BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4021
(65 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312381170|gb|EFR26979.1| hypothetical protein AND_06590 [Anopheles darlingi]
Length = 1073
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 46/48 (95%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVLQFQNKKLAQR+EQ+ R E+ELRSRIEQLEKRQTQDDAVLNVV
Sbjct: 51 MDIKVLQFQNKKLAQRIEQRIRCESELRSRIEQLEKRQTQDDAVLNVV 98
>gi|170033165|ref|XP_001844449.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873728|gb|EDS37111.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1020
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVLQFQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 80 MDIKVLQFQNKKLAQRIEQRVRCEAELRQRIEQLEKRQTQDDAVLNVV 127
>gi|157109409|ref|XP_001650655.1| hypothetical protein AaeL_AAEL000730 [Aedes aegypti]
gi|108883976|gb|EAT48201.1| AAEL000730-PA [Aedes aegypti]
Length = 982
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVLQFQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLQFQNKKLAQRIEQRVRCEAELRQRIEQLEKRQTQDDAVLNVV 92
>gi|195376855|ref|XP_002047208.1| GJ13313 [Drosophila virilis]
gi|194154366|gb|EDW69550.1| GJ13313 [Drosophila virilis]
Length = 1062
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 49 MDIKVLEFQNKKLAQRIEQRMRCEAELRHRIEQLEKRQTQDDAVLNVV 96
>gi|195337725|ref|XP_002035476.1| GM13896 [Drosophila sechellia]
gi|194128569|gb|EDW50612.1| GM13896 [Drosophila sechellia]
Length = 1044
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|357624659|gb|EHJ75355.1| hypothetical protein KGM_09234 [Danaus plexippus]
Length = 915
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVLQFQNKKLAQR+EQ++R EAELR+RIEQLEKRQTQDDAVL VV
Sbjct: 37 MDIKVLQFQNKKLAQRIEQRHRCEAELRARIEQLEKRQTQDDAVLCVV 84
>gi|195552622|ref|XP_002076513.1| GD17597 [Drosophila simulans]
gi|194202124|gb|EDX15700.1| GD17597 [Drosophila simulans]
Length = 1044
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|194750178|ref|XP_001957507.1| GF10444 [Drosophila ananassae]
gi|190624789|gb|EDV40313.1| GF10444 [Drosophila ananassae]
Length = 1080
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 84 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 131
>gi|25012540|gb|AAN71372.1| RE34950p [Drosophila melanogaster]
Length = 1044
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|24658707|ref|NP_647989.2| Bre1 [Drosophila melanogaster]
gi|74948427|sp|Q9VRP9.2|BRE1_DROME RecName: Full=E3 ubiquitin-protein ligase Bre1; AltName:
Full=dBre1
gi|23094129|gb|AAF50744.2| Bre1 [Drosophila melanogaster]
gi|226958696|gb|ACO95725.1| FI09417p [Drosophila melanogaster]
Length = 1044
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|195492068|ref|XP_002093832.1| GE20535 [Drosophila yakuba]
gi|194179933|gb|EDW93544.1| GE20535 [Drosophila yakuba]
Length = 1044
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|195173416|ref|XP_002027487.1| GL10311 [Drosophila persimilis]
gi|194114388|gb|EDW36431.1| GL10311 [Drosophila persimilis]
Length = 1047
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 48 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 95
>gi|194867223|ref|XP_001972024.1| GG14111 [Drosophila erecta]
gi|190653807|gb|EDV51050.1| GG14111 [Drosophila erecta]
Length = 1044
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>gi|125978188|ref|XP_001353127.1| GA10386 [Drosophila pseudoobscura pseudoobscura]
gi|54641878|gb|EAL30628.1| GA10386 [Drosophila pseudoobscura pseudoobscura]
Length = 1047
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 48 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 95
>gi|195127201|ref|XP_002008057.1| GI12042 [Drosophila mojavensis]
gi|193919666|gb|EDW18533.1| GI12042 [Drosophila mojavensis]
Length = 1062
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 49 MDIKVLEFQNKKLAQRIEQRMRCEAELRHRIEQLEKRQTQDDAVLNVV 96
>gi|195428767|ref|XP_002062437.1| GK17536 [Drosophila willistoni]
gi|194158522|gb|EDW73423.1| GK17536 [Drosophila willistoni]
Length = 1067
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 48 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 95
>gi|242006288|ref|XP_002423984.1| ubiquitin-protein ligase BRE1A, putative [Pediculus humanus
corporis]
gi|212507266|gb|EEB11246.1| ubiquitin-protein ligase BRE1A, putative [Pediculus humanus
corporis]
Length = 989
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DIKV+QFQNKKLAQRLEQ++R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 39 LDIKVIQFQNKKLAQRLEQRHRIEAELRQRIEQLEKRQTQDDAVLNVV 86
>gi|193678945|ref|XP_001949533.1| PREDICTED: e3 ubiquitin-protein ligase Bre1-like [Acyrthosiphon
pisum]
Length = 953
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 47/48 (97%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D+KVLQ+QNKKLAQRLEQ+NR EAELR+RIEQLEKRQTQDD+VLNVV
Sbjct: 35 LDMKVLQYQNKKLAQRLEQRNRLEAELRNRIEQLEKRQTQDDSVLNVV 82
>gi|383857052|ref|XP_003704020.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Megachile
rotundata]
Length = 957
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|307199111|gb|EFN79821.1| E3 ubiquitin-protein ligase Bre1 [Harpegnathos saltator]
Length = 957
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|350402387|ref|XP_003486466.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Bombus
impatiens]
Length = 957
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|340711825|ref|XP_003394469.1| PREDICTED: e3 ubiquitin-protein ligase Bre1-like [Bombus
terrestris]
Length = 957
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRVEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|345483701|ref|XP_001601663.2| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Nasonia
vitripennis]
Length = 955
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R E ELR RIEQLEKRQTQDDAVLNVV
Sbjct: 37 MDMKVLQFQNKKLAQRLEQRHRVEIELRQRIEQLEKRQTQDDAVLNVV 84
>gi|307180966|gb|EFN68754.1| E3 ubiquitin-protein ligase Bre1 [Camponotus floridanus]
Length = 964
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|322796552|gb|EFZ19026.1| hypothetical protein SINV_06436 [Solenopsis invicta]
Length = 482
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|332019306|gb|EGI59813.1| E3 ubiquitin-protein ligase Bre1 [Acromyrmex echinatior]
