RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4014
(85 letters)
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 46.6 bits (109), Expect = 3e-08
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
Query: 16 QKYPVLIYIHGESFEWNSGNP--------YDGRILASYADFVVITLNYRLGV 59
PV+I+I+G +F + YDG +A+ + +V+T NYR+G
Sbjct: 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP 147
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 38.6 bits (88), Expect = 2e-05
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 16 QKYPVLIYIHGESFEWNSGNP--YDGRILASYADFVVITLNYRLGVL 60
P+LI+I+G F S Y+ I+A+ + +V + YR+G
Sbjct: 137 NGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAF 183
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 38.2 bits (87), Expect = 3e-05
Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 17 KYPVLIYIHGESFEWNSGNPYDGRILASYA-----DFVVITLNYRLG 58
PV+++I G FE S + + + + + + +NYR+
Sbjct: 113 NLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVA 159
>d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 263
Score = 35.6 bits (80), Expect = 2e-04
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Query: 16 QKYPVLIYIHGESFEWNSGNPYDGRILASY-------ADFVVITLNYR 56
+IYIHG ++ P D LA+ + ++ YR
Sbjct: 29 NTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYR 76
>d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 311
Score = 34.7 bits (78), Expect = 5e-04
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 13 QPLQKYPVLIYIHGESFEWNSGNPYDGRIL--ASYADFVVITLNYRLG 58
Q PVL+Y HG F S +D A ++ V++++YRL
Sbjct: 74 QQKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLA 121
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 34.7 bits (78), Expect = 5e-04
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 14 PLQKYPVLIYIHGESFEWNSGNP--YDGRILASYADFVVITLNYRLGVLVDITL 65
P PVLI+I+G F + + YDGR LA V++++NYR+G + L
Sbjct: 108 PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLAL 161
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like
protein 6, DPP6, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 32.0 bits (71), Expect = 0.004
Identities = 6/43 (13%), Positives = 12/43 (27%), Gaps = 4/43 (9%)
Query: 4 YPRDFGKVGQPLQKYPVLIYIHGESFEWNSGNPYDGRILASYA 46
P F YP+L+ + G + ++
Sbjct: 21 KPATF----TDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMV 59
>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 258
Score = 32.1 bits (71), Expect = 0.004
Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Query: 4 YPRDFGKVGQPLQKYPVLIYIHGESFEWNSGNPYDGRI---LASYADFVVITLNYR 56
P F +KYP+L+ ++ + + LAS + +V + + R
Sbjct: 22 LPPHF----DKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGR 73
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 31.7 bits (70), Expect = 0.006
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 17 KYPVLIYIHGESFEWNSGNPYDGRIL--ASYADFVVITLNYRLG 58
K PV ++I G + NS Y+G + AS V +T NYR+G
Sbjct: 96 KLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVG 139
>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin
hydrolase IroE {Escherichia coli [TaxId: 562]}
Length = 265
Score = 30.0 bits (66), Expect = 0.020
Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Query: 4 YPRDFGKVGQPLQKYPVLIYIHGESFEWNSGNPYDGRILASYADFVVITLNYR 56
P P YP+L + G + + ++ V++ + Y+
Sbjct: 33 VPNTT----APASGYPILYMLDGNAVMDRLDDELLKQLSEKTP-PVIVAVGYQ 80
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 30.1 bits (66), Expect = 0.026
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 16 QKYPVLIYIHGESFEWNSGN--PYDGRILASYADFVVITLNYRLGV 59
