Query psy4010
Match_columns 1527
No_of_seqs 542 out of 1059
Neff 3.7
Searched_HMMs 29240
Date Fri Aug 16 23:07:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rjb_A Uncharacterized protein 100.0 2E-111 8E-116 957.3 17.9 306 1108-1522 5-445 (455)
2 3spc_A Inward-rectifier K+ cha 100.0 3.5E-83 1.2E-87 724.9 22.2 334 100-556 3-337 (343)
3 3sya_A G protein-activated inw 100.0 8.3E-83 2.8E-87 721.2 20.2 336 101-562 3-339 (340)
4 3spc_A Inward-rectifier K+ cha 100.0 3.3E-82 1.1E-86 717.0 23.1 318 638-1037 3-323 (343)
5 3sya_A G protein-activated inw 100.0 1.3E-81 4.4E-86 711.4 21.1 314 639-1037 3-319 (340)
6 2qks_A KIR3.1-prokaryotic KIR 100.0 5.5E-67 1.9E-71 588.8 21.3 298 639-1037 2-304 (321)
7 2qks_A KIR3.1-prokaryotic KIR 100.0 6.2E-66 2.1E-70 580.3 18.8 309 101-554 2-316 (321)
8 1xl4_A Inward rectifier potass 100.0 3.3E-64 1.1E-68 561.8 20.5 288 636-1030 5-296 (301)
9 1xl4_A Inward rectifier potass 100.0 1.5E-61 5E-66 540.6 19.8 287 101-527 8-296 (301)
10 1p7b_A Integral membrane chann 100.0 5.2E-62 1.8E-66 550.8 11.7 290 638-1035 22-314 (333)
11 1p7b_A Integral membrane chann 100.0 3.5E-59 1.2E-63 527.8 14.8 289 100-529 22-311 (333)
12 2gix_A Inward rectifier potass 100.0 2.4E-54 8.2E-59 461.5 14.3 183 327-539 15-197 (208)
13 1u4f_A Inward rectifier potass 100.0 8.1E-53 2.8E-57 462.9 15.0 190 327-552 20-209 (270)
14 3agw_A KIR3.2, G protein-activ 100.0 1.5E-51 5E-56 440.0 14.1 187 326-551 18-204 (208)
15 1n9p_A GIRK1, G protein-activa 100.0 7.2E-52 2.5E-56 442.1 11.2 190 325-553 15-204 (207)
16 2gix_A Inward rectifier potass 100.0 5.7E-50 2E-54 427.8 14.4 178 859-1037 15-194 (208)
17 2xky_I Inward rectifier potass 100.0 5.3E-49 1.8E-53 438.7 14.9 190 326-551 55-247 (309)
18 1u4f_A Inward rectifier potass 100.0 1.5E-48 5.1E-53 429.2 14.1 178 859-1037 20-199 (270)
19 1n9p_A GIRK1, G protein-activa 100.0 8.8E-48 3E-52 410.7 12.3 172 858-1032 16-189 (207)
20 3agw_A KIR3.2, G protein-activ 100.0 4.1E-47 1.4E-51 405.8 14.7 173 863-1037 21-195 (208)
21 2xky_I Inward rectifier potass 100.0 8.2E-45 2.8E-49 405.1 15.3 178 859-1037 56-238 (309)
22 3iuz_A Putative glyoxalase sup 99.9 9.6E-24 3.3E-28 238.5 -3.7 110 1114-1240 42-155 (340)
23 2rjb_A Uncharacterized protein 99.8 1E-21 3.6E-26 224.9 5.0 102 157-263 195-296 (455)
24 3iuz_A Putative glyoxalase sup 99.2 2E-12 6.7E-17 147.0 1.2 98 156-263 209-310 (340)
25 3lho_A Putative hydrolase; str 99.0 1.4E-10 4.6E-15 128.5 2.1 99 1116-1241 8-108 (267)
26 2k1e_A Water soluble analogue 98.9 5.1E-10 1.8E-14 107.3 2.4 82 772-870 18-99 (103)
27 2a9h_A Voltage-gated potassium 98.8 1.4E-09 4.8E-14 111.9 4.9 82 772-870 62-143 (155)
28 2ih3_C Voltage-gated potassium 98.7 3.2E-09 1.1E-13 104.8 3.2 81 773-870 40-120 (122)
29 3eff_K Voltage-gated potassium 98.7 2.5E-09 8.6E-14 106.9 1.3 63 806-870 37-99 (139)
30 3lho_A Putative hydrolase; str 98.6 3.9E-09 1.3E-13 117.0 -0.4 98 155-263 135-241 (267)
31 3pjs_K KCSA, voltage-gated pot 98.6 2.2E-09 7.6E-14 110.7 -2.3 63 806-870 64-126 (166)
32 4h33_A LMO2059 protein; bilaye 98.5 2.5E-08 8.7E-13 100.3 3.3 62 807-870 41-102 (137)
33 3ldc_A Calcium-gated potassium 98.4 9.5E-08 3.2E-12 88.5 3.6 55 808-864 27-81 (82)
34 1orq_C Potassium channel; volt 98.4 1E-07 3.6E-12 100.8 3.4 60 806-867 162-221 (223)
35 3ouf_A Potassium channel prote 98.4 9.9E-08 3.4E-12 91.0 2.9 61 808-870 31-91 (97)
36 2q67_A Potassium channel prote 98.2 6.9E-07 2.4E-11 87.5 5.1 60 808-869 48-107 (114)
37 3vou_A ION transport 2 domain 98.2 4.1E-07 1.4E-11 92.1 3.2 53 808-862 51-103 (148)
38 3beh_A MLL3241 protein; transm 98.2 2.5E-07 8.7E-12 103.8 1.7 82 772-870 139-220 (355)
39 4gx0_A TRKA domain protein; me 98.1 1.2E-06 4E-11 104.5 3.9 50 808-859 50-99 (565)
40 2r9r_B Paddle chimera voltage 98.0 1.7E-06 5.8E-11 103.5 2.7 80 806-887 372-454 (514)
41 1lnq_A MTHK channels, potassiu 97.9 7.3E-07 2.5E-11 99.4 -2.3 60 808-869 44-103 (336)
42 3um7_A Potassium channel subfa 97.7 2.3E-05 7.8E-10 89.0 4.5 57 808-866 114-170 (309)
43 3ukm_A Potassium channel subfa 97.5 4E-05 1.4E-09 86.0 4.1 61 807-869 91-151 (280)
44 3um7_A Potassium channel subfa 97.0 0.00045 1.5E-08 78.6 4.5 63 808-870 223-289 (309)
45 3ukm_A Potassium channel subfa 96.9 0.00068 2.3E-08 76.2 4.8 54 808-861 200-258 (280)
46 3rvy_A ION transport protein; 95.6 0.0031 1E-07 69.2 1.3 65 806-870 177-245 (285)
47 2k1e_A Water soluble analogue 73.3 1.6 5.5E-05 41.7 2.5 29 308-338 71-99 (103)
48 2a9h_A Voltage-gated potassium 53.2 9.5 0.00032 39.3 3.9 28 309-338 116-143 (155)
49 1tbx_A ORF F-93, hypothetical 48.3 8.4 0.00029 35.5 2.4 35 1261-1311 64-98 (99)
50 4dxw_A Navrh, ION transport pr 46.7 8.9 0.00031 40.6 2.6 64 806-869 162-228 (229)
51 4fx0_A Probable transcriptiona 44.3 20 0.00068 35.7 4.5 18 1263-1280 94-111 (148)
52 3f3x_A Transcriptional regulat 37.3 28 0.00096 33.4 4.2 18 1263-1280 93-110 (144)
53 4aik_A Transcriptional regulat 32.1 18 0.00063 36.0 2.0 20 1262-1281 88-107 (151)
54 3eff_K Voltage-gated potassium 31.6 15 0.00051 36.5 1.3 27 309-337 72-98 (139)
55 3jw4_A Transcriptional regulat 23.6 40 0.0014 32.6 2.7 20 1262-1281 99-118 (148)
56 1ixc_A CBNR, LYSR-type regulat 21.9 34 0.0012 35.7 1.9 17 1261-1277 52-68 (294)
57 2ih3_C Voltage-gated potassium 21.8 22 0.00074 35.0 0.4 28 309-338 93-120 (122)
58 3fm5_A Transcriptional regulat 21.3 38 0.0013 32.9 1.9 19 1263-1281 97-115 (150)
59 3oop_A LIN2960 protein; protei 20.1 43 0.0015 32.1 2.1 20 1262-1281 93-112 (143)
60 3e6m_A MARR family transcripti 20.0 40 0.0014 33.2 1.9 20 1262-1281 109-128 (161)
No 1
>2rjb_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Shigella flexneri}
Probab=100.00 E-value=2.3e-111 Score=957.27 Aligned_cols=306 Identities=50% Similarity=0.803 Sum_probs=256.7
Q ss_pred CChhHHHHHHHHHHHHhhhhhcCChhhHHHHHHHhcHHHHhcCCccccc--ccccccccccccccccccCCHHHHHHHHH
Q psy4010 1108 MSPNAIRKLFSQSMSEMYKKQVPQYSTLLELVRQVNLDTLANSGKLDEM--SAEDLERLNEERHGAIRLGTPEELYNIRR 1185 (1527)
Q Consensus 1108 ~~~~~~R~~f~~ams~mY~~EVP~Y~~L~~lv~~vn~~~l~~~~~~~~~--~~~~~~rl~~ERHGAIR~Gt~~El~~~~r 1185 (1527)
|++|+||++||+|||+||++|||+|+|||++|.+||+.||+++|.+..+ ..|+|+||++|||||||||||+||++++|
T Consensus 5 v~~d~~Ra~Fa~Ams~MY~~EVPlY~~Llelv~~vn~~vl~~~~~~~~~~~~~g~l~Rl~~ERHGAIR~Gt~~ELa~~~R 84 (455)
T 2rjb_A 5 ITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRR 84 (455)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCTTGGGTCEEEEEEESCHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHhcCchhhhhhhhcCcchhccccccCCcCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887654 79999999999999999999999999999
Q ss_pred HHHhhCCeecccccCCCCCCCceecccccCChhhhhcCCcchhhhhhhhhhccchhhc----------------------
Q psy4010 1186 LFSVMNMHPVGYYDLSTAGVPVHSTAFRSIDAYALNQSPFRVFTSLLRLELIEDKVEQ---------------------- 1243 (1527)
Q Consensus 1186 ~favmgM~pVgyYDl~~agvPvhsTaFRp~~~~~L~~npFrvftslLr~eli~~~~~~---------------------- 1243 (1527)
|||+|||+|||||||++||||||||||||+|+++|++|||||||||||+|||+|+.-+
T Consensus 85 iFa~mGm~pvGyYdL~~agvPvhstAFRp~d~~~La~nPFRvFtSlLr~el~~d~~lr~~a~~iL~~R~iftpr~~~Ll~ 164 (455)
T 2rjb_A 85 MFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLE 164 (455)
T ss_dssp HHHTTTCEEEEEECGGGGTCSEEEEEEECCSHHHHHHCCCEEEEEEECGGGCSSHHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred HHHHcCCcccccccCcccCCCceeeeeccCCHHHHhcCCceeeeeccchhhcCCHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999966400
Q ss_pred ----------------------------------------------------cCCCcc----------------------
Q psy4010 1244 ----------------------------------------------------SDSPHE---------------------- 1249 (1527)
Q Consensus 1244 ----------------------------------------------------~~~~h~---------------------- 1249 (1527)
-+||||
T Consensus 165 ~~e~~ggL~~~~A~~fv~~al~~F~w~~~a~v~~~~Y~~L~~~h~~~AdI~~f~g~hiNHLTpRvlDId~vq~~M~~~Gi 244 (455)
T 2rjb_A 165 EYEQQGGFNETQAQEFVQEALETFRWHQLATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGI 244 (455)
T ss_dssp HHHHHSSCBHHHHHHHHHHHHHHHCCCSBCSSCHHHHHHHHHHCHHHHHHHSSSSCCCSEEEEBCSCHHHHHHHTGGGTC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHhhHHhhhhhccCCcccccCCCcccCHHHHHHHHHHcCC
Confidence 057772
Q ss_pred -------------------------------------cccccccchhhccccccChhhHHHHHHHHHHhhccCCCCCCCC
Q psy4010 1250 -------------------------------------AKHTARFGEVEQRGIALTAKGRQLYDYLLDKTRGSFKGIPDET 1292 (1527)
Q Consensus 1250 -------------------------------------g~HtARFGeieqRg~AlT~kGr~lYd~ll~~~~~~~~~~~~~~ 1292 (1527)
|+||||||||||||+|||||||+|||+||++ .+.+.
T Consensus 245 ~~K~~IEgpp~r~~PILLRQTSFkAl~e~~~F~~~~~GshtaRFgEieqRG~ALTpkGR~LYD~lL~~-------~~~~~ 317 (455)
T 2rjb_A 245 EPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRN-------AGTGQ 317 (455)
T ss_dssp CCCSCCBSSCCCSSCBSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECBCBCHHHHHHHHHHHTT-------C----
T ss_pred CcccceeCCCCCCCCeeeeecccccccccccccCCCCCceeeeeeeeeecccccChhHHHHHHHHHhh-------ccccc
Confidence 9999999999999999999999999999987 23455
Q ss_pred CHHHHHHHHhcccccCCCChHHHHhcccEeEEEEeCCCCCCCCCCCCCcCCcccccccccCCCCCCccccCCCCCCCCCc
Q psy4010 1293 NSKLYMENLASNFSVFPDDLNTLRKEKLAYFNYYVTDKEPYFGGPKPISLGGFIFVPLLCGDSSSPVYHCLDSCPPPQWN 1372 (1527)
Q Consensus 1293 ~~~~~~~~l~~~F~~fPD~~~~lr~~~Layf~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1372 (1527)
++..|+++|+++|++|||||++||+||||||+|++|++|... +
T Consensus 318 ~~~~~~~~l~~~f~~fPd~~~~Lr~qgLayF~Y~~t~~g~~~---~---------------------------------- 360 (455)
T 2rjb_A 318 DNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAH---R---------------------------------- 360 (455)
T ss_dssp ----CHHHHHHHGGGSCCSHHHHHHTTCBCEEEEECHHHHHT---G----------------------------------
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHhCCceEEEEeccCccccc---c----------------------------------
Confidence 678899999999999999999999999999999999765210 0
Q ss_pred hhhhhcccccccCCCCCCcccceeeeccccccccccccccccccccchhhccccccccccCccccccCCCCCCHHHHHHc
Q psy4010 1373 PALLRRSHKVCAGKNSRPRSIRLCVIDRGLKLFPAHTFRRRLSNGLSESALDLYQTDHISGKSHLDKNVNDFNLDNYVRA 1452 (1527)
Q Consensus 1373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 1452 (1527)
.. .. + ..++++||++
T Consensus 361 --------------~~-------------------------~~----------------~----------~~~~~~Li~~ 375 (455)
T 2rjb_A 361 --------------QA-------------------------IH----------------P----------GDDPQPLIER 375 (455)
T ss_dssp --------------GG-------------------------CC----------------T----------TCCHHHHHHT
T ss_pred --------------cc-------------------------cC----------------C----------CcCHHHHHHC
Confidence 00 00 0 1148999999
Q ss_pred CceeEeccccccccccccccccccCCCCccccccccccCHHHHHHHhCCcCCChHHHHHHHHHHHHHhcc
Q psy4010 1453 GLIGYEGITYEDFLPVSAAGIFQSNLSTNANHHIESQSSRHDFENALGCSVRDEMKLYEDLEKKSLQDCT 1522 (1527)
Q Consensus 1453 g~~~~~pi~YEDFLPvSAagIFqSnLg~~~~~~~~~~~~~~~fe~~lg~~v~de~~lY~~~q~~Sl~~~~ 1522 (1527)
|+|.+||||||||||||||||||||||++++..+.+++||+.||++||++|+|||+||+++|++||++|+
T Consensus 376 G~v~~ePIvYEDFLP~SAAGIFqSNLg~~~~~~~~~~~~~~~fe~aLG~~v~D~~~LY~~~q~~Sl~~~~ 445 (455)
T 2rjb_A 376 GWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCG 445 (455)
T ss_dssp TSEEEEECBCCSCCCCC-------------------CTTHHHHHHHHTSCCBCHHHHHHHHHHHHHHHHT
T ss_pred CCeeeccccccccCCcchhhhhhhcCCCccccccCcchhHHHHHHhcCCccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995
No 2
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*
Probab=100.00 E-value=3.5e-83 Score=724.91 Aligned_cols=334 Identities=37% Similarity=0.606 Sum_probs=286.9
Q ss_pred ccccccceeccCCceeeEeccchhhhhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcc
Q psy4010 100 YRKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLVCSMGFLLSWIVSYDTYQTLLDTHSLVADIVCF 179 (1527)
Q Consensus 100 ~r~~r~R~V~K~G~cNV~~~nv~~~~~ryl~DiFTTLVDlrWRw~LliF~~sFl~SWlvFa~iyw~La~~H~llaDIv~f 179 (1527)
+||+|+|+|.|||+|||++.|+++++.+|++|+||||||++|||+|++|+++|+++|++||++||+++..||++++ .
T Consensus 3 ~~~~~~R~v~k~G~~nv~~~~~~~~~~~~l~Dif~tlv~l~Wr~~ll~f~~~y~~swl~Fally~~ia~~~gdl~~---~ 79 (343)
T 3spc_A 3 RRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLEN---P 79 (343)
T ss_dssp ---CCCCSBCTTSCBCCCCCSCCCCC-----CHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGC---T
T ss_pred CCcccceeEecCCcEEEEecCCCccchhHHHHHHHHHeeCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc---c
Confidence 3677899999999999999999988889999999999999999999999999999999999999999999985421 0
Q ss_pred ccCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeeccccccccccccCCCCccceeeeeeeeE
Q psy4010 180 KTPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFKALTEDIAVPGRDVGSISIFNGQFF 259 (1527)
Q Consensus 180 ~~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~Al~e~i~f~~~~~g~~s~f~gaFl 259 (1527)
. + .++|.+|+. ..+|| +.+|.
