BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4003
(535 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 212 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 270
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 271 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 330
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 331 DKAQIHDLVLVGGSTRIPKVQKLLQ 355
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 72/97 (74%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 296 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 355
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAI 254
DFFNG+ LN SINPDE IL GD S +
Sbjct: 356 DFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 392
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 230 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 288
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 289 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 348
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 349 DKAQIHDLVLVGGSTRIPKVQKLLQ 373
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 314 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 373
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNG+ LN SINPDE IL GD S
Sbjct: 374 DFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKS 407
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 211 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 269
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 270 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 329
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 330 DKAQIHDLVLVGGSTRIPKVQKLLQ 354
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 72/97 (74%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 295 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 354
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAI 254
DFFNG+ LN SINPDE IL GD S +
Sbjct: 355 DFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 211 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 269
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 270 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 329
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 330 DKAQIHDLVLVGGSTRIPKVQKLLQ 354
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 72/97 (74%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 295 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 354
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAI 254
DFFNG+ LN SINPDE IL GD S +
Sbjct: 355 DFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENV 391
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 327 DKAQIHDLVLVGGSTRIPKVQKLLQ 351
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 69/91 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 292 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSG 248
DFFNG+ LN SINPDE IL G
Sbjct: 352 DFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 327 DKAQIHDLVLVGGSTRIPKVQKLLQ 351
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 69/91 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 292 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSG 248
DFFNG+ LN SINPDE IL G
Sbjct: 352 DFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 327 DKAQIHDLVLVGGSTRIPKVQKLLQ 351
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 69/91 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 292 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSG 248
DFFNG+ LN SINPDE IL G
Sbjct: 352 DFFNGRDLNKSINPDEAVAYGAAVQAAILXG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 206 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 264
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 265 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 324
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 325 DKAQIHDLVLVGGSTRIPKVQKLLQ 349
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 69/91 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 290 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 349
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSG 248
DFFNG+ LN SINPDE IL G
Sbjct: 350 DFFNGRDLNKSINPDEAVAYGAAVQAAILMG 380
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 130/145 (89%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV+ F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 232 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTA 290
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+A+LEID+L+EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAK+
Sbjct: 291 CERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKM 350
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+Q++LQ
Sbjct: 351 DKAKIHDIVLVGGSTRIPKVQRLLQ 375
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 70/92 (76%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAK+DK IHD+VLVGGS RIPK+Q++LQ
Sbjct: 316 DFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDIVLVGGSTRIPKVQRLLQ 375
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
D+FNG+ LN SINPDE IL GD
Sbjct: 376 DYFNGRDLNKSINPDEAVAYGAAVQAAILMGD 407
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/145 (79%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID+G +F+VK+TAGDTHLGGEDFDNRLV F +EFKRKHKKDI N RAVRRLRTA
Sbjct: 28 SILTIDDG-IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTA 86
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+ASLEID+L EGIDFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 87 CERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 146
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 147 DKAQIHDLVLVGGSTRIPKVQKLLQ 171
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/76 (78%), Positives = 66/76 (86%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPK+QK+LQ
