Diaphorina citri psyllid: psy401


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MSTNTAAAPTATSSEVMDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQMLGRKLRGILYF
ccccccccccccccccccccccccccccccccccccEEEEEEccEEEHHHHHHHHHccccccccEEEEEEEEEEEccEEEEEEEEEEccccccccEEEcHHHHHHHHHHHHHccccccEEEEEccccccccccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEEEcccccccEEEEEccEEEEEHHHHHHHHHHHHHcccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccc
**********************************GSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARM*********LVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQMLGRKLRGILYF
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSTNTAAAPTATSSEVMDVDDTPAGKSVMAKGVTGSIHVSLHPLVIMNISEHYTRRRAQEGKPVQVIGALIGIQVGRKLEIKNSFELVYNIIEDEMIINRDYYTLKEEQFKQVFCDLDFLGWYTTGDTVNELDIKVHKQICEINESPIFLKLNPHPIHSNLPVSVYESIIDLVGGEATMLFIELPYTIITEEAERMGVDHVARMSNNDSGESSLVAEHLTAQYNAIKMLHVRIKILLDYLKEVESGTLPVNHDILRELNALRHRLPVLDNPAFKTDFYTQCNDVALITYLGTITKGCNDLNQFVNKFNVLFDKQMLGRKLRGILYF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
COP9 signalosome complex subunit 6 Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Has some glucocorticoid receptor-responsive activity.very confidentQ7L5N1
COP9 signalosome complex subunit 6 Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in oogenesis and embryogenesis and is required for proper photoreceptor R cell differentiation and promote lamina glial cell migration or axon targeting. It also promotes Ubl-dependent degradation of cyclin E (CycE) during early oogenesis.very confidentQ9VCY3
COP9 signalosome complex subunit 6 Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Has some glucocorticoid receptor-responsive activity.very confidentO88545

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008180 [CC]signalosomeconfidentGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0010388 [BP]cullin deneddylationconfidentGO:0071704, GO:0044267, GO:0044260, GO:0044238, GO:0000338, GO:0009987, GO:0070647, GO:0070646, GO:0006464, GO:0043170, GO:0019538, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0009953 [BP]dorsal/ventral pattern formationprobableGO:0032502, GO:0007389, GO:0032501, GO:0044707, GO:0008150, GO:0003002, GO:0007275, GO:0044699
GO:0060026 [BP]convergent extensionprobableGO:0032502, GO:0002009, GO:0048856, GO:0060429, GO:0009888, GO:0044767, GO:0008150, GO:0048729, GO:0009653, GO:0044699
GO:0046331 [BP]lateral inhibitionprobableGO:0032502, GO:0044700, GO:0045165, GO:0048869, GO:0030154, GO:0045168, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0009987, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050821 [BP]protein stabilizationprobableGO:0019222, GO:0060255, GO:0010608, GO:0031647, GO:0050789, GO:0065007, GO:0008150, GO:0065008, GO:0010468
GO:0021551 [BP]central nervous system morphogenesisprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699, GO:0007417
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0007420 [BP]brain developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0007095 [BP]mitotic G2 DNA damage checkpointprobableGO:0010948, GO:0044773, GO:1901991, GO:1901990, GO:0050789, GO:0044699, GO:0051716, GO:0031572, GO:0031570, GO:0010564, GO:0065007, GO:0007049, GO:0048519, GO:0009987, GO:0007346, GO:0050794, GO:0006974, GO:1901987, GO:0006950, GO:0008150, GO:0044774, GO:1901988, GO:0000077, GO:0000075, GO:0051726, GO:0050896, GO:0044763, GO:0033554, GO:0022402, GO:0048523, GO:0007093
GO:0005838 [CC]proteasome regulatory particleprobableGO:0043234, GO:0032991, GO:0022624, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0000502
GO:0019048 [BP]virus-host interactionprobableGO:0044419, GO:0044703, GO:0000003, GO:0009987, GO:0022415, GO:0022414, GO:0044764, GO:0008150, GO:0016032, GO:0044403, GO:0051701, GO:0051704
GO:0010387 [BP]signalosome assemblyprobableGO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0034622, GO:0043623, GO:0071840
GO:0071541 [CC]eukaryotic translation initiation factor 3 complex, eIF3mprobableGO:0043234, GO:0005737, GO:0005852, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0032991
GO:0071540 [CC]eukaryotic translation initiation factor 3 complex, eIF3eprobableGO:0043234, GO:0005737, GO:0005852, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0032991
GO:0006511 [BP]ubiquitin-dependent protein catabolic processprobableGO:0051603, GO:1901575, GO:0044265, GO:0044260, GO:0044267, GO:0019538, GO:0009056, GO:0009987, GO:0019941, GO:0044237, GO:0043170, GO:0044248, GO:0071704, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0006508, GO:0043632, GO:0044238, GO:0009057
GO:0016282 [CC]eukaryotic 43S preinitiation complexprobableGO:0005737, GO:0032991, GO:0044464, GO:0070993, GO:0005623, GO:0030529, GO:0005575, GO:0044444, GO:0044424, GO:0005622
GO:0005635 [CC]nuclear envelopeprobableGO:0005575, GO:0005623, GO:0005634, GO:0044464, GO:0031967, GO:0031975, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0042221 [BP]response to chemical stimulusprobableGO:0050896, GO:0008150

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4E0Q, chain A
Confidence level:very confident
Coverage over the Query: 36-168
View the alignment between query and template
View the model in PyMOL
Template: 2O95, chain A
Confidence level:very confident
Coverage over the Query: 34-208
View the alignment between query and template
View the model in PyMOL
Template: 4B4T, chain U
Confidence level:very confident
Coverage over the Query: 35-243
View the alignment between query and template
View the model in PyMOL