T Consensus 80 ~-~----------------------~~~~~~Cv~----------------~~~sf--------------------~~af~ 100 (343)
T 3spc_A 80 G-G----------------------DDTFKPCVL----------------QVNGF--------------------VAAFL 100 (343)
T ss_dssp T-C----------------------CSSCCCSEE----------------TCCSH--------------------HHHHH
T ss_pred c-c----------------------ccccccccc----------------ccCCH--------------------HHHhh
Confidence 0 0 013455543 34555 45889
Q ss_pred EEeeeeeeeeeeeccccccccccccccccccccceeeeeccccchhhhh-hhhhhhhhHHHHHHHHHHHHHhhhcCCCCC
Q psy4010 260 LRGLTEGTVTAKVLSSRNRREKEDRIGSDEIPVCGVQYVGDYCTLCHRH-GKQANLNDLSRLQAFMTGLVFAKVARPKQR 338 (1527)
Q Consensus 260 fs~eTqtTig~~~~~~~~~~Etq~tigteecp~yG~r~vt~~C~~~i~l-~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkR 338 (1527)
||++|+|||| ||.+++++.||.+.++ .+|+++| +++.|+++|++||||+||++|
T Consensus 101 fSv~T~TTvG-----------------------YGd~~p~~~~~~~~~l~~~~~l~G--~~l~a~~~giv~ak~srp~~r 155 (343)
T 3spc_A 101 FSIETQTTIG-----------------------YGFRCVTEECPLAVFMVVVQSIVG--CIIDSFMIGAIMAKMARPKKR 155 (343)
T ss_dssp HHHHHHSCCC-----------------------CSSSEECSSCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHSCSCC
T ss_pred eeeeeeEeec-----------------------CCCccCCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhHHhh
Confidence 9999888876 6788888899998884 5999998 999999999999999999999
Q ss_pred CCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhhhhcccccccccc
Q psy4010 339 TQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDAVLQSTEFSSTTS 418 (1527)
Q Consensus 339 a~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~~~q~~e~~~~ts 418 (1527)
++||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.++..+.+++
T Consensus 156 ~~ti~FS~~AVI~~~dG~~~LmfRv~n~R-~~~liea~vr~~l~r~~~t~eGe~~~l~~~~l~----------------- 217 (343)
T 3spc_A 156 AQTLLFSHNAVVAMRDGKLCLMWRVGNLR-KSHIVEAHVRAQLIKPRITEEGEYIPLDQIDID----------------- 217 (343)
T ss_dssp CCCEEECSCEEEEEETTEEEEEEEEEESS-SSCEEEEEEEEEEEEEEECTTSCEEEEEEEEEC-----------------
T ss_pred cCcEEeccceEEecCCCcEEEEEEEecCC-CCeEEEEEEEEEEEEEEEcCCCcEEeeEEEEee-----------------
Confidence 99999999999999999999999999999 789999999999999999999999864443333
Q ss_pred cccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceEEEeeecCCCccc
Q psy4010 419 TYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEIL 498 (1527)
Q Consensus 419 ~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTvQARTSYlp~EIL 498 (1527)
+..|.+.+++||.||+||+|+|||+||||++++++|.+++|||||+|+|+||+|||++||||||+++||+
T Consensus 218 ----------~~~d~~~~~~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~t~qaR~SY~~~eI~ 287 (343)
T 3spc_A 218 ----------VGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEIL 287 (343)
T ss_dssp ----------SSGGGTTTBCCCSSCEEEEEECCTTSTTTTCCHHHHTTCCCEEEEEEEEEETTTCSEEEEEEEEEGGGEE
T ss_pred ----------ecccCCCCcceeeccEEEEEeCCCCCCcccCCHHHHhhCCeEEEEEEEEEecccCcEEEEEEEEchHHee
Confidence 2234456779999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhhhchhh
Q psy4010 499 WGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRHKRASR 556 (1527)
Q Consensus 499 WGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~~~~~~ 556 (1527)
|||||+||+..++|.|.|||++||++.|.. ++|.|+|+ .+++++..-++.
T Consensus 288 wg~rF~~ii~~~~g~~~vD~s~F~~~~~v~--~tp~csa~------~~~~~~~~~~~~ 337 (343)
T 3spc_A 288 WGHRFEPVLFEEKNQYKVDYSHFHKTYEVP--STPRCSAK------DLVENKFLLSNS 337 (343)
T ss_dssp ETEEECCCEEEETTEEEECGGGTTCEEECT--TSCCSCHH------HHHHHHHHHHHC
T ss_pred cCCEeeeeEEcCCCeEEEEhHHcCCcccCC--CCCCCCHH------HHhhhhhhcCCc
Confidence 999999999988899999999999999976 49999999 677765554433
No 3
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*
Probab=100.00 E-value=8.3e-83 Score=721.18 Aligned_cols=336 Identities=35% Similarity=0.606 Sum_probs=291.5
Q ss_pred cccccceeccCCceeeEeccchhhhhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccc
Q psy4010 101 RKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLVCSMGFLLSWIVSYDTYQTLLDTHSLVADIVCFK 180 (1527)
Q Consensus 101 r~~r~R~V~K~G~cNV~~~nv~~~~~ryl~DiFTTLVDlrWRw~LliF~~sFl~SWlvFa~iyw~La~~H~llaDIv~f~ 180 (1527)
||+|+|+|.|||+|||+++|+ +++.+|++|+||||||++|||+|++|+++|+++|++||++||++++.||+++
T Consensus 3 ~~~~~R~v~k~G~~nv~~~~~-~~~~~~~~D~f~tlv~l~Wr~~llif~~~y~~swl~Fa~ly~~ia~~~Gdl~------ 75 (340)
T 3sya_A 3 KRKIQRYVRKDGKCNVHHGNV-RETYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMD------ 75 (340)
T ss_dssp ---CCCSBCTTSCBCCCCCCC-CCTHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT------
T ss_pred CcccceEEecCCcEEEEEcCc-ccchHHHHhHHHHheeCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc------
Confidence 566889999999999999999 5677899999999999999999999999999999999999999999998542
Q ss_pred cCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeeccccccccccccCCCCccceeeeeeeeEE
Q psy4010 181 TPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFKALTEDIAVPGRDVGSISIFNGQFFL 260 (1527)
Q Consensus 181 ~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~Al~e~i~f~~~~~g~~s~f~gaFlf 260 (1527)
|..| .+|.+|+.+ .+|| ..+|.|
T Consensus 76 -----~~~~----------------~~~~~Cv~~----------------~~sf--------------------~~af~f 98 (340)
T 3sya_A 76 -----HIED----------------PSWTPCVTN----------------LNGF--------------------VSAFLF 98 (340)
T ss_dssp -----CSSC----------------SSCCCSBSC----------------CCST--------------------THHHHH
T ss_pred -----cccc----------------ccccchhcc----------------ccCH--------------------HHHHhh
Confidence 1111 145666543 3444 458899
Q ss_pred Eeeeeeeeeeeeccccccccccccccccccccceeeeeccccchhhhh-hhhhhhhhHHHHHHHHHHHHHhhhcCCCCCC
Q psy4010 261 RGLTEGTVTAKVLSSRNRREKEDRIGSDEIPVCGVQYVGDYCTLCHRH-GKQANLNDLSRLQAFMTGLVFAKVARPKQRT 339 (1527)
Q Consensus 261 s~eTqtTig~~~~~~~~~~Etq~tigteecp~yG~r~vt~~C~~~i~l-~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkRa 339 (1527)
|++|+|||| ||.++++++||.++++ .+|+++| +++.|+++|++||||+||++|+
T Consensus 99 Sv~T~TTvG-----------------------YGd~~p~~~~~~g~~l~~~~~l~G--~~l~a~~~giv~ak~srp~~ra 153 (340)
T 3sya_A 99 SIETETTIG-----------------------YGYRVITDKCPEGIILLLIQSVLG--SIVNAFMVGCMFVKISQPKKRA 153 (340)
T ss_dssp HHHHHSCCC-----------------------CSSSCBCTTCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCGGGGG
T ss_pred hheeeeeec-----------------------CCCccCcCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhHHhhcC
Confidence 999888876 6778888899999884 5999998 9999999999999999999999
Q ss_pred CeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhhhhccccccccccc
Q psy4010 340 QTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDAVLQSTEFSSTTST 419 (1527)
Q Consensus 340 ~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~~~q~~e~~~~ts~ 419 (1527)
+||+||++|||+++||++||||||||+| +++|+||+||+++++.++|+|||.++..+++++
T Consensus 154 ~ti~FS~~AVI~~~dG~~~LmfRv~n~R-~~~liea~vr~~l~~~~~t~eGe~~~l~~~~l~------------------ 214 (340)
T 3sya_A 154 ETLVFSTHAVISMRDGKLCLMFRVGDLR-NSHIVEASIRAKLIKSKQTSEGEFIPLNQTDIN------------------ 214 (340)
T ss_dssp GGEEECSCEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEECCEECTTSCEETTCEEEEC------------------
T ss_pred ceEEecceEEEeccCCeEEEEEEEecCC-CCeEEEEEEEEEEEEEEecCCCceEeeEEeeec------------------
Confidence 9999999999999999999999999999 689999999999999999999998864433332
Q ss_pred ccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceEEEeeecCCCcccc
Q psy4010 420 YVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILW 499 (1527)
Q Consensus 420 ~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTvQARTSYlp~EILW 499 (1527)
+..|.+++++||.||+||+|+|||+||||++++++|++++|||+|+|+|+||+|||++||||||+++||+|
T Consensus 215 ---------~~~d~~~~~~fl~~p~tv~H~Ide~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~t~qaR~SY~~~eI~w 285 (340)
T 3sya_A 215 ---------VGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILW 285 (340)
T ss_dssp ---------SSTTTTTTSCCCSSCEEEEEECCTTSTTTTCCTTTGGGCCCEEEEEEEEEESSSCCEEEEEEEEEGGGEEE
T ss_pred ---------eeccCCCCcceeeccEEEEEECCCCCCccccChhHHhhCCeEEEEEEEEEeccccceEEEEEEEcHHHEec
Confidence 23345567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhhhchhhhHHhhh
Q psy4010 500 GHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRHKRASRAEEELF 562 (1527)
Q Consensus 500 GhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (1527)
||||+||++.++|.|+|||++||++.|.. +|.|+|| .+++.++.+.+...|-||
T Consensus 286 g~rF~~ii~~~~g~~~vD~s~F~~~~~v~---~p~csa~------~~~~~~~~~~~~~~~~~~ 339 (340)
T 3sya_A 286 GYRFTPVLTLEDGFYEVDYNSFHETYETS---TPSLSAK------ELAELANRAESNSLEVLF 339 (340)
T ss_dssp TEEECCCEEEETTEEEECGGGSSCEEECC---CCCSCHH------HHHHHHHHHHTC------
T ss_pred CCEeceeEEcCCCeEEEEhHHcCcceEcC---CCCCCHH------HHHHHHhhccCccceeec
Confidence 99999999988899999999999999976 9999999 788887776666555554
No 4
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*
Probab=100.00 E-value=3.3e-82 Score=716.97 Aligned_cols=318 Identities=47% Similarity=0.806 Sum_probs=295.1
Q ss_pred cccccCceeccCCceeEEEcCcccccccccccccceeeecchhHHhhh-hhcccccccccccccccCCcccccchhhhhh
Q psy4010 638 YRKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLL-ALSYPVLKSTCPAQFKLLSPEHNWARFSRFR 716 (1527)
Q Consensus 638 ~~~~~~R~i~k~G~~ni~~~~~~~~~~~~~~Dif~tlv~~~Wr~~~l~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1527)
+|+.++|+++|||+|||.+.|+++++.+|++|+||||||++|||++++ +++|
T Consensus 3 ~~~~~~R~v~k~G~~nv~~~~~~~~~~~~l~Dif~tlv~l~Wr~~ll~f~~~y--------------------------- 55 (343)
T 3spc_A 3 RRKCRNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAF--------------------------- 55 (343)
T ss_dssp ---CCCCSBCTTSCBCCCCCSCCCCC-----CHHHHHHHSCHHHHHHHHHHHH---------------------------
T ss_pred CCcccceeEecCCcEEEEecCCCccchhHHHHHHHHHeeCcHHHHHHHHHHHH---------------------------
Confidence 456788999999999999999988888999999999999999999999 8999
Q ss_pred hhhhhccccccccccCCCcccccccccCCCCCCCCCCcccceEeechhhhhcccCceeeehhhHHHHhhhcCCccccCCC
Q psy4010 717 LHLVAASVHTSNQVAKHPNVHISRALGCSSPMSLRPGKIENRYGSFSEQLALSYPVLKSFACIWWLLAYTHGDVLSENQN 796 (1527)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~l~~~villFAlIYylIa~~hGDl~~~~~~ 796 (1527)
+++| ++||++||++++.|||+...+ .
T Consensus 56 ------------------------------------------~~sw-----------l~Fally~~ia~~~gdl~~~~-~ 81 (343)
T 3spc_A 56 ------------------------------------------LVSW-----------LLFGLIFWLIALIHGDLENPG-G 81 (343)
T ss_dssp ------------------------------------------HHHH-----------HHHHHHHHHHHHHHTGGGCTT-C
T ss_pred ------------------------------------------HHHH-----------HHHHHHHHHHHhcCCcccccc-c
Confidence 8999 999999999999999986432 2
Q ss_pred CCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccceeee
Q psy4010 797 NPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQRTQTLLF 876 (1527)
Q Consensus 797 ~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkRA~TIlF 876 (1527)
+++|+||+.++.+|.+|||||++|+||||||+++|+++||.|++++++|+++|++++|+++|++|+||+||++|++||+|
T Consensus 82 ~~~~~~Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~~~~l~~~~~l~G~~l~a~~~giv~ak~srp~~r~~ti~F 161 (343)
T 3spc_A 82 DDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLF 161 (343)
T ss_dssp CSSCCCSEETCCSHHHHHHHHHHHHSCCCCSSSEECSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCCCEEE
T ss_pred cccccccccccCCHHHHhheeeeeeEeecCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhcCcEEe
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCceeeecceEEEEecC
Q psy4010 877 SRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSDIFLLWPTIVVHRID 956 (1527)
Q Consensus 877 Sk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~~fL~lPwTVvHvID 956 (1527)
|++|||+++||++|||||+||+| +++|+||+||++|++.++|+|||.++.++.+|++.+|.+.+++||.+||||+|+||
T Consensus 162 S~~AVI~~~dG~~~LmfRv~n~R-~~~liea~vr~~l~r~~~t~eGe~~~l~~~~l~~~~d~~~~~~fl~~p~tv~H~ID 240 (343)
T 3spc_A 162 SHNAVVAMRDGKLCLMWRVGNLR-KSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIN 240 (343)
T ss_dssp CSCEEEEEETTEEEEEEEEEESS-SSCEEEEEEEEEEEEEEECTTSCEEEEEEEEECSSGGGTTTBCCCSSCEEEEEECC
T ss_pred ccceEEecCCCcEEEEEEEecCC-CCeEEEEEEEEEEEEEEEcCCCcEEeeEEEEeeecccCCCCcceeeccEEEEEeCC
Confidence 99999999999999999999999 99999999999999999999999999889999999998888999999999999999
Q ss_pred CCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc--ceeeeeeecccccCccc
Q psy4010 957 EESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK--QLVTSSIHMFVPNGLSK 1034 (1527)
Q Consensus 957 E~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k--~iD~~~Fh~v~P~~l~~ 1034 (1527)
|+||||++++++|.++++||+|+++|+||+|||++|||+||.++||+|||||+||++.+++ .+|+++||+++|.+..-
T Consensus 241 e~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~t~qaR~SY~~~eI~wg~rF~~ii~~~~g~~~vD~s~F~~~~~v~~tp 320 (343)
T 3spc_A 241 EDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPSTP 320 (343)
T ss_dssp TTSTTTTCCHHHHTTCCCEEEEEEEEEETTTCSEEEEEEEEEGGGEEETEEECCCEEEETTEEEECGGGTTCEEECTTSC
T ss_pred CCCCcccCCHHHHhhCCeEEEEEEEEEecccCcEEEEEEEEchHHeecCCEeeeeEEcCCCeEEEEhHHcCCcccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999986544 48999999999976566
Q ss_pred ccc
Q psy4010 1035 ECK 1037 (1527)
Q Consensus 1035 ~c~ 1037 (1527)
.|+
T Consensus 321 ~cs 323 (343)
T 3spc_A 321 RCS 323 (343)
T ss_dssp CSC
T ss_pred CCC
Confidence 677
No 5
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*
Probab=100.00 E-value=1.3e-81 Score=711.44 Aligned_cols=314 Identities=42% Similarity=0.797 Sum_probs=295.5
Q ss_pred ccccCceeccCCceeEEEcCcccccccccccccceeeecchhHHhhh-hhcccccccccccccccCCcccccchhhhhhh
Q psy4010 639 RKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLL-ALSYPVLKSTCPAQFKLLSPEHNWARFSRFRL 717 (1527)
Q Consensus 639 ~~~~~R~i~k~G~~ni~~~~~~~~~~~~~~Dif~tlv~~~Wr~~~l~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1527)
||+++|+++|||+|||.+.|+ +++.+|++|+||||||++|||++++ +++|
T Consensus 3 ~~~~~R~v~k~G~~nv~~~~~-~~~~~~~~D~f~tlv~l~Wr~~llif~~~y---------------------------- 53 (340)
T 3sya_A 3 KRKIQRYVRKDGKCNVHHGNV-RETYRYLTDIFTTLVDLKWRFNLLIFVMVY---------------------------- 53 (340)
T ss_dssp ---CCCSBCTTSCBCCCCCCC-CCTHHHHHTHHHHHHHSCHHHHHHHHHHHH----------------------------
T ss_pred CcccceEEecCCcEEEEEcCc-ccchHHHHhHHHHheeCcHHHHHHHHHHHH----------------------------
Confidence 466789999999999999998 5678999999999999999999999 8889
Q ss_pred hhhhccccccccccCCCcccccccccCCCCCCCCCCcccceEeechhhhhcccCceeeehhhHHHHhhhcCCccccCCCC
Q psy4010 718 HLVAASVHTSNQVAKHPNVHISRALGCSSPMSLRPGKIENRYGSFSEQLALSYPVLKSFACIWWLLAYTHGDVLSENQNN 797 (1527)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~l~~~villFAlIYylIa~~hGDl~~~~~~~ 797 (1527)
+++| ++||++||++++.|||+.. .++
T Consensus 54 -----------------------------------------~~sw-----------l~Fa~ly~~ia~~~Gdl~~--~~~ 79 (340)
T 3sya_A 54 -----------------------------------------TVTW-----------LFFGMIWWLIAYIRGDMDH--IED 79 (340)
T ss_dssp -----------------------------------------HHHH-----------HHHHHHHHHHHHHHTTTTC--SSC
T ss_pred -----------------------------------------HHHH-----------HHHHHHHHHHHhhcccccc--ccc
Confidence 8999 9999999999999999863 234
Q ss_pred CCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccceeeec
Q psy4010 798 PQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQRTQTLLFS 877 (1527)
Q Consensus 798 ~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkRA~TIlFS 877 (1527)
++|+||+.++.+|.+|||||++|+||||||+++|+++||.|++++++|+++|++++|+++|++|+||+||++|++||+||
T Consensus 80 ~~~~~Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~g~~l~~~~~l~G~~l~a~~~giv~ak~srp~~ra~ti~FS 159 (340)
T 3sya_A 80 PSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFS 159 (340)
T ss_dssp SSCCCSBSCCCSTTHHHHHHHHHHSCCCCSSSCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGGGGEEEC
T ss_pred ccccchhccccCHHHHHhhhheeeeeecCCCccCcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCceEEec
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCceeeecceEEEEecCC
Q psy4010 878 RTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSDIFLLWPTIVVHRIDE 957 (1527)
Q Consensus 878 k~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~~fL~lPwTVvHvIDE 957 (1527)
++|||+++||++|||||+||+| +++|+||+||++|++.+.|+|||.++.++.+|++..|.+.+++||.+||||+|+|||
T Consensus 160 ~~AVI~~~dG~~~LmfRv~n~R-~~~liea~vr~~l~~~~~t~eGe~~~l~~~~l~~~~d~~~~~~fl~~p~tv~H~Ide 238 (340)
T 3sya_A 160 THAVISMRDGKLCLMFRVGDLR-NSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQ 238 (340)
T ss_dssp SCEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEECCEECTTSCEETTCEEEECSSTTTTTTSCCCSSCEEEEEECCT
T ss_pred ceEEEeccCCeEEEEEEEecCC-CCeEEEEEEEEEEEEEEecCCCceEeeEEeeeceeccCCCCcceeeccEEEEEECCC
Confidence 9999999999999999999999 999999999999999999999999998899999999988889999999999999999
Q ss_pred CCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc--ceeeeeeecccccCcccc
Q psy4010 958 ESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK--QLVTSSIHMFVPNGLSKE 1035 (1527)
Q Consensus 958 ~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k--~iD~~~Fh~v~P~~l~~~ 1035 (1527)
+||||++|+++|.++++||+|+++|+||+|||++|||+||.++||+|||||+||++.+++ .+|+++||+++|.+ .-.