Sbjct: 112 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQ 171
Query: 218 DFFNGKSLNLSINPDE 233
DFFNG+ LN SINPDE
Sbjct: 172 DFFNGRDLNKSINPDE 187
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 109/145 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMT 277
DFFNGK LN SINPDE ILSGD S +QD+LL+DV PLSLGIETAGGVMT
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMT 411
Query: 278 KIVERNSRIPCKQQQTFTEQPSKLP 302
+++RN+ IP KQ QTFT P
Sbjct: 412 VLIKRNTTIPTKQTQTFTTYSDNQP 436
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 357 IPLFQPKSFS-HSRYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP Q ++F+ +S Q V IQV+EGERAMTKDNNLLG F LTGIPPAPRGVP+IEVTFD
Sbjct: 420 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGILNVSA D STGK +ITI NDKGRLSK+DI+RM+ EAEKYKAED+KQR++V++K
Sbjct: 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSK 539
Query: 476 NKLESYAFAVKQAAE 490
N LESYAF +K E
Sbjct: 540 NSLESYAFNMKATVE 554
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/147 (77%), Positives = 128/147 (87%), Gaps = 1/147 (0%)
Query: 4 NGSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLR 63
N S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLR
Sbjct: 206 NVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLR 264
Query: 64 TACERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDA 123
TACERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DA
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 124 KLDKGSIHDVVLVGGSIRIPKIQKMLQ 150
KLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 325 KLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
SVL+ID G +F+VK+TAGDTHLGGEDFDNRLV F +EF+RKH KD+ N RA+RRLRTA
Sbjct: 228 SVLSIDAG-VFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTA 286
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+A+LEID+L EG+DFY+ ITRARFEELC DLFR TL PVE+AL DAKL
Sbjct: 287 CERAKRTLSSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKL 346
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHDVVLVGGS RIPK+QK+LQ
Sbjct: 347 DKAQIHDVVLVGGSTRIPKVQKLLQ 371
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 70/92 (76%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEELC DLFR TL PVE+AL DAKLDK IHDVVLVGGS RIPK+QK+LQ
Sbjct: 312 DFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDVVLVGGSTRIPKVQKLLQ 371
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
DFFNGK LN SINPDE +L GD
Sbjct: 372 DFFNGKELNKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 205 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 263
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 264 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 323
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 324 DKSQIHDIVLVGGSTRIPKIQKLLQ 348
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 289 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 348
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 349 DFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 78/103 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLV 260
DFFNGK LN SINPDE ILSGD S +QD+LL+
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 213 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 271
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 272 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 331
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 332 DKSQIHDIVLVGGSTRIPKIQKLLQ 356
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 297 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 356
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 357 DFFNGKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 71/94 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTS 251
DFFNGK LN SINPDE ILSGD S
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 227 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 285
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 286 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 345
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 346 DKSQIHDIVLVGGSTRIPKIQKLLQ 370
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 311 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 370
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 371 DFFNGKELNKSINPDEAVAYGAAVQAAILS 400
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 109/145 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMT 277
DFFNGK LN SINPDE ILSGD S +QD+LL+DV PLSLGIETAGGVMT
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMT 411
Query: 278 KIVERNSRIPCKQQQTFTEQPSKLP 302
+++RN+ IP KQ QTFT P
Sbjct: 412 VLIKRNTTIPTKQTQTFTTYSDNQP 436
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 357 IPLFQPKSFS-HSRYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP Q ++F+ +S Q V IQV+EGERAMTKDNNLLG F LTGIPPAPRGVP+IEVTFD
Sbjct: 420 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGILNVSA D STGK +ITI NDKGRLSK+DI+RM+ EAEKYKAED+KQR++V++K
Sbjct: 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSK 539
Query: 476 NKLESYAFAVKQAAE 490
N LESYAF +K E
Sbjct: 540 NSLESYAFNMKATVE 554
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 126/145 (86%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ++G +F+VKSTAGDTHLGGEDFDNR+V F EFKRKHKKDI N RAVRRLRTA
Sbjct: 208 SILTTEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTA 266
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 267 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 326
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 327 DKSQIHDIVLVGGSTRIPKIQKLLQ 351
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/145 (67%), Positives = 109/145 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 292 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 351
