIEEHDGEVPDTMDELTELSGVGRKTANVVLQHAHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTNE-EYPEPIEQDLMGIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCADCVLADICPSAKGD 216
>gi|251770935|gb|EES51520.1| Endonuclease III/Nth [Leptospirillum ferrodiazotrophum]
Length = 228
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+QT D + L T + S L ++ P GF++ KA+H+
Sbjct: 37 FELLVATVLSAQTTDLTVNRVTPELFARFPTPAALAEASLSELETILRPTGFFRRKAQHV 96
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L Y +P T+E L LPGVG K A + + H +
Sbjct: 97 KELAQALATRYQGVVPETMEELVTLPGVGRKTASVVLFHGF------------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
SR P + VD HV R+S RLG T+ PE ++L +PE W
Sbjct: 138 ----SR-------------PAIFVDTHVGRVSKRLGLTES-DDPERVERDLSELIPEKDW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
L+ G+++C ++RP C+TC DLCP
Sbjct: 180 GIAASRLLLHGRRVCLARRPLCKTCPCTDLCP 211
>gi|119510131|ref|ZP_01629270.1| Endonuclease III/Nth [Nodularia spumigena CCY9414]
gi|119465192|gb|EAW46090.1| Endonuclease III/Nth [Nodularia spumigena CCY9414]
Length = 232
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 44/221 (19%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V A R + ++ N + L L+ GF++ KA
Sbjct: 46 QLLVATILSAQCTDERVNKVTPALFARFPDAA----SLANADLEELENLVRSTGFYRNKA 101
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I+ A + +++ +PN +E L +LPGV K ++ + HA+GI G+
Sbjct: 102 KNIQGACQKIVSEFDSVVPNQMEQLLQLPGVARKTGNVVLAHAYGINAGV---------- 151
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R+S RLG TK F P K+L LP+
Sbjct: 152 -------------------------TVDTHVKRLSQRLGLTK-FPDPIRIEKDLIKLLPQ 185
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
W + L+ G+ +CK++ P CE C DLCP K L
Sbjct: 186 PDWENWSIRLIYHGRAVCKARSPLCEACELSDLCPSAGKTL 226
>gi|442320612|ref|YP_007360633.1| endonuclease III [Myxococcus stipitatus DSM 14675]
gi|441488254|gb|AGC44949.1| endonuclease III [Myxococcus stipitatus DSM 14675]
Length = 210
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L++ +L++Q DE + + + I + L + + P GF+K K K +
Sbjct: 31 YELLVATILAAQCTDERVNKVTAVVFPKYPGPQAIADADTAELEEDLKPTGFFKQKTKTV 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S L ++N ++P TIE L KLPGV K A++ +N A+ I +G+
Sbjct: 91 QAMSRALLADFNGEVPRTIEELVKLPGVARKTANVVLNTAFDIASGV------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG TK K PE ++L +P+ W
Sbjct: 138 ----------------------IVDTHVARVSQRLGLTKHDK-PEAIEQDLMKLVPQDAW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ V G+ C +++P C+ CL KD+CP+
Sbjct: 175 TFFGPATVLHGRYTCVAKKPKCDECLVKDICPR 207
>gi|254500247|ref|ZP_05112398.1| endonuclease III [Labrenzia alexandrii DFL-11]
gi|222436318|gb|EEE42997.1| endonuclease III [Labrenzia alexandrii DFL-11]
Length = 273
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 51/264 (19%)
Query: 101 KKTKWEPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQT 160
K++++ A E+ R H D P D+ + Y +L++++LS+Q
Sbjct: 37 KRSRYTKAETYEIFR-----RFHADNPEPEGELDY---------INAYTLLVAVLLSAQA 82
Query: 161 KDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNN 220
D + A L + T E + ED + + I +G +KTKAK++ + S+ L +++
Sbjct: 83 TDIGVNRATKHLFQIADTPEKMVTLGEDKVREKIRTIGLFKTKAKNVILMSEQLIRDHGG 142
Query: 221 DIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVR 280
++P E L KLPGVG K A++ +N +G
Sbjct: 143 EVPEDREALEKLPGVGRKTANVVLNIFFG------------------------------- 171
Query: 281 KCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQ 340
P + VD H+ R+ +R+G KTP D K +E +P+ +H L+ G+
Sbjct: 172 -----HPTIAVDTHLFRLGNRIGIAP-GKTPLDVEKSMEKAVPKEFSLHAHHWLILHGRY 225
Query: 341 ICKSQRPSCETCLNKDLCPQGKKE 364
ICK+++P C+ C+ DLC +KE
Sbjct: 226 ICKARKPECKRCVIYDLCKSPEKE 249
>gi|350566513|ref|ZP_08935175.1| endonuclease III [Peptoniphilus indolicus ATCC 29427]
gi|348662696|gb|EGY79348.1| endonuclease III [Peptoniphilus indolicus ATCC 29427]
Length = 216
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q D +A L + T E + + + I P GF+ KAK+I
Sbjct: 34 FELLIATILSAQCTDVRVNAVTEELFKVANTPEQFVEMGLEEIKRWIKPCGFYNNKAKNI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS++L YN+++PN IE L +LPGVG K A++ ++ +G
Sbjct: 94 LSASEVLISEYNSEVPNIIEELMQLPGVGRKTANVVASNCFG------------------ 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S+R+G+ K E T L+ + +S W
Sbjct: 136 ------------------VPAIAVDTHVFRLSNRIGFVNE-KDVEKTELALQKKIDKSRW 176
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ +H L+ G+++CK+++P CE C D C
Sbjct: 177 TLAHHTLIFHGRRVCKARKPLCENCNIIDYC 207
>gi|311030330|ref|ZP_07708420.1| endonuclease III [Bacillus sp. m3-13]
Length = 217
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 36/222 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L E E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFEKYQKPEDYLQVTLEELQQDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + YN +P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 RSLCQLLLEEYNGQVPKERDELVKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG K + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICKWKDSVLEVEKTLMRKIPKEKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERV 369
S+ +H L+ FG+ CK+Q P CE+C ++C +GKK + ++V
Sbjct: 175 SDTHHRLIFFGRYHCKAQNPQCESCPLLEMCREGKKRMKKKV 216
>gi|157826446|ref|YP_001495510.1| endonuclease III [Rickettsia bellii OSU 85-389]
gi|157801750|gb|ABV78473.1| Endonuclease III [Rickettsia bellii OSU 85-389]
Length = 213
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 37/215 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L E T E I E+ L K I +G + +KAK++
Sbjct: 30 FTLLVAVILSAQATDVSVNLATKSLFEIYDTPEKILGLGEEGLKKYIKSIGLFNSKAKNV 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL NY++ +PN E L KLPGVG K A++ +N +G
Sbjct: 90 IALCQILISNYDSKVPNNFEELVKLPGVGRKTANVVLNCLFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R++ R+G K TPE KEL +
Sbjct: 132 ------------------LPTMAVDTHVFRVAKRIGLAK-GNTPEAVEKELLQIIDGKWL 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
S +H L+ G+ ICK+++P CE C K+ C K
Sbjct: 173 SHAHHWLILHGRYICKARKPDCEICPIKEYCEYYK 207
>gi|299140539|ref|ZP_07033677.1| endonuclease III [Prevotella oris C735]
gi|298577505|gb|EFI49373.1| endonuclease III [Prevotella oris C735]
Length = 229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++ +LS+Q D+ + L H T E + + + +LI V + +KA H+
Sbjct: 31 FQLIVATLLSAQCTDKRINMITPELYRHYPTAEAMAQADWEDIFQLIKSVSYPNSKAHHL 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + +N ++P+ + L +LPGVG K A++ + W GK
Sbjct: 91 SEMAKILVERFNGEVPDNTDDLTQLPGVGRKTANV-VQAVW-----FGK----------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
P L VD HV+R+SHRLG + TP EL ++P++
Sbjct: 134 -------------------PTLAVDTHVYRVSHRLGLVPETANTPLKVELELMKYIPKAD 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
+H L+ G+ ICKSQRP C+ C CP G K L E+ +P +
Sbjct: 175 VGNAHHWLLLHGRYICKSQRPQCQDCPFSTFCPTGVKILKEKQASAPSE 223
>gi|398336976|ref|ZP_10521681.1| endonuclease III-like protein [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 38/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y + I+++LS+Q DE + L + T+E+ N + +LI GF+ KAK I
Sbjct: 126 YELAIAVILSAQCTDERVNQVTPELFKTFSTLESFANADLKEIERLIFSTGFYHNKAKSI 185
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + L ++ IPNTI L LPG G K A++ ++ G+V GI
Sbjct: 186 QGFARKLLNDFGGKIPNTIAELTSLPGFGRKTANVVLSEVHGLVEGI------------- 232
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT-PEDTRKELESWLPESL 326
VD HV+RI+ LG TK KT P K+L LPE
Sbjct: 233 ----------------------VVDTHVNRIAKVLGLTK--KTDPVQVEKDLMEILPEKY 268
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 269 WRDISLYLIFLGRKSCKAHRRFCEECILKKDCPS 302
>gi|393796716|ref|ZP_10380080.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 175
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 156 LSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILK 215
+S++TKDE A+ L + + + + K+I +GF+ K+K I + I+
Sbjct: 1 MSARTKDETTTKAVKVLFSKYKNAKELASAKTKDVEKIIKSIGFYHVKSKRIIEVAKIIN 60
Query: 216 KNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSE 275
Y +P+ +E L +LPGVG K A+ + +A+ D+
Sbjct: 61 SKYKGKVPDNLEKLVELPGVGRKTANCVLVYAF--------DK----------------- 95
Query: 276 LICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLV 335
P + VD+HVHRIS+RLG KTPE+T +EL +P+ W ++N V
Sbjct: 96 -----------PAIPVDIHVHRISNRLGLVNT-KTPEETEQELMRIIPKKFWIDINDTFV 143
Query: 336 GFGQQICKSQRPSCETCLNKDLC 358
+GQ ICK P C C K+ C
Sbjct: 144 MYGQNICKPISPMCNVCKIKNNC 166
>gi|448501578|ref|ZP_21612280.1| endonuclease III [Halorubrum coriense DSM 10284]
gi|445695009|gb|ELZ47122.1| endonuclease III [Halorubrum coriense DSM 10284]
Length = 227
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 36/220 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E + ++ + + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNEVCADLFETYETPEEYADAPQEEMAEEINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEEHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIEQDLLDVVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
W + HL++ G+ C + P C+ C DLCP K + A
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCDDCALADLCPSEKGDAA 218
>gi|288818057|ref|YP_003432405.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|384128821|ref|YP_005511434.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288787457|dbj|BAI69204.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308751658|gb|ADO45141.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
Length = 209
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+++L++QT D +VNH K++ T E+ + L + I + +++ KAK+
Sbjct: 30 FELLIAVILAAQTTDAKVNHVTERLFKKYK-TPEDYLRVPLEELQEDISSINYYRNKAKY 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK A ++ ++Y ++P +IE L +LPGVG K A++ + +A+GI GI
Sbjct: 89 IKGACKMIIEDYGGEVPKSIEELTRLPGVGRKTANMILYNAFGINEGIA----------- 137
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD H R+S RLG T+ K P+ +EL P+
Sbjct: 138 ------------------------VDTHTARVSKRLGLTEEEK-PDKIEQELMQITPKEE 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W ++++LL+ G+ IC ++ P + C+ DLCP
Sbjct: 173 WGKLSNLLILHGRYICTAKNPKHKECVLYDLCP 205
>gi|6939619|dbj|BAA90651.1| End3 [Paenibacillus polymyxa]
Length = 224
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + + E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKSPEDYLAVPLEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y +IP+ + L KLPGVG K A++ ++ A+
Sbjct: 90 HNLCRILIDQYGGEIPSEHDQLVKLPGVGRKTANVVVSTAF------------------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 131 -----------------DVPAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
S +H L+ FG+ CK+Q P C+ C D+C +GKK + + + KKR++
Sbjct: 174 SVTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSLIRKDKKRRA 224
>gi|345303360|ref|YP_004825262.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
gi|345112593|gb|AEN73425.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
Length = 217
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS+QT D+ + L T E + + + L L+ P+G+++ KA+ I
Sbjct: 34 FELLIVTVLSAQTTDKKVNEVSPELFRRYPTPEALAQANPEELEPLLRPLGYFRQKARTI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + + ++P ++E L LPGVG K A + + A+GI GI
Sbjct: 94 VNLACQLVERHGGEVPRSMEELTALPGVGRKTAAIVLGTAFGIREGIA------------ 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T KTP+ ++L + +P W
Sbjct: 142 -----------------------VDTHVSRVSQRLGLTS-HKTPDKIEQDLMALVPREDW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ H LV G+ +C ++RP C C+ DLCP+
Sbjct: 178 TWFGHALVLHGRYVCLARRPRCSQCVLADLCPR 210
>gi|347542986|ref|YP_004857623.1| endonuclease III [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986022|dbj|BAK81697.1| endonuclease III [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 209
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 39/217 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+QT D+ VN E+ +E+ N E+ L I +G ++TK+K+
Sbjct: 29 FQLLIATVLSAQTTDKKVNEVTNSLFSEYP-KLEDFLNLDEEKLKDKIKCIGLYRTKSKN 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I ILK+ +N ++P T + L LPGVG K A++ +++ +G
Sbjct: 88 IINLCKILKEEFNGEVPKTRDELITLPGVGRKTANVVISNCFG----------------- 130
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+ VDVHV R+S+R+G KTPE T EL + ESL
Sbjct: 131 -------------------VQAFAVDVHVFRVSNRIGIANS-KTPEQTELELMKNIDESL 170
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
W+ +H ++ G++ C S++P+C C K+ C K+
Sbjct: 171 WTICHHTIIFHGRRCCTSRKPNCGECKIKEYCKYYKQ 207
>gi|448358112|ref|ZP_21546797.1| endonuclease III [Natrialba chahannaoensis JCM 10990]
gi|445646683|gb|ELY99667.1| endonuclease III [Natrialba chahannaoensis JCM 10990]
Length = 227
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E + N +D L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEKYDGPADYANAPQDELAEDLSSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + +++ + ++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKDSCEMILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPEPIEQELMDLVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCSDCVLADICPSEKGD 216
>gi|452850917|ref|YP_007492601.1| Endonuclease III [Desulfovibrio piezophilus]
gi|451894571|emb|CCH47450.1| Endonuclease III [Desulfovibrio piezophilus]
Length = 211
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ LS+Q DE + E I++ + ++ GF++ KAK+I
Sbjct: 31 WELLVATALSAQCTDERVNMVTPVFFEKWPDIQDAAEADISEIEAVVRSTGFFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ A++ + YN ++P ++ L L GV K A + +++A+GI GI
Sbjct: 91 RAAANRIMTEYNGEVPKSMAELITLGGVARKTASIVLSNAFGINEGIA------------ 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT-PEDTRKELESWLPESL 326
VD HV R++ R+G T+ KT P K+L P
Sbjct: 139 -----------------------VDTHVKRLAFRMGLTQ--KTDPIQIEKDLMPLFPREQ 173
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W E+NH LV +G+Q+C +++P C+ C D+CP+
Sbjct: 174 WGEINHFLVFYGRQVCPARKPKCDECELNDICPK 207
>gi|414155043|ref|ZP_11411359.1| putative endonuclease III [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411453356|emb|CCO09263.1| putative endonuclease III [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 233
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+QT D + +L + T + + + L I G ++ K+K I
Sbjct: 46 FELLVAVILSAQTTDAQVNKITRQLFKKFATPQEFARLTPEELAAYIKGCGLYRNKSKAI 105
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS I+ + Y +P + L KLPGVG K A++ + A+G
Sbjct: 106 VAASRIIAEQYQGQVPARRDELEKLPGVGRKTANVVLGVAFG------------------ 147
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ +P VD HVHR++ RLG KTPE T +EL + +P LW
Sbjct: 148 ---------------QHTLP---VDTHVHRVARRLGLAS-GKTPELTEQELCAVIPPPLW 188
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+H ++ G+++C ++RP C C DLCP+
Sbjct: 189 QPTHHRIIQHGRKVCLARRPRCCRCFLSDLCPE 221
>gi|260891368|ref|ZP_05902631.1| endonuclease III [Leptotrichia hofstadii F0254]
gi|260858751|gb|EEX73251.1| endonuclease III [Leptotrichia hofstadii F0254]
Length = 219
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 36/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y ++++++LS+Q D + L + E+I +L K I GF+K KAK+I
Sbjct: 31 YQLMVAVILSAQCTDARVNIVTKELFKVVRKPEDIRKMDLGILEKYIKSTGFYKNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K+ ++++ + YN+ IP +E L +LPGVG K A++ + W I GI
Sbjct: 91 KLNAEMMLEKYNDVIPKDLEKLVELPGVGRKTANVVLGELWNIREGI------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S+R+G+ K PE +EL ++P+ W
Sbjct: 138 ----------------------VVDTHVKRLSNRIGFVKN-DNPEIIERELMKFVPKRDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H ++ G+ C +++P CE C +D C
Sbjct: 175 FVYSHYMILHGRDKCIARKPKCEICEIRDYC 205
>gi|222529457|ref|YP_002573339.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
bescii DSM 6725]
gi|222456304|gb|ACM60566.1| DNA-(apurinic or apyrimidinic site) lyase [Caldicellulosiruptor
bescii DSM 6725]
Length = 178
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 151 LISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMA 210
+I+ +L++Q+ DE + L + T+E+ + L I PVGF+K KAK IK
Sbjct: 1 MIATILAAQSTDERVNKITAELFKKYPTLESFAEANISELENDIKPVGFYKNKAKSIKET 60
Query: 211 SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQ 270
+ IL + YN +P TIE L KL GVG K A++ M + +G
Sbjct: 61 ARILVEKYNGTLPTTIEELVKLKGVGRKTANVIMANIYG--------------------- 99
Query: 271 ISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEV 330
IP + VD H R+S+RLG K EL+ + L++
Sbjct: 100 ---------------IPSIIVDTHCKRLSNRLGLVNS-KDATKIEFELKKIVEPQLYTIF 143
Query: 331 NHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
++L+V G+ +CK+ +P CE C KD+C K
Sbjct: 144 SNLMVYHGRAVCKAIKPRCEVCTIKDVCEYFK 175
>gi|224541854|ref|ZP_03682393.1| hypothetical protein CATMIT_01026 [Catenibacterium mitsuokai DSM
15897]
gi|224525204|gb|EEF94309.1| endonuclease III [Catenibacterium mitsuokai DSM 15897]
Length = 211
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 58/257 (22%)
Query: 113 VLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRL 172
+LN EM P +HS N+++ L+++MLS+QT DE + L
Sbjct: 9 ILNTFDEM-----FPNARCVLNHSNNLEL---------LVAVMLSAQTTDESVNKLTSHL 54
Query: 173 KEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKL 232
+ T+++ N S L + +G ++ KAK+IK + L+ +N +P + + L L
Sbjct: 55 FQKYKTVDDYANASLPELESDLHSIGLYRNKAKNIKAMAVALQARFNGVVPASHDALISL 114
Query: 233 PGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVD 292
PGVG K A++ M +G P + VD
Sbjct: 115 PGVGRKTANVVMAEGFGY------------------------------------PAIAVD 138
Query: 293 VHVHRISHRLGWTKVFKTPEDT----RKELESWLPESLWSEVNHLLVGFGQQICKSQRPS 348
HV RIS RLG+ K PEDT K+L +P++ W + +H ++ FG+ CK+ P
Sbjct: 139 THVERISKRLGFAK----PEDTVLTVEKKLMKTIPKNRWIKTHHQMIFFGRYHCKAMSPH 194
Query: 349 CETCLNKDLCPQGKKEL 365
C+ C D+C + K+L
Sbjct: 195 CKECPLVDICKEKNKKL 211
>gi|315230941|ref|YP_004071377.1| endonuclease III [Thermococcus barophilus MP]
gi|315183969|gb|ADT84154.1| endonuclease III [Thermococcus barophilus MP]
Length = 236
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIP--VGFWKTKAK 205
+ LI ++S + +DEV L T+ + N + + KL+ VG WK K K
Sbjct: 45 FFTLIRCIISQRNRDEVTDRVSELLFNRYPTVHALANAKIEDVQKLLRENGVGLWKNKGK 104
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I S I+ + Y +P+ +E L KLPG+G K A++ + + +G
Sbjct: 105 WIVECSRIILEKYGGKVPDMLEELVKLPGIGRKCANIVLAYGFG---------------- 148
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
++ IP VD HV+RIS RLG PE + L+ +P+
Sbjct: 149 -----------------KQAIP---VDTHVNRISKRLGLAPPKAPPEKVEEYLKELIPKE 188
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA-ERVKKS 372
LW VNH +V G+ IC+ P C+ C K LCP K ++ E ++K+
Sbjct: 189 LWIYVNHAMVDHGKAICRPISPRCDECPLKTLCPYAKGFISDEEIRKT 236
>gi|357014322|ref|ZP_09079321.1| Nth [Paenibacillus elgii B69]
Length = 235
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q DE + L + E+ + L + I +G ++ KAK+I
Sbjct: 30 FELTIAVLLSAQCTDETVNKVTATLFQKYKRPEDYLAVPLEELEQDIRRIGLFRNKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P E L +LPGVG K A++ +++A+ +
Sbjct: 90 QALCAMLLDKYNGEVPREHEKLVELPGVGRKTANVVVSNAFDV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG V + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGLAGVNDSVLEVEKKLMKRVPREEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
++ +H L+ FG+ CK+Q P CE C DLC +GKK +
Sbjct: 174 TQTHHRLIFFGRYHCKAQNPKCEVCPLIDLCREGKKRM 211
>gi|333025404|ref|ZP_08453468.1| putative endonuclease III [Streptomyces sp. Tu6071]
gi|332745256|gb|EGJ75697.1| putative endonuclease III [Streptomyces sp. Tu6071]
Length = 343
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D VN ++ T E++ + L +LI P GF++ KA+
Sbjct: 125 FQLLVATVLSAQTTDLRVNQTTPALFAKYP-TPEDMAAAVPEELEELIRPTGFFRAKARS 183
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ S L+ +++ ++P T++ L KLPGVG K A + + +A+G
Sbjct: 184 LLGLSAALRDDFDGEVPATVDALVKLPGVGRKTAFVVLGNAFG----------------- 226
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD H R++ R WT + P ++ + S
Sbjct: 227 -------------------VPGITVDTHFGRLARRWKWTTS-EDPVKVESDVAAIFEPSE 266
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W+ ++H ++ G++IC S+RP+C C LCP
Sbjct: 267 WTMLSHRVIFHGRRICHSRRPACGACPVAPLCPS 300
>gi|281423216|ref|ZP_06254129.1| endonuclease III [Prevotella oris F0302]
gi|281402552|gb|EFB33383.1| endonuclease III [Prevotella oris F0302]
Length = 229
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++ +LS+Q D+ + L H T E + + + +LI V + +KA H+
Sbjct: 31 FQLIVATLLSAQCTDKRINMITPELYRHYPTAEAMAQADWEDIFQLIKSVSYPNSKAHHL 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + +N ++P+ + L +LPGVG K A++ + W GK
Sbjct: 91 SEMAKILVERFNGEVPDNTDDLTQLPGVGRKTANV-VQAVW-----FGK----------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWT-KVFKTPEDTRKELESWLPESL 326
P L VD HV+R+SHRLG + TP EL ++P++
Sbjct: 134 -------------------PTLAVDTHVYRVSHRLGLVPETANTPLKVELELMKYIPKAD 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKK 375
+H L+ G+ ICKSQ+P C+ C CP G K L E+ +P K
Sbjct: 175 VGNAHHWLLLHGRYICKSQKPQCQDCPFNTFCPTGVKILKEKQASAPSK 223
>gi|310642477|ref|YP_003947235.1| endonuclease iii [Paenibacillus polymyxa SC2]
gi|386041546|ref|YP_005960500.1| endonuclease III [Paenibacillus polymyxa M1]
gi|309247427|gb|ADO56994.1| Endonuclease III [Paenibacillus polymyxa SC2]
gi|343097584|emb|CCC85793.1| endonuclease III [Paenibacillus polymyxa M1]
Length = 224
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + + E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKSPEDYLAVPLEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y +IP+ + L KLPGVG K A++ ++ A+
Sbjct: 90 HNLCRILIDQYGGEIPSEHDQLVKLPGVGRKTANVVVSTAF------------------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 131 -----------------DVPAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
S +H L+ FG+ CK+Q P C+ C D+C +GKK + + + KKR++
Sbjct: 174 SVTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSLIRKDKKRRA 224
>gi|258510450|ref|YP_003183884.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477176|gb|ACV57495.1| endonuclease III [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 220
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q DE + RL E S D + + I VG +++K+KHI
Sbjct: 33 FELLVATILSAQCTDERVNMVTPRLFAKYRGPEGFAKASPDEVAEDIREVGLFRSKSKHI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL Y ++P + + L +LPGVG K A++ +++A+G+
Sbjct: 93 VETARILVDEYGGEVPKSRDRLMELPGVGRKTANVVVSNAYGV----------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P VD HV R+++R+G K P T +++ + LP LW
Sbjct: 136 -------------------PAFAVDTHVQRVTNRIGLAKS-NDPLKTEQQVCAKLPPELW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++ +H L+ G+++C +++P C C DLC
Sbjct: 176 TKAHHALILHGRRVCTARKPKCHICPVADLC 206
>gi|448480061|ref|ZP_21604455.1| endonuclease III [Halorubrum arcis JCM 13916]
gi|445822246|gb|EMA72016.1| endonuclease III [Halorubrum arcis JCM 13916]
Length = 227
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N S++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYHGPEDYANASQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAETHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIEQDLLEVVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCALADVCPSEKGD 216
>gi|448344745|ref|ZP_21533647.1| endonuclease III [Natrinema altunense JCM 12890]
gi|445636851|gb|ELY90008.1| endonuclease III [Natrinema altunense JCM 12890]
Length = 227
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ +D L + + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNQETEHLFEKYDGAEDYATAEQDELAADLNSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACESILEDHDGEVPDTMAELTDLSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + P+ ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPDRIEEDLMEIVPEDS 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W E HL + G+ C +Q P C C+ D CP K +
Sbjct: 179 WQEFTHLCIDHGRATCTAQNPDCGDCVLADRCPSAKGD 216
>gi|448446645|ref|ZP_21590867.1| endonuclease III [Halorubrum saccharovorum DSM 1137]
gi|445683789|gb|ELZ36179.1| endonuclease III [Halorubrum saccharovorum DSM 1137]
Length = 227
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNEVCSDLFETYETPEEYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEKHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PESIEQDLLEVVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCGDCVLADVCPSEKGD 216
>gi|218290429|ref|ZP_03494559.1| endonuclease III [Alicyclobacillus acidocaldarius LAA1]
gi|218239557|gb|EED06751.1| endonuclease III [Alicyclobacillus acidocaldarius LAA1]
Length = 220
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 37/224 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q DE + RL E S D + + I VG +++K+KHI
Sbjct: 33 FELLVATILSAQCTDERVNMVTPRLFAKYRGPEGFAKASPDEVAEDIREVGLFRSKSKHI 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL Y ++P + + L +LPGVG K A++ +++A+G+
Sbjct: 93 VETARILVDEYGGEVPKSRDRLMELPGVGRKTANVVVSNAYGV----------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P VD HV R+++R+G + P T +++ + LP LW
Sbjct: 136 -------------------PAFAVDTHVQRVTNRIGLAQS-NDPLKTEQQVCAKLPPELW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKK 371
++ +H L+ G+++C +++P C C DLC + + ++ ++
Sbjct: 176 TKAHHALILHGRRVCTARKPKCHICPVADLCQYARNQAEQKAEQ 219
>gi|67459583|ref|YP_247207.1| endonuclease III [Rickettsia felis URRWXCal2]
gi|75536019|sp|Q4UK93.1|END3_RICFE RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|67005116|gb|AAY62042.1| Endonuclease III [Rickettsia felis URRWXCal2]
Length = 213
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L+++MLS+Q D + A L E T E I ED L K I +G + +KAK+I
Sbjct: 30 FTLLVAVMLSAQATDISVNLATKSLFETYDTTEKILELGEDGLKKYIKSIGLFNSKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL NY + +PN + L KLPGVG K A++ +N +G
Sbjct: 90 IALCKILISNYQSSVPNDFKELIKLPGVGRKTANVVLNCLFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R++ R+G + +PE KEL + E
Sbjct: 132 ------------------MPTMAVDTHVFRVAKRIGLARG-NSPEIVEKELLQIINEKWL 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ +H L+ G+ ICK+++P C+ C K+ C
Sbjct: 173 THAHHWLILHGRYICKARKPDCDICPIKEYC 203
>gi|312110487|ref|YP_003988803.1| endonuclease III [Geobacillus sp. Y4.1MC1]
gi|336234949|ref|YP_004587565.1| endonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|423719504|ref|ZP_17693686.1| endonuclease III [Geobacillus thermoglucosidans TNO-09.020]
gi|311215588|gb|ADP74192.1| endonuclease III [Geobacillus sp. Y4.1MC1]
gi|335361804|gb|AEH47484.1| endonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|383367596|gb|EID44873.1| endonuclease III [Geobacillus thermoglucosidans TNO-09.020]
Length = 216
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T E+ + L + I +G ++ KAK+I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKRLFEKYKTPEDYVAVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + Y +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCAMLIEKYGGQVPQDRDELMKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWEDSVLEVEKTLMKKIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P C C DLC +GKK +
Sbjct: 175 SITHHRMIFFGRYHCKAQSPQCHVCPLLDLCREGKKRM 212
>gi|404496830|ref|YP_006720936.1| endonuclease III-like DNA glycosidase [Geobacter metallireducens
GS-15]
gi|418065220|ref|ZP_12702594.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter
metallireducens RCH3]
gi|78194435|gb|ABB32202.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter metallireducens GS-15]
