Your job contains 1 sequence.
>psy4021
MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNESVYFPNLIV
TKIFW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4021
(65 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086694 - symbol:Bre1 "Bre1" species:7227 "Drosoph... 205 3.2e-15 1
UNIPROTKB|H3BQ99 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 3.1e-12 1
UNIPROTKB|H3BUL6 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 3.1e-12 1
UNIPROTKB|I3L332 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 3.1e-12 1
UNIPROTKB|H3BP71 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 6.8e-11 1
UNIPROTKB|F1RG77 - symbol:RNF40 "Uncharacterized protein"... 164 7.2e-11 1
UNIPROTKB|E1BCI2 - symbol:RNF40 "Uncharacterized protein"... 164 7.2e-11 1
UNIPROTKB|E2R1L5 - symbol:RNF40 "Uncharacterized protein"... 164 7.2e-11 1
UNIPROTKB|O75150 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 7.2e-11 1
UNIPROTKB|Q5RAU7 - symbol:RNF40 "E3 ubiquitin-protein lig... 164 7.2e-11 1
UNIPROTKB|Q4R7K7 - symbol:RNF40 "E3 ubiquitin-protein lig... 160 1.9e-10 1
MGI|MGI:2142048 - symbol:Rnf40 "ring finger protein 40" s... 160 1.9e-10 1
RGD|628638 - symbol:Rnf40 "ring finger protein 40, E3 ubi... 160 1.9e-10 1
UNIPROTKB|F8W8Z4 - symbol:RNF40 "E3 ubiquitin-protein lig... 148 2.3e-09 1
ZFIN|ZDB-GENE-030131-6607 - symbol:rnf40 "ring finger pro... 149 2.9e-09 1
UNIPROTKB|C9J0A5 - symbol:RNF20 "E3 ubiquitin-protein lig... 125 4.2e-08 1
UNIPROTKB|C9JWJ4 - symbol:RNF20 "E3 ubiquitin-protein lig... 125 4.2e-08 1
UNIPROTKB|C9JXC9 - symbol:RNF20 "E3 ubiquitin-protein lig... 125 4.2e-08 1
MGI|MGI:1925927 - symbol:Rnf20 "ring finger protein 20" s... 125 1.0e-06 1
RGD|1311936 - symbol:Rnf20 "ring finger protein 20, E3 ub... 125 1.0e-06 1
UNIPROTKB|A2VDP1 - symbol:RNF20 "E3 ubiquitin-protein lig... 125 1.0e-06 1
UNIPROTKB|F6XUF9 - symbol:RNF20 "Uncharacterized protein"... 125 1.0e-06 1
UNIPROTKB|Q5VTR2 - symbol:RNF20 "E3 ubiquitin-protein lig... 125 1.0e-06 1
UNIPROTKB|F1SSB0 - symbol:LOC100154259 "Uncharacterized p... 125 1.0e-06 1
UNIPROTKB|E2QZB1 - symbol:RNF20 "Uncharacterized protein"... 125 1.0e-06 1
UNIPROTKB|F1N9A6 - symbol:RNF20 "E3 ubiquitin-protein lig... 124 1.3e-06 1
UNIPROTKB|Q5ZLS3 - symbol:RNF20 "E3 ubiquitin-protein lig... 124 1.3e-06 1
>FB|FBgn0086694 [details] [associations]
symbol:Bre1 "Bre1" species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016570 "histone
modification" evidence=IMP] [GO:0007422 "peripheral nervous system
development" evidence=NAS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0007219 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0016574
eggNOG:NOG263074 KO:K10696 GeneTree:ENSGT00390000002866
ChiTaRS:RNF20 OMA:TAFGQND EMBL:AY058651 EMBL:BT001617 EMBL:BT082047
RefSeq:NP_647989.2 UniGene:Dm.855 ProteinModelPortal:Q9VRP9
SMR:Q9VRP9 MINT:MINT-767697 STRING:Q9VRP9 PaxDb:Q9VRP9
EnsemblMetazoa:FBtr0077116 GeneID:38652 KEGG:dme:Dmel_CG10542
CTD:38652 FlyBase:FBgn0086694 InParanoid:Q9VRP9 OrthoDB:EOG4GXD2Q
PhylomeDB:Q9VRP9 GenomeRNAi:38652 NextBio:809724 Bgee:Q9VRP9
GermOnline:CG10542 GO:GO:0006513 Uniprot:Q9VRP9
Length = 1044
Score = 205 (77.2 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 42/48 (87%), Positives = 45/48 (93%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVV 48
MDIKVL+FQNKKLAQR+EQ+ R EAELR RIEQLEKRQTQDDAVLNVV
Sbjct: 45 MDIKVLEFQNKKLAQRIEQRMRTEAELRHRIEQLEKRQTQDDAVLNVV 92