+ V+++I+G F S Y+G+ LA + V+++L+YR+G
Sbjct: 104 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGA 149
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 28.5 bits (62), Expect = 0.080
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 14 PLQKYPVLIYIHGESFEWNSGN--PYDGRILASYADFVVITLNYRLGVL 60
P Q PV+++IHG +F +G+ YDG LA+ + +V+TLNYRLG
Sbjct: 92 PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPF 140
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 280
Score = 27.5 bits (59), Expect = 0.18
Identities = 3/23 (13%), Positives = 9/23 (39%), Gaps = 4/23 (17%)
Query: 4 YPRDFGKVGQPLQKYPVLIYIHG 26
+ + + +P +Y +G
Sbjct: 26 HKKGI----KLDGSHPAFLYGYG 44
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 27.5 bits (59), Expect = 0.19
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 17 KYPVLIYIHGESFEWNSGNPYDG 39
PVL++IHG F + D
Sbjct: 77 PVPVLLWIHGGGFAIGTAESSDP 99
>d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId:
1905]}
Length = 260
Score = 26.9 bits (58), Expect = 0.27
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 7/53 (13%)
Query: 4 YPRDFGKVGQPLQKYPVLIYIHGESFEWNSGNPYDGRILASYADFVVITLNYR 56
YP + ++ G + S + G LAS FVV T++
Sbjct: 43 YPTSTAD-----GTFGAVVISPG-FTAYQSSIAWLGPRLASQ-GFVVFTIDTN 88
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 26.7 bits (57), Expect = 0.34
Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 8/46 (17%)
Query: 14 PLQKYPVLIYIHGESFEWNSGNPYDGRILASY---ADFVVITLNYR 56
P +L+ +HG G+ L F+++ +
Sbjct: 20 PEAPKALLLALHG-----LQGSKEHILALLPGYAERGFLLLAFDAP 60
>d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal
domain {Rhodococcus sp. mb1 [TaxId: 51612]}
Length = 347
Score = 26.3 bits (56), Expect = 0.47
Identities = 4/42 (9%), Positives = 10/42 (23%), Gaps = 2/42 (4%)
Query: 16 QKYPVLIYIHGESFEWNSGNPYDGRILASYAD--FVVITLNY 55
PVL+ + + + V+ +
Sbjct: 29 GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDT 70
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 26.1 bits (56), Expect = 0.57
Identities = 6/42 (14%), Positives = 11/42 (26%), Gaps = 1/42 (2%)
Query: 11 VGQPLQKYPVLIYIHGE-SFEWNSGNPYDGRILASYADFVVI 51
P L + G + + SG + Y +
Sbjct: 27 FQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLS 68
>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic
domain {Shigella flexneri 2a str. 2457T [TaxId:
198215]}
Length = 246
Score = 25.7 bits (55), Expect = 0.65
Identities = 4/41 (9%), Positives = 12/41 (29%), Gaps = 1/41 (2%)
Query: 12 GQPLQKYPVLIYIHGES-FEWNSGNPYDGRILASYADFVVI 51
++ P+ + + GE + P + +
Sbjct: 38 DVTAEERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAV 78
>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the
cellulosomal xylanase y {Clostridium thermocellum
[TaxId: 1515]}
Length = 273
Score = 25.5 bits (54), Expect = 0.75
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 13 QPLQKYPVLIYIHGESFEWNSGNPYDGRI 41
P +KY + +HG N+ D ++
Sbjct: 50 DPNKKYNIFYLMHGGGENENTIFSNDVKL 78
>d1smyc_ e.29.1.1 (C:) RNA-polymerase beta {Thermus thermophilus
[TaxId: 274]}
Length = 1119
Score = 25.9 bits (56), Expect = 0.77
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 39/110 (35%)
Query: 6 RDFGKVGQPLQKYPVLIYIHGESFEW------------NSG--------------NPYDG 39
+ FG++ + + P L I ES+ N G + G
Sbjct: 4 KRFGRIREVIP-LPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEEDKGKG 62
Query: 40 RILASYADFVVIT------------LNYRLGVLVDITLKRKKTKKKKKKK 77
++ + ++ + L Y+ + + L K T K+ +
Sbjct: 63 GLVLDFLEYRLGEPPFPQDECREKDLTYQAPLYARLQLIHKDTGLIKEDE 112