gi|373562398|gb|EHP88609.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter
metallireducens RCH3]
Length = 218
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VL+S +LS +T+D A RL T + S D + + I PVGF++ KA I
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFGLADTPAKMLFLSSDAIEQAIYPVGFYRNKAAQI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
L Y+ +P+ ++ L GVG K A+L + +G +
Sbjct: 96 LDICRTLVDKYDGQVPDDLDELLTFRGVGRKTANLVLTLGFGKLA--------------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+CVD HVHRI +R G+T KTP +T L + LP+ W
Sbjct: 141 ---------------------ICVDTHVHRICNRWGYTST-KTPAETEFALRAKLPQKYW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+N LV FGQ C P C TC+ C
Sbjct: 179 PVINDYLVTFGQNQCTPVSPRCSTCVLVCFC 209
>gi|91206121|ref|YP_538476.1| endonuclease III [Rickettsia bellii RML369-C]
gi|91069665|gb|ABE05387.1| Endonuclease III [Rickettsia bellii RML369-C]
Length = 315
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L E T E I E+ L K I +G + +KAK++
Sbjct: 132 FTLLVAVILSAQATDVSVNLATKSLFEIYDTPEKILGLGEEGLKKYIKSIGLFNSKAKNV 191
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL NY++ +PN E L KLPGVG K A++ +N +G
Sbjct: 192 IALCQILISNYDSKVPNNFEELVKLPGVGRKTANVVLNCLFG------------------ 233
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R++ R+G K TPE KEL +
Sbjct: 234 ------------------LPTMAVDTHVFRVAKRIGLAKG-NTPEAVEKELLQIIDGKWL 274
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S +H L+ G+ ICK+++P CE C K+ C
Sbjct: 275 SHAHHWLILHGRYICKARKPDCEICPIKEYC 305
>gi|256828392|ref|YP_003157120.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
gi|256577568|gb|ACU88704.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
Length = 222
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D + +L T+E + + +I GF++ KAK++
Sbjct: 34 WELLVATILSAQCTDARVNMVTPKLFATWRTVEQMATADPAQIESVIRSTGFFRNKAKNL 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++ + ++ +P T+E + L GV K A++ +++A+G+ GI
Sbjct: 94 HASAVRIVTHFGGQVPRTMEEMLTLAGVARKTANVVLSNAYGVHAGIA------------ 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV RIS RLG T+ P+ ++L P+ W
Sbjct: 142 -----------------------VDTHVKRISFRLGLTRQ-TNPDKVEQDLLKLFPQESW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
VNH LV FG+++C +++P C+ C DLCP+
Sbjct: 178 GAVNHYLVLFGREVCAARKPLCDACELADLCPR 210
>gi|194016957|ref|ZP_03055570.1| endonuclease III [Bacillus pumilus ATCC 7061]
gi|194011563|gb|EDW21132.1| endonuclease III [Bacillus pumilus ATCC 7061]
Length = 220
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKTLFQKYKTPEDYLSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + Y+ ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLSKMLIEEYDGEVPKDRDELVKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +PE W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPEEDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+QRP CE+C D+C +G+K L
Sbjct: 175 SVTHHRLIFFGRYHCKAQRPQCESCPLLDMCREGQKRL 212
>gi|440494220|gb|ELQ76619.1| Endonuclease III [Trachipleistophora hominis]
Length = 201
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKE-------HGLTIENICNTSEDVLGKLIIP 196
E R++ VL+ L+LS QT+D+ + + L E G++ I S D L I
Sbjct: 11 EHRKFRVLMMLILSQQTRDKTTYTTIHNLNELLVRKYGEGISPYTISLLSLDELSSSIKN 70
Query: 197 VGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGK 256
++ KAK+IKM ++ N + + L KLPG+G K+A L + A GIG
Sbjct: 71 ANYYIKKAKNIKMIAEYF---VNRKMATEYDELVKLPGIGNKIAFLYLQIACNKTVGIG- 126
Query: 257 DESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRK 316
VD HVHRI +RLG KTPE+TR
Sbjct: 127 ----------------------------------VDTHVHRIFNRLGVVTT-KTPEETRI 151
Query: 317 ELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+LE + W ++N ++VGFGQ +C ++P C C+ C GKK
Sbjct: 152 QLEQIYDKEEWGQINKVMVGFGQTVCLPKKPKCNECVVNYCCKYGKK 198
>gi|23501077|ref|NP_697204.1| endonuclease III [Brucella suis 1330]
gi|161618154|ref|YP_001592041.1| endonuclease III [Brucella canis ATCC 23365]
gi|163842435|ref|YP_001626839.1| endonuclease III [Brucella suis ATCC 23445]
gi|260567197|ref|ZP_05837667.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261756055|ref|ZP_05999764.1| endonuclease III [Brucella suis bv. 3 str. 686]
gi|376279865|ref|YP_005153871.1| endonuclease III [Brucella suis VBI22]
gi|384223859|ref|YP_005615023.1| endonuclease III [Brucella suis 1330]
gi|23346945|gb|AAN29119.1| endonuclease III [Brucella suis 1330]
gi|161334965|gb|ABX61270.1| endonuclease III [Brucella canis ATCC 23365]
gi|163673158|gb|ABY37269.1| endonuclease III [Brucella suis ATCC 23445]
gi|260156715|gb|EEW91795.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261745808|gb|EEY33734.1| endonuclease III [Brucella suis bv. 3 str. 686]
gi|343382039|gb|AEM17531.1| endonuclease III [Brucella suis 1330]
gi|358257464|gb|AEU05199.1| endonuclease III [Brucella suis VBI22]
Length = 248
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNIILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|339630005|ref|YP_004721648.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfobacillus
acidophilus TPY]
gi|379009107|ref|YP_005258558.1| endonuclease III [Sulfobacillus acidophilus DSM 10332]
gi|339287794|gb|AEJ41905.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Sulfobacillus acidophilus TPY]
gi|361055369|gb|AEW06886.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Sulfobacillus acidophilus DSM 10332]
Length = 217
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ MLS+Q D + RL + + +LI G + TKA+++
Sbjct: 29 WQLLVATMLSAQCTDRRVNMITPRLFRRFPDAFALAEALLADVEELIRDCGLYHTKAQNL 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ + Y ++P + L LPGVG K A++ +++A+G+
Sbjct: 89 IRTARVIAETYRGEVPADRDALMALPGVGRKTANVVLSNAFGV----------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
L VD HV R+SHRLGW+ K P T ++L + +P++LW
Sbjct: 132 -------------------DALAVDTHVFRVSHRLGWSNA-KDPAGTEQQLMALIPQALW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
S+ +H L+ G+ CK+ RP C C DLCP ++
Sbjct: 172 SKAHHWLIYHGRYCCKAVRPLCHECPLADLCPSAER 207
>gi|334339915|ref|YP_004544895.1| endonuclease III [Desulfotomaculum ruminis DSM 2154]
gi|334091269|gb|AEG59609.1| endonuclease III [Desulfotomaculum ruminis DSM 2154]
Length = 224
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q+ D+ + +L + T + + D L I G ++ K+KH+
Sbjct: 40 FELLVAVILSAQSTDQQVNKITEKLFKKYRTPQEFALLTADQLANDIKGCGLFRNKSKHL 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + Y ++P E L LPGVG K A++ + +G T
Sbjct: 100 VETSRILVEQYGGEVPQDRESLMLLPGVGRKTANVVLGVVFGQAT--------------- 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHR++HRLG + K+PE T +L + +P W
Sbjct: 145 ---------------------FPVDTHVHRLAHRLGLSS-GKSPEQTELDLCALIPPEQW 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+H L+ G+++C +++P C C DLCP K+
Sbjct: 183 QRAHHQLIYHGRRVCDARKPKCPDCCVNDLCPSAKR 218
>gi|332982475|ref|YP_004463916.1| DNA-(apurinic or apyrimidinic site) lyase [Mahella australiensis
50-1 BON]
gi|332700153|gb|AEE97094.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Mahella australiensis 50-1 BON]
Length = 213
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q+ D+ + G+L T E+ L + I G ++TKA +I
Sbjct: 31 FELLIATILSAQSTDKQVNKVTGKLFGKYKTPEDFAALEPQTLEEEIKSCGLYRTKALNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + Y + +P+ + L KLPGVG K A++ +++A+G
Sbjct: 91 INMSKILVERYGSQVPSDPDELQKLPGVGRKTANVVVSNAFGR----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++HRLG K TP T KEL + +P LW
Sbjct: 134 -------------------PAIAVDTHVFRVTHRLGLAKS-STPLGTEKELMACIPRVLW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H + G+ +C++++P C+ C + C
Sbjct: 174 SQAHHWFIYHGRNVCRARQPKCDECRLRQYC 204
>gi|15789799|ref|NP_279623.1| endonuclease III [Halobacterium sp. NRC-1]
gi|169235518|ref|YP_001688718.1| DNA-(apurinic or apyrimidinic site) lyase endonuclease III
[Halobacterium salinarum R1]
gi|10580185|gb|AAG19103.1| endonuclease III [Halobacterium sp. NRC-1]
gi|167726584|emb|CAP13369.1| endonuclease III [Halobacterium salinarum R1]
Length = 227
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L++++LS+Q DE +A L + T+ + N E+ L + + ++ +KA +
Sbjct: 35 RMELLVAVILSAQCTDERVNAETEHLFDTYETVADYANADEEALAAELNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK A+ + ++++ +P+T+ L L GVG K A++ + H + GI
Sbjct: 95 IKSAAQSILEDHDGAVPDTMSDLTDLSGVGRKTANVVLQHGHDLTQGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ K PE +L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGITE-KKRPEAIETDLMPVVPEDH 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W H L+ G++ C ++ P C C+ D+CP K +
Sbjct: 179 WKNYTHWLIAHGRETCTARNPDCGACVLADICPSSKTD 216
>gi|148559865|ref|YP_001258197.1| endonuclease III [Brucella ovis ATCC 25840]
gi|225626703|ref|ZP_03784742.1| endonuclease III [Brucella ceti str. Cudo]
gi|148371122|gb|ABQ61101.1| endonuclease III [Brucella ovis ATCC 25840]
gi|225618360|gb|EEH15403.1| endonuclease III [Brucella ceti str. Cudo]
Length = 260
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 66 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 125
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 126 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 170
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 171 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 208
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 209 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 242
>gi|401565439|ref|ZP_10806277.1| endonuclease III [Selenomonas sp. FOBRC6]
gi|400187188|gb|EJO21384.1| endonuclease III [Selenomonas sp. FOBRC6]
Length = 209
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + RL T E I ++ L I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDVRVNIVTSRLFPRANTPEAIAALGQEQLEAAIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
DIL + Y ++P E L +LPGVG K A++ M+ A+
Sbjct: 92 LETCDILLQEYGGEVPADFEALQRLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++RL V KTP + K L+ +P W
Sbjct: 133 -----------------HAPAIAVDTHVFRVANRLRLA-VGKTPLEVEKGLQKAIPREDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
S+ +H L+ G+Q CK+++P C C +CP
Sbjct: 175 SDAHHWLILHGRQRCKARKPLCGECPLAPVCPSA 208
>gi|257125212|ref|YP_003163326.1| endonuclease III [Leptotrichia buccalis C-1013-b]
gi|257049151|gb|ACV38335.1| endonuclease III [Leptotrichia buccalis C-1013-b]
Length = 219
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y ++++++LS+Q D + L + +I +++ L K I GF+K KAK+I
Sbjct: 31 YQLMVAVILSAQCTDARVNIVTKELFKVVKEPADIRKMNQETLEKYIKSTGFYKNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K+ ++++ Y + IP +E L +LPGVG K A++ + W I GI
Sbjct: 91 KLNAEMMLDKYKDIIPKKLEELIELPGVGRKTANVVLGELWNIREGI------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S+R+G+ K PE +EL ++P+ W
Sbjct: 138 ----------------------VVDTHVKRLSNRIGFVKN-DNPEIIERELMKFIPKKYW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H L+ G+ C +++P CE C +D C ++ L
Sbjct: 175 FVYSHYLILHGRDKCIARKPKCEICEIRDYCKYNEENL 212
>gi|448473406|ref|ZP_21601548.1| endonuclease III [Halorubrum aidingense JCM 13560]
gi|445818918|gb|EMA68767.1| endonuclease III [Halorubrum aidingense JCM 13560]
Length = 227
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E+ N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYETPEDYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEKHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ ++P+ ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITE-EQSPKAIERDLLDIVPEDD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCVLADVCPSEKGD 216
>gi|422349812|ref|ZP_16430701.1| endonuclease III [Sutterella wadsworthensis 2_1_59BFAA]
gi|404658021|gb|EKB30901.1| endonuclease III [Sutterella wadsworthensis 2_1_59BFAA]
Length = 223
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 39/222 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D+ + A RL T E I + L I +G ++ KAK++
Sbjct: 31 FELLVAVVLSAQATDKGVNIATARLFPVANTAEQIAALGVEGLTPFIQTIGLYRNKAKNV 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S+IL+ Y ++P + L LPGVG K A++ +N A+G
Sbjct: 91 VRLSEILRDEYAGEVPEDFDKLVALPGVGRKTANVVLNVAFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H+ R+S+R G K KTP++ +LE +P++
Sbjct: 133 ------------------HPTIPVDTHIFRVSNRTGLAK-GKTPDEIETKLEKIIPDAYK 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC--PQGKKELAE 367
E +H L+ G+ CK++ P CE C C P+ KK LA+
Sbjct: 174 HEAHHWLLLHGRYCCKARSPECERCPVAQWCNAPEKKKRLAD 215
>gi|448580264|ref|ZP_21644927.1| endonuclease III [Haloferax larsenii JCM 13917]
gi|445722479|gb|ELZ74141.1| endonuclease III [Haloferax larsenii JCM 13917]
Length = 227
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 38/217 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E + + +D L + I + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKVTAELFEKYDGPQEYADADQDELAEDINSITYYNNKAKY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I+ A +DI++K ++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACTDIVEK-HDGEVPDTMSELTDLAGVGRKTANVVLQHGHDIVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T+ ++L +PES
Sbjct: 143 ------------------------VVDTHVQRLSRRLGLTEEEYPER-IEEDLMPVVPES 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ +C ++ P C+ C+ +D+CP K
Sbjct: 178 DWQQFTHLFISHGRAVCDARNPDCDDCVLEDICPSSK 214
>gi|448470459|ref|ZP_21600466.1| endonuclease III [Halorubrum kocurii JCM 14978]
gi|445808023|gb|EMA58100.1| endonuclease III [Halorubrum kocurii JCM 14978]
Length = 227
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYETPEEYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + Y+ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEEYDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T ++P ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITD-EESPTKIERDLLDVVPEED 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCGDCVLADVCPSEKGD 216
>gi|186684162|ref|YP_001867358.1| endonuclease III [Nostoc punctiforme PCC 73102]
gi|186466614|gb|ACC82415.1| endonuclease III [Nostoc punctiforme PCC 73102]
Length = 229
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 46/222 (20%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKE-HGLTIENICNTSEDVLGKLIIPVGFWKTK 203
+L++ +LS+Q DE V A G+ + L I ++ L L+ GF++ K
Sbjct: 46 QLLVATILSAQCTDERVNKVTPALFGKFPDAQSLAIADLVE-----LESLVRSTGFYRNK 100
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
AK+I+ A ++ +N+ +PN +E L KLPGV K A++ + HA+GI G+
Sbjct: 101 AKNIQAACRMIVTEFNSVVPNQMEQLLKLPGVARKTANVVLAHAYGINAGVT-------- 152
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLP 323
VD HV R+ RLG T+ K P ++L LP
Sbjct: 153 ---------------------------VDTHVKRLCQRLGLTEA-KDPVRIEQDLMGLLP 184
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+S W + L+ G+ ICK++ P C C DLCP K +
Sbjct: 185 QSDWENWSIRLIYHGRAICKARSPVCVACELADLCPVANKPM 226
>gi|308069414|ref|YP_003871019.1| endonuclease III [Paenibacillus polymyxa E681]
gi|305858693|gb|ADM70481.1| Probable endonuclease III (DNA-(apurinic or apyrimidinic site)
lyase) [Paenibacillus polymyxa E681]
Length = 224
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + + E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKSPEDYLAVPLEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y +IP+ + L KLPGVG K A++ ++ A+ +
Sbjct: 90 YNLCRILIDQYGGEIPSEHDQLVKLPGVGRKTANVVVSTAFNV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG+ + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERISKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
S +H L+ FG+ CK+Q P C+ C D+C +GKK + + + K+R++
Sbjct: 174 SLTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSLIRKDKERRA 224
>gi|313127105|ref|YP_004037375.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
gi|448288427|ref|ZP_21479626.1| DNA-(apurinic or apyrimidinic site) lyase [Halogeometricum
borinquense DSM 11551]
gi|312293470|gb|ADQ67930.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
gi|445569578|gb|ELY24150.1| DNA-(apurinic or apyrimidinic site) lyase [Halogeometricum
borinquense DSM 11551]
Length = 227
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E+ + L I + F KA +
Sbjct: 35 RLELLIAVVLSAQCTDERVNEVTAELFEKYQTPEDYAAADVEELADDIYGITFHNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
++ + L + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 LQSIGETLVEEHDGEVPDTMSELTDLSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +PE+
Sbjct: 143 -----------------------VVDTHVRRLSRRLGITEE-ERPEKIEQDLMPVVPEAD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W + HL + G+ +C ++ P C+ C+ +DLCP K
Sbjct: 179 WQQFTHLFISHGRAVCDARNPDCDECVLEDLCPSSK 214
>gi|297529660|ref|YP_003670935.1| endonuclease III [Geobacillus sp. C56-T3]
gi|297252912|gb|ADI26358.1| endonuclease III [Geobacillus sp. C56-T3]
Length = 223
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T + + L + I +G ++ KA++I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L + +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMNIIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
S +H ++ FG+ CK+Q P C +C LC +GKK + +R +K+ ++
Sbjct: 175 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK 223
>gi|402773492|ref|YP_006593029.1| endonuclease III [Methylocystis sp. SC2]
gi|401775512|emb|CCJ08378.1| Endonuclease III [Methylocystis sp. SC2]
Length = 233
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L T + E+ + +LI +G ++ KAK+I
Sbjct: 53 FTLLVAVVLSAQATDAGVNKATPALFAQADTPAKMAALGEERVRELIKTIGLYRAKAKNI 112
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S +L + + D+P T E L LPGVG K A++ +N A+G +P+++
Sbjct: 113 VALSRLLIERHGGDVPRTREELSALPGVGRKTANVVLNVAFG-----------EPVIA-- 159
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD H+ R+S+RL KTPE+ LE +P+
Sbjct: 160 -----------------------VDTHIFRVSNRLPLAS-GKTPEEVEAGLERIVPDKYL 195
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK++RP C CL DLC
Sbjct: 196 LHAHHWLILHGRYVCKARRPECPRCLIADLC 226
>gi|169824416|ref|YP_001692027.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302380577|ref|ZP_07269042.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|417925970|ref|ZP_12569383.1| endonuclease III [Finegoldia magna SY403409CC001050417]
gi|167831221|dbj|BAG08137.1| endonuclease III [Finegoldia magna ATCC 29328]
gi|302311520|gb|EFK93536.1| endonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|341590572|gb|EGS33810.1| endonuclease III [Finegoldia magna SY403409CC001050417]
Length = 208
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 128 VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTS 186
+D++ D A +D + +LI+ +LS+Q D VN KEH T ++I +
Sbjct: 13 LDSLYPDAKAGLDFTTP---FELLIATILSAQCTDVRVNKVTAVLFKEHN-TPKSILDLG 68
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
D L K I G +KTK+K+I ++L +Y++ +P+ IE L KLPGVG K A++ +++
Sbjct: 69 IDGLTKYIKSCGLYKTKSKNIINTCNVLYHDYDSKVPDNIEELMKLPGVGRKTANVVVSN 128
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
A+ P + VD HV R+++R+G
Sbjct: 129 AF------------------------------------DTPAIAVDTHVFRVTNRIGIVN 152
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
K T K L +P+ WS+ +HL + G+ ICK++ P CE C+ D C
Sbjct: 153 E-KDVLSTEKALMRVIPKERWSKSHHLFIWHGRNICKARNPKCEECILNDRC 203
>gi|34811270|pdb|1P59|A Chain A, Structure Of A Non-Covalent Endonuclease Iii-Dna Complex
Length = 226
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T + + L + I +G ++ KA++I
Sbjct: 34 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 94 QKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSTAFGV----------------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 137 -------------------PAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
S +H ++ FG+ CK+Q P C +C LC +GKK + +R +K+ ++
Sbjct: 178 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK 226
>gi|451812331|ref|YP_007448785.1| endonuclease III [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778233|gb|AGF49181.1| endonuclease III [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 210
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI++MLS+Q+ D+ VN A ++G T E + + + LI VG + TKA++
Sbjct: 31 FQLLIAVMLSAQSTDKSVNSATKILFSDYG-TPELMLSIGILKMENLIKKVGLYHTKARN 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I D++ + +PNT E L LPGVG K +++ +N A+
Sbjct: 90 ILKTCDLIVNEFGGKVPNTREELESLPGVGRKTSNVVLNIAFNQ---------------- 133
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+R G K K P D KEL +PE
Sbjct: 134 --------------------PTIAVDTHVFRVSNRTGIAK-GKNPLDVEKELVKNVPEKY 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+HLL+ FG+ IC ++P C C+ KDLC
Sbjct: 173 LHNAHHLLILFGRYICIKRKPKCNQCIIKDLC 204
>gi|448449361|ref|ZP_21591690.1| endonuclease III [Halorubrum litoreum JCM 13561]
gi|445813452|gb|EMA63430.1| endonuclease III [Halorubrum litoreum JCM 13561]
Length = 227
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N S++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYHGPEDYANASQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAETHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITE-EEHPEAIEQDLLEVVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCALADVCPSEKGD 216
>gi|365840420|ref|ZP_09381609.1| endonuclease III [Anaeroglobus geminatus F0357]
gi|364561459|gb|EHM39359.1| endonuclease III [Anaeroglobus geminatus F0357]
Length = 496
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q DE + L + + I L I G + +KAK+I
Sbjct: 310 FELLVAVVLSAQCTDERVNIVTADLFPAYDSPDKILQLGLRGLEDKIKTCGLYHSKAKNI 369
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL K Y ++P+T + L KLPGVG K A++ ++ +GI
Sbjct: 370 MNTCAILCKQYKGEVPHTFDELVKLPGVGRKTANVLVSVLFGI----------------- 412
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S+R+ TPE K L+ +P W
Sbjct: 413 -------------------PAIAVDTHVFRVSNRMRLA-TGTTPEAVEKGLQKAIPRKWW 452
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
S +H L+ G++ICK+++P CETC DLCP
Sbjct: 453 SRAHHWLIWHGRRICKARKPLCETCFQNDLCPS 485
>gi|414077490|ref|YP_006996808.1| endonuclease III [Anabaena sp. 90]
gi|413970906|gb|AFW94995.1| endonuclease III [Anabaena sp. 90]
Length = 224
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 47/229 (20%)
Query: 134 DHSANVDIAPEVRRYHVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDV 189
D + ++D A V+ +L++ +LS+Q DE V GR + +E++ N
Sbjct: 25 DATCSLDYATPVQ---LLVATILSAQCTDERVNKVTPGLFGRFPD----VESLANADLTE 77
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
L +L+ GF++ KAK+I+ + ++ ++N +PN +E L KLPGV K A++ + HA+G
Sbjct: 78 LEELVRSTGFYRNKAKNIQGSCRMIVNDFNAVVPNKMEELLKLPGVARKTANVVLAHAYG 137
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
I G+ VD HV R+S RLG TK +
Sbjct: 138 INAGVT-----------------------------------VDTHVKRLSQRLGLTKNTE 162
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
P K+L LP+ W + L+ G+ +CK++ P C C DLC
Sbjct: 163 -PVGIEKDLMQLLPQPHWENWSIRLIYHGRAVCKARSPGCNLCELADLC 210
>gi|261751492|ref|ZP_05995201.1| endonuclease III [Brucella suis bv. 5 str. 513]
gi|261741245|gb|EEY29171.1| endonuclease III [Brucella suis bv. 5 str. 513]
Length = 248
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNIILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|327408294|emb|CCA30142.1| hypothetical protein NCLIV_070230 [Neospora caninum Liverpool]
Length = 480
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 112/252 (44%), Gaps = 56/252 (22%)
Query: 84 KKQNVHNKDPIPDENDTKKTKWEPAHWKEVLNNI----------REMRKHGDAPVDAMGW 133
K + +DP PD D+ EP H++E+ + R G P
Sbjct: 264 KTGSAKTQDPFPDLPDSP----EPPHFQEIWDAACGRYPSPCRSRRCMYSGTRPWIRWAL 319
Query: 134 DHSAN--VDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHG-LTIENICNTSEDVL 190
A A + R++ VL+++MLSSQTKDE A M RL++ L+ E + S L
Sbjct: 320 RRWATWRCREAAKRRKFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMNRLSVAEL 379
Query: 191 GKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGI 250
L+ VGF + KA+ +K A L + Y DIP T E L +L GVGPKMA++ WG
Sbjct: 380 SDLLYGVGFHQNKARFLKEACATLLEKYGGDIPPTYEELVQLKGVGPKMANIA---GWGR 436
Query: 251 VTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKT 310
V GI VDVHVHRI++RL W K K
Sbjct: 437 VEGIA-----------------------------------VDVHVHRITNRLNWVKT-KN 460
Query: 311 PEDTRKELESWL 322
P +T+ L+ +L
Sbjct: 461 PIETQHALQKFL 472
>gi|114704391|ref|ZP_01437299.1| endonuclease III [Fulvimarina pelagi HTCC2506]
gi|114539176|gb|EAU42296.1| endonuclease III [Fulvimarina pelagi HTCC2506]
Length = 222
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++S +LS+Q++D AA L T + I ++ + K I P G + K K +
Sbjct: 40 FRSVVSCILSAQSRDTNTKAATDNLFALATTPDAILALDDEAVAKAIKPCGLYNNKTKSL 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K L + Y+ +P T E L LPGVG K A + M+ +G
Sbjct: 100 KKLCTALIEEYDRTVPQTREGLMSLPGVGRKCADIVMSFTFG------------------ 141
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+++I V D HVHR+S+R+G T KT + T +LE P +
Sbjct: 142 ------ADVIAV------------DTHVHRVSNRIGLTDA-KTADQTAAQLEENAPAWAF 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ + L+ FG+ IC S++P CETC DLC
Sbjct: 183 HDGHFWLIQFGKAICVSRKPKCETCPVNDLC 213
>gi|376275061|ref|YP_005115500.1| endonuclease III [Brucella canis HSK A52141]
gi|363403628|gb|AEW13923.1| endonuclease III [Brucella canis HSK A52141]
Length = 239
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 45 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 104
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 105 KNIILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 149
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 150 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 187
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 188 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 221
>gi|374324412|ref|YP_005077541.1| endonuclease III [Paenibacillus terrae HPL-003]
gi|357203421|gb|AET61318.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Paenibacillus terrae HPL-003]
Length = 224
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 37/230 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + T E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKTPEDYLTVPIEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L Y +IP+ + L KLPGVG K A++ ++ A+ +
Sbjct: 90 HNLCRLLIDQYGGEIPSEHDELVKLPGVGRKTANVVVSTAFNV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL-AERVKKSPKKR 376
S +H L+ FG+ CK+Q P C+ C D+C +GKK + R++K ++R
Sbjct: 174 SLTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSRIRKDKERR 223
>gi|237814635|ref|ZP_04593633.1| endonuclease III [Brucella abortus str. 2308 A]
gi|237789472|gb|EEP63682.1| endonuclease III [Brucella abortus str. 2308 A]
Length = 260
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 66 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 125
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 126 KNVILLSEALIRDYGGEVPGDRDELMKLPGVGRKTANVVLNMAFG--------------- 170
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 171 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 208
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 209 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 242
>gi|374340010|ref|YP_005096746.1| endonuclease III [Marinitoga piezophila KA3]
gi|372101544|gb|AEX85448.1| endonuclease III [Marinitoga piezophila KA3]