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMT 277
DFFNGK LN SINPDE ILSGD S +QD+LL+DV PLSLGIETAGGVMT
Sbjct: 352 DFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMT 411
Query: 278 KIVERNSRIPCKQQQTFTEQPSKLP 302
+++RN+ IP KQ QTFT P
Sbjct: 412 VLIKRNTTIPTKQTQTFTTYSDNQP 436
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 357 IPLFQPKSFS-HSRYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP Q ++F+ +S Q V IQV+EGERAMTKDNNLLG F LTGIPPAPRGVP+IEVTFD
Sbjct: 420 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 479
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGILNVSA D STGK +ITI NDKGRLSK+DI+RM+ EAEKYKAED+KQR++V++K
Sbjct: 480 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSK 539
Query: 476 NKLE 479
N LE
Sbjct: 540 NSLE 543
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V+ A+EFKRKHKKDI N RAVRRLRTA
Sbjct: 229 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTA 287
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EG+DFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 288 CERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKL 347
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DKG I ++VLVGGS RIPKIQK+LQ
Sbjct: 348 DKGQIQEIVLVGGSTRIPKIQKLLQ 372
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 69/92 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDKG I ++VLVGGS RIPKIQK+LQ
Sbjct: 313 DFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQ 372
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
DFFNGK LN SINPDE IL GD
Sbjct: 373 DFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 128/145 (88%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR V+ A+EFKRKHKKDI N RAVRRLRTA
Sbjct: 211 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRXVSHLAEEFKRKHKKDIGPNKRAVRRLRTA 269
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EG+DFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 270 CERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKL 329
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DKG I ++VLVGGS RIPKIQK+LQ
Sbjct: 330 DKGQIQEIVLVGGSTRIPKIQKLLQ 354
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 69/92 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDKG I ++VLVGGS RIPKIQK+LQ
Sbjct: 295 DFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQ 354
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
DFFNGK LN SINPDE IL GD
Sbjct: 355 DFFNGKELNKSINPDEAVAYGAAVQAAILIGD 386
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKR H KDI N RAVRRLRTA
Sbjct: 205 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLRTA 263
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 264 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 323
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 324 DKSQIHDIVLVGGSTRIPKIQKLLQ 348
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 68/90 (75%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DFY+ ITRARFEEL DLFR TL PVE+AL DAKLDK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 289 DFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQ 348
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFFNGK LN SINPDE ILS
Sbjct: 349 DFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L I++G +F+VKSTAGDTHLGGEDFDNR+V F EFKR H KDI N RAVRRL TA
Sbjct: 205 SILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLATA 263
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
CERAKRTLSSST+AS+EID+L+EGIDFY+ ITRARFEEL DLFR TL PVE+AL DAKL
Sbjct: 264 CERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKL 323
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
DK IHD+VLVGGS RIPKIQK+LQ
Sbjct: 324 DKSQIHDIVLVGGSTRIPKIQKLLQ 348
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/146 (66%), Positives = 122/146 (83%), Gaps = 2/146 (1%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKK-DILANTRAVRRLRT 64
S+L I++G +F+VK+TAGDTHLGGEDFDNRLV F +FKRK++ D+ N RA+RRLRT
Sbjct: 224 SLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTTNARALRRLRT 282
Query: 65 ACERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAK 124
CERAKRTLSSST+A++E+D+L+EGID+ I+RARFEELC D FR TLAPVE+ L DA
Sbjct: 283 QCERAKRTLSSSTQATIELDSLYEGIDYSVAISRARFEELCADYFRATLAPVEKVLKDAG 342
Query: 125 LDKGSIHDVVLVGGSIRIPKIQKMLQ 150
+DK S+HDVVLVGGS RIPK+Q ++Q
Sbjct: 343 MDKRSVHDVVLVGGSTRIPKVQALIQ 368
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 65/92 (70%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
D+ I+RARFEELC D FR TLAPVE+ L DA +DK S+HDVVLVGGS RIPK+Q ++Q
Sbjct: 309 DYSVAISRARFEELCADYFRATLAPVEKVLKDAGMDKRSVHDVVLVGGSTRIPKVQALIQ 368
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
+FFNGK +INPDE IL+G+
Sbjct: 369 EFFNGKEPCKAINPDEAVAYGAAVQAAILNGE 400
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 357 IPLFQPKSFS-HSRYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP Q ++F+ +S Q V IQV+EGERAMTKDNNLLG F LTGIPPAPRGVP+IEVTFD
Sbjct: 36 IPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFD 95
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGILNVSA D STGK +ITI NDKGRLSK+DI+RM+ EAEKYKAED+KQR++V++K
Sbjct: 96 IDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSK 155
Query: 476 NKLE 479
N LE
Sbjct: 156 NSLE 159
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 251 SSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
S +QD+LL+DV PLSLGIETAGGVMT +++RN+ IP KQ QTFT
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 45
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 357 IPLFQPKSFS-HSRYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP K+F+ ++ Q V+IQV+EGERAMT+DN+ LGTF L+GIPPAPRGVP+IEVTF+
Sbjct: 29 IPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFN 88