>UNIPROTKB|H3BQ99 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0043005 "neuron projection" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] GO:GO:0043234 GO:GO:0006511 GO:GO:0004842
EMBL:AC106886 HGNC:HGNC:16867 Ensembl:ENST00000563909 Bgee:H3BQ99
Uniprot:H3BQ99
Length = 111
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|H3BUL6 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0043005 "neuron projection" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] GO:GO:0043234 GO:GO:0006511 GO:GO:0004842
EMBL:AC106886 HGNC:HGNC:16867 Ensembl:ENST00000566811 Bgee:H3BUL6
Uniprot:H3BUL6
Length = 129
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|I3L332 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0043005 "neuron projection" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] GO:GO:0043234 GO:GO:0006511 GO:GO:0004842
EMBL:AC106886 HGNC:HGNC:16867 Ensembl:ENST00000565931 Bgee:I3L332
Uniprot:I3L332
Length = 144
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|H3BP71 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
ProteinModelPortal:H3BP71 SMR:H3BP71 Ensembl:ENST00000563683
Bgee:H3BP71 Uniprot:H3BP71
Length = 961
Score = 164 (62.8 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|F1RG77 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:FP102572 Ensembl:ENSSSCT00000008534 Uniprot:F1RG77
Length = 1000
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|E1BCI2 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 KO:K10696 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 GO:GO:0033503 CTD:9810
OMA:CHESQGE EMBL:DAAA02057908 IPI:IPI00704650 RefSeq:NP_001193381.1
UniGene:Bt.21360 ProteinModelPortal:E1BCI2
Ensembl:ENSBTAT00000004443 GeneID:539901 KEGG:bta:539901
NextBio:20878289 Uniprot:E1BCI2
Length = 1001
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|E2R1L5 [details] [associations]
symbol:RNF40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0033523 GO:GO:0010390
GeneTree:ENSGT00390000002866 GO:GO:0033503 OMA:CHESQGE
EMBL:AAEX03004385 EMBL:AAEX03004386 Ensembl:ENSCAFT00000026446
Uniprot:E2R1L5
Length = 1001
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|O75150 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017075 "syntaxin-1 binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0033503 "HULC
complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0043005
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AF122819
EMBL:AB014561 EMBL:AK027406 EMBL:BX640763 EMBL:CR627431
EMBL:AC106886 EMBL:BC004527 EMBL:BC006133 EMBL:BC011769
EMBL:BC018647 EMBL:BC030802 IPI:IPI00162563 IPI:IPI00290648
IPI:IPI00377273 PIR:JC7363 RefSeq:NP_001193962.1
RefSeq:NP_001193963.1 RefSeq:NP_055586.1 UniGene:Hs.65238
ProteinModelPortal:O75150 SMR:O75150 IntAct:O75150
MINT:MINT-1466706 STRING:O75150 PhosphoSite:O75150 PaxDb:O75150
PRIDE:O75150 DNASU:9810 Ensembl:ENST00000324685
Ensembl:ENST00000357890 GeneID:9810 KEGG:hsa:9810 UCSC:uc002dzq.3
UCSC:uc010cab.3 CTD:9810 GeneCards:GC16P030773 HGNC:HGNC:16867
HPA:HPA041330 MIM:607700 neXtProt:NX_O75150 PharmGKB:PA34440
InParanoid:O75150 OMA:CHESQGE OrthoDB:EOG4933HD PhylomeDB:O75150
GenomeRNAi:9810 NextBio:36932 ArrayExpress:O75150 Bgee:O75150
CleanEx:HS_RNF40 Genevestigator:O75150 GermOnline:ENSG00000103549
Uniprot:O75150
Length = 1001