Length = 210
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI++MLS+QT D + L + T + + + L + I VG +KTK+K+I
Sbjct: 32 FELLIAVMLSAQTTDNQVNKVTPELFKRFKTPYDFAKLNPEELEEYIKGVGLYKTKSKNI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL + YN +IP T E L +LPGVG K A++ ++ A+ GKD
Sbjct: 92 IKTCQILVEKYNGEIPQTREELMELPGVGRKTANVILSVAF------GKD---------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HV R+++R+G K + T ++L +P++LW
Sbjct: 136 --------------------AIAVDTHVFRVANRIGLANA-KDVKKTEEDLMKVIPKNLW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+ +H L+ G+ ICK++ P C+ C K+LC +K
Sbjct: 175 GQAHHWLIYHGRNICKARNPKCDICPIKELCDYNQK 210
>gi|304436727|ref|ZP_07396695.1| endonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370207|gb|EFM23864.1| endonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 210
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + GRL T I + L I GF++ KAKHI
Sbjct: 32 FELLIAVILSAQCTDARVNVVTGRLFPKANTPAAIAALGQAALEAEIHDCGFFRMKAKHI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL +Y ++P E L KLPGVG K A++ M+ A+
Sbjct: 92 IETCHILLNDYGGEVPADFEALQKLPGVGRKTANVVMSVAF------------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++RL V TP + K L+ +P + W
Sbjct: 133 -----------------HTPAIAVDTHVFRVANRLRLA-VGTTPLEVEKGLQKAIPRADW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
S+ +H L+ G+Q+CK+++P C+TC +CP
Sbjct: 175 SDAHHWLILHGRQVCKARKPHCDTCALAAVCPS 207
>gi|161527564|ref|YP_001581390.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
gi|160338865|gb|ABX11952.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
Length = 218
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++TKDE + L + + N + K+I +GF+ K+K I
Sbjct: 36 FSILIGTILSARTKDESTTKVVKVLFSKYKNPKQLANAKLKDVEKIIKSIGFYHVKSKRI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ I+ Y +P ++ L +LPGVG K A+ + +A+
Sbjct: 96 IEVAKIIDSKYKGKVPEDLDTLVQLPGVGRKTANCVLVYAF------------------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
EK P + VD+HVHRIS+RLG + K PE+T +EL + + W
Sbjct: 137 ---------------EK--PAIPVDIHVHRISNRLGLVET-KNPEETEQELMKKVDKKFW 178
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++N V +GQ ICK P C+ C K C
Sbjct: 179 IDINDTFVMYGQNICKPISPMCDVCKIKRSC 209
>gi|225677186|ref|ZP_03788182.1| endonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225590773|gb|EEH12004.1| endonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 212
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 43/214 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS++T D + L T E + + + L K I +G + +KAK+I
Sbjct: 30 FTLLVAIVLSARTTDVSVNKITRELFNIADTPEKMLSFGQSELKKCISSIGLYNSKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN+ +P + L LPGVG K A++ +N GI
Sbjct: 90 IGLSKILVERYNSKVPTNFDDLVSLPGVGRKSANVFLNSGLGI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESWLPE 324
P L VD HV R+S+R+G K VFKT + L + +P+
Sbjct: 133 -------------------PTLAVDTHVFRVSNRIGLVKEKDVFKTEQS----LLNVVPK 169
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H LV G+ +CK+Q+PSCETC+ DLC
Sbjct: 170 KYLLYAHHWLVLHGRYVCKAQKPSCETCIIHDLC 203
>gi|157692734|ref|YP_001487196.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus pumilus
SAFR-032]
gi|157681492|gb|ABV62636.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus pumilus
SAFR-032]
Length = 220
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKTLFQKYKTPEDYLSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + Y ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLSKMLIEEYGGEVPKDRDELVKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +PE W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPEEDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+QRP CE+C D+C +G+K L
Sbjct: 175 SVTHHRLIFFGRYHCKAQRPQCESCPLLDMCREGQKRL 212
>gi|56420704|ref|YP_148022.1| endonuclease III [Geobacillus kaustophilus HTA426]
gi|261417992|ref|YP_003251674.1| endonuclease III [Geobacillus sp. Y412MC61]
gi|319767195|ref|YP_004132696.1| endonuclease III [Geobacillus sp. Y412MC52]
gi|448238463|ref|YP_007402521.1| endonuclease III [Geobacillus sp. GHH01]
gi|56380546|dbj|BAD76454.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Geobacillus kaustophilus HTA426]
gi|261374449|gb|ACX77192.1| endonuclease III [Geobacillus sp. Y412MC61]
gi|317112061|gb|ADU94553.1| endonuclease III [Geobacillus sp. Y412MC52]
gi|445207305|gb|AGE22770.1| endonuclease III [Geobacillus sp. GHH01]
Length = 223
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T + + L + I +G ++ KA++I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
S +H ++ FG+ CK+Q P C +C LC +GKK + +R +K+ ++
Sbjct: 175 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK 223
>gi|303233806|ref|ZP_07320460.1| endonuclease III [Finegoldia magna BVS033A4]
gi|302495240|gb|EFL54992.1| endonuclease III [Finegoldia magna BVS033A4]
Length = 208
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 42/232 (18%)
Query: 128 VDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTS 186
+D++ D A +D + +LI+ +LS+Q D VN KEH T ++I +
Sbjct: 13 LDSLYPDAKAGLDFTTP---FELLIATILSAQCTDVRVNKVTAVLFKEHN-TPKSILDLG 68
Query: 187 EDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNH 246
D L K I G +KTK+K+I ++L +Y++ +P+ IE L KLPGVG K A++ +++
Sbjct: 69 IDGLTKYIKSCGLYKTKSKNIINTCNVLYHDYDSKVPDNIEELMKLPGVGRKTANVVVSN 128
Query: 247 AWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK 306
A+ P + VD HV R+++R+G
Sbjct: 129 AF------------------------------------DTPAIAVDTHVFRVTNRIGIVN 152
Query: 307 VFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
K T K L +P+ WS+ +HL + G+ ICK++ P CE C+ D C
Sbjct: 153 E-KDVLSTEKALMRVIPKERWSKSHHLFIWHGRNICKARNPKCEECILNDRC 203
>gi|363889402|ref|ZP_09316764.1| endonuclease III [Eubacteriaceae bacterium CM5]
gi|361966696|gb|EHL19588.1| endonuclease III [Eubacteriaceae bacterium CM5]
Length = 212
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 45/225 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH- 206
Y +L++ +LS+Q+ D+ + L + T E + N E+ L + I +GF+ TK+K+
Sbjct: 28 YELLVATILSAQSTDKRVNIVTKDLFKVADTPEKMVNLGEEKLKEYIRTIGFFNTKSKNL 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I M+ D+++K YN+++P T+E L L GVG K A++ M++ +
Sbjct: 88 ISMSRDLIQK-YNSEVPKTMEELTSLAGVGRKTANVVMSNCF------------------ 128
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESWLP 323
K+P + VD HV R++HRLG++K V+K D +K+ +
Sbjct: 129 ------------------KVPAIAVDTHVFRLAHRLGFSKEEDVYKVELDLQKK----IA 166
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+ W+ +H+L+ G+ CK++ P CE C K+ C K L ++
Sbjct: 167 KKDWTLAHHMLIFHGRYTCKAKNPLCEKCNLKEYCLYYKNILKKK 211
>gi|448328069|ref|ZP_21517385.1| endonuclease III [Natrinema versiforme JCM 10478]
gi|445616664|gb|ELY70284.1| endonuclease III [Natrinema versiforme JCM 10478]
Length = 227
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ +D L + + + ++ +KA++
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEKYDGAEDYATVDQDELAEDLNSITYYNSKAEY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + + ++++ ++P+T++ L +L GVG K A++ + H IV GI
Sbjct: 95 IRDSCATILEDHDGEVPDTMDELTELSGVGRKTANVVLQHGHDIVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-EYPERIEQDLIEIVPEDD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C +Q P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTAQNPDCADCVLADICPSEKGD 216
>gi|332799445|ref|YP_004460944.1| endonuclease III [Tepidanaerobacter acetatoxydans Re1]
gi|438002612|ref|YP_007272355.1| Endonuclease III [Tepidanaerobacter acetatoxydans Re1]
gi|332697180|gb|AEE91637.1| endonuclease III [Tepidanaerobacter acetatoxydans Re1]
gi|432179406|emb|CCP26379.1| Endonuclease III [Tepidanaerobacter acetatoxydans Re1]
Length = 228
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q D+ + RL + ++ ++ L + I G +K K+K+I
Sbjct: 41 FELLIATILSAQCTDKRVNKVTERLFKKYKGPKDFAEANKSELEQDIKECGIFKNKSKNI 100
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN +P+ + L +LPGVG K A++ + +A+G
Sbjct: 101 IETSKILFEKYNGQVPSNFDELIELPGVGRKTANVVLANAFGK----------------- 143
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P VD HV+R++HRLG++ K + ++L +PE+LW
Sbjct: 144 -------------------PAFAVDTHVYRLAHRLGFSDK-KNLIEVERDLREKIPENLW 183
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+ +H L+ G+ IC++++P C+ CL DLC + +K +
Sbjct: 184 IKAHHWLIYHGRNICRARKPLCDECLLSDLCLKFQKAI 221
>gi|17988065|ref|NP_540699.1| endonuclease III [Brucella melitensis bv. 1 str. 16M]
gi|225851699|ref|YP_002731932.1| endonuclease III [Brucella melitensis ATCC 23457]
gi|256264790|ref|ZP_05467322.1| endonuclease III [Brucella melitensis bv. 2 str. 63/9]
gi|260563238|ref|ZP_05833724.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|261215298|ref|ZP_05929579.1| endonuclease III [Brucella abortus bv. 3 str. Tulya]
gi|261218166|ref|ZP_05932447.1| endonuclease III [Brucella ceti M13/05/1]
gi|261221393|ref|ZP_05935674.1| endonuclease III [Brucella ceti B1/94]
gi|261314621|ref|ZP_05953818.1| endonuclease III [Brucella pinnipedialis M163/99/10]
gi|261316823|ref|ZP_05956020.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|261320986|ref|ZP_05960183.1| endonuclease III [Brucella ceti M644/93/1]
gi|261324280|ref|ZP_05963477.1| endonuclease III [Brucella neotomae 5K33]
gi|261759280|ref|ZP_06002989.1| endonuclease III [Brucella sp. F5/99]
gi|265983343|ref|ZP_06096078.1| endonuclease III [Brucella sp. 83/13]
gi|265987893|ref|ZP_06100450.1| endonuclease III [Brucella pinnipedialis M292/94/1]
gi|265992368|ref|ZP_06104925.1| endonuclease III [Brucella melitensis bv. 1 str. Rev.1]
gi|265997354|ref|ZP_06109911.1| endonuclease III [Brucella ceti M490/95/1]
gi|306839612|ref|ZP_07472416.1| endonuclease III [Brucella sp. NF 2653]
gi|306842549|ref|ZP_07475200.1| endonuclease III [Brucella sp. BO2]
gi|340789788|ref|YP_004755252.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|384407640|ref|YP_005596261.1| endonuclease III [Brucella melitensis M28]
gi|17983814|gb|AAL52963.1| endonuclease iii [Brucella melitensis bv. 1 str. 16M]
gi|225640064|gb|ACN99977.1| endonuclease III [Brucella melitensis ATCC 23457]
gi|260153254|gb|EEW88346.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260916905|gb|EEX83766.1| endonuclease III [Brucella abortus bv. 3 str. Tulya]
gi|260919977|gb|EEX86630.1| endonuclease III [Brucella ceti B1/94]
gi|260923255|gb|EEX89823.1| endonuclease III [Brucella ceti M13/05/1]
gi|261293676|gb|EEX97172.1| endonuclease III [Brucella ceti M644/93/1]
gi|261296046|gb|EEX99542.1| endonuclease III [Brucella pinnipedialis B2/94]
gi|261300260|gb|EEY03757.1| endonuclease III [Brucella neotomae 5K33]
gi|261303647|gb|EEY07144.1| endonuclease III [Brucella pinnipedialis M163/99/10]
gi|261739264|gb|EEY27260.1| endonuclease III [Brucella sp. F5/99]
gi|262551822|gb|EEZ07812.1| endonuclease III [Brucella ceti M490/95/1]
gi|263003434|gb|EEZ15727.1| endonuclease III [Brucella melitensis bv. 1 str. Rev.1]
gi|263095199|gb|EEZ18868.1| endonuclease III [Brucella melitensis bv. 2 str. 63/9]
gi|264660090|gb|EEZ30351.1| endonuclease III [Brucella pinnipedialis M292/94/1]
gi|264661935|gb|EEZ32196.1| endonuclease III [Brucella sp. 83/13]
gi|306287405|gb|EFM58885.1| endonuclease III [Brucella sp. BO2]
gi|306405310|gb|EFM61585.1| endonuclease III [Brucella sp. NF 2653]
gi|326408187|gb|ADZ65252.1| endonuclease III [Brucella melitensis M28]
gi|340558246|gb|AEK53484.1| endonuclease III [Brucella pinnipedialis B2/94]
Length = 248
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|265994111|ref|ZP_06106668.1| endonuclease III [Brucella melitensis bv. 3 str. Ether]
gi|262765092|gb|EEZ11013.1| endonuclease III [Brucella melitensis bv. 3 str. Ether]
Length = 248
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|389573143|ref|ZP_10163219.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus sp. M 2-6]
gi|388427300|gb|EIL85109.1| DNA-(apurinic or apyrimidinic site) lyase [Bacillus sp. M 2-6]
Length = 220
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKHLFQKYKTPEDYLSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L ++Y ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLSQMLIEDYGGEVPRDRDELIKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPKEDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+QRP CE+C D+C +G+K L
Sbjct: 175 SVTHHRLIFFGRYHCKAQRPQCESCPLLDMCREGQKRL 212
>gi|91773087|ref|YP_565779.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanococcoides burtonii DSM 6242]
gi|91712102|gb|ABE52029.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 204
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y++LIS +LS +T+DEV +L T + N D + +LI VGF++ K+ +
Sbjct: 27 YYILISTVLSQRTRDEVTIPTTQKLFSVFDTPPKMANADADEIQELIRNVGFYRVKSHRL 86
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S +L Y+ +P+ I L KLPGVG K A+ + +A+ KD
Sbjct: 87 IEISRMLLDEYDGIVPDDINELVKLPGVGRKTANCVLTYAFD------KD---------- 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HVHRIS+R+G K TPE+T EL + + +W
Sbjct: 131 --------------------AIAVDTHVHRISNRMGLVKT-TTPEETEIELGKVVEKEMW 169
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++N L+V FG+ C+ P C+ C+ D+CP+
Sbjct: 170 KDINGLMVLFGKSTCRPVSPKCDECIMNDICPK 202
>gi|375009225|ref|YP_004982858.1| endonuclease III [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288074|gb|AEV19758.1| endonuclease III [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 223
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T + + L + I +G ++ KA++I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
S +H ++ FG+ CK+Q P C +C LC +GKK + +R +K+ ++
Sbjct: 175 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK 223
>gi|323137137|ref|ZP_08072216.1| endonuclease III [Methylocystis sp. ATCC 49242]
gi|322397495|gb|EFY00018.1| endonuclease III [Methylocystis sp. ATCC 49242]
Length = 229
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L T E + ED + + I +G +++KAK++
Sbjct: 49 FILLVAVVLSAQATDAGVNKATPALFAMADTAEKMVALGEDRVREAIKTIGLFRSKAKNV 108
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S +L + + D+P T E L LPGVG K A++ +N A+ QP+++
Sbjct: 109 VALSQLLIERHGGDVPRTREELTALPGVGRKTANVVLNIAY-----------HQPVIA-- 155
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD H+ R+S+RL K TPE LES +PE
Sbjct: 156 -----------------------VDTHIFRVSNRLPLAK-GATPEAVEAGLESIVPEEYL 191
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P C CL DLC
Sbjct: 192 LHAHHWLILHGRYVCKARKPECPRCLINDLC 222
>gi|256368630|ref|YP_003106136.1| endonuclease III [Brucella microti CCM 4915]
gi|255998788|gb|ACU47187.1| endonuclease III [Brucella microti CCM 4915]
Length = 248
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNTFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|34811453|pdb|1ORN|A Chain A, Structure Of A Trapped Endonuclease Iii-Dna Covalent
Intermediate: Estranged-Guanine Complex
gi|34811456|pdb|1ORP|A Chain A, Structure Of A Trapped Endonuclease Iii-Dna Covalent
Intermediate: Estranged-Adenine Complex
Length = 226
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + RL E T + + L + I +G ++ KA++I
Sbjct: 34 FELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNI 93
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 94 QKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGV----------------- 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 137 -------------------PAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEW 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKR 376
S +H ++ FG+ CK+Q P C +C LC +GKK + +R +K+ ++
Sbjct: 178 SITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMRKREEKAANQK 226
>gi|254422830|ref|ZP_05036548.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
gi|196190319|gb|EDX85283.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
Length = 216
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 132 GWDHSANVDIAPEVRR--YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDV 189
+ +A +A E R + L+S ++S +T DEV+ +L + T + + S
Sbjct: 20 AYPKAAMFQLAEEGYRSAFEQLVSCIISVRTYDEVSLPVSRQLFKRANTPQAMSELSVAE 79
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
+ LI + + KA I + + + +Y+ +P + L GVGPK AHL + A
Sbjct: 80 IEALIRRSTYAERKAHQIWVIAQEIVNHYDGILPCDVNTLLAFKGVGPKCAHLTLGIA-- 137
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
CE+ P + VDVHVHR+ +R G+ K
Sbjct: 138 --------------------------------CEQ--PYISVDVHVHRVVNRWGYVAT-K 162
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
TPE T + L + LP+ LW E N LL+ FG+QICK Q P C C +D CP+
Sbjct: 163 TPEKTTQALAAKLPKGLWIETNKLLMPFGKQICKGQYPLCTQCPLEDSCPR 213
>gi|427709297|ref|YP_007051674.1| DNA-(apurinic or apyrimidinic site) lyase [Nostoc sp. PCC 7107]
gi|427361802|gb|AFY44524.1| endonuclease III [Nostoc sp. PCC 7107]
Length = 222
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 44/219 (20%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V GR + ++ N L L+ GF+ KA
Sbjct: 39 QLLVATILSAQCTDERVNKVTPNLFGRFPDAA----SLANADLAELENLVRSTGFYHNKA 94
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+I+ A ++ + + +PN +E L KLPGV K A++ + HA+GI G+
Sbjct: 95 KNIQAACRMIVNEFGSVVPNQMEQLLKLPGVARKTANVVLAHAYGINAGVT--------- 145
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R+S RLG TK + P ++L LP+
Sbjct: 146 --------------------------VDTHVKRLSQRLGLTK-YAEPVKIEQDLMKLLPQ 178
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+ W + L+ G+ +CK++ P+C C DLCP K
Sbjct: 179 ADWENWSIRLIYHGRAVCKARSPACGACQMADLCPTSDK 217
>gi|383622576|ref|ZP_09948982.1| endonuclease III [Halobiforma lacisalsi AJ5]
gi|448694519|ref|ZP_21697019.1| endonuclease III [Halobiforma lacisalsi AJ5]
gi|445785104|gb|EMA35899.1| endonuclease III [Halobiforma lacisalsi AJ5]
Length = 227
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E + +D L + + ++ KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNRETEHLFEKYDGPADYVEVPQDELAADLDSITYYNNKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + +++ ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IQSACEAILEDHGGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ K PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-KRPEAIEQELMGIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ IC ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRAICTARNPDCSGCVLADICPSEKGD 216
>gi|297617011|ref|YP_003702170.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
gi|297144848|gb|ADI01605.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
Length = 225
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 39/215 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L+++MLS++T DE VN G E + +++ + +L +I G ++ KA++
Sbjct: 31 FQLLVAVMLSARTTDEQVNRVTRGLFAEVK-SPKDLASMEVGILEDMIKGCGLYRQKARN 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ + IL + + ++P + L +LPGVG K A++ ++ G K
Sbjct: 90 LIALARILMEEFGGEVPTDFDQLLRLPGVGRKTANVVVS------VGFAK---------- 133
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P L VD HV R+S RLGW + P+ EL+ +PES
Sbjct: 134 --------------------PGLGVDTHVLRVSRRLGWHNA-RDPQVAEAELKRIIPESW 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W+ +HL + G+ +C++++P C+ C + C G
Sbjct: 173 WARAHHLFISHGRAVCRARKPDCDRCTIRLYCQYG 207
>gi|310824392|ref|YP_003956750.1| base excision DNA repair protein [Stigmatella aurantiaca DW4/3-1]
gi|309397464|gb|ADO74923.1| Base excision DNA repair protein, HhH-GPD family [Stigmatella
aurantiaca DW4/3-1]
Length = 226
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L++ +LS +T+DEV+ L T E + + + + LI V F + KA+ I
Sbjct: 44 FEQLVACILSIRTRDEVSLPTSLALLRRAHTPEAMSQLTPEEIEALIAQVTFPEPKARQI 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + +P E+L GVGPK AHL + A G E+
Sbjct: 104 HALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACG-------HEA-------- 148
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD+HVHR+++R G+ + ++PE T K LE+ LP + W
Sbjct: 149 ---------------------ISVDIHVHRVTNRWGYVRT-RSPEQTLKALEARLPRAYW 186
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
E+N LLV FG+ +C RP C C +C Q
Sbjct: 187 IEINRLLVPFGKHVCTGSRPQCSRCPVLAMCQQ 219
>gi|306844432|ref|ZP_07477022.1| endonuclease III [Brucella inopinata BO1]
gi|306275245|gb|EFM56995.1| endonuclease III [Brucella inopinata BO1]
Length = 248
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNVILLSEALIRDYGGEVPGDRDELMKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|337747107|ref|YP_004641269.1| hypothetical protein KNP414_02839 [Paenibacillus mucilaginosus
KNP414]
gi|379720962|ref|YP_005313093.1| hypothetical protein PM3016_3078 [Paenibacillus mucilaginosus 3016]
gi|386723570|ref|YP_006189896.1| hypothetical protein B2K_15605 [Paenibacillus mucilaginosus K02]
gi|336298296|gb|AEI41399.1| Nth [Paenibacillus mucilaginosus KNP414]
gi|378569634|gb|AFC29944.1| Nth [Paenibacillus mucilaginosus 3016]
gi|384090695|gb|AFH62131.1| hypothetical protein B2K_15605 [Paenibacillus mucilaginosus K02]
Length = 231
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q DE + L E+ + L + I +G ++ KAK+I
Sbjct: 30 FELTIAVLLSAQCTDETVNKVTATLFSKYRKPEDYLAVPLEELEQDIRRIGLYRNKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL Y+ ++P E L +LPGVG K A++ +++A+G+
Sbjct: 90 QALCAILLDKYDGEVPQEHEKLVELPGVGRKTANVVVSNAFGV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGFAAHKDSVLEVEKKLMKRVPREEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSP 373
++ +H L+ FG+ CK+Q P C C DLC +GKK + + P
Sbjct: 174 TDTHHRLIFFGRYHCKAQNPKCGECPLLDLCREGKKRMKTNSSRKP 219
>gi|410941130|ref|ZP_11372929.1| endonuclease III [Leptospira noguchii str. 2006001870]
gi|410783689|gb|EKR72681.1| endonuclease III [Leptospira noguchii str. 2006001870]
Length = 232
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y + I+++LS+Q DE + L ++ T+E+ N+ + LI GF++ KAK I
Sbjct: 49 YELAIAVILSAQCTDERVNQVTPSLFKNFPTLESFANSDLKNIETLIFSTGFYRNKAKSI 108
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + L + ++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 109 QGFAKKLIQEFDGKIPKTIAELITLPGFGRKTANVVLSEVHGLVEGI------------- 155
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV+R+S LG T P K+L S LPE W
Sbjct: 156 ----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKYW 192
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+++ L+ G++ CK+ R CE C+ K CP
Sbjct: 193 RDISLYLIFLGRKSCKAHRRFCEDCILKKDCP 224
>gi|302520843|ref|ZP_07273185.1| endonuclease III [Streptomyces sp. SPB78]
gi|302429738|gb|EFL01554.1| endonuclease III [Streptomyces sp. SPB78]
Length = 294
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D VN ++ T E++ + L +LI P GF++ KA+
Sbjct: 76 FQLLVATVLSAQTTDLRVNQTTPALFAKYP-TPEDMAAAVPEELEELIRPTGFFRAKARS 134
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ S L+ +++ ++P T++ L KLPGVG K A + + +A+G
Sbjct: 135 LLGLSAALRDDFDGEVPATVDALVKLPGVGRKTAFVVLGNAFG----------------- 177
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD H R++ R WT + P ++ + S
Sbjct: 178 -------------------VPGITVDTHFGRLARRWKWTTS-EDPVKVESDVAAIFEPSE 217
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W+ ++H ++ G++IC S+RP+C C LCP
Sbjct: 218 WTMLSHRVIFHGRRICHSRRPACGACPVAPLCPS 251
>gi|62289142|ref|YP_220935.1| endonuclease III [Brucella abortus bv. 1 str. 9-941]
gi|82699081|ref|YP_413655.1| helix-hairpin-helix DNA-binding domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|189023417|ref|YP_001934185.1| Nth, endonuclease III [Brucella abortus S19]
gi|260546439|ref|ZP_05822179.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260756021|ref|ZP_05868369.1| endonuclease III [Brucella abortus bv. 6 str. 870]
gi|260759245|ref|ZP_05871593.1| endonuclease III [Brucella abortus bv. 4 str. 292]
gi|260760967|ref|ZP_05873310.1| endonuclease III [Brucella abortus bv. 2 str. 86/8/59]
gi|260885042|ref|ZP_05896656.1| endonuclease III [Brucella abortus bv. 9 str. C68]
gi|297247558|ref|ZP_06931276.1| endonuclease III [Brucella abortus bv. 5 str. B3196]
gi|376271924|ref|YP_005150502.1| endonuclease III [Brucella abortus A13334]
gi|423167694|ref|ZP_17154397.1| endonuclease III [Brucella abortus bv. 1 str. NI435a]
gi|423169930|ref|ZP_17156605.1| endonuclease III [Brucella abortus bv. 1 str. NI474]
gi|423175079|ref|ZP_17161748.1| endonuclease III [Brucella abortus bv. 1 str. NI486]
gi|423178070|ref|ZP_17164715.1| endonuclease III [Brucella abortus bv. 1 str. NI488]
gi|423179363|ref|ZP_17166004.1| endonuclease III [Brucella abortus bv. 1 str. NI010]
gi|423182493|ref|ZP_17169130.1| endonuclease III [Brucella abortus bv. 1 str. NI016]
gi|423186564|ref|ZP_17173178.1| endonuclease III [Brucella abortus bv. 1 str. NI021]
gi|423190998|ref|ZP_17177606.1| endonuclease III [Brucella abortus bv. 1 str. NI259]
gi|62195274|gb|AAX73574.1| Nth, endonuclease III [Brucella abortus bv. 1 str. 9-941]
gi|82615182|emb|CAJ10121.1| Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding,
class 1:Endonuclease III, HhH:Endonuclease III/Nth
[Brucella melitensis biovar Abortus 2308]
gi|189018989|gb|ACD71711.1| Nth, endonuclease III [Brucella abortus S19]
gi|260096546|gb|EEW80422.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669563|gb|EEX56503.1| endonuclease III [Brucella abortus bv. 4 str. 292]
gi|260671399|gb|EEX58220.1| endonuclease III [Brucella abortus bv. 2 str. 86/8/59]
gi|260676129|gb|EEX62950.1| endonuclease III [Brucella abortus bv. 6 str. 870]
gi|260874570|gb|EEX81639.1| endonuclease III [Brucella abortus bv. 9 str. C68]
gi|297174727|gb|EFH34074.1| endonuclease III [Brucella abortus bv. 5 str. B3196]
gi|363399530|gb|AEW16500.1| endonuclease III [Brucella abortus A13334]
gi|374537310|gb|EHR08823.1| endonuclease III [Brucella abortus bv. 1 str. NI486]
gi|374541128|gb|EHR12627.1| endonuclease III [Brucella abortus bv. 1 str. NI435a]
gi|374542166|gb|EHR13655.1| endonuclease III [Brucella abortus bv. 1 str. NI474]
gi|374547554|gb|EHR19008.1| endonuclease III [Brucella abortus bv. 1 str. NI488]
gi|374550882|gb|EHR22317.1| endonuclease III [Brucella abortus bv. 1 str. NI010]
gi|374551339|gb|EHR22773.1| endonuclease III [Brucella abortus bv. 1 str. NI016]
gi|374553688|gb|EHR25102.1| endonuclease III [Brucella abortus bv. 1 str. NI259]
gi|374558243|gb|EHR29637.1| endonuclease III [Brucella abortus bv. 1 str. NI021]
Length = 248
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 54 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 113
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 114 KNVILLSEALIRDYGGEVPGDRDELMKLPGVGRKTANVVLNMAFG--------------- 158
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 159 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 196
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 197 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 230
>gi|363896810|ref|ZP_09323359.1| endonuclease III [Oribacterium sp. ACB7]
gi|361960375|gb|EHL13624.1| endonuclease III [Oribacterium sp. ACB7]
Length = 240
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 39/230 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L + +LS+Q D + +L + ++E+ + + L + I GF+ KAK+I
Sbjct: 40 WQLLFATILSAQCTDARVNMVTEKLFQKYKSLEDFASCNLKELEEDIHSTGFYHNKAKNI 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + +L + Y ++P I+ L LPGVG K +L + + +
