BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4020
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O43747|AP1G1_HUMAN AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5
Length = 822
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/366 (65%), Positives = 280/366 (76%), Gaps = 54/366 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YPAHFGQLECLKLIAS +FTDKRIGYLGAMLLLDERQDVHLL+TN +KNDLN STQFV G
Sbjct: 61 YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQG 120
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
LALCTLG + S EM RDLA EVE+L+K+SN+Y+RKKAALCA +I KVPELME+FLPAT+
Sbjct: 121 LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK 180
Query: 141 LLLSDKNHAI--------------------------------------------HQV--- 153
LL++KNH + H V
Sbjct: 181 NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGI 240
Query: 154 -------KILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIK 206
+IL+LLRILG+ND ++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIK
Sbjct: 241 SDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIK 300
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
SESGLRVLA+NILGRFLLNNDKNIRYVAL +LL+TV D +AVQRHR+TI++CLKD DVS
Sbjct: 301 SESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVS 360
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLD 326
I+RRA+ELSFALVN N+R MMKELL FL+ EP+FKA C+S I L AE++AP+KRWH+D
Sbjct: 361 IKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID 420
Query: 327 TLLKVL 332
T+++VL
Sbjct: 421 TIMRVL 426
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 422 SVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPP 481
S+ AY +G+ I + SVT++T+QA+N ++DF+FQAAVPKTFQLQ+L P
Sbjct: 706 SITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSP 765
Query: 482 SDTNIPPGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S + +P + T T +V K N + LRMRIK++YN G+ +QD AE+
Sbjct: 766 SSSIVPAFNTGTIT-QVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEV 813
>sp|P22892|AP1G1_MOUSE AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3
Length = 822
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 239/366 (65%), Positives = 280/366 (76%), Gaps = 54/366 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YPAHFGQLECLKLIAS +FTDKRIGYLGAMLLLDERQDVHLL+TN +KNDLN STQFV G
Sbjct: 61 YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQG 120
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
LALCTLG + S EM RDLA EVE+L+K+SN+Y+RKKAALCA +I KVPELME+FLPAT+
Sbjct: 121 LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK 180
Query: 141 LLLSDKNHAI--------------------------------------------HQV--- 153
LL++KNH + H V
Sbjct: 181 NLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGI 240
Query: 154 -------KILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIK 206
+IL+LLRILG+ND ++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIK
Sbjct: 241 SDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIK 300
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
SESGLRVLA+NILGRFLLNNDKNIRYVAL +LL+TV D +AVQRHR+TI++CLKD DVS
Sbjct: 301 SESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVS 360
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLD 326
I+RRA+ELSFALVN N+R MMKELL FL+ EP+FKA C+S I L AE++AP+KRWH+D
Sbjct: 361 IKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID 420
Query: 327 TLLKVL 332
T+++VL
Sbjct: 421 TIMRVL 426
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 422 SVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPP 481
S+ AY +G+ I + SVT++T+QA+N ++DF+FQAAVPKTFQLQ+L P
Sbjct: 706 SITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSP 765
Query: 482 SDTNIPPGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S + +P + T T +V K N + LRMRIK++YN G+ +QD AE+
Sbjct: 766 SSSVVPAFNTGTIT-QVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEV 813
>sp|Q5R5M2|AP1G1_PONAB AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1
Length = 822
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/366 (65%), Positives = 279/366 (76%), Gaps = 54/366 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YPAHFGQLECLKLIAS +FTDKRIGYLGAMLLLDERQDVHLL+TN +KNDLN STQFV G
Sbjct: 61 YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQG 120
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
LALCTLG + S EM RDLA EVE+L+K+SN+Y+RKKAALCA +I KVPELME+FLPAT+
Sbjct: 121 LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK 180
Query: 141 LLLSDKNHAI--------------------------------------------HQV--- 153
LL++KNH + H V
Sbjct: 181 NLLNEKNHGVLHTSVVLLTEMCERSPDMPAHFRKLVPQLVRILKNLIMSGYSPEHDVSGI 240
Query: 154 -------KILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIK 206
+IL+LLRILG+ND ++SEAMNDILAQVATNTETSKNVGN ILYETVL+IMDIK
Sbjct: 241 SDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIK 300
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
SESGLRVLA+NILGRFLLNNDKNIRYVAL +LL+TV D + VQRHR+TI++CLKD DVS
Sbjct: 301 SESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVRTDHNTVQRHRSTIVDCLKDLDVS 360
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLD 326
I+RRA+ELSFALVN N+R MMKELL FL+ EP+FKA C+S I L AE++AP+KRWH+D
Sbjct: 361 IKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHID 420
Query: 327 TLLKVL 332
T+++VL
Sbjct: 421 TIMRVL 426
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 422 SVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPP 481
S+ AY +G+ I + SVT++T+QA+N ++DF+FQAAVPKTFQLQ+L P
Sbjct: 706 SITAYSKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSP 765
Query: 482 SDTNIPPGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S + +P + T T +V K N + LRMRIK++YN G+ +QD AE+
Sbjct: 766 SSSIVPAFNTGTIT-QVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEV 813
>sp|O75843|AP1G2_HUMAN AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1
SV=1
Length = 785
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/386 (56%), Positives = 260/386 (67%), Gaps = 62/386 (16%)
Query: 9 NDAVERDTYLPK--------YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVH 60
D V R L K YPAHFGQ+ECLKLIASSRFTDKR+GYLGAMLLLDER D H
Sbjct: 42 GDPVHRHRQLAKLLYVHMLGYPAHFGQMECLKLIASSRFTDKRVGYLGAMLLLDERHDAH 101
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
LLITNS+KNDL+ Q V GLALCTL + S EM RDLA EVE+L+ + Y+RKKA L
Sbjct: 102 LLITNSIKNDLSQGIQPVQGLALCTLSTMGSAEMCRDLAPEVEKLLLQPSPYVRKKAILT 161
Query: 121 AYRIILKVPELMEIFLPATRLLLSDKN--------------------------------- 147
A +I KVPEL +FLP LL +++
Sbjct: 162 AVHMIRKVPELSSVFLPPCAQLLHERHHGILLGTITLITELCERSPAALRHFRKVVPQLV 221
Query: 148 --------------HAIH-------QVKILKLLRILGKNDVEASEAMNDILAQVATNTET 186
H+I QV+IL+LLRILG+N E+SE MND+LAQVATNT+T
Sbjct: 222 HILRTLVTMGYSTEHSISGVSDPFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTDT 281
Query: 187 SKNVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDT 246
S+N GN +L+ETVL+IMDI+S +GLRVLAVNILGRFLLN+D+NIRYVAL +LLR V D
Sbjct: 282 SRNAGNAVLFETVLTIMDIRSAAGLRVLAVNILGRFLLNSDRNIRYVALTSLLRLVQSDH 341
Query: 247 SAVQRHRNTILECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHC 306
SAVQRHR T++ECL++ D S+ RRALELS ALVNS+NVR+MM+EL FLE PD +A C
Sbjct: 342 SAVQRHRPTVVECLRETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCPPDLRADC 401
Query: 307 SSNIVLCAERFAPNKRWHLDTLLKVL 332
+S I+L AERFAP KRWH+DT+L VL
Sbjct: 402 ASGILLAAERFAPTKRWHIDTILHVL 427
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 423 VKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPPS 482
+K ++ GV +NL ++ ++T+ ATN + V+ F+ QAAVPK+ QLQ+ PS
Sbjct: 670 LKVFEREGVQLNLSFIRPPENPALLLITITATNFSEGDVTHFICQAAVPKSLQLQLQAPS 729
Query: 483 DTNIPP--GSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
+P G +TQ R+ N +A LR++++++Y+ +Q+ E+
Sbjct: 730 GNTVPARGGLPITQLFRILNPN---KAPLRLKLRLTYDHFHQSVQEIFEV 776
>sp|O88512|AP1G2_MOUSE AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2
SV=2
Length = 791
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/366 (57%), Positives = 252/366 (68%), Gaps = 54/366 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YPAHFGQ+ECLKLIAS RFTDKR+GYLGAMLLLDER D HLLITNS+KNDL+ Q V G
Sbjct: 62 YPAHFGQMECLKLIASPRFTDKRVGYLGAMLLLDERHDSHLLITNSIKNDLSQGNQPVQG 121
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