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGILNVSA+D STGK+ RITIQN+KGRL++ DIDRM+ EA++++ ED +QRERV A+
Sbjct: 89 IDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQAR 148
Query: 476 NKLE 479
N+LE
Sbjct: 149 NQLE 152
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 32/43 (74%)
Query: 261 DVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTEQPSKLPS 303
DVAPLSLGIETAGGVMT +++RN+RIP K +TFT P
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPG 46
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 104/137 (75%)
Query: 13 GSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRT 72
G ++ VKST+G+THLGG+DFD L+ F EFK+K DI + RA+RRLRTA ERAKRT
Sbjct: 220 GGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRT 279
Query: 73 LSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHD 132
LSS T+ ++E+D+L +G DF S +TRARFE+L LF+ TL PVE+ L DAK+ K I +
Sbjct: 280 LSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDE 339
Query: 133 VVLVGGSIRIPKIQKML 149
VVLVGGS RIPK+QK+L
Sbjct: 340 VVLVGGSTRIPKVQKLL 356
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 61/90 (67%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DF S +TRARFE+L LF+ TL PVE+ L DAK+ K I +VVLVGGS RIPK+QK+L
Sbjct: 298 DFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDEVVLVGGSTRIPKVQKLLS 357
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
DFF+GK L SINPDE IL+
Sbjct: 358 DFFDGKQLEKSINPDEAVAYGAAVQGAILT 387
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID G +F+V +T GDTHLGGEDFD R++ F +K+K KD+ + RAV++LR
Sbjct: 231 SLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRRE 289
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+AKR LSS +A +EI++ +EG DF +TRA+FEEL MDLFR T+ PV++ L D+ L
Sbjct: 290 VEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDL 349
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
K I ++VLVGGS RIPKIQ++++
Sbjct: 350 KKSDIDEIVLVGGSTRIPKIQQLVK 374
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 63/92 (68%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DF +TRA+FEEL MDLFR T+ PV++ L D+ L K I ++VLVGGS RIPKIQ++++
Sbjct: 315 DFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVK 374
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSGD 249
+FFNGK + INPDE +LSGD
Sbjct: 375 EFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 406
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L ID G +F+V +T GDTHLGGEDFD R++ F +K+K KD+ + RAV++LR
Sbjct: 210 SLLTIDNG-VFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRRE 268
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+AKR LSS +A +EI++ +EG DF +TRA+FEEL MDLFR T+ PV++ L D+ L
Sbjct: 269 VEKAKRALSSQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDL 328
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
K I ++VLVGGS RIPKIQ++++
Sbjct: 329 KKSDIDEIVLVGGSTRIPKIQQLVK 353
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DF +TRA+FEEL MDLFR T+ PV++ L D+ L K I ++VLVGGS RIPKIQ++++
Sbjct: 294 DFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVK 353
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILSG 248
+FFNGK + INPDE +LSG
Sbjct: 354 EFFNGKEPSRGINPDEAVAYGAAVQAGVLSG 384
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 97/124 (78%), Gaps = 1/124 (0%)
Query: 357 IPLFQPKSFSHS-RYQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP + + FS + Q V I+V+EGERAM+KDNNLLG F LTGIPPAPRGVP+IEVTF
Sbjct: 29 IPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFA 88
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
LDANGIL VSA D TGK+E ITI NDKGRL++++IDRM+ EAEK+ +ED + +V ++
Sbjct: 89 LDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESR 148
Query: 476 NKLE 479
NKLE
Sbjct: 149 NKLE 152
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 261 DVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
DV L+LGIET GGVMT +++RN+ IP K+ Q F+
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFS 38
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L+I+ G +F+V++T+GDTHLGGEDFD ++V FK+KH D+ N +A+ +L+
Sbjct: 217 SLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKRE 275
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+AKR LSS +EID+ +GID +TRA+FEEL +DLF++TL PVE+ L D+ L
Sbjct: 276 AEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGL 335
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
+K + D+VLVGGS RIPK+Q++L+
Sbjct: 336 EKKDVDDIVLVGGSTRIPKVQQLLE 360
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
D +TRA+FEEL +DLF++TL PVE+ L D+ L+K + D+VLVGGS RIPK+Q++L+
Sbjct: 301 DLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLE 360
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
+F+GK + INPDE +LS
Sbjct: 361 SYFDGKKASKGINPDEAVAYGAAVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L+I+ G +F+V++T+GDTHLGGEDFD ++V FK+KH D+ N +A+ +L+
Sbjct: 221 SLLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKRE 279
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+AKR LSS +EID+ +GID +TRA+FEEL +DLF++TL PVE+ L D+ L
Sbjct: 280 AEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGL 339
Query: 126 DKGSIHDVVLVGGSIRIPKIQKMLQ 150
+K + D+VLVGGS RIPK+Q++L+
Sbjct: 340 EKKDVDDIVLVGGSTRIPKVQQLLE 364
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 61/90 (67%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
D +TRA+FEEL +DLF++TL PVE+ L D+ L+K + D+VLVGGS RIPK+Q++L+
Sbjct: 305 DLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLE 364
Query: 218 DFFNGKSLNLSINPDEXXXXXXXXXXXILS 247
+F+GK + INPDE +LS
Sbjct: 365 SYFDGKKASKGINPDEAVAYGAAVQAGVLS 394
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 138/293 (47%), Gaps = 71/293 (24%)
Query: 6 SVLAIDE---GSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRL 62