T Consensus 239 ~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~t~qaR~SY~~~eI~wg~rF~~ii~~~~g~~~vD~s~F~~~~~v~-~p~ 317 (340)
T 3sya_A 239 QSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETS-TPS 317 (340)
T ss_dssp TSTTTTCCTTTGGGCCCEEEEEEEEEESSSCCEEEEEEEEEGGGEEETEEECCCEEEETTEEEECGGGSSCEEECC-CCC
T ss_pred CCCccccChhHHhhCCeEEEEEEEEEeccccceEEEEEEEcHHHEecCCEeceeEEcCCCeEEEEhHHcCcceEcC-CCC
Confidence 999999999999999999999999999999999999999999999999999999986544 49999999999976 334
Q ss_pred cc
Q psy4010 1036 CK 1037 (1527)
Q Consensus 1036 c~ 1037 (1527)
|+
T Consensus 318 cs 319 (340)
T 3sya_A 318 LS 319 (340)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 6
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}
Probab=100.00 E-value=5.5e-67 Score=588.85 Aligned_cols=298 Identities=38% Similarity=0.648 Sum_probs=269.0
Q ss_pred ccccCceeccCCceeEEEcCcccccccccccccceeeecchhHHhhh-hhcccccccccccccccCCcccccchhhhhhh
Q psy4010 639 RKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLL-ALSYPVLKSTCPAQFKLLSPEHNWARFSRFRL 717 (1527)
Q Consensus 639 ~~~~~R~i~k~G~~ni~~~~~~~~~~~~~~Dif~tlv~~~Wr~~~l~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1527)
|+.++|+++|||+|||.+.|+++.+.+|++|+|+++++++|++++++ +++|
T Consensus 2 ~~~~~R~~~k~G~~nv~~~~~~~~~~r~l~dl~~tl~~~~~~~~ll~f~~~~---------------------------- 53 (321)
T 2qks_A 2 SKKRQRFVDKNGRCNVQHGNLGSETSRYLSDLFTTLVDLKWRWFFVSLAVLF---------------------------- 53 (321)
T ss_dssp -CCCCCSBCTTSCBCCCCCC-------CCHHHHHHHHHSCHHHHHHHHHHHH----------------------------
T ss_pred CCCccceeeeCCcEEEEEecccchhhHHHHHHHHHHHHhchhHHHHHHHHHH----------------------------
Confidence 45678999999999999999987788999999999999999999888 7777
Q ss_pred hhhhccccccccccCCCcccccccccCCCCCCCCCCcccceEeechhhhhcccCceeeehhhHHHHhhhcCCccccCCCC
Q psy4010 718 HLVAASVHTSNQVAKHPNVHISRALGCSSPMSLRPGKIENRYGSFSEQLALSYPVLKSFACIWWLLAYTHGDVLSENQNN 797 (1527)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~l~~~villFAlIYylIa~~hGDl~~~~~~~ 797 (1527)
+.+| ++|| |+ +.+||
T Consensus 54 -----------------------------------------~~~~-----------~~fa--~~---~~eg~-------- 68 (321)
T 2qks_A 54 -----------------------------------------LLLN-----------TAFA--TL---YMLGS-------- 68 (321)
T ss_dssp -----------------------------------------HHHH-----------HHHH--HH---HHTSS--------
T ss_pred -----------------------------------------HHHH-----------HHHH--HH---HHcCC--------
Confidence 6778 8888 44 23555
Q ss_pred CCCcccccccc--chhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccceee
Q psy4010 798 PQFVPCVIGVN--SFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQRTQTLL 875 (1527)
Q Consensus 798 ~~~~pCv~~v~--sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkRA~TIl 875 (1527)
.|..+.. +|.+|||||++|+||||||+++|.+ +.+.+++++++++|+++.|+++|+++++|++|++|+++++
T Consensus 69 ----~~~~~~~~~s~~~a~y~s~vT~tTVGYGDi~P~t--~~gr~~~~~~~l~G~~~~a~~~g~i~~~~~~~~~r~~~i~ 142 (321)
T 2qks_A 69 ----APIANQFPAGFGGAFFFSVETLATVGYGDMHPQT--VYAHWIATLEIFVGMSSIALATGCAFIKMSQPKKRAETLM 142 (321)
T ss_dssp ----SCBTTCSSTTHHHHHHHHHHHHTTCCCCSSCBCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCGGGTEE
T ss_pred ----ccccCcCCcchhheeeeeeEEeccccCCCcCccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 2667777 9999999999999999999999877 6899999999999999999999999999999999999999
Q ss_pred eccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCceeeecceEEEEec
Q psy4010 876 FSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSDIFLLWPTIVVHRI 955 (1527)
Q Consensus 876 FSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~~fL~lPwTVvHvI 955 (1527)
||++||||++||++|||||++|+| +++|+||+||++|++.++|+|||.++.++.+|+++.|..++.+||.+||||+|+|
T Consensus 143 fS~~avI~~~~g~~~L~fRv~n~r-~~~li~a~vr~~l~~~~~t~eGe~~~~~~~~l~l~~d~~~~~~~l~~p~tv~H~I 221 (321)
T 2qks_A 143 FSEHAVISMRDGKLTLMFRVGNLR-NSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELDVGFSTGADQLFLVSPLTICHVI 221 (321)
T ss_dssp ECSCEEEEEETTEEEEEEEEEECS-CCCEEEEEEEEEEEEEEECTTCCEEEEEEEEECSSTTTTTTBCCCSSCEEEEEEC
T ss_pred cCCceEEecCCCceEEEEEecccc-cCeeeeeEEEEEEEEEEecCCCcEEEeEEeeeecccCCCCCceEEEccEEEEEEC
Confidence 999999999999999999999999 9999999999999999999999999988889999888778899999999999999
Q ss_pred CCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc--ceeeeeeecccccCcc
Q psy4010 956 DEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK--QLVTSSIHMFVPNGLS 1033 (1527)
Q Consensus 956 DE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k--~iD~~~Fh~v~P~~l~ 1033 (1527)
||+||||++++++|.++++||+|+++|+||+|||++|||+||.++||+|||||+||++.+++ .+|+++||+++|...
T Consensus 222 d~~SPL~~~~~~~L~~~~~eivV~l~G~~e~t~~t~~ar~sY~~~eI~wg~rF~~i~~~~~~~~~vD~~~f~~~~~~~~- 300 (321)
T 2qks_A 222 DAKSPFYDLSQRSMQTEQFEVVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLEEGFFKVDYSQFHATFEVPT- 300 (321)
T ss_dssp STTSTTTTCCHHHHTTCCCEEEEEEEEEETTTTEEEEEEEEEEGGGEEETEEECCCEEECSSSEEECGGGSSCEEECCC-
T ss_pred CCCCCccccCHhHHhcCCeEEEEEEEEEehhcCcEEEEEEEEChHHeecCCEeceeeEEcCCcEEEehHHhCCceecCC-
Confidence 99999999999999999999999999999999999999999999999999999999987765 499999999998763
Q ss_pred cccc
Q psy4010 1034 KECK 1037 (1527)
Q Consensus 1034 ~~c~ 1037 (1527)
..|+
T Consensus 301 p~~s 304 (321)
T 2qks_A 301 PPYS 304 (321)
T ss_dssp CSSC
T ss_pred CCcC
Confidence 3443
No 7
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}
Probab=100.00 E-value=6.2e-66 Score=580.28 Aligned_cols=309 Identities=35% Similarity=0.548 Sum_probs=254.5
Q ss_pred cccccceeccCCceeeEeccchhhhhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccc
Q psy4010 101 RKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLVCSMGFLLSWIVSYDTYQTLLDTHSLVADIVCFK 180 (1527)
Q Consensus 101 r~~r~R~V~K~G~cNV~~~nv~~~~~ryl~DiFTTLVDlrWRw~LliF~~sFl~SWlvFa~iyw~La~~H~llaDIv~f~ 180 (1527)
|++|+|+|.|||+|||++.|+++++.+|++|+|+|+++++|++.+++|+++|+++|++|| |+ +.++ |
T Consensus 2 ~~~~~R~~~k~G~~nv~~~~~~~~~~r~l~dl~~tl~~~~~~~~ll~f~~~~~~~~~~fa--~~---~~eg---~----- 68 (321)
T 2qks_A 2 SKKRQRFVDKNGRCNVQHGNLGSETSRYLSDLFTTLVDLKWRWFFVSLAVLFLLLNTAFA--TL---YMLG---S----- 68 (321)
T ss_dssp -CCCCCSBCTTSCBCCCCCC-------CCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH--HH---HHTS---S-----
T ss_pred CCCccceeeeCCcEEEEEecccchhhHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH--HH---HHcC---C-----
Confidence 456889999999999999999877778999999999999999999999999999999999 44 2232 1
Q ss_pred cCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeec--cccccccccccCCCCccceeeeeeee
Q psy4010 181 TPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQT--SFKALTEDIAVPGRDVGSISIFNGQF 258 (1527)
Q Consensus 181 ~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~Pillrqt--SF~Al~e~i~f~~~~~g~~s~f~gaF 258 (1527)
.|..+ .+ || ..+|
T Consensus 69 -----------------------------~~~~~----------------~~~~s~--------------------~~a~ 83 (321)
T 2qks_A 69 -----------------------------APIAN----------------QFPAGF--------------------GGAF 83 (321)
T ss_dssp -----------------------------SCBTT----------------CSSTTH--------------------HHHH
T ss_pred -----------------------------ccccC----------------cCCcch--------------------hhee
Confidence 02111 01 22 3367
Q ss_pred EEEeeeeeeeeeeeccccccccccccccccccccceeeeeccccchhh---h-hhhhhhhhhHHHHHHHHHHHHHhhhcC
Q psy4010 259 FLRGLTEGTVTAKVLSSRNRREKEDRIGSDEIPVCGVQYVGDYCTLCH---R-HGKQANLNDLSRLQAFMTGLVFAKVAR 334 (1527)
Q Consensus 259 lfs~eTqtTig~~~~~~~~~~Etq~tigteecp~yG~r~vt~~C~~~i---~-l~~Q~ilg~~~lIdAfmtGLVFAKfSR 334 (1527)
.|+++|.||+|| |- .||... + .++|+++| +++.|+++|++++||+|
T Consensus 84 y~s~vT~tTVGY-----------------------GD-----i~P~t~~gr~~~~~~~l~G--~~~~a~~~g~i~~~~~~ 133 (321)
T 2qks_A 84 FFSVETLATVGY-----------------------GD-----MHPQTVYAHWIATLEIFVG--MSSIALATGCAFIKMSQ 133 (321)
T ss_dssp HHHHHHHTTCCC-----------------------CS-----SCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHS
T ss_pred eeeeEEeccccC-----------------------CC-----cCcccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 788888888873 21 133222 2 35788887 88899999999999999
Q ss_pred CCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhhhhcccccc
Q psy4010 335 PKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDAVLQSTEFS 414 (1527)
Q Consensus 335 PkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~~~q~~e~~ 414 (1527)
|++|+++++||++||||++||++|||||++|+| +++|+||+||++|++.++|+|||.++.++.+|+
T Consensus 134 ~~~r~~~i~fS~~avI~~~~g~~~L~fRv~n~r-~~~li~a~vr~~l~~~~~t~eGe~~~~~~~~l~------------- 199 (321)
T 2qks_A 134 PKKRAETLMFSEHAVISMRDGKLTLMFRVGNLR-NSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELD------------- 199 (321)
T ss_dssp CCCGGGTEEECSCEEEEEETTEEEEEEEEEECS-CCCEEEEEEEEEEEEEEECTTCCEEEEEEEEEC-------------
T ss_pred HHhhhhhhhcCCceEEecCCCceEEEEEecccc-cCeeeeeEEEEEEEEEEecCCCcEEEeEEeeee-------------
Confidence 999999999999999999999999999999999 789999999999999999999999874432222
Q ss_pred cccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceEEEeeecCC
Q psy4010 415 STTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLP 494 (1527)
Q Consensus 415 ~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTvQARTSYlp 494 (1527)
+..|.+++.++|.||+||+|+|||+||||++++++|.+++|||+|+|+|+||+|||++||||||++
T Consensus 200 --------------l~~d~~~~~~~l~~p~tv~H~Id~~SPL~~~~~~~L~~~~~eivV~l~G~~e~t~~t~~ar~sY~~ 265 (321)
T 2qks_A 200 --------------VGFSTGADQLFLVSPLTICHVIDAKSPFYDLSQRSMQTEQFEVVVILEGIVETTGMTCQARTSYTE 265 (321)
T ss_dssp --------------SSTTTTTTBCCCSSCEEEEEECSTTSTTTTCCHHHHTTCCCEEEEEEEEEETTTTEEEEEEEEEEG
T ss_pred --------------cccCCCCCceEEEccEEEEEECCCCCCccccCHhHHhcCCeEEEEEEEEEehhcCcEEEEEEEECh
Confidence 223445678999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhhhch
Q psy4010 495 SEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRHKRA 554 (1527)
Q Consensus 495 ~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~~~~ 554 (1527)
+||+|||||+||++.+++.|+|||++||++.|.. +|.|+|| .|++.+.++|
T Consensus 266 ~eI~wg~rF~~i~~~~~~~~~vD~~~f~~~~~~~---~p~~sa~------~~~~~~~~~~ 316 (321)
T 2qks_A 266 DEVLWGHRFFPVISLEEGFFKVDYSQFHATFEVP---TPPYSVK------EQEEMLLMSS 316 (321)
T ss_dssp GGEEETEEECCCEEECSSSEEECGGGSSCEEECC---CCSSCHH------HHHCC-----
T ss_pred HHeecCCEeceeeEEcCCcEEEehHHhCCceecC---CCCcCHH------HHHhhcCCCC
Confidence 9999999999999998888999999999999987 7999999 6676666654
No 8
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=100.00 E-value=3.3e-64 Score=561.81 Aligned_cols=288 Identities=26% Similarity=0.440 Sum_probs=259.4
Q ss_pred CCcccccCceeccCCceeEEEcCcccccccccccccceeeecchhHHhhh-hhcccccccccccccccCCcccccchhhh
Q psy4010 636 PFYRKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLL-ALSYPVLKSTCPAQFKLLSPEHNWARFSR 714 (1527)
Q Consensus 636 ~~~~~~~~R~i~k~G~~ni~~~~~~~~~~~~~~Dif~tlv~~~Wr~~~l~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1527)
...++.++|+++|||+|||.+.|++.+ .|++|+|+++++++|++++++ +++|
T Consensus 5 ~~~~~~~~r~~~k~G~~nv~~~~~~~~--~~l~d~~~~~l~~~~~~ll~~~~~~~------------------------- 57 (301)
T 1xl4_A 5 MKPPARKPRILNSDGSSNITRLGLEKR--GWLDDHYHDLLTVSWPVFITLITGLY------------------------- 57 (301)
T ss_dssp ------CCCSBCTTSCBCCEESSCCCC--CSSCSSTTHHHHSCHHHHHHHHHHHH-------------------------
T ss_pred cccccccceeEecCCcEEEEECCcchh--HHHHHHHHHHHHhhHHHHHHHHHHHH-------------------------
Confidence 344556789999999999999998543 378999999999999999998 7888
Q ss_pred hhhhhhhccccccccccCCCcccccccccCCCCCCCCCCcccceEeechhhhhcccCceeeehhhHHHHhhhcCCccccC
Q psy4010 715 FRLHLVAASVHTSNQVAKHPNVHISRALGCSSPMSLRPGKIENRYGSFSEQLALSYPVLKSFACIWWLLAYTHGDVLSEN 794 (1527)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~l~~~villFAlIYylIa~~hGDl~~~~ 794 (1527)
++.| ++||++||+++ +++.