LALCTL + S EM RDLA EVE+L+ + Y+RKKA L A +I K PEL IFLP
Sbjct: 122 LALCTLSTMGSAEMCRDLAPEVEKLLLQPSPYVRKKAILTAVHMIRKDPELSGIFLPPCT 181
Query: 141 LLLSDKN-----------------------------------------------HAIH-- 151
LL +++ H+I
Sbjct: 182 KLLRERHHGIQLGTVTLITELCERNPAALRHFRKVVPQLVQILRTLVTTGYSTEHSISGV 241
Query: 152 -----QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIK 206
QV+IL+LLRILG+N E+SE MND+LAQVATNT+TS+N GN +L ETVL+IM I
Sbjct: 242 SDPFLQVQILRLLRILGRNHEESSETMNDLLAQVATNTDTSRNAGNAVLLETVLTIMAIH 301
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
S +GLRVLAVNILGRFLLNNDKNIRYVAL +LL+ V D SAVQRHR+T++ECL++ D S
Sbjct: 302 SAAGLRVLAVNILGRFLLNNDKNIRYVALTSLLQLVQSDHSAVQRHRSTVVECLQETDAS 361
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLD 326
+ RRALELS ALVNS+NVR+MM+EL FLE PD +A C+S I+L AERFAP+KRWH+D
Sbjct: 362 LSRRALELSLALVNSSNVRAMMQELQAFLESCPPDLRADCASGILLAAERFAPSKRWHID 421
Query: 327 TLLKVL 332
T+L VL
Sbjct: 422 TILHVL 427
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 422 SVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPP 481
SV+ ++ G+ ++L ++ +VT TN + V+ F+ QAAVPK+FQLQ+ P
Sbjct: 675 SVRVFEREGLQLDLSFMRPLETPALLLVTATTTNSSKEDVTHFVCQAAVPKSFQLQLQAP 734
Query: 482 SDTNIPP--GSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S IP G +TQ R+ N QA LR++++++YN +G +Q+ E+
Sbjct: 735 SGNTIPAQGGLPITQVFRILNPN---QAPLRLKLRLTYNHSGQPVQEIFEV 782
>sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1
PE=1 SV=1
Length = 895
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/366 (52%), Positives = 251/366 (68%), Gaps = 54/366 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YP FGQ+ECLKLI S + DKRIGYLG MLLLDE+Q+V LL TN ++ D+ +S QF+VG
Sbjct: 59 YPTQFGQMECLKLIVSPSYADKRIGYLGLMLLLDEKQEVLLLATNCIRGDIMNSNQFIVG 118
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
++LC G I S M+RD++ E+E+++ SN YIRKKAALCA R++ KVP+L E ++P +
Sbjct: 119 VSLCAFGNICSTAMARDISPEIEKVISHSNPYIRKKAALCAIRVLRKVPDLTENYIPKIK 178
Query: 141 LLLSDKNHA--------------------IH----------------------------- 151
LLS++NHA IH
Sbjct: 179 ALLSERNHAVILTALTLIIEICEMDSTQIIHFKKMVPQLVRILKSLTSSGYLPEHDIGGV 238
Query: 152 -----QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIK 206
QVKIL+LLRILG+ND EAS+AMNDILAQV+TNT+++KNVGN ILYE V +IM I+
Sbjct: 239 TDPFLQVKILRLLRILGQNDPEASDAMNDILAQVSTNTDSTKNVGNAILYECVQTIMTIE 298
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
SE+GL+V+A+NILGRFLLN D NIRYVALNTL R V D AVQRHRNTI+ECLKDPDVS
Sbjct: 299 SENGLKVMAINILGRFLLNRDNNIRYVALNTLSRVVNTDIQAVQRHRNTIVECLKDPDVS 358
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLD 326
IR RAL+L ++LV +N+R +++ELL FL ++ FK+ + + + E++APNKRW +D
Sbjct: 359 IRCRALDLIYSLVTESNIRVLVRELLNFLLIADAQFKSELVAKLCIVTEKYAPNKRWQID 418
Query: 327 TLLKVL 332
T+L+V+
Sbjct: 419 TILRVM 424
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 426 YDNHGVVINLLLDSQTPGD-SVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPPSDT 484
Y HG+ I+ P + S+T + M TN + +++F QAAVPK ++Q+L PS T
Sbjct: 783 YQKHGLNISYECSKPQPNNLSLTNINMVITNTGSSPITNFSLQAAVPKYLKIQLLAPSST 842
Query: 485 NIPP--GSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQD 526
IPP +VTQ +V + Q + +R+K+ + +NG D
Sbjct: 843 VIPPNNSGEVTQVSKVLNSQQG-QKPILLRLKLDFQINGQPFSD 885
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/370 (53%), Positives = 254/370 (68%), Gaps = 54/370 (14%)
Query: 17 YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQ 76
++ YPAHFGQ+ECLKL+A+ RFTDKR+GYLG MLLLDE +V L+TN LKND+ S
Sbjct: 59 HMLGYPAHFGQIECLKLVATPRFTDKRLGYLGIMLLLDENTEVLTLVTNGLKNDMEHSNM 118
Query: 77 FVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAA------------------ 118
+V GLALCT IAS EMSRDL +E+E+LM SSN YIR+KAA
Sbjct: 119 YVCGLALCTFANIASEEMSRDLCNEIEKLMGSSNTYIRRKAAICAMRIVRKVPDLIDHFV 178
Query: 119 ---------------LCAYRIILKV----PELMEIFLPATRLLLS----------DKNHA 149
LCA + +++ E + ++ A LL+ H
Sbjct: 179 DRTQQLLSDKNHGVLLCAVTLAIEICRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHD 238
Query: 150 IH-------QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSI 202
+ QVKIL+LLRILGK + +ASE MNDILAQVATNTE SKNVGN+ILYETVL+I
Sbjct: 239 VSGITDPFLQVKILRLLRILGKENAQASETMNDILAQVATNTEASKNVGNSILYETVLTI 298
Query: 203 MDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKD 262
++I +++GLRV+A+NILG+FL N D NIRYVALNTL + V +DT+AVQRHRN IL+CL+D
Sbjct: 299 LEIDADNGLRVMAINILGKFLSNRDNNIRYVALNTLSKVVSMDTNAVQRHRNIILDCLRD 358
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKR 322
D+SIRRRALELS+AL+N +NVR + +ELL FLE ++ +FK ++ I L AE+FAPNKR
Sbjct: 359 GDISIRRRALELSYALINESNVRVLTRELLSFLEVADNEFKLGMTTQICLAAEKFAPNKR 418
Query: 323 WHLDTLLKVL 332
WH+DT+L+VL
Sbjct: 419 WHIDTVLRVL 428
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 347 QRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDT 406
+RRALELS+AL+N +NVR + +ELL FLE ++ +FK ++ I L AE+FAPNKRWH+DT
Sbjct: 364 RRRALELSYALINESNVRVLTRELLSFLEVADNEFKLGMTTQICLAAEKFAPNKRWHIDT 423
Query: 407 LLKVL 411
+L+VL
Sbjct: 424 VLRVL 428
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 426 YDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLPPSDTN 485
Y HG+ I L + + +T + T+ + +S+ FQAAVPKT +LQM S++
Sbjct: 748 YTKHGLTITLTPTTNPARPEIVHITARFTSAT-SAISNINFQAAVPKTHKLQMQAISNST 806
Query: 486 IPPGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAE 529
+ P S TQ LRV A++R+R+++++ V+G +QDQ +
Sbjct: 807 VHPDSTETQPLRVMVPPG---AAVRLRLRIAFQVDGHSVQDQTD 847
>sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070
PE=2 SV=2
Length = 862
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/411 (48%), Positives = 254/411 (61%), Gaps = 79/411 (19%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
YP HFGQ+ECLKLIAS F +KRIGYLG MLLLDERQ+V +L+TNSLK DLN + Q++VG
Sbjct: 64 YPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVG 123
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
LALC LG I S EM+RDLA EVERL++ + IRKKAALCA RII KVP+L E F+
Sbjct: 124 LALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCAIRIIRKVPDLSENFINPGA 183
Query: 141 LLLSDKNH-----AIH-------------------------------------------- 151
LL +K+H +H
Sbjct: 184 ALLKEKHHGVLITGVHLCTEICKVSSEALEYFRKKCTEGLVKTLRDIANSPYSPEYDVAG 243
Query: 152 ------QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
+++LKLLR+LG+ D +AS+ MNDILAQVA+ TE++KN GN ILYE V +IM I
Sbjct: 244 ITDPFLHIRLLKLLRVLGQGDADASDCMNDILAQVASKTESNKNAGNAILYECVQTIMSI 303
Query: 206 KSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDV 265
+ GLRVLA+NILG+FL N D NIRYVALN L+R++ +D+ AVQRHR TILEC+KD D
Sbjct: 304 EENGGLRVLAINILGKFLSNRDNNIRYVALNMLMRSLTVDSQAVQRHRATILECVKDSDA 363
Query: 266 SIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHL 325
SI++RALEL + LVN NV+ + KEL+ +LE SE DFK ++ I E+FAP K W++
Sbjct: 364 SIQKRALELIYLLVNENNVKPLAKELIEYLEVSEQDFKGDLTAKICSIVEKFAPEKIWYI 423
Query: 326 DTLLKVL---------------------VANLLGFSNRALRDQRRALELSF 355
D +LKVL +L G++ RAL RAL SF
Sbjct: 424 DQMLKVLSEAGTYVKEDVWHALIVVITNAPDLHGYTVRAL---YRALHTSF 471
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 347 QRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDT 406
Q+RALEL + LVN NV+ + KEL+ +LE SE DFK ++ I E+FAP K W++D
Sbjct: 366 QKRALELIYLLVNENNVKPLAKELIEYLEVSEQDFKGDLTAKICSIVEKFAPEKIWYIDQ 425
Query: 407 LLKVL 411
+LKVL
Sbjct: 426 MLKVL 430
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 415 SENKDKV--SVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLTLVSDFLFQAAVPK 472
SE+K S+ A+++ + I Q+ T + N + ++FLFQAAVPK
Sbjct: 739 SEDKSAAYPSIVAFESSSLKIEFNFTKQSENPQTTDIVANFINLTPNVYTEFLFQAAVPK 798
Query: 473 TFQLQMLPPSDTNIPPGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
QL + P S ++P + QT+RV + + + MR++V Y +NG + ++ +I
Sbjct: 799 FLQLHLDPASSNSLPANGNIKQTMRVTNSQKG-KKPIVMRMRVGYKINGKDVLEEGQI 855
>sp|Q84K16|AP1G1_ARATH AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana GN=GAMMA-ADR
PE=1 SV=1
Length = 876
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/396 (44%), Positives = 229/396 (57%), Gaps = 65/396 (16%)
Query: 2 SSIRQVIN--DAVERDTYLPK--------YPAHFGQLECLKLIASSRFTDKRIGYLGAML 51
+ IR +IN D +R L K YP HFGQ+ECLKLIAS F +KRIGYLG ML
Sbjct: 35 ADIRALINEDDPHDRHRNLAKLMFIHMLGYPTHFGQMECLKLIASPGFPEKRIGYLGLML 94
Query: 52 LLDERQDVHLLITNSLKNDLNSSTQFVVGLALCTLGAIAS-------------------- 91
LLDERQ+V +L+TNSLK DLN S Q+VVGLALC LG I S