S++ IDE F+V +T GDTHLGGEDFD+RL+ + +EFK+
Sbjct: 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKK---------------- 246
Query: 63 RTACERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALND 122
+GID R + L M ++ A
Sbjct: 247 ------------------------DQGIDL-------RNDPLAMQRLKE-------AAEK 268
Query: 123 AKLDKGSIHDVVLVGGSIRIPKIQKMLQIPPLIFRDFYSKITRARFEELCMDLFRQTLAP 182
AK++ S + +P I P + K+TRA+ E L DL +++ P
Sbjct: 269 AKIELSSAQQT-----DVNLPYITADATGP----KHMNIKVTRAKLESLVEDLVNRSIEP 319
Query: 183 VERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEXXXXXXXXX 242
++ AL DA L I DV+LVGG R+P +QK + +FF GK +NPDE
Sbjct: 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQ 378
Query: 243 XXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
+L+GD ++DVLL+DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 379 GGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 427
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 37/304 (12%)
Query: 252 SAIQDVLLVDVAPLSLGIETAGGVMTKI-----VERNSRIPCKQQQT---FTEQPSKLPS 303
S ++D++ + PL + ++ AG ++ I V +R+P Q++ F ++P K
Sbjct: 307 SLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK--- 363
Query: 304 SVETPVLPSKMSCWPDAIGGQ-----------LRFTPECCHYSELSIMYVGNITTWRTNS 352
V P + A+ G L TP L I +G + T
Sbjct: 364 ----DVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLS-----LGIETMGGVMTTLIAK 414
Query: 353 HFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIE 411
+ IP + FS + Q+AVTI V +GER DN LG FNL GI PAPRG+P+IE
Sbjct: 415 N-TTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIE 473
Query: 412 VTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRER 471
VTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I +M+ +AE D K E
Sbjct: 474 VTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMVRDAEANAEADRKFDEL 532
Query: 472 VAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLK 531
V +N+ + + ++ E++G KL DKT++ A +A T L+G +K E +++
Sbjct: 533 VQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQ 589
Query: 532 TLQQ 535
L Q
Sbjct: 590 ELAQ 593
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 102/144 (70%), Gaps = 2/144 (1%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I VG + T + IP + + FS + Q+AV+I ++EGER M DN+ LG F
Sbjct: 10 LGIETVGGVMTKLIGRN-TVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNF 68
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
++TGIPPAPRGVP+IEVTF++D NGIL+VSA+D TG ++TI ND RLS +DI+RM+
Sbjct: 69 DVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMI 128
Query: 456 AEAEKYKAEDDKQRERVAAKNKLE 479
+A+K+ A+D Q+E+V ++N+LE
Sbjct: 129 NDADKFAADDQAQKEKVESRNELE 152
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 261 DVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
DV PL+LGIET GGVMTK++ RN+ IP K+ Q F+
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFS 38
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G + T N + IP + + FS + Q V I+V +GER M DN LLG F
Sbjct: 30 LGIETLGGVFTKLINRN-TTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQF 88
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
L GIPPAPRGVP+IEVTFD+DANGI++VSAKD TG+ ++I IQ+ G LSKDDI+ M+
Sbjct: 89 TLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGG-LSKDDIENMV 147
Query: 456 AEAEKYKAEDDKQRERVAAKNKLES 480
AEKY ED +++ERV A N E
Sbjct: 148 KNAEKYAEEDRRKKERVEAVNMAEG 172
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 260 VDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
+DV PLSLGIET GGV TK++ RN+ IP K+ Q F+
Sbjct: 23 MDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFS 58
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G + T + IP + FS + Q+AVTI V +GER DN LG F
Sbjct: 11 LGIETMGGVMTTLIAKN-TTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQF 69
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
NL GI PAPRG+P+IEVTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I +M+
Sbjct: 70 NLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMV 128
Query: 456 AEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWL 515
+AE D K E V +N+ + + ++ E++G KL DKT++ A +A T L
Sbjct: 129 RDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETAL 188
Query: 516 EGNSLAEKEEFEDRLKTLQQ 535
+G +K E +++ L Q
Sbjct: 189 KGE---DKAAIEAKMQELAQ 205
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 257 VLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
VLL+DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 39
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 96/144 (66%), Gaps = 3/144 (2%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G I T + + IP + + FS + Q V I+VF+GER M N LLG F
Sbjct: 10 LGIETLGGIMT-KLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQF 68
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
+L GIPPAPRGVP++EVTFD+DANGI+NVSA+D TGK ++I IQ+ G LSKD I+ M+
Sbjct: 69 SLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQIENMI 127
Query: 456 AEAEKYKAEDDKQRERVAAKNKLE 479
EAEK AED K++E V N+ E
Sbjct: 128 KEAEKNAAEDAKRKELVEVINQAE 151
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 261 DVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
DV PLSLGIET GG+MTK++ RN+ IP K+ Q F+
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFS 38
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G + T + IP + FS + Q+AVTI V +GER DN LG F
Sbjct: 11 LGIETMGGVMTTLIAKN-TTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQF 69
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
NL GI PAPRG+P+IEVTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I +M+
Sbjct: 70 NLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMV 128
Query: 456 AEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWL 515
+AE D K E V +N+ + + ++ E++G KL DKT++ A +A T L
Sbjct: 129 RDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETAL 188