Length = 307
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RIEQLEKRQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRMEAELRQRIEQLEKRQMQDDAVLNVV 83
>gi|195021472|ref|XP_001985401.1| GH17039 [Drosophila grimshawi]
gi|193898883|gb|EDV97749.1| GH17039 [Drosophila grimshawi]
Length = 1046
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAE R RIEQLEKRQTQDDAVLNVV
Sbjct: 54 MDIKVLEFQNKKLAQRIEQRMRCEAEQRHRIEQLEKRQTQDDAVLNVV 101
>gi|189240891|ref|XP_971710.2| PREDICTED: similar to CG10542 CG10542-PA [Tribolium castaneum]
gi|270013497|gb|EFA09945.1| hypothetical protein TcasGA2_TC012098 [Tribolium castaneum]
Length = 976
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVLQFQNKKLAQR+EQ+ R E ELR RIEQLEKRQTQDDA+LNVV
Sbjct: 36 MDIKVLQFQNKKLAQRIEQRYRTEQELRQRIEQLEKRQTQDDAMLNVV 83
>gi|158285848|ref|XP_308493.4| AGAP007335-PA [Anopheles gambiae str. PEST]
gi|157020186|gb|EAA45420.4| AGAP007335-PA [Anopheles gambiae str. PEST]
Length = 1064
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 46/48 (95%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DIKVL+FQNKKLAQR+EQ+ R E+ELR+RIEQLEKRQTQDDAVLNVV
Sbjct: 60 LDIKVLKFQNKKLAQRIEQRIRCESELRTRIEQLEKRQTQDDAVLNVV 107
>gi|380030127|ref|XP_003698707.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Apis florea]
Length = 953
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RI+QLE RQ QDDAVLNVV
Sbjct: 36 MDMKVLQFQNKKLAQRLEQRHRVEAELRERIQQLEIRQMQDDAVLNVV 83
>gi|328778821|ref|XP_625025.3| PREDICTED: e3 ubiquitin-protein ligase Bre1, partial [Apis
mellifera]
Length = 930
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKLAQRLEQ++R EAELR RI+QLE RQ QDDAVLNVV
Sbjct: 9 MDMKVLQFQNKKLAQRLEQRHRVEAELRERIQQLEIRQMQDDAVLNVV 56
>gi|321469893|gb|EFX80871.1| hypothetical protein DAPPUDRAFT_188104 [Daphnia pulex]
Length = 958
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQFQNKKL+QRLE + R EAELR RIEQLEKRQ QDDAVLNV+
Sbjct: 38 MDMKVLQFQNKKLSQRLELRQRTEAELRQRIEQLEKRQMQDDAVLNVI 85
>gi|241999404|ref|XP_002434345.1| E3 ubiquitin protein ligase Bre1, putative [Ixodes scapularis]
gi|215497675|gb|EEC07169.1| E3 ubiquitin protein ligase Bre1, putative [Ixodes scapularis]
Length = 891
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 41/48 (85%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+K LQFQN+KLAQRLEQ+ R E ELR+R+EQLEKRQT D+ VL VV
Sbjct: 1 MDMKTLQFQNRKLAQRLEQRIRQENELRARVEQLEKRQTSDEGVLTVV 48
>gi|427788661|gb|JAA59782.1| Putative bre1 [Rhipicephalus pulchellus]
Length = 906
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+K LQFQN+KLAQRL+Q+ R E+ELR+R+EQLEKRQT D+ VL VV
Sbjct: 1 MDMKTLQFQNRKLAQRLDQRIRQESELRARVEQLEKRQTSDEGVLTVV 48
>gi|332845787|ref|XP_003315121.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Pan troglodytes]
Length = 951
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 104 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 151
>gi|207080094|ref|NP_001128807.1| DKFZP459F026 protein [Pongo abelii]
gi|55729081|emb|CAH91277.1| hypothetical protein [Pongo abelii]
Length = 961
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|444725788|gb|ELW66342.1| E3 ubiquitin-protein ligase BRE1B [Tupaia chinensis]
Length = 1031
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|426254595|ref|XP_004020962.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Ovis
aries]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|338712882|ref|XP_003362789.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 2 [Equus
caballus]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|40788319|dbj|BAA31636.2| KIAA0661 protein [Homo sapiens]
Length = 1030
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 76 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 123
>gi|333440442|ref|NP_001193963.1| E3 ubiquitin-protein ligase BRE1B isoform 3 [Homo sapiens]
gi|119572583|gb|EAW52198.1| ring finger protein 40, isoform CRA_b [Homo sapiens]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|397471940|ref|XP_003807522.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Pan
paniscus]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|345801553|ref|XP_848895.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Canis
lupus familiaris]
Length = 1000
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|338712880|ref|XP_001495920.3| PREDICTED: e3 ubiquitin-protein ligase BRE1B isoform 1 [Equus
caballus]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|335284373|ref|XP_003354586.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1B-like [Sus scrofa]
Length = 1021
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|395514876|ref|XP_003761637.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2
[Sarcophilus harrisii]
Length = 914
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|10179425|gb|AAG13723.1|AF122819_1 Rb-associated protein [Homo sapiens]
Length = 838
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|402908150|ref|XP_003916817.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Papio
anubis]
gi|402908154|ref|XP_003916819.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Papio
anubis]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|301778801|ref|XP_002924807.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Ailuropoda
melanoleuca]
gi|281352711|gb|EFB28295.1| hypothetical protein PANDA_014222 [Ailuropoda melanoleuca]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|410984766|ref|XP_003998697.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Felis catus]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|302565348|ref|NP_001181143.1| E3 ubiquitin-protein ligase BRE1B [Macaca mulatta]
gi|355710137|gb|EHH31601.1| E3 ubiquitin-protein ligase BRE1B [Macaca mulatta]
gi|355756716|gb|EHH60324.1| E3 ubiquitin-protein ligase BRE1B [Macaca fascicularis]
gi|380818426|gb|AFE81086.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
gi|383423255|gb|AFH34841.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|403276880|ref|XP_003930110.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|402908152|ref|XP_003916818.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Papio