Sbjct: 95 LLDERQEVLMLVTNSLKQDLNHSNQYVVGLALCALGNICSAEMARDLAPEVERLIQFRDP 154
Query: 92 -----------------PEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEI 134
P+++ + + L+K + + Y + E +E
Sbjct: 155 NIRKKAALCSTRIIRKVPDLAENFVNAAASLLKEKHHGVLITGVQLCYELCTINDEALEY 214
Query: 135 F-LPATRLL---LSDKNHAIHQ--------------VKILKLLRILGKNDVEASEAMNDI 176
F T L L D ++ +Q +++L+LLR+LG+ D +AS+ M DI
Sbjct: 215 FRTKCTEGLIKTLRDITNSAYQPEYDVAGITDPFLHIRLLRLLRVLGQGDADASDLMTDI 274
Query: 177 LAQVATNTETSKNVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALN 236
LAQVAT TE++KN GN +LYE V +IM I+ + LRVLA+NILGRFL N D NIRYVALN
Sbjct: 275 LAQVATKTESNKNAGNAVLYECVETIMAIEDTNSLRVLAINILGRFLSNRDNNIRYVALN 334
Query: 237 TLLRTVYIDTSAVQRHRNTILECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIFLE 296
L++ + D AVQRHR TILEC+KDPD SIR+RALEL LVN NV + KEL+ +LE
Sbjct: 335 MLMKAITFDDQAVQRHRVTILECVKDPDASIRKRALELVTLLVNENNVTQLTKELIDYLE 394
Query: 297 KSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLKVL 332
S+ DFK S+ I E+F+P K W++D +LKVL
Sbjct: 395 ISDEDFKEDLSAKICFIVEKFSPEKLWYIDQMLKVL 430
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 347 QRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDT 406
++RALEL LVN NV + KEL+ +LE S+ DFK S+ I E+F+P K W++D
Sbjct: 366 RKRALELVTLLVNENNVTQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKLWYIDQ 425
Query: 407 LLKVL 411
+LKVL
Sbjct: 426 MLKVL 430
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 423 VKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNENLT--LVSDFLFQAAVPKTFQLQMLP 480
+ AY++ + I S+TPG+ T +QAT NL+ +DF+FQAAVPK QL + P
Sbjct: 761 IVAYESSSLKIEFTF-SKTPGNLQT-TNVQATFTNLSPNTFTDFIFQAAVPKFLQLHLDP 818
Query: 481 P-SDTNIPPGS-QVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S+T + GS +TQ LRV + + SL MR+++ Y +NG + ++ ++
Sbjct: 819 ASSNTLLASGSGAITQNLRVTNSQQG-KKSLVMRMRIGYKLNGKDVLEEGQV 869
>sp|Q9UU81|AP1G1_SCHPO AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl4 PE=3 SV=1
Length = 865
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 220/434 (50%), Gaps = 69/434 (15%)
Query: 4 IRQVINDAVERDT--------YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDE 55
IRQ ND R +L P HFGQ+ECLKL++SSRF DKR+GYL AMLLLDE
Sbjct: 64 IRQGSNDMRMRRKNVAKLLYLFLLGEPTHFGQIECLKLLSSSRFMDKRLGYLAAMLLLDE 123
Query: 56 RQDVHLLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRK 115
Q+V L+TNSL+NDL S +F+VGLAL G +A PE++RDL++++ L + + YI K
Sbjct: 124 NQEVLTLLTNSLQNDLKSRDKFIVGLALSAFGNVAGPELARDLSNDIAELCSNHHNYISK 183
Query: 116 KAALCAYRIILKVPELMEIFLPATRLLLSDKNH---------AIHQVKILKLLRILGKND 166
KA LCA R+I K P+L +++ T LL K+H AI KI L + + +
Sbjct: 184 KAVLCALRVIQKEPDLESLYIEKTDELLHSKSHGVLMAALAFAISACKINPSL--ISRFE 241
Query: 167 VEASEAMNDILAQVATNTETSK-NVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLN 225
+A + + I Q++T+T +S+ N+GN S+ L+V + L N
Sbjct: 242 SQADDLIYRI-RQLSTSTYSSEHNIGNI-------------SDPFLQVKILQFLSILGQN 287
Query: 226 NDKNIRYVALNTLLRTVYIDTSAVQRHRNTIL-ECLK-----DPDVSIRRRALEL--SFA 277
N K Y ++ LL V +T + + N IL + ++ + D S+R + + F
Sbjct: 288 NPK--IYDKMSDLLAQVCTNTDSSRNAGNAILYQAVRTILDLNSDSSLRVLGVNILAKFL 345
Query: 278 LVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLKVLVANLL 337
N R + +L + SE + S I+ C +D+ +
Sbjct: 346 GNRDNNTRYVALNMLKLVVNSEENAVQRHRSTILACLN--------DVDSSI-------- 389
Query: 338 GFSNRALRDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFA 397
Q RALELS LVN ANVR M++ELL FL+ + + + I FA
Sbjct: 390 ---------QSRALELSTFLVNEANVRFMVRELLSFLDNVSDELRGSTAQYITEVTNAFA 440
Query: 398 PNKRWHLDTLLKVL 411
PNKRWH DTLL+V
Sbjct: 441 PNKRWHFDTLLRVF 454
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 415 SENKDKVSVKAYDNHGVVINLLLDSQTPGDSVTIVTMQATNEN-LTLVSDFLFQAAVPKT 473
S +K + +D H V + L+ S+ ++ + N+N +T V + AVPK+
Sbjct: 743 STSKSYPPIVVFDKHDVTLTLV-PSKEESTKTAVIEAKFKNKNPMTRVEKIHLEVAVPKS 801
Query: 474 FQLQMLPPSDTNIPPGSQVTQTLRVAKANNNVQASLRMRIKV 515
+L++ P T++ PG + +QTLRV + + Q LR+RI V
Sbjct: 802 QKLKIQPLRTTSMEPGGETSQTLRVHGPSGS-QVKLRLRISV 842
>sp|Q8LPK4|AP2A2_ARATH AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana GN=ALPHAC-AD
PE=1 SV=1
Length = 1013
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 187/376 (49%), Gaps = 64/376 (17%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
Y FG +E + LI++ ++ +K++GY+ LL+E D L N+++ND+ +
Sbjct: 64 YDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETFQC 123
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSN--AYIRKKAALCAYRIILKVPELMEIFLPA 138
LAL +G I + + LA +V++L+ SS+ +RKKAALC R+ K P+ + + A
Sbjct: 124 LALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWA 183
Query: 139 TRL--LLSDK------------------NHAIHQ---VKILKLLRILGKN---------- 165
R+ LL ++ NH + K +K+L L +N
Sbjct: 184 DRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEYTYY 243
Query: 166 ----------------------DVEASEAMNDILAQVATNTETSKNV-----GNTILYET 198
D +A+ ++L ++ T+ KNV + +L+E
Sbjct: 244 GIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVLFEA 303
Query: 199 VLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYID--TSAVQRHRNTI 256
+ +M + +E + V +LG+F+ + NIRY+ L + R + + +++H++ I
Sbjct: 304 LSLVMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQI 363
Query: 257 LECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAER 316
+ LKDPD+SIRRRAL+L + + + +N + +++ELL +L +E + S + AE+
Sbjct: 364 ITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEK 423
Query: 317 FAPNKRWHLDTLLKVL 332
FAP+ W++D +L+++
Sbjct: 424 FAPDLSWYVDVILQLI 439
>sp|Q8LPL6|AP2A1_ARATH AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR
PE=1 SV=1
Length = 1012
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 188/376 (50%), Gaps = 64/376 (17%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
Y FG +E + LI++ ++ +K++GY+ LL+E D L N+++ND+ +
Sbjct: 64 YDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETFQC 123
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSN--AYIRKKAALCAYRIILKVPELMEIFLPA 138
LAL +G I + + LA +V++L+ SS+ +RKKAALC R+ K P+ + + A
Sbjct: 124 LALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWA 183
Query: 139 TRL--LLSDKNHAI---------------HQV------KILKLLRILGKN---------- 165
R+ LL +++ + H+ K +K+L L +N
Sbjct: 184 DRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEYTYY 243
Query: 166 ----------------------DVEASEAMNDILAQVATNTETSKNV-----GNTILYET 198
D +A+ ++L ++ T+ KNV + +L+E
Sbjct: 244 GIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVLFEA 303
Query: 199 VLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYID--TSAVQRHRNTI 256
+ +M + +E + V +LG+F+ + NIRY+ L + R + + +++H++ I
Sbjct: 304 LSLVMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQI 363
Query: 257 LECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAER 316
+ LKDPD+SIRRRAL+L + + + +N + +++ELL +L +E + S + AE+
Sbjct: 364 ITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEK 423
Query: 317 FAPNKRWHLDTLLKVL 332
FAP+ W++D +L+++
Sbjct: 424 FAPDLSWYVDVILQLI 439
>sp|O14617|AP3D1_HUMAN AP-3 complex subunit delta-1 OS=Homo sapiens GN=AP3D1 PE=1 SV=1
Length = 1153
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 204/413 (49%), Gaps = 60/413 (14%)
Query: 10 DAVERDTYLP--KYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSL 67
+AV + TYL Y + ++++++S+FT KRIGYL A E DV +L TN +
Sbjct: 57 NAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQI 116
Query: 68 KNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILK 127
+ DL+S +Q+ G+AL L +P+++RDLA+++ LM + YIRKKA L Y++ LK
Sbjct: 117 RKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLK 176
Query: 128 VPELMEIFLPATRLLLSDKNHAIHQVK---ILKLLRILGKNDVEASEAMNDILAQVATN- 183
PE + P + L D + + I +L R KN + + ++ N
Sbjct: 177 YPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNW 236
Query: 184 ------------TETSKNVGN----------------TILYE---TVLSIMDIKSESGLR 212
T +G ++LYE TV++++ I SG+
Sbjct: 237 VLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVL-ISLSSGMP 295
Query: 213 ------VLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
L V L + ++D+N++Y+ L + + + +VQ H++ IL+CL D D S
Sbjct: 296 NHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSE-PDFKAHCSSNIV-LCAE---RFAPNK 321
IR RAL+L + +V+ N+ ++K+L+ ++K+E ++ + I+ +C++ ++ N
Sbjct: 356 IRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQYITNF 415