Query: 516 EGNSLAEKEEFEDRLKTLQQ 535
+G +K E +++ L Q
Sbjct: 189 KGE---DKAAIEAKMQELAQ 205
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 257 VLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
VLL+DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 39
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 120/200 (60%), Gaps = 6/200 (3%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G + T + IP + FS + Q+AV+I V +GER DN LG F
Sbjct: 11 LGIETMGGVMTTLIAKN-TTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAADNKSLGQF 69
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
NL GI PAPRG+P+IEVTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I +M+
Sbjct: 70 NLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMV 128
Query: 456 AEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWL 515
+AE D K E V +N+ + + ++ E++G KL DKT++ A +A T L
Sbjct: 129 RDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETAL 188
Query: 516 EGNSLAEKEEFEDRLKTLQQ 535
+G +K E +++ L Q
Sbjct: 189 KGE---DKAAIEAKMQELAQ 205
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 257 VLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
VLL+DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 39
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 152/304 (50%), Gaps = 34/304 (11%)
Query: 252 SAIQDVLLVDVAPLSLGIETAGGVMTKI-----VERNSRIPCKQQQT---FTEQPSKLPS 303
S ++D++ + PL + ++ AG ++ I V +R P Q++ F ++P K
Sbjct: 307 SLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFFGKEPRK--- 363
Query: 304 SVETPVLPSKMSCWPDAIGGQ-----------LRFTPECCHYSELSIMYVGNITTWRTNS 352
V P + A+ G L TP L I G + T
Sbjct: 364 ----DVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLS-----LGIETXGGVXTTLIAK 414
Query: 353 HFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIE 411
+ IP + FS + Q+AVTI V +GER DN LG FNL GI PAPRG P+IE
Sbjct: 415 NTT-IPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGXPQIE 473
Query: 412 VTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRER 471
VTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I + + +AE D K E
Sbjct: 474 VTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKXVRDAEANAEADRKCEEL 532
Query: 472 VAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLK 531
V +N+ + + ++ E++G KL DKT++ A +A T L+G A E L
Sbjct: 533 VQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKXQELA 592
Query: 532 TLQQ 535
+ Q
Sbjct: 593 QVSQ 596
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Query: 162 KITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN 221
K+TRA+ E L DL +++ P++ AL DA L I DV+LVGG R P +QK + +FF
Sbjct: 299 KVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKVAEFF- 357
Query: 222 GKSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVE 281
GK +NPDE +L+GD ++DVLL+DV PLSLGIET GGV T ++
Sbjct: 358 GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETXGGVXTTLIA 413
Query: 282 RNSRIPCKQQQTFT 295
+N+ IP K Q F+
Sbjct: 414 KNTTIPTKHSQVFS 427
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 15/155 (9%)
Query: 6 SVLAIDE---GSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRL 62
S++ IDE F+V +T GDTHLGGEDFD+RL+ + +EFK+ D+ + A +RL
Sbjct: 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAXQRL 262
Query: 63 RTACERAKRTLSSSTEASLEIDAL--------HEGIDFYSKITRARFEELCMDLFRQTLA 114
+ A E+AK LSS+ + + + + H I K+TRA+ E L DL +++
Sbjct: 263 KEAAEKAKIELSSAQQTDVNLPYITADATGPKHXNI----KVTRAKLESLVEDLVNRSIE 318
Query: 115 PVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKML 149
P++ AL DA L I DV+LVGG R P +QK +
Sbjct: 319 PLKVALQDAGLSVSDIDDVILVGGQTRXPXVQKKV 353
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 337 LSIMYVGNITTWRTNSHFNPIPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTF 395
L I +G + T + IP + FS + Q+AVTI V +GER DN LG F
Sbjct: 29 LGIETMGGVMTTLIAKN-TTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQF 87
Query: 396 NLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRML 455
NL GI PAPRG+P+IEVTFD+DA+GIL+VSAKD ++GK ++ITI+ G L++D+I +M+
Sbjct: 88 NLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-LNEDEIQKMV 146
Query: 456 AEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKL 496
+AE D K E V +N+ + + ++ E++G KL
Sbjct: 147 RDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKL 187
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 248 GDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
G ++DVLL+DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 10 GSIEGRVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 57
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 5/149 (3%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+L + +G +F+VK+TAGD HLGG+DFD ++ + ++FK++H D+ + A++RL+ A
Sbjct: 176 SILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDA 234
Query: 66 CERAKRTLSSSTEASLE---IDALHEG-IDFYSKITRARFEELCMDLFRQTLAPVERALN 121
E+AK+ LS T+ + I A G + +TRA+FEEL L +T+ PV +AL
Sbjct: 235 AEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQ 294
Query: 122 DAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 150
DA L I V+LVGGS RIP +Q+ ++
Sbjct: 295 DAGLTPADIDKVILVGGSTRIPAVQEAIK 323
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
Query: 163 ITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNG 222
+TRA+FEEL L +T+ PV +AL DA L I V+LVGGS RIP +Q+ ++ G
Sbjct: 269 LTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-G 327
Query: 223 KSLNLSINPDEXXXXXXXXXXXILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVER 282
K + +NPDE +++G+ ++DV+L+DV PLSLGIET GGV TK++ER
Sbjct: 328 KEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIER 383
Query: 283 NSRIPCKQQQTFT 295
N+ IP + Q FT
Sbjct: 384 NTTIPTSKSQVFT 396
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