anubis]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|119572584|gb|EAW52199.1| ring finger protein 40, isoform CRA_c [Homo sapiens]
Length = 838
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|330340457|ref|NP_001193381.1| E3 ubiquitin-protein ligase BRE1B [Bos taurus]
gi|296473193|tpg|DAA15308.1| TPA: ring finger protein 40 [Bos taurus]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|384950604|gb|AFI38907.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Macaca mulatta]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|313104295|sp|O75150.4|BRE1B_HUMAN RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=95 kDa retinoblastoma-associated protein;
Short=RBP95; AltName: Full=RING finger protein 40
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|47077096|dbj|BAD18476.1| unnamed protein product [Homo sapiens]
Length = 347
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|426254593|ref|XP_004020961.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Ovis
aries]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|197098878|ref|NP_001125651.1| E3 ubiquitin-protein ligase BRE1B [Pongo abelii]
gi|75061874|sp|Q5RAU7.1|BRE1B_PONAB RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|55728748|emb|CAH91113.1| hypothetical protein [Pongo abelii]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|348584336|ref|XP_003477928.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Cavia porcellus]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|30584681|gb|AAP36593.1| Homo sapiens ring finger protein 40 [synthetic construct]
gi|60653785|gb|AAX29586.1| ring finger protein 40 [synthetic construct]
gi|60653787|gb|AAX29587.1| ring finger protein 40 [synthetic construct]
Length = 1002
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|50949948|emb|CAH10518.1| hypothetical protein [Homo sapiens]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|7662230|ref|NP_055586.1| E3 ubiquitin-protein ligase BRE1B isoform 1 [Homo sapiens]
gi|13543994|gb|AAH06133.1| Ring finger protein 40 [Homo sapiens]
gi|15079968|gb|AAH11769.1| Ring finger protein 40 [Homo sapiens]
gi|17391423|gb|AAH18647.1| Ring finger protein 40 [Homo sapiens]
gi|119572582|gb|EAW52197.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|119572585|gb|EAW52200.1| ring finger protein 40, isoform CRA_a [Homo sapiens]
gi|123993535|gb|ABM84369.1| ring finger protein 40 [synthetic construct]
gi|124000569|gb|ABM87793.1| ring finger protein 40 [synthetic construct]
gi|168267490|dbj|BAG09801.1| E3 ubiquitin-protein ligase BRE1B [synthetic construct]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|333440440|ref|NP_001193962.1| E3 ubiquitin-protein ligase BRE1B isoform 2 [Homo sapiens]
gi|158256764|dbj|BAF84355.1| unnamed protein product [Homo sapiens]
Length = 1000
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|395514874|ref|XP_003761636.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1
[Sarcophilus harrisii]
Length = 1014
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|126334514|ref|XP_001364447.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Monodelphis
domestica]
Length = 1014
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|440911762|gb|ELR61398.1| E3 ubiquitin-protein ligase BRE1B [Bos grunniens mutus]
Length = 1002
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|426381895|ref|XP_004057566.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 2 [Gorilla
gorilla gorilla]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|417405562|gb|JAA49490.1| Putative e3 ubiquitin ligase involved in syntaxin degradation
[Desmodus rotundus]
Length = 1000
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 46 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 93
>gi|348584334|ref|XP_003477927.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Cavia porcellus]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|344294403|ref|XP_003418907.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Loxodonta africana]
Length = 901
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|426381893|ref|XP_004057565.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Gorilla
gorilla gorilla]
Length = 1000
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|403276878|ref|XP_003930109.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403276882|ref|XP_003930111.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|397471938|ref|XP_003807521.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B isoform 1 [Pan
paniscus]
gi|410224050|gb|JAA09244.1| ring finger protein 40 [Pan troglodytes]
gi|410265686|gb|JAA20809.1| ring finger protein 40 [Pan troglodytes]
gi|410354903|gb|JAA44055.1| ring finger protein 40 [Pan troglodytes]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|344294401|ref|XP_003418906.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Loxodonta africana]
Length = 1001
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|390471519|ref|XP_002807467.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Callithrix jacchus]
Length = 948
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLFIV 94
>gi|431906852|gb|ELK10973.1| E3 ubiquitin-protein ligase BRE1B [Pteropus alecto]
Length = 1001
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|345317695|ref|XP_001521737.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like, partial
[Ornithorhynchus anatinus]
Length = 874
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 5 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 52
>gi|14042062|dbj|BAB55092.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV------VNESVY 54
MD+KVLQF++KKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V ++E+V
Sbjct: 47 MDLKVLQFKDKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVE 106
Query: 55 FP 56
P
Sbjct: 107 AP 108
>gi|148685617|gb|EDL17564.1| ring finger protein 40, isoform CRA_d [Mus musculus]
Length = 933
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|74196106|dbj|BAE32971.1| unnamed protein product [Mus musculus]
Length = 1001
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|229093990|ref|NP_758485.2| E3 ubiquitin-protein ligase BRE1B [Mus musculus]
