Your job contains 1 sequence.
>psy401
MSTNTAAAPTATSSEVMDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQE
GKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFL
GWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATML
FIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYL
KEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDL
NQFVNKFNVLFDKQMLGRKLRGILYF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy401
(326 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050417-289 - symbol:cops6 "COP9 constitutiv... 1058 5.7e-107 1
UNIPROTKB|A6QQ21 - symbol:COPS6 "COP9 signalosome complex... 1052 2.5e-106 1
UNIPROTKB|E7EM64 - symbol:COPS6 "COP9 signalosome complex... 1050 4.0e-106 1
MGI|MGI:1349439 - symbol:Cops6 "COP9 (constitutive photom... 1050 4.0e-106 1
UNIPROTKB|F1MG10 - symbol:COPS6 "COP9 signalosome complex... 1048 6.5e-106 1
UNIPROTKB|Q7L5N1 - symbol:COPS6 "COP9 signalosome complex... 1048 6.5e-106 1
UNIPROTKB|A7TX81 - symbol:COPS6 "COP9 signalosome complex... 1048 6.5e-106 1
RGD|1309919 - symbol:Cops6 "COP9 signalosome subunit 6" s... 1047 8.3e-106 1
FB|FBgn0028837 - symbol:CSN6 "COP9 complex homolog subuni... 1001 6.2e-101 1
DICTYBASE|DDB_G0293180 - symbol:csn6 "Mov34/MPN/PAD-1 fam... 605 5.7e-59 1
TAIR|locus:2131493 - symbol:CSN6B "AT4G26430" species:370... 499 2.3e-54 2
TAIR|locus:2177601 - symbol:CSN6A "AT5G56280" species:370... 511 5.2e-49 1
ASPGD|ASPL0000051695 - symbol:csnF species:162425 "Emeric... 199 2.1e-30 3
UNIPROTKB|G4MZL5 - symbol:MGG_01432 "Uncharacterized prot... 221 2.2e-29 3
TAIR|locus:2074653 - symbol:MEE34 "AT3G11270" species:370... 310 1.0e-27 1
WB|WBGene00000818 - symbol:csn-6 species:6239 "Caenorhabd... 307 2.2e-27 1
UNIPROTKB|G4NCJ9 - symbol:MGG_01059 "26S proteasome regul... 306 2.8e-27 1
TAIR|locus:2166449 - symbol:RPN8A "AT5G05780" species:370... 301 9.4e-27 1
ZFIN|ZDB-GENE-030131-5541 - symbol:psmd7 "proteasome (pro... 299 1.5e-26 1
FB|FBgn0002787 - symbol:Rpn8 "Regulatory particle non-ATP... 298 1.9e-26 1
POMBASE|SPCC1682.10 - symbol:rpn8 "19S proteasome regulat... 293 6.6e-26 1
MGI|MGI:1351511 - symbol:Psmd7 "proteasome (prosome, macr... 292 8.4e-26 1
UNIPROTKB|P51665 - symbol:PSMD7 "26S proteasome non-ATPas... 291 1.1e-25 1
WB|WBGene00004464 - symbol:rpn-8 species:6239 "Caenorhabd... 291 1.1e-25 1
UNIPROTKB|O61792 - symbol:rpn-8 "Protein RPN-8" species:6... 291 1.1e-25 1
UNIPROTKB|Q3ZBD0 - symbol:PSMD7 "26S proteasome non-ATPas... 290 1.4e-25 1
RGD|1306902 - symbol:Psmd7 "proteasome (prosome, macropai... 290 1.4e-25 1
ASPGD|ASPL0000029143 - symbol:AN5121 species:162425 "Emer... 280 1.6e-24 1
CGD|CAL0002371 - symbol:RPN8 species:5476 "Candida albica... 261 1.6e-22 1
DICTYBASE|DDB_G0279633 - symbol:psmD7 "26S proteasome non... 261 1.6e-22 1
UNIPROTKB|Q59YL2 - symbol:RPN8 "Likely 26S proteasome reg... 261 1.6e-22 1
SGD|S000005787 - symbol:RPN8 "non-ATPase regulatory subun... 260 2.1e-22 1
MGI|MGI:1913335 - symbol:Eif3f "eukaryotic translation in... 258 3.4e-22 1
UNIPROTKB|E1C050 - symbol:EIF3F "Uncharacterized protein"... 255 7.0e-22 1
UNIPROTKB|B3KSH1 - symbol:EIF3F "HCG1784554, isoform CRA_... 252 1.5e-21 1
UNIPROTKB|O00303 - symbol:EIF3F "Eukaryotic translation i... 252 1.5e-21 1
UNIPROTKB|A5A6I3 - symbol:EIF3F "Eukaryotic translation i... 252 1.5e-21 1
UNIPROTKB|Q4R5B8 - symbol:EIF3F "Eukaryotic translation i... 252 1.5e-21 1
UNIPROTKB|E1BLZ8 - symbol:EIF3F "Uncharacterized protein"... 252 1.8e-21 1
DICTYBASE|DDB_G0293254 - symbol:eif3F "eukaryotic transla... 231 2.5e-19 1
UNIPROTKB|B4DXI8 - symbol:PSMD7 "26S proteasome non-ATPas... 214 1.6e-17 1
POMBASE|SPBC4C3.07 - symbol:SPBC4C3.07 "translation initi... 199 2.5e-14 1
TAIR|locus:2061206 - symbol:EIF2 "AT2G39990" species:3702... 186 1.0e-12 1
UNIPROTKB|C9JQK5 - symbol:COPS6 "COP9 signalosome complex... 162 1.4e-11 1
UNIPROTKB|B4DEW9 - symbol:EIF3F "Eukaryotic translation i... 160 2.4e-11 1
FB|FBgn0033069 - symbol:CG8335 species:7227 "Drosophila m... 172 5.3e-11 1
FB|FBgn0037270 - symbol:CG9769 species:7227 "Drosophila m... 160 1.5e-09 1
UNIPROTKB|A4R0E5 - symbol:MGG_10653 "Eukaryotic translati... 162 2.1e-09 1
ASPGD|ASPL0000055955 - symbol:AN10182 species:162425 "Eme... 141 4.7e-07 1
>ZFIN|ZDB-GENE-050417-289 [details] [associations]
symbol:cops6 "COP9 constitutive photomorphogenic
homolog subunit 6 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0060026 "convergent
extension" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021551 "central nervous system morphogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-050417-289 GO:GO:0007420 GO:GO:0009953 GO:GO:0060026
GO:GO:0021551 KO:K12179 InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 EMBL:BC093188 IPI:IPI00570094
RefSeq:NP_001017768.1 UniGene:Dr.42675 ProteinModelPortal:Q567F8
PRIDE:Q567F8 GeneID:550465 KEGG:dre:550465 NextBio:20879709
Uniprot:Q567F8
Length = 297
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 190/297 (63%), Positives = 251/297 (84%)
Query: 29 MAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELV 88
MA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+ VQV+GALIG Q GR +E+ NSFEL+
Sbjct: 1 MASGVTGSVSVALHPLVILNISDHWIRIRSQEGRAVQVVGALIGKQEGRNIEVMNSFELL 60
Query: 89 YNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPI 148
++ +ED++ I+++YY KEEQFKQVF +++FLGWYTTG + ++ DI +HKQ+CEI ESP+
Sbjct: 61 FHTVEDQIHIDKEYYYTKEEQFKQVFKEMEFLGWYTTGGSPDQSDIHIHKQVCEIIESPL 120
Query: 149 FLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNND 208
FLKLNP H++LPVSV+ES+ID++ GEATMLF ELPYT+ TEEAER+GVDHVARM+
Sbjct: 121 FLKLNPMTKHTDLPVSVFESVIDIISGEATMLFAELPYTLATEEAERIGVDHVARMTATG 180
Query: 209 SGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVL 268
+GE+S VAEHL AQ++AIKMLH R+K++L+Y+K V++G +P NH+ILRE NAL HRLPVL
Sbjct: 181 TGENSTVAEHLIAQHSAIKMLHSRVKVILEYVKAVQAGEVPFNHEILREANALCHRLPVL 240
Query: 269 DNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQMLGRKLRGILY 325
+ FKTDFY QCNDV L+ YLGTITK CN +NQF+NKFNVL+D+Q +GR++RG+ +
Sbjct: 241 NTLKFKTDFYDQCNDVGLMAYLGTITKTCNSMNQFINKFNVLYDRQGIGRRMRGLFF 297
>UNIPROTKB|A6QQ21 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000253002 KO:K12179 InterPro:IPR024969
Pfam:PF13012 EMBL:BC149601 IPI:IPI00867272 RefSeq:NP_001095433.1
UniGene:Bt.52796 ProteinModelPortal:A6QQ21 STRING:A6QQ21
PRIDE:A6QQ21 GeneID:512756 KEGG:bta:512756 CTD:10980
HOVERGEN:HBG107770 InParanoid:A6QQ21 OrthoDB:EOG4JDH76
NextBio:20870547 Uniprot:A6QQ21
Length = 324
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 198/309 (64%), Positives = 251/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+P+QVIGALIG Q G
Sbjct: 17 MEVDAAVV-PSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 75
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +LDFLGWYTTG + DI V
Sbjct: 76 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHV 135
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 136 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 195
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 196 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 255
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 256 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 315
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 316 GRRMRGLFF 324
>UNIPROTKB|E7EM64 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005634 InterPro:IPR024969
Pfam:PF13012 HGNC:HGNC:21749 ChiTaRS:COPS6 EMBL:AC073842
IPI:IPI00924791 ProteinModelPortal:E7EM64 SMR:E7EM64
Ensembl:ENST00000418625 ArrayExpress:E7EM64 Bgee:E7EM64
Uniprot:E7EM64
Length = 326
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 199/309 (64%), Positives = 252/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD A SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+PVQVIGALIG Q G
Sbjct: 20 MEVD--AAVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEG 77
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 78 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 137
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 138 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 197
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 198 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 257
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 258 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 317
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 318 GRRMRGLFF 326
>MGI|MGI:1349439 [details] [associations]
symbol:Cops6 "COP9 (constitutive photomorphogenic) homolog,
subunit 6 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349439 GO:GO:0005737 GO:GO:0008180 eggNOG:COG1310
GO:GO:0010388 HOGENOM:HOG000253002 KO:K12179 OMA:IGKQKGR
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:AF071315 EMBL:BC004664
EMBL:BC014286 IPI:IPI00131873 RefSeq:NP_036132.1 UniGene:Mm.3981
ProteinModelPortal:O88545 SMR:O88545 STRING:O88545
PhosphoSite:O88545 PaxDb:O88545 PRIDE:O88545
Ensembl:ENSMUST00000019638 GeneID:26893 KEGG:mmu:26893
InParanoid:O88545 NextBio:304723 Bgee:O88545 Genevestigator:O88545
GermOnline:ENSMUSG00000019494 Uniprot:O88545
Length = 324
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 198/309 (64%), Positives = 252/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD A SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+P+QVIGALIG Q G
Sbjct: 18 MEVD--AAVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 75
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 76 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 135
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 136 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 195
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 196 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 255
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 256 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 315