Query: 357 IPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP + + F+ + Q V I V +GER M DN LG F LTGIPPAPRGVP+IEVTFD
Sbjct: 387 IPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFD 446
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAK 475
+DANGI++V AKD T K + ITI++ G LS+++I RM+ EAE+ D K++E +
Sbjct: 447 IDANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKEAAELR 505
Query: 476 NK 477
N+
Sbjct: 506 NE 507
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S++A +G L +V TA D H GG DFD + FADEFK K+K DI N +A R+ TA
Sbjct: 214 SIMAFKKGQL-KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 272
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+ K+ LS++T A ++++ +D S+++R EEL L + PV +AL AKL
Sbjct: 273 AEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKL 332
Query: 126 DKGSIHDVVLVGGSIRIPKIQKML 149
+ V ++GG+ RIP +++ +
Sbjct: 333 SAEEVDFVEIIGGTTRIPTLKQSI 356
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S++A +G L +V TA D H GG DFD + FADEFK K+K DI N +A R+ TA
Sbjct: 211 SIMAFKKGQL-KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 269
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+ K+ LS++T A ++++ +D S+++R EEL L + PV +AL AKL
Sbjct: 270 AEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKL 329
Query: 126 DKGSIHDVVLVGGSIRIPKIQKML 149
+ V ++GG+ RIP +++ +
Sbjct: 330 SAEEVDFVEIIGGTTRIPTLKQSI 353
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S++A +G L +V TA D H GG DFD + FADEFK K+K DI N +A R+ TA
Sbjct: 212 SIMAFKKGQL-KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 270
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+ K+ LS++T A ++++ +D S+++R EEL L + PV +AL AKL
Sbjct: 271 AEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKL 330
Query: 126 DKGSIHDVVLVGGSIRIPKIQKML 149
+ V ++GG+ RIP +++ +
Sbjct: 331 SAEEVDFVEIIGGTTRIPTLKQSI 354
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 392 LGTFNLTGI--PPAPRGVPKIEVTFDLDANGILNV----------SAKDSSTGKAERITI 439
+ + +TG+ P VP +++ D +G+ + + D+ T K + +TI
Sbjct: 459 IANWEITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTI 517
Query: 440 QNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKL-SD 498
L ++ ++ + + A+D E KN LE Y + ++ E+ + SD
Sbjct: 518 VAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASD 577
Query: 499 ADKTSVSQACSATLTWL 515
A+KT + + WL
Sbjct: 578 AEKTKLQGMLNKAEEWL 594
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 15/153 (9%)
Query: 6 SVLAIDE---GSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRL 62
S++ IDE F+V +T GDTHLGGEDFD+RL+ + +EFK+ D+ + A++RL
Sbjct: 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRL 262
Query: 63 RTACERAKRTLSSSTEASLEIDAL--------HEGIDFYSKITRARFEELCMDLFRQTLA 114
+ A E+AK LSS+ + + + + H I K+TRA+ E L DL +++
Sbjct: 263 KEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNI----KVTRAKLESLVEDLVNRSIE 318
Query: 115 PVERALNDAKLDKGSIHDVVLVGGSIRIPKIQK 147
++ AL DA L I DV+LVGG R+P +QK
Sbjct: 319 LLKVALQDAGLSVSDIDDVILVGGQTRMPMVQK 351
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 6 SVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 65
S+ A +G L +V TA D H GG DFD + FADEFK K+K DI N +A R+ TA
Sbjct: 212 SIXAFKKGQL-KVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 270
Query: 66 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL 125
E+ K+ LS++T A ++++ +D S+++R EEL L + PV +AL AKL
Sbjct: 271 AEKLKKVLSANTNAPFSVESVXNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKL 330
Query: 126 DKGSIHDVVLVGGSIRIPKIQKML 149
+ V ++GG+ RIP +++ +
Sbjct: 331 SAEEVDFVEIIGGTTRIPTLKQSI 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
D S+++R EEL L + PV +AL AKL + V ++GG+ RIP +++ +
Sbjct: 296 DVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSIS 355
Query: 218 DFFNGKSLNLSINPDE 233
+ F GK L+ ++N DE
Sbjct: 356 EAF-GKPLSTTLNQDE 370
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 392 LGTFNLTGI--PPAPRGVPKIEVTFDLDANGILNV----------SAKDSSTGKAERITI 439
+ + +TG+ P VP +++ D +G+ + + D+ T K + +TI
Sbjct: 459 IANWEITGVQLPEGQDSVP-VKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTI 517
Query: 440 QNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKL-SD 498
L ++ ++ + + A+D E KN LE Y + ++ E+ + SD
Sbjct: 518 VAHTFGLDAKKLNELIEKENEXLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASD 577
Query: 499 ADKTSVSQACSATLTWL 515
A+KT + + WL
Sbjct: 578 AEKTKLQGXLNKAEEWL 594
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 357 IPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP + FS + Q+AVTI V +GER DN LG FNL GI PAPRG+P+IEVTFD
Sbjct: 26 IPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFD 85
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKG 444
+DA+GIL+VSAKD ++GK ++ITI+ G
Sbjct: 86 IDADGILHVSAKDKNSGKEQKITIKASSG 114
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 261 DVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
DV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 35
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 357 IPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP + FS + Q+AVTI V +GER DN LG FNL GI PAPRG+P+IEVTFD
Sbjct: 46 IPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFD 105
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKG 444
+DA+GIL+VSAKD ++GK ++ITI+ G
Sbjct: 106 IDADGILHVSAKDKNSGKEQKITIKASSG 134
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 259 LVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
+VDV PLSLGIET GGVMT ++ +N+ IP K Q F+
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFS 55
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 2 RTNGSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKH--KKDILANTRAV 59
R++ +VLA G ++ + +T D G D L+ F+ EF +K+ KD N R++