T Consensus 58 --------------------------------------------~~~~-----------l~fa~ly~~~~---~~~~--- 76 (301)
T 1xl4_A 58 --------------------------------------------LVTN-----------ALFALAYLACG---DVIE--- 76 (301)
T ss_dssp --------------------------------------------HHHH-----------HHHHHHHHHTC---SCST---
T ss_pred --------------------------------------------HHHH-----------HHHHHHHHhhc---cccC---
Confidence 7788 99999999874 1110
Q ss_pred CCCCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccee
Q psy4010 795 QNNPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQRTQTL 874 (1527)
Q Consensus 795 ~~~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkRA~TI 874 (1527)
..+..+|.+|||||++|+||||||+++| .|+.|.+++++|+++|+++.|+++|+++++++||++| +
T Consensus 77 ---------~~~~~s~~~a~yfs~vT~tTvGYGDi~P--~t~~gr~~~~~~~l~G~~~~a~~~g~v~~~~~~~~~r---~ 142 (301)
T 1xl4_A 77 ---------NARPGSFTDAFFFSVQTMATIGYGKLIP--IGPLANTLVTLEALCGMLGLAVAASLIYARFTRPTAG---V 142 (301)
T ss_dssp ---------TSCTTCHHHHHHHHHHHHTTCCCSSSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC---E
T ss_pred ---------CCCcCCHHHHHHHhhhheeccCCCCCcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh---h
Confidence 1245799999999999999999999986 5689999999999999999999999999999999998 9
Q ss_pred eeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCceeeecceEEEEe
Q psy4010 875 LFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSDIFLLWPTIVVHR 954 (1527)
Q Consensus 875 lFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~~fL~lPwTVvHv 954 (1527)
.||++||||++||++|||||++|+| +++|+|++||+++++.++|+|||.+ +.+++|+|++++ .++|.+|||++|+
T Consensus 143 ~fs~~~vI~~~~g~~~l~~R~~n~r-~~~li~a~vr~~l~~~~~t~eGe~~-~~~~~L~l~~~~---~~~l~~p~~v~H~ 217 (301)
T 1xl4_A 143 LFSSRMVISDFEGKPTLMMRLANLR-IEQIIEADVHLVLVRSEISQEGMVF-RRFHDLTLTRSR---SPIFSLSWTVMHP 217 (301)
T ss_dssp EECSCEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEEEEEECTTSCEE-EEEEECCCSCCE---EEEECSEEEEEEE
T ss_pred ccCCeEEEecCCCcceeeeeccccc-cceEEccEEEEEEEEeeEcCCCcEE-EEEeccccccCC---eEEEEeeEEEEEe
Confidence 9999999999999999999999999 9999999999999999999999998 456999998865 5999999999999
Q ss_pred cCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc---ceeeeeeeccccc
Q psy4010 955 IDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK---QLVTSSIHMFVPN 1030 (1527)
Q Consensus 955 IDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k---~iD~~~Fh~v~P~ 1030 (1527)
|||+||||++++++|.++++||+|+++|+||+|||++|||+||.++||+|||||+||+..+++ .+|+++||+++|-
T Consensus 218 Id~~SPL~~~s~~~L~~~~~eivV~l~G~de~t~~~~~ar~sY~~~eI~wg~rF~~~~~~~~~g~~~vD~~~f~~~~~~ 296 (301)
T 1xl4_A 218 IDHHSPIYGETDETLRNSHSEFLVLFTGHHEAFAQNVHARHAYSCDEIIWGGHFVDVFTTLPDGRRALDLGKFHEIAQH 296 (301)
T ss_dssp CCTTCTTTTCCHHHHHHHTCEEEEEEEEEETTTTEEEEEEEEEEGGGEEETCEECCCEEECTTSCEEECTTSTTCEECC
T ss_pred cCCCCCcccCCHhHHhcCCeEEEEEEEEEecccCcEEEEEEeecHHHeeeCCEecceeeECCCCcEEEEhHHhcCcccc
Confidence 999999999999999999999999999999999999999999999999999999999987644 4999999999885
No 9
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=100.00 E-value=1.5e-61 Score=540.58 Aligned_cols=287 Identities=24% Similarity=0.406 Sum_probs=244.7
Q ss_pred cccccceeccCCceeeEeccchhhhhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhccc
Q psy4010 101 RKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLVCSMGFLLSWIVSYDTYQTLLDTHSLVADIVCFK 180 (1527)
Q Consensus 101 r~~r~R~V~K~G~cNV~~~nv~~~~~ryl~DiFTTLVDlrWRw~LliF~~sFl~SWlvFa~iyw~La~~H~llaDIv~f~ 180 (1527)
.++|+|+|.|||+|||++.|++.+ .|++|+|+++++++|||++++|+++|+++|++||.+||++. | ++
T Consensus 8 ~~~~~r~~~k~G~~nv~~~~~~~~--~~l~d~~~~~l~~~~~~ll~~~~~~~~~~~l~fa~ly~~~~-------~--~~- 75 (301)
T 1xl4_A 8 PARKPRILNSDGSSNITRLGLEKR--GWLDDHYHDLLTVSWPVFITLITGLYLVTNALFALAYLACG-------D--VI- 75 (301)
T ss_dssp ---CCCSBCTTSCBCCEESSCCCC--CSSCSSTTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTC-------S--CS-
T ss_pred ccccceeEecCCcEEEEECCcchh--HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-------c--cc-
Confidence 456889999999999999998743 38999999999999999999999999999999999998632 0 00
Q ss_pred cCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeeccccccccccccCCCCccceeeeeeeeEE
Q psy4010 181 TPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFKALTEDIAVPGRDVGSISIFNGQFFL 260 (1527)
Q Consensus 181 ~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~Al~e~i~f~~~~~g~~s~f~gaFlf 260 (1527)
++. ...| +..+|.|
T Consensus 76 --------------------------------~~~--------------~~~s--------------------~~~a~yf 89 (301)
T 1xl4_A 76 --------------------------------ENA--------------RPGS--------------------FTDAFFF 89 (301)
T ss_dssp --------------------------------TTS--------------CTTC--------------------HHHHHHH
T ss_pred --------------------------------CCC--------------CcCC--------------------HHHHHHH
Confidence 000 0012 2346778
Q ss_pred Eeeeeeeeeeeeccccccccccccccccccccceeeeeccccchhhh-hhhhhhhhhHHHHHHHHHHHHHhhhcCCCCCC
Q psy4010 261 RGLTEGTVTAKVLSSRNRREKEDRIGSDEIPVCGVQYVGDYCTLCHR-HGKQANLNDLSRLQAFMTGLVFAKVARPKQRT 339 (1527)
Q Consensus 261 s~eTqtTig~~~~~~~~~~Etq~tigteecp~yG~r~vt~~C~~~i~-l~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkRa 339 (1527)
+++|.||+| ||- ++..|+.+.+ .++|+++| +++.|+++|++++||+||++|
T Consensus 90 s~vT~tTvG-----------------------YGD--i~P~t~~gr~~~~~~~l~G--~~~~a~~~g~v~~~~~~~~~r- 141 (301)
T 1xl4_A 90 SVQTMATIG-----------------------YGK--LIPIGPLANTLVTLEALCG--MLGLAVAASLIYARFTRPTAG- 141 (301)
T ss_dssp HHHHHTTCC-----------------------CSS--SCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTCCCCC-
T ss_pred hhhheeccC-----------------------CCC--CcCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhHHhh-
Confidence 888888877 342 3345777666 45899997 889999999999999999998
Q ss_pred CeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhhhhccccccccccc
Q psy4010 340 QTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDAVLQSTEFSSTTST 419 (1527)
Q Consensus 340 ~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~~~q~~e~~~~ts~ 419 (1527)
+.||++||||.+||++|||||++|+| |++|++++||+++++.++|+|||.+.++ ++|+
T Consensus 142 --~~fs~~~vI~~~~g~~~l~~R~~n~r-~~~li~a~vr~~l~~~~~t~eGe~~~~~-~~L~------------------ 199 (301)
T 1xl4_A 142 --VLFSSRMVISDFEGKPTLMMRLANLR-IEQIIEADVHLVLVRSEISQEGMVFRRF-HDLT------------------ 199 (301)
T ss_dssp --EEECSCEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEEEEEECTTSCEEEEE-EECC------------------
T ss_pred --hccCCeEEEecCCCcceeeeeccccc-cceEEccEEEEEEEEeeEcCCCcEEEEE-eccc------------------
Confidence 99999999999999999999999999 7899999999999999999999987432 3333
Q ss_pred ccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceEEEeeecCCCcccc
Q psy4010 420 YVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILW 499 (1527)
Q Consensus 420 ~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTvQARTSYlp~EILW 499 (1527)
++. ++.++|.+|+||+|+|||+||||++++++|.+++|||+|+|||+||+|||++|||+||.++||+|
T Consensus 200 -----------l~~-~~~~~l~~p~~v~H~Id~~SPL~~~s~~~L~~~~~eivV~l~G~de~t~~~~~ar~sY~~~eI~w 267 (301)
T 1xl4_A 200 -----------LTR-SRSPIFSLSWTVMHPIDHHSPIYGETDETLRNSHSEFLVLFTGHHEAFAQNVHARHAYSCDEIIW 267 (301)
T ss_dssp -----------CSC-CEEEEECSEEEEEEECCTTCTTTTCCHHHHHHHTCEEEEEEEEEETTTTEEEEEEEEEEGGGEEE
T ss_pred -----------ccc-CCeEEEEeeEEEEEecCCCCCcccCCHhHHhcCCeEEEEEEEEEecccCcEEEEEEeecHHHeee
Confidence 222 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccceecC-CCcccccccccccchhh
Q psy4010 500 GHRFEPLVRKD-KPCDKPHFKSYDDLINE 527 (1527)
Q Consensus 500 GhRF~piV~~d-kg~y~IDfskFd~viP~ 527 (1527)
||||+||+..+ +|.|.|||++||++.|-
T Consensus 268 g~rF~~~~~~~~~g~~~vD~~~f~~~~~~ 296 (301)
T 1xl4_A 268 GGHFVDVFTTLPDGRRALDLGKFHEIAQH 296 (301)
T ss_dssp TCEECCCEEECTTSCEEECTTSTTCEECC
T ss_pred CCEecceeeECCCCcEEEEhHHhcCcccc
Confidence 99999999986 68899999999999885
No 10
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*
Probab=100.00 E-value=5.2e-62 Score=550.81 Aligned_cols=290 Identities=25% Similarity=0.389 Sum_probs=234.2
Q ss_pred cccccCceeccCCceeEEEcCcccccccccccccceeeecchhHHhhh-hhcccccccccccccccCCcccccchhhhhh
Q psy4010 638 YRKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLL-ALSYPVLKSTCPAQFKLLSPEHNWARFSRFR 716 (1527)
Q Consensus 638 ~~~~~~R~i~k~G~~ni~~~~~~~~~~~~~~Dif~tlv~~~Wr~~~l~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1527)
.++.++|.+.|||+|||.+.+ .+.+++.|+|+++++.+|++++++ +++|
T Consensus 22 ~~~~~~~~~~~~G~~nv~~~~---~~~~~~~d~~~~~l~~~~~~ll~~~~~~~--------------------------- 71 (333)
T 1p7b_A 22 RKPPRGGRRIWSGTREVIAYG---MPASVWRDLYYWALKVSWPVFFASLAALF--------------------------- 71 (333)
T ss_dssp --------------CCSSCEE---CCCCHHHHHHHHHHHSCHHHHHHHHHHHH---------------------------
T ss_pred ccccceeeEecCCceEEEEcc---ccchHHHHHHHHHHHhhHHHHHHHHHHHH---------------------------
Confidence 345567778899999997543 355799999999999999999988 7888
Q ss_pred hhhhhccccccccccCCCcccccccccCCCCCCCCCCcccceEeechhhhhcccCceeeehhhHHHHhhhcCCccccCCC
Q psy4010 717 LHLVAASVHTSNQVAKHPNVHISRALGCSSPMSLRPGKIENRYGSFSEQLALSYPVLKSFACIWWLLAYTHGDVLSENQN 796 (1527)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~l~~~villFAlIYylIa~~hGDl~~~~~~ 796 (1527)
++.| ++||++||+.+ +...
T Consensus 72 ------------------------------------------l~~~-----------l~fally~~e~----~~~~---- 90 (333)
T 1p7b_A 72 ------------------------------------------VVNN-----------TLFALLYQLGD----APIA---- 90 (333)
T ss_dssp ------------------------------------------HHHH-----------HHHHTTTSSSS----SCCC----
T ss_pred ------------------------------------------HHHH-----------HHHHHHHHHhc----cccc----
Confidence 7778 99999998752 2110
Q ss_pred CCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccceeee
Q psy4010 797 NPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQRTQTLLF 876 (1527)
Q Consensus 797 ~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkRA~TIlF 876 (1527)
-....+|.+|||||++|+||||||+++|.+ +.+.+++++++++|+++.|+++|++++++++|++| +.|
T Consensus 91 -------~~~~~s~~~a~yfs~vT~tTVGYGDi~P~t--~~gr~~~~~~~l~G~~~~a~~ig~i~~~~~~~~~r---~~f 158 (333)
T 1p7b_A 91 -------NQSPPGFVGAFFFSVETLATVGYGDMHPQT--VYAHAIATLEIFVGMSGIALSTGLVFARFARPRAK---IMF 158 (333)
T ss_dssp -------CSSSSSTHHHHHHHTTTTTTCCCSCCCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCC---CEE
T ss_pred -------CCCCCcHHHhHhhhheeeeecCCCCCcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh
Confidence 012468999999999999999999998754 78999999999999999999999999999999998 899
Q ss_pred ccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCceeeecceEEEEecC
Q psy4010 877 SRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSDIFLLWPTIVVHRID 956 (1527)
Q Consensus 877 Sk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~~fL~lPwTVvHvID 956 (1527)
|++||||++||++|||||++|+| +++|++++||+++++.++|+|||.++++ ++|+|++++ .++|.+||||+|+||
T Consensus 159 s~~~VI~~~~g~~~L~fRv~n~r-~~~li~a~vr~~li~~~~t~eGe~~~~~-~~l~l~~~~---~~~l~~~~tv~H~Id 233 (333)
T 1p7b_A 159 ARHAIVRPFNGRMTLMVRAANAR-QNVIAEARAKMRLMRREHSSEGYSLMKI-HDLKLVRNE---HPIFLLGWNMMHVID 233 (333)
T ss_dssp CSCEEEEECSSSEEEEEEEECCS-SCCCCEEEEEEECC----------CCEE-CCSGGGTTC---SCCCCSSEEEEEECS
T ss_pred CCCEEEcCCCCcceEEEEecccc-cceEEeeEEEEEEEeeeecCCCcEEeee-eecccccCC---CeeEeeeEEEEEeCC
Confidence 99999999999999999999999 9999999999999999999999998874 899998765 488999999999999
Q ss_pred CCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc--ceeeeeeecccccCccc
Q psy4010 957 EESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK--QLVTSSIHMFVPNGLSK 1034 (1527)
Q Consensus 957 E~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k--~iD~~~Fh~v~P~~l~~ 1034 (1527)
|+||||++++++|.++++||+|+|+|+||+|||++|||+||.++||+|||||+||++.+++ .+|+++||+++|....+
T Consensus 234 ~~SPL~~~s~~~L~~~~~eivV~l~G~de~t~~t~qar~sY~~~eI~wg~rF~~i~~~~~g~~~vD~~~f~~~~~~~~~~ 313 (333)
T 1p7b_A 234 ESSPLFGETPESLAEGRAMLLVMIEGSDETTAQVMQARHAWEHDDIRWHHRYVDLMSDVDGMTHIDYTRFNDTEPVEPPG 313 (333)
T ss_dssp TTSTTSSCCHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEEGGGEEETCCBCCCC------CCCCCTTSSCBCCC----
T ss_pred CCCCccccCHhHHhcCCEEEEEEEEEEecccCceEEEEEEechHHeeeCCEechheEeCCCcEEEEhHHcCCceecCCcc
Confidence 9999999999999999999999999999999999999999999999999999999986633 49999999999988755
Q ss_pred c
Q psy4010 1035 E 1035 (1527)
Q Consensus 1035 ~ 1035 (1527)
+
T Consensus 314 ~ 314 (333)
T 1p7b_A 314 A 314 (333)
T ss_dssp -
T ss_pred c
Confidence 5
No 11
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*
Probab=100.00 E-value=3.5e-59 Score=527.84 Aligned_cols=289 Identities=23% Similarity=0.362 Sum_probs=217.2
Q ss_pred ccccccceeccCCceeeEeccchhhhhhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcc
Q psy4010 100 YRKLKKRAIDKNGTGNIIQINISKRRRAFLQDIFTTLVDIQWRWTMLVCSMGFLLSWIVSYDTYQTLLDTHSLVADIVCF 179 (1527)
Q Consensus 100 ~r~~r~R~V~K~G~cNV~~~nv~~~~~ryl~DiFTTLVDlrWRw~LliF~~sFl~SWlvFa~iyw~La~~H~llaDIv~f 179 (1527)
+++.|+|.+.|||+|||..... +.+|+.|+|+++++.+||+.+++|++.|+++|++|+++||+. .|
T Consensus 22 ~~~~~~~~~~~~G~~nv~~~~~---~~~~~~d~~~~~l~~~~~~ll~~~~~~~l~~~l~fally~~e-------~~---- 87 (333)
T 1p7b_A 22 RKPPRGGRRIWSGTREVIAYGM---PASVWRDLYYWALKVSWPVFFASLAALFVVNNTLFALLYQLG-------DA---- 87 (333)
T ss_dssp --------------CCSSCEEC---CCCHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTTTSSS-------SS----
T ss_pred ccccceeeEecCCceEEEEccc---cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------cc----
Confidence 4566777777999999964432 457999999999999999999999999999999999999831 00
Q ss_pred ccCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeeccccccccccccCCCCccceeeeeeeeE
Q psy4010 180 KTPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFKALTEDIAVPGRDVGSISIFNGQFF 259 (1527)
Q Consensus 180 ~~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~Al~e~i~f~~~~~g~~s~f~gaFl 259 (1527)
|..+. ...|| ..+|.
T Consensus 88 -------------------------------~~~~~--------------~~~s~--------------------~~a~y 102 (333)
T 1p7b_A 88 -------------------------------PIANQ--------------SPPGF--------------------VGAFF 102 (333)
T ss_dssp -------------------------------CCCCS--------------SSSST--------------------HHHHH
T ss_pred -------------------------------cccCC--------------CCCcH--------------------HHhHh
Confidence 11100 00122 34677
Q ss_pred EEeeeeeeeeeeeccccccccccccccccccccceeeeeccccchhhh-hhhhhhhhhHHHHHHHHHHHHHhhhcCCCCC
Q psy4010 260 LRGLTEGTVTAKVLSSRNRREKEDRIGSDEIPVCGVQYVGDYCTLCHR-HGKQANLNDLSRLQAFMTGLVFAKVARPKQR 338 (1527)
Q Consensus 260 fs~eTqtTig~~~~~~~~~~Etq~tigteecp~yG~r~vt~~C~~~i~-l~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkR 338 (1527)
|+++|.||+| ||-. +..|+.+.+ .++|+++| +++.|+++|+++++|++|++|
T Consensus 103 fs~vT~tTVG-----------------------YGDi--~P~t~~gr~~~~~~~l~G--~~~~a~~ig~i~~~~~~~~~r 155 (333)
T 1p7b_A 103 FSVETLATVG-----------------------YGDM--HPQTVYAHAIATLEIFVG--MSGIALSTGLVFARFARPRAK 155 (333)
T ss_dssp HHTTTTTTCC-----------------------CSCC--CCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTSCCCC
T ss_pred hhheeeeecC-----------------------CCCC--cCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776 3432 234565655 45888887 889999999999999999999
Q ss_pred CCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhhhhcccccccccc
Q psy4010 339 TQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDAVLQSTEFSSTTS 418 (1527)
Q Consensus 339 a~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~~~q~~e~~~~ts 418 (1527)
+.||++||||++||++|||||++|+| +++|++++||+++++.++|+|||.++++ ++|++.
T Consensus 156 ---~~fs~~~VI~~~~g~~~L~fRv~n~r-~~~li~a~vr~~li~~~~t~eGe~~~~~-~~l~l~--------------- 215 (333)
T 1p7b_A 156 ---IMFARHAIVRPFNGRMTLMVRAANAR-QNVIAEARAKMRLMRREHSSEGYSLMKI-HDLKLV--------------- 215 (333)
T ss_dssp ---CEECSCEEEEECSSSEEEEEEEECCS-SCCCCEEEEEEECC----------CCEE-CCSGGG---------------
T ss_pred ---HHhCCCEEEcCCCCcceEEEEecccc-cceEEeeEEEEEEEeeeecCCCcEEeee-eecccc---------------
Confidence 99999999999999999999999999 6899999999999999999999998764 344431
Q ss_pred cccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceEEEeeecCCCccc
Q psy4010 419 TYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEIL 498 (1527)
Q Consensus 419 ~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTvQARTSYlp~EIL 498 (1527)
| ++.++|.+|+||+|+|||+||||++++++|.+++|||+|+|||+||+|||++||||||+++||+
T Consensus 216 ---~------------~~~~~l~~~~tv~H~Id~~SPL~~~s~~~L~~~~~eivV~l~G~de~t~~t~qar~sY~~~eI~ 280 (333)
T 1p7b_A 216 ---R------------NEHPIFLLGWNMMHVIDESSPLFGETPESLAEGRAMLLVMIEGSDETTAQVMQARHAWEHDDIR 280 (333)
T ss_dssp ---T------------TCSCCCCSSEEEEEECSTTSTTSSCCHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEEGGGEE
T ss_pred ---c------------CCCeeEeeeEEEEEeCCCCCCccccCHhHHhcCCEEEEEEEEEEecccCceEEEEEEechHHee
Confidence 1 2346888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeccceecCCCcccccccccccchhhhh
Q psy4010 499 WGHRFEPLVRKDKPCDKPHFKSYDDLINEAL 529 (1527)
Q Consensus 499 WGhRF~piV~~dkg~y~IDfskFd~viP~~l 529 (1527)
|||||+||++.++|.|+|||++||+++|...