>d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 299
Score = 25.6 bits (55), Expect = 0.91
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 5 PRDFGKVGQPLQKYPVLIYIHG 26
+ + ++ P + Y+ G
Sbjct: 36 KHYYAQDFPRNKRIPTVFYLSG 57
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 85
Score = 24.7 bits (54), Expect = 1.0
Identities = 4/16 (25%), Positives = 6/16 (37%)
Query: 66 KRKKTKKKKKKKKKKI 81
+ +K KKK
Sbjct: 2 SSGSSGRKPPPKKKMT 17
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 25.3 bits (53), Expect = 1.2
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 19 PVLIYIHGESFEWNSGNPYDGRILASYADFVVITLNY 55
P ++ +HG ++ + + I +F V+ +
Sbjct: 27 PAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDL 63
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme,
C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 260
Score = 24.8 bits (52), Expect = 1.7
Identities = 3/10 (30%), Positives = 6/10 (60%)
Query: 17 KYPVLIYIHG 26
P ++ +HG
Sbjct: 38 PGPTVVLVHG 47
>d2a1fa1 c.73.1.3 (A:2-237) Uridylate kinase PyrH {Haemophilus
influenzae [TaxId: 727]}
Length = 236
Score = 23.0 bits (48), Expect = 6.0
Identities = 13/66 (19%), Positives = 23/66 (34%)
Query: 20 VLIYIHGESFEWNSGNPYDGRILASYADFVVITLNYRLGVLVDITLKRKKTKKKKKKKKK 79
+L+ + GE+ + G D IL A + + + V V + K K
Sbjct: 8 ILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGM 67
Query: 80 KILSQD 85
+ D
Sbjct: 68 NRVVGD 73
>d1v3ya_ d.167.1.1 (A:) Peptide deformylase {Thermus thermophilus
[TaxId: 274]}
Length = 182
Score = 22.8 bits (48), Expect = 6.9
Identities = 2/17 (11%), Positives = 7/17 (41%)
Query: 65 LKRKKTKKKKKKKKKKI 81
KR+ + + + +
Sbjct: 162 PKREAFLEANRAELVRF 178
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha, AccA {Escherichia coli
[TaxId: 562]}
Length = 316
Score = 22.7 bits (48), Expect = 8.6
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 61 VDITLKRKKTKKKKKKKKKKILSQ 84
++I + + ++K + +KI +
Sbjct: 31 INIDEEVHRLREKSVELTRKIFAD 54
>d2hkja2 d.14.1.3 (A:307-470) Topoisomerase VI-B subunit {Archaeon
Sulfolobus shibatae [TaxId: 2286]}
Length = 164
Score = 22.4 bits (48), Expect = 9.0
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 10 KVGQPLQKYPVLIYIHGESFEWNSGNPYDGRILASYADFVVITLNYRLGVL-VDITLKRK 68
+ +Y +++ +H S + PY S A+ I + ++ V LK+
Sbjct: 95 GIESD--QYQMVVMVHLCS----TKIPYKSAGKESIAEVEDIEKEIKNALMEVARKLKQY 148
Query: 69 -KTKKKKKKKKKKILS 83
K+K+++ KKK+L+
Sbjct: 149 LSEKRKEQEAKKKLLA 164
>d2hgaa1 b.36.1.6 (A:23-125) Uncharacterized protein MTH1368
{Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 103
Score = 22.2 bits (47), Expect = 9.6
Identities = 4/32 (12%), Positives = 13/32 (40%)
Query: 37 YDGRILASYADFVVITLNYRLGVLVDITLKRK 68
+G ++ + +G +++IT +
Sbjct: 29 INGMPTSNLTTYSAALKTISVGEVINITTDQG 60
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 411
Score = 22.4 bits (47), Expect = 9.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 66 KRKKTKKKKKKKKKKILSQD 85
K +K+K+ +K LS+D
Sbjct: 56 KSLASKRKEDLQKITFLSRD 75
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.140 0.412
Gapped
Lambda K H
0.267 0.0447 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 347,725
Number of extensions: 15512
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 53
Length of query: 85
Length of database: 2,407,596
Length adjustment: 50
Effective length of query: 35
Effective length of database: 1,721,096
Effective search space: 60238360
Effective search space used: 60238360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.6 bits)