BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4022
(222 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 356
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 35/202 (17%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L + K+FDSS + FKF+LG+G+VIKGWD G+ MK G TIP
Sbjct: 31 DEVEVHYTGTL-LDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPP 89
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKN-ISVYYVGK--------LKSNNQ---------- 150
+AYG GSPP IP N+TL FDVEL + SV + K LK ++
Sbjct: 90 ELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEV 149
Query: 151 ------QFDSST---QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKG 201
+ + T + G +F + G + + MK G K + + +G G
Sbjct: 150 FVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMG 209
Query: 202 SPP-----AIPPNSTLVFDVEL 218
P A+PPN++LV D+EL
Sbjct: 210 RPAAGEGGAVPPNASLVIDLEL 231
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 42/188 (22%)
Query: 72 TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPA-----IPPNS 126
++ G +F + G + + MK G K + + +G G P A +PPN+
Sbjct: 164 SKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNA 223
Query: 127 TLVFDVELKN--------------------------------ISVYYVGKLKSNNQQFDS 154
+LV D+EL + ++V GKL+
Sbjct: 224 SLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKK 283
Query: 155 --STQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS--PPAIPPNS 210
Q P F+F+ + VI+G D + MK G +TIP AYG+ S +PPNS
Sbjct: 284 GHDEQEP-FEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNS 342
Query: 211 TLVFDVEL 218
T++++VEL
Sbjct: 343 TVIYEVEL 350
>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
pdb|3JYM|B Chain B, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 377
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 35/202 (17%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L + K+FDSS + FKF+LG+G+VIKGWD G+ MK G TIP
Sbjct: 47 DEVEVHYTGTL-LDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPP 105
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKN-ISVYYVGK--------LKSNNQ---------- 150
+AYG GSPP IP N+TL FDVEL + SV + K LK ++
Sbjct: 106 ELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEV 165
Query: 151 ------QFDSST---QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKG 201
+ + T + G +F + G + + MK G K + + +G G
Sbjct: 166 FVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMG 225
Query: 202 SPP-----AIPPNSTLVFDVEL 218
P A+PPN++LV D+EL
Sbjct: 226 RPAAGEGGAVPPNASLVIDLEL 247
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 42/188 (22%)
Query: 72 TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPA-----IPPNS 126
++ G +F + G + + MK G K + + +G G P A +PPN+
Sbjct: 180 SKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNA 239
Query: 127 TLVFDVELKN--------------------------------ISVYYVGKLKSNNQQFDS 154
+LV D+EL + ++V GKL+
Sbjct: 240 SLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKK 299
Query: 155 --STQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS--PPAIPPNS 210
Q P F+F+ + VI+G D + MK G +TIP AYG+ S +PPNS
Sbjct: 300 GHDEQEP-FEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNS 358
Query: 211 TLVFDVEL 218
T++++VEL
Sbjct: 359 TVIYEVEL 366
>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With A G95a Surface Mutation From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 182 QLGYGARGAAGVIPPNATLVFEVELLDV 209
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 182 QLGYGARGAAGVIPPNATLVFEVELLDV 209
>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation A54e From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F+F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFEFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+SV+Y G L ++ ++FDSS + F+F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFEFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ3|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 93.6 bits (231), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 27 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGHVIKGWDEGVQGMKVGGVRRLTIPP 85
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 86 QLGYGARGAGGVIPPNATLVFEVELLDV 113
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 52 NISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 110
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 28 TVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGHVIKGWDEGVQGMKVGGVRRLTIPPQ 86
Query: 111 MAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 87 LGYGARGAGGVIPPNATLVFEVELLDV 113
>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation V3i From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|D Chain D, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
Length = 209
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|2Y78|A Chain A, Crystal Structure Of Bpss1823, A Mip-Like Chaperone From
Burkholderia Pseudomallei
Length = 133
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 47 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 105
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 106 QLGYGARGAGGVIPPNATLVFEVELLDV 133
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
+ +SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+T
Sbjct: 44 RAGQTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
IP + YG +G+ IPPN+TLVF+VEL ++
Sbjct: 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133
>pdb|2KE0|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei
pdb|2KO7|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
Cycloheximide-N- Ethylethanoate
pdb|2L2S|A Chain A, Solution Structure Of Peptidyl-Prolyl Cis-Trans Isomerase
From Burkholderia Pseudomallei Complexed With
1-{[(4-Methylphenyl) Thio]acetyl}piperidine
Length = 117
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 31 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 89