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|Q5RAU7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0010390
"histone monoubiquitination" evidence=ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISS] [GO:0033503 "HULC complex"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 KO:K10696
GO:GO:0033523 GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503
CTD:9810 EMBL:CR858915 EMBL:CR859085 RefSeq:NP_001125651.1
RefSeq:NP_001128807.1 UniGene:Pab.19132 UniGene:Pab.19770
ProteinModelPortal:Q5RAU7 PRIDE:Q5RAU7 GeneID:100172570
GeneID:100189714 KEGG:pon:100172570 KEGG:pon:100189714
InParanoid:Q5RAU7 Uniprot:Q5RAU7
Length = 1001
Score = 164 (62.8 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|Q4R7K7 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9541 "Macaca fascicularis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISS] [GO:0033503 "HULC
complex" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031625 GO:GO:0033523
GO:GO:0010390 HOVERGEN:HBG080312 GO:GO:0033503 EMBL:AB168810
ProteinModelPortal:Q4R7K7 PRIDE:Q4R7K7 Uniprot:Q4R7K7
Length = 1001
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+D+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 IDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>MGI|MGI:2142048 [details] [associations]
symbol:Rnf40 "ring finger protein 40" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0017075 "syntaxin-1 binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033503 "HULC complex" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2142048
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AK129184 EMBL:AK042654
EMBL:AK089805 EMBL:AK154982 EMBL:AK171462 EMBL:BC038348
IPI:IPI00621791 RefSeq:NP_758485.2 UniGene:Mm.41122
ProteinModelPortal:Q3U319 SMR:Q3U319 PhosphoSite:Q3U319
PaxDb:Q3U319 PRIDE:Q3U319 Ensembl:ENSMUST00000033088 GeneID:233900
KEGG:mmu:233900 UCSC:uc009jwe.2 InParanoid:Q3U319 NextBio:381935
Bgee:Q3U319 CleanEx:MM_RNF40 Genevestigator:Q3U319
GermOnline:ENSMUSG00000030816 Uniprot:Q3U319
Length = 1001
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 34/50 (68%), Positives = 40/50 (80%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>RGD|628638 [details] [associations]
symbol:Rnf40 "ring finger protein 40, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA;ISO] [GO:0017075 "syntaxin-1 binding" evidence=IPI]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA;ISO]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0033503
"HULC complex" evidence=ISO;ISS] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:628638 Prosite:PS00518 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0046872
GO:GO:0008270 GO:GO:0043005 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907 eggNOG:NOG263074
KO:K10696 GO:GO:0033523 GO:GO:0010390 GeneTree:ENSGT00390000002866
HOGENOM:HOG000231526 HOVERGEN:HBG080312 GO:GO:0033503 CTD:9810
OMA:CHESQGE OrthoDB:EOG4933HD EMBL:AF352815 IPI:IPI00194637
RefSeq:NP_703201.1 UniGene:Rn.162466 ProteinModelPortal:Q8CJB9
IntAct:Q8CJB9 PhosphoSite:Q8CJB9 PRIDE:Q8CJB9
Ensembl:ENSRNOT00000025499 GeneID:266712 KEGG:rno:266712
UCSC:RGD:628638 InParanoid:Q8CJB9 BRENDA:6.3.2.19 NextBio:624538
Genevestigator:Q8CJB9 GermOnline:ENSRNOG00000018840 Uniprot:Q8CJB9
Length = 1002
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 34/50 (68%), Positives = 40/50 (80%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ DDA L ++VN