Sbjct: 100 KACATVLVEEYGGEVPKDIDSLTALPGVGRKTGNLILGNIF------------------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV RIS+RLG P T +L LPE W
Sbjct: 141 -----------------HIPSIVVDTHVKRISNRLGLADS-SDPTKTEFQLMDVLPEEFW 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
N ++ G+ +C SQ+P CE C DLCP K + +SP +RK
Sbjct: 183 IRWNTHIIALGRTLCTSQKPKCELCYLNDLCPSVKGD--PETWRSPAERK 230
>gi|310658405|ref|YP_003936126.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[[Clostridium] sticklandii]
gi|308825183|emb|CBH21221.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[[Clostridium] sticklandii]
Length = 209
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L++ +LS+Q+ D + L ++ T E I E+ L + I +GF+ K+K+I
Sbjct: 28 YELLVATVLSAQSTDVRVNIVTKELFKNYNTPEKILKLGEEKLMEYIKSIGFYNVKSKNI 87
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S +L +NY++ +P+ ++ L KLPGVG K A++ +++ +G
Sbjct: 88 IALSHLLIQNYDSQVPDEMDELLKLPGVGRKTANVVLSNCFG------------------ 129
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S RLG++ K P ++L + + W
Sbjct: 130 ------------------VPAIAVDTHVFRVSTRLGFSDK-KDPLQVEQDLMKKISKKYW 170
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
++ +H + G++ICK++ P CE C + C KK+
Sbjct: 171 TDAHHAFIFHGRRICKARNPICELCSVQSYCKFYKKK 207
>gi|268323381|emb|CBH36969.1| putative endonuclease [uncultured archaeon]
Length = 213
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y LIS +LS +TKDEV A RL T ++ ++ + + I PVGF++ KA+ I
Sbjct: 31 YLTLISCLLSLRTKDEVTARASKRLFALAKTPADMLQHKKEDIERAIYPVGFYRRKAEQI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L NY++ +P E L KL GVG K A++ + A+
Sbjct: 91 LAISHTLVANYDSKVPAEREELLKLKGVGRKTANIVITMAYN------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HVHRIS+RLG K P T L+ L + W
Sbjct: 133 ------------------KPGIAVDTHVHRISNRLGLVAT-KDPYQTELALQKALAKQHW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+N LLV GQ IC P C C C Q
Sbjct: 174 KVLNELLVLHGQTICTPISPKCSICPITKYCEQ 206
>gi|420145504|ref|ZP_14652968.1| Endonuclease III [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
gi|398402878|gb|EJN56169.1| Endonuclease III [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
Length = 216
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +IS+MLS+Q D + +L E + SE L I +G ++ KAKH+
Sbjct: 31 FQYMISVMLSAQATDISVNKVTPKLFRDFPDPEAMAAASETALQADIHSIGLYRNKAKHM 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K AS L ++N +P+T L +LPGVG K A + + A+G
Sbjct: 91 KAASQALLDDFNGVVPSTRAELMQLPGVGRKTADVVLADAFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VD HV R++ RL T + + + LPE LW
Sbjct: 133 ------------------IPAFAVDTHVTRVTKRLRMVPQKATVLEIEQRMMKLLPEDLW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ C ++ P CE C +C G++ L
Sbjct: 175 VTAHHRMIYFGRYHCLARAPKCEQCPLLSMCADGQRRL 212
>gi|323144835|ref|ZP_08079404.1| endonuclease III [Succinatimonas hippei YIT 12066]
gi|322415360|gb|EFY06125.1| endonuclease III [Succinatimonas hippei YIT 12066]
Length = 238
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L +++LS+Q D + A L + T E +C + + I +G W+ KAK++
Sbjct: 57 FELLCAVVLSAQATDASVNKATPALFKVAPTPELMCKLGAEGIAPYIKTIGLWRNKAKNL 116
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
++ S IL + YN+ +P+T E L KLPGVG K A + +N A+
Sbjct: 117 QILSQILYEKYNSQVPDTYEELIKLPGVGSKTAKVVLNVAF------------------- 157
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K P + VD H+ R+ +R G V KT ++ L + + +
Sbjct: 158 -----------------KKPYIAVDTHIFRVCNRTGLC-VGKTVKEVEDNLPALIDKEFI 199
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ +H ++ G+ +CK+QRP C +C+ ++ C
Sbjct: 200 QDAHHYILLHGRYVCKAQRPQCSSCVIREYC 230
>gi|410459338|ref|ZP_11313089.1| endonuclease III [Bacillus azotoformans LMG 9581]
gi|409930314|gb|EKN67315.1| endonuclease III [Bacillus azotoformans LMG 9581]
Length = 217
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L E E+ S + L I +G ++ KAK+I
Sbjct: 31 FELVIAVSLSAQCTDALVNKVTKSLFEKYKKPEDYLAVSLEELQNDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++L + Y +P L KLPGVG K A++ M+ A+GI
Sbjct: 91 QKLCNMLLEEYGGVVPKDRLSLMKLPGVGRKTANVVMSVAYGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +PE LW
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEETLMKKVPEELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S+ +H L+ FG+ CK+QRP CE C D+C +G K +
Sbjct: 175 SQTHHRLIFFGRYHCKAQRPQCEICPLLDICREGHKRM 212
>gi|384210538|ref|YP_005599620.1| endonuclease III [Brucella melitensis M5-90]
gi|326537901|gb|ADZ86116.1| endonuclease III [Brucella melitensis M5-90]
Length = 239
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 45 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 104
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 105 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 149
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 150 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 187
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 188 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 221
>gi|390453557|ref|ZP_10239085.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Paenibacillus peoriae KCTC 3763]
Length = 224
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + + E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKSPEDYLAVPIEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y +IP+ + L KLPGVG K A++ ++ A+ +
Sbjct: 90 HNLCRILIDQYGGEIPSEHDQLVKLPGVGRKTANVVVSTAFNV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
S +H L+ FG+ CK+Q P C+ C D+C +GKK + + + K+R++
Sbjct: 174 SLTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSLIRKDKERRA 224
>gi|262038946|ref|ZP_06012286.1| endonuclease III [Leptotrichia goodfellowii F0264]
gi|261747027|gb|EEY34526.1| endonuclease III [Leptotrichia goodfellowii F0264]
Length = 224
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 36/220 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y ++I+++LS+Q D + L + T E+I N + L K I GF++ KAK+I
Sbjct: 31 YQLMIAVILSAQCTDARVNIVTKELFKVVKTPEDIHNMDLETLEKYIKSTGFYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K+ ++ + YN IP ++ L KL GVG K A++ + WGI GI
Sbjct: 91 KLNAEQVLNEYNGKIPKKMDELVKLAGVGRKTANVVLGEVWGISEGI------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S R+G TK PE +EL +P+ W
Sbjct: 138 ----------------------VVDTHVKRLSKRMGLTKS-DNPEIIERELMKIVPKKYW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAE 367
+H L+ +G+++ + P C+ C+ +KE AE
Sbjct: 175 FVFSHYLILYGREVSTAINPKCDICIINKYFNYCEKEKAE 214
>gi|193214276|ref|YP_001995475.1| endonuclease III [Chloroherpeton thalassium ATCC 35110]
gi|193087753|gb|ACF13028.1| endonuclease III [Chloroherpeton thalassium ATCC 35110]
Length = 213
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +L++Q D+ + L + +++ S + L + I + F KAK+I
Sbjct: 31 FQLLVATILAAQCTDKRVNLVTAALFQRYPDAKSMSELSFEALREEIKSINFLNNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+S L + YN ++P+T++ L LPGVG K AH+ M++A+G +P+L+
Sbjct: 91 LDSSKALVEKYNGEVPDTLDALTALPGVGRKTAHVVMSNAFG-----------KPVLA-- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HVHR+++RLG K DT +L LPESL
Sbjct: 138 -----------------------VDTHVHRVANRLGLANS-KNVRDTENQLMEILPESLV 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H L+ G+ CK++ P C C +C
Sbjct: 174 SDFHHYLILHGRYTCKARSPQCMNCELTHIC 204
>gi|392989624|ref|YP_006488217.1| endonuclease III [Enterococcus hirae ATCC 9790]
gi|392337044|gb|AFM71326.1| endonuclease III [Enterococcus hirae ATCC 9790]
Length = 220
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 36/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+++LS+Q D + A L E T E + D + I +G ++ KAK+I
Sbjct: 31 YELLIAVILSAQATDVSVNKATPALFEAFPTPEKLAAAPIDDIIPKIKTIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L ++ +P T E L LPGVG K A++ + A+GI
Sbjct: 91 KACAQQLMDRFSGQVPQTREELISLPGVGRKTANVVLGDAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R++ RL K+ + + + L +P+ LW
Sbjct: 134 -------------------PAIAVDTHVERVTKRLRICKLNASVLEVEETLMRKVPKELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+ +H L+ FG+ C ++ P CE C D+C GK + E+
Sbjct: 175 VKTHHTLIFFGRYHCTARSPRCEVCPLLDMCQDGKNRMKEK 215
>gi|384444254|ref|YP_005602973.1| endonuclease III [Brucella melitensis NI]
gi|349742250|gb|AEQ07793.1| endonuclease III [Brucella melitensis NI]
Length = 232
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L T + + E+ +G+ I +G W+ KA
Sbjct: 38 VNAFTLLVAVVLSAQATDAGVNKATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKA 97
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ + S+ L ++Y ++P + L KLPGVG K A++ +N A+G
Sbjct: 98 KNVILLSEALIRDYGGEVPGDRDELVKLPGVGRKTANVVLNMAFG--------------- 142
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 143 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEAVEAILVRVIPR 180
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ +CK+++P CE C+ DLC
Sbjct: 181 EYMLHAHHWLILHGRYVCKARKPECEKCVIADLC 214
>gi|408356631|ref|YP_006845162.1| endonuclease III [Amphibacillus xylanus NBRC 15112]
gi|407727402|dbj|BAM47400.1| endonuclease III [Amphibacillus xylanus NBRC 15112]
Length = 218
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++++LS+Q DE VN K++ + I E+ L + I +G ++ KAK+
Sbjct: 31 FELLVAVVLSAQATDEHVNKVTKDLFKKYKTPYDYISVPLEE-LQQDIKSIGLFRNKAKN 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ S+ L YN +P T E L L GVG K A++ ++ A+G+
Sbjct: 90 IQKLSETLINEYNGQVPQTFEELESLAGVGRKTANVVLSVAFGV---------------- 133
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R++ RLG + TP + K L +P+
Sbjct: 134 --------------------PAIAVDTHVERVTKRLGICRWKDTPLEVEKTLMRKVPKEE 173
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
WS +H L+ FG+ CK++ P+C+ C LC +G+K + ++
Sbjct: 174 WSATHHRLIFFGRYHCKARTPNCDDCELLSLCREGQKRMRQK 215
>gi|448387918|ref|ZP_21564946.1| endonuclease III [Haloterrigena salina JCM 13891]
gi|445671310|gb|ELZ23902.1| endonuclease III [Haloterrigena salina JCM 13891]
Length = 227
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ + ED L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEKYDGAEDYADAPEDELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + ++ +P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSSCRTILEEHDGKVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-QRPEAIEQDLMGIVPEGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCSDCVLADICPSEKGD 216
>gi|452976633|gb|EME76448.1| endonuclease III [Bacillus sonorensis L12]
Length = 220
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 36/226 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + E+ + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKTLFQKYKKPEDYLAVPLEELQQDIKSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L + Y ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCKMLIEEYGGEVPRDRDELVKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +PES W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWKDSVTEVEKTLMKKIPESEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSP 373
S +H L+ FG+ CK+QRP CE C LC +G+K + + K P
Sbjct: 175 SATHHRLIFFGRYHCKAQRPKCEECPLFSLCREGQKRYKKGLVKLP 220
>gi|193083940|gb|ACF09617.1| endonuclease III [uncultured marine crenarchaeote AD1000-325-A12]
Length = 212
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q D++ + +L + + ++ N + +I G++ KA I
Sbjct: 29 FQLLIATILSAQCTDKIVNKTTKKLFKKYPNVSDLANADIRNVKNIIKSTGYYSLKANRI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K S LK NYN+ +P+ +E L L GVG K A++ ++ + GI
Sbjct: 89 KNTSKRLKNNYNSKVPDNMEDLLTLDGVGRKTANIVLSVGFNKNVGIA------------ 136
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S+RL TK PE +L LP+ LW
Sbjct: 137 -----------------------VDTHVIRLSNRLKLTK-NTNPEKIEIDLIKILPKELW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
++ + LL+ G+ IC++++P C C+ DLCP K+ L
Sbjct: 173 NKFSILLILHGRNICQAKKPDCSNCVLNDLCPYAKEIL 210
>gi|448318656|ref|ZP_21508170.1| endonuclease III [Natronococcus jeotgali DSM 18795]
gi|445598250|gb|ELY52313.1| endonuclease III [Natronococcus jeotgali DSM 18795]
Length = 227
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 40/224 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE +A L E E+ E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFEKYDGPEDYAAVDEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + ++ ++P+T+ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSTCETILEEHDGEVPDTMAELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ + PE +EL +PE
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEEER-PEAIERELMEIVPEEY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ----GKKELA 366
W HL + G+ C ++ P C+ C+ D+CP G+ +LA
Sbjct: 179 WQGFTHLCIDHGRATCTARSPDCDDCVLADICPSERGDGEVDLA 222
>gi|311741056|ref|ZP_07714881.1| endonuclease III [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303858|gb|EFQ79936.1| endonuclease III [Corynebacterium pseudogenitalium ATCC 33035]
Length = 218
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 37/214 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LI+ +LS+Q DE ++ L + L ++ P+GF + KA H+
Sbjct: 40 QLLIATVLSAQCTDERVNSVTPELFARYPEAADYAAAQRSDLESILRPLGFQRAKAGHLL 99
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ L ++ ++P T++ L LPGVG K A + + +A+GI
Sbjct: 100 GIGEKLVADFQGEVPRTVKELTSLPGVGRKTALVVLGNAFGI------------------ 141
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
P L VD H R+ RLG T KTP +++ +PE W+
Sbjct: 142 ------------------PGLTVDTHFGRLMQRLGLTGE-KTPVKIERDIAKLVPEEEWT 182
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+H ++ G+Q+C ++ P CE C+ +D+CP +
Sbjct: 183 MFSHRVIFHGRQVCHARTPECEACVLRDMCPAAR 216
>gi|375308945|ref|ZP_09774226.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Paenibacillus sp. Aloe-11]
gi|375078254|gb|EHS56481.1| endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[Paenibacillus sp. Aloe-11]
Length = 224
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 36/231 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D++ + L + + E+ + L + I +G ++ KAKHI
Sbjct: 30 FELTIAVLLSAQCSDQMVNKVTADLFQKYKSPEDYLAVPIEELEQDIRRIGLYRNKAKHI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL Y +IP+ + L KLPGVG K A++ ++ A+ +
Sbjct: 90 HNLCRILIDQYGGEIPSEHDQLIKLPGVGRKTANVVVSTAFNV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + K+L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGFAGWDDSVLEVEKKLMKRVPRDEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
S +H L+ FG+ CK+Q P C+ C D+C +GKK + + + K+R++
Sbjct: 174 SLTHHRLIFFGRYHCKAQNPQCQVCPLLDVCREGKKRMKTSLIRKDKERRA 224
>gi|417002349|ref|ZP_11941738.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479490|gb|EGC82586.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+Q+ D VN + T E + I VG +K KAK+
Sbjct: 16 FELLVATILSAQSTDVRVNKVTKVMFADMN-TPEEFAKADIKTIENYIRTVGIYKNKAKN 74
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I S IL +YN+++P I+ L KLPGVG K A++ ++A+GI
Sbjct: 75 ISATSKILYNDYNSEVPADIKELMKLPGVGRKTANVVASNAFGI---------------- 118
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+++RLG K E T +L +P+
Sbjct: 119 --------------------PAIAVDTHVFRVANRLGLASA-KNVEKTEDQLMKNIPKER 157
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + +H L+ G+ ICK++ P CE C K C ++E
Sbjct: 158 WRKTHHQLITHGRAICKARNPLCEECNMKITCEYYRRE 195
>gi|254413081|ref|ZP_05026853.1| endonuclease III [Coleofasciculus chthonoplastes PCC 7420]
gi|196180245|gb|EDX75237.1| endonuclease III [Coleofasciculus chthonoplastes PCC 7420]
Length = 219
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L I +VL L+ P GF++ KAK+I+
Sbjct: 39 QLLVATILSAQCTDERVNQVTPELFRQFPNARAIAQADIEVLEALVRPTGFYRNKAKNIQ 98
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A ++ + IP IELL KLPGV K A++ + +A+ I G+
Sbjct: 99 GACRMIVAEFGGQIPRRIELLIKLPGVARKTANVVLANAFDIHEGVT------------- 145
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R++ RLG T+ P ++L LP W
Sbjct: 146 ----------------------VDTHVKRLTQRLGLTE-HSDPIRIERDLMRLLPMEDWE 182
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
+ L+ G+ IC++++P C+ CL DLCP + E
Sbjct: 183 NWSIRLIYHGRAICQAKKPKCDACLLADLCPSARIE 218
>gi|298675712|ref|YP_003727462.1| endonuclease III [Methanohalobium evestigatum Z-7303]
gi|298288700|gb|ADI74666.1| endonuclease III [Methanohalobium evestigatum Z-7303]
Length = 212
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 38/216 (17%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+Q D +VN K++ ++++ N L K I GF+K KAK+
Sbjct: 33 FQLLIATILSAQATDTQVNRVTEHLFKKYPY-VDDLANADIKELEKDIYSTGFYKNKAKN 91
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + ++K +N+ +P+ + + +L GVG K A++ ++ +G+ GI
Sbjct: 92 IKKCAQMIKSQFNSKVPDNMNDMMELSGVGRKTANIVLSRGFGVHEGIA----------- 140
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ KTPE ++L +
Sbjct: 141 ------------------------VDTHVKRLSQRLGLTQN-KTPEKIEQDLMKLADKRD 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W ++ +L+ G++IC ++ P CE C+ LCP +
Sbjct: 176 WDTLSLILILHGRKICHAKNPECENCVVNTLCPSSR 211
>gi|347549293|ref|YP_004855621.1| endonuclease III [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982364|emb|CBW86358.1| Putative endonuclease III (DNA repair) [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 219
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + + L E E+ S D L I +G ++ KAK+I
Sbjct: 31 FELLVAVVLSAQCTDVLVNRVTASLFEKYHKPEDYLAVSLDELMDDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S L +N ++P T L LPGVG K A++ ++ +G
Sbjct: 91 QGLSQKLLTEFNGEVPQTHAELESLPGVGRKTANVVLSVGFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV RIS RLG + + + + L+ LPE LW
Sbjct: 133 ------------------VPAIAVDTHVERISKRLGICRRKDSVVEVEETLKRKLPEELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
S+ +H ++ FG+ CK++ P C TC LC +GKK+
Sbjct: 175 SDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQ 211
>gi|353327903|ref|ZP_08970230.1| endonuclease III [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
Length = 215
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS++T D + L T E + N + L K I +G + +KAK+I
Sbjct: 30 FTLLVAIVLSARTTDISVNKITKELFSIADTPEKMLNLGQSELRKCISSIGLYNSKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN+ +P + L LPGVG K A++ +N GI
Sbjct: 90 IGLSKILIERYNSKVPTNFDDLVSLPGVGRKSANVFLNSGLGI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+S+R+G K K T + L + +P+
Sbjct: 133 -------------------PTLAVDTHVFRVSNRVGLVKE-KDVLKTEQSLLNVVPKKYL 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H LV G+ +CK+Q+PSCETC+ DLC
Sbjct: 173 LYAHHWLVLHGRYVCKAQKPSCETCIIHDLC 203
>gi|384179579|ref|YP_005565341.1| endonuclease III [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324325663|gb|ADY20923.1| endonuclease III [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 215
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAFCRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 SVTHHRMIFFGRYHCKAQRPQCEECPLLEVCREGKKRM 212
>gi|318060850|ref|ZP_07979573.1| putative endonuclease III [Streptomyces sp. SA3_actG]
gi|318080069|ref|ZP_07987401.1| putative endonuclease III [Streptomyces sp. SA3_actF]
Length = 247
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D VN ++ T E++ + L +LI P GF++ KA+
Sbjct: 29 FQLLVATVLSAQTTDLRVNQTTPALFAKYP-TPEDMAAAVPEELEELIRPTGFFRAKARS 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ S L+ +++ ++P T++ L KLPGVG K A + + +A+G
Sbjct: 88 LLGLSAALRDDFDGEVPATVDALVKLPGVGRKTAFVVLGNAFG----------------- 130
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD H R++ R WT + P ++ + S
Sbjct: 131 -------------------VPGITVDTHFGRLARRWKWTTS-EDPVKVESDVAAIFEPSE 170
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W+ ++H ++ G++IC S+RP+C C LCP
Sbjct: 171 WTMLSHRVIFHGRRICHSRRPACGACPVAPLCPS 204
>gi|435852528|ref|YP_007314114.1| endonuclease III [Methanomethylovorans hollandica DSM 15978]
gi|433663158|gb|AGB50584.1| endonuclease III [Methanomethylovorans hollandica DSM 15978]
Length = 217
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 38/214 (17%)
Query: 150 VLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q D +VN K + T+E+ GK I GF+ KAKHI
Sbjct: 40 LLVATILSAQCTDRQVNQVTQSLFKRYR-TLEDYAAADVSAFGKEIYSTGFYHQKAKHII 98
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
++ I+ ++ +P+T+E L +LPGVG K A++ ++ A+G + GI
Sbjct: 99 ESARIMLTDFGGKVPDTMEDLLQLPGVGRKTANIVLSRAFGKIEGIA------------- 145
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S+RLG+T+ + PE K+L
Sbjct: 146 ----------------------VDTHVKRLSNRLGFTQ-HEDPEKIEKDLMRIAKREDLE 182
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
++ L+ G+ +C ++ P C C+ K+LCP +
Sbjct: 183 TLSMTLILHGRNVCMARNPKCVECVVKELCPSSR 216
>gi|373457007|ref|ZP_09548774.1| endonuclease III [Caldithrix abyssi DSM 13497]
gi|371718671|gb|EHO40442.1| endonuclease III [Caldithrix abyssi DSM 13497]
Length = 231
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS ML++Q+ D+ + +L + ++ SE+ + + I VG +K KAK+I
Sbjct: 40 FQLLISTMLAAQSTDKRVNIVTEKLFKDYPDAASMRRMSEEQIREYIKTVGLYKAKAKNI 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S+IL + Y DIP T E L LPGVG K A++ ++ A
Sbjct: 100 LNVSEILDEKYGGDIPATREELMALPGVGRKTANVVLSIA-------------------- 139
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K +P + VD HV R+S+R+G + K +T K+L +P+ W
Sbjct: 140 ----------------KNVPAIAVDTHVFRVSNRIGLARA-KDVLNTEKQLMESIPKEKW 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
S+ +H L+ G++IC+++ P C C +C
Sbjct: 183 SQAHHWLIWHGRKICRARNPLCTECPLNRIC 213
>gi|222479385|ref|YP_002565622.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
gi|222452287|gb|ACM56552.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
Length = 227
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E+ N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYETPEDYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L +L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEQHDGEVPDTMSELTELAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RI+ RL T+ ++P+ ++L +PE
Sbjct: 143 -----------------------VVDTHVQRITRRLAITE-EESPKKIEQDLLDVVPEED 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C+ D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCGDCVLADVCPSEKAD 216
>gi|415719736|ref|ZP_11467775.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis 1500E]
gi|388058996|gb|EIK81763.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis 1500E]
Length = 223
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 42/220 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+QT D+ ++ L + ++ S + +I P+GF++ KA+HI
Sbjct: 36 FELLIATVLSAQTTDKRVNSVTPELFDTFPDSRSLSAASVKQVESIIKPLGFYRVKAQHI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ +++ +P+ +E L LPGVG K A++ +A+G+
Sbjct: 96 IALSVRLESDFHGVVPSRMEDLTSLPGVGRKTANVVRGNAFGL----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW------TKVFKTPEDTRKELESW 321
P VD HV R++ RLGW K + PE KE+ S+
Sbjct: 139 -------------------PGFPVDTHVIRVTGRLGWRRDCNKPKKYANPESIEKEITSY 179
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ W+ ++H L+ G++IC ++ P C +C K CP
Sbjct: 180 FDPADWTNLSHRLILHGRKICTARNPRCASCPLKTTCPSS 219
>gi|363893835|ref|ZP_09320929.1| endonuclease III [Eubacteriaceae bacterium ACC19a]
gi|361963337|gb|EHL16415.1| endonuclease III [Eubacteriaceae bacterium ACC19a]
Length = 212
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 45/225 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH- 206
Y +L++ +LS+Q+ D+ + L + T E + N E+ L + I +GF+ TK+K+
Sbjct: 28 YELLVATILSAQSTDKRVNIVTKDLFKVADTPEKMVNLGEEKLKEYIRTIGFFNTKSKNL 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I M+ D+++K YN+ +P T+E L L GVG K A++ M++ +
Sbjct: 88 ISMSRDLIQK-YNSKVPKTMEELTSLAGVGRKTANVVMSNCF------------------ 128
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESWLP 323
K+P + VD HV R++HRLG++K V+K D +K++
Sbjct: 129 ------------------KVPAIAVDTHVFRLAHRLGFSKEEDVYKVELDLQKKI----A 166
Query: 324 ESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+ W+ +H+L+ G+ CK++ P CE C K+ C K L ++
Sbjct: 167 KKDWTLAHHMLIFHGRYTCKAKNPLCEKCNLKEYCLYYKDILKKK 211
>gi|58696904|ref|ZP_00372410.1| endonuclease III [Wolbachia endosymbiont of Drosophila simulans]
gi|225630400|ref|YP_002727191.1| endonuclease III [Wolbachia sp. wRi]
gi|58536872|gb|EAL60070.1| endonuclease III [Wolbachia endosymbiont of Drosophila simulans]
gi|225592381|gb|ACN95400.1| endonuclease III [Wolbachia sp. wRi]
Length = 212
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 43/214 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS++T D + L T E + + + L K I +G + +KAK+I
Sbjct: 30 FTLLVAIVLSARTTDISVNKITKELFSITDTPEKMLSFGQSELRKCISSIGLYNSKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN+ +P + L LPGVG K A++ +N GI
Sbjct: 90 IGLSKILIERYNSKVPTDFDDLVSLPGVGRKSANVFLNSGLGI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESWLPE 324
P L VD HV R+S+R+G K VFKT + L + +P+
Sbjct: 133 -------------------PTLAVDTHVFRVSNRIGLVKEKDVFKT----EQSLLNVVPK 169
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H LV G+ +CK+Q+PSCETC+ DLC
Sbjct: 170 KYLLYAHHWLVLHGRYVCKAQKPSCETCIIHDLC 203
>gi|373107960|ref|ZP_09522251.1| endonuclease III [Stomatobaculum longum]
gi|371650126|gb|EHO15594.1| endonuclease III [Stomatobaculum longum]
Length = 212
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D + L +H +E+I S++ + + I GF+ KA+++
Sbjct: 33 WKLLLATILSAQCTDARVNQVTKVLYQHYPRLEDIAAASQEEIEREIYTTGFYHNKARNL 92
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + +L ++ +P+ +E L LPGVG K A+L + +G
Sbjct: 93 RACAQVLLLRFDGTVPDEMEALLTLPGVGRKTANLILGEIYGK----------------- 135
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG P EL++ LPES W
Sbjct: 136 -------------------PSIVVDTHVKRVSRRLGLVTA-TDPTKVEAELKTVLPESFW 175
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
N L+ G+ C ++ P+C C DLCP+
Sbjct: 176 ILWNTRLMALGRTYCTAKAPNCADCYLSDLCPR 208
>gi|407978795|ref|ZP_11159622.1| endonuclease III [Bacillus sp. HYC-10]
gi|407414666|gb|EKF36301.1| endonuclease III [Bacillus sp. HYC-10]
Length = 220
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKHLFQKYKTPEDYVSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L + Y ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLSKMLIEEYGGEVPRDRDELMKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEQTLMKKVPKEDW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+QRP CE+C D+C +G+K L
Sbjct: 175 SVTHHRLIFFGRYHCKAQRPQCESCPLLDMCREGQKRL 212
>gi|269122255|ref|YP_003310432.1| endonuclease III [Sebaldella termitidis ATCC 33386]
gi|268616133|gb|ACZ10501.1| endonuclease III [Sebaldella termitidis ATCC 33386]
Length = 219
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+++LS+Q D + L + +++ + K I GF+K KAK+I
Sbjct: 31 YQLLIAVILSAQCTDVRVNIVTKELFKIVKGPKDLAEMDLKEIEKHIRSTGFYKNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+M S L + YN ++PNT+E L L GVG K A++ + W I GI
Sbjct: 91 QMCSRQLLEKYNGEVPNTMEELRGLAGVGRKTANVVLGDIWNIREGI------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S+R+G+ K PE KEL ++P+ W
Sbjct: 138 ----------------------VVDTHVKRLSNRIGFVKS-DNPEIIEKELMKFIPKKHW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKS 372
E +H L+ G+ C +++P CE C K+ C + L + +KS
Sbjct: 175 FEYSHYLILHGRDKCIARKPKCEICEIKEYCKYYETNLKKNKEKS 219
>gi|434394083|ref|YP_007129030.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Gloeocapsa sp. PCC 7428]