gi|84027769|sp|Q3U319.2|BRE1B_MOUSE RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|26354679|dbj|BAC40966.1| unnamed protein product [Mus musculus]
gi|74142858|dbj|BAE42468.1| unnamed protein product [Mus musculus]
gi|148685614|gb|EDL17561.1| ring finger protein 40, isoform CRA_a [Mus musculus]
Length = 1001
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|148685616|gb|EDL17563.1| ring finger protein 40, isoform CRA_c [Mus musculus]
Length = 1012
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|23468326|gb|AAH38348.1| Ring finger protein 40 [Mus musculus]
Length = 1001
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|37360032|dbj|BAC97994.1| mKIAA0661 protein [Mus musculus]
Length = 1035
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 81 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 128
>gi|149067706|gb|EDM17258.1| ring finger protein 40, isoform CRA_c [Rattus norvegicus]
Length = 1013
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|23618895|ref|NP_703201.1| E3 ubiquitin-protein ligase BRE1B [Rattus norvegicus]
gi|81900544|sp|Q8CJB9.1|BRE1B_RAT RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40; AltName:
Full=Syntaxin-1-interacting RING finger protein;
Short=Protein staring
gi|23268469|gb|AAN16401.1|AF352815_1 staring [Rattus norvegicus]
gi|149067707|gb|EDM17259.1| ring finger protein 40, isoform CRA_d [Rattus norvegicus]
Length = 1002
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|149067704|gb|EDM17256.1| ring finger protein 40, isoform CRA_a [Rattus norvegicus]
Length = 936
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|354499385|ref|XP_003511789.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Cricetulus griseus]
Length = 901
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|354499383|ref|XP_003511788.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Cricetulus griseus]
gi|344247531|gb|EGW03635.1| E3 ubiquitin-protein ligase BRE1B [Cricetulus griseus]
Length = 1001
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|405957579|gb|EKC23781.1| E3 ubiquitin-protein ligase Bre1 [Crassostrea gigas]
Length = 1004
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D+KVL+FQNKKLA+R+EQ+ RAE EL+ RI+QLE RQ DDAVL +V
Sbjct: 48 LDMKVLRFQNKKLAERVEQRKRAEDELKRRIDQLENRQRTDDAVLMIV 95
>gi|432116997|gb|ELK37566.1| E3 ubiquitin-protein ligase BRE1B [Myotis davidii]
Length = 1012
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNESVYFPNLIV 60
MD+KVL+F+NKKL++RLEQ+ E ELR RIE+LEKRQ DDA L ++VN Y+ L V
Sbjct: 76 MDLKVLRFKNKKLSERLEQRQACEDELRERIEKLEKRQATDDATL-LIVNR--YWAQLEV 132
Query: 61 T 61
T
Sbjct: 133 T 133
>gi|75076748|sp|Q4R7K7.1|BRE1B_MACFA RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B;
AltName: Full=RING finger protein 40
gi|67969122|dbj|BAE00915.1| unnamed protein product [Macaca fascicularis]
Length = 1001
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 IDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 94
>gi|327286050|ref|XP_003227744.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Anolis
carolinensis]
Length = 1029
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQAFEDELRERIEKLEKRQATDDATLLIV 94
>gi|351711445|gb|EHB14364.1| E3 ubiquitin-protein ligase BRE1B [Heterocephalus glaber]
Length = 1000
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DD L +V
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDVTLLIV 94
>gi|27503853|gb|AAH42342.1| LOC398536 protein, partial [Xenopus laevis]
Length = 618
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR +IE+LEKRQ DDA L +V
Sbjct: 47 MDMKVLQFKNKKLAERLEQRQGFEDELREKIEKLEKRQATDDATLLIV 94
>gi|28302342|gb|AAH46690.1| LOC398495 protein, partial [Xenopus laevis]
Length = 622
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR +IE+LEKRQ DDA L +V
Sbjct: 47 MDMKVLQFKNKKLAERLEQRQGFEDELREKIEKLEKRQATDDATLLIV 94
>gi|391328026|ref|XP_003738494.1| PREDICTED: E3 ubiquitin-protein ligase Bre1-like [Metaseiulus
occidentalis]
Length = 906
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D + LQFQN+KLAQRLEQ+ R E ELRSRIEQLEKRQ D+ V+ +
Sbjct: 32 LDTRTLQFQNRKLAQRLEQRLRHEQELRSRIEQLEKRQQSDENVITTI 79
>gi|301622630|ref|XP_002940628.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B [Xenopus (Silurana)
tropicalis]
Length = 991
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR +IE+LEKRQ DDA L +V
Sbjct: 47 MDMKVLQFKNKKLAERLEQRQGFEDELREKIEKLEKRQATDDATLLIV 94
>gi|332262966|ref|XP_003280528.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B [Nomascus leucogenys]
Length = 945
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L +V
Sbjct: 104 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIV 151
>gi|260834199|ref|XP_002612099.1| hypothetical protein BRAFLDRAFT_104815 [Branchiostoma floridae]
gi|229297472|gb|EEN68108.1| hypothetical protein BRAFLDRAFT_104815 [Branchiostoma floridae]
Length = 655
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 11/74 (14%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV-----------V 49
+D+KVLQFQN+KLA+RLEQ+ E ELR RIE+LEKRQ D+ L +V
Sbjct: 45 LDLKVLQFQNRKLAERLEQRKAIEDELRERIERLEKRQLADEGALGLVNRYWTLEGDQLT 104
Query: 50 NESVYFPNLIVTKI 63
NE+ P L I
Sbjct: 105 NEAEAKPQLAAGPI 118
>gi|317419249|emb|CBN81286.1| E3 ubiquitin-protein ligase BRE1A [Dicentrarchus labrax]
Length = 1015
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|317419248|emb|CBN81285.1| E3 ubiquitin-protein ligase BRE1A [Dicentrarchus labrax]
Length = 985
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|317419247|emb|CBN81284.1| E3 ubiquitin-protein ligase BRE1A [Dicentrarchus labrax]
Length = 992
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|317419246|emb|CBN81283.1| E3 ubiquitin-protein ligase BRE1A [Dicentrarchus labrax]
Length = 938
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|348502513|ref|XP_003438812.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like [Oreochromis
niloticus]
Length = 940
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KVLQF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVLQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|53734468|gb|AAH83485.1| Si:rp71-1c10.1 protein [Danio rerio]
Length = 331
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQALEDELREKIEKLEKRQATDDTTLLIV 96
