RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy4017
         (136 letters)



>gnl|CDD|146171 pfam03392, OS-D, Insect pheromone-binding family, A10/OS-D. 
          Length = 95

 Score =  163 bits (414), Expect = 2e-53
 Identities = 61/95 (64%), Positives = 77/95 (81%)

Query: 27  YTTKYDNVDLDQILKNDRLFNNYYNCLLDKGKCSPDGQELKNKLPDAIATECKSCSEKQK 86
           YTTKYDN+DLD+IL NDRL  NY  CLLDKG C+P+G+ELK  LPDA+ T+C  C+EKQK
Sbjct: 1   YTTKYDNIDLDEILNNDRLLKNYVKCLLDKGPCTPEGKELKKVLPDALETDCAKCTEKQK 60

Query: 87  EGSKKIFKYLIDNKPEQWAELEKKFDPNGTYKAKY 121
           EG++K+ K+LI+NKPE+W EL  K+DP G Y+ KY
Sbjct: 61  EGARKVIKFLIENKPEEWKELVAKYDPEGEYRKKY 95


>gnl|CDD|217559 pfam03441, FAD_binding_7, FAD binding domain of DNA photolyase. 
          Length = 276

 Score = 28.4 bits (64), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 109 KKFDPNGTYKAKYQKELSDL 128
            KFDPNG Y  ++  EL+ L
Sbjct: 210 DKFDPNGEYIRRWVPELAGL 229


>gnl|CDD|178359 PLN02759, PLN02759, Formate--tetrahydrofolate ligase.
          Length = 637

 Score = 28.2 bits (63), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 107 LEKKFDPNGTYKAKYQKELSDLKAGKP 133
           L  ++D  G YKAK    + D  AG P
Sbjct: 41  LPDEYDLYGKYKAKVLLSVRDRLAGAP 67


>gnl|CDD|223492 COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication,
           recombination, and repair].
          Length = 461

 Score = 27.3 bits (61), Expect = 3.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 109 KKFDPNGTYKAKYQKELSDLKA 130
           +KFDP+G +  ++  EL +L  
Sbjct: 400 EKFDPDGEFIRRWVPELRNLPD 421


>gnl|CDD|215500 PLN02926, PLN02926, histidinol dehydrogenase.
          Length = 431

 Score = 27.1 bits (60), Expect = 3.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 17 LVAGKPAGEKYTTKYDNVDLDQILKN 42
             G  A ++YT+K+D V LD +++ 
Sbjct: 42 RSRGDAAVKEYTSKFDKVALDSVVER 67


>gnl|CDD|235463 PRK05434, PRK05434, phosphoglyceromutase; Provisional.
          Length = 507

 Score = 25.8 bits (58), Expect = 8.9
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 9/28 (32%)

Query: 43 DRLFNNYYNCLLDKGKCS------PDGQ 64
          DRL+ NY + LL     S      PDGQ
Sbjct: 35 DRLWANYPHTLL---SASGLAVGLPDGQ 59


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.314    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0677    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 6,874,291
Number of extensions: 601267
Number of successful extensions: 568
Number of sequences better than 10.0: 1
Number of HSP's gapped: 568
Number of HSP's successfully gapped: 24
Length of query: 136
Length of database: 10,937,602
Length adjustment: 87
Effective length of query: 49
Effective length of database: 7,078,804
Effective search space: 346861396
Effective search space used: 346861396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (24.7 bits)