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 316 GRRMRGLFF 324
>UNIPROTKB|F1MG10 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9913 "Bos taurus" [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008180
GO:GO:0010388 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012
IPI:IPI00867272 UniGene:Bt.52796 GeneTree:ENSGT00530000063075
EMBL:DAAA02058286 PRIDE:F1MG10 Ensembl:ENSBTAT00000003725
Uniprot:F1MG10
Length = 324
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 197/309 (63%), Positives = 251/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+P+QVIGALIG Q G
Sbjct: 17 MEVDAAVV-PSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 75
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 76 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 135
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 136 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 195
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 196 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 255
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 256 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 315
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 316 GRRMRGLFF 324
>UNIPROTKB|Q7L5N1 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008180 "signalosome"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 GO:GO:0019048 EMBL:CH236956 EMBL:CH471091
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000253002
KO:K12179 OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012 CTD:10980
HOVERGEN:HBG107770 OrthoDB:EOG4JDH76 MEROPS:M67.972 EMBL:BC002520
EMBL:U70735 IPI:IPI00163230 RefSeq:NP_006824.2 UniGene:Hs.15591
ProteinModelPortal:Q7L5N1 SMR:Q7L5N1 DIP:DIP-32655N IntAct:Q7L5N1
MINT:MINT-5005311 STRING:Q7L5N1 PhosphoSite:Q7L5N1 DMDM:55976470
PaxDb:Q7L5N1 PeptideAtlas:Q7L5N1 PRIDE:Q7L5N1 DNASU:10980
Ensembl:ENST00000303904 GeneID:10980 KEGG:hsa:10980 UCSC:uc003usu.3
GeneCards:GC07P099686 HGNC:HGNC:21749 HPA:HPA044315 MIM:614729
neXtProt:NX_Q7L5N1 PharmGKB:PA134919933 InParanoid:Q7L5N1
PhylomeDB:Q7L5N1 ChiTaRS:COPS6 GenomeRNAi:10980 NextBio:41718
ArrayExpress:Q7L5N1 Bgee:Q7L5N1 CleanEx:HS_COPS6
Genevestigator:Q7L5N1 GermOnline:ENSG00000168090 Uniprot:Q7L5N1
Length = 327
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 198/309 (64%), Positives = 251/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+PVQVIGALIG Q G
Sbjct: 20 MEVDAAVV-PSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEG 78
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 79 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 138
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 139 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 198
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 199 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 258
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 259 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 318
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 319 GRRMRGLFF 327
>UNIPROTKB|A7TX81 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 GO:GO:0008180 KO:K12179
InterPro:IPR024969 Pfam:PF13012 CTD:10980 HOVERGEN:HBG107770
EMBL:EF468513 RefSeq:NP_001098769.1 UniGene:Ssc.8359
ProteinModelPortal:A7TX81 GeneID:100125954 KEGG:ssc:100125954
Uniprot:A7TX81
Length = 323
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 197/309 (63%), Positives = 251/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+P+QVIGALIG Q G
Sbjct: 16 MEVDAAVV-PSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 74
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E+++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 75 RNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 134
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 135 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 194
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 195 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 254
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 255 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 314
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 315 GRRMRGLFF 323
>RGD|1309919 [details] [associations]
symbol:Cops6 "COP9 signalosome subunit 6" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0008180
"signalosome" evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1309919
GO:GO:0008180 GO:GO:0010388 KO:K12179 InterPro:IPR024969
Pfam:PF13012 CTD:10980 OrthoDB:EOG4JDH76
GeneTree:ENSGT00530000063075 EMBL:CH474107 IPI:IPI00870712
RefSeq:NP_001100599.1 UniGene:Rn.35643 Ensembl:ENSRNOT00000001820
GeneID:304343 KEGG:rno:304343 UCSC:RGD:1309919 NextBio:652918
Uniprot:D3ZI16
Length = 344
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 198/309 (64%), Positives = 251/309 (81%)
Query: 17 MDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVG 76
M+VD A SVMA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+P+QVIGALIG Q G
Sbjct: 38 MEVD--AAVPSVMASGVTGSVSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEG 95
Query: 77 RKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKV 136
R +E+ NSFEL+ + +E ++II+++YY KEEQFKQVF +L+FLGWYTTG + DI V
Sbjct: 96 RNIEVMNSFELLSHTVEKKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHV 155
Query: 137 HKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
HKQ+CEI ESP+FLKLNP H++LPVSV+ES+ID++ GEATMLF EL YT+ TEEAER+
Sbjct: 156 HKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERI 215
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM+ SGE+S VAEHL AQ++AIKMLH R+K++L+Y+K E+G +P NH+ILR
Sbjct: 216 GVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILR 275
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL H LPVL FKTDFY QCNDV L+ YLGTITK CN +NQFVNKFNVL+D+Q +
Sbjct: 276 EAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGI 335
Query: 317 GRKLRGILY 325
GR++RG+ +
Sbjct: 336 GRRMRGLFF 344
>FB|FBgn0028837 [details] [associations]
symbol:CSN6 "COP9 complex homolog subunit 6" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome" evidence=ISS]
[GO:0050821 "protein stabilization" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] [GO:0046331
"lateral inhibition" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:AE014297 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 GO:GO:0048477 GO:GO:0046331
GO:GO:0008180 eggNOG:COG1310 GO:GO:0000338 GO:GO:0019781 KO:K12179
OMA:IGKQKGR InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 EMBL:AY070607 RefSeq:NP_524451.1
UniGene:Dm.2377 PDB:4E0Q PDBsum:4E0Q ProteinModelPortal:Q9VCY3
SMR:Q9VCY3 IntAct:Q9VCY3 MINT:MINT-991251 STRING:Q9VCY3
MEROPS:M67.972 PaxDb:Q9VCY3 PRIDE:Q9VCY3 EnsemblMetazoa:FBtr0084265
GeneID:42661 KEGG:dme:Dmel_CG6932 CTD:42661 FlyBase:FBgn0028837
InParanoid:Q9VCY3 OrthoDB:EOG4KSN1G PhylomeDB:Q9VCY3
GenomeRNAi:42661 NextBio:829940 Bgee:Q9VCY3 GermOnline:CG6932
Uniprot:Q9VCY3
Length = 341
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 191/309 (61%), Positives = 242/309 (78%)
Query: 18 DVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGR 77
D + P G + A G +GS+ +SLHPLVIMNISEH+TR RAQ G+P QV GALIG Q GR
Sbjct: 33 DQNPQPQGNIMAAAGTSGSVTISLHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGR 92
Query: 78 KLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVH 137
+EI NSFEL ++I DE +IN+DYY KE+Q+KQVF DLDF+GWYTTGD DIK+
Sbjct: 93 NIEIMNSFELKTDVIGDETVINKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQ 152
Query: 138 KQICEINESPIFLKLNPHPIH-SNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERM 196
+QI INE PI L+LNP +LP+ ++ES+IDLV GEATMLF+ L YT+ TEEAER+
Sbjct: 153 RQIAAINECPIMLQLNPLSRSVDHLPLKLFESLIDLVDGEATMLFVPLTYTLATEEAERI 212
Query: 197 GVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILR 256
GVDHVARM++N+SGE S+VAEHL AQ +AIKML+ RIKI+L Y+++VE+G L N +ILR
Sbjct: 213 GVDHVARMTSNESGEKSVVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILR 272
Query: 257 ELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQML 316
E AL HRLPV+ PAF+ +FYTQCNDV LI+YLGT+TKGCND++ FVNKFN+L+D+Q
Sbjct: 273 EAYALCHRLPVMQVPAFQEEFYTQCNDVGLISYLGTLTKGCNDMHHFVNKFNMLYDRQGS 332
Query: 317 GRKLRGILY 325
R++RG+ Y
Sbjct: 333 ARRMRGLYY 341
>DICTYBASE|DDB_G0293180 [details] [associations]
symbol:csn6 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IEA;IDA] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0293180 GO:GO:0045335
GenomeReviews:CM000155_GR GO:GO:0008180 eggNOG:COG1310
EMBL:AAFI02000199 KO:K12179 OMA:IGKQKGR InterPro:IPR024969
Pfam:PF13012 EMBL:DQ309434 RefSeq:XP_629327.1
ProteinModelPortal:Q54C92 STRING:Q54C92 PRIDE:Q54C92
EnsemblProtists:DDB0233105 GeneID:8629051 KEGG:ddi:DDB_G0293180
ProtClustDB:CLSZ2429325 Uniprot:Q54C92
Length = 309
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 126/297 (42%), Positives = 192/297 (64%)
Query: 22 TPAGKSVMAKGVTGS-IHVSLHPLVIMNISEHYTRRRAQEGKP--VQVIGALIGIQVGRK 78
T A K V+ K S + V LHPLV++NIS+H+TR + Q +VIG ++G+Q GR
Sbjct: 10 TDANKLVLEKSANSSGLEVDLHPLVLINISDHFTRTKVQSNYQDNCRVIGVILGVQNGRN 69
Query: 79 LEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHK 138
+EI NSFE+VY ++ +++++ +Y K EQ ++ D LGWY+TG V++ DI +HK
Sbjct: 70 VEICNSFEMVYATVDKQLVLDIEYLRKKYEQLFPLY---DLLGWYSTGSQVSKDDILLHK 126
Query: 139 QICEINESPIFLKLNPH-PIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMG 197
QI E NESP++L L+ P +LPV +YES + +V E T +F++ PY I T EAER+G
Sbjct: 127 QISEHNESPLYLMLDTDSPKSKDLPVIIYESELHIVNDEPTTIFVKTPYKIQTGEAERIG 186
Query: 198 VDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRE 257
V+H+A+++ + S E S + HL +NAI ML++R+K L DYL+ V+ LP +ILR+
Sbjct: 187 VNHIAKVTPSGS-EGSGLTSHLFTMHNAISMLNIRVKALSDYLQAVKEKRLPYEQNILRK 245
Query: 258 LNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQ 314
++L ++LP +D FK + + NDV L+TYL +ITK LN ++K+ V +KQ
Sbjct: 246 ASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASITKTSASLNDTIDKYLVSNEKQ 302
>TAIR|locus:2131493 [details] [associations]