T Consensus 281 wg~rF~~i~~~~~g~~~vD~~~f~~~~~~~~ 311 (333)
T 1p7b_A 281 WHHRYVDLMSDVDGMTHIDYTRFNDTEPVEP 311 (333)
T ss_dssp ETCCBCCCC------CCCCCTTSSCBCCC--
T ss_pred eCCEechheEeCCCcEEEEhHHcCCceecCC
Confidence 9999999999888999999999999999874
No 12
>2gix_A Inward rectifier potassium channel 2; cytoplasmic domains of KIR2.1, andersen'S mutation, metal transport; 2.02A {Mus musculus}
Probab=100.00 E-value=2.4e-54 Score=461.47 Aligned_cols=183 Identities=40% Similarity=0.683 Sum_probs=169.3
Q ss_pred HHHhhhcCCCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhh
Q psy4010 327 LVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDA 406 (1527)
Q Consensus 327 LVFAKfSRPkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~ 406 (1527)
++|||||||+|||+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.++..+.+|+|
T Consensus 15 ~vfakisrP~kRa~tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~r~~~t~EGe~~~~~~~~L~l---- 89 (208)
T 2gix_A 15 CNVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLQ-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINV---- 89 (208)
T ss_dssp BCEEEECCCCSCSCSEEECSCEEEEEETTEEEEEEEEEECC-SSCEEEEEEEEEEEEEEECTTCCEEEEEEEEECS----
T ss_pred EEEEEecCCcccCCcEEecCeEEEEEeCCEEEEEEEEecCc-cCeEEeeEEEEEEEEEEeCCCCcEEEEEEEEEEe----
Confidence 47999999999999999999999999999999999999999 7999999999999999999999998644434432
Q ss_pred hhcccccccccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceE
Q psy4010 407 VLQSTEFSSTTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTT 486 (1527)
Q Consensus 407 ~~q~~e~~~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTv 486 (1527)
..|.+++.+||.||+||+|+|||+||||++++++|.+++|||||+|+|+||+|||++
T Consensus 90 -----------------------~~d~~~~~~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~dest~qt~ 146 (208)
T 2gix_A 90 -----------------------GFDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTK 146 (208)
T ss_dssp -----------------------SGGGTTTEECCSSCEEEEEECCTTSTTTTCCHHHHHTCCCEEEEEEEEEETTTCCEE
T ss_pred -----------------------ccCCCCCceEEeccEEEEEECCCCCCccccChhHHhcCCEEEEEEEEEEecccCcEE
Confidence 223456789999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhc
Q psy4010 487 QAKTSYLPSEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKS 539 (1527)
Q Consensus 487 QARTSYlp~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~ 539 (1527)
||||||+++||+|||||+||+..++|.|.|||++||++.|.+ ++|.|+||+
T Consensus 147 qaR~SY~~~eIlWg~rF~~iv~~~~g~~~VD~s~F~~~~~v~--~tp~csa~~ 197 (208)
T 2gix_A 147 QCRSSYLANEILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVP--NTPLCSARD 197 (208)
T ss_dssp EEEEEEEGGGEEETEEECCCEEECSSSEEEEGGGTTCEEECT--TSCCSCHHH
T ss_pred EEEEEEchHHEEeCCEeceeEEcCCCeEEEEhHHcCcceEcC--CCCCCCHHH
Confidence 999999999999999999999988899999999999999987 489999993
No 13
>1u4f_A Inward rectifier potassium channel 2; cytoplasmic domain, KIR2.1, IRK1, inwardly rectifying K channel, rectification, allergen; 2.41A {Mus musculus}
Probab=100.00 E-value=8.1e-53 Score=462.92 Aligned_cols=190 Identities=41% Similarity=0.668 Sum_probs=172.2
Q ss_pred HHHhhhcCCCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHhh
Q psy4010 327 LVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILDA 406 (1527)
Q Consensus 327 LVFAKfSRPkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld~ 406 (1527)
+||||||||++||+||+||++|||+++||++||||||||+| +++||+|+||++|++.++|+|||.++..+.+|++
T Consensus 20 ~vFaKiSrPkkRa~tI~FS~~AVI~~rdG~~~LMfRVaN~R-~s~Iiea~Vrl~Lir~~~T~EGe~~~~~~~dL~l---- 94 (270)
T 1u4f_A 20 CNVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLR-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINV---- 94 (270)
T ss_dssp BCEEEESCCCTTTCSEEECSSEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEEEEEECTTCCEEEEEEEECCS----
T ss_pred EEEEEccCCcCCCceEEecCcEEEEEeCCEEEEEEEEecCC-CCeEEeeEEEEEEEEEEEcCCCcEEEeEEEEEEe----
Confidence 57999999999999999999999999999999999999999 7999999999999999999999998644333332
Q ss_pred hhcccccccccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccceE
Q psy4010 407 VLQSTEFSSTTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTT 486 (1527)
Q Consensus 407 ~~q~~e~~~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqTv 486 (1527)
..|.+++.+||.||+||+|+||++||||++++++|.+.+|||||+|+|+||+|||++
T Consensus 95 -----------------------~~d~~~~~~fL~~P~tV~H~IDe~SPLy~~t~e~L~~~d~EIvV~LeG~dEsTgqtv 151 (270)
T 1u4f_A 95 -----------------------GFDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTT 151 (270)
T ss_dssp -----------------------STTTTTTEECCSSCEEEEEECCTTSTTTTCCHHHHHHCCCEEEEEEEEEETTCSCEE
T ss_pred -----------------------ccCCCCCceEEeccEEEEEECCCCCCccccChhhHhcCCeEEEEEEEEEecccCcEE
Confidence 224456789999999999999999999999999999999999999999999999999
Q ss_pred EEeeecCCCccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhhh
Q psy4010 487 QAKTSYLPSEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRHK 552 (1527)
Q Consensus 487 QARTSYlp~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~~ 552 (1527)
||||||+++||+|||||+||+..++|.|.|||++||+++|.+ ++|.|+|| .|++.+..
T Consensus 152 qARtSY~~~EIlWghRF~~iv~~~~G~y~VD~s~Fh~t~pv~--~tP~csa~------~l~e~~~~ 209 (270)
T 1u4f_A 152 QCRSSYLANEILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVP--NTPLCSAR------DLAEKKYI 209 (270)
T ss_dssp EEEEEEEGGGEEETEEECCCEEECSSSEEEEGGGSSCEEECT--TSCCSCHH------HHHHHC--
T ss_pred EEEEEEchHHEEeCCEeceeEEcCCCeEEEEhHHcCcceecC--CCCCCCHH------HHhhhhcc
Confidence 999999999999999999999988899999999999999987 48999999 55554443
No 14
>3agw_A KIR3.2, G protein-activated inward rectifier potassium CH; cytoplasmic assembly, ION channel, beta-barrel, transport PR; 2.20A {Mus musculus} PDB: 3at8_A 3at9_A 3ata_A 3atb_A 3atd_A 3ate_A 3atf_A 2e4f_A 3auw_B 3auw_A
Probab=100.00 E-value=1.5e-51 Score=440.03 Aligned_cols=187 Identities=39% Similarity=0.679 Sum_probs=166.7
Q ss_pred HHHHhhhcCCCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHHh
Q psy4010 326 GLVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVILD 405 (1527)
Q Consensus 326 GLVFAKfSRPkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~ld 405 (1527)
|++|| ++|++||+||+||++|||+++||++||||||||+| +++|++|+||++|++.++|+|||.++.++++|+|
T Consensus 18 ~~v~~--~~pk~Ra~tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~~~~~t~EGe~~~~~~~dL~l--- 91 (208)
T 3agw_A 18 NVHHG--NVREKRAETLVFSTHAVISMRDGKLCLMFRVGDLR-NSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINV--- 91 (208)
T ss_dssp CBSTT--CCC---CCCCCBCSCEEEEEETTEEEEEEEECCCT-TCCEEEEEEEEEEECCEECTTCCEETTCEEECCS---
T ss_pred eEEEe--ccCCcccccEEecceEEEEecCCeEEEEEEEecCc-cCeEEeeEEEEEEEEEEECCCCcEEEEEEEeeec---
Confidence 44444 56888999999999999999999999999999999 6899999999999999999999998766544442
Q ss_pred hhhcccccccccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccce
Q psy4010 406 AVLQSTEFSSTTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQT 485 (1527)
Q Consensus 406 ~~~q~~e~~~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGqT 485 (1527)
..|..++.+||.||+||+|+|||+||||++++++|.+++|||||+|+|+||+|||+
T Consensus 92 ------------------------~~d~~~~~~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~dest~~t 147 (208)
T 3agw_A 92 ------------------------GYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMT 147 (208)
T ss_dssp ------------------------STTTTTTBCCCSSCEEEEEECCTTSTTTTCCTTTGGGCCCEEEEEEEEEETTTCSE
T ss_pred ------------------------ccCCCCCceEEeccEEEEEECCCCCCccccCHhHHhcCCeEEEEEEEEEehhhCcE
Confidence 23455678999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCCCccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhh
Q psy4010 486 TQAKTSYLPSEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRH 551 (1527)
Q Consensus 486 vQARTSYlp~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~ 551 (1527)
+||||||+++||+|||||+||+..++|.|.|||++||++.|.. +|.|+|+ .|++.++
T Consensus 148 ~qaR~SY~~~eIlWg~rF~~iv~~~~G~~~VD~s~F~~~~pv~---~p~~sa~------~l~~~~~ 204 (208)
T 3agw_A 148 CQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETS---TPSLSAK------ELAELAN 204 (208)
T ss_dssp EEEEEEEEGGGEEETEEECCCEEEETTEEEECGGGTTCEEECC---CCCSCHH------HHHHHHT
T ss_pred EEEEEEEChHHEEeCCEeeeeEEecCCeEEEEhHHcCcceecC---CCcCCHH------HHHHHHh
Confidence 9999999999999999999999988899999999999999987 7999998 5666543
No 15
>1n9p_A GIRK1, G protein-activated inward rectifier potassium CH; beta barrel, cytoplasmic domain, inward rectifier potassium channel, metal transport; 1.80A {Mus musculus} SCOP: b.1.18.16 PDB: 3k6n_A 1u4e_A
Probab=100.00 E-value=7.2e-52 Score=442.10 Aligned_cols=190 Identities=36% Similarity=0.609 Sum_probs=166.8
Q ss_pred HHHHHhhhcCCCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHHHH
Q psy4010 325 TGLVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKVIL 404 (1527)
Q Consensus 325 tGLVFAKfSRPkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL~l 404 (1527)
+|++|+||+||+ |+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.++.++.+|+
T Consensus 15 ~~v~~~rfsk~R--a~tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~r~~~t~EGe~~~~~~~~L~--- 88 (207)
T 1n9p_A 15 CNVQHGNLGSER--AETLMFSEHAVISMRDGKLTLMFRVGNLR-NSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELD--- 88 (207)
T ss_dssp BCEEC-----CC--SCCSSBCSCEEEEEETTEEEEEEEECCCS-SSCEEEEEEEEEEEEEEECTTSCEEEEEEEECC---
T ss_pred eeeEEeeecCCc--cceEEEeCcEEEEEECCEEEEEEEEecCC-CCeEEccEEEEEEEEEEEcCCCcEEEEEEEeeE---
Confidence 678899998865 45899999999999999999999999999 799999999999999999999999874433332
Q ss_pred hhhhcccccccccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccccc
Q psy4010 405 DAVLQSTEFSSTTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQ 484 (1527)
Q Consensus 405 d~~~q~~e~~~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DESTGq 484 (1527)
+..|..++.+||.||+||+|+||++||||++++++|.+++|||||+|+|+||+|||
T Consensus 89 ------------------------l~~d~~~~~~~l~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~ 144 (207)
T 1n9p_A 89 ------------------------VGFSTGADQLFLVSPLTICHVIDAKSPFYDLSQRSMQTEQFEVVVILEGIVETTGM 144 (207)
T ss_dssp ------------------------SSTTTTTTEEECSSCEEEEEECCTTSTTTTCCTTGGGTCCCEEEEEEEEEETTTCC
T ss_pred ------------------------eeccCCCCceEEEccEEEEEeCCCCCCccccCHhHHhcCCeEEEEEEEEEehhhCc
Confidence 23345567899999999999999999999999999999999999999999999999
Q ss_pred eEEEeeecCCCccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhhhc
Q psy4010 485 TTQAKTSYLPSEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRHKR 553 (1527)
Q Consensus 485 TvQARTSYlp~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~~~ 553 (1527)
++||||||+++||+|||||+||+..++|.|.|||++||+++|.. +|.|+|| .|++.+..+
T Consensus 145 t~qaR~SY~~~eIlWg~rF~~iv~~~~~~~~VD~s~F~~~~~v~---~p~~sa~------~l~e~~~~~ 204 (207)
T 1n9p_A 145 TCQARTSYTEDEVLWGHRFFPVISLEEGFFKVDYSQFHATFEVP---TPPYSVK------EQEEMLLMS 204 (207)
T ss_dssp BCCEEEEEEGGGEEETEEECCCEEESSSCEEECGGGSSCEEECC---CCCSCHH------HHHHHHHHH
T ss_pred EEEEEEEEChHHeeeCCEeeeeEEEcCCeEEEEHHHhCCceEcC---CCccCHH------HHhhhhccC
Confidence 99999999999999999999999988878999999999999987 7999999 677766544
No 16
>2gix_A Inward rectifier potassium channel 2; cytoplasmic domains of KIR2.1, andersen'S mutation, metal transport; 2.02A {Mus musculus}
Probab=100.00 E-value=5.7e-50 Score=427.77 Aligned_cols=178 Identities=40% Similarity=0.669 Sum_probs=168.1
Q ss_pred HHHHHHcCcccccceeeeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecc
Q psy4010 859 LVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQ 938 (1527)
Q Consensus 859 lVFAKfSRPkkRA~TIlFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~ 938 (1527)
++|||||||++||+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.++.++.+|+|++|.
T Consensus 15 ~vfakisrP~kRa~tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~r~~~t~EGe~~~~~~~~L~l~~d~ 93 (208)
T 2gix_A 15 CNVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLQ-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINVGFDS 93 (208)
T ss_dssp BCEEEECCCCSCSCSEEECSCEEEEEETTEEEEEEEEEECC-SSCEEEEEEEEEEEEEEECTTCCEEEEEEEEECSSGGG
T ss_pred EEEEEecCCcccCCcEEecCeEEEEEeCCEEEEEEEEecCc-cCeEEeeEEEEEEEEEEeCCCCcEEEEEEEEEEeccCC
Confidence 36899999999999999999999999999999999999999 99999999999999999999999998888999999988
Q ss_pred cCCceeeecceEEEEecCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc-
Q psy4010 939 YDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK- 1017 (1527)
Q Consensus 939 ~~~~~fL~lPwTVvHvIDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k- 1017 (1527)
+++++||.+||||+|+|||+||||++++++|.+.++||+|+|+|+||+|||++|||+||.++||+|||||+||+..+++
T Consensus 94 ~~~~~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~dest~qt~qaR~SY~~~eIlWg~rF~~iv~~~~g~ 173 (208)
T 2gix_A 94 GIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTKQCRSSYLANEILWGHRYEPVLFEEKHY 173 (208)
T ss_dssp TTTEECCSSCEEEEEECCTTSTTTTCCHHHHHTCCCEEEEEEEEEETTTCCEEEEEEEEEGGGEEETEEECCCEEECSSS
T ss_pred CCCceEEeccEEEEEECCCCCCccccChhHHhcCCEEEEEEEEEEecccCcEEEEEEEEchHHEEeCCEeceeEEcCCCe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999975433
Q ss_pred -ceeeeeeecccccCcccccc
Q psy4010 1018 -QLVTSSIHMFVPNGLSKECK 1037 (1527)
Q Consensus 1018 -~iD~~~Fh~v~P~~l~~~c~ 1037 (1527)
.+|+++||+++|.+-...|+
T Consensus 174 ~~VD~s~F~~~~~v~~tp~cs 194 (208)
T 2gix_A 174 YKVDYSRFHKTYEVPNTPLCS 194 (208)
T ss_dssp EEEEGGGTTCEEECTTSCCSC
T ss_pred EEEEhHHcCcceEcCCCCCCC
Confidence 49999999999986445665
No 17
>2xky_I Inward rectifier potassium channel 2; ION channel, metal transport, membrane protein; 17.20A {Mus musculus}
Probab=100.00 E-value=5.3e-49 Score=438.69 Aligned_cols=190 Identities=42% Similarity=0.691 Sum_probs=170.6
Q ss_pred HHHHhhhcC---CCCCCCeeeeccceEEeecCCeEEEEEEEeeCCCCceeeecEEEEEEEEeeecCCCcccccchhhHHH
Q psy4010 326 GLVFAKVAR---PKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKV 402 (1527)
Q Consensus 326 GLVFAKfSR---PkkRa~TI~FSk~AVIs~rDGklcLMFRVgNlR~ks~LIea~VRa~Lir~~~T~EGE~i~~~~~eLkL 402 (1527)
|+.|+++++ +++||+||+||++|||+++||++||||||||+| +++||+|+||++|++.++|+|||.++..+++|++
T Consensus 55 nV~f~~~~~k~qrr~RA~TI~FS~~AVI~~rDG~~cLMFRVaN~R-~s~Iiea~Vr~~Lir~~~T~EGe~i~~~~~dL~l 133 (309)
T 2xky_I 55 NVQFINVGEKGQRGGRNETLVFSHNAVIAMRDGKLCLMWRVGNLR-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINV 133 (309)
T ss_pred eeEEeecCcccccCCCcceEEEeccEEEEEECCEEEEEEEEecCc-CCeEEccEEEEEEEEEEEcCCCcEEEeeeeeeec
Confidence 345666665 489999999999999999999999999999999 7999999999999999999999998765555554
Q ss_pred HHhhhhcccccccccccccccCCcccccccccCCceeeecceEEEEecCCCCcCcccCHhhhccCCEEEEEEEEEeeccc
Q psy4010 403 ILDAVLQSTEFSSTTSTYVRAGTPYQLHIDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTEST 482 (1527)
Q Consensus 403 ~ld~~~q~~e~~~~ts~~vR~gtp~~L~ld~~~~~lfLiwPlTVvH~IDe~SPLY~~T~edL~~~dfEIVViLEG~DEST 482 (1527)
. .|.+.+++||.||+||+|+||++||||++++++|.+++|||||+|+|+||+|
T Consensus 134 ~---------------------------~d~~~~~~fL~~P~tV~H~IDe~SPLy~~t~e~L~~~dfEIVV~LeG~dEsT 186 (309)
T 2xky_I 134 G---------------------------FDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEAT 186 (309)
T ss_pred c---------------------------cCCCCcceeEeccEEEEEECCCCCCccccChhhHhcCCeEEEEEEEEEeccc
Confidence 2 2334567999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeecCCCccccCCeeccceecCCCcccccccccccchhhhhhchhhhhhhccccchHHHHhhh
Q psy4010 483 GQTTQAKTSYLPSEILWGHRFEPLVRKDKPCDKPHFKSYDDLINEALLESNIQHAKSKSENTLLAQYRH 551 (1527)
Q Consensus 483 GqTvQARTSYlp~EILWGhRF~piV~~dkg~y~IDfskFd~viP~~l~~~~~~~A~~~~~~~~~~~~~~ 551 (1527)
||++||||||+++||+|||||+||+..++|.|.|||++||+++|.. ++|.|+|| .|++.+.