>gi|194387134|dbj|BAG59933.1| unnamed protein product [Homo sapiens]
Length = 693
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNESV 53
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ Q +++ NES+
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQAQ----FSLLYNESL 95
>gi|410895745|ref|XP_003961360.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 3
[Takifugu rubripes]
Length = 1007
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|115432032|ref|NP_001005778.2| ring finger protein 40 [Danio rerio]
gi|115313222|gb|AAI24133.1| Si:rp71-1c10.1 [Danio rerio]
gi|182892062|gb|AAI65765.1| Si:rp71-1c10.1 protein [Danio rerio]
Length = 562
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQALEDELREKIEKLEKRQATDDTTLLIV 96
>gi|47226004|emb|CAG04378.1| unnamed protein product [Tetraodon nigroviridis]
Length = 929
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL++RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLSERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|410895741|ref|XP_003961358.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 1
[Takifugu rubripes]
Length = 1016
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|410895747|ref|XP_003961361.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 4
[Takifugu rubripes]
Length = 998
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|410895743|ref|XP_003961359.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like isoform 2
[Takifugu rubripes]
Length = 935
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|432923277|ref|XP_004080411.1| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like [Oryzias
latipes]
Length = 934
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L +V
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIV 96
>gi|291232119|ref|XP_002735992.1| PREDICTED: ring finger protein 40-like [Saccoglossus kowalevskii]
Length = 698
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
MDIKVL+FQNKKLA RLE + E +LR RI++LE+RQ D+AVL
Sbjct: 40 MDIKVLKFQNKKLADRLELRKTVEEDLRDRIQRLERRQGNDEAVL 84
>gi|256075664|ref|XP_002574137.1| serine/threonine protein kinase [Schistosoma mansoni]
Length = 1767
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D + LQ QNKKL + L ++ A AEL+ RIE LE RQT+DDA+L VV
Sbjct: 714 LDKRALQLQNKKLWEALMERRAAIAELKERIEHLENRQTKDDALLCVV 761
>gi|360043439|emb|CCD78852.1| putative e3 ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)
[Schistosoma mansoni]
Length = 1762
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D + LQ QNKKL + L ++ A AEL+ RIE LE RQT+DDA+L VV
Sbjct: 714 LDKRALQLQNKKLWEALMERRAAIAELKERIEHLENRQTKDDALLCVV 761
>gi|165970911|gb|AAI58372.1| Unknown (protein for IMAGE:7578643) [Xenopus (Silurana)
tropicalis]
Length = 147
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
D++ LQ +NKKLA L+Q+ E ELR RIE LE+RQ DDA L ++
Sbjct: 47 DLRTLQLKNKKLAGMLDQRQAIEDELRDRIETLERRQATDDASLLII 93
>gi|76154346|gb|AAX25833.2| SJCHGC03878 protein [Schistosoma japonicum]
Length = 315
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D + LQ QNKKL + L ++ A AE++ RIE LE RQT+DDA+L VV
Sbjct: 60 LDKRALQLQNKKLWEALMERRAAIAEMKERIEHLENRQTKDDALLCVV 107
>gi|345314915|ref|XP_003429565.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like, partial
[Ornithorhynchus anatinus]
Length = 346
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 143 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 190
>gi|163914497|ref|NP_001106332.1| ring finger protein 20, E3 ubiquitin protein ligase [Xenopus
laevis]
gi|161611780|gb|AAI55891.1| LOC100127292 protein [Xenopus laevis]
Length = 965
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
D++ LQ +NKKLA L+Q+ E ELR RIE LE+RQ DDA L +V
Sbjct: 47 DLRTLQLKNKKLAGMLDQRQAIEDELRDRIETLERRQATDDASLLIV 93
>gi|26351619|dbj|BAC39446.1| unnamed protein product [Mus musculus]
Length = 195
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|387019657|gb|AFJ51946.1| e3 ubiquitin-protein ligase BRE1A-like [Crotalus adamanteus]
Length = 982
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LEKRQ DDA L ++
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLEKRQATDDASLLII 93
>gi|26343729|dbj|BAC35521.1| unnamed protein product [Mus musculus]
Length = 278
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|444727954|gb|ELW68426.1| E3 ubiquitin-protein ligase BRE1A [Tupaia chinensis]
Length = 1242
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 320 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 367
>gi|74213725|dbj|BAC34590.2| unnamed protein product [Mus musculus]
Length = 358
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|111305922|gb|AAI21447.1| rnf40 protein [Xenopus (Silurana) tropicalis]
Length = 593
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
D++ LQ +NKKLA L+Q+ E ELR RIE LE+RQ DDA L ++
Sbjct: 47 DLRTLQLKNKKLAGMLDQRQAIEDELRDRIETLERRQATDDASLLII 93
>gi|74197306|dbj|BAE43337.1| unnamed protein product [Mus musculus]
Length = 607
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|380793337|gb|AFE68544.1| E3 ubiquitin-protein ligase BRE1A, partial [Macaca mulatta]
Length = 585
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|74143335|dbj|BAE24170.1| unnamed protein product [Mus musculus]
Length = 466
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|301625440|ref|XP_002941911.1| PREDICTED: e3 ubiquitin-protein ligase BRE1A [Xenopus (Silurana)
tropicalis]
Length = 965
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
D++ LQ +NKKLA L+Q+ E ELR RIE LE+RQ DDA L ++
Sbjct: 47 DLRTLQLKNKKLAGMLDQRQAIEDELRDRIETLERRQATDDASLLII 93
>gi|119579361|gb|EAW58957.1| ring finger protein 20, isoform CRA_c [Homo sapiens]
Length = 1067
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 136 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 183
>gi|395516072|ref|XP_003762218.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Sarcophilus
harrisii]
Length = 981
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQTIEDELREHIEKLERRQATDDASLLIV 93
>gi|148670360|gb|EDL02307.1| ring finger protein 20, isoform CRA_a [Mus musculus]
Length = 938
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|116283527|gb|AAH16691.1| RNF20 protein [Homo sapiens]
Length = 617