symbol:CSN6B "AT4G26430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010387 "signalosome assembly" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0008180 "signalosome" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0007275
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009585
EMBL:AL161565 EMBL:AL022223 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000338 GO:GO:0010387 HOGENOM:HOG000253002 KO:K12179
ProtClustDB:CLSN2689622 InterPro:IPR024969 Pfam:PF13012
EMBL:AF434762 EMBL:AF395064 EMBL:AY080638 EMBL:BT002345
EMBL:AY087556 IPI:IPI00531332 PIR:T05061 RefSeq:NP_567746.1
UniGene:At.26288 UniGene:At.28451 UniGene:At.75239
ProteinModelPortal:Q8W1P0 SMR:Q8W1P0 IntAct:Q8W1P0 STRING:Q8W1P0
PaxDb:Q8W1P0 PRIDE:Q8W1P0 EnsemblPlants:AT4G26430.1 GeneID:828749
KEGG:ath:AT4G26430 TAIR:At4g26430 InParanoid:Q8W1P0 OMA:AMITNCT
PhylomeDB:Q8W1P0 Genevestigator:Q8W1P0 GermOnline:AT4G26430
Uniprot:Q8W1P0
Length = 317
Score = 499 (180.7 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 99/252 (39%), Positives = 161/252 (63%)
Query: 65 QVIGALIGIQVGRKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYT 124
+V G +IG+Q GR +EI NSFEL+++ D + +R + K+E +K+VF D LGWY+
Sbjct: 57 RVYGCVIGLQRGRTVEIFNSFELIFDPALDTL--DRSFLEKKQELYKKVFPDFYVLGWYS 114
Query: 125 TGDTVNELDIKVHKQICEINESPIFLKLNPHPIHS--NLPVSVYESIIDLVGGEATMLFI 182
TG E D+ +HK + +INESP+++ LNP H+ +LPV++YES ++ G +F+
Sbjct: 115 TGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIFV 174
Query: 183 ELPYTIITEEAERMGVDHVARMSNNDSGESSL-VAEHLTAQYNAIKMLHVRIKILLDYLK 241
YTI T EAER+ VDHVA + +D G ++ +A HLT ++AIKML+ RI++L ++
Sbjct: 175 HTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIV 234
Query: 242 EVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLN 301
++ G P + +LR++++L LP ++ F +F + ND L++YL IT +++N
Sbjct: 235 AMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMN 294
Query: 302 QFVNKFNVLFDK 313
+ V+KFN +DK
Sbjct: 295 EVVDKFNTAYDK 306
Score = 80 (33.2 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 29 MAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKP 63
MA + + LHPLV++NIS+H+TR + Q P
Sbjct: 1 MAPSSSSGLTFKLHPLVMLNISDHFTRVKTQLNPP 35
>TAIR|locus:2177601 [details] [associations]
symbol:CSN6A "AT5G56280" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein
catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0007275
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006511
GO:GO:0009585 GO:GO:0008180 eggNOG:COG1310 GO:GO:0010387
EMBL:AY048692 EMBL:AF395063 EMBL:AB026656 EMBL:BT004034
IPI:IPI00519357 RefSeq:NP_568839.1 UniGene:At.20191
ProteinModelPortal:Q8W206 SMR:Q8W206 IntAct:Q8W206 STRING:Q8W206
PaxDb:Q8W206 PRIDE:Q8W206 EnsemblPlants:AT5G56280.1 GeneID:835727
KEGG:ath:AT5G56280 TAIR:At5g56280 HOGENOM:HOG000253002
InParanoid:Q8W206 KO:K12179 OMA:IGKQKGR PhylomeDB:Q8W206
ProtClustDB:CLSN2689622 Genevestigator:Q8W206 GermOnline:AT5G56280
InterPro:IPR024969 Pfam:PF13012 Uniprot:Q8W206
Length = 317
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 106/281 (37%), Positives = 173/281 (61%)
Query: 37 IHVSLHPLVIMNISEHYTRR-RAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDE 95
+ L+P + S H + A + +V G +IG+Q GR +EI NSFEL+Y+
Sbjct: 28 VKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVEIFNSFELLYD--PST 85
Query: 96 MIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++R + K+E +K+VF D LGWY+TG E D+ +HK + +INESP+++ LNP
Sbjct: 86 QTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPA 145
Query: 156 PIHS--NLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
H+ +LPV++YES + ++ G ++F YTI T EAER+ VDHVA + +D G ++
Sbjct: 146 INHTQKDLPVTIYESELHVIDGIPQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAA 205
Query: 214 L-VAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPA 272
+A HLT ++AIKML+ RI++L L ++ G ++ +LR++++L RLP +++
Sbjct: 206 TQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMESER 265
Query: 273 FKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDK 313
F+ +F + ND LITYL IT +++N+ V+KFN +D+
Sbjct: 266 FQDNFLMEYNDKLLITYLAMITNCSSNMNEMVDKFNTAYDR 306
>ASPGD|ASPL0000051695 [details] [associations]
symbol:csnF species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 EMBL:BN001307 GO:GO:0008180 EMBL:AACD01000036
eggNOG:NOG264163 RefSeq:XP_659837.1 STRING:Q5BB47
EnsemblFungi:CADANIAT00008919 GeneID:2875096 KEGG:ani:AN2233.2
HOGENOM:HOG000172990 OMA:TGEAEMI OrthoDB:EOG4GTPPP Uniprot:Q5BB47
Length = 386
Score = 199 (75.1 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 53/162 (32%), Positives = 91/162 (56%)
Query: 27 SVMA-KGVTGSIHVSLHPLVIMNISEHYTRR--RAQEGKPVQVIGALIGIQVGRKLEIKN 83
S+++ K +H+ LHPL ++ IS+H TR R+Q+G P+ +G L+G GR++ +++
Sbjct: 7 SILSQKSSDSGLHIQLHPLALLTISDHITRHAARSQQG-PI--VGGLLGQHNGREITVEH 63
Query: 84 SFELVYNIIED-EMIINRDYYTLKEEQFKQVFC--DLDFLGWYTT----GDTVNELDIKV 136
FE V I + E + +++ + +QFK V LD +GW++T G T L I
Sbjct: 64 GFECVVEIGPNGEAQLPNEWFVDRVKQFKDVHKVPALDLIGWWSTAPPSGPTTAHLPI-- 121
Query: 137 HKQICEI-NESPIFLKLNPHPIHS------NLPVSVYESIID 171
H+QI + NES +FL +P + LP+++YES+ +
Sbjct: 122 HRQILQNHNESAVFLTFHPSQVQGASQSQGKLPLTIYESVYE 163
Score = 125 (49.1 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 211 ESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEV---------ESGTLPVNHDILRELNAL 261
E L+A L + NAI+ L RI ++ YL + +S T P +H ILR++N+L
Sbjct: 248 EEELIAS-LNTRLNAIRTLESRISLIKSYLSSISPSSEEGQKDSATKP-DHTILRDINSL 305
Query: 262 RHRLPVL---DNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQMLGR 318
L +L + AF + Q NDV+L+ LG +++ N + + V K + + R
Sbjct: 306 LSNLSLLTPHEQSAFSAETLAQNNDVSLVALLGQLSQSVNGMRE-VGKRTAIVNSVRRNR 364
Query: 319 KLRG 322
K G
Sbjct: 365 KQLG 368
Score = 98 (39.6 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 161 LPVSVYESIID-----------LVGGEATML---FIELPYTIITEEAERMGVDHVARMSN 206
LP+++YES+ + V GE +L F ELPYTI T EAE +G+D VAR +
Sbjct: 153 LPLTIYESVYEGESVTENGKAMQVDGEEQLLNIRFRELPYTIETGEAEMIGIDTVARTAR 212
Query: 207 NDSG-ESSLVA 216
N + E+S VA
Sbjct: 213 NAAATETSTVA 223
>UNIPROTKB|G4MZL5 [details] [associations]
symbol:MGG_01432 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000555
Pfam:PF01398 EMBL:CM001232 RefSeq:XP_003714381.1
ProteinModelPortal:G4MZL5 EnsemblFungi:MGG_01432T0 GeneID:2679326
KEGG:mgr:MGG_01432 Uniprot:G4MZL5
Length = 421
Score = 221 (82.9 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 47/144 (32%), Positives = 90/144 (62%)
Query: 37 IHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFE-LVYNIIEDE 95
+HV LHPLV++ +S++ TR + G+ ++GA++G Q G K+ ++++FE L ++ +
Sbjct: 20 LHVGLHPLVLLTVSDYITRHTLR-GQTCSIVGAILGQQNGTKITMEHAFECLTQSLPNGD 78
Query: 96 MIINRDYYTLKEEQFKQVFCD--LDFLGWYTTGDTV--NELDIKVHKQICEINESPIFLK 151
+ +++D++T + +Q K V D LD +GW+T ++ +++H QI +NES L
Sbjct: 79 LSLDQDWFTNRLDQMKLVHKDRNLDLVGWFTLLPRAGPDQRLLQLHNQILAVNESAALLA 138
Query: 152 LNPHPIH----SNLPVSVYESIID 171
L+P I S LPV++YE++++
Sbjct: 139 LHPEDIAAAAGSKLPVTIYETVLE 162
Score = 103 (41.3 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 245 SGTLPVNHDILRELNALRHRLPVL---DNPAFKTDFYTQCNDVALITYLGTITKGCNDLN 301
SGT + +LR + AL +R+P+L AFK D ++ NDV +++ L + + N+L
Sbjct: 325 SGTTSPSPVLLRSIQALVNRIPLLIPSSTEAFKQDMLSEANDVQIVSLLNDVLQSVNELR 384
Query: 302 QFVNKFNVL 310
KF+V+
Sbjct: 385 DVGKKFHVV 393
Score = 74 (31.1 bits), Expect = 2.2e-29, Sum P(3) = 2.2e-29
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 191 EEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLK 241
EE E G +S D LV+ LTA+ NAIKML RI+++ YL+
Sbjct: 256 EEEEETGAAEPVPLSREDE---ELVST-LTAKANAIKMLSARIQLITKYLE 302
Score = 61 (26.5 bits), Expect = 4.9e-28, Sum P(3) = 4.9e-28
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 181 FIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIK 234
F ELPY++ T E E + + VAR N +G +++V + + +++ + V K
Sbjct: 194 FRELPYSVETAEDEMISMAFVARGGAN-AGTTTVVDDPANRKKSSVSSVQVDTK 246
>TAIR|locus:2074653 [details] [associations]
symbol:MEE34 "AT3G11270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010564 "regulation of
cell cycle process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009793
GO:GO:0030163 GO:GO:0000502 EMBL:AC073395 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 ProtClustDB:PLN03246
MEROPS:M67.973 EMBL:AY258412 EMBL:AK228032 IPI:IPI00536063
RefSeq:NP_187736.1 UniGene:At.39785 ProteinModelPortal:Q9C774
SMR:Q9C774 IntAct:Q9C774 STRING:Q9C774 PRIDE:Q9C774 DNASU:820298
EnsemblPlants:AT3G11270.1 GeneID:820298 KEGG:ath:AT3G11270
TAIR:At3g11270 InParanoid:Q9C774 OMA:INAKEHI PhylomeDB:Q9C774
Genevestigator:Q9C774 Uniprot:Q9C774
Length = 310
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 81/283 (28%), Positives = 145/283 (51%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV+++I +HY R K +V+G L+G +++ NS+ + + + D I
Sbjct: 17 VIVHPLVLLSIVDHYNRVAKDTSK--RVVGVLLGSSSRGTVDVTNSYAVPFEEDDKDTSI 74
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ +Y+ FK++ +GWY+TG + E D+ VH +P+ + ++
Sbjct: 75 WFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQ 134
Query: 156 PIHSNLPVSVY---ESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGES 212
P +P Y E + + ++ +F+ +P I E E +GV+H+ R D+ S
Sbjct: 135 PKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLR-DVKDTTIS 193
Query: 213 SLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLD-NP 271
+L E +TA+ A+K L R++ + YL V G LP+NH+IL L + + LP L+ N
Sbjct: 194 TLATE-VTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNE 252
Query: 272 AFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQ 314
K F + ND+ L+ YL ++ + L+ +N N L +K+
Sbjct: 253 LVKA-FAVKTNDMMLVIYLSSLIRSVIALHSLIN--NKLLNKE 292
>WB|WBGene00000818 [details] [associations]
symbol:csn-6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0009792 GO:GO:0006915 GO:GO:0000003 GO:GO:0000910
InterPro:IPR024969 Pfam:PF13012 EMBL:AL132951 GeneID:178289
KEGG:cel:CELE_Y67H2A.6 CTD:178289 GeneTree:ENSGT00530000063075
HOGENOM:HOG000016396 RefSeq:NP_001255725.1
ProteinModelPortal:C5VUK2 IntAct:C5VUK2 STRING:C5VUK2
