RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4013
         (69 letters)



>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
           esterase) {Bacillus subtilis [TaxId: 1423]}
          Length = 483

 Score = 43.5 bits (101), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query: 1   MKARVANYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVMP 57
            +A   N GL+DQ AAL WV++NI+ FGGDP NVT+ G   G   I  L+  P    
Sbjct: 149 DEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKG 205


>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
           melanogaster) [TaxId: 7227]}
          Length = 571

 Score = 42.8 bits (99), Expect = 3e-07
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 6   ANYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVMP 57
            N GL DQ  A+ W++ N   FGG+P  +T+ G   G++ +N  ++SP    
Sbjct: 202 GNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRG 253


>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
           carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 532

 Score = 42.4 bits (98), Expect = 6e-07
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%)

Query: 7   NYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVMP--DRIIDQS 64
           N+G +DQ+AAL WVQ NIA FGG+PG+VT+ G   G   ++ L++SP       R I +S
Sbjct: 168 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISES 227

Query: 65  SW 66
             
Sbjct: 228 GV 229


>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
           5061]}
          Length = 517

 Score = 42.1 bits (97), Expect = 8e-07
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query: 6   ANYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVM 56
            N GL+DQ  AL WV+Q I  FGGDP ++ + G   GA  + + + +    
Sbjct: 155 LNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGK 205


>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 542

 Score = 40.5 bits (93), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%)

Query: 7   NYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLM 50
           N GL+DQ  AL WVQ+NIA FGGDP +VT+ G   GAA +   +
Sbjct: 170 NVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHI 213


>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
           (Torpedo californica) [TaxId: 7787]}
          Length = 532

 Score = 39.3 bits (90), Expect = 7e-06
 Identities = 23/51 (45%), Positives = 28/51 (54%)

Query: 7   NYGLMDQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVMP 57
           N GL+DQ  AL WV  NI  FGGDP  VT+ G   G A +   ++SP    
Sbjct: 164 NVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRD 214


>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
           1831]}
          Length = 317

 Score = 24.8 bits (52), Expect = 0.93
 Identities = 5/36 (13%), Positives = 12/36 (33%)

Query: 18  HWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISP 53
            ++  +    G DP  + + G   G       ++  
Sbjct: 137 LYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKA 172


>d1musa_ c.55.3.4 (A:) Transposase inhibitor (Tn5 transposase)
           {Escherichia coli [TaxId: 562]}
          Length = 474

 Score = 23.5 bits (50), Expect = 2.4
 Identities = 6/32 (18%), Positives = 9/32 (28%), Gaps = 8/32 (25%)

Query: 13  QIAALHWVQQNIALFGG--------DPGNVTM 36
           +  +L W    IA  GG              +
Sbjct: 415 KAGSLQWAYMAIARLGGFMDSKRTGIASWGAL 446


>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase
           PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
          Length = 405

 Score = 23.4 bits (49), Expect = 3.5
 Identities = 7/66 (10%), Positives = 15/66 (22%), Gaps = 11/66 (16%)

Query: 12  DQIAALHWVQQNIALF-----------GGDPGNVTMMGHGTGAACINFLMISPTVMPDRI 60
              A + W+      +               G V M G             +     + I
Sbjct: 164 SMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELI 223

Query: 61  IDQSSW 66
           + ++  
Sbjct: 224 LAEAGI 229


>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa
           acuminata), 1,3-beta-glucanase [TaxId: 4641]}
          Length = 312

 Score = 22.6 bits (48), Expect = 5.9
 Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 12  DQIAALHWVQQNIALFGGDPGNVTMMGHGTGAACINFLMISPTVMPDRIIDQSSWLQ 68
           +  AA  W+++N+  +     +V+      G   I    ++  ++P      ++   
Sbjct: 65  NPSAAGDWIRRNVVAY---WPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSS 118


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0393    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 271,235
Number of extensions: 9438
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 11
Length of query: 69
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 32
Effective length of database: 1,899,586
Effective search space: 60786752
Effective search space used: 60786752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.8 bits)