Sbjct: 216 RSDVTVLASRSG-MYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSL 274
Query: 60 RRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERA 119
+LR E KR LS ST AS +++L +G+DF S I R R+E + +F VE A
Sbjct: 275 AKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESA 334
Query: 120 LNDAKLDKGSIHDVVLVGGSIRIPKI 145
+ A LD + +V++ GG+ P+I
Sbjct: 335 VKKAGLDPLDVDEVIMSGGTSNTPRI 360
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 158 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ 217
DF S I R R+E + +F VE A+ A LD + +V++ GG+ P+I +
Sbjct: 306 DFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFR 365
Query: 218 DFF 220
F
Sbjct: 366 YIF 368
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 357 IPLFQPKSFSHSR-YQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFD 415
IP+ + + F+ + Q A++I V +GER + +D L F L GIP P G I VTF
Sbjct: 27 IPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAHIRVTFQ 86
Query: 416 LDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQR----ER 471
+DA+G+L+V+A + STG I ++ G L+ +I M+ ++ Y +D K R ++
Sbjct: 87 VDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDSEIASMIKDSMSYAEQDVKARMLAEQK 145
Query: 472 VAAKNKLES 480
V A LES
Sbjct: 146 VEAARVLES 154
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%)
Query: 260 VDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFT 295
+DV PLSLG+ET GG++ K++ RN+ IP + Q FT
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFT 36
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 470 ERVAAKNKLESYAFAVKQAAEDSG--SKLSDADKTSVSQACSATLTWLEGNSLAEKEEFE 527
ERV+AKN LESYAF K A ED G K+S+ADK V C ++WL+ N+LAEK+EFE
Sbjct: 6 ERVSAKNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFE 65
Query: 528 DRLKTLQQ 535
+ K L+Q
Sbjct: 66 HKRKELEQ 73
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of
Human Heat Shock Protein 70
Length = 75
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 473 AAKNKLESYAFAVKQAAEDSG--SKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRL 530
+AKN LESYAF +K A ED G K+S+ADK V C ++WL+ N+LAEK+EFE +
Sbjct: 2 SAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKR 61
Query: 531 KTLQQ 535
K L+Q
Sbjct: 62 KELEQ 66
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|B Chain B, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|C Chain C, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|D Chain D, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|E Chain E, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|F Chain F, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
Length = 120
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 478 LESYAFAVKQAAEDSG--SKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQ 534
LESYAF +KQ ED K+S DK + C L WL+ N AEKEEFE + K L+
Sbjct: 23 LESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLE 81
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 476 NKLESYAFAVKQAAEDSG--SKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTL 533
+ LESYAF K ED K++D DK + C+ ++WL+ N AEKEEFE + K L
Sbjct: 7 HXLESYAFNXKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKEL 66
Query: 534 QQ 535
++
Sbjct: 67 EK 68
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 167 RFEELCMDL----FRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNG 222
R E++C L F ERAL A +KG +V+LVGG ++++ML+ G
Sbjct: 215 RLEDICYSLQEYAFSMLTEITERAL--AHTNKG---EVMLVGGVAANNRLREMLKAMCEG 269
Query: 223 KSLNLSINPDE 233
++++ + P E
Sbjct: 270 QNVDFYVPPKE 280
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 167 RFEELCMDL----FRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNG 222
R E++C L F ERAL A +KG +V+LVGG ++++ML+ G
Sbjct: 220 RLEDICYSLQEYAFSMLTEITERAL--AHTNKG---EVMLVGGVAANNRLREMLKAMCEG 274
Query: 223 KSLNLSINPDE 233
++++ + P E
Sbjct: 275 QNVDFYVPPKE 285
>pdb|4DUT|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4DUT|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis
pdb|4EK2|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4EK2|B Chain B, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Deoxyadenosine
Monophosphate
pdb|4HR2|A Chain A, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
pdb|4HR2|B Chain B, Structure Of Nucleoside Diphosphate Kinase (Ndk) From
Burkholderia Thailandensis Bound To Adp
Length = 145
Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 374 VTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSS 430
V IQV EGE A+ K+ +L+G T A +G + + +DAN + A +++
Sbjct: 76 VMIQVLEGEDAILKNRDLMGA---TDPKKAEKGTIRADFADSIDANAVHGSDAPETA 129
>pdb|1I7Q|A Chain A, Anthranilate Synthase From S. Marcescens
pdb|1I7Q|C Chain C, Anthranilate Synthase From S. Marcescens
pdb|1I7S|A Chain A, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
pdb|1I7S|C Chain C, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
Length = 519
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 404 PRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKA 463
PRG + + + DLD + + + + AE + + + L+++D+ R+ +Y
Sbjct: 330 PRG-RRADGSLDLDLDSRIELEMRTDHKELAEHLMLVD----LARNDLARICQAGSRY-- 382
Query: 464 EDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQAC 508
VA K++ Y+F + + G+ +D D QAC
Sbjct: 383 --------VADLTKVDRYSFVMHLVSRVVGTLRADLDVLHAYQAC 419
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,432,065
Number of Sequences: 62578
Number of extensions: 574686
Number of successful extensions: 1424
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1246
Number of HSP's gapped (non-prelim): 166
length of query: 535
length of database: 14,973,337
effective HSP length: 103
effective length of query: 432
effective length of database: 8,527,803
effective search space: 3684010896
effective search space used: 3684010896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)