EnsemblMetazoa:Y67H2A.6b.1 EnsemblMetazoa:Y67H2A.6b.2
WormBase:Y67H2A.6b OMA:QDGTLQP ArrayExpress:C5VUK2 Uniprot:C5VUK2
Length = 431
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 87/292 (29%), Positives = 153/292 (52%)
Query: 36 SIHVSLHPLVIMNISEHYTRRRAQEGKPVQ-VIGALIGIQVGRKLEIKNSFELVYNIIE- 93
S V LHPLVIM +SEHY+R + Q+G V+ V GA++G Q GR++E NSF L E
Sbjct: 11 SSKVLLHPLVIMQMSEHYSRTKVQQGPTVKKVFGAILGRQNGRQVEAINSFVLKMETEEM 70
Query: 94 -DEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGD----TVNELDI--KVHKQICEIN-- 144
+ + + ++ + +Q+ +VF +L +G Y G+ T E + K+ +
Sbjct: 71 AEPVTFSTEHLLQRADQYLEVFPELQVIGLYCAGEDDNLTPEEKPLLSKLTNAVRNSEKA 130
Query: 145 ---ESPIFLKLNPHPIHSN--LPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVD 199
++ +FLKLN + LP+ +E+ D+ E + + +++EE+ER+GV+
Sbjct: 131 GQIDATLFLKLNSITAGTTRKLPLFAFEA--DVTDQEKHK---PIEWILVSEESERVGVN 185
Query: 200 HVARMSNNDSGESSLVAE-HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILREL 258
H+A++S + V + H AQ A+ ML R+ +++ YL++V+ GTL N +IL+E
Sbjct: 186 HIAKLSTKHGKDGKSVGKKHAEAQDAAMSMLQNRVDLIVAYLEKVQDGTLQPNFEILKEA 245
Query: 259 NALRHRLPVLDNPA--FKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFN 308
N L +L +D A F F + + + + + +T ++ NK +
Sbjct: 246 NLLAQKLKTIDRYAAEFTDSFEKEEKTMTVFSLMPRLTTLLGNMQNVWNKLS 297
>UNIPROTKB|G4NCJ9 [details] [associations]
symbol:MGG_01059 "26S proteasome regulatory subunit rpn-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CM001235 GO:GO:0000502 InterPro:IPR024969 Pfam:PF13012
KO:K03038 RefSeq:XP_003717880.1 ProteinModelPortal:G4NCJ9
SMR:G4NCJ9 EnsemblFungi:MGG_01059T0 GeneID:2674847
KEGG:mgr:MGG_01059 Uniprot:G4NCJ9
Length = 357
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 72/242 (29%), Positives = 130/242 (53%)
Query: 38 HVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM- 96
+VS+ PLV++++ +HY R A + K +V+G L+G G+ + + NSF + + EDE
Sbjct: 15 NVSVAPLVLLSVVDHYNRESANQTKNKRVVGVLLGQNDGKNVRVSNSFAVPFE--EDEKN 72
Query: 97 ----IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKL 152
++ +Y + FK+V +GWY +G + D+++++ +P+ + +
Sbjct: 73 PSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVII 132
Query: 153 NPHPIHSNLPVSVYESIIDLVG-GEATM-LFIELPYTIITEEAERMGVDHVARMSNNDSG 210
+ P + +P Y ++ ++ G AT F+ P I EEAE +GV+H+ R D
Sbjct: 133 DVQPKEAGVPTDAYFAVDEIKDDGTATSRTFVHTPSIIEAEEAEEIGVEHLLR-DIRDVA 191
Query: 211 ESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDN 270
+L + LT Q +++ LH+R++ + YL++V G LPVNH IL L + + LP L
Sbjct: 192 VGTL-STRLTNQLQSLQGLHLRLRDIQAYLQKVLDGDLPVNHAILGNLQDVFNLLPNLST 250
Query: 271 PA 272
P+
Sbjct: 251 PS 252
>TAIR|locus:2166449 [details] [associations]
symbol:RPN8A "AT5G05780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000502
GO:GO:0009965 eggNOG:COG1310 EMBL:AB005237 InterPro:IPR024969
Pfam:PF13012 KO:K03038 EMBL:U54560 EMBL:AF378878 EMBL:BT002610
EMBL:AY087393 IPI:IPI00538047 RefSeq:NP_196197.1 UniGene:At.20537
UniGene:At.67787 ProteinModelPortal:O24412 SMR:O24412 IntAct:O24412
STRING:O24412 PaxDb:O24412 PRIDE:O24412 EnsemblPlants:AT5G05780.1
GeneID:830463 KEGG:ath:AT5G05780 TAIR:At5g05780
HOGENOM:HOG000209236 InParanoid:O24412 OMA:RSIIALH PhylomeDB:O24412
ProtClustDB:PLN03246 Genevestigator:O24412 GermOnline:AT5G05780
Uniprot:O24412
Length = 308
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 80/283 (28%), Positives = 144/283 (50%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV+++I +HY R K +V+G L+G +++ NS+ + + + D I
Sbjct: 17 VVVHPLVLLSIVDHYNRVAKDSSK--RVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSI 74
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ +Y+ FK++ +GWY+TG + E D+ VH +P+ + ++
Sbjct: 75 WFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQ 134
Query: 156 PIHSNLPVSVY---ESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGES 212
P +P Y E + + ++ +F+ + I E E +GV+H+ R D+ S
Sbjct: 135 PKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLR-DVKDTTIS 193
Query: 213 SLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLD-NP 271
+L E +TA+ A+K L R++ + YL V G LP+NH+IL L + + LP L+ N
Sbjct: 194 TLATE-VTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNE 252
Query: 272 AFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQ 314
K F + ND+ L+ YL ++ + L+ +N N L +K+
Sbjct: 253 LVKA-FSVKTNDMMLVIYLSSLIRSVIALHNLIN--NKLLNKE 292
>ZFIN|ZDB-GENE-030131-5541 [details] [associations]
symbol:psmd7 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 7 (Mov34 homolog)" species:7955 "Danio rerio"
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 ZFIN:ZDB-GENE-030131-5541 GO:GO:0000502
eggNOG:COG1310 GO:GO:0021551 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:BC044358 EMBL:BC066605 IPI:IPI00481317
RefSeq:NP_956083.1 UniGene:Dr.80368 SMR:Q7ZYX7 STRING:Q7ZYX7
Ensembl:ENSDART00000098229 GeneID:327330 KEGG:dre:327330
InParanoid:Q7ZYX7 NextBio:20809984 Uniprot:Q7ZYX7
Length = 327
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 77/275 (28%), Positives = 146/275 (53%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+ +
Sbjct: 9 VVVHPLVLLSVVDHFNRI-GKVGSQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVH---KQICEINESPIFLKL 152
++ DY FK+V +GWY TG +++ DI ++ KQ C N + + +
Sbjct: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKQYCS-NSVLVIIDV 126
Query: 153 NPHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSG 210
P + LP Y S+ ++ G + F + I EEAE +GV+H+ R D+
Sbjct: 127 KPKDL--GLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTT 183
Query: 211 ESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDN 270
+L ++ +T Q + +K L+ ++ + YL++V +G LP+NH I+ +L + + LP ++
Sbjct: 184 VGTL-SQRITNQVHGLKGLNSKLLDIKSYLEKVATGKLPINHQIIYQLQDVFNLLPDVNL 242
Query: 271 PAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
F FY + ND L+ YL ++ + L+ +N
Sbjct: 243 QEFVKAFYLKTNDQMLVVYLASLIRSVVALHNLIN 277
>FB|FBgn0002787 [details] [associations]
symbol:Rpn8 "Regulatory particle non-ATPase 8" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=NAS;IDA] [GO:0000502 "proteasome complex"
evidence=NAS;IDA] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS;NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0030425 "dendrite" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:AE013599 GO:GO:0022008 GO:GO:0008283 GO:GO:0030425
GO:GO:0006508 GO:GO:0004175 GO:GO:0008541 eggNOG:COG1310
GO:GO:0000022 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 BRENDA:3.4.25.1 OMA:RSIIALH
MEROPS:M67.973 EMBL:M64643 EMBL:AY089283 RefSeq:NP_523845.2
UniGene:Dm.770 ProteinModelPortal:P26270 SMR:P26270 DIP:DIP-22847N
IntAct:P26270 MINT:MINT-819762 STRING:P26270 PaxDb:P26270
EnsemblMetazoa:FBtr0072290 EnsemblMetazoa:FBtr0332921 GeneID:37894
KEGG:dme:Dmel_CG3416 UCSC:CG3416-RA CTD:37894 FlyBase:FBgn0002787
InParanoid:P26270 OrthoDB:EOG4BG7BS PhylomeDB:P26270
GenomeRNAi:37894 NextBio:805917 Bgee:P26270 GermOnline:CG3416
Uniprot:P26270
Length = 338
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 73/273 (26%), Positives = 142/273 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRK-LEIKNSFELVYNIIE-DEM 96
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+
Sbjct: 11 VIVHPLVLLSVVDHFNRM-GKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKS 69
Query: 97 I--INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNP 154
+ ++ DY FK+V +GWY TG +++ DI +++ + + + + ++
Sbjct: 70 VWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVRRYCPNSVLVIIDA 129
Query: 155 HPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGES 212
P LP Y S+ ++ G + F +P I EEAE +GV+H+ R D+
Sbjct: 130 KPKDLGLPTEAYISVEEVHDDGSPTSKTFEHVPSEIGAEEAEEVGVEHLLR-DIKDTTVG 188
Query: 213 SLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPA 272
SL ++ +T Q +K L+ +++ + YL+ V +P+NH I+ +L + + LP + N
Sbjct: 189 SL-SQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQDIFNLLPDITNDQ 247
Query: 273 FKTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
F Y + ND L+ YL ++ + L+ +N
Sbjct: 248 FTGTMYVKTNDQMLVVYLASMVRSIIALHNLIN 280
>POMBASE|SPCC1682.10 [details] [associations]
symbol:rpn8 "19S proteasome regulatory subunit Rpn8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPCC1682.10 GO:GO:0005829 GO:GO:0007346
GO:GO:0005635 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0008541 eggNOG:COG1310 GO:GO:0004843 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 MEROPS:M67.973
PIR:T41067 RefSeq:NP_587803.1 ProteinModelPortal:O74440 SMR:O74440
IntAct:O74440 STRING:O74440 PRIDE:O74440 EnsemblFungi:SPCC1682.10.1
GeneID:2538912 KEGG:spo:SPCC1682.10 OMA:KKINANE OrthoDB:EOG4QC4FM
NextBio:20800090 Uniprot:O74440
Length = 324
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 76/284 (26%), Positives = 148/284 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM-- 96
V +HPLV+++ + Y R + +G +V+G L+G G + + NS+ + + EDE
Sbjct: 17 VIVHPLVLLSAVDSYNR--SAKGTKRRVVGILLGQNNGDVVNVANSYAIPFE--EDEKNA 72
Query: 97 ---IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLN 153
++ ++ E FK++ + +GWY TG + D++++ + + +P+ + ++
Sbjct: 73 SVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKKYIPNPVLVIID 132
Query: 154 PHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGE 211
P LP + Y +I ++ G +++ F+ LP +I EEAE +GV+H+ R D+
Sbjct: 133 VKPKSVGLPTNAYFAIDEIEDDGSKSSRTFVHLPSSIEAEEAEEIGVEHLLR-DTRDASV 191
Query: 212 SSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLP----- 266
+L A +T Q +++ L R+ + DYL++V G LP+NH IL EL ++ + LP
Sbjct: 192 GTL-ATRVTQQAQSLQGLGQRLTEIADYLRKVVDGQLPINHAILAELQSVFNLLPNIFSG 250
Query: 267 -VLDNPAFKTD----FYTQCNDVALITYLGTITKGCNDLNQFVN 305
V+ A +++ F ND + Y+ +I + L+ ++
Sbjct: 251 PVVSEQALESEAQRAFNVNSNDQLMSIYISSIVRAVIALHDLLD 294
>MGI|MGI:1351511 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1351511 GO:GO:0000502 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 CTD:5713
HOVERGEN:HBG035951 OrthoDB:EOG441QC3 EMBL:M64641 EMBL:M64640
EMBL:M64634 EMBL:M64635 EMBL:M64636 EMBL:M64637 EMBL:M64639