T Consensus 187 gqtvqARtSY~~~EIlWGhRF~piv~~~~G~y~VD~s~Fh~t~pv~--~tP~cSa~------~l~e~~~ 247 (309)
T 2xky_I 187 AMTTQCRSSYLANEILWGHRYEPVLFEEKHYYKVDYSRFHKTYEVP--NTPLCSAR------DLAEKKY 247 (309)
T ss_pred CceEEEEEEEchHHeeeCCEeceeEEcCCCeEEEEhHHcCcceecC--CCCCCCHH------HHhhhhc
Confidence 9999999999999999999999999988899999999999999987 48999999 5665544
No 18
>1u4f_A Inward rectifier potassium channel 2; cytoplasmic domain, KIR2.1, IRK1, inwardly rectifying K channel, rectification, allergen; 2.41A {Mus musculus}
Probab=100.00 E-value=1.5e-48 Score=429.18 Aligned_cols=178 Identities=42% Similarity=0.680 Sum_probs=168.4
Q ss_pred HHHHHHcCcccccceeeeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecc
Q psy4010 859 LVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQ 938 (1527)
Q Consensus 859 lVFAKfSRPkkRA~TIlFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~ 938 (1527)
+||||||||++||+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+||+.+++++.+|++++|.
T Consensus 20 ~vFaKiSrPkkRa~tI~FS~~AVI~~rdG~~~LMfRVaN~R-~s~Iiea~Vrl~Lir~~~T~EGe~~~~~~~dL~l~~d~ 98 (270)
T 1u4f_A 20 CNVQFINVGEKRNETLVFSHNAVIAMRDGKLCLMWRVGNLR-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINVGFDS 98 (270)
T ss_dssp BCEEEESCCCTTTCSEEECSSEEEEEETTEEEEEEEEEECS-SSCEEEEEEEEEEEEEEECTTCCEEEEEEEECCSSTTT
T ss_pred EEEEEccCCcCCCceEEecCcEEEEEeCCEEEEEEEEecCC-CCeEEeeEEEEEEEEEEEcCCCcEEEeEEEEEEeccCC
Confidence 46899999999999999999999999999999999999999 99999999999999999999999998888999999988
Q ss_pred cCCceeeecceEEEEecCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc-
Q psy4010 939 YDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK- 1017 (1527)
Q Consensus 939 ~~~~~fL~lPwTVvHvIDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k- 1017 (1527)
+++++||.+||||+|+||++||||++++++|.+.++||||+|+|+||+|||++|||+||.++||+|||||+||+..+++
T Consensus 99 ~~~~~fL~~P~tV~H~IDe~SPLy~~t~e~L~~~d~EIvV~LeG~dEsTgqtvqARtSY~~~EIlWghRF~~iv~~~~G~ 178 (270)
T 1u4f_A 99 GIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTTQCRSSYLANEILWGHRYEPVLFEEKHY 178 (270)
T ss_dssp TTTEECCSSCEEEEEECCTTSTTTTCCHHHHHHCCCEEEEEEEEEETTCSCEEEEEEEEEGGGEEETEEECCCEEECSSS
T ss_pred CCCceEEeccEEEEEECCCCCCccccChhhHhcCCeEEEEEEEEEecccCcEEEEEEEEchHHEEeCCEeceeEEcCCCe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999985433
Q ss_pred -ceeeeeeecccccCcccccc
Q psy4010 1018 -QLVTSSIHMFVPNGLSKECK 1037 (1527)
Q Consensus 1018 -~iD~~~Fh~v~P~~l~~~c~ 1037 (1527)
.+|+++||+++|.+-...|+
T Consensus 179 y~VD~s~Fh~t~pv~~tP~cs 199 (270)
T 1u4f_A 179 YKVDYSRFHKTYEVPNTPLCS 199 (270)
T ss_dssp EEEEGGGSSCEEECTTSCCSC
T ss_pred EEEEhHHcCcceecCCCCCCC
Confidence 49999999999986445666
No 19
>1n9p_A GIRK1, G protein-activated inward rectifier potassium CH; beta barrel, cytoplasmic domain, inward rectifier potassium channel, metal transport; 1.80A {Mus musculus} SCOP: b.1.18.16 PDB: 3k6n_A 1u4e_A
Probab=100.00 E-value=8.8e-48 Score=410.68 Aligned_cols=172 Identities=40% Similarity=0.665 Sum_probs=158.4
Q ss_pred HHHHHHHcCcccccceeeeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeec
Q psy4010 858 GLVFAKVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHID 937 (1527)
Q Consensus 858 GlVFAKfSRPkkRA~TIlFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd 937 (1527)
|++|+||+||+++ ||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.++.++.+|+|+.|
T Consensus 16 ~v~~~rfsk~Ra~--tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~r~~~t~EGe~~~~~~~~L~l~~d 92 (207)
T 1n9p_A 16 NVQHGNLGSERAE--TLMFSEHAVISMRDGKLTLMFRVGNLR-NSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELDVGFS 92 (207)
T ss_dssp CEEC-----CCSC--CSSBCSCEEEEEETTEEEEEEEECCCS-SSCEEEEEEEEEEEEEEECTTSCEEEEEEEECCSSTT
T ss_pred eeEEeeecCCccc--eEEEeCcEEEEEECCEEEEEEEEecCC-CCeEEccEEEEEEEEEEEcCCCcEEEEEEEeeEeecc
Confidence 7789999987754 899999999999999999999999999 9999999999999999999999999988899999888
Q ss_pred ccCCceeeecceEEEEecCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc
Q psy4010 938 QYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK 1017 (1527)
Q Consensus 938 ~~~~~~fL~lPwTVvHvIDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k 1017 (1527)
..++.+||.+||||+|+|||+||||++++++|.+.++||+|+|+|+||+|||++|||+||.++||+|||||+||++.+++
T Consensus 93 ~~~~~~~l~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~de~t~~t~qaR~SY~~~eIlWg~rF~~iv~~~~~ 172 (207)
T 1n9p_A 93 TGADQLFLVSPLTICHVIDAKSPFYDLSQRSMQTEQFEVVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLEEG 172 (207)
T ss_dssp TTTTEEECSSCEEEEEECCTTSTTTTCCTTGGGTCCCEEEEEEEEEETTTCCBCCEEEEEEGGGEEETEEECCCEEESSS
T ss_pred CCCCceEEEccEEEEEeCCCCCCccccCHhHHhcCCeEEEEEEEEEehhhCcEEEEEEEEChHHeeeCCEeeeeEEEcCC
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred --ceeeeeeecccccCc
Q psy4010 1018 --QLVTSSIHMFVPNGL 1032 (1527)
Q Consensus 1018 --~iD~~~Fh~v~P~~l 1032 (1527)
.+|+++||+++|...
T Consensus 173 ~~~VD~s~F~~~~~v~~ 189 (207)
T 1n9p_A 173 FFKVDYSQFHATFEVPT 189 (207)
T ss_dssp CEEECGGGSSCEEECCC
T ss_pred eEEEEHHHhCCceEcCC
Confidence 499999999998764
No 20
>3agw_A KIR3.2, G protein-activated inward rectifier potassium CH; cytoplasmic assembly, ION channel, beta-barrel, transport PR; 2.20A {Mus musculus} PDB: 3at8_A 3at9_A 3ata_A 3atb_A 3atd_A 3ate_A 3atf_A 2e4f_A 3auw_B 3auw_A
Probab=100.00 E-value=4.1e-47 Score=405.76 Aligned_cols=173 Identities=40% Similarity=0.678 Sum_probs=159.0
Q ss_pred HHcCcccccceeeeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeeeecccCCc
Q psy4010 863 KVARPKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLHIDQYDSD 942 (1527)
Q Consensus 863 KfSRPkkRA~TIlFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~rd~~~~~ 942 (1527)
+.++|++||+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+|||.+++.+++|+|..|..+++
T Consensus 21 ~~~~pk~Ra~tI~FS~~AVI~~~dG~~~LmfRv~n~R-~~~iiea~vr~~L~~~~~t~EGe~~~~~~~dL~l~~d~~~~~ 99 (208)
T 3agw_A 21 HGNVREKRAETLVFSTHAVISMRDGKLCLMFRVGDLR-NSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDR 99 (208)
T ss_dssp TTCCC---CCCCCBCSCEEEEEETTEEEEEEEECCCT-TCCEEEEEEEEEEECCEECTTCCEETTCEEECCSSTTTTTTB
T ss_pred EeccCCcccccEEecceEEEEecCCeEEEEEEEecCc-cCeEEeeEEEEEEEEEEECCCCcEEEEEEEeeecccCCCCCc
Confidence 4567888889999999999999999999999999999 999999999999999999999999998889999988887889
Q ss_pred eeeecceEEEEecCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecccc--cee
Q psy4010 943 IFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSVSK--QLV 1020 (1527)
Q Consensus 943 ~fL~lPwTVvHvIDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d~k--~iD 1020 (1527)
+||.|||||+|+|||+||||++|+++|.+.++||+|+|+|+||+|||++|||+||.++||+|||||+||++..+. .+|
T Consensus 100 ~fl~~p~tv~H~IDe~SPL~~~t~~~L~~~~~EivV~l~G~dest~~t~qaR~SY~~~eIlWg~rF~~iv~~~~G~~~VD 179 (208)
T 3agw_A 100 LFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVD 179 (208)
T ss_dssp CCCSSCEEEEEECCTTSTTTTCCTTTGGGCCCEEEEEEEEEETTTCSEEEEEEEEEGGGEEETEEECCCEEEETTEEEEC
T ss_pred eEEeccEEEEEECCCCCCccccCHhHHhcCCeEEEEEEEEEehhhCcEEEEEEEEChHHEEeCCEeeeeEEecCCeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987433 499
Q ss_pred eeeeecccccCcccccc
Q psy4010 1021 TSSIHMFVPNGLSKECK 1037 (1527)
Q Consensus 1021 ~~~Fh~v~P~~l~~~c~ 1037 (1527)
+++||+++|... ..|+
T Consensus 180 ~s~F~~~~pv~~-p~~s 195 (208)
T 3agw_A 180 YNSFHETYETST-PSLS 195 (208)
T ss_dssp GGGTTCEEECCC-CCSC
T ss_pred hHHcCcceecCC-CcCC
Confidence 999999999873 3344
No 21
>2xky_I Inward rectifier potassium channel 2; ION channel, metal transport, membrane protein; 17.20A {Mus musculus}
Probab=100.00 E-value=8.2e-45 Score=405.11 Aligned_cols=178 Identities=43% Similarity=0.706 Sum_probs=163.8
Q ss_pred HHHHHHcC---cccccceeeeccceEEeecCCeEEEEEEEeeCCCCceeEeeEEEEEEEEeEecCCCceecceeeeeeee
Q psy4010 859 LVFAKVAR---PKQRTQTLLFSRTAVINQRDGHLCLMFRVGDMREKSHIIGASVKAYLVKARTTAEGEVLNPFLSELKLH 935 (1527)
Q Consensus 859 lVFAKfSR---PkkRA~TIlFSk~AVIs~rDG~~cLMFRVaNlR~ks~LIea~Vrv~Lir~~~T~EGE~~r~~q~~L~L~ 935 (1527)
+.|+++++ +++||+||+||++|||+++||++||||||||+| +++|+||+||++|++.++|+||+.+++.+++|++.
T Consensus 56 V~f~~~~~k~qrr~RA~TI~FS~~AVI~~rDG~~cLMFRVaN~R-~s~Iiea~Vr~~Lir~~~T~EGe~i~~~~~dL~l~ 134 (309)
T 2xky_I 56 VQFINVGEKGQRGGRNETLVFSHNAVIAMRDGKLCLMWRVGNLR-KSHLVEAHVRAQLLKSRITSEGEYIPLDQIDINVG 134 (309)
T ss_pred eEEeecCcccccCCCcceEEEeccEEEEEECCEEEEEEEEecCc-CCeEEccEEEEEEEEEEEcCCCcEEEeeeeeeecc
Confidence 34565554 378899999999999999999999999999999 99999999999999999999999999888999999
Q ss_pred ecccCCceeeecceEEEEecCCCCCCcccCHhhhccCCEEEEEEEEeeeccccceEEEeecccCCccccCCccccceecc
Q psy4010 936 IDQYDSDIFLLWPTIVVHRIDEESPLYDMAAKKLLTEKFEIIAILEGTTESTGQTTQAKTSYLPSEILWGHRFEPLVRSV 1015 (1527)
Q Consensus 936 rd~~~~~~fL~lPwTVvHvIDE~SPLY~lT~edL~~~dfEIVV~LeG~DEsTgqtVqARtSY~~~EIlWGhRF~pmI~~d 1015 (1527)
.|.+.+++||.+||||+|+||++||||++++++|.+.+|||||+|+|+||+|||++|||+||.++||+|||||+||+..+
T Consensus 135 ~d~~~~~~fL~~P~tV~H~IDe~SPLy~~t~e~L~~~dfEIVV~LeG~dEsTgqtvqARtSY~~~EIlWGhRF~piv~~~ 214 (309)
T 2xky_I 135 FDSGIDRIFLVSPITIVHEIDEDSPLYDLSKQDIDNADFEIVVILEGMVEATAMTTQCRSSYLANEILWGHRYEPVLFEE 214 (309)
T ss_pred cCCCCcceeEeccEEEEEECCCCCCccccChhhHhcCCeEEEEEEEEEecccCceEEEEEEEchHHeeeCCEeceeEEcC
Confidence 98777889999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cc--ceeeeeeecccccCcccccc
Q psy4010 1016 SK--QLVTSSIHMFVPNGLSKECK 1037 (1527)
Q Consensus 1016 ~k--~iD~~~Fh~v~P~~l~~~c~ 1037 (1527)
+. .+|+++||+++|..-.-.|+
T Consensus 215 ~G~y~VD~s~Fh~t~pv~~tP~cS 238 (309)
T 2xky_I 215 KHYYKVDYSRFHKTYEVPNTPLCS 238 (309)
T ss_pred CCeEEEEhHHcCcceecCCCCCCC
Confidence 43 49999999999876334455
No 22
>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}
Probab=99.86 E-value=9.6e-24 Score=238.49 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=86.3
Q ss_pred HHHHHHH----HHHhhhhhcCChhhHHHHHHHhcHHHHhcCCcccccccccccccccccccccccCCHHHHHHHHHHHHh
Q psy4010 1114 RKLFSQS----MSEMYKKQVPQYSTLLELVRQVNLDTLANSGKLDEMSAEDLERLNEERHGAIRLGTPEELYNIRRLFSV 1189 (1527)
Q Consensus 1114 R~~f~~a----ms~mY~~EVP~Y~~L~~lv~~vn~~~l~~~~~~~~~~~~~~~rl~~ERHGAIR~Gt~~El~~~~r~fav 1189 (1527)
|+.|++| |=+-|.+.||.=++-++.+.. + ++.-..+-+.+--+.++.+||+.+| |++++|+|++
T Consensus 42 r~e~a~~l~~~Lw~~Y~~r~P~a~~~v~~~~~-------~-g~~i~nDHiA~RT~~~~~~g~l~~g----l~~lariF~~ 109 (340)
T 3iuz_A 42 RAEIAQALNMVLFAGILDRVPTGRAYTDDVAA-------T-GGXVVFDHGALRTVXWRDNGALPEG----EAAFTRILRP 109 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH-------T-TCCBCEEEEEEEEECCSCCTTSCST----THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHh-------C-CCCeecceeEEEeeecCCcCcCchh----HHHHHHHHHH
Confidence 6667777 667799999976664444422 1 2222224455667788999999998 8999999999
Q ss_pred hCCeecccccCCCCCCCceecccccCChhhhhcCCcchhhhhhhhhhccch
Q psy4010 1190 MNMHPVGYYDLSTAGVPVHSTAFRSIDAYALNQSPFRVFTSLLRLELIEDK 1240 (1527)
Q Consensus 1190 mgM~pVgyYDl~~agvPvhsTaFRp~~~~~L~~npFrvftslLr~eli~~~ 1240 (1527)
|||+|||||||+.+ +||+|||||+|.. .||||||||+||+|+|+++
T Consensus 110 lGy~p~G~Ydl~~k--~l~a~afrp~d~~---~~~pRVF~SeL~~e~ls~~ 155 (340)
T 3iuz_A 110 LGYRLNGNYPLDRI--SMTGRSYAHADAP---EGIAQFFVSEFHPERFSDA 155 (340)
T ss_dssp HTEEEEEEEEEGGG--TEEEEEEEETTCT---TTSCEEEEEEECCTTSCHH
T ss_pred cCCeEcceeccCCC--CCeEEEecCCCCC---CCCCeEEEeecchhhCCHH
Confidence 99999999999987 5888999999942 8999999999999998743
No 23
>2rjb_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Shigella flexneri}
Probab=99.83 E-value=1e-21 Score=224.87 Aligned_cols=102 Identities=56% Similarity=0.863 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHhhcccccchhccccCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeeccccc
Q psy4010 157 IVSYDTYQTLLDTHSLVADIVCFKTPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFKA 236 (1527)
Q Consensus 157 lvFa~iyw~La~~H~llaDIv~f~~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~A 236 (1527)
.+....|..|..+|+++|||+||+++|||||||||||||.+|..|.+ +| ..+|+.|||||+|+||||||||||+|
T Consensus 195 ~v~~~~Y~~L~~~h~~~AdI~~f~g~hiNHLTpRvlDId~vq~~M~~----~G-i~~K~~IEgpp~r~~PILLRQTSFkA 269 (455)
T 2rjb_A 195 TVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPE----CG-IEPKILIEGPPRREVPILLRQTSFKA 269 (455)
T ss_dssp SSCHHHHHHHHHHCHHHHHHHSSSSCCCSEEEEBCSCHHHHHHHTGG----GT-CCCCSCCBSSCCCSSCBSEEEEEEEE
T ss_pred CCCHHHHHHHHHhhHHhhhhhccCCcccccCCCcccCHHHHHHHHHH----cC-CCcccceeCCCCCCCCeeeeeccccc
Confidence 46677899999999999999999999999999999999999999985 56 56899999999999999999999999
Q ss_pred cccccccCCCCccceeeeeeeeEEEee
Q psy4010 237 LTEDIAVPGRDVGSISIFNGQFFLRGL 263 (1527)
Q Consensus 237 l~e~i~f~~~~~g~~s~f~gaFlfs~e 263 (1527)
+.|++.|.+...|+|+++||+|..|+.