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 35 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 82
>gi|327263735|ref|XP_003216673.1| PREDICTED: e3 ubiquitin-protein ligase BRE1A-like [Anolis
carolinensis]
Length = 985
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|149020185|gb|EDL78174.1| ring finger protein 20 (predicted) [Rattus norvegicus]
Length = 844
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|440894711|gb|ELR47097.1| E3 ubiquitin-protein ligase BRE1A [Bos grunniens mutus]
Length = 978
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|296190442|ref|XP_002806548.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1A-like [Callithrix jacchus]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|291382871|ref|XP_002708189.1| PREDICTED: ring finger protein 20-like [Oryctolagus cuniculus]
Length = 991
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 62 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 109
>gi|126335698|ref|XP_001366392.1| PREDICTED: e3 ubiquitin-protein ligase BRE1A isoform 1
[Monodelphis domestica]
Length = 981
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|354483764|ref|XP_003504062.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Cricetulus griseus]
gi|344245489|gb|EGW01593.1| E3 ubiquitin-protein ligase BRE1A [Cricetulus griseus]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|119579359|gb|EAW58955.1| ring finger protein 20, isoform CRA_a [Homo sapiens]
Length = 904
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|60360142|dbj|BAD90290.1| mKIAA4116 protein [Mus musculus]
gi|148670361|gb|EDL02308.1| ring finger protein 20, isoform CRA_b [Mus musculus]
Length = 979
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 52 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 99
>gi|355716865|gb|AES05750.1| ring finger protein 20 [Mustela putorius furo]
Length = 984
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 55 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 102
>gi|345777659|ref|XP_532018.3| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Canis lupus
familiaris]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|56403724|emb|CAI29652.1| hypothetical protein [Pongo abelii]
Length = 685
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|348569988|ref|XP_003470779.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
BRE1A-like [Cavia porcellus]
Length = 959
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 47 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 94
>gi|301782195|ref|XP_002926513.1| PREDICTED: e3 ubiquitin-protein ligase BRE1A-like [Ailuropoda
melanoleuca]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|38648808|gb|AAH63115.1| RNF20 protein, partial [Homo sapiens]
Length = 695
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|311246136|ref|XP_001926629.2| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Sus scrofa]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|281345461|gb|EFB21045.1| hypothetical protein PANDA_016165 [Ailuropoda melanoleuca]
Length = 982
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|164565379|ref|NP_001101399.2| E3 ubiquitin-protein ligase BRE1A [Rattus norvegicus]
Length = 973
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|14279233|gb|AAK58539.1|AF265230_1 RING finger protein 20 [Homo sapiens]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|426219771|ref|XP_004004091.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A isoform 1 [Ovis
aries]
gi|426219773|ref|XP_004004092.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A isoform 2 [Ovis
aries]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|10433974|dbj|BAB14081.1| unnamed protein product [Homo sapiens]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|395823938|ref|XP_003785232.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Otolemur garnettii]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|332222386|ref|XP_003260349.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Nomascus
leucogenys]
Length = 976
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|125991958|ref|NP_001075056.1| E3 ubiquitin-protein ligase BRE1A [Bos taurus]
gi|182627578|sp|A2VDP1.1|BRE1A_BOVIN RecName: Full=E3 ubiquitin-protein ligase BRE1A; Short=BRE1-A;
AltName: Full=RING finger protein 20
gi|124829114|gb|AAI33335.1| Ring finger protein 20 [Bos taurus]
gi|296484425|tpg|DAA26540.1| TPA: E3 ubiquitin-protein ligase BRE1A [Bos taurus]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|297685008|ref|XP_002820093.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Pongo abelii]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|410978758|ref|XP_003995755.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Felis catus]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|344272107|ref|XP_003407877.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Loxodonta
africana]
Length = 977
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|119579360|gb|EAW58956.1| ring finger protein 20, isoform CRA_b [Homo sapiens]
Length = 975
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|33859829|ref|NP_892044.1| E3 ubiquitin-protein ligase BRE1A [Mus musculus]
gi|253795509|ref|NP_001156735.1| E3 ubiquitin-protein ligase BRE1A [Mus musculus]
gi|84027767|sp|Q5DTM8.2|BRE1A_MOUSE RecName: Full=E3 ubiquitin-protein ligase BRE1A; Short=BRE1-A;
AltName: Full=RING finger protein 20
gi|30851165|gb|AAH52482.1| Ring finger protein 20 [Mus musculus]
Length = 973
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|149738980|ref|XP_001504055.1| PREDICTED: e3 ubiquitin-protein ligase BRE1A [Equus caballus]
Length = 975
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|34878777|ref|NP_062538.5| E3 ubiquitin-protein ligase BRE1A [Homo sapiens]
gi|387849262|ref|NP_001248502.1| E3 ubiquitin-protein ligase BRE1A [Macaca mulatta]
gi|114625940|ref|XP_520159.2| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Pan troglodytes]
gi|397499967|ref|XP_003820701.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Pan paniscus]
gi|402896810|ref|XP_003911478.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Papio anubis]