EMBL:AK031013 EMBL:AK159825 IPI:IPI00114667 PIR:A40556
RefSeq:NP_034947.1 UniGene:Mm.18347 ProteinModelPortal:P26516
SMR:P26516 IntAct:P26516 STRING:P26516 PhosphoSite:P26516
PaxDb:P26516 PRIDE:P26516 Ensembl:ENSMUST00000044106 GeneID:17463
KEGG:mmu:17463 InParanoid:P26516 NextBio:292104 Bgee:P26516
Genevestigator:P26516 GermOnline:ENSMUSG00000039067 Uniprot:P26516
Length = 321
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 73/272 (26%), Positives = 143/272 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+ +
Sbjct: 9 VVVHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ DY FK+V +GWY TG +++ DI +++ + + + + ++
Sbjct: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
Query: 156 PIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
P LP Y S+ ++ G + F + I EEAE +GV+H+ R D+ +
Sbjct: 128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTTVGT 186
Query: 214 LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAF 273
L ++ +T Q + +K L+ ++ + YL++V SG LP+NH I+ +L + + LP F
Sbjct: 187 L-SQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQDVFNLLPDASLQEF 245
Query: 274 KTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
FY + ND ++ YL ++ + L+ +N
Sbjct: 246 VKAFYLKTNDQMVVVYLASLIRSVVALHNLIN 277
>UNIPROTKB|P51665 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
eggNOG:COG1310 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH471166 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 HOGENOM:HOG000209236
OMA:RSIIALH MEROPS:M67.973 CTD:5713 HOVERGEN:HBG035951
OrthoDB:EOG441QC3 EMBL:D50063 EMBL:BC000338 EMBL:BC012606
IPI:IPI00019927 PIR:JC4154 PIR:S65491 RefSeq:NP_002802.2
UniGene:Hs.440604 PDB:2O95 PDB:2O96 PDBsum:2O95 PDBsum:2O96
ProteinModelPortal:P51665 SMR:P51665 DIP:DIP-27572N IntAct:P51665
MINT:MINT-5002613 STRING:P51665 PhosphoSite:P51665 DMDM:20532412
PaxDb:P51665 PeptideAtlas:P51665 PRIDE:P51665 DNASU:5713
Ensembl:ENST00000219313 GeneID:5713 KEGG:hsa:5713 UCSC:uc002fcq.3
GeneCards:GC16P074330 HGNC:HGNC:9565 HPA:CAB019379 MIM:157970
neXtProt:NX_P51665 PharmGKB:PA33911 InParanoid:P51665
PhylomeDB:P51665 ChiTaRS:PSMD7 EvolutionaryTrace:P51665
GenomeRNAi:5713 NextBio:22194 ArrayExpress:P51665 Bgee:P51665
CleanEx:HS_PSMD7 Genevestigator:P51665 GermOnline:ENSG00000103035
Uniprot:P51665
Length = 324
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 72/272 (26%), Positives = 144/272 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+ +
Sbjct: 9 VVVHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ DY FK+V +GWY TG +++ DI +++ + + + + ++
Sbjct: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
Query: 156 PIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
P LP Y S+ ++ G + F + I EEAE +GV+H+ R D+ +
Sbjct: 128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTTVGT 186
Query: 214 LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAF 273
L ++ +T Q + +K L+ ++ + YL++V +G LP+NH I+ +L + + LP + F
Sbjct: 187 L-SQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEF 245
Query: 274 KTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
FY + ND ++ YL ++ + L+ +N
Sbjct: 246 VKAFYLKTNDQMVVVYLASLIRSVVALHNLIN 277
>WB|WBGene00004464 [details] [associations]
symbol:rpn-8 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0000003 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 72/281 (25%), Positives = 148/281 (52%)
Query: 39 VSLHPLVIMNISEHYTR-RRAQEGKPVQVIGALIG-IQVGRKLEIKNSFELVYNIIEDEM 96
V++HPLV++++ +H+ R + Q K +V+G L+G ++ + L+I NSF + ++ ED+
Sbjct: 41 VTVHPLVLLSVVDHFNRVSKTQSVK--RVVGVLLGSMKKDKTLDIGNSFAVPFD--EDDK 96
Query: 97 -----IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLK 151
++ DY F +V +GWY TG +++ DI +++Q+ +P+ +
Sbjct: 97 DKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVI 156
Query: 152 LNPHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDS 209
++ P + LP Y + ++ G F +P I EEAE +GV+H+ R + +
Sbjct: 157 IDAEPKNIGLPTEAYIEVQEVHDDGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIKDQT 216
Query: 210 GESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLD 269
+ +++ +T Q ++ L +++ + YL ++ GTLPVNH ++ + + + LP +
Sbjct: 217 --AGTLSQRITDQLMGLRGLQSQLESIEKYLHDIVRGTLPVNHHVIYYVQEVLNLLPDVT 274
Query: 270 NPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFV-NKFNV 309
+P + Q ND + Y+G++ + L+ + NK ++
Sbjct: 275 HPDYIVSQNVQTNDQLMCVYMGSLVRSVVALHNLIDNKISL 315
>UNIPROTKB|O61792 [details] [associations]
symbol:rpn-8 "Protein RPN-8" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0000003
eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 EMBL:FO080613 KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 PIR:T33096
RefSeq:NP_491319.1 ProteinModelPortal:O61792 SMR:O61792
IntAct:O61792 MINT:MINT-210994 STRING:O61792 PaxDb:O61792
EnsemblMetazoa:R12E2.3.1 EnsemblMetazoa:R12E2.3.2 GeneID:172009
KEGG:cel:CELE_R12E2.3 UCSC:R12E2.3.1 CTD:172009 WormBase:R12E2.3
InParanoid:O61792 NextBio:873645 Uniprot:O61792
Length = 362
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 72/281 (25%), Positives = 148/281 (52%)
Query: 39 VSLHPLVIMNISEHYTR-RRAQEGKPVQVIGALIG-IQVGRKLEIKNSFELVYNIIEDEM 96
V++HPLV++++ +H+ R + Q K +V+G L+G ++ + L+I NSF + ++ ED+
Sbjct: 41 VTVHPLVLLSVVDHFNRVSKTQSVK--RVVGVLLGSMKKDKTLDIGNSFAVPFD--EDDK 96
Query: 97 -----IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLK 151
++ DY F +V +GWY TG +++ DI +++Q+ +P+ +
Sbjct: 97 DKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQLKRFCPNPVLVI 156
Query: 152 LNPHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDS 209
++ P + LP Y + ++ G F +P I EEAE +GV+H+ R + +
Sbjct: 157 IDAEPKNIGLPTEAYIEVQEVHDDGTPPIKTFEHVPSDIGAEEAEEVGVEHLLRDIKDQT 216
Query: 210 GESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLD 269
+ +++ +T Q ++ L +++ + YL ++ GTLPVNH ++ + + + LP +
Sbjct: 217 --AGTLSQRITDQLMGLRGLQSQLESIEKYLHDIVRGTLPVNHHVIYYVQEVLNLLPDVT 274
Query: 270 NPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFV-NKFNV 309
+P + Q ND + Y+G++ + L+ + NK ++
Sbjct: 275 HPDYIVSQNVQTNDQLMCVYMGSLVRSVVALHNLIDNKISL 315
>UNIPROTKB|Q3ZBD0 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9913 "Bos taurus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0000502 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03038 HOGENOM:HOG000209236
OMA:RSIIALH EMBL:BC103437 IPI:IPI00685826 RefSeq:NP_001029595.1
UniGene:Bt.49378 ProteinModelPortal:Q3ZBD0 SMR:Q3ZBD0 STRING:Q3ZBD0
MEROPS:M67.973 PRIDE:Q3ZBD0 Ensembl:ENSBTAT00000024515
GeneID:512456 KEGG:bta:512456 CTD:5713 HOVERGEN:HBG035951
InParanoid:Q3ZBD0 OrthoDB:EOG441QC3 NextBio:20870397 Uniprot:Q3ZBD0
Length = 322
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 72/272 (26%), Positives = 144/272 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+ +
Sbjct: 9 VVVHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ DY FK+V +GWY TG +++ DI +++ + + + + ++
Sbjct: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
Query: 156 PIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
P LP Y S+ ++ G + F + I EEAE +GV+H+ R D+ +
Sbjct: 128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTTVGT 186
Query: 214 LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAF 273
L ++ +T Q + +K L+ ++ + YL++V +G LP+NH I+ +L + + LP + F
Sbjct: 187 L-SQRITNQVHGLKGLNSKLLDIRGYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEF 245
Query: 274 KTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
FY + ND ++ YL ++ + L+ +N
Sbjct: 246 VKAFYLKTNDQMVVVYLASLIRSVVALHNLIN 277
>RGD|1306902 [details] [associations]
symbol:Psmd7 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 7" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 RGD:1306902 GO:GO:0000502 EMBL:CH473972
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
KO:K03038 OMA:RSIIALH CTD:5713 OrthoDB:EOG441QC3 IPI:IPI00359611
RefSeq:NP_001100896.1 UniGene:Rn.20659 IntAct:D4AEH3
Ensembl:ENSRNOT00000019104 GeneID:307821 KEGG:rno:307821
UCSC:RGD:1306902 NextBio:657930 Uniprot:D4AEH3
Length = 320
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 73/272 (26%), Positives = 143/272 (52%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE-DEMI 97
V +HPLV++++ +H+ R + G +V+G L+G + L++ NSF + ++ + D+ +
Sbjct: 9 VVVHPLVLLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSV 67
Query: 98 --INRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ DY FK+V +GWY TG +++ DI +++ + + + + ++
Sbjct: 68 WFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
Query: 156 PIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
P LP Y S+ ++ G + F + I EEAE +GV+H+ R D+ +
Sbjct: 128 PKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTTVGT 186
Query: 214 LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAF 273
L ++ +T Q + +K L+ ++ + YL++V SG LP+NH I+ +L + + LP F
Sbjct: 187 L-SQRITNQVHGLKGLNSKLLDIRTYLEKVASGKLPINHHIIYQLQDVFNLLPDASLQEF 245
Query: 274 KTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
FY + ND ++ YL ++ + L+ +N
Sbjct: 246 VKAFYLKTNDQMVVVYLASLIRSVVALHNLIN 277
>ASPGD|ASPL0000029143 [details] [associations]
symbol:AN5121 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:BN001305 InterPro:IPR024969 Pfam:PF13012 HOGENOM:HOG000209236
OMA:RSIIALH EnsemblFungi:CADANIAT00003105 Uniprot:C8VEY3
Length = 349
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 65/241 (26%), Positives = 129/241 (53%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM-- 96
V++ PLV++++++HY R + +G +V+G L+G +G + + NSF + + EDE
Sbjct: 16 VTVAPLVLLSVADHYGR--SAKGTRKRVVGVLLGEHIGGNVRVSNSFAVPFE--EDEKDP 71
Query: 97 ---IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLN 153
++ ++ + FK++ +GWY +G + D+++++ +P+ + ++
Sbjct: 72 SVWFLDHNFVESMRDMFKKINAREKLIGWYHSGPKLRASDLEINELFKRYTPNPLLVIVD 131
Query: 154 PHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGE 211
P +P Y ++ ++ G + F+ P TI EEAE +GV+H+ R D
Sbjct: 132 VQPKEVGVPTDAYFAVDEIKDDGTTTSRTFVHTPSTIEAEEAEEIGVEHLLR-DIRDVAV 190
Query: 212 SSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNP 271