gi|428265924|gb|AFZ31870.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Gloeocapsa sp. PCC 7428]
Length = 243
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L I N + +I P GF++ KAK+I+
Sbjct: 46 QLLVATILSAQCTDERVNQVTPELFRRFPDAVAIANADLTEIETIIRPTGFYRNKAKNIQ 105
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A IL + Y ++P +E L LPGV K A++ + HA+ I G+
Sbjct: 106 AACRILVQEYGGNVPARMEKLLTLPGVARKTANVVLAHAYDIHVGVT------------- 152
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S+RLG TK P ++L LP+ W
Sbjct: 153 ----------------------VDTHVKRLSYRLGLTK-HTDPLHIERDLMRLLPQEDWE 189
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ L+ G+ ICK++ P C+ C+ DLCP
Sbjct: 190 NWSIRLIYHGRAICKARNPLCDACVLADLCPSA 222
>gi|402829196|ref|ZP_10878072.1| endonuclease III [Slackia sp. CM382]
gi|402284177|gb|EJU32680.1| endonuclease III [Slackia sp. CM382]
Length = 276
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q D + L + N + ++I P+GF++TKAK I
Sbjct: 94 FTLTIAVVLSAQCTDAAVNKVTPILFAEFPDAYALANAPLARIEEIIHPLGFFRTKAKKI 153
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + ++ +P T++ L +LPGVG K A++ M A+ GI
Sbjct: 154 IGCAQTVVSDFGGVVPRTMDELTRLPGVGRKTANVVMAQAFRDAQGIA------------ 201
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESL 326
VD HV RI+HRLG+ T+ TPE +L P+
Sbjct: 202 -----------------------VDTHVFRIAHRLGFATRNDDTPEKVESKLLRIYPKPD 238
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W +NH V FG++ C+++ P C C D+CP
Sbjct: 239 WLFINHQWVHFGREFCQARNPRCAECFVADVCP 271
>gi|423481533|ref|ZP_17458223.1| endonuclease III [Bacillus cereus BAG6X1-2]
gi|401144741|gb|EJQ52268.1| endonuclease III [Bacillus cereus BAG6X1-2]
Length = 215
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L +YN +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLSRMLLDDYNGKVPEDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYYCKAQRPQCEECRLLEICREGKKRM 212
>gi|403380710|ref|ZP_10922767.1| hypothetical protein PJC66_12927 [Paenibacillus sp. JC66]
Length = 225
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 41/231 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q DE + L + E+ L + I +G ++ KAK+I
Sbjct: 30 FELTIAVLLSAQCTDETVNKVTADLFQKYRKPEDYLAVPLSELEQDIRRIGLYRNKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ Y +IP E L +LPGVG K A++ +++A+ +
Sbjct: 90 QSLCAMILDKYGGEIPREHEQLVELPGVGRKTANVVVSNAFDV----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG K+ + + K L +P W
Sbjct: 133 -------------------PAIAVDTHVERVSKRLGLAKLKDSVLEVEKSLMKKVPREEW 173
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
++ +H L+ FG+ CK+Q P CE C D+C +GKK + KS K RK+
Sbjct: 174 TQTHHRLIFFGRYHCKAQNPRCEICPLLDICREGKKRM-----KSGKNRKA 219
>gi|229160597|ref|ZP_04288592.1| endonuclease III [Bacillus cereus R309803]
gi|228623007|gb|EEK79838.1| endonuclease III [Bacillus cereus R309803]
Length = 215
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S +L +YN ++P + L KLPGVG K A++ + A+G+
Sbjct: 91 QKLSQMLLDDYNGEVPRDRDELTKLPGVGRKTANVVASVAFGM----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 SVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|433444864|ref|ZP_20409606.1| endonuclease III [Anoxybacillus flavithermus TNO-09.006]
gi|432001404|gb|ELK22282.1| endonuclease III [Anoxybacillus flavithermus TNO-09.006]
Length = 216
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + +L E T E+ + + L + I +G ++ KAK+I
Sbjct: 31 FELLIAVVLSAQCTDALVNKVTKQLFEKYKTPEDYVSVPLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + YN ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QQLCRILIEQYNGEVPKNRDELMKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEETLMKKIPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+Q P C+ C LC +GKK +
Sbjct: 175 SVTHHRLIFFGRYHCKAQSPKCDVCPLLHLCREGKKRM 212
>gi|292655011|ref|YP_003534908.1| endonuclease III [Haloferax volcanii DS2]
gi|433423640|ref|ZP_20406270.1| endonuclease III [Haloferax sp. BAB2207]
gi|448292772|ref|ZP_21483093.1| endonuclease III [Haloferax volcanii DS2]
gi|448572172|ref|ZP_21640165.1| endonuclease III [Haloferax lucentense DSM 14919]
gi|448596898|ref|ZP_21654036.1| endonuclease III [Haloferax alexandrinus JCM 10717]
gi|291372240|gb|ADE04467.1| endonuclease III [Haloferax volcanii DS2]
gi|432198310|gb|ELK54607.1| endonuclease III [Haloferax sp. BAB2207]
gi|445571747|gb|ELY26290.1| endonuclease III [Haloferax volcanii DS2]
gi|445720764|gb|ELZ72435.1| endonuclease III [Haloferax lucentense DSM 14919]
gi|445740779|gb|ELZ92284.1| endonuclease III [Haloferax alexandrinus JCM 10717]
Length = 227
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI++MLS+Q DE + L E + ++ L I + ++ KAK+
Sbjct: 35 RLELLIAVMLSAQCTDERVNKVTAELFEKYDDAADYAAADQEELADDISSITYYNNKAKY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
I+ A +DI++K ++ ++P+T+ L L GVG K A++ + H IV GI
Sbjct: 95 IRSACADIIEK-HDGEVPDTMSALTDLAGVGRKTANVVLQHGHDIVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T+ ++L +PE
Sbjct: 143 ------------------------VVDTHVQRLSRRLGLTEEEYPER-IEEDLMPVVPER 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ +C ++ P C+ C+ +DLCP K++
Sbjct: 178 DWQQFTHLFISHGRAVCDARNPDCDACVLEDLCPSSKRD 216
>gi|255324181|ref|ZP_05365303.1| endonuclease III [Corynebacterium tuberculostearicum SK141]
gi|255298697|gb|EET77992.1| endonuclease III [Corynebacterium tuberculostearicum SK141]
Length = 218
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LI+ +LS+Q DE ++ L + + L +++ P+GF + KA H+
Sbjct: 40 QLLIATVLSAQCTDERVNSVTPELFSRYPEAADYASAQRSDLERILRPLGFQRAKAGHLL 99
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
+ L ++ ++P T++ L LPGVG K A + + +A+GI
Sbjct: 100 GIGEKLVADFQGEVPRTVKELTSLPGVGRKTALVVLGNAFGI------------------ 141
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
P L VD H R+ RLG + KTP +++ +PE W+
Sbjct: 142 ------------------PGLTVDTHFSRLMQRLGLSGE-KTPVKIERDIAKLVPEEEWT 182
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+H ++ G+Q+C ++ P C+ C+ +D+CP +
Sbjct: 183 MFSHRVIFHGRQVCHARTPECDACVLRDMCPAAR 216
>gi|374302076|ref|YP_005053715.1| endonuclease III [Desulfovibrio africanus str. Walvis Bay]
gi|332555012|gb|EGJ52056.1| endonuclease III [Desulfovibrio africanus str. Walvis Bay]
Length = 219
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++++ +L++Q DE + L + S+ L ++I GF++ KAK++
Sbjct: 36 WQLMVATVLAAQCTDERVNQVTPELFRRWPGPAELRQASQAELEEVIRSTGFFRNKAKNL 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A++++ + ++P T+ + ++PGV K A++ ++ A G+V GI
Sbjct: 96 LAAANLVMDKHGGEMPRTMAEMIEIPGVARKTANIVLSTALGVVEGIA------------ 143
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T+ K PE ++L +W
Sbjct: 144 -----------------------VDTHVKRLSFRLGLTESDK-PERIERDLMEAFEREIW 179
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
EVNHLLV G+ +C+++ P C CL D+CP+
Sbjct: 180 GEVNHLLVQHGRAVCQARLPRCSVCLLADVCPK 212
>gi|443321823|ref|ZP_21050863.1| DNA-(apurinic or apyrimidinic site) lyase [Gloeocapsa sp. PCC
73106]
gi|442788439|gb|ELR98132.1| DNA-(apurinic or apyrimidinic site) lyase [Gloeocapsa sp. PCC
73106]
Length = 219
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 38/218 (17%)
Query: 149 HVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+L++ +LS+Q DE VN K + ++ N + L LI GF++ KAKHI
Sbjct: 39 QLLVATILSAQCTDERVNKVTPALFKRFPDAL-SLANADVEELQDLIRSTGFYRNKAKHI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ A + ++ +P T+ L LPGV K A++ + H +G++ G+
Sbjct: 98 QGACQKIMSDFAGFVPQTMAELLTLPGVARKTANVVLAHGFGVIVGVT------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG TK K P ++L + LP+ W
Sbjct: 146 -----------------------VDTHVKRLSQRLGLTK-HKEPLKIERDLMALLPQPEW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+ L+ G+ IC++++P C C+ ++CP + E+
Sbjct: 182 ENFSIHLIYHGRAICQARKPDCNNCVLFNICPSSQHEI 219
>gi|390449495|ref|ZP_10235100.1| endonuclease III [Nitratireductor aquibiodomus RA22]
gi|389663992|gb|EIM75503.1| endonuclease III [Nitratireductor aquibiodomus RA22]
Length = 246
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 37/219 (16%)
Query: 145 VRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
V + +L++++LS+Q D + A L + T E + E +G+ I +G W+ KA
Sbjct: 50 VNAFTLLVAVVLSAQATDAGVNKATRDLFKVADTPEKMLALGEQKVGEYIRTIGLWRNKA 109
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K++ S+ L +++ + +P++ E L LPGVG K A++ +N ++G
Sbjct: 110 KNVIALSEALIRDHGSQVPDSREALVTLPGVGRKTANVVLNMSFG--------------- 154
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
P + VD H+ RI +R+G KTPE L +P
Sbjct: 155 ---------------------QPTMAVDTHILRIGNRIGLAP-GKTPEQVEDTLVKIIPA 192
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+H L+ G+ +CK+++P C C+ D+C +K
Sbjct: 193 EFMRHAHHWLILHGRYVCKARKPDCPACVIADICKSAEK 231
>gi|20092809|ref|NP_618884.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918109|gb|AAM07364.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 256
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 38/213 (17%)
Query: 150 VLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LI+ +LS+Q+ D ++N K++ T E+ L I GF+K KAK+IK
Sbjct: 75 LLIATVLSAQSTDVQINRVTENLFKKYR-TAEDYAGADIRELEIDIYSTGFYKNKAKNIK 133
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A+ ++ + + ++P T++ L LPGVG K A++ + A+G++ GI
Sbjct: 134 AAAQMIVERFGGEVPKTMKELVTLPGVGRKTANIVLARAFGVIEGIA------------- 180
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG+T+ PE ++L + +
Sbjct: 181 ----------------------VDTHVKRVSRRLGFTR-HSDPEKIEQDLITLARKEDLD 217
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
++ L+ G+++C++++P C C+ K+LCP
Sbjct: 218 SISMTLIYHGRKVCRARKPRCYVCVVKELCPSS 250
>gi|334137758|ref|ZP_08511184.1| endonuclease III [Paenibacillus sp. HGF7]
gi|333604599|gb|EGL15987.1| endonuclease III [Paenibacillus sp. HGF7]
Length = 209
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q DE + L + T E+ + L + I +G ++ KAK+I
Sbjct: 29 FELTIAVLLSAQCTDETVNKVTQTLFQKYKTPEDYLAVPLEELEQDIRRIGLYRNKAKNI 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ + Y+ IP T E L +LPGVG K A++ +++A+G+
Sbjct: 89 QKLCQLVLERYDGQIPTTHEQLVELPGVGRKTANVVVSNAFGV----------------- 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + K+L +P W
Sbjct: 132 -------------------PAIAVDTHVERVSKRLGLAGKDDSVLEVEKKLMRKVPREEW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
+ +H L+ FG+ CK+Q P C+ C D+CP+GK
Sbjct: 173 TLTHHRLIFFGRYHCKAQSPKCDICPLLDICPEGK 207
>gi|67923355|ref|ZP_00516836.1| Endonuclease III/Nth [Crocosphaera watsonii WH 8501]
gi|416397193|ref|ZP_11686587.1| Endonuclease III [Crocosphaera watsonii WH 0003]
gi|67854780|gb|EAM50058.1| Endonuclease III/Nth [Crocosphaera watsonii WH 8501]
gi|357262807|gb|EHJ11891.1| Endonuclease III [Crocosphaera watsonii WH 0003]
Length = 211
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L + N + L LI GF++ KAK+I+
Sbjct: 34 QLLVATILSAQCTDERVNKVTPELFARFPDAIALANADRETLETLIRSTGFYRNKAKNIQ 93
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + K++N +P T+E L L GV K A++ + HA+GI G+
Sbjct: 94 GACQKIVKDFNGKVPQTMEELLLLSGVARKTANVVLAHAFGINAGVT------------- 140
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG TK P K+L LP+ W
Sbjct: 141 ----------------------VDTHVKRLSQRLGLTKA-TDPVKIEKDLMPLLPQKDWE 177
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ ++ G+QICK+++P+C+ C LCP
Sbjct: 178 NFSIRIIYHGRQICKARKPNCQDCQLAFLCP 208
>gi|229828278|ref|ZP_04454347.1| hypothetical protein GCWU000342_00336 [Shuttleworthia satelles DSM
14600]
gi|229792872|gb|EEP28986.1| hypothetical protein GCWU000342_00336 [Shuttleworthia satelles DSM
14600]
Length = 300
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 138/340 (40%), Gaps = 67/340 (19%)
Query: 32 YDEPKFQQTRCQLEKNIALNNPL-DDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHN 90
++ + Q + ++EK I + D++ + KK T KS+ LGKR K+ H
Sbjct: 18 WEAAQTQMKQIRIEKTIIKRAYMRADQDAKRQGEEIKKGTKEKSQGLGKR----KKADHK 73
Query: 91 KDPIPDENDTKKTKWEPA-----HWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEV 145
K+ P + + E A K + + R DA
Sbjct: 74 KELTPAQKRDLDRRRELALTCIDRLKRIYPDTRTTLTFADA------------------- 114
Query: 146 RRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAK 205
+ +LISL L++Q D+ L T+E I + + K++ P G +KA+
Sbjct: 115 --WQLLISLRLAAQCTDKRVDQVTPGLYAVYPTVEAISQAPVEAIEKIVHPCGLGPSKAR 172
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
IK +L + Y + +P+T+E L +LPGVG K A+L + +G
Sbjct: 173 DIKACMTMLHEVYQDRVPDTMEELLRLPGVGRKSANLILGDVFG---------------- 216
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
P + D H R+S+R+G K P KEL LP++
Sbjct: 217 --------------------KPAVVTDTHCIRLSNRIGLVTDIKEPAKVEKELWKVLPDA 256
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
++ H LV G+ +C ++ P CE C+ D+C G+ L
Sbjct: 257 EANQFCHRLVDHGRAVCMARSPRCEACILNDVCAFGQTVL 296
>gi|408679058|ref|YP_006878885.1| Endonuclease III [Streptomyces venezuelae ATCC 10712]
gi|328883387|emb|CCA56626.1| Endonuclease III [Streptomyces venezuelae ATCC 10712]
Length = 310
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 135/313 (43%), Gaps = 56/313 (17%)
Query: 51 NNPLDDKEHNDNKTQNKKNTLYKSEKLGKRTLLKKQNVHNKDPIPDENDTKKTKWEPAHW 110
N+P+ + + + N+ +G+ + K+ N+ TK K PA
Sbjct: 3 NSPVRAQAKGAERVSGEGNS-----AVGEHGVSKQAKAANRKRTEPAKPTKSVK--PAKP 55
Query: 111 KEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEV---RRYHVLISLMLSSQTKD-EVNH 166
+ L +R RK + + H PE+ + +L++ +LS+QT D VN
Sbjct: 56 ESRLGMVRRARKINRELAEVYPYAH-------PELDFRNPFELLVATVLSAQTTDLRVNQ 108
Query: 167 AAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTI 226
++ T E++ + + +LI P GF++ K K I + L+ +++ ++P +
Sbjct: 109 TTPALFAKY-PTPEDLAAAVPEEVEELIRPTGFFRAKTKSIMGLATALRDDFDGEVPGRL 167
Query: 227 ELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKI 286
+ L KLPGVG K A + + +A+G +
Sbjct: 168 DDLVKLPGVGRKTAFVVLGNAFG------------------------------------V 191
Query: 287 PQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQR 346
P + VD H R++ R WT+ P E+ + P+S W+ ++H ++ G++IC +++
Sbjct: 192 PGITVDTHFMRLARRWKWTES-DDPVKIEAEVATIFPKSEWTMLSHRVIFHGRRICHARK 250
Query: 347 PSCETCLNKDLCP 359
P+C C LCP
Sbjct: 251 PACGACPIAHLCP 263
>gi|58698597|ref|ZP_00373495.1| endonuclease III [Wolbachia endosymbiont of Drosophila ananassae]
gi|58534893|gb|EAL58994.1| endonuclease III [Wolbachia endosymbiont of Drosophila ananassae]
Length = 205
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 43/214 (20%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS++T D + L T E + + + L K I +G + +KAK+I
Sbjct: 23 FTLLVAIVLSARTTDISVNKITKELFSITDTPEKMLSFGQSELRKCISSIGLYNSKAKNI 82
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN+ +P + L LPGVG K A++ +N GI
Sbjct: 83 IGLSKILIERYNSKVPTDFDDLVSLPGVGRKSANVFLNSGLGI----------------- 125
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK---VFKTPEDTRKELESWLPE 324
P L VD HV R+S+R+G K VFKT + L + +P+
Sbjct: 126 -------------------PTLAVDTHVFRVSNRIGLVKEKDVFKT----EQSLLNVVPK 162
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H LV G+ +CK+Q+PSCETC+ DLC
Sbjct: 163 KYLLYAHHWLVLHGRYVCKAQKPSCETCIIHDLC 196
>gi|422422604|ref|ZP_16499557.1| endonuclease III [Listeria seeligeri FSL S4-171]
gi|313637221|gb|EFS02735.1| endonuclease III [Listeria seeligeri FSL S4-171]
Length = 232
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + + L E E+ S D L I +G ++ KAK+I
Sbjct: 44 FELLVAVVLSAQCTDVLVNRVTASLFEKYHRPEDYLAVSLDELMDDIRSIGLYRNKAKNI 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S L +N ++P T L LPGVG K A++ ++ +G+
Sbjct: 104 QGLSQKLLTEFNGEVPQTHAELESLPGVGRKTANVVLSVGFGV----------------- 146
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG + + + + L+ LPE LW
Sbjct: 147 -------------------PAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELW 187
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
S+ +H ++ FG+ CK++ P C TC LC +GKK+
Sbjct: 188 SDAHHYMIFFGRYHCKARNPDCPTCPLLYLCREGKKQ 224
>gi|422419516|ref|ZP_16496471.1| endonuclease III [Listeria seeligeri FSL N1-067]
gi|313632665|gb|EFR99642.1| endonuclease III [Listeria seeligeri FSL N1-067]
Length = 232
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + + L E E+ S D L I +G ++ KAK+I
Sbjct: 44 FELLVAVVLSAQCTDVLVNRVTASLFEKYHRPEDYLAVSLDELMDDIRSIGLYRNKAKNI 103
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S L +N ++P T L LPGVG K A++ ++ +G+
Sbjct: 104 QGLSQKLLTEFNGEVPQTHAELESLPGVGRKTANVVLSVGFGV----------------- 146
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG + + + + L+ LPE LW
Sbjct: 147 -------------------PAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELW 187
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
S+ +H ++ FG+ CK++ P C TC LC +GKK+
Sbjct: 188 SDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQ 224
>gi|452207737|ref|YP_007487859.1| endonuclease III [Natronomonas moolapensis 8.8.11]
gi|452083837|emb|CCQ37164.1| endonuclease III [Natronomonas moolapensis 8.8.11]
Length = 227
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 36/216 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LIS++LS+Q DE ++ L + E L I + ++ KA +
Sbjct: 35 RLELLISVILSAQCTDERVNSVTADLFDAYDGPAAYAEADESELAAAIDSITYYNNKASY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 ITSACRDIVEIHDGEVPDTMSELTDLAGVGRKTANVVLQHGHEVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV RIS RLG T+ TPE +L +PE
Sbjct: 143 -----------------------VVDTHVQRISRRLGLTEE-HTPERIESDLMGVVPEGD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W E HLL+ G+ C ++ P C C+ +D+CP K
Sbjct: 179 WKEFTHLLISHGRDTCTARNPDCSNCVLEDICPSSK 214
>gi|21226997|ref|NP_632919.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905314|gb|AAM30591.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 234
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 42/214 (19%)
Query: 149 HVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDV--LGKLIIPVGFWKTKAK 205
+L++ +LS+Q+ D ++N K++ + S D+ L I GF+K+KAK
Sbjct: 52 ELLVATVLSAQSTDVQINKVTENLFKKYRTAWDY---ASADIRELEADIYSTGFYKSKAK 108
Query: 206 HIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+IK A+ ++ +NY ++P T+E L LPGVG K A++ + A+GI+ GI
Sbjct: 109 NIKAAAQLIIENYGGEVPQTMEELVTLPGVGRKTANIVLARAFGIIEGIA---------- 158
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV R+S RLG T+ P ++L S +
Sbjct: 159 -------------------------VDTHVKRVSGRLGLTR-NSDPVKIEQDLISLARKE 192
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
++ L+ G+++C++++P C C+ K+LCP
Sbjct: 193 DLDSISMTLIYHGRKVCQARKPRCSICVVKELCP 226
>gi|115374385|ref|ZP_01461668.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
gi|115368587|gb|EAU67539.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
Length = 195
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L++ +LS +T+DEV+ L T E + + + + LI V F + KA+ I
Sbjct: 13 FEQLVACILSIRTRDEVSLPTSLALLRRAHTPEAMSQLTPEEIEALIAQVTFPEPKARQI 72
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ + + +P E+L GVGPK AHL + A G
Sbjct: 73 HALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACG------------------ 114
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IS VD+HVHR+++R G+ + ++PE T K LE+ LP + W
Sbjct: 115 HEAIS------------------VDIHVHRVTNRWGYVRT-RSPEQTLKALEARLPRAYW 155
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
E+N LLV FG+ +C RP C C +C Q
Sbjct: 156 IEINRLLVPFGKHVCTGSRPQCSRCPVLAMCQQ 188
>gi|87311493|ref|ZP_01093612.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
gi|87285749|gb|EAQ77664.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
Length = 219
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +LI+ +LS+Q D + L T E I + KL+ GF++ KAK+I
Sbjct: 38 YQLLIATILSAQCTDIRVNIVTKELFAKYPTAEEIAALPIAKIEKLVQSTGFFRNKAKNI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K AS L Y+ +P ++ L LPGVG K A++ + A+GI TG+
Sbjct: 98 KAASQELVDAYDGQVPADLDALVALPGVGRKTANVVLGTAFGIPTGV------------- 144
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S R+G T + EL LP+ W
Sbjct: 145 ----------------------VVDTHVGRLSRRMGLTAQVDAVK-VESELIQLLPQKEW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+ +H ++ G+ IC +++P C+ C CPQ
Sbjct: 182 IQFSHRMIHHGRAICDARKPKCDQCHFMKFCPQ 214
>gi|86605614|ref|YP_474377.1| endonuclease III [Synechococcus sp. JA-3-3Ab]
gi|86554156|gb|ABC99114.1| endonuclease III [Synechococcus sp. JA-3-3Ab]
Length = 231
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 36/213 (16%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L + + + + LI P GF++ KAKHI+
Sbjct: 36 QLLVATILSAQCTDERVNQVTPELFRRFPDAQALAAAPREEIEALIRPTGFYRNKAKHIQ 95
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + ++ +P T+ L LPGV K A++ + HA+GI G+
Sbjct: 96 EACRKIVTDFGGQVPRTMPELLTLPGVARKTANVVLAHAFGINAGVT------------- 142
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG T+ + P ++L LP++ W
Sbjct: 143 ----------------------VDTHVKRLSRRLGLTE-HEDPVRIERDLMQLLPQADWE 179
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ L+ G+ IC +++P CE C DLCP
Sbjct: 180 NWSIRLIEHGRAICTARKPLCEQCFLADLCPSA 212
>gi|289435243|ref|YP_003465115.1| endonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171487|emb|CBH28031.1| endonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 219
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + + L E E+ S D L I +G ++ KAK+I
Sbjct: 31 FELLVAVVLSAQCTDVLVNRVTASLFEKYHRPEDYLTVSLDELMDDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S L +N ++P T L LPGVG K A++ ++ +G+
Sbjct: 91 QGLSQKLLTEFNGEVPQTHAELESLPGVGRKTANVVLSVGFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV RIS RLG + + + + L+ LPE LW
Sbjct: 134 -------------------PAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPEELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
S+ +H ++ FG+ CK++ P C TC LC +GKK+
Sbjct: 175 SDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQ 211
>gi|323142347|ref|ZP_08077179.1| endonuclease III [Phascolarctobacterium succinatutens YIT 12067]
gi|322413231|gb|EFY04118.1| endonuclease III [Phascolarctobacterium succinatutens YIT 12067]
Length = 211
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 37/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q DE + R+ T E + +++ + I G + KAK++
Sbjct: 30 FELLVAVILSAQCTDERVNVITARMFPRLNTPEKMGALTQEEMEAEIRDCGLYHAKAKNL 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L + +N+ IPN I+ L +LPGVG K A++ + + I
Sbjct: 90 LGMCHMLTQRFNSVIPNDIKTLMELPGVGQKTANVIASIIYNI----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+SHRLG + K P T KELE +P W
Sbjct: 133 -------------------PALAVDTHVFRVSHRLGLAQ-GKDPLATEKELEKIIPREKW 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S+ +H + G++ICK+++P C C+ + CP +K
Sbjct: 173 SDAHHWFIWHGRKICKARKPLCRGCVVVEECPFKEKNF 210
>gi|395646167|ref|ZP_10434027.1| endonuclease III [Methanofollis liminatans DSM 4140]
gi|395442907|gb|EJG07664.1| endonuclease III [Methanofollis liminatans DSM 4140]
Length = 218
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ VLI +LS+QT D A L T + E+ +G++I P GF++ KA+HI
Sbjct: 31 FEVLILTILSAQTTDRAVEAVRPILFSRYPTPAALAAADEEEVGEIIKPTGFYRVKARHI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +++ + +P T+E L LPGVG K A++ +++A+GI GI
Sbjct: 91 IGTARRIQEEHGGSVPRTMEALTGLPGVGRKTANIVLSNAFGIDEGI------------- 137
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV RI+ LG T P +L++ P+ +W
Sbjct: 138 ----------------------AVDTHVKRIAGLLGLTDE-TDPVKIESDLKALFPQEVW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC---PQGKK 363
++N LLV G+ +C + RP C C+ C +GKK
Sbjct: 175 GQINALLVQHGRAVCIAGRPRCAACMLTPWCRYYSEGKK 213
>gi|315924136|ref|ZP_07920362.1| endonuclease III [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622538|gb|EFV02493.1| endonuclease III [Pseudoramibacter alactolyticus ATCC 23263]
Length = 231
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 39/219 (17%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ MLS+Q D VN KEH T E I + E L + I G TKAK+
Sbjct: 30 FELLIATMLSAQCTDVRVNIVTAELYKEHN-TPETILSLGEAGLLERIKTCGLANTKAKN 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I L +N++ +P T+ L LPGVG K A++ M++A+GI
Sbjct: 89 IIKTCHRLLENFDGKVPKTMAELTSLPGVGRKTANVVMSNAFGI---------------- 132
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+RLG K K + + L+ +P+S
Sbjct: 133 --------------------PAIAVDTHVFRVSNRLGLGK-GKNVTEVERALQKNIPKSR 171
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
WS +H L+ G++IC ++ P C+ C D C K +L
Sbjct: 172 WSAAHHQLIWHGRKICSARNPKCDICPLADYCDMRKHDL 210
>gi|452209474|ref|YP_007489588.1| Endonuclease III [Methanosarcina mazei Tuc01]
gi|452099376|gb|AGF96316.1| Endonuclease III [Methanosarcina mazei Tuc01]
Length = 234
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 42/213 (19%)
Query: 150 VLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDV--LGKLIIPVGFWKTKAKH 206
+L++ +LS+Q+ D ++N K++ + S D+ L I GF+K+KAK+
Sbjct: 53 LLVATVLSAQSTDVQINKVTENLFKKYRTAWDY---ASADIRELEADIYSTGFYKSKAKN 109
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK A+ ++ +NY ++P T+E L LPGVG K A++ + A+GI+ GI
Sbjct: 110 IKAAAQLIIENYGGEVPQTMEELVTLPGVGRKTANIVLARAFGIIEGIA----------- 158
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ P ++L S +
Sbjct: 159 ------------------------VDTHVKRVSGRLGLTR-NSDPVKIEQDLMSLARKED 193
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
++ L+ G+++C++++P C C+ K+LCP
Sbjct: 194 LDSISMTLIHHGRKVCQARKPRCSICVVKELCP 226
>gi|76802881|ref|YP_330976.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
gi|76558746|emb|CAI50339.1| endonuclease III [Natronomonas pharaonis DSM 2160]
Length = 229
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +L++++LS+Q DE + L E T E + ++ L I + ++ KA +
Sbjct: 35 RLELLVAVVLSAQCTDERVNTVTETLFEKYETPEEYASADKEELASDIDSITYYNNKAGY 94
Query: 207 IKMA-SDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILS 265
+ A +DI++K +N ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 LTSACADIVEK-HNGEVPDTMSELTDLAGVGRKTANVVLQHGHEVVEGI----------- 142
Query: 266 PSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPES 325
VD HV RIS RLG T K P+ +L +P+
Sbjct: 143 ------------------------VVDTHVQRISRRLGMT-TEKRPDAIEDDLIDIVPQD 177
Query: 326 LWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
W E HLL+ G++ C ++ P C C+ +D+CP K
Sbjct: 178 DWKEFTHLLISHGRETCTARNPDCGDCILEDICPSSK 214
>gi|406835463|ref|ZP_11095057.1| endonuclease III [Schlesneria paludicola DSM 18645]
Length = 225
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L + +LS+Q DE + L + T +++ + L +LI GF++ KA ++
Sbjct: 41 FQLLAATILSAQCTDERVNMVTPALFKRFPTPQDLAKADQTELEELIRSTGFYRNKATNL 100
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + Y ++P T+E L LPGVG K A++ + A+GI +G+
Sbjct: 101 IGMAQALAEKYEGELPQTLEELVALPGVGRKTANVVLGSAFGITSGV------------- 147
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+++ LG T PE ++L LP W
Sbjct: 148 ----------------------VVDTHVKRLTNLLGLTTS-NNPEQIERDLMELLPPEEW 184
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
+H L+ G+QIC ++RP C C + LCP+
Sbjct: 185 INFSHRLIHHGRQICIARRPKCLECPLRPLCPR 217
>gi|448523903|ref|ZP_21619090.1| endonuclease III [Halorubrum distributum JCM 10118]
gi|445700976|gb|ELZ52967.1| endonuclease III [Halorubrum distributum JCM 10118]
Length = 239
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYHGPEDYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAETHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ + PE ++L +PES