T Consensus 270 l~e~~~F~~~~~GshtaRFgEieqRG~ 296 (455)
T 2rjb_A 270 LEETVLFAGQKQGTHTARFGEIEQRGV 296 (455)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEEECB
T ss_pred ccccccccCCCCCceeeeeeeeeeccc
Confidence 999999987756999999999988864
No 24
>3iuz_A Putative glyoxalase superfamily protein; struct genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: MLY P6G PGE; 1.90A {Ralstonia eutropha}
Probab=99.20 E-value=2e-12 Score=146.97 Aligned_cols=98 Identities=21% Similarity=0.138 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhhcccccchhccccCcccCCCCCCcchhhHHHHHhhhcccCCcccccccccCCCCCCcceeeeecccc
Q psy4010 156 WIVSYDTYQTLLDTHSLVADIVCFKTPHINHLTPSTLDIDRVQDRMVAQMSRHGSCVPKAVIEGPPRREVPILLRQTSFK 235 (1527)
Q Consensus 156 WlvFa~iyw~La~~H~llaDIv~f~~~hiNHltPrtLDId~~q~~m~~~~~~~g~cv~k~~ieGPp~~~~PillrqtSF~ 235 (1527)
|.+....|..|+.+|++.||| ++.++||||+|||++||+.+|+.|.+ +| ..+|+.|||||. ++||||||+
T Consensus 209 ~~~s~~~Y~~L~~eS~~AAWv-a~~G~~iNHlT~rv~DId~v~~~m~~----~G-~~~k~~IeGsP~----~lLrQTSf~ 278 (340)
T 3iuz_A 209 GVPRLADYETLLRESAEMAWI-ATEGNAFNHATDRVDDVFGLSEQQXA----LG-RPMXDXVEVSGS----GRVXQTAFR 278 (340)
T ss_dssp CCCBHHHHHHHHHHCHHHHHH-HHHTTSCSEEEEECSCHHHHHHHHHH----TT-CCBCSCCEECTT----SSEEEEEBC
T ss_pred CCCCHHHHHHHHHhChHHhhh-hhcCCccccccCCcCCHHHHHHHHHH----cC-CChhhhhcCCcc----cceeeeecc
Confidence 357778999999999986655 55688999999999999999999985 46 468889999998 499999999
Q ss_pred ccccccccCCCC----ccceeeeeeeeEEEee
Q psy4010 236 ALTEDIAVPGRD----VGSISIFNGQFFLRGL 263 (1527)
Q Consensus 236 Al~e~i~f~~~~----~g~~s~f~gaFlfs~e 263 (1527)
|..+++.|.+++ .+.|++.|++|..|..
T Consensus 279 A~~e~v~F~d~~G~~v~~~ip~~F~EfaqR~~ 310 (340)
T 3iuz_A 279 ADTVRRQFIGAQGETVERDVPGSFYEFITRDR 310 (340)
T ss_dssp CCEEEEEEECTTSCEEEEEEECCEEEEEEECB
T ss_pred ccceEEEEecCCCceeeeeeeeEEEEeeeccc
Confidence 999999998644 3789999999999984
No 25
>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}
Probab=98.95 E-value=1.4e-10 Score=128.54 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=77.3
Q ss_pred HHHHHHHHhhhhhcCChhhHHHHHHHhcHHHHhcCCcccccccccccccccccccccccCC--HHHHHHHHHHHHhhCCe
Q psy4010 1116 LFSQSMSEMYKKQVPQYSTLLELVRQVNLDTLANSGKLDEMSAEDLERLNEERHGAIRLGT--PEELYNIRRLFSVMNMH 1193 (1527)
Q Consensus 1116 ~f~~ams~mY~~EVP~Y~~L~~lv~~vn~~~l~~~~~~~~~~~~~~~rl~~ERHGAIR~Gt--~~El~~~~r~favmgM~ 1193 (1527)
.|-.+|=+-|.+.||.=++..+++.+ .... .=-|+|.|--. +-+|+.++|+|+.|||+
T Consensus 8 ~l~~~Lw~~Y~~~~P~a~~i~~l~~~--------~~~i------------~nDHiA~RT~~~~~~gi~~la~~F~~lGY~ 67 (267)
T 3lho_A 8 ALFAALWQDYIKMTPSAAKIHQLLGH--------GAPI------------INDHIALRTFNIAKVNLSVLAKHFTSIGYV 67 (267)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHT--------TSCC------------CEEEEEEEEESCGGGCHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHhc--------CCce------------ecceEEEEecCCCCccHHHHHHHHHHcCCe
Confidence 34455667788899977776655542 1111 12477777433 56899999999999999
Q ss_pred ecccccCCCCCCCceecccccCChhhhhcCCcchhhhhhhhhhccchh
Q psy4010 1194 PVGYYDLSTAGVPVHSTAFRSIDAYALNQSPFRVFTSLLRLELIEDKV 1241 (1527)
Q Consensus 1194 pVgyYDl~~agvPvhsTaFRp~~~~~L~~npFrvftslLr~eli~~~~ 1241 (1527)
|+|||||..+ ++|+|+|||.| .||||||+|.||+|.+.++.
T Consensus 68 ~~G~Y~f~~k--kL~A~~f~hpd-----~~~prvFiSEL~ve~lS~~~ 108 (267)
T 3lho_A 68 DSGDYKFEQK--KLIAKHFEHPD-----PKQPKVFISELLVEEFSPEV 108 (267)
T ss_dssp EEEEEEETTT--TEEEEEEECSS-----TTSCEEEEEEECGGGSCHHH
T ss_pred EcceeccCCC--ccEEEEeCCCC-----CCCCeEEEeeccHhhCCHHH
Confidence 9999999886 79999999998 79999999999999998555
No 26
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=98.87 E-value=5.1e-10 Score=107.25 Aligned_cols=82 Identities=21% Similarity=0.227 Sum_probs=68.1
Q ss_pred ceeeehhhHHHHhhhcCCccccCCCCCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHH
Q psy4010 772 VLKSFACIWWLLAYTHGDVLSENQNNPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTI 851 (1527)
Q Consensus 772 villFAlIYylIa~~hGDl~~~~~~~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlL 851 (1527)
+++++|.+||.+-.. + + + ....+|.+|||||+.|+||||||++.|.+ +.+++++.+++++|++
T Consensus 18 ~~~~~a~~~~~~E~~--~-----~-~-------~~~~~~~~a~y~~~~T~tTvGyGDi~P~t--~~gr~~~~~~~l~G~~ 80 (103)
T 2k1e_A 18 VLEEASKKAVEAERG--A-----P-G-------AALISYPDAIWWSVETATTVGYGDRYPVT--EEGRKVAEQVMKAGIE 80 (103)
T ss_dssp HHHHHHHHHHHHHTT--S-----T-T-------CCCCCGGGTTTTTTGGGGCCSCCSSCCCS--SSCTHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccC--C-----C-C-------cccccHHHHHHHHHHHHhcccCCCCCCCC--hhHHHHHHHHHHHHHH
Confidence 447788888877421 1 0 0 23468999999999999999999999876 6799999999999999
Q ss_pred HHHHHHHHHHHHHcCcccc
Q psy4010 852 IQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 852 l~A~ltGlVFAKfSRPkkR 870 (1527)
+.++++|.+.+.+.+..+|
T Consensus 81 ~~~~~~~~i~~~~~~~~~~ 99 (103)
T 2k1e_A 81 VFALVTAALATDFVRREEE 99 (103)
T ss_dssp HHHHTHHHHHTTGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887765
No 27
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=98.84 E-value=1.4e-09 Score=111.94 Aligned_cols=82 Identities=21% Similarity=0.185 Sum_probs=68.3
Q ss_pred ceeeehhhHHHHhhhcCCccccCCCCCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHH
Q psy4010 772 VLKSFACIWWLLAYTHGDVLSENQNNPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTI 851 (1527)
Q Consensus 772 villFAlIYylIa~~hGDl~~~~~~~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlL 851 (1527)
++++||++||.+... + + -.+..++.+|||||+.|+||||||+++|.+ +.+.+++++++++|++
T Consensus 62 ~i~~~a~~~~~~E~~--~-----~--------~~~~~s~~~a~y~s~vTltTVGYGDi~P~t--~~gr~~~~~~~l~Gv~ 124 (155)
T 2a9h_A 62 VLLAGSYLAVLAERG--A-----P--------GAALISYPDALWWSVETATTVGYGDLYPVT--LWGRCVAVVVMVAGIT 124 (155)
T ss_dssp HHHHHHHHHHHHHTT--S-----S--------CSSTTSHHHHHHHHHHHHTTCCCSSSCCCS--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc--C-----C--------CCccCcccceeheeeeeeecccCCCCCCCC--hhHHHHHHHHHHHHHH
Confidence 347788888876421 1 0 124579999999999999999999999987 6899999999999999
Q ss_pred HHHHHHHHHHHHHcCcccc
Q psy4010 852 IQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 852 l~A~ltGlVFAKfSRPkkR 870 (1527)
+.++++|.+.+.+++..++
T Consensus 125 ~~a~~~~~i~~~~~~~~~~ 143 (155)
T 2a9h_A 125 SYGLVFAAVATWFVGREQE 143 (155)
T ss_dssp HHHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988765
No 28
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=98.74 E-value=3.2e-09 Score=104.81 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=66.8
Q ss_pred eeeehhhHHHHhhhcCCccccCCCCCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHH
Q psy4010 773 LKSFACIWWLLAYTHGDVLSENQNNPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTII 852 (1527)
Q Consensus 773 illFAlIYylIa~~hGDl~~~~~~~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl 852 (1527)
++++|.+||.+... + + ..+..++.+|||||+.|+|||||||..|.+ +.+.+++.+.+++|+.+
T Consensus 40 ~~~~a~~~~~~E~~--~-----~--------~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t--~~gr~~~~~~~~~Gi~~ 102 (122)
T 2ih3_C 40 LLAGSYLAVLAERG--A-----P--------GAQLITYPRALWWACETATTVAYGDLYPVT--LWGRLVAVVVMVAGITS 102 (122)
T ss_dssp HHHHHHHHHHHHTT--S-----T--------TCCCCSHHHHHHHHHHHHTTCCCSSSCCCS--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhheeeec--C-----C--------CCccCccccchhheeeeeeeeecCCCCCCC--ccHHHHHHHHHHHHHHH
Confidence 36677777776421 1 0 023578999999999999999999999987 67999999999999999
Q ss_pred HHHHHHHHHHHHcCcccc
Q psy4010 853 QAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 853 ~A~ltGlVFAKfSRPkkR 870 (1527)
.++.+|.+.+.+++..++
T Consensus 103 ~~~~~~~i~~~~~~~~~~ 120 (122)
T 2ih3_C 103 FGLVTAALATWFVGREQE 120 (122)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999877654
No 29
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=98.70 E-value=2.5e-09 Score=106.92 Aligned_cols=63 Identities=21% Similarity=0.271 Sum_probs=56.4
Q ss_pred cccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 806 GVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
...+|.+|||||+.|+||||||+.+|.+ +.+.+++++.+++|+.+.++++|.+...+.+..++
T Consensus 37 ~~~~~~~a~yf~~~T~tTvGyGd~~P~t--~~~r~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 99 (139)
T 3eff_K 37 QLITYPRALWWSVETATTVGYGDLYPVT--LWGRLVAVVVMVAGITSFGLVTAALATWFVGREQE 99 (139)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCSSSCCCS--SHHHHHHHHHHHHHHHHHHHHHHHHTTTTTHHHHH
T ss_pred ccCCHHHHHHHHheeeecccCCCCcCCC--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999988 56999999999999999999999998888765543
No 30
>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}
Probab=98.61 E-value=3.9e-09 Score=117.01 Aligned_cols=98 Identities=28% Similarity=0.303 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHhhcccccchhccccCcccCCCCCC------cchhhHHHHHhhhcccCCcccccc---cccCCCCCCc
Q psy4010 155 SWIVSYDTYQTLLDTHSLVADIVCFKTPHINHLTPST------LDIDRVQDRMVAQMSRHGSCVPKA---VIEGPPRREV 225 (1527)
Q Consensus 155 SWlvFa~iyw~La~~H~llaDIv~f~~~hiNHltPrt------LDId~~q~~m~~~~~~~g~cv~k~---~ieGPp~~~~ 225 (1527)
.|-.....|..|+.+|+.+||+.++ +.|+||+||++ +||+.+++.|.+ +| ..+|+ .|+|||.
T Consensus 135 ~W~p~~~~Y~~L~~ese~aAWv~~~-G~~~NH~T~~v~~L~~~~dI~~v~~~l~~----~G-~~~n~~Gg~Ikgsp~--- 205 (267)
T 3lho_A 135 HWDVDKATYQALLAESEYAAWVAAL-GYRANHFTVSINDLPEFERIEDVNQALKQ----AG-FVLNSSGGEVKGSPE--- 205 (267)
T ss_dssp CSCCCHHHHHHHHHHCHHHHHHHHH-CBSCSEEEEETTTCTTCCCHHHHHHHHHH----TT-CCBCCTTCSSEEEGG---
T ss_pred CCCCCHHHHHHHHHhChHHHHHhhc-CCccceeehhhcccCCCCCHHHHHHHHHH----cC-CCcccCCCEEEECCC---
Confidence 4667778999999999999977655 79999999999 999999999985 45 34665 8999987
Q ss_pred ceeeeeccccccccccccCCCCccceeeeeeeeEEEee
Q psy4010 226 PILLRQTSFKALTEDIAVPGRDVGSISIFNGQFFLRGL 263 (1527)
Q Consensus 226 PillrqtSF~Al~e~i~f~~~~~g~~s~f~gaFlfs~e 263 (1527)
++||||||+|..+++.|.++. ..+.+.+++|..|..
T Consensus 206 -~lLrQtSt~A~~~~v~F~dg~-~~ipg~fyEFa~R~~ 241 (267)
T 3lho_A 206 -VLLEQSSTMADKVVVNFTDGD-VEIPSCFYEFARRYP 241 (267)
T ss_dssp -GTEEEEEBCCCEEEEEETTEE-EEEECCCCEEEEECB
T ss_pred -CcEEEEEccccceeEEecCCc-eecCceEEEEEEecc
Confidence 999999999999999998643 346666777777653
No 31
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=98.61 E-value=2.2e-09 Score=110.74 Aligned_cols=63 Identities=21% Similarity=0.281 Sum_probs=57.1
Q ss_pred cccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 806 GVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
...+|.+|||||+.|+||||||+.+|.+ +.+.+++++.+++|+++.++++|.+.+.+....++
T Consensus 64 ~~~~~~~a~yf~~~T~tTvGyGDi~P~t--~~~r~~~~~~~l~G~~~~~~~~~~i~~~~~~~~~~ 126 (166)
T 3pjs_K 64 QLITYPRALWWSVETATTVGYGDLYPVT--LWGRLVAVVVMVAGITSFGLVTAALATWFVGQEQQ 126 (166)
T ss_dssp CCCSTTTTTTTTHHHHSCCCCSSSCCCS--STTTTTTHHHHHHHHHHHHHHHTTSSSSSSSSHHH
T ss_pred ccCCHHHHHHHHHHHhccccCCCCCCCC--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999999988 56899999999999999999999999998877654
No 32
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=98.54 E-value=2.5e-08 Score=100.31 Aligned_cols=62 Identities=23% Similarity=0.371 Sum_probs=55.5
Q ss_pred ccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 807 VNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 807 v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
..++.+|+|||+.|+|||||||.+|.+ +.+.+++++.+++|+.+.++++|.+...+..-+.+
T Consensus 41 ~~~~~~a~y~~~~T~tTvGyGDi~P~t--~~gr~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~ 102 (137)
T 4h33_A 41 INNYPDALWWAIVTATTVGYGDIVPVT--PIGRILASIMMLFGIAFIGMITSTITNFFRCKKPT 102 (137)
T ss_dssp CCSHHHHHHHHHHHHTTCCCSSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTC
T ss_pred CCCHHHHHHHHHHHHHcccCCCCCCCC--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999987 68999999999999999999999998877654443
No 33
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=98.43 E-value=9.5e-08 Score=88.50 Aligned_cols=55 Identities=25% Similarity=0.437 Sum_probs=50.4
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKV 864 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKf 864 (1527)
.+|.+|+|||+.|+|||||||..|.+ +.+++++.+.++.|+.+.+..+|.+-..+
T Consensus 27 ~~~~~a~yf~~~T~tTvGyGdi~P~t--~~~r~~~~~~~~~G~~~~~~~~~~i~~~l 81 (82)
T 3ldc_A 27 ESWTVSLYWTFVTIATVGYGDYSPHT--PLGMYFTCTLIVLGIGTFAVAVERLLEFL 81 (82)
T ss_dssp CCHHHHHHHHHHHHTTCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcccCCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999977 68999999999999999999999887654
No 34
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=98.39 E-value=1e-07 Score=100.75 Aligned_cols=60 Identities=20% Similarity=0.302 Sum_probs=55.1
Q ss_pred cccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Q psy4010 806 GVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARP 867 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRP 867 (1527)
+..++.+|+||++.|+||||||+.+|.+ +.+.+++.+.+++|+.+.++.+|.+.+.+.+.
T Consensus 162 ~~~~~~~s~y~~~~t~tTvGyGdi~P~t--~~~~~~~~~~~~~G~~~~~~~i~~i~~~~~~~ 221 (223)
T 1orq_C 162 SIKSVFDALWWAVVTATTVGYGDVVPAT--PIGKVIGIAVMLTGISALTLLIGTVSNMFQKI 221 (223)
T ss_dssp SCCSHHHHHHHHHHHHTTCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcchhHHHhHHhHHhccCCCCCCCCC--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999877 78999999999999999999999999988763
No 35
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A
Probab=98.39 E-value=9.9e-08 Score=91.01 Aligned_cols=61 Identities=21% Similarity=0.166 Sum_probs=56.0
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
.+|.+|+||++.|+||||||+..|.+ +.+++++.+.+++|+.+.+.++|.+..++..++-+
T Consensus 31 ~~~~~a~yf~~~T~tTvGyGdi~P~t--~~gr~~~~~~~~~G~~~~~~~i~~i~~~~~~~~~~ 91 (97)
T 3ouf_A 31 LRPIDALYFSVVTLTTVGYGDFSPQT--DFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPSIL 91 (97)
T ss_dssp CCHHHHHHHHHHHHTTCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57899999999999999999999977 67999999999999999999999999998877643
No 36
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=98.24 E-value=6.9e-07 Score=87.50 Aligned_cols=60 Identities=20% Similarity=0.128 Sum_probs=53.5
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQ 869 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkk 869 (1527)
.++.+|||||+.|+||||||+..|.+ +.+.+++.+.+++|+.+.+..++.+.++++..+.
T Consensus 48 ~~~~~a~y~~~~T~tTvGyGdi~P~t--~~gr~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~ 107 (114)
T 2q67_A 48 LRPIDALYFSVVTLTTVGAGNFSPQT--DFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPSI 107 (114)
T ss_dssp CCHHHHHHHHHHHHTSCCCSSCCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCHHHHHHHHHHHhcceeCCCCccCC--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999977 6799999999999999999999999999876654
No 37
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}
Probab=98.23 E-value=4.1e-07 Score=92.08 Aligned_cols=53 Identities=19% Similarity=0.085 Sum_probs=48.8
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFA 862 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFA 862 (1527)
.+|.+|||||+.|+||||||+.+|.+ +.+.+++++.+++|+.+.+.++|.+..