Query: 322 RWHLDTLLK-----------VLVANLLGFSNRALRDQRRALELSFALVNSANV 363
W++ L++ ++ A +L + R ++ A+ AL++SA++
Sbjct: 416 EWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRKFAVSQMSALLDSAHL 468
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 203/413 (49%), Gaps = 60/413 (14%)
Query: 10 DAVERDTYLP--KYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSL 67
+AV + TYL Y + ++++++S+FT KRIGYL A E DV +L TN +
Sbjct: 57 NAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQI 116
Query: 68 KNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILK 127
+ DL+S +Q+ G+AL L +P+++RDLA+++ LM + YIRKKA L Y++ LK
Sbjct: 117 RKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLK 176
Query: 128 VPELMEIFLPATRLLLSDKNHAIHQVK---ILKLLRILGKNDVEASEAMNDILAQVATN- 183
PE + P + L D + + I +L R KN + + ++ N
Sbjct: 177 YPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNW 236
Query: 184 ------------TETSKNVGN----------------TILYE---TVLSIMDIKSESGLR 212
T +G ++LYE TV++++ I SG+
Sbjct: 237 VLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVL-ISLSSGMP 295
Query: 213 ------VLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
L V L + ++D+N++Y+ L + + + +VQ H++ +L+CL D D S
Sbjct: 296 NHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDES 355
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSE-PDFKAHCSSNIV-LCAE---RFAPNK 321
IR RAL+L + +V+ N+ ++K+L+ ++K+E ++ + I+ +C++ + N
Sbjct: 356 IRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQSNYQHITNF 415
Query: 322 RWHLDTLLK-----------VLVANLLGFSNRALRDQRRALELSFALVNSANV 363
W++ L++ ++ A +L + R +R A+ AL++SA++
Sbjct: 416 EWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKAIRRFAVAQMSALLDSAHL 468
>sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus musculus GN=Ap3d1 PE=1 SV=1
Length = 1199
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 44/333 (13%)
Query: 10 DAVERDTYLP--KYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSL 67
+AV + TYL Y + ++++++S+FT KR+GYL A E DV +L TN +
Sbjct: 57 NAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRVGYLAASQCFHEGTDVIMLTTNQI 116
Query: 68 KNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILK 127
+ DL+S +Q+ G+AL L +P+++RDLA+++ LM + YIRKKA L Y++ LK
Sbjct: 117 RKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLK 176
Query: 128 VPELMEIFLPATRLLLSDKNHAIHQVK---ILKLLRILGKNDVEASEAMNDILAQVATN- 183
PE + P + L D + + I +L R KN + + ++ N
Sbjct: 177 YPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNW 236
Query: 184 ------------TETSKNVGN----------------TILYE---TVLSIMDIKSESGLR 212
T +G ++LYE TV++++ I SG+
Sbjct: 237 VLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVL-ISLSSGMP 295
Query: 213 ------VLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
L V L + ++D+N++Y+ L + + + +VQ H++ IL+CL D D S
Sbjct: 296 NHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSE 299
IR RAL+L + +V+ N+ ++K+L+ ++K+E
Sbjct: 356 IRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAE 388
>sp|Q12028|AP1G1_YEAST AP-1 complex subunit gamma-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL4 PE=1 SV=1
Length = 832
Score = 135 bits (340), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 101/162 (62%), Gaps = 4/162 (2%)
Query: 175 DILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVA 234
D+L ++ATNT+++KN G ILYETV +I + LRVL +NIL +FL D N +YV+
Sbjct: 299 DLLTRIATNTDSTKNSGQAILYETVKTIFSLDLNQPLRVLGINILAKFLAGKDNNTKYVS 358
Query: 235 LNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIF 294
LNTLL+ V + +AVQRHR I CL+D DVSIR RALELSFA+++ +N+ ++ EL+ F
Sbjct: 359 LNTLLKVVPQEPTAVQRHRKFISHCLQDTDVSIRMRALELSFAILDDSNLVELVNELMKF 418
Query: 295 LEKSEPDFKAHCSSNIVLCAERF----APNKRWHLDTLLKVL 332
L K + D K I + F ++ W LD +L
Sbjct: 419 LAKQDEDSKDLIIYTIDHLIDTFDTRVVKDESWKLDVFFNIL 460
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 7/156 (4%)
Query: 17 YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQ 76
Y+ HFGQ+E + LIAS F DKR+GYL A LLLDE +D+ L+TN L NDL+ +
Sbjct: 57 YILGEKTHFGQVESINLIASDDFVDKRLGYLAATLLLDESEDLLTLLTNMLNNDLHHPNK 116
Query: 77 FVVGLALCTLGAIASPEMSRDLASEVERLMKSS-NAYIRKKAALCAYRIILKVPELMEIF 135
+ V LAL +LG ++SPE++RDL +VE ++K+S + ++ KKA CA ++I K L+EIF
Sbjct: 117 YAVSLALTSLGFLSSPELARDLYPDVENIIKNSRDPFLLKKALQCAAKLIFKDVSLLEIF 176
Query: 136 -LPATRLLLSDKNHAIHQV-----KILKLLRILGKN 165
+ +LS + H V KI++ + ++G N
Sbjct: 177 NIEDITKILSSHSICTHGVLLGVTKIIQSILLIGLN 212
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 321 KRWHLDTLLKVL------VANLLGFSNRALRD-----QRRALELSFALVNSANVRSMMKE 369
K L+TLLKV+ V F + L+D + RALELSFA+++ +N+ ++ E
Sbjct: 355 KYVSLNTLLKVVPQEPTAVQRHRKFISHCLQDTDVSIRMRALELSFAILDDSNLVELVNE 414
Query: 370 LLIFLEKSEPDFKAHCSSNIVLCAERF----APNKRWHLDTLLKVLVAVS 415
L+ FL K + D K I + F ++ W LD +L V
Sbjct: 415 LMKFLAKQDEDSKDLIIYTIDHLIDTFDTRVVKDESWKLDVFFNILKLVG 464
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 49/371 (13%)
Query: 10 DAVERDTYLP--KYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSL 67
+AV + TY+ Y + +++++SSRFT KRIGYL A ++ +L TN +
Sbjct: 58 NAVAKLTYIQMLGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMI 117
Query: 68 KNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILK 127
+ DLNS Q+ G+AL L SP++SRDLA+++ LM S+ Y+R KA L Y++ L+
Sbjct: 118 RKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLR 177
Query: 128 VPELMEIFLPATRLLLSDKNHAIHQVK---ILKLLRILGKNDVEASEAMNDILAQVATN- 183
PE + P + L D + + I +L R KN + + ++ N
Sbjct: 178 YPEALRPAFPKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTNNW 237
Query: 184 ------------TETSKNVGN----------------TILYE---TVLSIMDIKSESGLR 212
T +G ++LYE TV++++ I SG+
Sbjct: 238 MLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECINTVIAVL-ISISSGMP 296
Query: 213 ------VLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVS 266
L V L + ++D+N++Y+ L + + + +VQ H++ IL CL D D S
Sbjct: 297 NHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDES 356
Query: 267 IRRRALELSFALVNSANVRSMMKELLIFLEKSEPD-FKAHCSSNIV-LCAER---FAPNK 321
IR RAL+L + +V+ N+ ++K LL +E++E ++ ++ +CA+ + N
Sbjct: 357 IRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRDELLYKVIEICAQSSYLYVTNF 416
Query: 322 RWHLDTLLKVL 332
W+L L++++
Sbjct: 417 EWYLTVLVELI 427
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 166/362 (45%), Gaps = 52/362 (14%)
Query: 23 AHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLA 82
A FG + +K+ KR GYL L L+E D+ +LI N+++ DL S VV A
Sbjct: 83 ASFGYIYAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLRSDNYLVVCAA 142
Query: 83 LCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATRLL 142
L + + + E + +V L+ +RKKA + +R K P + + R
Sbjct: 143 LNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIMALHRFHRKSPSSVSHLVSNFRKR 202
Query: 143 LSD--------------------------------------------KNHAIHQ------ 152
L D K++ HQ
Sbjct: 203 LCDNDPGVMGATLCPLFDLISEDVNSYKDLVSSFVSILKQVTERRLPKSYDYHQMPAPFI 262
Query: 153 -VKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGL 211
+K+LK++ +LG D AS+ M+ +L + ++S N+GN ILYE + I I L
Sbjct: 263 QIKLLKIMALLGSGDKNASDIMSMVLGDLFRKCDSSTNIGNAILYECIRCISCILPNPKL 322
Query: 212 RVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRRRA 271
A + + +FL ++ N++Y+ ++ L R + I ++H+ +++CL+DPD +++R+
Sbjct: 323 LEAAADAISKFLKSDSHNLKYMGIDGLGRLIKISPDIAEQHQLAVIDCLEDPDDTLKRKT 382
Query: 272 LELSFALVNSANVRSMMKELLIFL-EKSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLK 330
EL + + S+NV ++ ++ ++ ++ +K +S V AE+FAP+ +W + + K
Sbjct: 383 FELLYKMTKSSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPSNQWFIQIMNK 442
Query: 331 VL 332
V
Sbjct: 443 VF 444
>sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musculus GN=Ap4e1 PE=2 SV=3
Length = 1122
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 166/360 (46%), Gaps = 52/360 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
Y A FG + +KL +KR+GYL L L E ++ LL+ N++ DL S+ V
Sbjct: 91 YDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVC 150
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVP----------- 129
+AL + I EM + +E ++ S IR+KA L Y+ L P
Sbjct: 151 MALTVVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIAPNQVQHIHTKFR 210
Query: 130 ------------------------------ELMEIFLPATRLLLSDK------NHAIH-- 151
+L E F+ + ++ K H++