gi|84027766|sp|Q5VTR2.2|BRE1A_HUMAN RecName: Full=E3 ubiquitin-protein ligase BRE1A; Short=BRE1-A;
Short=hBRE1; AltName: Full=RING finger protein 20
gi|83405148|gb|AAI10585.1| Ring finger protein 20 [Homo sapiens]
gi|83405553|gb|AAI10586.1| Ring finger protein 20 [Homo sapiens]
gi|156229689|gb|AAI52310.1| Ring finger protein 20 [Homo sapiens]
gi|189067315|dbj|BAG37025.1| unnamed protein product [Homo sapiens]
gi|383420033|gb|AFH33230.1| E3 ubiquitin-protein ligase BRE1A [Macaca mulatta]
gi|384948268|gb|AFI37739.1| E3 ubiquitin-protein ligase BRE1A [Macaca mulatta]
gi|410251428|gb|JAA13681.1| ring finger protein 20 [Pan troglodytes]
gi|410307764|gb|JAA32482.1| ring finger protein 20 [Pan troglodytes]
gi|410333923|gb|JAA35908.1| ring finger protein 20 [Pan troglodytes]
Length = 975
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|7020447|dbj|BAA91134.1| unnamed protein product [Homo sapiens]
Length = 682
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 30 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 77
>gi|7020947|dbj|BAA91326.1| unnamed protein product [Homo sapiens]
Length = 670
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 30 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 77
>gi|426362553|ref|XP_004048424.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Gorilla gorilla
gorilla]
Length = 975
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|355567575|gb|EHH23916.1| E3 ubiquitin-protein ligase BRE1A [Macaca mulatta]
gi|355753153|gb|EHH57199.1| E3 ubiquitin-protein ligase BRE1A [Macaca fascicularis]
Length = 976
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|71895309|ref|NP_001026605.1| E3 ubiquitin-protein ligase BRE1A [Gallus gallus]
gi|82197874|sp|Q5ZLS3.1|BRE1A_CHICK RecName: Full=E3 ubiquitin-protein ligase BRE1A; Short=BRE1-A;
AltName: Full=RING finger protein 20
gi|53128642|emb|CAG31320.1| hypothetical protein RCJMB04_5a23 [Gallus gallus]
Length = 984
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLII 93
>gi|449266687|gb|EMC77709.1| E3 ubiquitin-protein ligase BRE1A [Columba livia]
Length = 984
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++
Sbjct: 46 LDIRTLQAKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLII 93
>gi|449514898|ref|XP_002187177.2| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Taeniopygia
guttata]
Length = 950
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++
Sbjct: 10 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLII 57
>gi|432110694|gb|ELK34171.1| E3 ubiquitin-protein ligase BRE1A [Myotis davidii]
Length = 1071
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 136 DIRTLQAKNRKLAEMLDQRQTIEDELREHIEKLERRQATDDASLLIV 182
>gi|47215543|emb|CAG06273.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1038
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR RIE+LE RQ DDA L
Sbjct: 61 DIKALQVKNRKLGESLDQRQVIEDELRERIERLETRQATDDASL 104
>gi|417413299|gb|JAA52986.1| Putative e3 ubiquitin ligase involved in syntaxin degradation,
partial [Desmodus rotundus]
Length = 983
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 55 DIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 101
>gi|47199606|emb|CAF87722.1| unnamed protein product [Tetraodon nigroviridis]
Length = 169
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR RIE+LE RQ DDA L
Sbjct: 64 DIKALQVKNRKLGESLDQRQVIEDELRERIERLETRQATDDASL 107
>gi|403298707|ref|XP_003940151.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A [Saimiri boliviensis
boliviensis]
Length = 975
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ ++Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 46 LDIRTLQAKNRKLAEMMDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|351695618|gb|EHA98536.1| E3 ubiquitin-protein ligase BRE1A [Heterocephalus glaber]
Length = 975
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 47 DIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASLLIV 93
>gi|410913859|ref|XP_003970406.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Takifugu
rubripes]
Length = 1016
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR RIE+LE RQ DDA L
Sbjct: 61 DIKALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASL 104
>gi|390341951|ref|XP_797688.3| PREDICTED: E3 ubiquitin-protein ligase Bre1-like
[Strongylocentrotus purpuratus]
Length = 1000
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKL +RL+ ++ E +LR +IE+L RQ D+ VL ++
Sbjct: 46 MDIKVLRFQNKKLVERLDIRSVLENDLRGQIERLHSRQNTDEYVLGLM 93
>gi|348514299|ref|XP_003444678.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oreochromis
niloticus]
Length = 998
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR RIE+LE RQ DDA L
Sbjct: 61 DIKALQTKNRKLGESLDQRQVIEDELRERIERLETRQATDDASL 104
>gi|32451936|gb|AAH54652.1| LOC402838 protein, partial [Danio rerio]
Length = 605
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR R+E LE RQ DDA L
Sbjct: 58 DIKALQIKNRKLGEALDQRQVIEDELRERVETLETRQATDDASL 101
>gi|431909844|gb|ELK12946.1| E3 ubiquitin-protein ligase BRE1A [Pteropus alecto]
Length = 1040
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI+ LQ +N+KLA+ ++Q+ E ELR IE+LE+RQ DDA L +V
Sbjct: 115 LDIRTLQTKNRKLAEMVDQRQAIEDELREHIEKLERRQATDDASLLIV 162
>gi|27882353|gb|AAH44539.1| LOC402838 protein, partial [Danio rerio]
Length = 574
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR R+E LE RQ DDA L
Sbjct: 27 DIKALQIKNRKLGEALDQRQVIEDELRERVETLETRQATDDASL 70
>gi|432878524|ref|XP_004073351.1| PREDICTED: E3 ubiquitin-protein ligase BRE1A-like [Oryzias latipes]
Length = 1024
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR RIE+LE RQ DDA L
Sbjct: 61 DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASL 104
>gi|198436405|ref|XP_002119407.1| PREDICTED: similar to ring finger protein 20 isoform 2 [Ciona
intestinalis]
Length = 909
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+K+L+FQNKKL +++E + +AE EL +IE +E +QT DA L++V
Sbjct: 41 MDLKMLKFQNKKLWEKIEIRRQAERELEDQIETMEAKQTATDATLSLV 88
>gi|198436403|ref|XP_002119359.1| PREDICTED: similar to ring finger protein 20 isoform 1 [Ciona
intestinalis]
Length = 941
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MD+K+L+FQNKKL +++E + +AE EL +IE +E +QT DA L++V
Sbjct: 41 MDLKMLKFQNKKLWEKIEIRRQAERELEDQIETMEAKQTATDATLSLV 88