Sbjct: 47 MDSKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATL-LIVN 95
>UNIPROTKB|F8W8Z4 [details] [associations]
symbol:RNF40 "E3 ubiquitin-protein ligase BRE1B"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC106886 HGNC:HGNC:16867
IPI:IPI01012850 ProteinModelPortal:F8W8Z4 SMR:F8W8Z4
Ensembl:ENST00000402121 UCSC:uc010vfb.2 ArrayExpress:F8W8Z4
Bgee:F8W8Z4 Uniprot:F8W8Z4
Length = 693
Score = 148 (57.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVNESV 53
MD+KVLQF+NKKLA+RLEQ+ E ELR RIE+LEKRQ Q +++ NES+
Sbjct: 47 MDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQAQ----FSLLYNESL 95
>ZFIN|ZDB-GENE-030131-6607 [details] [associations]
symbol:rnf40 "ring finger protein 40" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-030131-6607 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00390000002866 EMBL:AL732488
EMBL:CT030027 IPI:IPI00615866 Ensembl:ENSDART00000145221
ArrayExpress:F6P841 Bgee:F6P841 Uniprot:F6P841
Length = 1004
Score = 149 (57.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
MD+KV+QF+NKKL +RLEQ+ E ELR +IE+LEKRQ DD L ++VN
Sbjct: 49 MDMKVIQFKNKKLCERLEQRQALEDELREKIEKLEKRQATDDTTL-LIVN 97
>UNIPROTKB|C9J0A5 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] EMBL:AL353621 EMBL:AL591377 HGNC:HGNC:10062
ChiTaRS:RNF20 IPI:IPI00946858 ProteinModelPortal:C9J0A5
STRING:C9J0A5 PRIDE:C9J0A5 Ensembl:ENST00000466817
ArrayExpress:C9J0A5 Bgee:C9J0A5 Uniprot:C9J0A5
Length = 145
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|C9JWJ4 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] EMBL:AL353621 EMBL:AL591377 HGNC:HGNC:10062
ChiTaRS:RNF20 IPI:IPI00945996 STRING:C9JWJ4 Ensembl:ENST00000479306
ArrayExpress:C9JWJ4 Bgee:C9JWJ4 Uniprot:C9JWJ4
Length = 99
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|C9JXC9 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] EMBL:AL353621 EMBL:AL591377 HGNC:HGNC:10062
ChiTaRS:RNF20 IPI:IPI00947211 ProteinModelPortal:C9JXC9
STRING:C9JXC9 PRIDE:C9JXC9 Ensembl:ENST00000374819
ArrayExpress:C9JXC9 Bgee:C9JXC9 Uniprot:C9JXC9
Length = 181
Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>MGI|MGI:1925927 [details] [associations]
symbol:Rnf20 "ring finger protein 20" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0002039
"p53 binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IMP] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030336 "negative regulation of
cell migration" evidence=ISO] [GO:0031062 "positive regulation of
histone methylation" evidence=IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISO] [GO:0033503 "HULC complex"
evidence=ISO] [GO:0033523 "histone H2B ubiquitination"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1925927 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0030336 GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907
GO:GO:0016574 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 CTD:56254 GeneTree:ENSGT00390000002866
HOVERGEN:HBG080312 OMA:KQDSEDL OrthoDB:EOG49W2DV GO:GO:0033503
EMBL:AK220492 EMBL:AL732521 EMBL:BC052482 EMBL:AK048862
EMBL:AK051278 EMBL:AK053783 EMBL:AK076501 EMBL:AK085436
EMBL:AK139883 IPI:IPI00380766 IPI:IPI00648519 RefSeq:NP_001156735.1
RefSeq:NP_892044.1 UniGene:Mm.24765 ProteinModelPortal:Q5DTM8
SMR:Q5DTM8 STRING:Q5DTM8 PhosphoSite:Q5DTM8 PaxDb:Q5DTM8
PRIDE:Q5DTM8 Ensembl:ENSMUST00000029989 Ensembl:ENSMUST00000167496