Sbjct: 211 KALCDRDVGVMAASLHIYLRMIKENASGYKDLTESFVTILKQVVGGKLPVEFSYHSVPAP 270
Query: 152 --QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSES 209
Q+++L++L +LGK+D SE M D+L + E + NV IL+E V +I I +S
Sbjct: 271 WLQIQLLRILGLLGKDDERTSELMYDVLDESLRRAELNHNVTYAILFECVHTIYSIYPKS 330
Query: 210 GLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRR 269
L A +G+F+L+ N++Y+ L L + D S +H+ TI+ECL PD I+R
Sbjct: 331 ELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPSLALQHQITIIECLDHPDPIIKR 390
Query: 270 RALELSFALVNSANVRSMMKELLIFLEKS-EPDFKAHCSSNIVLCAERFAPNKRWHLDTL 328
LEL + + N+ NV +++++L +L +S E I AE++AP+ W + T+
Sbjct: 391 ETLELLYRITNAQNVVVIVQKMLEYLHQSKEEHIIISLVGRIAELAEKYAPDNVWFIQTM 450
>sp|Q86KI1|AP2A2_DICDI AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1
PE=3 SV=1
Length = 989
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 186/383 (48%), Gaps = 67/383 (17%)
Query: 17 YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQ 76
Y+ Y FG +E + L++S++F++K+IGY+ +LL+E+ ++ LI NS K DL + +
Sbjct: 71 YMLGYELDFGHMEAVTLLSSTKFSEKQIGYIALGILLNEQHEMLPLIINSFKEDLLARSD 130
Query: 77 FVVGLALCTLGAIASPEMSRDLASEVERLM--KSSNAYIRKKAALCAYRI---------- 124
+ LAL + I E++ L+ +++L+ +S+ ++K+ AL R+
Sbjct: 131 YFQSLALAAICNIGGKEVAEFLSPLIQKLLIANTSSPMVKKRCALAILRMNRKHIGLVTP 190
Query: 125 ---------ILKVPEL--------------------MEIFLPATRLLLSD--------KN 147
+L P+ E +P LL K
Sbjct: 191 DSWVERLVSVLDEPDFGVLTSLMSLLIELASENPIGWEPAIPKVIHLLKKIIINKEFPKE 250
Query: 148 HAIHQV-------KILKLLRIL-GKNDVEASEAMNDILAQVATNTETS-------KNVGN 192
+ + V K+LK LR +D + + + +IL V +E++ KN N
Sbjct: 251 YVYYHVTCPWLQVKLLKFLRYFPAPDDSQGGKVLGEILTAVFAQSESAKAGTVNHKNSLN 310
Query: 193 TILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTS-AV 249
+L+E + I+ + ++ L +LGRF+ + NIRY+ L + ++ +TS +
Sbjct: 311 AVLFEAINLIIHLDNDPVLLKQTSLLLGRFITVKETNIRYLGLEAMSHFASLSNETSIMI 370
Query: 250 QRHRNTILECLKDPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSN 309
+++++T+L LKD D+SIRRRAL+L + + + + ++ ELL +L+ ++ +
Sbjct: 371 KKYQDTVLLSLKDSDISIRRRALDLLYGMCDKNTCKHIVAELLSYLQTADYAIREELVIK 430
Query: 310 IVLCAERFAPNKRWHLDTLLKVL 332
I AE+FA N W++D +L+++
Sbjct: 431 IANLAEKFASNYSWYVDVILQLI 453
>sp|Q9UPM8|AP4E1_HUMAN AP-4 complex subunit epsilon-1 OS=Homo sapiens GN=AP4E1 PE=1 SV=2
Length = 1137
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 52/360 (14%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
Y A FG + +KL +KR+GYL L L E ++ LL+ N++ DL S+ V
Sbjct: 92 YDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVC 151
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATR 140
+AL + I EM + +E ++ S +R+KA L Y+ L P ++ R
Sbjct: 152 MALTVVSQIFPCEMIPAVLPLIEDKLQHSKEIVRRKAVLALYKFHLIAPNQVQHIHIKFR 211
Query: 141 LLLSDKN-----------------------------------------------HAIH-- 151
L D++ H++
Sbjct: 212 KALCDRDVGVMAASLHIYLRMIKENSSGYKDLTGSFVTILKQVVGGKLPVEFNYHSVPAP 271
Query: 152 --QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSES 209
Q+++L++L +LGK+D SE M D+L + E + NV IL+E V ++ I +S
Sbjct: 272 WLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAILFECVHTVYSIYPKS 331
Query: 210 GLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRR 269
L A +G+F+L+ N++Y+ L L + D + +H+ TI+ECL PD I+R
Sbjct: 332 ELLEKAAKCIGKFVLSPKINLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPIIKR 391
Query: 270 RALELSFALVNSANVRSMMKELLIFLEKSEPDFK-AHCSSNIVLCAERFAPNKRWHLDTL 328
LEL + + N+ N+ +++++L +L +S+ ++ + I AE++AP+ W + T+
Sbjct: 392 ETLELLYRITNAQNITVIVQKMLEYLHQSKEEYVIVNLVGKIAELAEKYAPDNAWFIQTM 451
>sp|Q54WN0|AP3D_DICDI AP-3 complex subunit delta OS=Dictyostelium discoideum GN=ap3d1
PE=3 SV=1
Length = 1143
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 175/366 (47%), Gaps = 50/366 (13%)
Query: 11 AVERDTYLP--KYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLK 68
AV++ TY+ + + + +++++ ++F+ KRIGYL A +E DV +L T+ ++
Sbjct: 45 AVQKLTYIQMLGFDISWASFKIVEVMSCNKFSSKRIGYLAASQSFNEGTDVIVLATHQIR 104
Query: 69 NDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKV 128
D SS Q LAL L I + +++R+LA+++ L+ + +I K+A Y+I L+
Sbjct: 105 KDFLSSNQSEAYLALNCLSNICTTDLARELANDILTLLSTQKTHILKRAITVLYKIFLRY 164
Query: 129 PELMEIFLPATRLLLSDK--------------------------------------NHAI 150
PE + P R L D N+
Sbjct: 165 PESLRPAFPKLREKLDDPEPSVVSCSVNVICELARRNPKNYLPLAPVLFRILTNTTNNYW 224
Query: 151 HQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLS-IMDIKSES 209
+KI+KL L ++ + + D L + ++ + ++LYE + + I +
Sbjct: 225 MLIKIVKLFAALTPHEPRLGKKLIDPLTNIINSSPSV-----SLLYECIQTCITGMSDHI 279
Query: 210 GLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRR 269
L L ++ L + +ND+N++Y+ L L + I AV HR+ +L CL+D D+SIR
Sbjct: 280 PLMKLCISKLRTLIEHNDQNLKYLGLLALNNIMKIHPKAVSEHRDLVLNCLEDDDISIRL 339
Query: 270 RALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIV-LCA---ERFAPNKRWHL 325
RAL+L + + N+ ++ +LL L+ +E +K I+ LC+ +F + W++
Sbjct: 340 RALDLLPGMTSKKNIGDIVFKLLDHLDNAEGQYKEQIIEKIIELCSMGTYQFITDFEWYI 399
Query: 326 DTLLKV 331
+ L+K+
Sbjct: 400 NILVKL 405
>sp|Q9C744|AP3D_ARATH AP-3 complex subunit delta OS=Arabidopsis thaliana GN=DELTA-ADR
PE=1 SV=1
Length = 869
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 154/317 (48%), Gaps = 45/317 (14%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
+ +++++SSRF KRIGY +++ V LLITN ++ DLNS+ ++ V LAL
Sbjct: 74 WAAFHAVEVVSSSRFQHKRIGYQAITQSFNDQTSVMLLITNQVRKDLNSANEYEVSLALE 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKV---------------- 128
L I + +++RDL EV L+ SS ++++KKA R+ K
Sbjct: 134 CLSRIGTHDLARDLTPEVFTLLGSSKSFVKKKAIGVVLRVFEKYHDAVKVCFKRLVENLE 193
Query: 129 ---PELME----IF-----------LPAT----RLLLSDKNHAIHQVKILKLLRILGKND 166
P+++ +F LP ++L+ +N+ + ++K+L+I K
Sbjct: 194 TSDPQILSAVVGVFCELATKDPQSCLPLAPEFYKVLVDSRNNWV----LIKVLKIFAKLA 249
Query: 167 VEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDIKSESGLRV-LAVNILGRFLLN 225
+ + + + + V ++++E V +++ S++ V LAV + FL+
Sbjct: 250 LIEPRLGKKVAEPICEHMR--RTVAKSLVFECVRTVVSSLSDNEAAVKLAVAKIREFLVE 307
Query: 226 NDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRRRALELSFALVNSANVR 285
+D N++Y+ LN L AV ++ +++ + D D +++ AL L A+VN NV
Sbjct: 308 DDPNLKYLGLNALSIVAPKHLWAVLENKEVVVKAMSDEDPNVKLEALHLLMAMVNEDNVS 367
Query: 286 SMMKELLIFLEKSEPDF 302
+ + L+ + KS+P F
Sbjct: 368 EISRILMNYALKSDPLF 384
>sp|Q9UTL8|AP3D_SCHPO AP-3 complex subunit delta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl5 PE=3 SV=2
Length = 825
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 145/309 (46%), Gaps = 38/309 (12%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
+ + +++++SS+ K+ GYL A+ DV +L TN LK DL SS + LA+
Sbjct: 63 WASFQIVEVMSSSKILQKQKGYLAAVQSFKPDTDVLMLTTNLLKKDLMSSKVPEITLAID 122
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELMEIFLPATRLLLS 144
L ++ ++RDL +V L+ S Y+RK+ L YR+ L+ PE + +P R L
Sbjct: 123 GLSHFSTLGLARDLYRDVLILLNHSVPYVRKRTILLLYRLCLQYPEAISACIPKLRERLD 182
Query: 145 DKNHAIHQVK---ILKLLRILGKNDVEASEAMNDILAQVATN------------------ 183
D + ++ I +L R KN +E + + +L + N
Sbjct: 183 DPDTSVVNAAVSVICELARRAPKNYLEFAPDLFHLLTTSSNNWMLIKLIKLFASLTPYEP 242
Query: 184 ----------TETSKNV-GNTILYETVLSIMDIKSESG------LRVLAVNILGRFLLNN 226
T+ +N ++LYE + +I+ G L L + L F +
Sbjct: 243 RLVKKLIPSLTDIIENTHAMSLLYECINTIVSGNMLVGHSQCDKLASLCASKLRGFFEDT 302
Query: 227 DKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDVSIRRRALELSFALVNSANVRS 286
D+N++Y+AL L + S V + IL+CL D D SIR RAL+L +VN N+R+
Sbjct: 303 DQNLKYIALLCLRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRT 362
Query: 287 MMKELLIFL 295
++K L++ L
Sbjct: 363 IVKTLMLQL 371
>sp|P17427|AP2A2_MOUSE AP-2 complex subunit alpha-2 OS=Mus musculus GN=Ap2a2 PE=1 SV=2
Length = 938
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 194/427 (45%), Gaps = 91/427 (21%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+R+T+K+IGYL +L++ ++ LI N++KNDL S +GLAL
Sbjct: 74 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ + S EM+ A E+ +++ + + +++ AALC R+ P+L+ + +R+
Sbjct: 134 CIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVV 193
Query: 142 -LLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVL 200
LL+D++ + V A+ ++ LAQ N E ++T +
Sbjct: 194 HLLNDQHLGV----------------VTAATSLITTLAQ--KNPEE---------FKTSV 226
Query: 201 SIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECL 260