>gi|371874078|ref|NP_001243104.1| E3 ubiquitin-protein ligase BRE1A [Danio rerio]
Length = 1013
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 2 DIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVL 45
DIK LQ +N+KL + L+Q+ E ELR R+E LE RQ DDA L
Sbjct: 58 DIKALQIKNRKLGEALDQRQVIEDELRERVETLETRQATDDASL 101
>gi|324500637|gb|ADY40293.1| E3 ubiquitin-protein ligase BRE1B [Ascaris suum]
Length = 917
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNES 52
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA+L ++N S
Sbjct: 45 IDAKVLAVQHYKLSERFRHKERQRDQLQKRVEQLESRQAQDDAML-CIINRS 95
>gi|324500631|gb|ADY40290.1| E3 ubiquitin-protein ligase BRE1B [Ascaris suum]
Length = 945
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNES 52
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA+L ++N S
Sbjct: 45 IDAKVLAVQHYKLSERFRHKERQRDQLQKRVEQLESRQAQDDAML-CIINRS 95
>gi|358335539|dbj|GAA31256.2| E3 ubiquitin-protein ligase Bre1 [Clonorchis sinensis]
Length = 1563
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D + LQ QNKKL + L ++ +ELR RIEQLE RQ +DDA+L V+
Sbjct: 489 LDKRALQLQNKKLWEVLIERRAIISELRERIEQLENRQAKDDALLCVI 536
>gi|170577789|ref|XP_001894139.1| CG10542-PA [Brugia malayi]
gi|158599402|gb|EDP37024.1| CG10542-PA, putative [Brugia malayi]
Length = 167
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA++ +
Sbjct: 45 IDAKVLAVQHYKLSERFRLKERQTTQLQHRVEQLESRQAQDDAMMCTI 92
>gi|402584058|gb|EJW78000.1| hypothetical protein WUBG_11090, partial [Wuchereria bancrofti]
Length = 121
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA++ +
Sbjct: 45 IDAKVLAVQHYKLSERFRLKERQTTQLQHRVEQLESRQAQDDAMMCTI 92
>gi|393911058|gb|EFO25573.2| RING finger protein 20 [Loa loa]
Length = 917
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA++ +
Sbjct: 45 IDAKVLAVQHYKLSERFRLKERQATQLQHRVEQLESRQAQDDAMMCTI 92
>gi|312071195|ref|XP_003138496.1| RING finger protein 20 [Loa loa]
Length = 895
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D KVL Q+ KL++R K R +L+ R+EQLE RQ QDDA++ +
Sbjct: 45 IDAKVLAVQHYKLSERFRLKERQATQLQHRVEQLESRQAQDDAMMCTI 92
>gi|388513575|gb|AFK44849.1| unknown [Lotus japonicus]
Length = 163
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI VLQ+QN+KL Q+LE + A L +++ QL + Q D+ L VV
Sbjct: 41 LDIAVLQYQNQKLLQKLETQKLEYAALENKLSQLNESQHSYDSALTVV 88
>gi|339243833|ref|XP_003377842.1| zinc finger protein [Trichinella spiralis]
gi|316973295|gb|EFV56913.1| zinc finger protein [Trichinella spiralis]
Length = 919
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNESVYF 55
++I +L+ QNK+L RL Q R E ELR +I+ LE + +DDA+L+++ S Y
Sbjct: 44 VEIFLLKVQNKRLFGRLNQNRRIEDELRKKIDNLESHRIKDDALLSLM---SAYL 95
>gi|356498180|ref|XP_003517931.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
max]
Length = 874
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI VLQ+QN+KL Q+LE + A L +R L++RQ D+ L VV
Sbjct: 34 LDIVVLQYQNQKLTQKLETQKLEYAGLENRFSHLKERQKSYDSTLEVV 81
>gi|357504631|ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago
truncatula]
gi|355497619|gb|AES78822.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago
truncatula]
Length = 947
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI VLQ+QN+KL Q+LE + A L ++ QL+++Q D+ L VV
Sbjct: 37 LDIAVLQYQNQKLTQKLETQKLEYAALENKFSQLKEKQQSYDSTLAVV 84
>gi|449668852|ref|XP_002166155.2| PREDICTED: E3 ubiquitin-protein ligase BRE1B-like [Hydra
magnipapillata]
Length = 874
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DIKVL+ QNK L RLE+KN E E + R +LE+ + D +++ +
Sbjct: 37 LDIKVLKIQNKNLFSRLEEKNSQEDEFKVRFSKLERLRENDHNIISAM 84
>gi|340368406|ref|XP_003382743.1| PREDICTED: e3 ubiquitin-protein ligase BRE1B-like [Amphimedon
queenslandica]
Length = 880
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 29/35 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLE 35
+DIKVLQ QN+KLA+RL+++N + L+ R+++LE
Sbjct: 37 LDIKVLQIQNRKLAERLKERNHHQDLLQQRVDRLE 71
>gi|255580072|ref|XP_002530869.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
gi|223529558|gb|EEF31509.1| Ubiquitin-protein ligase bre-1, putative [Ricinus communis]
Length = 945
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNE 51
+D+ VLQ QN+KL Q+L+ + +L S+I++L+ RQT D +L + VN+
Sbjct: 101 VDVAVLQCQNQKLVQQLDLQKHELHDLESKIQELKDRQTSYDDML-ITVNQ 150
>gi|356539611|ref|XP_003538290.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
max]
Length = 873
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+DI VLQ+QN+KL Q+LE + A L +R L++ Q D+ L VV
Sbjct: 34 LDIVVLQYQNQKLTQKLETQKLEYAGLENRFSLLKESQKSYDSTLAVV 81
>gi|255541122|ref|XP_002511625.1| protein binding protein, putative [Ricinus communis]
gi|223548805|gb|EEF50294.1| protein binding protein, putative [Ricinus communis]
Length = 420
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D VLQFQN+KL Q+LE + + L ++ QL+++Q D+ L V
Sbjct: 39 LDTAVLQFQNQKLVQKLEAQKVEYSALENKYTQLKEKQQPYDSTLKAV 86
>gi|222056857|ref|YP_002539219.1| histidine kinase [Geobacter daltonii FRC-32]
gi|221566146|gb|ACM22118.1| histidine kinase [Geobacter daltonii FRC-32]
Length = 500
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 10 NKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNE 51
N +L+ +E K+RAEA+LR+ +QLE+ T+ A L + E
Sbjct: 228 NDRLSAEVEAKHRAEADLRAHHDQLERAVTERTADLTTLNKE 269
>gi|224067588|ref|XP_002302510.1| histone ubiquitination proteins group [Populus trichocarpa]
gi|222844236|gb|EEE81783.1| histone ubiquitination proteins group [Populus trichocarpa]
Length = 877
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
+D VLQ+QN+KL Q+LE + L +R QL+++Q ++ LN V
Sbjct: 31 LDTTVLQYQNQKLQQKLEAQKVEHFALGNRFSQLKEKQQPYNSTLNAV 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 772,387,187
Number of Sequences: 23463169
Number of extensions: 20489922
Number of successful extensions: 192074
Number of sequences better than 100.0: 249
Number of HSP's better than 100.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 191692
Number of HSP's gapped (non-prelim): 386
length of query: 65
length of database: 8,064,228,071
effective HSP length: 37
effective length of query: 28
effective length of database: 7,196,090,818
effective search space: 201490542904
effective search space used: 201490542904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)