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITEEER-PEAIEQDLLEVVPESD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C C D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCADCALADVCPSEKGD 216
>gi|397690878|ref|YP_006528132.1| endonuclease III [Melioribacter roseus P3M]
gi|395812370|gb|AFN75119.1| endonuclease III [Melioribacter roseus P3M]
Length = 233
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q DE + +L + ++ + L K I GF+K KAK I
Sbjct: 50 FELLIATILSAQCTDERVNIVTDKLFKKYKKPDDYIKVKSEELEKDIYSTGFYKQKAKSI 109
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K L + Y +P E L KLPGVG K A + +A+GI
Sbjct: 110 KNCCRELIEKYGGKVPADFEALTKLPGVGRKTASVVAGNAFGI----------------- 152
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++ LG+ + P+ +L+ LPE LW
Sbjct: 153 -------------------PSIAVDTHVIRLTNLLGFVET-SDPKKIEFKLKELLPEDLW 192
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+HLL+ G++IC ++RP C+ C + CP K
Sbjct: 193 IVSSHLLMSHGRKICIARRPKCDECSISNYCPSKNK 228
>gi|284164375|ref|YP_003402654.1| endonuclease III [Haloterrigena turkmenica DSM 5511]
gi|284014030|gb|ADB59981.1| endonuclease III [Haloterrigena turkmenica DSM 5511]
Length = 227
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E E+ N E+ L + + + ++ +KA +
Sbjct: 35 RLELLIAVILSAQCTDERVNEETKHLFEKYDGAEDYANAPEEELAEDLNSITYYNSKAGY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK + + + + ++P+T++ L +L GVG K A++ + H +V GI
Sbjct: 95 IKSSCRTILEEHGGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R+S RLG T+ K PE ++L +P+
Sbjct: 143 -----------------------VVDTHVQRLSRRLGLTEE-KRPEAIEQDLMEIVPDGY 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL + G+ C ++ P C C+ D+CP K +
Sbjct: 179 WQQFTHLCIDHGRATCTARNPDCGDCVLADICPSEKGD 216
>gi|455789551|gb|EMF41472.1| ribosomal protein L28 [Leptospira interrogans serovar Lora str. TE
1992]
Length = 309
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 126 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 184
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 185 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 232
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 233 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 268
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 269 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 303
>gi|256827275|ref|YP_003151234.1| endonuclease III [Cryptobacterium curtum DSM 15641]
gi|256583418|gb|ACU94552.1| endonuclease III [Cryptobacterium curtum DSM 15641]
Length = 222
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 144 EVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTK 203
E + +L++++LS+Q D + L T + + + +I +GF++ K
Sbjct: 34 ECDPFRLLVAVVLSAQCTDAAVNKVTPSLFAAYPTPAALAQANVTDVATIIHSLGFFRAK 93
Query: 204 AKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPI 263
A H+ S +L ++ ++PN I+ L LPGVG K A++ M A+ GI
Sbjct: 94 ATHLVHLSQVLMTDFGGEVPNDIDALQTLPGVGRKTANVVMCEAFKNPQGIA-------- 145
Query: 264 LSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTK-VFKTPEDTRKELESWL 322
VD HV RI+H+L + TP T L
Sbjct: 146 ---------------------------VDTHVFRIAHKLKFAGPSADTPAKTEAALLKTY 178
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
P+ W +NH V FG++ C ++RP C C DLCP K++
Sbjct: 179 PQKDWLYINHQWVHFGREFCIARRPRCADCFIADLCPSASKDV 221
>gi|395215283|ref|ZP_10400884.1| endonuclease III [Pontibacter sp. BAB1700]
gi|394455890|gb|EJF10288.1| endonuclease III [Pontibacter sp. BAB1700]
Length = 228
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y ++++++LS+Q D+ + L E T E++ + + + +I + + KAKH+
Sbjct: 31 YELILAVVLSAQCTDKRVNMVTPALFESFPTPEHLAAATPEEIFPIIRSISYPNNKAKHL 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L + +N+++P+T+E L KLPGVG K A++ ++ W
Sbjct: 91 AGLGRMLVEQFNSEVPSTVEELVKLPGVGRKTANVIVSVIWNQ----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW-TKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S RLG +K KTP + KEL + LP+ L
Sbjct: 134 -------------------PAMAVDTHVFRVSKRLGLVSKTAKTPLEVEKELVANLPQEL 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
++ +H L+ G+ IC ++RP CE C C +K
Sbjct: 175 IAKAHHWLILHGRYICIARRPKCEECPLTHFCAFFQK 211
>gi|385799712|ref|YP_005836116.1| DNA-(apurinic or apyrimidinic site) lyase [Halanaerobium praevalens
DSM 2228]
gi|309389076|gb|ADO76956.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Halanaerobium praevalens DSM 2228]
Length = 218
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+QT D +VN K + T + I N S+ L K I +G ++ KAK+
Sbjct: 35 FELLIATILSAQTTDIQVNKVTKKLFKNYN-TPKKILNLSQKELEKKINSIGLYRNKAKY 93
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I + IL + +N+ +P T + L KL GVG K A++ ++ A+
Sbjct: 94 ILKTAKILIEEFNSQVPKTRKELLKLSGVGRKTANVVLSSAFA----------------- 136
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+ P VD HV R+S RLG + K T KEL +P
Sbjct: 137 ----------------KAAFP---VDTHVFRVSARLGLSSG-KNVSTTEKELTDLIPRKY 176
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W + +H L+ G+ +CK+Q P C+ C K +C
Sbjct: 177 WIDFHHWLIDHGRALCKAQNPDCKNCFAKKIC 208
>gi|45657625|ref|YP_001711.1| endonuclease III [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|45600865|gb|AAS70348.1| endonuclease III [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|456967076|gb|EMG08516.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 232
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 49 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 107
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 108 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 155
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 156 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 191
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 192 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 226
>gi|229084653|ref|ZP_04216921.1| endonuclease III [Bacillus cereus Rock3-44]
gi|228698676|gb|EEL51393.1| endonuclease III [Bacillus cereus Rock3-44]
Length = 215
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ N S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKSLFQKYKTPEDYLNVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L ++YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLEDYNGEVPQDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|448455900|ref|ZP_21594832.1| endonuclease III [Halorubrum lipolyticum DSM 21995]
gi|445813119|gb|EMA63101.1| endonuclease III [Halorubrum lipolyticum DSM 21995]
Length = 227
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 147 RYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
R +LI+++LS+Q DE + L E T E N ++ L + I + ++ KAK+
Sbjct: 35 RLELLIAVILSAQCTDERVNKVCADLFETYETPEEYANAPQEELAEAINSITYYNNKAKY 94
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ A + + ++ ++P+T+ L L GVG K A++ + H +V GI
Sbjct: 95 IRSACADIAEKHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGI------------ 142
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV R++ RLG T+ ++P ++L +PE
Sbjct: 143 -----------------------VVDTHVQRLTRRLGITE-EESPTAIEQDLLGVVPEGD 178
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
W + HL++ G+ C + P C+ C D+CP K +
Sbjct: 179 WQQFTHLMIDHGRATCTAINPDCDDCALADVCPSEKGD 216
>gi|228990662|ref|ZP_04150627.1| endonuclease III [Bacillus pseudomycoides DSM 12442]
gi|228769188|gb|EEM17786.1| endonuclease III [Bacillus pseudomycoides DSM 12442]
Length = 215
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ N S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKSLFQKYKTPEDYLNVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L ++YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLEDYNGEVPQDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|228952026|ref|ZP_04114121.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228957922|ref|ZP_04119662.1| endonuclease III [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229043392|ref|ZP_04191109.1| endonuclease III [Bacillus cereus AH676]
gi|229069199|ref|ZP_04202490.1| endonuclease III [Bacillus cereus F65185]
gi|229078829|ref|ZP_04211382.1| endonuclease III [Bacillus cereus Rock4-2]
gi|229126960|ref|ZP_04255971.1| endonuclease III [Bacillus cereus BDRD-Cer4]
gi|229178054|ref|ZP_04305426.1| endonuclease III [Bacillus cereus 172560W]
gi|228605542|gb|EEK62991.1| endonuclease III [Bacillus cereus 172560W]
gi|228656560|gb|EEL12387.1| endonuclease III [Bacillus cereus BDRD-Cer4]
gi|228704511|gb|EEL56944.1| endonuclease III [Bacillus cereus Rock4-2]
gi|228713951|gb|EEL65835.1| endonuclease III [Bacillus cereus F65185]
gi|228725973|gb|EEL77213.1| endonuclease III [Bacillus cereus AH676]
gi|228801838|gb|EEM48715.1| endonuclease III [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228807558|gb|EEM54082.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 202
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 18 FELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 77
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++PN + L KLPGVG K A++ ++ A+GI
Sbjct: 78 QKLCRMLLDDYNGEVPNDRDELTKLPGVGRKTANVVVSVAFGI----------------- 120
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 121 -------------------PAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEW 161
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 162 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 199
>gi|30019695|ref|NP_831326.1| endonuclease III [Bacillus cereus ATCC 14579]
gi|296502215|ref|YP_003663915.1| endonuclease III [Bacillus thuringiensis BMB171]
gi|365162347|ref|ZP_09358477.1| endonuclease III [Bacillus sp. 7_6_55CFAA_CT2]
gi|423414667|ref|ZP_17391787.1| endonuclease III [Bacillus cereus BAG3O-2]
gi|423423721|ref|ZP_17400752.1| endonuclease III [Bacillus cereus BAG3X2-2]
gi|423429551|ref|ZP_17406555.1| endonuclease III [Bacillus cereus BAG4O-1]
gi|423435133|ref|ZP_17412114.1| endonuclease III [Bacillus cereus BAG4X12-1]
gi|423504759|ref|ZP_17481350.1| endonuclease III [Bacillus cereus HD73]
gi|423587971|ref|ZP_17564058.1| endonuclease III [Bacillus cereus VD045]
gi|423629493|ref|ZP_17605241.1| endonuclease III [Bacillus cereus VD154]
gi|423647573|ref|ZP_17623143.1| endonuclease III [Bacillus cereus VD169]
gi|449088438|ref|YP_007420879.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|29895239|gb|AAP08527.1| Endonuclease III [Bacillus cereus ATCC 14579]
gi|296323267|gb|ADH06195.1| endonuclease III [Bacillus thuringiensis BMB171]
gi|363618660|gb|EHL70004.1| endonuclease III [Bacillus sp. 7_6_55CFAA_CT2]
gi|401097587|gb|EJQ05609.1| endonuclease III [Bacillus cereus BAG3O-2]
gi|401114549|gb|EJQ22407.1| endonuclease III [Bacillus cereus BAG3X2-2]
gi|401121857|gb|EJQ29646.1| endonuclease III [Bacillus cereus BAG4O-1]
gi|401125371|gb|EJQ33131.1| endonuclease III [Bacillus cereus BAG4X12-1]
gi|401227708|gb|EJR34237.1| endonuclease III [Bacillus cereus VD045]
gi|401267360|gb|EJR73420.1| endonuclease III [Bacillus cereus VD154]
gi|401285527|gb|EJR91366.1| endonuclease III [Bacillus cereus VD169]
gi|402455281|gb|EJV87064.1| endonuclease III [Bacillus cereus HD73]
gi|449022195|gb|AGE77358.1| endonuclease III [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 215
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++PN + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPNDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAMCRWKDSVLEVEKTLMKKVPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|340354779|ref|ZP_08677477.1| endonuclease III [Sporosarcina newyorkensis 2681]
gi|339623031|gb|EGQ27540.1| endonuclease III [Sporosarcina newyorkensis 2681]
Length = 215
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+Q D + + L + E+ S + L + I +G ++ K+K+I
Sbjct: 31 FELLIATLLSAQCTDVLVNRVTADLFQKYTAPEDYLGVSIEELQQDIRSIGLYRNKSKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S IL + + ++P + +++ LPGVG K A++ +++A+G+
Sbjct: 91 QALSGILIEEHGGEVPASRDVMMTLPGVGRKTANVVVSNAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R++ RLG + P D +++ W P W
Sbjct: 134 -------------------PALAVDTHVERVAKRLGMNRWKDRPIDVEEKIMRWTPMEKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
++ +H ++ FG+ CK+Q P+C C LC +G+K +
Sbjct: 175 TQTHHQIIFFGRYHCKAQNPNCPECPLLHLCREGQKRM 212
>gi|398339150|ref|ZP_10523853.1| endonuclease III [Leptospira kirschneri serovar Bim str. 1051]
Length = 232
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ N++ + LI GF++ KAK
Sbjct: 49 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFANSNLKNIETLIFSTGFYRNKAKS 107
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L ++++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 108 IQGFAKKLIQDFDGKIPKTISELITLPGFGRKTANVVLSEVHGLVEGI------------ 155
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L LPE
Sbjct: 156 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMFLLPEKY 191
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 192 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCP 224
>gi|336477928|ref|YP_004617069.1| endonuclease III [Methanosalsum zhilinae DSM 4017]
gi|335931309|gb|AEH61850.1| endonuclease III [Methanosalsum zhilinae DSM 4017]
Length = 221
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 36/213 (16%)
Query: 150 VLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKM 209
+L++ +LS+Q D + +L T+E+ + L + GF++ KA++IK
Sbjct: 43 LLVATVLSAQATDAQVNRVTEKLFSKYQTLEDFAQADLNELEMDVYSTGFYRNKARNIKE 102
Query: 210 ASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSR 269
++ I+ +++N+ IP ++ L KLPG+G K A++ ++ A+G GI
Sbjct: 103 SARIIIEDFNSRIPEDMDGLLKLPGIGRKTANIILSRAFGKNCGIA-------------- 148
Query: 270 QISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSE 329
VD HV R++ RLG+T K PE KEL + + W +
Sbjct: 149 ---------------------VDTHVARLAGRLGFTDS-KNPEKIEKELMALADKVDWED 186
Query: 330 VNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
++ L+ G+++C ++ P CE C+ LCP +
Sbjct: 187 LSMTLILHGRRVCHARGPECEVCVVNHLCPSSR 219
>gi|228996760|ref|ZP_04156397.1| endonuclease III [Bacillus mycoides Rock3-17]
gi|229004434|ref|ZP_04162178.1| endonuclease III [Bacillus mycoides Rock1-4]
gi|228756816|gb|EEM06117.1| endonuclease III [Bacillus mycoides Rock1-4]
gi|228763079|gb|EEM11989.1| endonuclease III [Bacillus mycoides Rock3-17]
Length = 215
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ N S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKSLFQKYKTPEDYLNVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L ++YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLEDYNGEVPQGRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|29654986|ref|NP_820678.1| endonuclease III [Coxiella burnetii RSA 493]
gi|153207567|ref|ZP_01946250.1| endonuclease III [Coxiella burnetii 'MSU Goat Q177']
gi|154706045|ref|YP_001423729.1| endonuclease III [Coxiella burnetii Dugway 5J108-111]
gi|161830587|ref|YP_001597521.1| endonuclease III [Coxiella burnetii RSA 331]
gi|165918359|ref|ZP_02218445.1| endonuclease III [Coxiella burnetii Q321]
gi|212211970|ref|YP_002302906.1| endonuclease III [Coxiella burnetii CbuG_Q212]
gi|212217979|ref|YP_002304766.1| endonuclease III [Coxiella burnetii CbuK_Q154]
gi|29542255|gb|AAO91192.1| endonuclease III [Coxiella burnetii RSA 493]
gi|120576535|gb|EAX33159.1| endonuclease III [Coxiella burnetii 'MSU Goat Q177']
gi|154355331|gb|ABS76793.1| endonuclease III [Coxiella burnetii Dugway 5J108-111]
gi|161762454|gb|ABX78096.1| endonuclease III [Coxiella burnetii RSA 331]
gi|165918009|gb|EDR36613.1| endonuclease III [Coxiella burnetii Q321]
gi|212010380|gb|ACJ17761.1| endonuclease III [Coxiella burnetii CbuG_Q212]
gi|212012241|gb|ACJ19621.1| endonuclease III [Coxiella burnetii CbuK_Q154]
Length = 218
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LIS+MLS+Q D + A L T + E L K I +G + TKAK+I
Sbjct: 30 FELLISVMLSAQATDISVNKATKDLYRIANTPAKVLALGESGLKKYIKSIGLYNTKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL +NY++ +P T E L LPGVG K A++ +N A+G
Sbjct: 90 IKTCKILVENYHSKVPRTREELEALPGVGRKTANVILNTAFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
E I VD H+ R+++R G + KTP K+L +P+
Sbjct: 132 ---------------EHAI---AVDTHIFRVANRTGLAR-GKTPLAVEKKLMEVVPKKYL 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
++ +H LV G+ IC ++RP C CL DLC
Sbjct: 173 ADAHHWLVLHGRYICIARRPKCSECLINDLC 203
>gi|428301435|ref|YP_007139741.1| DNA-(apurinic or apyrimidinic site) lyase [Calothrix sp. PCC 6303]
gi|428237979|gb|AFZ03769.1| endonuclease III [Calothrix sp. PCC 6303]
Length = 218
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 134 DHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKL 193
D + ++D + V +L++ +LS+Q DE + L ++ + + + +L
Sbjct: 27 DATCSLDYSTPV---QLLVATILSAQCTDERVNKVTPHLFTRFPDAVSMASADLEEIIEL 83
Query: 194 IIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTG 253
+ GF++ KAK+I+ A ++ K++ +PN +E L KLPGV K A++ + HA+GI G
Sbjct: 84 VRSTGFYRNKAKNIQGACRMIVKDFGGQVPNRMEDLLKLPGVARKTANVVLAHAFGINAG 143
Query: 254 IGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPED 313
+ VD HV R+S+RLG+TK P
Sbjct: 144 VT-----------------------------------VDTHVKRLSNRLGFTK-HDDPVR 167
Query: 314 TRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
++L LP++ W + L+ G+ +CK++ P C+ C DLCP E
Sbjct: 168 IERDLMPLLPQADWENWSIRLIYHGRAVCKARSPVCQECQLADLCPSKIAE 218
>gi|149183171|ref|ZP_01861619.1| endonuclease III [Bacillus sp. SG-1]
gi|148849106|gb|EDL63308.1| endonuclease III [Bacillus sp. SG-1]
Length = 216
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I+++LS+Q D + + L E T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FDLVIAVLLSAQCTDVLVNKVTKTLFEKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++L + Y ++P + + L KLPGVG K A++ ++ A+G
Sbjct: 91 RSLCELLLEEYGGEVPQSRDELVKLPGVGRKTANVVVSVAFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+S RLG + + + K L +P W
Sbjct: 133 ------------------EPALAVDTHVERVSKRLGICRWKDSVLEVEKTLMRKIPREKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
++ +H L+ FG+ CK+Q P CE C LC +G+K +
Sbjct: 175 TDTHHRLIFFGRYHCKAQSPQCEICPLLHLCREGQKRM 212
>gi|134300170|ref|YP_001113666.1| endonuclease III [Desulfotomaculum reducens MI-1]
gi|134052870|gb|ABO50841.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfotomaculum
reducens MI-1]
Length = 211
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q+ D + +L + T + + + + I G ++ K+K +
Sbjct: 29 FELLVAVILSAQSTDAQVNKITEKLFQKYNTAASFAQLTPAEVAEHIKGCGLFRNKSKFL 88
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S IL + YN +P E L KLPGVG K A++ + A+G
Sbjct: 89 VETSRILVEKYNGQVPQAREELEKLPGVGRKTANVVLGVAFG------------------ 130
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ P VD HVHR++HRLG KTPE KEL +P LW
Sbjct: 131 ---------------QNTFP---VDTHVHRLAHRLGLASG-KTPEQVEKELCQIMPPELW 171
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+H ++ G++IC ++ P C C DLCP+ K
Sbjct: 172 QPCHHWIIQHGRRICDARNPRCGQCCLIDLCPEALK 207
>gi|392377719|ref|YP_004984878.1| DNA-(Apurinic or apyrimidinic site) lyase [Azospirillum brasilense
Sp245]
gi|356879200|emb|CCD00104.1| DNA-(Apurinic or apyrimidinic site) lyase [Azospirillum brasilense
Sp245]
Length = 230
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ L+ ++S++T+DE RL T + + + L +L+ F + KA+ I
Sbjct: 48 FEQLVGSLISARTRDETTIVVCERLFAVARTPQQMVALTPAELTRLLDGATFPEPKARDI 107
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ S + ++ ++P+T + L GVGPK+A L + +GI
Sbjct: 108 RALSRRIITEHDGEVPDTPDALMAFHGVGPKIAALTLAVGFGI----------------- 150
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VDVHVHRI +R G+ TPE T L LP W
Sbjct: 151 -------------------PAVAVDVHVHRIVNRWGFVAA-PTPERTMVALMELLPRHYW 190
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
E+N LV FG+ IC RP C TC +C Q
Sbjct: 191 VEINERLVPFGKWICTGDRPRCSTCAMLSMCRQ 223
>gi|304406876|ref|ZP_07388530.1| endonuclease III [Paenibacillus curdlanolyticus YK9]
gi|304343863|gb|EFM09703.1| endonuclease III [Paenibacillus curdlanolyticus YK9]
Length = 235
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 40/231 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ + I+++LS+Q DE + L + E+ D L + I +G +++KA +I
Sbjct: 31 FELTIAVLLSAQCTDETVNRVTESLFQKYKKPEDYIAVPLDELEQDIRRIGLFRSKASNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ ++ + + D+P E L +LPGVG K A++ M++A+G
Sbjct: 91 QKLCHLVIEKFGGDVPREHEQLTELPGVGRKTANVVMSNAFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S RL K + + K+L +P W
Sbjct: 133 ------------------VPAIAVDTHVERVSKRLSIAKPDDSVLEVEKKLMKLVPREEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRKS 378
++ +H ++ FG+ CK+Q+P CE C D+C +G A R+K + R S
Sbjct: 175 TQTHHTMIFFGRYHCKAQQPKCEICPLLDICKEG----ARRMKPTANVRTS 221
>gi|418733573|ref|ZP_13290697.1| endonuclease III [Leptospira interrogans str. UI 12758]
gi|410773182|gb|EKR53213.1| endonuclease III [Leptospira interrogans str. UI 12758]
Length = 239
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 56 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 114
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 115 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 162
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 163 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 198
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 199 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 233
>gi|418726493|ref|ZP_13285104.1| endonuclease III [Leptospira interrogans str. UI 12621]
gi|409960403|gb|EKO24157.1| endonuclease III [Leptospira interrogans str. UI 12621]
Length = 238
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 55 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 113
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 114 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 161
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 162 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 197
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 198 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 232
>gi|417768530|ref|ZP_12416458.1| endonuclease III [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418681270|ref|ZP_13242503.1| endonuclease III [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418703567|ref|ZP_13264451.1| endonuclease III [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|421116855|ref|ZP_15577230.1| endonuclease III [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|421124170|ref|ZP_15584440.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421134644|ref|ZP_15594777.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|400327091|gb|EJO79347.1| endonuclease III [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409949503|gb|EKN99479.1| endonuclease III [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410011665|gb|EKO69781.1| endonuclease III [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410021228|gb|EKO88020.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410438657|gb|EKP87743.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|410766703|gb|EKR37386.1| endonuclease III [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|455669103|gb|EMF34271.1| endonuclease III [Leptospira interrogans serovar Pomona str. Fox
32256]
Length = 239
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 56 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 114
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 115 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 162
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 163 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 198
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 199 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 233
>gi|448677953|ref|ZP_21689143.1| endonuclease III [Haloarcula argentinensis DSM 12282]
gi|445773628|gb|EMA24661.1| endonuclease III [Haloarcula argentinensis DSM 12282]
Length = 227
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 45/244 (18%)
Query: 121 RKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIE 180
R H + P A+ ++S R +LI+++LS+Q DE + L E + E
Sbjct: 18 RLHEEYPDSAISLNYS---------NRLELLIAVVLSAQCTDERVNEVTADLFEKYQSAE 68
Query: 181 NICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMA 240
+ +E+ L + I + F K +++ +IL + ++ ++P+T+ L LPGVG K A
Sbjct: 69 DYAEATEEELAEDIYGITFHNNKGGYLQGIGEILIEEHDGEVPDTMSALTDLPGVGRKTA 128
Query: 241 HLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISH 300
++ + H IV GI VD HV R+S
Sbjct: 129 NVVLQHGHDIVEGI-----------------------------------VVDTHVQRLSR 153
Query: 301 RLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
RLG T + PE ++L +PE W + HLL+ G+ +C ++ CE C+ D+CP
Sbjct: 154 RLGLTDK-ERPEAIEQDLLDVVPEGEWQQFTHLLIDHGRAVCGARSADCEACVLADICPS 212
Query: 361 GKKE 364
K +
Sbjct: 213 EKGD 216
>gi|335046189|ref|ZP_08539212.1| endonuclease III [Oribacterium sp. oral taxon 108 str. F0425]
gi|333759975|gb|EGL37532.1| endonuclease III [Oribacterium sp. oral taxon 108 str. F0425]
Length = 240
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L + +LS+Q D + +L + ++E+ + L + I GF+ KAK+I
Sbjct: 40 WQLLFATILSAQCTDARVNMVTEKLFQKYKSLEDFASCDLKELEEDIHSTGFYHNKAKNI 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L + Y ++P I+ L LPGVG K +L + + +
Sbjct: 100 KACAAALVEEYGGEVPKDIDSLTALPGVGRKTGNLILGNIF------------------- 140
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV RIS+RLG P T +L LPE W
Sbjct: 141 -----------------HIPSIVVDTHVKRISNRLGLADS-SDPTKTEFQLMEVLPEEFW 182
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
N ++ G+ +C SQ+P CE C DLCP K + +SP +RK
Sbjct: 183 IRWNTHIIALGRTLCTSQKPKCELCYLNDLCPSVKGD--PETWRSPAERK 230
>gi|294828041|ref|NP_712344.2| endonuclease III [Leptospira interrogans serovar Lai str. 56601]
gi|386074221|ref|YP_005988538.1| endonuclease III [Leptospira interrogans serovar Lai str. IPAV]
gi|417761249|ref|ZP_12409263.1| endonuclease III [Leptospira interrogans str. 2002000624]
gi|417763991|ref|ZP_12411964.1| endonuclease III [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|417773602|ref|ZP_12421479.1| endonuclease III [Leptospira interrogans str. 2002000621]
gi|417783206|ref|ZP_12430929.1| endonuclease III [Leptospira interrogans str. C10069]
gi|418667827|ref|ZP_13229232.1| endonuclease III [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418672668|ref|ZP_13234004.1| endonuclease III [Leptospira interrogans str. 2002000623]
gi|418692312|ref|ZP_13253390.1| endonuclease III [Leptospira interrogans str. FPW2026]
gi|418710899|ref|ZP_13271665.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
UI 08368]
gi|418717894|ref|ZP_13277433.1| endonuclease III [Leptospira interrogans str. UI 08452]
gi|421086134|ref|ZP_15546985.1| endonuclease III [Leptospira santarosai str. HAI1594]
gi|421102354|ref|ZP_15562958.1| endonuclease III [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421121152|ref|ZP_15581451.1| endonuclease III [Leptospira interrogans str. Brem 329]
gi|293385888|gb|AAN49362.2| endonuclease III [Leptospira interrogans serovar Lai str. 56601]
gi|353458010|gb|AER02555.1| endonuclease III [Leptospira interrogans serovar Lai str. IPAV]
gi|400353823|gb|EJP05976.1| endonuclease III [Leptospira interrogans serovar Bulgarica str.