S LAV+ L R + + +++ ++ + +L+C
Sbjct: 227 S------------LAVSRLSRIVTSASTDLQDYTY------YFVPAPWLSVKLLRLLQCY 268
Query: 261 KDPDVSIRRRALELSFALVNSANVRSMMKEL---------------LIFLEKSEPD---- 301
PD ++R R E ++N A K++ LI SEP+
Sbjct: 269 PPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVR 328
Query: 302 -------FKAHCSSNI---------VLCAERFAPNK-RWHLDTLLKVLVANLLGFSNRAL 344
F H +N+ L + F+ + H++T++ L + R +
Sbjct: 329 ACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALK------TERDV 382
Query: 345 RDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHL 404
++RA++L +A+ + +N + ++ E+L +LE ++ + + + AE++A + W++
Sbjct: 383 SVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYV 442
Query: 405 DTLLKVL 411
DT+L ++
Sbjct: 443 DTILNLI 449
>sp|P18484|AP2A2_RAT AP-2 complex subunit alpha-2 OS=Rattus norvegicus GN=Ap2a2 PE=1
SV=3
Length = 938
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 194/427 (45%), Gaps = 91/427 (21%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+R+T+K+IGYL +L++ ++ LI N++KNDL S +GLAL
Sbjct: 74 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ + S EM+ A E+ +++ + + +++ AALC R+ P+L+ + +R+
Sbjct: 134 CIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVV 193
Query: 142 -LLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVL 200
LL+D++ + V A+ ++ LAQ N E ++T +
Sbjct: 194 HLLNDQHLGV----------------VTAATSLITTLAQ--KNPEE---------FKTSV 226
Query: 201 SIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECL 260
S LAV+ L R + + +++ ++ + +L+C
Sbjct: 227 S------------LAVSRLSRIVTSASTDLQDYTY------YFVPAPWLSVKLLRLLQCY 268
Query: 261 KDPDVSIRRRALELSFALVNSANVRSMMKEL---------------LIFLEKSEPD---- 301
PD ++R R E ++N A K++ LI SEP+
Sbjct: 269 PPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVR 328
Query: 302 -------FKAHCSSNI---------VLCAERFAPNK-RWHLDTLLKVLVANLLGFSNRAL 344
F H +N+ L + F+ + H++T++ L + R +
Sbjct: 329 ACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALK------TERDV 382
Query: 345 RDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHL 404
++RA++L +A+ + +N + ++ E+L +LE ++ + + + AE++A + W++
Sbjct: 383 SVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYV 442
Query: 405 DTLLKVL 411
DT+L ++
Sbjct: 443 DTILNLI 449
>sp|O94973|AP2A2_HUMAN AP-2 complex subunit alpha-2 OS=Homo sapiens GN=AP2A2 PE=1 SV=2
Length = 939
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 194/427 (45%), Gaps = 91/427 (21%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+R+T+K+IGYL +L++ ++ LI N++KNDL S +GLAL
Sbjct: 74 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ ++ S EM+ A E+ +++ + + +++ AALC R+ P+L+ + +R+
Sbjct: 134 CIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVV 193
Query: 142 -LLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVL 200
LL+D++ + V A+ ++ LAQ N E ++T +
Sbjct: 194 HLLNDQHLGV----------------VTAATSLITTLAQ--KNPEE---------FKTSV 226
Query: 201 SIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECL 260
S LAV+ L R + + +++ ++ + +L+C
Sbjct: 227 S------------LAVSRLSRIVTSASTDLQDYTY------YFVPAPWLSVKLLRLLQCY 268
Query: 261 KDPDVSIRRRALELSFALVNSANVRSMMKEL---------------LIFLEKSEPD---- 301
PD ++R R E ++N A K++ LI SEP+
Sbjct: 269 PPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVR 328
Query: 302 -------FKAHCSSNI---------VLCAERFAPNK-RWHLDTLLKVLVANLLGFSNRAL 344
F H +N+ L + F+ + H++T++ L + R +
Sbjct: 329 ACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALK------TERDV 382
Query: 345 RDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHL 404
++RA++L +A+ + +N ++ E+L +LE ++ + + + AE++A + W++
Sbjct: 383 SVRQRAVDLLYAMCDRSNAPQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYV 442
Query: 405 DTLLKVL 411
DT+L ++
Sbjct: 443 DTILNLI 449
>sp|Q08951|AP3D_YEAST AP-3 complex subunit delta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL5 PE=1 SV=1
Length = 932
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 47/327 (14%)
Query: 10 DAVERDTYLPKYPAHFGQLEC----LKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITN 65
+AV + TYL Y F C L++++S++ KR+GYL A + D+ +L TN
Sbjct: 69 NAVLKLTYLEMY--GFDMAWCNFHILEVMSSNKLQQKRVGYLAASQSFYKDSDILMLATN 126
Query: 66 SLKNDL--NSSTQFV-VGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAY 122
LK DL + + V VG+AL L I +P ++RD+A ++ ++ S+ YIRKKA +
Sbjct: 127 LLKKDLKYDGNNDVVKVGIALSGLSTIITPSLARDIADDLFTMLNSTRPYIRKKAITALF 186
Query: 123 RIILKVPELMEIFLPATRLLLSDKNHAIHQVKILKLLRILGKND---VEASEAMNDILAQ 179
++ L+ PE + L D + ++ + + + KN ++ S + +IL
Sbjct: 187 KVFLQYPEALRDNFDKFVSKLDDDDISVVSAAVSVICELSKKNPQPFIQLSPLLYEILVT 246
Query: 180 VATN----------TETSK-------------------NVGNTILYETVLSIM--DIKSE 208
+ N T S+ V +++YE+V I+ ++ E
Sbjct: 247 IDNNWIIIRLLKLFTNLSQVEPKLRAKLLPKILELMESTVATSVIYESVNCIVKGNMLEE 306
Query: 209 SGLRVLAVNILGR---FLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKDPDV 265
A+ L R F + D N+RY++ + I+T + R I+ L D DV
Sbjct: 307 DDFET-AMACLERLHTFCDSQDPNLRYISCILFYKIGKINTDFISRFDQLIIRLLSDVDV 365
Query: 266 SIRRRALELSFALVNSANVRSMMKELL 292
SIR +A+EL +V+ N++++++ L+
Sbjct: 366 SIRSKAIELVEGIVDEDNLKAIVQTLM 392
>sp|O95782|AP2A1_HUMAN AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3
Length = 977
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 153 VKILKLLRILGKNDVEAS-----EAMNDILAQVATNTETSK----NVGNTILYETVLSIM 203
VK+L+LL+ + A E + +L + ++ K N N IL+ET+ I+
Sbjct: 259 VKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLII 318
Query: 204 DIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLK 261
SE L V A N LG+FL + + N+RY+AL ++ L + AV+ H +T++ LK
Sbjct: 319 HYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALK 378
Query: 262 -DPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPN 320
+ DVS+R+RA +L +A+ + +N + ++ E+L +LE ++ + + + AE++A +
Sbjct: 379 TERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAVD 438
Query: 321 KRWHLDTLLKVL 332
W++DT+L ++
Sbjct: 439 YSWYVDTILNLI 450
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+++T+K+IGYL +L++ ++ LI N++KNDL S + LAL
Sbjct: 74 FGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ + S EM A+++ R++ + ++ +++ AALC R+ P+L+ + R+
Sbjct: 134 CIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVV 193
Query: 142 -LLSDKNHAI 150
LL+D++ +
Sbjct: 194 HLLNDQHMGV 203
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 322 RWHLDTLLKVLVANLLGFSNRALRDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDF 381
+ H+DT++ L + R + ++RA +L +A+ + +N + ++ E+L +LE ++
Sbjct: 367 KTHIDTVINALK------TERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
Query: 382 KAHCSSNIVLCAERFAPNKRWHLDTLLKVL 411
+ + + AE++A + W++DT+L ++
Sbjct: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLI 450
>sp|P17426|AP2A1_MOUSE AP-2 complex subunit alpha-1 OS=Mus musculus GN=Ap2a1 PE=1 SV=1
Length = 977
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 153 VKILKLLRILGKNDVEAS-----EAMNDILAQVATNTETSK----NVGNTILYETVLSIM 203
VK+L+LL+ + A E + +L + ++ K N N IL+ET+ I+
Sbjct: 259 VKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLII 318
Query: 204 DIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLK 261
SE L V A N LG+FL + + N+RY+AL ++ L + AV+ H +T++ LK
Sbjct: 319 HYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALK 378
Query: 262 -DPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPN 320
+ DVS+R+RA +L +A+ + +N + ++ E+L +LE ++ + + + AE++A +
Sbjct: 379 TERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILAEKYAVD 438
Query: 321 KRWHLDTLLKVL 332
W++DT+L ++
Sbjct: 439 YSWYVDTILNLI 450
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+++T+K+IGYL +L++ ++ LI N++KNDL S + LAL
Sbjct: 74 FGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ + S EM A+++ R++ + ++ +++ AALC R+ P+L+ + R+
Sbjct: 134 CIANVGSREMGEAFAADIPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVV 193
Query: 142 -LLSDKNHAI 150
LL+D++ +
Sbjct: 194 HLLNDQHMGV 203
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 322 RWHLDTLLKVLVANLLGFSNRALRDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDF 381
+ H+DT++ L + R + ++RA +L +A+ + +N + ++ E+L +LE ++
Sbjct: 367 KTHIDTVINALK------TERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI 420
Query: 382 KAHCSSNIVLCAERFAPNKRWHLDTLLKVL 411
+ + + AE++A + W++DT+L ++
Sbjct: 421 REEIVLKVAILAEKYAVDYSWYVDTILNLI 450