T Consensus 51 ~~~~~a~y~~~~t~tTvGyGd~~p~t--~~~r~~~~~~~~~g~~~~~~~~~~~~~ 103 (148)
T 3vou_A 51 LRPLDALYFSVVTLTTVGDGNFSPQT--DFGKVFTILYIFIGIGLVFGFIHKLAV 103 (148)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSCCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHccCCCCCCCCC--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47999999999999999999999977 679999999999999999999887764
No 38
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=98.22 E-value=2.5e-07 Score=103.83 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=67.5
Q ss_pred ceeeehhhHHHHhhhcCCccccCCCCCCCccccccccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHH
Q psy4010 772 VLKSFACIWWLLAYTHGDVLSENQNNPQFVPCVIGVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTI 851 (1527)
Q Consensus 772 villFAlIYylIa~~hGDl~~~~~~~~~~~pCv~~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlL 851 (1527)
++++||++||.+.. +.. -.+..++.+|+||++.|+||+|||+++|.+ +.+.+++++.+++|++
T Consensus 139 ~~~~~a~~~~~~e~---~~~------------~~~f~~~~~s~y~~~~t~ttvGygd~~p~t--~~~~~~~~~~~~~g~~ 201 (355)
T 3beh_A 139 VLFAVALAAYVIER---DIQ------------PEKFGSIPQAMWWAVVTLSTTGYGDTIPQS--FAGRVLAGAVMMSGIG 201 (355)
T ss_dssp HHHHHHHHHHHHHT---TTC------------HHHHSSHHHHHHHHHHHHTTCCCSSSCCCS--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc---CCC------------CcccccHHHHHHHHHhheeecCCCCCCCCC--hhHHHHHHHHHHHHHH
Confidence 44778888888742 110 023568999999999999999999999876 7899999999999999
Q ss_pred HHHHHHHHHHHHHcCcccc
Q psy4010 852 IQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 852 l~A~ltGlVFAKfSRPkkR 870 (1527)
+.++.+|.+...+.+-.+|
T Consensus 202 ~~~~~~~~i~~~~~~~~~~ 220 (355)
T 3beh_A 202 IFGLWAGILATGFYQEVRR 220 (355)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875544
No 39
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=98.09 E-value=1.2e-06 Score=104.47 Aligned_cols=50 Identities=16% Similarity=0.393 Sum_probs=46.3
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGL 859 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGl 859 (1527)
.+|.+||||++.|+||||||+..|.+ +.+.+++++.+++|+++.++++|.
T Consensus 50 ~~~~~~~y~~~~t~tTvGygd~~p~~--~~~~~~~~~~~~~g~~~~~~~~~~ 99 (565)
T 4gx0_A 50 YSFMAGIYWTITVMTTLGFGDITFES--DAGYLFASIVTVSGVIFLDIILPF 99 (565)
T ss_dssp CCHHHHHHHHHHHHTTCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CchhhhhheeeeeeeeecCCCcCCCC--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999877 679999999999999999888877
No 40
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=98.00 E-value=1.7e-06 Score=103.53 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=55.9
Q ss_pred cccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc---cceeeeccceEE
Q psy4010 806 GVNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR---TQTLLFSRTAVI 882 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR---A~TIlFSk~AVI 882 (1527)
+..+|.+||||++.|+||||||++.|.+ +.+.+++++.+++|+++.++.+|++...|++-.++ .+.-...++.++
T Consensus 372 ~F~s~~~a~y~~~vT~TTvGYGDi~P~t--~~gr~f~~~~~l~G~~~l~l~iavI~~~f~~~~~~~~~~~~~~l~~h~ii 449 (514)
T 2r9r_B 372 QFPSIPDAFWWAVVSMTTVGYGDMVPTT--IGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTS 449 (514)
T ss_dssp SCSSHHHHHHHHHHHHTTCCCSSSCCCS--HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHC-------------
T ss_pred cccchhhhhheeeeEEEecccCCCCCCC--cchHhhehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEE
Confidence 5689999999999999999999999877 56899999999999999999999999888765332 122345666777
Q ss_pred eecCC
Q psy4010 883 NQRDG 887 (1527)
Q Consensus 883 s~rDG 887 (1527)
|.++.
T Consensus 450 cg~~~ 454 (514)
T 2r9r_B 450 SPKIP 454 (514)
T ss_dssp -----
T ss_pred eCCCc
Confidence 76554
No 41
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.91 E-value=7.3e-07 Score=99.41 Aligned_cols=60 Identities=23% Similarity=0.361 Sum_probs=51.5
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQ 869 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkk 869 (1527)
.+|.+||||++.|+||||||+.+|.+ +.+.+++++.+++|+++.++++|.+...+.....
T Consensus 44 ~~~~~a~y~~~~t~tTvGyGd~~p~t--~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 103 (336)
T 1lnq_A 44 ESWTVSLYWTFVTIATVGYGDYSPST--PLGMYFTVTLIVLGIGTFAVAVERLLEFLINREQ 103 (336)
T ss_dssp CCSSTTHHHHHHHHTTCCCSSCCCCC--SSHHHHHTHHHHTTSTTTTTHHHHHTTTC-----
T ss_pred CCHHHHHHHHHHHhhcccCCCCCCCC--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999977 5799999999999999999999999988887653
No 42
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=97.66 E-value=2.3e-05 Score=89.02 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=52.1
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVAR 866 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSR 866 (1527)
-+|.+||||++.|+||||||+++|.+ +.+++++++.+++|+.+.+++++.+-..+++
T Consensus 114 w~~~~a~yf~~~t~tTvGYGdi~P~T--~~gk~~~i~~~l~Gi~~~~~~~~~i~~~l~~ 170 (309)
T 3um7_A 114 WDLGSAFFFSGTIITTIGYGNVALRT--DAGRLFCIFYALVGIPLFGILLAGVGDRLGS 170 (309)
T ss_dssp CSHHHHHHHHHHHHTSCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhHhhheeeeecccCCCCCCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999988 6799999999999999999999887766654
No 43
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=97.53 E-value=4e-05 Score=86.00 Aligned_cols=61 Identities=18% Similarity=0.269 Sum_probs=54.8
Q ss_pred ccchhhHHHhheeeeeeeccCCCccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Q psy4010 807 VNSFASSLLFSIETQHTIGYGSRSTTTECPEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQ 869 (1527)
Q Consensus 807 v~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkk 869 (1527)
.-+|.+||||++.|+||||||+.+|.+ +.|++++++-+++|+.+.+++++.+..++.....
T Consensus 91 ~w~~~~a~yf~~~t~tTvGyGd~~P~T--~~Gk~f~~~~~l~Gi~~~~~~~~~~~~~l~~~~~ 151 (280)
T 3ukm_A 91 NWDFTSALFFASTVLSTTGYGHTVPLS--DGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVT 151 (280)
T ss_dssp CSSHHHHHHHHHHHHTTCCCCSSCCCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCChhcchhheeeeeeccccCCcCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999988 6899999999999999999999988877765543
No 44
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=96.95 E-value=0.00045 Score=78.56 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=50.8
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTEC----PEAIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~C----p~a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
-+|.+|+||++.|+||||||+..|.+.- |...+++++-+++|+.+.+++++.+-..+..-++|
T Consensus 223 ~~~~da~y~~~vTltTvGyGd~~p~t~~g~~~~~y~~~~~~~il~Gl~~~a~~~~~i~~~~~~~~~r 289 (309)
T 3um7_A 223 WSKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRR 289 (309)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSCCTTCCTTCCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CCHHHHHHHHHhheeccccCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999997642 12235889999999999999999876655544444
No 45
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=96.85 E-value=0.00068 Score=76.23 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=47.0
Q ss_pred cchhhHHHhheeeeeeeccCCCccCCCCc-----hhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4010 808 NSFASSLLFSIETQHTIGYGSRSTTTECP-----EAIWLMCVQSIVGTIIQAFMTGLVF 861 (1527)
Q Consensus 808 ~sF~~AFlFSVET~TTIGYG~~~Pt~~Cp-----~a~lLv~lQalvGlLl~A~ltGlVF 861 (1527)
-+|.+|+||++.|+||||||+..|.+.-. .+.+++++-+++|+.+.+.+++.+.
T Consensus 200 ~s~~da~y~~~iTltTvGyGD~~p~t~~~~~~~~l~r~~~~~~il~Gl~~~~~~~~~i~ 258 (280)
T 3ukm_A 200 WNFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFC 258 (280)
T ss_dssp CCHHHHHHHHHHHHTTCCCCSCCSSCSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhhhheeeeeecccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999987531 4689999999999999999888653
No 46
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=95.57 E-value=0.0031 Score=69.24 Aligned_cols=65 Identities=9% Similarity=0.127 Sum_probs=50.3
Q ss_pred cccchhhHHHhheeeeeeeccC-CCc-cCCC-Cch-hHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Q psy4010 806 GVNSFASSLLFSIETQHTIGYG-SRS-TTTE-CPE-AIWLMCVQSIVGTIIQAFMTGLVFAKVARPKQR 870 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG-~~~-Pt~~-Cp~-a~lLv~lQalvGlLl~A~ltGlVFAKfSRPkkR 870 (1527)
+.++|.+|+|+.++|+||+||| +.. |... .|+ +.+++++-++.|+++.++.+|++...|+...+.
T Consensus 177 ~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~~~lnl~~aii~~~f~~~~~~ 245 (285)
T 3rvy_A 177 WFGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILNQK 245 (285)
T ss_dssp HHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred ccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999 873 5432 233 367888999999999999999999999887765
No 47
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=73.25 E-value=1.6 Score=41.69 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=22.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHhhhcCCCCC
Q psy4010 308 HGKQANLNDLSRLQAFMTGLVFAKVARPKQR 338 (1527)
Q Consensus 308 l~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkR 338 (1527)
.++++++| +.+-++++|.+.+.+.+.++|
T Consensus 71 ~~~~~l~G--~~~~~~~~~~i~~~~~~~~~~ 99 (103)
T 2k1e_A 71 AEQVMKAG--IEVFALVTAALATDFVRREEE 99 (103)
T ss_dssp HHHHHHHH--HHHHHHTHHHHHTTGGGHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 34667776 778899999999998877654
No 48
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=53.17 E-value=9.5 Score=39.35 Aligned_cols=28 Identities=7% Similarity=-0.163 Sum_probs=22.5
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhhcCCCCC
Q psy4010 309 GKQANLNDLSRLQAFMTGLVFAKVARPKQR 338 (1527)
Q Consensus 309 ~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkR 338 (1527)
++.+++| +.+-|+.+|.+.+.+++..++
T Consensus 116 ~~~~l~G--v~~~a~~~~~i~~~~~~~~~~ 143 (155)
T 2a9h_A 116 VVVMVAG--ITSYGLVFAAVATWFVGREQE 143 (155)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHSCCC-
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 4666776 788899999999999988765
No 49
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=48.31 E-value=8.4 Score=35.47 Aligned_cols=35 Identities=14% Similarity=0.037 Sum_probs=25.0
Q ss_pred ccccccChhhHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHhcccccCCCC
Q psy4010 1261 QRGIALTAKGRQLYDYLLDKTRGSFKGIPDETNSKLYMENLASNFSVFPDD 1311 (1527)
Q Consensus 1261 qRg~AlT~kGr~lYd~ll~~~~~~~~~~~~~~~~~~~~~~l~~~F~~fPD~ 1311 (1527)
.+.+.||+||+++++++... +.+..+++|+.|+|-
T Consensus 64 ~~~~~LT~~G~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 98 (99)
T 1tbx_A 64 EKRLYLTEKGKLFAISLKTA----------------IETYKQIKKRHHHHH 98 (99)
T ss_dssp EEEEEECHHHHHHHHHHHHH----------------HHHHHHHHHHHCC--
T ss_pred ceEEEECHHHHHHHHHHHHH----------------HHHHHHHHhcccccC
Confidence 45889999999999998765 334556667777663
No 50
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=46.69 E-value=8.9 Score=40.62 Aligned_cols=64 Identities=9% Similarity=0.079 Sum_probs=49.4
Q ss_pred cccchhhHHHhheeeeeeeccCCCc-c-CCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Q psy4010 806 GVNSFASSLLFSIETQHTIGYGSRS-T-TTECPEA-IWLMCVQSIVGTIIQAFMTGLVFAKVARPKQ 869 (1527)
Q Consensus 806 ~v~sF~~AFlFSVET~TTIGYG~~~-P-t~~Cp~a-~lLv~lQalvGlLl~A~ltGlVFAKfSRPkk 869 (1527)
+.++|.+|++-..+++||-||++.. + ....|.+ .+.++.-.+.+.++..+.+|++...|+.-++
T Consensus 162 ~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~~ 228 (229)
T 4dxw_A 162 RWGDLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSITILNLVIAILVDVVIQKKL 228 (229)
T ss_dssp TTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6789999999999999999999762 1 1112333 3456677788889999999999999987654
No 51
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=44.32 E-value=20 Score=35.66 Aligned_cols=18 Identities=39% Similarity=0.401 Sum_probs=14.7
Q ss_pred ccccChhhHHHHHHHHHH
Q psy4010 1263 GIALTAKGRQLYDYLLDK 1280 (1527)
Q Consensus 1263 g~AlT~kGr~lYd~ll~~ 1280 (1527)
-+.||+||+++++++...
T Consensus 94 ~v~LT~~G~~~~~~~~~~ 111 (148)
T 4fx0_A 94 RIELTAKGRAALQKAVPL 111 (148)
T ss_dssp -CCBCHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHH
Confidence 478999999999987754
No 52
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=37.27 E-value=28 Score=33.43 Aligned_cols=18 Identities=28% Similarity=0.248 Sum_probs=15.6
Q ss_pred ccccChhhHHHHHHHHHH
Q psy4010 1263 GIALTAKGRQLYDYLLDK 1280 (1527)
Q Consensus 1263 g~AlT~kGr~lYd~ll~~ 1280 (1527)
-+.||+||+++++++...
T Consensus 93 ~~~LT~~G~~~~~~~~~~ 110 (144)
T 3f3x_A 93 IVEITPKGRQVLLEANEV 110 (144)
T ss_dssp EEEECHHHHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHH
Confidence 578999999999988755
No 53
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=32.12 E-value=18 Score=36.01 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=16.2
Q ss_pred cccccChhhHHHHHHHHHHh
Q psy4010 1262 RGIALTAKGRQLYDYLLDKT 1281 (1527)
Q Consensus 1262 Rg~AlT~kGr~lYd~ll~~~ 1281 (1527)
.-+.||+||+++++++....
T Consensus 88 ~~l~LT~~G~~~~~~~~~~~ 107 (151)
T 4aik_A 88 KRIKLTEQSSPIIEQVDGVI 107 (151)
T ss_dssp EEEEECGGGHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHH
Confidence 35779999999999987553
No 54
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=31.64 E-value=15 Score=36.53 Aligned_cols=27 Identities=7% Similarity=-0.147 Sum_probs=19.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhhcCCCC
Q psy4010 309 GKQANLNDLSRLQAFMTGLVFAKVARPKQ 337 (1527)
Q Consensus 309 ~~Q~ilg~~~lIdAfmtGLVFAKfSRPkk 337 (1527)
++.+++| +.+-++++|.+...+.+..+
T Consensus 72 ~~~~~~G--~~~~~~~~~~i~~~~~~~~~ 98 (139)
T 3eff_K 72 VVVMVAG--ITSFGLVTAALATWFVGREQ 98 (139)
T ss_dssp HHHHHHH--HHHHHHHHHHHTTTTTHHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 3555665 77778888888888866544
No 55
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=23.56 E-value=40 Score=32.60 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=16.4
Q ss_pred cccccChhhHHHHHHHHHHh
Q psy4010 1262 RGIALTAKGRQLYDYLLDKT 1281 (1527)
Q Consensus 1262 Rg~AlT~kGr~lYd~ll~~~ 1281 (1527)
+-+.||+||+++++++....
T Consensus 99 ~~~~LT~~G~~~~~~~~~~~ 118 (148)
T 3jw4_A 99 KNIYVLPKGAALVEEFNNIF 118 (148)
T ss_dssp CCCCBCHHHHHHHHHHHHHH
T ss_pred heeeECHHHHHHHHHHHHHH
Confidence 35789999999999987653
No 56
>1ixc_A CBNR, LYSR-type regulatory protein; long alpha helix connecting DNA binding and regulatory domai binding protein; 2.20A {Cupriavidus necator} SCOP: a.4.5.37 c.94.1.1 PDB: 1iz1_A
Probab=21.93 E-value=34 Score=35.67 Aligned_cols=17 Identities=41% Similarity=0.642 Sum_probs=12.7
Q ss_pred ccccccChhhHHHHHHH
Q psy4010 1261 QRGIALTAKGRQLYDYL 1277 (1527)
Q Consensus 1261 qRg~AlT~kGr~lYd~l 1277 (1527)
.||+.||+.|+.||++.
T Consensus 52 ~~~~~lT~~G~~l~~~a 68 (294)
T 1ixc_A 52 HRGIELTAAGHAFLEDA 68 (294)
T ss_dssp ---CCBCHHHHHHHHHH
T ss_pred CCCeeECHhHHHHHHHH
Confidence 58999999999999764
No 57
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=21.84 E-value=22 Score=34.99 Aligned_cols=28 Identities=7% Similarity=-0.137 Sum_probs=20.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhhcCCCCC
Q psy4010 309 GKQANLNDLSRLQAFMTGLVFAKVARPKQR 338 (1527)
Q Consensus 309 ~~Q~ilg~~~lIdAfmtGLVFAKfSRPkkR 338 (1527)
++.+++| +.+-|+.+|.+.+.+++..++
T Consensus 93 ~~~~~~G--i~~~~~~~~~i~~~~~~~~~~ 120 (122)
T 2ih3_C 93 VVVMVAG--ITSFGLVTAALATWFVGREQE 120 (122)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHh
Confidence 4566666 677788899988888766543
No 58
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=21.26 E-value=38 Score=32.87 Aligned_cols=19 Identities=37% Similarity=0.361 Sum_probs=15.5
Q ss_pred ccccChhhHHHHHHHHHHh
Q psy4010 1263 GIALTAKGRQLYDYLLDKT 1281 (1527)
Q Consensus 1263 g~AlT~kGr~lYd~ll~~~ 1281 (1527)
-+.||+||+++++++....
T Consensus 97 ~~~LT~~G~~~~~~~~~~~ 115 (150)
T 3fm5_A 97 LIAATEEGRRLRDDAKARV 115 (150)
T ss_dssp -CEECHHHHHHHHHHHHHH
T ss_pred eeeECHHHHHHHHHHHHHH
Confidence 4789999999999987553
No 59
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=20.11 E-value=43 Score=32.07 Aligned_cols=20 Identities=35% Similarity=0.310 Sum_probs=16.5
Q ss_pred cccccChhhHHHHHHHHHHh
Q psy4010 1262 RGIALTAKGRQLYDYLLDKT 1281 (1527)
Q Consensus 1262 Rg~AlT~kGr~lYd~ll~~~ 1281 (1527)
..+.||+||+++++++....
T Consensus 93 ~~~~LT~~G~~~~~~~~~~~ 112 (143)
T 3oop_A 93 SLLSLTDKGRKETTELRDIV 112 (143)
T ss_dssp CEEEECHHHHHHHHHHHHHH
T ss_pred eeeeECHHHHHHHHHHHHHH
Confidence 45789999999999987653
No 60
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=20.01 E-value=40 Score=33.20 Aligned_cols=20 Identities=25% Similarity=0.316 Sum_probs=16.4
Q ss_pred cccccChhhHHHHHHHHHHh
Q psy4010 1262 RGIALTAKGRQLYDYLLDKT 1281 (1527)
Q Consensus 1262 Rg~AlT~kGr~lYd~ll~~~ 1281 (1527)
.-+.||+||+++++++....
T Consensus 109 ~~~~LT~~G~~~~~~~~~~~ 128 (161)
T 3e6m_A 109 RTVVLTRKGKKKLAEISPLI 128 (161)
T ss_dssp CEEEECHHHHHHHHHHHHHH
T ss_pred eEeeECHHHHHHHHHHHHHH
Confidence 35689999999999988653
Done!