Mallika]
gi|400357545|gb|EJP13665.1| endonuclease III [Leptospira interrogans str. FPW2026]
gi|409943243|gb|EKN88846.1| endonuclease III [Leptospira interrogans str. 2002000624]
gi|409953907|gb|EKO08403.1| endonuclease III [Leptospira interrogans str. C10069]
gi|410345980|gb|EKO97024.1| endonuclease III [Leptospira interrogans str. Brem 329]
gi|410367468|gb|EKP22852.1| endonuclease III [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431699|gb|EKP76059.1| endonuclease III [Leptospira santarosai str. HAI1594]
gi|410576690|gb|EKQ39695.1| endonuclease III [Leptospira interrogans str. 2002000621]
gi|410580356|gb|EKQ48181.1| endonuclease III [Leptospira interrogans str. 2002000623]
gi|410756272|gb|EKR17897.1| endonuclease III [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410768499|gb|EKR43746.1| endonuclease III [Leptospira interrogans serovar Grippotyphosa str.
UI 08368]
gi|410786767|gb|EKR80505.1| endonuclease III [Leptospira interrogans str. UI 08452]
gi|456821638|gb|EMF70144.1| endonuclease III [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 239
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 56 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIETLIFSTGFYRNKAKS 114
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 115 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 162
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 163 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 198
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 199 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 233
>gi|418701055|ref|ZP_13261990.1| endonuclease III [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759953|gb|EKR26155.1| endonuclease III [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 238
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
Y + I+++LS+Q DE VN K T+E+ ++ + LI GF++ KAK
Sbjct: 55 YELAIAVILSAQCTDERVNQVTPALFKAFP-TLESFASSDLKTIEALIFSTGFYRNKAKS 113
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ + L +++ IP TI L LPG G K A++ ++ G+V GI
Sbjct: 114 IQGFAKKLLNDFDGKIPKTIPELITLPGFGRKTANVVLSEVHGLVEGI------------ 161
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
VD HV+R+S LG T P K+L S LPE
Sbjct: 162 -----------------------VVDTHVNRLSKVLGLTTK-NDPVQVEKDLMSLLPEKY 197
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
W +++ L+ G++ CK+ R CE C+ K CP
Sbjct: 198 WRDISLYLIFLGRKSCKAHRRFCEDCILKKDCPSS 232
>gi|212638977|ref|YP_002315497.1| EndoIII-related endonuclease [Anoxybacillus flavithermus WK1]
gi|212560457|gb|ACJ33512.1| Predicted EndoIII-related endonuclease [Anoxybacillus flavithermus
WK1]
Length = 225
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + +L E T E+ + + L + I +G ++ KAK+I
Sbjct: 40 FELLIAVVLSAQCTDALVNKVTKQLFEKYKTPEDYVSVPLEELQQDIRSIGLYRNKAKNI 99
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ IL + Y+ ++P + L KLPGVG K A++ ++ A+G+
Sbjct: 100 QQLCRILIEQYSGEVPKNRDELMKLPGVGRKTANVVVSVAFGV----------------- 142
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + + L +P+ W
Sbjct: 143 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEETLMKKIPKEEW 183
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H L+ FG+ CK+Q P C+ C LC +GKK +
Sbjct: 184 SVTHHRLIFFGRYHCKAQSPKCDVCPLLHLCREGKKRM 221
>gi|85710083|ref|ZP_01041148.1| Endonuclease III/Nth [Erythrobacter sp. NAP1]
gi|85688793|gb|EAQ28797.1| Endonuclease III/Nth [Erythrobacter sp. NAP1]
Length = 217
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 37/217 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ IS MLS+Q+ D AA L + T ++ +++ + K I P G + K K+I
Sbjct: 35 FRSCISCMLSAQSLDRNTAAATKALFKLAKTPADMLALNDEAIAKAIKPCGLYNNKTKNI 94
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L + ++ +P+T E L LPG+G K A + M+ +G KD
Sbjct: 95 RKFCTALIEEHDGVVPDTREGLMSLPGIGRKCADIVMSFTFG------KD---------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HVHR+ +R+G T KT E T ++LE PE
Sbjct: 139 --------------------VIAVDTHVHRVCNRIGLTDA-KTAEKTAQQLEERSPEWAL 177
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKE 364
++ + L+ FG+++C+S+ P C+ C+ DLC G E
Sbjct: 178 ADGHFWLIQFGKRVCRSRIPKCDICVVSDLCETGPIE 214
>gi|315646506|ref|ZP_07899624.1| endonuclease III [Paenibacillus vortex V453]
gi|315278149|gb|EFU41469.1| endonuclease III [Paenibacillus vortex V453]
Length = 228
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 38/219 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ + I+++LS+Q DE VN +++ ++ + E+ L + I +G ++ KAKH
Sbjct: 30 FELTIAVLLSAQCTDETVNKVTKDLFQKYKTPLDYVSVPIEE-LEQDIRRIGLYRNKAKH 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ IL + Y ++P + L KLPGVG K A++ +++A+G+
Sbjct: 89 IQNLCSILIEQYGGEVPEAHDELVKLPGVGRKTANVVVSNAFGV---------------- 132
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S RLG + + K+L +P
Sbjct: 133 --------------------PAIAVDTHVERVSKRLGLAGWKDSVLEVEKKLMKRVPREE 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
W+ +H ++ FG+ CK+Q P C+ C D+C +GKK +
Sbjct: 173 WTLTHHRIIFFGRYHCKAQNPQCQVCPLLDVCREGKKRM 211
>gi|442323962|ref|YP_007363983.1| base excision DNA repair protein [Myxococcus stipitatus DSM 14675]
gi|441491604|gb|AGC48299.1| base excision DNA repair protein [Myxococcus stipitatus DSM 14675]
Length = 233
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 46/247 (18%)
Query: 107 PAHWKEVLNNIRE-MRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
P +VL +RE +R DA + A+ ++ + L++ +LS +T DEV+
Sbjct: 17 PFDIDDVLARVREAVRDLPDAAMFALAARGHDSL--------FEQLVACVLSIRTLDEVS 68
Query: 166 HAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNT 225
A L + T + + S + LI PV F + KA + + + +P
Sbjct: 69 LPASLALLQKASTPDALARMSPGDIDALIQPVTFHEAKAHQLHAIAVRTRDELGGALPCD 128
Query: 226 IELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKK 285
++L GVGPK AHL A GI G ++S
Sbjct: 129 AQVLQSFKGVGPKCAHL----ALGIACG-------HDVIS-------------------- 157
Query: 286 IPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQ 345
VD+HVHR+++R G+ K +TP+ T + LE+ LP W E+N LLV FG+ +C
Sbjct: 158 -----VDIHVHRVTNRWGYVKT-RTPQATLEALEARLPRRYWVEINRLLVPFGKHVCTGA 211
Query: 346 RPSCETC 352
RP C TC
Sbjct: 212 RPRCSTC 218
>gi|406967816|gb|EKD92806.1| hypothetical protein ACD_28C00327G0009 [uncultured bacterium]
Length = 224
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +++++MLS+Q DE VN H ++ + E+ L I G++ KAK+
Sbjct: 31 FELMVAVMLSAQCTDERVNRVTPSFFPTHNTPLKML-QLGEETLRAKIRSCGYFNQKAKN 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I AS L + Y+ +IP ++E L LPGVG K A + ++ A+ I
Sbjct: 90 IIKASQKLIEKYHGEIPQSLEDLTSLPGVGLKSAGVVLSQAFAI---------------- 133
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P VD HV R+++R+G KT + T LE LP+
Sbjct: 134 --------------------PAFPVDTHVFRVANRIGLVHE-KTRDKTAYALEKTLPQDC 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELA 366
W + + L+ G++ CKSQ+P C C KDLC KK L
Sbjct: 173 WIDFHLQLIFHGRKTCKSQKPRCYECPVKDLCEYKKKNLV 212
>gi|406903824|gb|EKD45786.1| hypothetical protein ACD_69C00136G0003 [uncultured bacterium]
Length = 210
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI++MLS++T D+ + L T E I + K I GF+ TKAK+I
Sbjct: 30 FELLIAVMLSARTTDKTVNKITSSLFAIANTPEKILKLGIKEIKKHIKSSGFFNTKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+IL KN+N+ IP T E L LPGVG K A++ +N A+
Sbjct: 90 AKTCEILVKNFNSQIPKTREELETLPGVGRKTANVILNIAFN------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+++R+G + KTPE+ +L +P+
Sbjct: 132 ------------------QPTIAVDTHVFRVANRIGIAQG-KTPEEIETKLLKIIPKKFA 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+LL+ G+ C +Q+P C++C+ ++C
Sbjct: 173 KTAGNLLILHGRYTCIAQKPKCKSCVINEMC 203
>gi|113476793|ref|YP_722854.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Trichodesmium erythraeum IMS101]
gi|110167841|gb|ABG52381.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Trichodesmium erythraeum IMS101]
Length = 217
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 149 HVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+L++ +LS+Q DE VN K+ + + N + L L+ GF++ KAK+I
Sbjct: 39 QLLVATILSAQCTDERVNKVTPALFKKFPDALA-LANADLEELENLVRSTGFYRNKAKNI 97
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ A ++ +N+ +P +E L +LPGV K A++ + H +GI+ G+
Sbjct: 98 QSACQMIIDKFNSHVPKQMEQLLQLPGVARKTANVVLAHGYGIIVGVT------------ 145
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R+S RLG T+ P ++L +P+ W
Sbjct: 146 -----------------------VDTHVKRLSQRLGLTE-HSNPVKIERDLMELIPQPDW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ L+ G+ ICK++ P+C CL DLCP
Sbjct: 182 ENWSIRLIYHGRAICKAKNPACNQCLLADLCP 213
>gi|373486513|ref|ZP_09577186.1| endonuclease III [Holophaga foetida DSM 6591]
gi|372011374|gb|EHP11969.1| endonuclease III [Holophaga foetida DSM 6591]
Length = 231
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 39/221 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ ++++ +LS+Q D VN G + + + L LI GF++ KA++
Sbjct: 33 FQLVVATILSAQCTDARVNLVTPGLFLRFPDALA-LAQAEQSELETLIRSTGFFRNKARN 91
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ + L + + ++P + L LPGVG K A++ + +A+GI
Sbjct: 92 LIGMAHALVERHGGEVPREAQALGALPGVGQKTANVVLANAFGI---------------- 135
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P L VD H+ R++ RLG ++ TPE +L + P
Sbjct: 136 --------------------PALAVDTHIFRVARRLGLSEA-STPEKVEADLCALFPRET 174
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAE 367
W E++HLL+ G++ C +++P C C DLCP G ++A+
Sbjct: 175 WIELHHLLIFHGRRTCDARKPDCPNCCTLDLCPTGTGKIAD 215
>gi|297588394|ref|ZP_06947037.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
gi|297573767|gb|EFH92488.1| DNA-(apurinic or apyrimidinic site) lyase [Finegoldia magna ATCC
53516]
Length = 208
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +LI+ +LS+Q D VN KEH T + I + D L K I G +KTK+K+
Sbjct: 30 FELLIATILSAQCTDVRVNKVTSVLFKEHN-TPKTILDLGVDGLAKYIKSCGLYKTKSKN 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I ++L +Y++ +P+ I+ L KLPGVG K A++ +++A+G
Sbjct: 89 IINTCNVLYHDYDSKVPDNIDELMKLPGVGRKTANVVVSNAFG----------------- 131
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+++R+G K T L +P
Sbjct: 132 -------------------TPAIAVDTHVFRVTNRIGIVNE-KDVLSTEMALMQEIPRDR 171
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
WS+ +HL + G+ +CK++ P CE C+ D C
Sbjct: 172 WSKSHHLFIWHGRNLCKARNPRCEECILNDRC 203
>gi|389693731|ref|ZP_10181825.1| endonuclease III [Microvirga sp. WSM3557]
gi|388587117|gb|EIM27410.1| endonuclease III [Microvirga sp. WSM3557]
Length = 251
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L+++ LS+Q+ D + A L T + + E+ L I + F+ TKAK++
Sbjct: 70 YTLLVAVALSAQSTDVGVNKATRNLFPVADTPQKMLALGEEGLRGHIRTLNFYNTKAKNV 129
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ L + D+PN++E+L LPGVG K A + +N A+
Sbjct: 130 IAAARRLVDEFGGDVPNSVEVLETLPGVGRKTASVVVNIAF------------------- 170
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
K P++ VD H+ R+++R+ + KTP DT+ LE+ +P+
Sbjct: 171 -----------------KDPRIAVDTHIFRVTNRIPLA-ITKTPLDTQVALEALIPDEYR 212
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ ICK++RP C C DLC
Sbjct: 213 LHAHHWLILHGRYICKARRPECWRCPINDLC 243
>gi|442805631|ref|YP_007373780.1| endonuclease III [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442741481|gb|AGC69170.1| endonuclease III [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 212
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 37/217 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+LI+ L++Q DE + L + T E+ N L + I P GF++ KA++IK
Sbjct: 32 QLLIATQLAAQCTDERVNIVTKELFKKYKTAEDFANADLKALEQDIRPTGFYRNKARNIK 91
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
++ + +N ++P+++E L LPGVG K A++ + + + I
Sbjct: 92 ECCRMIIEKFNGEVPDSMEKLLMLPGVGRKTANVILGNIYNI------------------ 133
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
P + VD H R+S+R+G TK + P +L +P WS
Sbjct: 134 ------------------PGIVVDTHAKRLSNRMGLTKE-EDPVKIEFDLMKIIPREKWS 174
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+ ++ LV G+ +CK+++P CE C + C G+K L
Sbjct: 175 KFSNQLVFHGRAVCKARKPDCEACSIRPYCVYGQKTL 211
>gi|423397639|ref|ZP_17374840.1| endonuclease III [Bacillus cereus BAG2X1-1]
gi|423408497|ref|ZP_17385646.1| endonuclease III [Bacillus cereus BAG2X1-3]
gi|401649685|gb|EJS67263.1| endonuclease III [Bacillus cereus BAG2X1-1]
gi|401657587|gb|EJS75095.1| endonuclease III [Bacillus cereus BAG2X1-3]
Length = 215
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 36/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPRDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKVPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
+H ++ FG+ CK+QRP CE C ++C +GKK + E+
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEDCRLLEVCREGKKRMKEK 215
>gi|30261643|ref|NP_844020.1| endonuclease III [Bacillus anthracis str. Ames]
gi|47526844|ref|YP_018193.1| endonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49184473|ref|YP_027725.1| endonuclease III [Bacillus anthracis str. Sterne]
gi|49480992|ref|YP_035762.1| endonuclease III [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52143802|ref|YP_083026.1| endonuclease III [Bacillus cereus E33L]
gi|165869478|ref|ZP_02214137.1| endonuclease III [Bacillus anthracis str. A0488]
gi|167633230|ref|ZP_02391555.1| endonuclease III [Bacillus anthracis str. A0442]
gi|167639056|ref|ZP_02397329.1| endonuclease III [Bacillus anthracis str. A0193]
gi|170686214|ref|ZP_02877436.1| endonuclease III [Bacillus anthracis str. A0465]
gi|170706506|ref|ZP_02896966.1| endonuclease III [Bacillus anthracis str. A0389]
gi|177650476|ref|ZP_02933443.1| endonuclease III [Bacillus anthracis str. A0174]
gi|190568691|ref|ZP_03021596.1| endonuclease III [Bacillus anthracis str. Tsiankovskii-I]
gi|196033451|ref|ZP_03100863.1| endonuclease III [Bacillus cereus W]
gi|196039039|ref|ZP_03106346.1| endonuclease III [Bacillus cereus NVH0597-99]
gi|206974874|ref|ZP_03235789.1| endonuclease III [Bacillus cereus H3081.97]
gi|217959128|ref|YP_002337676.1| endonuclease III [Bacillus cereus AH187]
gi|218902758|ref|YP_002450592.1| endonuclease III [Bacillus cereus AH820]
gi|222095276|ref|YP_002529336.1| endonuclease iii [Bacillus cereus Q1]
gi|225863510|ref|YP_002748888.1| endonuclease III [Bacillus cereus 03BB102]
gi|227815606|ref|YP_002815615.1| endonuclease III [Bacillus anthracis str. CDC 684]
gi|228914222|ref|ZP_04077838.1| endonuclease III [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228926677|ref|ZP_04089746.1| endonuclease III [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228932935|ref|ZP_04095800.1| endonuclease III [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228945246|ref|ZP_04107602.1| endonuclease III [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229090610|ref|ZP_04221844.1| endonuclease III [Bacillus cereus Rock3-42]
gi|229121189|ref|ZP_04250426.1| endonuclease III [Bacillus cereus 95/8201]
gi|229138342|ref|ZP_04266936.1| endonuclease III [Bacillus cereus BDRD-ST26]
gi|229183841|ref|ZP_04311058.1| endonuclease III [Bacillus cereus BGSC 6E1]
gi|229195848|ref|ZP_04322607.1| endonuclease III [Bacillus cereus m1293]
gi|229603272|ref|YP_002866050.1| endonuclease III [Bacillus anthracis str. A0248]
gi|254683134|ref|ZP_05146995.1| endonuclease III [Bacillus anthracis str. CNEVA-9066]
gi|254723722|ref|ZP_05185508.1| endonuclease III [Bacillus anthracis str. A1055]
gi|254734483|ref|ZP_05192195.1| endonuclease III [Bacillus anthracis str. Western North America
USA6153]
gi|254740894|ref|ZP_05198582.1| endonuclease III [Bacillus anthracis str. Kruger B]
gi|254755133|ref|ZP_05207167.1| endonuclease III [Bacillus anthracis str. Vollum]
gi|254759670|ref|ZP_05211694.1| endonuclease III [Bacillus anthracis str. Australia 94]
gi|300117426|ref|ZP_07055216.1| endonuclease III [Bacillus cereus SJ1]
gi|301053184|ref|YP_003791395.1| endonuclease III [Bacillus cereus biovar anthracis str. CI]
gi|375283626|ref|YP_005104064.1| endonuclease III [Bacillus cereus NC7401]
gi|376265489|ref|YP_005118201.1| Endonuclease III [Bacillus cereus F837/76]
gi|386735350|ref|YP_006208531.1| Endonuclease III [Bacillus anthracis str. H9401]
gi|421508305|ref|ZP_15955219.1| endonuclease III [Bacillus anthracis str. UR-1]
gi|421638656|ref|ZP_16079251.1| endonuclease III [Bacillus anthracis str. BF1]
gi|423353869|ref|ZP_17331495.1| endonuclease III [Bacillus cereus IS075]
gi|423371627|ref|ZP_17348967.1| endonuclease III [Bacillus cereus AND1407]
gi|423552619|ref|ZP_17528946.1| endonuclease III [Bacillus cereus ISP3191]
gi|423569435|ref|ZP_17545681.1| endonuclease III [Bacillus cereus MSX-A12]
gi|423576637|ref|ZP_17552756.1| endonuclease III [Bacillus cereus MSX-D12]
gi|423606650|ref|ZP_17582543.1| endonuclease III [Bacillus cereus VD102]
gi|30255871|gb|AAP25506.1| endonuclease III [Bacillus anthracis str. Ames]
gi|47501992|gb|AAT30668.1| endonuclease III [Bacillus anthracis str. 'Ames Ancestor']
gi|49178400|gb|AAT53776.1| endonuclease III [Bacillus anthracis str. Sterne]
gi|49332548|gb|AAT63194.1| endonuclease III [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51977271|gb|AAU18821.1| endonuclease III [Bacillus cereus E33L]
gi|164714918|gb|EDR20436.1| endonuclease III [Bacillus anthracis str. A0488]
gi|167512846|gb|EDR88219.1| endonuclease III [Bacillus anthracis str. A0193]
gi|167531268|gb|EDR93946.1| endonuclease III [Bacillus anthracis str. A0442]
gi|170128604|gb|EDS97471.1| endonuclease III [Bacillus anthracis str. A0389]
gi|170669911|gb|EDT20652.1| endonuclease III [Bacillus anthracis str. A0465]
gi|172083620|gb|EDT68680.1| endonuclease III [Bacillus anthracis str. A0174]
gi|190560291|gb|EDV14271.1| endonuclease III [Bacillus anthracis str. Tsiankovskii-I]
gi|195993885|gb|EDX57841.1| endonuclease III [Bacillus cereus W]
gi|196030184|gb|EDX68784.1| endonuclease III [Bacillus cereus NVH0597-99]
gi|206746893|gb|EDZ58285.1| endonuclease III [Bacillus cereus H3081.97]
gi|217068099|gb|ACJ82349.1| endonuclease III [Bacillus cereus AH187]
gi|218539442|gb|ACK91840.1| endonuclease III [Bacillus cereus AH820]
gi|221239334|gb|ACM12044.1| endonuclease III [Bacillus cereus Q1]
gi|225788128|gb|ACO28345.1| endonuclease III [Bacillus cereus 03BB102]
gi|227002398|gb|ACP12141.1| endonuclease III [Bacillus anthracis str. CDC 684]
gi|228587621|gb|EEK45680.1| endonuclease III [Bacillus cereus m1293]
gi|228599690|gb|EEK57293.1| endonuclease III [Bacillus cereus BGSC 6E1]
gi|228645107|gb|EEL01345.1| endonuclease III [Bacillus cereus BDRD-ST26]
gi|228662308|gb|EEL17911.1| endonuclease III [Bacillus cereus 95/8201]
gi|228692753|gb|EEL46478.1| endonuclease III [Bacillus cereus Rock3-42]
gi|228814481|gb|EEM60746.1| endonuclease III [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228826738|gb|EEM72507.1| endonuclease III [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228833053|gb|EEM78621.1| endonuclease III [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228845426|gb|EEM90461.1| endonuclease III [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229267680|gb|ACQ49317.1| endonuclease III [Bacillus anthracis str. A0248]
gi|298725261|gb|EFI65913.1| endonuclease III [Bacillus cereus SJ1]
gi|300375353|gb|ADK04257.1| endonuclease III [Bacillus cereus biovar anthracis str. CI]
gi|358352152|dbj|BAL17324.1| endonuclease III [Bacillus cereus NC7401]
gi|364511289|gb|AEW54688.1| Endonuclease III [Bacillus cereus F837/76]
gi|384385202|gb|AFH82863.1| Endonuclease III [Bacillus anthracis str. H9401]
gi|401088444|gb|EJP96632.1| endonuclease III [Bacillus cereus IS075]
gi|401101338|gb|EJQ09328.1| endonuclease III [Bacillus cereus AND1407]
gi|401186561|gb|EJQ93649.1| endonuclease III [Bacillus cereus ISP3191]
gi|401206690|gb|EJR13477.1| endonuclease III [Bacillus cereus MSX-A12]
gi|401207633|gb|EJR14412.1| endonuclease III [Bacillus cereus MSX-D12]
gi|401241475|gb|EJR47863.1| endonuclease III [Bacillus cereus VD102]
gi|401821555|gb|EJT20711.1| endonuclease III [Bacillus anthracis str. UR-1]
gi|403394183|gb|EJY91424.1| endonuclease III [Bacillus anthracis str. BF1]
Length = 215
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 SVTHHRMIFFGRYHCKAQRPQCEECPLLEVCREGKKRM 212
>gi|423403841|ref|ZP_17381014.1| endonuclease III [Bacillus cereus BAG2X1-2]
gi|423475529|ref|ZP_17452244.1| endonuclease III [Bacillus cereus BAG6X1-1]
gi|401647985|gb|EJS65588.1| endonuclease III [Bacillus cereus BAG2X1-2]
gi|402435399|gb|EJV67433.1| endonuclease III [Bacillus cereus BAG6X1-1]
Length = 215
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCQMLLDDYNGKVPEDRDELTKLPGVGRKTANVVVSVAYGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 SVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|212696106|ref|ZP_03304234.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325846564|ref|ZP_08169479.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676735|gb|EEB36342.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325481322|gb|EGC84363.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 221
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 37/216 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++ +LS+Q D + + ++ E+ + I G +K KAK+I
Sbjct: 41 FELLVATILSAQCTDVRVNKVTNHMFKYANKPEDFSKMDIKEIEDYIKTCGLYKNKAKNI 100
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K AS +L + ++ ++P+ ++ L KLPGVG K A++ M++A+GI
Sbjct: 101 KNASIMLIREFDGEVPSNMKDLIKLPGVGRKTANVVMSNAFGI----------------- 143
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+ VD HV R+S+R+G K +T K+L LP+ W
Sbjct: 144 -------------------DAIAVDTHVQRVSNRIGLAHS-KDVLNTEKDLRKNLPKEKW 183
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
S+++H ++ G++ICK++ P CE C +DLC K+
Sbjct: 184 SKLHHQIIAHGRKICKARNPLCEECDLRDLCEDYKE 219
>gi|423524551|ref|ZP_17501024.1| endonuclease III [Bacillus cereus HuA4-10]
gi|401170394|gb|EJQ77635.1| endonuclease III [Bacillus cereus HuA4-10]
Length = 215
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCQMLLDDYNGKVPEDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYYCKAQRPQCEECRLLEMCREGKKRM 212
>gi|354582725|ref|ZP_09001626.1| endonuclease III [Paenibacillus lactis 154]
gi|353199017|gb|EHB64483.1| endonuclease III [Paenibacillus lactis 154]
Length = 228
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 38/219 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ + I+++LS+Q DE VN +++ ++ + E+ L + I +G ++ KAKH
Sbjct: 30 FELTIAVLLSAQCTDETVNKVTKDLFQKYKTPLDYVSVPLEE-LEQDIRRIGLYRNKAKH 88
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I+ IL + Y ++P + L KLPGVG K A++ +++A+G+
Sbjct: 89 IQNLCAILIEQYGGEVPEAHDELVKLPGVGRKTANVVVSNAFGV---------------- 132
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S RLG + + K+L +P
Sbjct: 133 --------------------PAIAVDTHVERVSKRLGLAAWKDSVLEVEKKLMKRVPREE 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
W+ +H ++ FG+ CK+Q P C+ C D+C +GKK +
Sbjct: 173 WTITHHRIIFFGRYHCKAQNPQCQICPLLDVCREGKKRM 211
>gi|348027401|ref|YP_004767206.1| endonuclease III [Megasphaera elsdenii DSM 20460]
gi|341823455|emb|CCC74379.1| endonuclease III [Megasphaera elsdenii DSM 20460]
Length = 210
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 39/217 (17%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ ++I+++LS+Q DE VN G E+ T E + + L + I G + +KAK+
Sbjct: 32 FELMIAVILSAQCTDERVNIVTAGMFPEYN-TPEKMLTLGLEGLEEKIRTCGLYHSKAKN 90
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I IL + Y+ ++P T + L KLPGVG K A+ ++ I D
Sbjct: 91 ILANCAILCEKYHGEVPQTFDELVKLPGVGRKTAN--------VLVSILFDT-------- 134
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+RL + KTP + K L+ +P+
Sbjct: 135 --------------------PAIAVDTHVFRVSNRLQLAEG-KTPLEVEKGLQKAIPKEW 173
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
WS +H L+ G+++CK+++P C+ C DLCP +K
Sbjct: 174 WSRAHHWLIWHGRRVCKARKPLCDNCFLADLCPSCQK 210
>gi|406698239|gb|EKD01479.1| DNA-(apurinic or apyrimidinic site) lyase [Trichosporon asahii var.