>sp|Q0VCK5|AP2A2_BOVIN AP-2 complex subunit alpha-2 OS=Bos taurus GN=AP2A2 PE=1 SV=1
Length = 938
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 195/428 (45%), Gaps = 92/428 (21%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+R+T+K+IGYL +L++ ++ LI N++KNDL S +GLAL
Sbjct: 74 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALH 133
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ + S EM+ A E+ +++ + + +++ AALC R+ P+L+ + +R+
Sbjct: 134 CIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLHRASPDLVPVGDWTSRVV 193
Query: 142 -LLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVL 200
LL+D++ + V A+ ++ LAQ N E ++T +
Sbjct: 194 HLLNDQHLGV----------------VTAATSLITTLAQ--KNPEE---------FKTSV 226
Query: 201 SIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECL 260
S LAV+ L R + + +++ ++ + +L+C
Sbjct: 227 S------------LAVSRLSRIVTSASTDLQDYTY------YFVPAPWLSVKLLRLLQCY 268
Query: 261 KDP-DVSIRRRALELSFALVNSANVRSMMKEL---------------LIFLEKSEPD--- 301
P D ++R R E A++N A K++ L+ SEP+
Sbjct: 269 PPPEDPAVRGRLTECLEAILNKAQEPPKSKKVQHSNAKNAVLFEAISLVTHHDSEPNLLV 328
Query: 302 --------FKAHCSSNI---------VLCAERFAPNK-RWHLDTLLKVLVANLLGFSNRA 343
F H +N+ L + F+ + H++T++ L + R
Sbjct: 329 RACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALK------TERD 382
Query: 344 LRDQRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWH 403
+ ++RA++L +A+ + +N + ++ E+L +LE ++ + + + AE++A + W+
Sbjct: 383 VSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWY 442
Query: 404 LDTLLKVL 411
+DT+L ++
Sbjct: 443 VDTILNLI 450
>sp|Q755A1|AP3D_ASHGO AP-3 complex subunit delta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL5 PE=3 SV=1
Length = 899
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 152/331 (45%), Gaps = 55/331 (16%)
Query: 10 DAVERDTYLPKY--PAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSL 67
+AV + TYL Y + L++++S+RF KR+GYL A + D+ +L TN L
Sbjct: 67 NAVLKLTYLEMYGFDMSWANFHVLEVMSSTRFQQKRVGYLAASQSFYKDHDILMLATNLL 126
Query: 68 KNDLN---SSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRI 124
+ DL S+ +G+AL L A+ +PE++RD+ ++ ++ S+ YIRKKA +++
Sbjct: 127 RKDLKYSLSNETVRMGVALSGLSAMVTPELARDICEDLFLMLHSTKPYIRKKAVTALFKV 186
Query: 125 ILKVPELM----EIFL-------------------------PATRLLLS----------D 145
L+ PE + E F+ P + LS D
Sbjct: 187 FLQYPEGLRDNFEKFVDRLEDDDLSVVSATVSVICELSKHNPQPFIQLSPILYQMLIKVD 246
Query: 146 KNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSI--- 202
N I +++LKL L + +E + IL V +++ + +++YE++ I
Sbjct: 247 NNWVI--IRLLKLFTNLAQ--IEPKLRVK-ILPNVLELMDSTTAI--SVVYESINCIVKG 299
Query: 203 -MDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLK 261
M + V ++ L F +ND N+RY++ + I+T + IL L
Sbjct: 300 NMLNSDDYDSAVACLDKLHDFCTSNDPNLRYLSCVLFYKIGKINTDFIANFDVLILRLLV 359
Query: 262 DPDVSIRRRALELSFALVNSANVRSMMKELL 292
D DVSIR + LEL +V N+ ++ LL
Sbjct: 360 DVDVSIRSKTLELLEGIVTEDNLVDFVQRLL 390
>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gambiae GN=alpha-Adaptin
PE=3 SV=4
Length = 934
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Query: 189 NVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDT 246
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ L T
Sbjct: 304 NAKNAVLFEAINLIIHNDSEPSLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSH 363
Query: 247 SAVQRHRNTILECLK-DPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAH 305
AV++H+ ++ +K + DVS+R++A++L +A+ + +N +++E+L +LE ++ +
Sbjct: 364 EAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYSIREE 423
Query: 306 CSSNIVLCAERFAPNKRWHLDTLLKVL 332
+ + AE++A + W++D +L ++
Sbjct: 424 MVLKVAILAEKYATDYTWYVDVILNLI 450
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+++++K+IGYL +L++ D+ LI S+KNDL S V LAL
Sbjct: 73 FGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNLALQ 132
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ I S +M+ ++E+ +L+ S + +++ AALC R+ P+++ +R+
Sbjct: 133 CIANIGSQDMAEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGEWTSRII 192
Query: 142 -LLSDKNHAI 150
LL+D++ +
Sbjct: 193 HLLNDQHMGV 202
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 41/65 (63%)
Query: 347 QRRALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDT 406
+++A++L +A+ + +N +++E+L +LE ++ + + + AE++A + W++D
Sbjct: 386 RQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYTWYVDV 445
Query: 407 LLKVL 411
+L ++
Sbjct: 446 ILNLI 450
>sp|Q54VE0|AP4E_DICDI AP-4 complex subunit epsilon OS=Dictyostelium discoideum GN=ap4e1
PE=3 SV=1
Length = 1080
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 148 HAIH----QVKILKLLRILGKNDVEASEAMNDILAQVATNTETSKN-VGNTILYETVLSI 202
H IH Q+ +LKLL LG D ++S M +L ++ KN VG ILYET+ ++
Sbjct: 302 HGIHHPWLQINLLKLLSNLGYQDKDSSNHMYTVLLFTMQQSQKFKNNVGFAILYETIKTL 361
Query: 203 MDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNTILECLKD 262
I L + FL N+RY + L V + V ++ ++E L+
Sbjct: 362 TLIHPNLQLIEQCSKNIAIFLKGKHHNLRYFGIKALASIVKVSPKLVLPYQVEVIESLES 421
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELL--IFLEKSEPDFKAHCSSNIVLCAERFAPN 320
PD +++R++ +L + + N NV + +L+ + L K + +FK+ S I AE+++PN
Sbjct: 422 PDETLKRKSFDLLYKMTNQTNVVPVCSKLIEQLVLSKDQ-NFKSELISQITNIAEKYSPN 480
Query: 321 KRWHLDTLLKVL 332
W++DT+ VL
Sbjct: 481 DIWYIDTISTVL 492
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 21 YPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVG 80
Y FG ++ L + S +KR GYL L L ER ++ ++ NS+ LNSS V
Sbjct: 89 YDVPFGHIQALNMTQDSEILNKRTGYLTLSLCLPERHELLIMAVNSILKGLNSSNYLEVC 148
Query: 81 LALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRI 124
AL + + + +V +L+ +RKK+ +R
Sbjct: 149 SALTAMCKLIDNDTIPAFLQKVLQLLNHQKPIVRKKSVTVLHRF 192
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 347 QRRALELSFALVNSANVRSMMKELL--IFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHL 404
+R++ +L + + N NV + +L+ + L K + +FK+ S I AE+++PN W++
Sbjct: 427 KRKSFDLLYKMTNQTNVVPVCSKLIEQLVLSKDQ-NFKSELISQITNIAEKYSPNDIWYI 485
Query: 405 DTLLKVL 411
DT+ VL
Sbjct: 486 DTISTVL 492
>sp|Q9C0W7|AP2A_SCHPO AP-2 complex subunit alpha OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl3 PE=3 SV=1
Length = 878
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 190/427 (44%), Gaps = 64/427 (14%)
Query: 17 YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQ 76
Y+ YP FG +E KL++ +++++K IGYL LLL+E ++ L+ NS+K DL S
Sbjct: 61 YMLGYPITFGHMEAAKLLSGTKYSEKLIGYLAVALLLNENHELMKLVINSIKKDLLSHDS 120
Query: 77 FVVGLALCTLGAIASPEMSRDLASEVER-LMKSSNAYI-RKKAALCAYRIILKVPELM-- 132
LAL T+ I E+ + ++ + LM +SN I R+K+AL I K P+L+
Sbjct: 121 LQNSLALHTIANIGGRELCETVYYDIYKLLMSASNENIVRQKSALALLHIYRKFPDLINP 180
Query: 133 EIFLPATRLLLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQVATNTET------ 186
E F P ++ ILG +D+ S A+++ + +
Sbjct: 181 EWFEP--------------------IVMILGDDDLNVSLAVSNFVNLIVIREPKYQKFAY 220
Query: 187 SKNVG--NTILYETVLSIMDIKSESGLRVLAVNILGRFLLN----NDKNIRYVALNTLLR 240
K VG I++E S + L VN L R LL +D R + L R
Sbjct: 221 GKAVGKLKNIVFEHGYSSDYLYYSVPCPWLQVN-LCRILLACERPSDNPTRATLIRVLDR 279
Query: 241 TVYI--DTSAVQRHR--NTILECLKDPDVSIRRRALELSFALVNSANV-RSMMKELLIFL 295
+ + D S VQ+ N IL A++L+F + S ++ M L +
Sbjct: 280 ILSLPNDNSNVQQVNAVNAIL-----------FEAIKLAFLVDESHSLYEKCMDRLADMI 328
Query: 296 EKSEPDFKA---HCSSNIVLCAERFAPNKRWHLDTLLKVLVANLLGFSNRALRDQRRALE 352
E + + ++ ++ C K + K L+ + L + + +LR +++LE
Sbjct: 329 ADKESNIRYLAFETTAYLISCGHSITSLKHY------KELILSSLRYKDVSLR--KKSLE 380
Query: 353 LSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLKVLV 412
L + + + N + ++ +LL +L + + S + + +E FA + W++D +++L
Sbjct: 381 LLYMMCDEENAKLIVADLLQYLPHLDSVTQEDLISKVAIISETFATDYEWYVDVTIQLLR 440
Query: 413 AVSENKD 419
++ D
Sbjct: 441 IAGKSAD 447
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 135 FLPATRLLLSDKNHAIHQVKILKLLRILGKNDVEAS------EAMNDILAQVATNTETSK 188
F+PA L VK+L+LL+ EA E + IL + ++ K
Sbjct: 250 FVPAPWL----------SVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKK 299
Query: 189 ----NVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTV 242
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ L T
Sbjct: 300 VQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 243 YIDTSAVQRHRNTILECLK-DPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPD 301
V++H+ ++ +K + DVS+R+ A++L +A+ + N +++E+L +LE ++