+L + +T+Q +++ LH+R++ + YL++V LPVNH IL L + + LP L P
Sbjct: 191 GTL-STRITSQLQSLQGLHLRLRDIGQYLQKVLDHELPVNHAILGNLQDVFNLLPNLSTP 249
Query: 272 A 272
+
Sbjct: 250 S 250
>CGD|CAL0002371 [details] [associations]
symbol:RPN8 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 75/298 (25%), Positives = 147/298 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM-- 96
V + PLV++++ +HY R A++ K +V+G ++G +++ NS+ + + EDE
Sbjct: 18 VVVSPLVLLSVVDHYNRV-AKDSKK-RVVGVILGDNSTDTIKVTNSYAIPFE--EDEKNP 73
Query: 97 ---IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLN 153
++ ++ E FK++ +GWY +G + D+K+++ ++P+ L ++
Sbjct: 74 GVWFLDHNFIDSMGEMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVD 133
Query: 154 PHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVAR-MSNNDSG 210
P +P Y ++ D+ G A FI +P I EEAE +GV+H+ R + + +G
Sbjct: 134 VQPREVGIPTDAYFAVDDIKNDGSAAEKTFIHVPSLIEAEEAEEIGVEHLLRDIRDQAAG 193
Query: 211 ESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVL-- 268
SL ++ + ++ LH ++ + +YL +V LP+NH IL +L + + LP L
Sbjct: 194 NLSL---RVSETHQSLLGLHQKLGEIANYLDKVYQKKLPMNHTILGKLQNVFNLLPNLMQ 250
Query: 269 -----------DNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQM 315
+ A T F + ND +I Y+ T+ + + + N L +K++
Sbjct: 251 QSGSDLDGGSDSSHALATAFTVKTNDELMIIYISTLVRAIIAFHDLIE--NKLENKKL 306
>DICTYBASE|DDB_G0279633 [details] [associations]
symbol:psmD7 "26S proteasome non-ATPase regulatory
subunit 7" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 dictyBase:DDB_G0279633 GenomeReviews:CM000152_GR
GO:GO:0006511 EMBL:AAFI02000032 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 OMA:RSIIALH MEROPS:M67.973
RefSeq:XP_641565.1 ProteinModelPortal:Q54WI8 SMR:Q54WI8
STRING:Q54WI8 EnsemblProtists:DDB0232987 GeneID:8622140
KEGG:ddi:DDB_G0279633 ProtClustDB:CLSZ2434496 Uniprot:Q54WI8
Length = 325
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 72/274 (26%), Positives = 134/274 (48%)
Query: 41 LHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM---- 96
+HP V++++ +HY R K +V+GAL+G +++ N + L + EDE
Sbjct: 10 VHPTVLLSVVDHYNRVAKDTNK--RVVGALLGSNNKGVVDVSNCYGLPFE--EDEANPNI 65
Query: 97 -IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
++ +++ FK++ + +GWY+TG + D +++ +P+ + ++
Sbjct: 66 WFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRRYTPNPVMVIIDVA 125
Query: 156 PIHSNLPVSVYESI--IDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESS 213
P +P Y ++ I+ E+TM F +P +I EAE + ++H+ R DS SS
Sbjct: 126 PKELGIPTKSYVTVEEINKDTSESTMRFQHIPSSIDAVEAEEICIEHLLR-DVKDSSISS 184
Query: 214 LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAF 273
L + +T + ++K L ++ + YLK V GTLP NH I+ + + + P L+
Sbjct: 185 LTTQ-ITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDIINLSPNLNANEI 243
Query: 274 KTDFYTQCNDVALITYLGTITKGCNDL-NQFVNK 306
F Q ND + YL ++ + L N +NK
Sbjct: 244 SKSFAVQNNDTMSVIYLSSMIRSIIALHNLIINK 277
>UNIPROTKB|Q59YL2 [details] [associations]
symbol:RPN8 "Likely 26S proteasome regulatory particle
subunit Rpn8p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
CGD:CAL0002371 GO:GO:0035690 EMBL:AACQ01000100 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236
MEROPS:M67.973 RefSeq:XP_714586.1 ProteinModelPortal:Q59YL2
SMR:Q59YL2 STRING:Q59YL2 GeneID:3643770 KEGG:cal:CaO19.3168
Uniprot:Q59YL2
Length = 330
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 75/298 (25%), Positives = 147/298 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM-- 96
V + PLV++++ +HY R A++ K +V+G ++G +++ NS+ + + EDE
Sbjct: 18 VVVSPLVLLSVVDHYNRV-AKDSKK-RVVGVILGDNSTDTIKVTNSYAIPFE--EDEKNP 73
Query: 97 ---IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLN 153
++ ++ E FK++ +GWY +G + D+K+++ ++P+ L ++
Sbjct: 74 GVWFLDHNFIDSMGEMFKKINAKEKLIGWYHSGPKLKPSDLKINEVFRRYTDNPLLLIVD 133
Query: 154 PHPIHSNLPVSVYESIIDLV--GGEATMLFIELPYTIITEEAERMGVDHVAR-MSNNDSG 210
P +P Y ++ D+ G A FI +P I EEAE +GV+H+ R + + +G
Sbjct: 134 VQPREVGIPTDAYFAVDDIKNDGSAAEKTFIHVPSLIEAEEAEEIGVEHLLRDIRDQAAG 193
Query: 211 ESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVL-- 268
SL ++ + ++ LH ++ + +YL +V LP+NH IL +L + + LP L
Sbjct: 194 NLSL---RVSETHQSLLGLHQKLGEIANYLDKVYQKKLPMNHTILGKLQNVFNLLPNLMQ 250
Query: 269 -----------DNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQM 315
+ A T F + ND +I Y+ T+ + + + N L +K++
Sbjct: 251 QSGSDLDGGSDSSHALATAFTVKTNDELMIIYISTLVRAIIAFHDLIE--NKLENKKL 306
>SGD|S000005787 [details] [associations]
symbol:RPN8 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034515 "proteasome storage granule" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 SGD:S000005787 EMBL:BK006948 GO:GO:0008541
GO:GO:0006511 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 RefSeq:NP_014907.3 GeneID:854437
KEGG:sce:YOR264W GO:GO:0034515 RefSeq:NP_014904.3 PDB:4B4T
PDBsum:4B4T GeneID:854435 KEGG:sce:YOR261C KO:K03038
HOGENOM:HOG000209236 OMA:RSIIALH MEROPS:M67.973 OrthoDB:EOG4QC4FM
EMBL:Z75169 EMBL:AY558039 PIR:S67158 ProteinModelPortal:Q08723
SMR:Q08723 DIP:DIP-1574N IntAct:Q08723 MINT:MINT-405204
STRING:Q08723 PaxDb:Q08723 PeptideAtlas:Q08723 EnsemblFungi:YOR261C
NextBio:976670 Genevestigator:Q08723 GermOnline:YOR261C
Uniprot:Q08723
Length = 338
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 69/239 (28%), Positives = 123/239 (51%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIE---DE 95
V++ PLV+++ +HY R + +E K + +G ++G + + NSF L + E D
Sbjct: 8 VTIAPLVLLSALDHYERTQTKENK--RCVGVILGDANSSTIRVTNSFALPFEEDEKNSDV 65
Query: 96 MIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINES-PIFLKLNP 154
++ +Y E K++ +GWY +G + D+K+++ + ++ P+ L ++
Sbjct: 66 WFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFKKYTQNNPLLLIVDV 125
Query: 155 HPIHSNLPVSVYESIIDLVG-GEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGES 212
LP Y +I + G +T F+ LP TI EEAE +GV+H+ R D
Sbjct: 126 KQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLR-DVRDQAAG 184
Query: 213 SLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNP 271
L + LT Q ++K L ++K +++YL +V + LP+NH IL +L + + LP L P
Sbjct: 185 GL-SIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQDVFNLLPNLGTP 242
>MGI|MGI:1913335 [details] [associations]
symbol:Eif3f "eukaryotic translation initiation factor 3,
subunit F" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913335 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 EMBL:CH466531 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
HOGENOM:HOG000241154 MEROPS:M67.974 CTD:8665 HOVERGEN:HBG107843
OrthoDB:EOG44XJHN EMBL:AK002778 EMBL:BC083190 IPI:IPI00120914
RefSeq:NP_079620.2 UniGene:Mm.182962 ProteinModelPortal:Q9DCH4
SMR:Q9DCH4 DIP:DIP-42766N IntAct:Q9DCH4 MINT:MINT-1899046
STRING:Q9DCH4 PhosphoSite:Q9DCH4 PaxDb:Q9DCH4 PRIDE:Q9DCH4
Ensembl:ENSMUST00000033342 GeneID:66085 KEGG:mmu:66085
InParanoid:Q5XJV3 ChiTaRS:EIF3F NextBio:320584 Bgee:Q9DCH4
Genevestigator:Q9DCH4 GermOnline:ENSMUSG00000031029 Uniprot:Q9DCH4
Length = 361
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 72/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 96 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 152
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ H
Sbjct: 153 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQH 212
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 213 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD 272
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 273 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 331
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 332 NSNINDLLMVTYLANLTQSQIALNEKLVN 360
>UNIPROTKB|E1C050 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ
CTD:8665 EMBL:AC140789 IPI:IPI00578336 RefSeq:XP_421624.1
PRIDE:E1C050 Ensembl:ENSGALT00000008544 GeneID:423748
KEGG:gga:423748 NextBio:20826172 Uniprot:E1C050
Length = 332
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 69/265 (26%), Positives = 132/265 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+V+ +I + + RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 67 VRLHPVVLASIVDSFERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 123
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V LGWY TG + E + +H+ +PI L ++ +
Sbjct: 124 DMEFAKNMYELHKKVSPSEIILGWYATGHDITEHSVLIHEYYSREAHNPIHLTVDTSLQN 183
Query: 159 SNLPVSVYESI-IDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
S + + Y S + + G ++F L + + ER+GVD + + + + L ++
Sbjct: 184 SRMSIKAYVSAPMGVPGKTMGVMFTPLTVKYVYYDTERIGVDLIMKTCFSPNRVIGLSSD 243
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L +A + + ++L Y ++V SG + ++ + R L L +++P + F+T
Sbjct: 244 -LQQVGSASARIQDTLGMVLQYAEDVLSGKVAADNTVGRFLMDLINQVPKISPEDFETML 302
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ 302
+ ND+ ++TYL +T+ LN+
Sbjct: 303 NSNINDLLMVTYLANLTQSQIALNE 327
>UNIPROTKB|B3KSH1 [details] [associations]
symbol:EIF3F "HCG1784554, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CH471064 GO:GO:0003743 InterPro:IPR024969 Pfam:PF13012
OMA:HPVVLFQ HOGENOM:HOG000241154 UniGene:Hs.516023 HGNC:HGNC:3275
HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456 EMBL:AK093511
IPI:IPI00654777 SMR:B3KSH1 IntAct:B3KSH1 STRING:B3KSH1
Ensembl:ENST00000537635 Uniprot:B3KSH1
Length = 372
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 71/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 107 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 163
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ +
Sbjct: 164 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQN 223
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 224 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD 283
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 284 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 342
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 343 NSNINDLLMVTYLANLTQSQIALNEKLVN 371
>UNIPROTKB|O00303 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA;TAS] [GO:0003743 "translation initiation factor