asahii CBS 8904]
Length = 403
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 106 EPAHWKEVLNNIREMRKHGDAPVDAMGWDHSANVDIAPEVRRYHVLISLMLSSQTKDEVN 165
EPA W E I MR APVD MG + A ++ L +TKD V
Sbjct: 126 EPAKWYEQYQLIERMRAGISAPVDTMGCERPATME--------------NLDPKTKDAVT 171
Query: 166 HAAMGRLK---EHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDI 222
AA+ L GLT E + E + + I VGFW+ K ++I+ A+ L + ++ D+
Sbjct: 172 SAAVTNLHLALPGGLTAETLAAADEKTVSEAINKVGFWRRKTEYIQDAARALLEKWDGDV 231
Query: 223 PNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
P +IE LC L GVGPKM L + AW I ++RQP
Sbjct: 232 PQSIEELCTLKGVGPKMGFLALQAAWNI------GDARQP 265
>gi|344924379|ref|ZP_08777840.1| endonuclease III [Candidatus Odyssella thessalonicensis L13]
Length = 211
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
Y +L+++ LS+Q D + A L + T + + + E+ L I +G + +KAK++
Sbjct: 30 YTLLVAVTLSAQATDVGVNKATKSLFKVADTPQKLLDLGEESLKSYIKTIGLFNSKAKNL 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
A+ +L + +N +P E L +LPGVG K A++ +N A+G
Sbjct: 90 IAAAKMLVEEFNGQVPRNREELERLPGVGRKTANVVLNVAFGD----------------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD H+ R+S+R+G T+ KTP D +LE+ +P
Sbjct: 133 -------------------PLIAVDTHIFRVSNRIGLTQG-KTPLDVELQLENGIPGDYR 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+H L+ G+ CK+++P C CL DLC
Sbjct: 173 LHAHHWLILHGRYTCKARKPECAKCLIADLC 203
>gi|89099879|ref|ZP_01172751.1| endonuclease III [Bacillus sp. NRRL B-14911]
gi|89085437|gb|EAR64566.1| endonuclease III [Bacillus sp. NRRL B-14911]
Length = 215
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ S D L I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLAVSLDELQNDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+L YN +P+ + L KLPGVG K A +V + D
Sbjct: 91 HKLCRLLIDEYNGIVPHDRDELTKLPGVGRKTA--------NVVVSVAYD---------- 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R+S RLG+ + + + K L +PE W
Sbjct: 133 ------------------VPAIAVDTHVERVSKRLGFCRWKDSVLEVEKTLMKKVPEEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P CE C DLC +G+K +
Sbjct: 175 SVTHHRMIFFGRYHCKAQNPQCEICPLLDLCREGRKRM 212
>gi|338814827|ref|ZP_08626802.1| endonuclease III [Acetonema longum DSM 6540]
gi|337273132|gb|EGO61794.1| endonuclease III [Acetonema longum DSM 6540]
Length = 209
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + RL T E++ S+ L +LI G + KAK+I
Sbjct: 32 FEMLVAVVLSAQCTDTRVNLITARLFPRYNTPESMLALSQGQLEELIRDCGLYHAKAKNI 91
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
AS IL Y + +P + L +LPGVG K A++ ++ +G
Sbjct: 92 LAASQILVDRYQSQVPAAFDDLIQLPGVGRKTANVLLSQLFGQ----------------- 134
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P L VD HV R+++RLG K TP + L +P+ W
Sbjct: 135 -------------------PALAVDTHVFRVANRLGLAK-GDTPLAVEQGLMKAIPKEKW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
+ +H L+ G+++CK+++P C C+ +LCP
Sbjct: 175 GQAHHWLIWHGRKVCKARQPLCGQCILAELCP 206
>gi|312898869|ref|ZP_07758257.1| endonuclease III [Megasphaera micronuciformis F0359]
gi|310620031|gb|EFQ03603.1| endonuclease III [Megasphaera micronuciformis F0359]
Length = 215
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++++LS+Q DE VN G E+ + E + D L + I G + +KAK+
Sbjct: 31 FELLVAVVLSAQCTDERVNIVTAGLFPEYA-SPEKMLTLGIDGLEEKIKTCGLYHSKAKN 89
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ IL + Y ++P T + L KLPGVG K A++ ++ +
Sbjct: 90 LSATCRILCEEYQGEVPKTFDELVKLPGVGRKTANVLVSVLY------------------ 131
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+++R+ V TP+ K L+ +P
Sbjct: 132 ------------------DTPAIAVDTHVFRVANRMQ-LAVGTTPDSVEKGLQKAIPVEW 172
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCP 359
WS +H L+ G++ICK+++P CE C D+CP
Sbjct: 173 WSRAHHWLIWHGRRICKARKPLCEDCFQNDICP 205
>gi|163867394|ref|YP_001608588.1| endonuclease III [Bartonella tribocorum CIP 105476]
gi|161017035|emb|CAK00593.1| endonuclease III [Bartonella tribocorum CIP 105476]
Length = 253
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 43/222 (19%)
Query: 145 VRRYHVLISLMLSSQTKD-EVNHAA--MGRLKEHGLTIENICNTSEDVLGKLIIPVGFWK 201
+ + +L++++LS+Q D VN A + RL + E + E+ + I +G W+
Sbjct: 52 INTFTLLVAVVLSAQATDISVNKATKELFRLADQP---EKMVALGEEEIAHHIRSIGLWR 108
Query: 202 TKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQ 261
KA+++ S+ L Y +P+T E L LPGVG K A++ +N A+G
Sbjct: 109 AKARNVYALSNCLIDQYGGQVPDTCEALMSLPGVGRKTANVVLNVAFGQ----------- 157
Query: 262 PILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESW 321
P L VD H+ R+S+RLG KTPE K+L
Sbjct: 158 -------------------------PTLAVDTHIFRLSNRLGLAP-GKTPEIVEKKLLKI 191
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKK 363
+P +H L+ G+ IC++++P C C+ DLC K
Sbjct: 192 IPVHYLRHAHHWLILHGRYICQARKPQCTQCIIADLCKAASK 233
>gi|91774091|ref|YP_566783.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanococcoides burtonii DSM 6242]
gi|91713106|gb|ABE53033.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 219
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 125 DAPVDAMGWDHSANVDIA------------PEV---RRYHVLISLMLSSQTKDEVNHAAM 169
D+P AM D++AN D PE+ + +LI+ +LS+Q D +
Sbjct: 4 DSPAIAM--DNTANFDRIWSILKKEYPDPQPELDYSNEFELLIATILSAQCTDVQVNKVT 61
Query: 170 GRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELL 229
L +E + DVL K I GF++ K+K+IK S ++ ++N +P+T+E L
Sbjct: 62 NELFRKYTNVEALAAADLDVLEKEIYSTGFYRAKSKNIKRTSQLILSDFNGKVPDTMEEL 121
Query: 230 CKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQL 289
PGV K A++ + +G V GI
Sbjct: 122 TTFPGVARKTANIVLARGFGKVEGIA---------------------------------- 147
Query: 290 CVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSC 349
VD HV R+S +LG T+ P+ ++L + W +++ L+ G+++C +++P C
Sbjct: 148 -VDTHVKRVSGKLGLTE-NTDPKKIEQDLMKLAEQKDWEDLSMTLILHGRRVCDAKKPQC 205
Query: 350 ETCLNKDLCPQG 361
CL LCP
Sbjct: 206 IVCLLSKLCPSS 217
>gi|172036183|ref|YP_001802684.1| endonuclease III [Cyanothece sp. ATCC 51142]
gi|354552981|ref|ZP_08972288.1| endonuclease III [Cyanothece sp. ATCC 51472]
gi|171697637|gb|ACB50618.1| endonuclease III [Cyanothece sp. ATCC 51142]
gi|353554811|gb|EHC24200.1| endonuclease III [Cyanothece sp. ATCC 51472]
Length = 212
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 36/210 (17%)
Query: 149 HVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHIK 208
+L++ +LS+Q DE + L + + N +VL I GF++ KAK+I+
Sbjct: 35 QLLVATILSAQCTDERVNKVTPELFTQFPDAKGLANADREVLETWIRSTGFYRNKAKNIQ 94
Query: 209 MASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPSS 268
A + ++N +P T+E L LPGV K A++ + HA+GI G+
Sbjct: 95 GACQKIVADFNGQVPQTMEELLLLPGVARKTANVVLAHAFGINAGVT------------- 141
Query: 269 RQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLWS 328
VD HV R+S RLG TK P K+L + LP+ W
Sbjct: 142 ----------------------VDTHVKRLSQRLGLTKA-TDPVKIEKDLMALLPQKDWE 178
Query: 329 EVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ ++ G+QICK++ P+C+ C LC
Sbjct: 179 NFSIRIIYHGRQICKARTPNCQDCKLAHLC 208
>gi|110802211|ref|YP_698638.1| endonuclease III [Clostridium perfringens SM101]
gi|110682712|gb|ABG86082.1| endonuclease III [Clostridium perfringens SM101]
Length = 209
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 39/206 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D+ VN G K++ +++ S++ L I +G ++ KAK+
Sbjct: 29 FQLLVATILSAQTTDKKVNEVTKGLFKDYP-DVDSFLTISQEELEDRIKQIGLYRNKAKN 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
+ M LK+N+ ++P T+E + L G G K A++ +++A+G
Sbjct: 88 LIMMVRQLKENFGGEVPKTMEGITSLAGAGRKTANVVLSNAFG----------------- 130
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD HV R+S+R+G E T K+L+ LP+
Sbjct: 131 -------------------VPSIAVDTHVFRVSNRIGLAHSDNVLE-TEKQLQKELPKKE 170
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETC 352
WS +HLL+ G++ C +++P C+ C
Sbjct: 171 WSLAHHLLIFHGRRCCMARKPKCDIC 196
>gi|226225941|ref|YP_002760047.1| putative DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27]
gi|226089132|dbj|BAH37577.1| putative DNA glycosylase/AP lyase [Gemmatimonas aurantiaca T-27]
Length = 246
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 36/214 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L + +LS+Q D + L E + N + + +++ GF++ KAK +
Sbjct: 65 FELLSATILSAQCTDVRVNMVTPALFARFPNPETLANAPLEEVEEIVRTTGFFRAKAKSL 124
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ L +++ D+P +I L LPGVG K A++ + +A+GI GI
Sbjct: 125 VGMAKALVRDHAGDVPRSIAELVPLPGVGRKTANVILGNAFGINEGI------------- 171
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
VD HV R++ RLG T+ P +EL P W
Sbjct: 172 ----------------------VVDTHVQRLARRLGLTRE-PDPVGIERELMPLFPRDAW 208
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
++++HLL+ G++ C +++P+C+ C+ D+CP
Sbjct: 209 AQLSHLLIWHGRRTCFARKPACDRCVLADVCPSA 242
>gi|158319946|ref|YP_001512453.1| endonuclease III [Alkaliphilus oremlandii OhILAs]
gi|158140145|gb|ABW18457.1| endonuclease III [Alkaliphilus oremlandii OhILAs]
Length = 210
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 39/216 (18%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+QT D+ VN KE+ T++ ++ L I +G ++ KAKH
Sbjct: 29 FQLLVATILSAQTTDKKVNEVTKDLFKEYP-TLDEFLLLTQAELENRIKQIGLYRNKAKH 87
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
I LK+ +N ++PNT++ + L G G K A++ +++A+G
Sbjct: 88 IYTMCRQLKEEFNGEVPNTMDGITSLAGAGRKTANVVLSNAFG----------------- 130
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
+P + VD HV R+S+R+G DT +L+ + + L
Sbjct: 131 -------------------VPSIAVDTHVFRVSNRIGLANA-DNVLDTELQLQKAISKKL 170
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGK 362
WS +HL++ G++ C ++ P+C C+ KD C K
Sbjct: 171 WSLAHHLIIFHGRRCCYARNPNCGECVIKDYCKYYK 206
>gi|403238043|ref|ZP_10916629.1| endonuclease III [Bacillus sp. 10403023]
Length = 219
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L E T E+ S + L I +G ++ KAK+I
Sbjct: 31 FELVIAVSLSAQCTDALVNKVTASLFEKYKTPEDYLAVSLEELQNDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L ++Y +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCQMLLEDYGGILPQDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWKDSVLEVEKTLMKKVPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P CE C ++C +GKK +
Sbjct: 175 SATHHRMIFFGRYHCKAQNPQCEICPLLEVCREGKKRM 212
>gi|431295256|ref|ZP_19507144.1| endonuclease III [Enterococcus faecium E1626]
gi|430581346|gb|ELB19791.1| endonuclease III [Enterococcus faecium E1626]
Length = 225
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 36/230 (15%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + A L T + + S D + I +G ++ KAK+I
Sbjct: 31 FELLIAVILSAQATDVSVNKATPDLFASFPTPDALAEASIDEIILKIKTIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L + ++ +P + E L LPGVG K A++ + A+G
Sbjct: 91 KACAQQLIERFDGQVPTSREELMSLPGVGRKTANVVLGDAFG------------------ 132
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP + VD HV R+S RL K+ T + + L +P+ LW
Sbjct: 133 ------------------IPAIAVDTHVERVSKRLRICKLDATVMEVEETLMRKVPQELW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAERVKKSPKKRK 377
+ +H L+ FG+ C ++ P CE C +C GK + + K KKR+
Sbjct: 175 VKTHHTLIFFGRYHCTARNPKCEVCPLLSICQDGKNRMRLKEKTLKKKRR 224
>gi|423555585|ref|ZP_17531888.1| endonuclease III [Bacillus cereus MC67]
gi|401196989|gb|EJR03927.1| endonuclease III [Bacillus cereus MC67]
Length = 215
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLFRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN +P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCQMLLDDYNGKVPEDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYYCKAQRPQCEECRLLEICREGKKRM 212
>gi|387929504|ref|ZP_10132181.1| endonuclease III [Bacillus methanolicus PB1]
gi|387586322|gb|EIJ78646.1| endonuclease III [Bacillus methanolicus PB1]
Length = 218
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+++LS+Q D + + L + T E+ N + L I +G ++ KAK+I
Sbjct: 31 FELLIAVLLSAQCTDALVNKVTKNLFKKYKTPEDYLNVPLEELQNDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L Y +P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCRMLIDEYGGMVPTDRDELTKLPGVGRKTANVVVSVAFGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG + + + K L +P+ W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMKKVPKEEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P CE C DLC +GKK +
Sbjct: 175 SITHHRMIFFGRYHCKAQNPQCEVCPLLDLCREGKKRM 212
>gi|42557689|emb|CAF28664.1| putative endonuclease III [uncultured crenarchaeote]
Length = 219
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI +LS++T+DE + L + I+ I + I +GF+ KAK I
Sbjct: 39 FKILIGTILSARTRDENTTRVLKYLFDKFRDIDGISKAELKDIRDSIHSIGFYNIKAKRI 98
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K +L + +++ +P+ +E L LPGVG K A+ + +A+ QP
Sbjct: 99 KQVVQLLIEKFDSKVPSNLEELLTLPGVGRKTANCVLVYAFN-----------QP----- 142
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
IP VDVHVHRIS+RLG K E+T EL + + + +W
Sbjct: 143 -----------------AIP---VDVHVHRISNRLGIVNTRKV-EETELELCNIIDKEMW 181
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
EVN V +GQ +C +P C C K +C
Sbjct: 182 IEVNDTFVTYGQNVCLPIKPKCNICQLKKMC 212
>gi|415726092|ref|ZP_11470593.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
00703Dmash]
gi|388063965|gb|EIK86533.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
00703Dmash]
Length = 223
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+QT D+ ++ L + ++ S + + +I P+GF++ KA+H+
Sbjct: 36 FELLIATVLSAQTTDKRVNSVTPELFDTFPDSHSLSEASVEQVESIIKPLGFYRVKAQHV 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ ++ +P+ +E L LPGVG K A++ +A+G+
Sbjct: 96 IALSLRLESAFHGVVPSKMEDLTSLPGVGRKTANVVRGNAFGL----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW------TKVFKTPEDTRKELESW 321
P VD HV R++ RLGW K + PE KE+ S+
Sbjct: 139 -------------------PGFPVDTHVIRVTGRLGWRKDCNKPKKYANPESIEKEITSY 179
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ W+ ++H L+ G++IC ++ P C C K CP
Sbjct: 180 FDPADWANLSHRLILHGRKICTARNPKCALCPLKTTCPSS 219
>gi|229096138|ref|ZP_04227111.1| endonuclease III [Bacillus cereus Rock3-29]
gi|229102250|ref|ZP_04232959.1| endonuclease III [Bacillus cereus Rock3-28]
gi|229115094|ref|ZP_04244504.1| endonuclease III [Bacillus cereus Rock1-3]
gi|407704017|ref|YP_006827602.1| hypothetical protein MC28_0781 [Bacillus thuringiensis MC28]
gi|423380548|ref|ZP_17357832.1| endonuclease III [Bacillus cereus BAG1O-2]
gi|423443580|ref|ZP_17420486.1| endonuclease III [Bacillus cereus BAG4X2-1]
gi|423446169|ref|ZP_17423048.1| endonuclease III [Bacillus cereus BAG5O-1]
gi|423466671|ref|ZP_17443439.1| endonuclease III [Bacillus cereus BAG6O-1]
gi|423536068|ref|ZP_17512486.1| endonuclease III [Bacillus cereus HuB2-9]
gi|423538688|ref|ZP_17515079.1| endonuclease III [Bacillus cereus HuB4-10]
gi|423544926|ref|ZP_17521284.1| endonuclease III [Bacillus cereus HuB5-5]
gi|423625368|ref|ZP_17601146.1| endonuclease III [Bacillus cereus VD148]
gi|228668234|gb|EEL23666.1| endonuclease III [Bacillus cereus Rock1-3]
gi|228681151|gb|EEL35319.1| endonuclease III [Bacillus cereus Rock3-28]
gi|228687098|gb|EEL41003.1| endonuclease III [Bacillus cereus Rock3-29]
gi|401132249|gb|EJQ39891.1| endonuclease III [Bacillus cereus BAG5O-1]
gi|401177272|gb|EJQ84464.1| endonuclease III [Bacillus cereus HuB4-10]
gi|401183101|gb|EJQ90218.1| endonuclease III [Bacillus cereus HuB5-5]
gi|401255048|gb|EJR61273.1| endonuclease III [Bacillus cereus VD148]
gi|401631300|gb|EJS49097.1| endonuclease III [Bacillus cereus BAG1O-2]
gi|402412666|gb|EJV45019.1| endonuclease III [Bacillus cereus BAG4X2-1]
gi|402415381|gb|EJV47705.1| endonuclease III [Bacillus cereus BAG6O-1]
gi|402461493|gb|EJV93206.1| endonuclease III [Bacillus cereus HuB2-9]
gi|407381702|gb|AFU12203.1| endonuclease III [Bacillus thuringiensis MC28]
Length = 215
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++P + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H L+ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRLIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|15605969|ref|NP_213346.1| endonuclease III [Aquifex aeolicus VF5]
gi|2983139|gb|AAC06742.1| endonuclease III [Aquifex aeolicus VF5]
Length = 232
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 37/221 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L+ +L++Q D+V + + T ++I + + L + + + F++ KAK I
Sbjct: 48 FQLLVMAILAAQESDKVVNKVSKEFFKKYKTPQDIARANLEELEEDLKHINFYRRKAKLI 107
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
K + L + Y ++P ++ L KLPGVG K A++ + A+ +
Sbjct: 108 KECCEKLIELYKGEVPKSVGELVKLPGVGRKTANMVIGGAYNL----------------- 150
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HVHR+ R+ +K K P+ EL +P+ LW
Sbjct: 151 -------------------PAIIVDRHVHRVVERISLSKQ-KNPDKMEMELSEIVPQELW 190
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKELAER 368
++ + LL+ G+ ICK++ P CE C DLC G+K L R
Sbjct: 191 TKFSLLLLNHGKTICKARNPECEKCPILDLCEYGQKNLKGR 231
>gi|415728037|ref|ZP_11471640.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
6119V5]
gi|388065563|gb|EIK88045.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
6119V5]
Length = 223
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +LI+ +LS+QT D+ ++ L + ++ S + + +I P+GF++ KA+HI
Sbjct: 36 FELLIATVLSAQTTDKRVNSVTPELFDTFPDSHSLSEASVEQVESIIKPLGFYRVKAQHI 95
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
S L+ ++ +P+ +E L LPGVG K A++ +A+G+
Sbjct: 96 IALSLRLESAFHGVVPSRMEDLTSLPGVGRKTANVVRGNAFGL----------------- 138
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGW------TKVFKTPEDTRKELESW 321
P VD HV R++ RLGW K + PE KE+ S+
Sbjct: 139 -------------------PGFPVDTHVIRVTGRLGWRKDCNKPKKYANPESIEKEITSY 179
Query: 322 LPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQG 361
+ W+ ++H L+ G+++C ++ P C C K CP
Sbjct: 180 FDPADWTNLSHRLILHGRKVCTARNPKCALCPLKTTCPSS 219
>gi|239947055|ref|ZP_04698808.1| endonuclease III [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921331|gb|EER21355.1| endonuclease III [Rickettsia endosymbiont of Ixodes scapularis]
Length = 212
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ +L++++LS+Q D + A L E T E I E+ L K I +G + +KAK+I
Sbjct: 30 FTLLVAVILSAQATDVSVNLATKSLFETYDTPEKILELGEEGLKKYIKSIGLFNSKAKNI 89
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
IL NY +PN + L KLPGVG K A++ +N +G
Sbjct: 90 IALCKILISNYQASVPNDFKELVKLPGVGRKTANVVLNCLFG------------------ 131
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
+P + VD HV R++ R+G+ K +PE KEL + E
Sbjct: 132 ------------------MPTMAVDTHVFRVAKRIGFAKG-NSPEIVEKELLQIIDEKWL 172
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
+ ++ L+ G+ ICK+++P C+ C K+ C
Sbjct: 173 THAHYWLILHGRYICKARKPDCDICPIKEYC 203
>gi|423579838|ref|ZP_17555949.1| endonuclease III [Bacillus cereus VD014]
gi|401217293|gb|EJR23987.1| endonuclease III [Bacillus cereus VD014]
Length = 215
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T E+ + S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDVLVNKVTRNLFQKYKTPEDYLSVSLEELQQDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L +YN ++P+ + L KLPGVG K A++ ++ A+GI
Sbjct: 91 QKLCRMLLDDYNGEVPSDRDELTKLPGVGRKTANVVVSVAFGI----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RL K + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLAMCKWKDSVLEVEKTLMKKVPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
+H ++ FG+ CK+QRP CE C ++C +GKK +
Sbjct: 175 GVTHHRMIFFGRYHCKAQRPQCEECRLLEVCREGKKRM 212
>gi|239906969|ref|YP_002953710.1| endonuclease III [Desulfovibrio magneticus RS-1]
gi|239796835|dbj|BAH75824.1| putative endonuclease III [Desulfovibrio magneticus RS-1]
Length = 211
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 46/218 (21%)
Query: 148 YHVLISLMLSSQTKDE-VNHAAMGRLKE----HGLTIENICNTSEDVLGKLIIPVGFWKT 202
Y +L++ +L++Q D VN + L NI ++ P GF++
Sbjct: 32 YELLVATVLAAQCTDARVNTVTPEFFRRWPDPAALAKANIGEVE-----AVVHPTGFFRQ 86
Query: 203 KAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQP 262
K K++ IL + +N IP T+ L LPGV K A++ +++A GI GI
Sbjct: 87 KTKNLVTTGKILVERHNGRIPATMAELTALPGVARKTANIVLSNALGINVGIA------- 139
Query: 263 ILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWL 322
VD HV R+S RLG T + P K+L
Sbjct: 140 ----------------------------VDTHVRRLSFRLGLTTS-ENPVIIEKDLMPLF 170
Query: 323 PESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
++ E+NHLLV FG+++CK++RP C C+ D+CP+
Sbjct: 171 APEVYGEINHLLVLFGREVCKARRPQCGDCVLNDVCPK 208
>gi|282898312|ref|ZP_06306303.1| Endonuclease III/Nth [Raphidiopsis brookii D9]
gi|281196843|gb|EFA71748.1| Endonuclease III/Nth [Raphidiopsis brookii D9]
Length = 218
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 44/216 (20%)
Query: 149 HVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKA 204
+L++ +LS+Q DE V GR + ++++ L L+ GF++ KA
Sbjct: 40 QLLVATILSAQCTDERVNKVTPDLFGRFPD----VQSLAEADVLELENLVHSTGFYRNKA 95
Query: 205 KHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPIL 264
K+IK A ++ ++N+ +PN +E L KLPGV K A++ + HA+GI G+
Sbjct: 96 KNIKSACTMIVSDFNSTVPNKMEDLLKLPGVARKTANVVLAHAYGINAGVT--------- 146
Query: 265 SPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPE 324
VD HV R++ RLG T + P K+L LP+
Sbjct: 147 --------------------------VDTHVKRLTQRLGLTASTE-PISIEKDLMELLPQ 179
Query: 325 SLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
W + L+ G+ +CK++ PSCE+C D+C +
Sbjct: 180 PEWENWSIRLIYHGRAVCKARSPSCESCDLVDVCAK 215
>gi|319651307|ref|ZP_08005437.1| endonuclease III [Bacillus sp. 2_A_57_CT2]
gi|317397087|gb|EFV77795.1| endonuclease III [Bacillus sp. 2_A_57_CT2]
Length = 218
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 36/218 (16%)
Query: 148 YHVLISLMLSSQTKDEVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKHI 207
+ ++I++ LS+Q D + + L + T ++ N S + L + I +G ++ KAK+I
Sbjct: 31 FELVIAVALSAQCTDALVNKVTKNLFQKYKTPQDYLNVSIEELQEDIRSIGLYRNKAKNI 90
Query: 208 KMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSPS 267
+ +L Y +P + L KLPGVG K A++ ++ A+G+
Sbjct: 91 QKLCRLLLDEYEGVVPRDRDELTKLPGVGRKTANVVVSVAYGV----------------- 133
Query: 268 SRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESLW 327
P + VD HV R+S RLG+ + + + K L +P W
Sbjct: 134 -------------------PAIAVDTHVERVSKRLGFCRWKDSVLEVEKTLMKKVPMDEW 174
Query: 328 SEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQGKKEL 365
S +H ++ FG+ CK+Q P CE C DLC +GKK +
Sbjct: 175 SITHHRMIFFGRYHCKAQNPQCEICPLLDLCREGKKRM 212
>gi|313888481|ref|ZP_07822148.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845510|gb|EFR32904.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 213
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 39/212 (18%)
Query: 148 YHVLISLMLSSQTKD-EVNHAAMGRLKEHGLTIENICNTSEDVLGKLIIPVGFWKTKAKH 206
+ +L++ +LS+Q D VN K++ E+ N L L+ G ++ KAK+
Sbjct: 34 FELLVATILSAQCTDVRVNKVTEEMFKKYNKP-EDFANMDIKTLEGLVKECGLYRNKAKN 92
Query: 207 IKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWGIVTGIGKDESRQPILSP 266
IK +S+++ + +N +P TI+ L KLPGVG K A++ + +G+
Sbjct: 93 IKASSNVILEEFNGKVPETIKDLMKLPGVGKKTANVVASTCFGV---------------- 136
Query: 267 SSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFKTPEDTRKELESWLPESL 326
P + VD HV R+S+R+G+ E T K LE+ +
Sbjct: 137 --------------------PAIAVDTHVFRVSNRIGFVSE-NNVEKTEKALENKIDRKR 175
Query: 327 WSEVNHLLVGFGQQICKSQRPSCETCLNKDLC 358
W++ +HL + G++ C ++ P C+ C KD C
Sbjct: 176 WTKAHHLFIFHGRRCCTARSPKCQACPIKDFC 207
>gi|440681150|ref|YP_007155945.1| endonuclease III [Anabaena cylindrica PCC 7122]
gi|428678269|gb|AFZ57035.1| endonuclease III [Anabaena cylindrica PCC 7122]
Length = 214
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 47/231 (20%)
Query: 134 DHSANVDIAPEVRRYHVLISLMLSSQTKDE----VNHAAMGRLKEHGLTIENICNTSEDV 189
D + ++D + V+ +L++ +LS+Q DE V A GR + EN+
Sbjct: 25 DATCSLDYSTPVQ---LLVATILSAQCTDERVNKVTPALFGRFPDA----ENLAKADLLE 77
Query: 190 LGKLIIPVGFWKTKAKHIKMASDILKKNYNNDIPNTIELLCKLPGVGPKMAHLCMNHAWG 249
L +L+ GF+ KAK+I+ A ++ ++N+ +PN +E L KLPGV K A++ + HA+G
Sbjct: 78 LEELVRSTGFYHNKAKNIQGACRMIVNDFNSIVPNQMEQLLKLPGVARKTANVVLAHAYG 137
Query: 250 IVTGIGKDESRQPILSPSSRQISRSELICVRKCEKKIPQLCVDVHVHRISHRLGWTKVFK 309
I G+ VD HV R+S RLG T
Sbjct: 138 INAGVT-----------------------------------VDTHVKRLSQRLGLT-TNT 161
Query: 310 TPEDTRKELESWLPESLWSEVNHLLVGFGQQICKSQRPSCETCLNKDLCPQ 360
P K+L LP+ W + L+ G+ +CK++ P C C DLC +
Sbjct: 162 EPVGIEKDLMKLLPQPDWENWSIRLIYHGRAVCKARSPGCNVCELADLCAR 212
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,220,320,250
Number of Sequences: 23463169
Number of extensions: 270281484
Number of successful extensions: 732293
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4724
Number of HSP's successfully gapped in prelim test: 1443
Number of HSP's that attempted gapping in prelim test: 719069
Number of HSP's gapped (non-prelim): 11003
length of query: 378
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 234
effective length of database: 8,980,499,031
effective search space: 2101436773254
effective search space used: 2101436773254
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)