GeneID:109331 KEGG:mmu:109331 UCSC:uc008swa.2 UCSC:uc012dec.1
InParanoid:A2AIR3 NextBio:361921 Bgee:Q5DTM8 CleanEx:MM_RNF20
Genevestigator:Q5DTM8 GermOnline:ENSMUSG00000028309 GO:GO:0031062
Uniprot:Q5DTM8
Length = 973
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>RGD|1311936 [details] [associations]
symbol:Rnf20 "ring finger protein 20, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin
ligase complex" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0030336 "negative regulation of
cell migration" evidence=IEA;ISO] [GO:0031062 "positive regulation
of histone methylation" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0033503 "HULC
complex" evidence=IEA;ISO] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
RGD:1311936 Prosite:PS00518 GO:GO:0045893 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 InterPro:IPR017907 KO:K10696 GO:GO:0033523
GO:GO:0010390 CTD:56254 GeneTree:ENSGT00390000002866
OrthoDB:EOG49W2DV GO:GO:0033503 IPI:IPI00367304
RefSeq:NP_001101399.2 ProteinModelPortal:D3ZYQ9 PRIDE:D3ZYQ9
Ensembl:ENSRNOT00000059869 GeneID:313216 KEGG:rno:313216
UCSC:RGD:1311936 ArrayExpress:D3ZYQ9 Uniprot:D3ZYQ9
Length = 973
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQSKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|A2VDP1 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9913 "Bos taurus" [GO:0033503 "HULC complex" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0010390 "histone monoubiquitination" evidence=ISS] [GO:0030336
"negative regulation of cell migration" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0031062 "positive
regulation of histone methylation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030336 GO:GO:0003713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842
GO:GO:0042393 GO:GO:0000209 InterPro:IPR017907 GO:GO:0031625
GO:GO:0002039 eggNOG:NOG263074 KO:K10696 GO:GO:0033523
GO:GO:0010390 EMBL:BC133334 IPI:IPI00690596 RefSeq:NP_001075056.1
UniGene:Bt.10397 ProteinModelPortal:A2VDP1 PRIDE:A2VDP1
Ensembl:ENSBTAT00000012521 GeneID:513326 KEGG:bta:513326 CTD:56254
GeneTree:ENSGT00390000002866 HOGENOM:HOG000231526
HOVERGEN:HBG080312 InParanoid:A2VDP1 OMA:KQDSEDL OrthoDB:EOG49W2DV
NextBio:20870814 ArrayExpress:A2VDP1 GO:GO:0033503 Uniprot:A2VDP1
Length = 975
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|F6XUF9 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 CTD:56254 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:AAEX03008005 Ensembl:ENSCAFT00000004109
EMBL:AAEX03008004 RefSeq:XP_532018.3 GeneID:474788 KEGG:cfa:474788
Uniprot:F6XUF9
Length = 975
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|Q5VTR2 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0031062 "positive regulation of histone methylation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0010390 "histone monoubiquitination"
evidence=IDA] [GO:0033523 "histone H2B ubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0002039 "p53 binding" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0033503 "HULC
complex" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0042393 EMBL:AL353621 GO:GO:0000209
InterPro:IPR017907 GO:GO:0002039 eggNOG:NOG263074 KO:K10696
GO:GO:0033523 GO:GO:0010390 CTD:56254 HOVERGEN:HBG080312
OMA:KQDSEDL OrthoDB:EOG49W2DV GO:GO:0033503 EMBL:AF265230
EMBL:AK000389 EMBL:AK000697 EMBL:AK002051 EMBL:AK022300
EMBL:AK022532 EMBL:AK314401 EMBL:AL591377 EMBL:BC063115