activity" evidence=IC;IDA;TAS] [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 GO:GO:0008234 GO:GO:0006508 GO:GO:0003743
eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
KO:K03249 HAMAP:MF_03005 Reactome:REACT_1762 HOGENOM:HOG000241154
EMBL:U94855 EMBL:AK095574 EMBL:AK289637 EMBL:AK291354 EMBL:BT006894
EMBL:CR456959 EMBL:BC000490 IPI:IPI00941255 RefSeq:NP_003745.1
UniGene:Hs.516023 ProteinModelPortal:O00303 SMR:O00303
DIP:DIP-35580N IntAct:O00303 MINT:MINT-5000761 STRING:O00303
MEROPS:M67.974 PhosphoSite:O00303 PaxDb:O00303 PRIDE:O00303
DNASU:8665 Ensembl:ENST00000309828 Ensembl:ENST00000533626
GeneID:8665 KEGG:hsa:8665 UCSC:uc001mfw.3 CTD:8665
GeneCards:GC11P007966 HGNC:HGNC:3275 HPA:HPA049250 MIM:603914
neXtProt:NX_O00303 PharmGKB:PA162384806 HOVERGEN:HBG107843
InParanoid:O00303 OrthoDB:EOG44XJHN PhylomeDB:O00303
GenomeRNAi:8665 NextBio:32503 ArrayExpress:O00303 Bgee:O00303
CleanEx:HS_EIF3F Genevestigator:O00303 GermOnline:ENSG00000175390
Uniprot:O00303
Length = 357
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 71/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 92 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 148
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ +
Sbjct: 149 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQN 208
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 209 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD 268
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 269 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 327
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 328 NSNINDLLMVTYLANLTQSQIALNEKLVN 356
>UNIPROTKB|A5A6I3 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9598 "Pan troglodytes" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 KO:K03249 HAMAP:MF_03005
HOGENOM:HOG000241154 CTD:8665 HOVERGEN:HBG107843 OrthoDB:EOG44XJHN
EMBL:AB222111 RefSeq:NP_001104282.1 UniGene:Ptr.2608
ProteinModelPortal:A5A6I3 STRING:A5A6I3 GeneID:451007
KEGG:ptr:451007 InParanoid:A5A6I3 NextBio:20833681 Uniprot:A5A6I3
Length = 361
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 71/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 96 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 152
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ +
Sbjct: 153 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQN 212
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 213 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD 272
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 273 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 331
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 332 NSNINDLLMVTYLANLTQSQIALNEKLVN 360
>UNIPROTKB|Q4R5B8 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9541 "Macaca fascicularis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0008234 GO:GO:0006508 GO:GO:0003743 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 HAMAP:MF_03005 MEROPS:M67.974
HOVERGEN:HBG107843 OrthoDB:EOG44XJHN EMBL:AB169626
ProteinModelPortal:Q4R5B8 Uniprot:Q4R5B8
Length = 361
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 71/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 96 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 152
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ +
Sbjct: 153 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQN 212
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 213 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD 272
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 273 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETML 331
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 332 NSNINDLLMVTYLANLTQSQIALNEKLVN 360
>UNIPROTKB|E1BLZ8 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:DAAA02040761
IPI:IPI00837929 Ensembl:ENSBTAT00000049219 OMA:HHETMYE
Uniprot:E1BLZ8
Length = 384
Score = 252 (93.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 71/269 (26%), Positives = 132/269 (49%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMII 98
V LHP+++ +I + Y RR EG +VIG L+G +E+ N F + +N EDE+ +
Sbjct: 119 VRLHPVILASIVDSYERRN--EGA-ARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV 175
Query: 99 NRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIH 158
+ ++ E K+V + LGWY TG + E + +H+ +PI L ++ +
Sbjct: 176 DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQN 235
Query: 159 SNLPVSVYESIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAE 217
+ + Y S + V G ++F L + ER+GVD + + + + L ++
Sbjct: 236 GRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYTYYDTERIGVDLIMKTCFSPNRVIGLSSD 295
Query: 218 HLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDF 277
L A + + +L Y ++V SG + ++ + R L +L +++P + F+T
Sbjct: 296 -LQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPEDFETML 354
Query: 278 YTQCNDVALITYLGTITKGCNDLNQ-FVN 305
+ ND+ ++TYL +T+ LN+ VN
Sbjct: 355 NSNINDLLMVTYLANLTQSQIALNEKLVN 383
>DICTYBASE|DDB_G0293254 [details] [associations]
symbol:eif3F "eukaryotic translation initiation
factor 3 (eIF3) subunit 5" species:44689 "Dictyostelium discoideum"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
dictyBase:DDB_G0293254 GenomeReviews:CM000155_GR EMBL:AAFI02000200
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
RefSeq:XP_629217.1 ProteinModelPortal:Q54C49 STRING:Q54C49
PRIDE:Q54C49 EnsemblProtists:DDB0233924 GeneID:8629099
KEGG:ddi:DDB_G0293254 ProtClustDB:CLSZ2429292 Uniprot:Q54C49
Length = 284
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/263 (25%), Positives = 128/263 (48%)
Query: 37 IHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEM 96
+ V +HP+VI NI +HY RR + + VIG L+G LEI+N F +V++ E ++
Sbjct: 13 VTVKVHPVVIFNILDHYIRRNVGQDR---VIGTLLGFNNDGVLEIRNCFPVVHSETE-QI 68
Query: 97 IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEI--NESPIFLKLNP 154
+ +Y + + +GWY TG+ +NE + ++ + N +PI L ++
Sbjct: 69 AVEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDT 128
Query: 155 HPIHSNLPVSVYESIIDLVGGEATM--LFIELPYTIITEEAERMGVDHVARMSNNDSGES 212
+ + + Y + + E+++ F +LP I+T EAE G++ +A+ + D +
Sbjct: 129 GLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQ-TKYDQQST 187
Query: 213 SLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPA 272
SL++E L + ++ L ++ + Y++ VE G + + + R L LP +
Sbjct: 188 SLLSE-LESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKANAQV 246
Query: 273 FKTDFYTQCNDVALITYLGTITK 295
D+ +I YL ++T+
Sbjct: 247 MDKVINNSVKDLLMIVYLSSLTR 269
>UNIPROTKB|B4DXI8 [details] [associations]
symbol:PSMD7 "26S proteasome non-ATPase regulatory subunit
7" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 GO:GO:0000502
InterPro:IPR024969 Pfam:PF13012 HOVERGEN:HBG035951
UniGene:Hs.440604 HGNC:HGNC:9565 ChiTaRS:PSMD7 EMBL:AC009120
EMBL:AK301996 IPI:IPI01009629 SMR:B4DXI8 STRING:B4DXI8
Ensembl:ENST00000540379 Uniprot:B4DXI8
Length = 247
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 53/198 (26%), Positives = 103/198 (52%)
Query: 110 FKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYESI 169
FK+V +GWY TG +++ DI +++ + + + + ++ P LP Y S+
Sbjct: 5 FKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISV 64
Query: 170 IDLV--GGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIK 227
++ G + F + I EEAE +GV+H+ R D+ +L ++ +T Q + +K
Sbjct: 65 EEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR-DIKDTTVGTL-SQRITNQVHGLK 122
Query: 228 MLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALI 287
L+ ++ + YL++V +G LP+NH I+ +L + + LP + F FY + ND ++
Sbjct: 123 GLNSKLLDIRSYLEKVATGKLPINHQIIYQLQDVFNLLPDVSLQEFVKAFYLKTNDQMVV 182
Query: 288 TYLGTITKGCNDLNQFVN 305
YL ++ + L+ +N
Sbjct: 183 VYLASLIRSVVALHNLIN 200
>POMBASE|SPBC4C3.07 [details] [associations]
symbol:SPBC4C3.07 "translation initiation factor eIF3f"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071540 "eukaryotic
translation initiation factor 3 complex, eIF3e" evidence=IDA]
[GO:0071541 "eukaryotic translation initiation factor 3 complex,
eIF3m" evidence=IDA] [GO:0003743 "translation initiation factor
activity" evidence=IC] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPBC4C3.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003743
eggNOG:COG1310 GO:GO:0004843 GO:GO:0002183 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005 GO:GO:0016282
GO:GO:0071540 GO:GO:0071541 HOGENOM:HOG000241154 OrthoDB:EOG4RZ28G
PIR:T40490 RefSeq:NP_596298.1 ProteinModelPortal:O43060
STRING:O43060 EnsemblFungi:SPBC4C3.07.1 GeneID:2540868
KEGG:spo:SPBC4C3.07 NextBio:20801984 Uniprot:O43060
Length = 302
Score = 199 (75.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 70/285 (24%), Positives = 132/285 (46%)
Query: 37 IHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQV--GRKLEIKNSFELVYNIIED 94
+++ + P V+ +I +H TR+ + VIG L+G + GR++EIK+ F + +N +
Sbjct: 21 LNIVIEPAVLFSILDHSTRKSENNQR---VIGTLLGTRSEDGREIEIKSCFAVPHNESSE 77
Query: 95 EMIINRDYYTLKEEQFKQVFCDLDFLGWYTTG---DTVNELDIKVHKQICEINESPIFLK 151
++ + +Y+ + +GWY T D + L ++ E +P L
Sbjct: 78 QVEVEMEYHRAMYHLHLKANPREVVVGWYATSPDLDAFSALIQNLYASPAEPGTAP--LG 135
Query: 152 LNPHP-IH--------SNLPVSVY-ESIIDLVGGEA-TMLFIELPYTIITEEAERMGVDH 200
PHP +H S L + Y S + + A + F+ P+TI +EA R G+
Sbjct: 136 TYPHPCVHLTVNTDVSSPLAIKTYVSSPVGITERLADSCAFVPTPFTIRDDEAVRSGLKA 195
Query: 201 VARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNA 260
VA N+ S +SL + + + +++L + I+ + DY++ V G+ P N + R L
Sbjct: 196 VAAPKNDPSRLASLFTDLQQLRRSTLELLSM-IERVSDYVQNVIDGSSPANVAVGRYLMK 254
Query: 261 LRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVN 305
+P ++ F+ F + DV ++ YL + D+ +N
Sbjct: 255 CFSLIPCVEGQDFEKIFSSHLQDVLVVVYLANTLRTQVDIASRLN 299
>TAIR|locus:2061206 [details] [associations]
symbol:EIF2 "AT2G39990" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0009846 "pollen
germination" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0009790 GO:GO:0003743 eggNOG:COG1310 GO:GO:0009846