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 302 FKAHCSSNIVLCAERFAPNKRWHLDTLLKVL 332
+ + + AE++A + W++D +L ++
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLI 450
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 17 YLPKYPAHFGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQ 76
+L + FG +E + L++S+++++K+IGYL +L++ D+ LI S+KNDL S
Sbjct: 65 FLLGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNP 124
Query: 77 FVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEI 134
V LAL + I S +M+ ++E+ +L+ S + +++ AALC R+ P+++
Sbjct: 125 VHVNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPG 184
Query: 135 FLPATRL--LLSDKNHAI 150
+R+ LL+D++ +
Sbjct: 185 GEWTSRIIHLLNDQHMGV 202
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 37/62 (59%)
Query: 350 ALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLK 409
A++L +A+ + N +++E+L +LE ++ + + + AE++A + W++D +L
Sbjct: 389 AVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYTWYVDVILN 448
Query: 410 VL 411
++
Sbjct: 449 LI 450
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 23/211 (10%)
Query: 135 FLPATRLLLSDKNHAIHQVKILKLLRILGKNDVEAS------EAMNDILAQVATNTETSK 188
F+PA L VK+L+LL+ EA E + IL + ++ K
Sbjct: 250 FVPAPWL----------SVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKK 299
Query: 189 ----NVGNTILYETVLSIMDIKSESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTV 242
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ L T
Sbjct: 300 VQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATS 359
Query: 243 YIDTSAVQRHRNTILECLK-DPDVSIRRRALELSFALVNSANVRSMMKELLIFLEKSEPD 301
V++H+ ++ +K + DVS+R+ A++L +A+ + N +++E+L +LE ++
Sbjct: 360 EFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYS 419
Query: 302 FKAHCSSNIVLCAERFAPNKRWHLDTLLKVL 332
+ + + AE++A + W++D +L ++
Sbjct: 420 IREEMVLKVAILAEKYATDYTWYVDVILNLI 450
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 25 FGQLECLKLIASSRFTDKRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALC 84
FG +E + L++S+++++K+IGYL +L++ D+ LI S+KNDL S V LAL
Sbjct: 73 FGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQ 132
Query: 85 TLGAIASPEMSRDLASEVERLMKSSNAY--IRKKAALCAYRIILKVPELMEIFLPATRL- 141
+ I S +M+ ++E+ +L+ S + +++ AALC R+ P+++ +R+
Sbjct: 133 CIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWTSRII 192
Query: 142 -LLSDKNHAI 150
LL+D++ +
Sbjct: 193 HLLNDQHMGV 202
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 37/62 (59%)
Query: 350 ALELSFALVNSANVRSMMKELLIFLEKSEPDFKAHCSSNIVLCAERFAPNKRWHLDTLLK 409
A++L +A+ + N +++E+L +LE ++ + + + AE++A + W++D +L
Sbjct: 389 AVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATDYTWYVDVILN 448
Query: 410 VL 411
++
Sbjct: 449 LI 450
>sp|Q6P5E6|GGA2_MOUSE ADP-ribosylation factor-binding protein GGA2 OS=Mus musculus
GN=Gga2 PE=1 SV=1
Length = 603
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 17/116 (14%)
Query: 426 YDNHGVVINLLLDSQT--PGDS---VTIVTMQATNENLTLVSDFLFQAAVPKTFQLQMLP 480
YD +G I LL SQT PG V ++TM +T V D +FQ AVPK+ ++++ P
Sbjct: 482 YDRNGFRI-LLHFSQTGAPGHPDVKVLLLTMMSTATQP--VWDVMFQVAVPKSMRVKLQP 538
Query: 481 PSDTNIP------PGSQVTQTLRVAKANNNVQASLRMRIKVSYNVNGTFIQDQAEI 530
S + +P P + ++QTL + +N + +R+R K+++N G + E+
Sbjct: 539 ASSSKLPAFSPLMPPAVISQTLLL---DNPHKEPIRLRYKLTFNQGGQPFSEVGEV 591
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 SSRFTD------------KRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLAL 83
SS FTD K++ YL + + D+ +L N+ D + LA+
Sbjct: 50 SSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAV 109
Query: 84 CTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELME--IFLPATRL 141
T+G I +++ L +++ +K + Y+RK AA+C ++ EL+E FL A +
Sbjct: 110 RTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKD 169
Query: 142 LLSDKN 147
L+SD N
Sbjct: 170 LISDNN 175
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36 SSRFTD------------KRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLAL 83
SS FTD K++ YL + + D+ +L N+ D + LA+
Sbjct: 50 SSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAV 109
Query: 84 CTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALCAYRIILKVPELME--IFLPATRL 141
T+G I +++ L +++ +K + Y+RK AA+C ++ EL+E FL A +
Sbjct: 110 RTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKD 169
Query: 142 LLSDKN 147
L+SD N
Sbjct: 170 LISDNN 175
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 42 KRIGYLGAMLLLDERQDVHLLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASE 101
K++ YL M D +L N+ + D + + LA+ T+G I ++ L
Sbjct: 66 KKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNPLIRALAVRTMGCIRVDNITEHLCEP 125
Query: 102 VERLMKSSNAYIRKKAALCAYRIILKVPELME--IFLPATRLLLSDKN 147
+ +K + Y+RK AA+C ++ PEL+E FL LL D N
Sbjct: 126 LRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDLLGDSN 173
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFENLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA-------IHQVK- 154
Y I I PEL+ FL + L+ +D++ A I QV+
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQT 218
Query: 155 ---ILKLL------RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
IL+L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPSHERVLQDLVMDILRVLST 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 49/275 (17%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + E+ L + ++ ++Y+R+ A L
Sbjct: 99 ILVCDAYRKDLQHPNEFIRGSTLRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLA 158
Query: 121 AYRI-------ILKVPELMEIFLPATR-----------LLLSDKNHA------------- 149
Y I I PEL+ FL + L+ +D++ A
Sbjct: 159 IYTIYRNFEHLIPDAPELIHDFLVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHT 218
Query: 150 ---IHQVKILKLL-RILGKNDVEASEAMNDILAQVATNTETSKNVGNTILYETVLSIMDI 205
I Q+ I++L+ ++ N E + + I + +++ K YE +++ +
Sbjct: 219 FGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSSPAVK-------YEAAGTLVTL 271
Query: 206 KS-ESGLRVLAVNILGRFLLNNDKNIRYVALNTL--LRTVYIDTSAVQRHRNTILECLKD 262
S + ++ A + + +D N++ + L+ L L+ +Q IL L
Sbjct: 272 SSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPTHERVLQDLVMDILRVLTT 331
Query: 263 PDVSIRRRALELSFALVNSANVRSMMKELLIFLEK 297
PD+ +R++ L+L+ LV+S NV +EL+I L+K
Sbjct: 332 PDLEVRKKTLQLALDLVSSRNV----EELVIVLKK 362
>sp|Q9NFU6|COPB_TRYBB Coatomer subunit beta OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 982
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+LI + L+ DL +++ GLAL + + E+ L S V + + Y+R+ A L
Sbjct: 98 ILICSFLREDLLHPNEYIRGLALRFMCKVKERELVEPLVSSVVQNLTHRVTYVRRNAVLA 157
Query: 121 AYRIILKVPELMEIFLPATRLLLSDKNHAIHQVKILKLLRILGKNDVEASEAMNDILAQV 180
+RI + PEL+ +S++N ++L VE S D + +
Sbjct: 158 VHRIFKRFPELLPDAAELVEKFISEENDVSASRNAFEML-------VECSP---DRVVKF 207
Query: 181 ATNTETSKN---VGNTILYETVLSIMD-----IKSESGLRVLAVNILGRFLLNNDKNIRY 232
SKN +G T+ +SI+D I++ + V +L L +N+ +RY
Sbjct: 208 LAELRESKNLESLGATLQ----MSIVDFAGHMIRANPYDKGRYVTVLFSILQSNNPAVRY 263
Query: 233 VALNTLLRTVYIDTSAVQRHRNTILECLK-DPDVSIR 268
+TLL ++ +A+++ T ++ LK D+S+R
Sbjct: 264 QCASTLL-SISTSPTAIRQAALTFIDLLKTHTDISVR 299
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 57/272 (20%)
Query: 61 LLITNSLKNDLNSSTQFVVGLALCTLGAIASPEMSRDLASEVERLMKSSNAYIRKKAALC 120
+L+ ++ + DL +F+ G L L + PE+ L + + ++Y+R+ A L
Sbjct: 96 ILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLA 155
Query: 121 AYRI-------ILKVPELMEIFLPATRLLLSDKN------HAIHQVKILKLLRILGKNDV 167
+ I + PEL+ FL + + +N HA Q + L L + +
Sbjct: 156 IFTIYKNFDWLVPDGPELIANFLDTQQDMSCKRNAFLMLLHA-DQERALNYL----ASCI 210
Query: 168 EASEAMNDILAQV----------ATNTETSKNV----------GNTILYETVLSIMDIK- 206
+ + DIL V A E S+ + N + YE+ +++ +
Sbjct: 211 DQVHSFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLLNSSSNAVRYESAGTLITLSL 270
Query: 207 SESGLRVLAVNILGRFLLNNDKNIRYVALNTLLRTVYIDTSAVQRHRNT----------I 256
+ + ++ A + + +D N++ + L+ L+ A++ + N +
Sbjct: 271 APTAIKAAASCYIELIVKESDNNVKLIVLDRLI--------AMKENENMEKVMQDLVMDV 322
Query: 257 LECLKDPDVSIRRRALELSFALVNSANVRSMM 288
L L PD+ +RR+AL L+ LV S N+ M+
Sbjct: 323 LRVLAAPDIEVRRKALALAMDLVYSRNIGEMV 354
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,313,645
Number of Sequences: 539616
Number of extensions: 6386630
Number of successful extensions: 17443
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 17166
Number of HSP's gapped (non-prelim): 254
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)