EMBL:BC110584 EMBL:BC110585 EMBL:BC152309 EMBL:AL832910
EMBL:AL834272 IPI:IPI00251559 RefSeq:NP_062538.5 UniGene:Hs.729085
ProteinModelPortal:Q5VTR2 SMR:Q5VTR2 IntAct:Q5VTR2 STRING:Q5VTR2
PhosphoSite:Q5VTR2 DMDM:84027766 PaxDb:Q5VTR2 PRIDE:Q5VTR2
Ensembl:ENST00000389120 GeneID:56254 KEGG:hsa:56254 UCSC:uc004bbn.3
GeneCards:GC09P104296 HGNC:HGNC:10062 HPA:CAB012478 MIM:607699
neXtProt:NX_Q5VTR2 PharmGKB:PA34427 ChiTaRS:RNF20 GenomeRNAi:56254
NextBio:61893 ArrayExpress:Q5VTR2 Bgee:Q5VTR2 Genevestigator:Q5VTR2
GermOnline:ENSG00000155827 Uniprot:Q5VTR2
Length = 975
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|F1SSB0 [details] [associations]
symbol:LOC100154259 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10696 GeneTree:ENSGT00390000002866
OMA:KQDSEDL EMBL:CU313312 RefSeq:XP_001926629.2
Ensembl:ENSSSCT00000005942 GeneID:100154259 KEGG:ssc:100154259
Uniprot:F1SSB0
Length = 975
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|E2QZB1 [details] [associations]
symbol:RNF20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0033523 "histone H2B ubiquitination"
evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031062
"positive regulation of histone methylation" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0045893 GO:GO:0005730 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GO:GO:0033503 Ensembl:ENSCAFT00000004109
Uniprot:E2QZB1
Length = 977
Score = 125 (49.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L ++VN
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIVN 94
>UNIPROTKB|F1N9A6 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0031062 "positive regulation of histone
methylation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0033503 "HULC complex" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030336
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0033523
GO:GO:0010390 GeneTree:ENSGT00390000002866 OMA:KQDSEDL
GO:GO:0033503 IPI:IPI00593729 EMBL:AADN02074604 EMBL:AADN02074605
EMBL:AADN02074606 EMBL:AADN02074607 EMBL:AADN02074608
Ensembl:ENSGALT00000025065 Uniprot:F1N9A6
Length = 984
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +++N
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIIN 94
>UNIPROTKB|Q5ZLS3 [details] [associations]
symbol:RNF20 "E3 ubiquitin-protein ligase BRE1A"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0033503 "HULC complex" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG263074 KO:K10696 CTD:56254
HOGENOM:HOG000231526 HOVERGEN:HBG080312 OrthoDB:EOG49W2DV
GO:GO:0033503 EMBL:AJ719661 IPI:IPI00593729 RefSeq:NP_001026605.1
UniGene:Gga.42047 ProteinModelPortal:Q5ZLS3 STRING:Q5ZLS3
PRIDE:Q5ZLS3 GeneID:427310 KEGG:gga:427310 InParanoid:Q5ZLS3
NextBio:20828591 Uniprot:Q5ZLS3
Length = 984
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 1 MDIKVLQFQNKKLAQRLEQKNRAEAELRSRIEQLEKRQTQDDAVLNVVVN 50
+DI+ LQ +N+KLA+ L+Q+ E ELR IE+LE+RQ DDA L +++N
Sbjct: 46 LDIRTLQTKNRKLAEMLDQRQAIEDELREHIEKLERRQATDDASL-LIIN 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 65 65 0.00091 102 3 10 22 0.38 28
29 0.46 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 481 (51 KB)
Total size of DFA: 92 KB (2068 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.95u 0.17s 16.12t Elapsed: 00:00:01
Total cpu time: 15.95u 0.17s 16.12t Elapsed: 00:00:01
Start: Thu Aug 15 14:14:06 2013 End: Thu Aug 15 14:14:07 2013