EMBL:AF002109 InterPro:IPR024969 Pfam:PF13012 KO:K03249 OMA:HPVVLFQ
HAMAP:MF_03005 EMBL:U54561 EMBL:AY045824 EMBL:AY091363
IPI:IPI00527838 PIR:H84823 RefSeq:NP_181528.1 UniGene:At.10968
ProteinModelPortal:O04202 SMR:O04202 STRING:O04202 PaxDb:O04202
PRIDE:O04202 EnsemblPlants:AT2G39990.1 GeneID:818587
KEGG:ath:AT2G39990 GeneFarm:2126 TAIR:At2g39990
HOGENOM:HOG000241154 InParanoid:O04202 PhylomeDB:O04202
ProtClustDB:CLSN2683386 Genevestigator:O04202 GermOnline:AT2G39990
Uniprot:O04202
Length = 293
Score = 186 (70.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 68/271 (25%), Positives = 120/271 (44%)
Query: 27 SVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIG-IQVGRKLEIKNSF 85
S A T + +HPLVI N+ + + RR +VIG L+G I ++I+NS+
Sbjct: 16 SSTASATTSVLTARIHPLVIFNVCDCFVRR---PDSAERVIGTLLGSILPDGTVDIRNSY 72
Query: 86 ELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINE 145
+ +N D++ ++ DY+ +V +GWY+TG VN +H
Sbjct: 73 AVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVP 132
Query: 146 SPIFLKLNPHPIHSNLPVSVY-ESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARM 204
+PI L ++ + + + S + L + F E+P + +AER+G D V +
Sbjct: 133 NPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFD-VLKA 191
Query: 205 SNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHR 264
++ D + L LT + ++L + I + Y+ V G + +++I R +
Sbjct: 192 TSVDKLPNDLEGMELTME----RLLTL-INDVYKYVDSVVGGQIAPDNNIGRFIADAVAS 246
Query: 265 LPVLDNPAFKTDFYTQCNDVALITYLGTITK 295
LP L F D L+ YL +IT+
Sbjct: 247 LPKLPPQVFDNLVNDSLQDQLLLLYLSSITR 277
>UNIPROTKB|C9JQK5 [details] [associations]
symbol:COPS6 "COP9 signalosome complex subunit 6"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
GO:GO:0008180 HGNC:HGNC:21749 ChiTaRS:COPS6 EMBL:AC073842
IPI:IPI01021789 ProteinModelPortal:C9JQK5 SMR:C9JQK5 STRING:C9JQK5
Ensembl:ENST00000419210 ArrayExpress:C9JQK5 Bgee:C9JQK5
Uniprot:C9JQK5
Length = 42
Score = 162 (62.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 29 MAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGAL 70
MA GVTGS+ V+LHPLVI+NIS+H+ R R+QEG+PVQVIGAL
Sbjct: 1 MACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGAL 42
>UNIPROTKB|B4DEW9 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0003743
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012 UniGene:Hs.516023
HGNC:HGNC:3275 HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456
EMBL:AK293826 IPI:IPI01013021 ProteinModelPortal:B4DEW9 SMR:B4DEW9
STRING:B4DEW9 PRIDE:B4DEW9 Ensembl:ENST00000449102
ArrayExpress:B4DEW9 Bgee:B4DEW9 Uniprot:B4DEW9
Length = 208
Score = 160 (61.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 108 EQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYE 167
E K+V + LGWY TG + E + +H+ +PI L ++ + + + Y
Sbjct: 9 ELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYV 68
Query: 168 SIIDLVGGEAT-MLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAI 226
S + V G ++F L + ER+GVD + + + + L ++ L A
Sbjct: 69 STLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSD-LQQVGGAS 127
Query: 227 KMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVAL 286
+ + +L Y ++V SG + ++ + R L +L +++P + F+T + ND+ +
Sbjct: 128 ARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLM 187
Query: 287 ITYLGTITKGCNDLNQ-FVN 305
+TYL +T+ LN+ VN
Sbjct: 188 VTYLANLTQSQIALNEKLVN 207
>FB|FBgn0033069 [details] [associations]
symbol:CG8335 species:7227 "Drosophila melanogaster"
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE013599
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 HAMAP:MF_03005 RefSeq:NP_610210.2
ProteinModelPortal:A1Z6K7 SMR:A1Z6K7 IntAct:A1Z6K7 STRING:A1Z6K7
GeneID:35547 KEGG:dme:Dmel_CG8335 UCSC:CG8335-RA
FlyBase:FBgn0033069 InParanoid:A1Z6K7 OMA:ITLSTMI OrthoDB:EOG41G1M1
GenomeRNAi:35547 NextBio:793971 Bgee:A1Z6K7 Uniprot:A1Z6K7
Length = 285
Score = 172 (65.6 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 63/275 (22%), Positives = 121/275 (44%)
Query: 29 MAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELV 88
M++ + V L PLV I + Y RR + QV+G L+G +EI N F +
Sbjct: 1 MSRNFSMRAKVYLKPLVFFQIIDAYDRRPKGDN---QVMGTLLGRNKEGHIEITNCFTVP 57
Query: 89 YNIIEDEMIINRDYYTLKEEQFKQVFC--DLDFLGWYTTGDTVNELDIKVH----KQICE 142
+ + I+ D E +F + LGW+ TG +V+ +H ++ CE
Sbjct: 58 HKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCE 117
Query: 143 INESPIFLKLNPHPIHSNLPVSVYESI-IDLVGGEATMLFIELPYTIITEEAERMGVDHV 201
P+ L ++ + L +Y ++ + + GG ++F +P I E ++ + + +
Sbjct: 118 --GQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCI 175
Query: 202 ARMSNND-SGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNA 260
+ S S + L +A + + R+ ++L Y+ +V + ++ + R L A
Sbjct: 176 EKQSQQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYA 235
Query: 261 LRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITK 295
+P+LD+ F+ F T D+ + L T+ K
Sbjct: 236 ALTAVPLLDSDKFRVMFNTNLRDMLMAITLSTMIK 270
>FB|FBgn0037270 [details] [associations]
symbol:CG9769 species:7227 "Drosophila melanogaster"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0035071 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
EMBL:AY118972 RefSeq:NP_649489.1 UniGene:Dm.11029
ProteinModelPortal:Q9VN50 SMR:Q9VN50 IntAct:Q9VN50 MINT:MINT-891663
STRING:Q9VN50 MEROPS:M67.975 PaxDb:Q9VN50 PRIDE:Q9VN50
EnsemblMetazoa:FBtr0078892 GeneID:40587 KEGG:dme:Dmel_CG9769
UCSC:CG9769-RA FlyBase:FBgn0037270 InParanoid:Q9VN50 KO:K03249
OMA:HPVVLFQ OrthoDB:EOG43TXBB PhylomeDB:Q9VN50 ChiTaRS:CG9769
GenomeRNAi:40587 NextBio:819523 Bgee:Q9VN50 HAMAP:MF_03005
Uniprot:Q9VN50
Length = 280
Score = 160 (61.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 56/271 (20%), Positives = 122/271 (45%)
Query: 36 SIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDE 95
++ V +HP+V+ + + + RR A + VIG L+G +E+ N F + + +D+
Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNADSHR---VIGTLLGSVDKGVVEVTNCFCVPHKEHDDQ 61
Query: 96 MIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPH 155
+ Y + ++V + +GW+ TG+ V +H+ +P+ L ++
Sbjct: 62 VEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTS 121
Query: 156 PIHSNLPVSVYESI-IDLVGGEATMLFIELPYTIITEEAERMGVDHVAR-MSNNDSGESS 213
+ + Y I + + GG++ +F +P + + E E G+ + + + + +
Sbjct: 122 LQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPK 181
Query: 214 LVAEHLT-AQYN-AIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNP 271
V L AQ + A L + ++L Y+ +V + + ++ + R+L L H +P + +
Sbjct: 182 TVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 272 AFKTDFYTQCNDVALITYLGTITKGCNDLNQ 302
F F ++ L+ L + K LN+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLNE 272
>UNIPROTKB|A4R0E5 [details] [associations]
symbol:MGG_10653 "Eukaryotic translation initiation factor
3 subunit F" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005737 GO:GO:0003743 EMBL:CM001231 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 KO:K03249 HAMAP:MF_03005
RefSeq:XP_003710082.1 ProteinModelPortal:A4R0E5 STRING:A4R0E5
EnsemblFungi:MGG_10653T0 GeneID:2682266 KEGG:mgr:MGG_10653
OrthoDB:EOG4RZ28G Uniprot:A4R0E5
Length = 370
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 63/286 (22%), Positives = 128/286 (44%)
Query: 39 VSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQV--GRKLEIKNSFELVYNIIEDEM 96
V++ P I++I +H RR ++ + +VIGAL+G++ G +E++++F + + ED++
Sbjct: 31 VTIQPQAILSILDHAVRRDIRDTQATRVIGALVGVRSEDGTDVEVRSTFAIPHTENEDQV 90
Query: 97 IINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQIC--EINESP---IFLK 151
++ +Y + LGWYTT +N + E P + L
Sbjct: 91 EVDVEYQKNMLALTLKASPRESLLGWYTTSHELNSFSALIQNFFASPETGTFPHPAVHLT 150
Query: 152 LNPHPIHSNLPVSVYESIIDLVGGEA---TMLFIELPY-TIITEEAERMGVDHVARMSNN 207
++ P +++ Y S V + + FI++P+ T T E++R ++ +A +
Sbjct: 151 MSTDP-GADIEPRCYISAPAAVSPDRAAESCFFIQVPHRTPPTNESDRAALEAIAA-GKD 208
Query: 208 DSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPV 267
D ++ V + A +++ + +Y+ V +H + + L P
Sbjct: 209 DEARTAPVLSDVEALARSLEQTIDMLDRTSEYVGAVLDEEREPSHALGQYLMNNLSLAPK 268
Query: 268 LDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDK 313
+D+ + + DF DV +++YL + DL Q + N L DK
Sbjct: 269 VDSVSIEHDFNNHIQDVLMVSYLTNTIRTQVDLAQRLALAN-LTDK 313
>ASPGD|ASPL0000055955 [details] [associations]
symbol:AN10182 species:162425 "Emericella nidulans"
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0071540
"eukaryotic translation initiation factor 3 complex, eIF3e"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:BN001308 GO:GO:0003743 InterPro:IPR024969
Pfam:PF13012 OMA:HPVVLFQ HOGENOM:HOG000241154
EnsemblFungi:CADANIAT00001258 Uniprot:C8VRX6
Length = 345
Score = 141 (54.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 59/268 (22%), Positives = 120/268 (44%)
Query: 34 TGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQV--GRKLEIKNSFELVYNI 91
T ++V + P + +I +H RR A + + VIG L+G + G ++EI+++F + +
Sbjct: 25 TAPLNVVIQPQALFSILDHSLRRNADQER---VIGTLLGTRSEDGTEVEIRSTFAVGHTE 81
Query: 92 IEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINES----P 147
D++ ++ +Y + +GWY T +N + + P
Sbjct: 82 TTDQVEVDMEYQKQMLALHLKANPREVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHP 141
Query: 148 -IFLKLNPHPIHSNLPVSVYESI-IDLVGGEA--TMLFIELPYTIITEEAERMGVDHVAR 203
+ L ++ P ++ Y S + + A + FI +P+ I EAE+ G++ +A
Sbjct: 142 AVHLTVSTEP-GKDIETRAYISAPVGVTAERAADSAAFIPVPHEIRYGEAEKSGLEAIAA 200
Query: 204 MSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILREL-NALR 262
+++ +SL + + A AI+ + I + Y++ V P + + + L NAL
Sbjct: 201 ARDSEERSTSLFTD-IEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALA 259
Query: 263 HRLPVLDNPAFKTDFYTQCNDVALITYL 290
P ++ + DF DV +++YL
Sbjct: 260 -LAPKVEPADIERDFNNHIQDVLVVSYL 286
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 326 313 0.00081 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 603 (64 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.20u 0.14s 26.34t Elapsed: 00:00:02
Total cpu time: 26.20u 0.14s 26.34t Elapsed: 00:00:02
Start: Thu Aug 15 13:50:31 2013 End: Thu Aug 15 13:50:33 2013