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 90 QLGYGARGAGGVIPPNATLVFEVELLDV 117
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 52 NISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 110
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 32 TVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQ 90
Query: 111 MAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 91 LGYGARGAGGVIPPNATLVFEVELLDV 117
>pdb|1YAT|A Chain A, Improved Calcineurin Inhibition By Yeast Fkbp12-Drug
Complexes. Crystallographic And Functional Analysis
Length = 113
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSST-QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
++++Y G L+ N Q+FDSS +G F+ +G G+VIKGWDVG+ + VG K R+TIP
Sbjct: 28 VTIHYTGTLE-NGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPY 86
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNVN 222
AYG +G P IPPNSTLVFDVEL VN
Sbjct: 87 AYGPRGFPGLIPPNSTLVFDVELLKVN 113
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 53 ISVYYVGKLKSNNKQFDSST-QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
++++Y G L+ N ++FDSS +G F+ +G G+VIKGWDVG+ + VG K R+TIP
Sbjct: 28 VTIHYTGTLE-NGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPY 86
Query: 112 AYGNKGSPPAIPPNSTLVFDVELKNIS 138
AYG +G P IPPNSTLVFDVEL ++
Sbjct: 87 AYGPRGFPGLIPPNSTLVFDVELLKVN 113
>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl
Cis-Trans Isomerase From Giardia Lamblia, Seattle
Structural Genomics Center For Infectious Disease Target
Gilaa.00840.A
Length = 130
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
K ++V+Y G+ + +QFDSS ++G F+F LG GEVIKGWD G+ M +G K TIP
Sbjct: 44 KKVTVHYDGRF-PDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPY 102
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+AYG +G PP IPP +TLVF+VEL V
Sbjct: 103 QLAYGERGYPPVIPPKATLVFEVELLAV 130
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Query: 52 NISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 110
++V+Y G+ + KQFDSS ++G F+F LG GEVIKGWD G+ M +G K TIP
Sbjct: 45 KVTVHYDGRF-PDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQ 103
Query: 111 MAYGNKGSPPAIPPNSTLVFDVELKNI 137
+AYG +G PP IPP +TLVF+VEL +
Sbjct: 104 LAYGERGYPPVIPPKATLVFEVELLAV 130
>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Fk506
pdb|4FN2|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4FN2|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4G50|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4G50|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4GIV|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
pdb|4GIV|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
Length = 209
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+F SS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWL-TDGQKFGSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 181
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG +G+ IPPN+TLVF+VEL +V
Sbjct: 182 QLGYGARGAGGVIPPNATLVFEVELLDV 209
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 56/87 (64%)
Query: 51 SNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 110
+SV+Y G L K S + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 123 QTVSVHYTGWLTDGQKFGSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQ 182
Query: 111 MAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG +G+ IPPN+TLVF+VEL ++
Sbjct: 183 LGYGARGAGGVIPPNATLVFEVELLDV 209
>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52
Length = 280
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 41/206 (19%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L K FDSS + F F LGKGEVIK WD+ + MKVG IT
Sbjct: 71 DRVFVHYTGWLLDGTK-FDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP 129
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVEL-----------------KNISVYYVGKLKSN---- 148
AYG+ GSPP IPPN+TLVF+VEL + I G K N
Sbjct: 130 EYAYGSAGSPPKIPPNATLVFEVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAI 189
Query: 149 ----------NQQFDSSTQGPGFKFRLGKGEVIK---GWDVGLNGMKVGGKRRITIPAHM 195
++ FD +F +G+GE + G + + M+ G + +
Sbjct: 190 VEVALEGYYKDKLFDQRE----LRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSY 245
Query: 196 AYGNKGSPP-AIPPNSTLVFDVELKN 220
A+G+ G IPPN+ L +++ LK+
Sbjct: 246 AFGSVGKEKFQIPPNAELKYELHLKS 271
>pdb|2PBC|A Chain A, Fk506-Binding Protein 2
pdb|2PBC|B Chain B, Fk506-Binding Protein 2
pdb|2PBC|C Chain C, Fk506-Binding Protein 2
pdb|2PBC|D Chain D, Fk506-Binding Protein 2
Length = 102
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSST-QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
+K + ++Y GKL+ + +FDSS Q F F LG G+VIKGWD GL GM G KR++
Sbjct: 7 RKGDVLHMHYTGKLE-DGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLV 65
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVELKNIS 138
IP+ + YG +G+PP IP +TLVF+VEL I
Sbjct: 66 IPSELGYGERGAPPKIPGGATLVFEVELLKIE 97
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSST-QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ ++Y GKL+ + +FDSS Q F F LG G+VIKGWD GL GM G KR++ IP+ +
Sbjct: 12 LHMHYTGKLE-DGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSEL 70
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNVN 222
YG +G+PP IP +TLVF+VEL +
Sbjct: 71 GYGERGAPPKIPGGATLVFEVELLKIE 97
>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, Minimized Average Structure
pdb|1ROU|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, 22 Structures
Length = 149
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L K FDSS + F F LGKGEVIK WD+ + MKVG RIT
Sbjct: 50 DRVFVHYTGWLLDGTK-FDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKP 108
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 109 EYAYGSAGSPPKIPPNATLVFEVEL 133
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V+Y G L + +FDSS + F F LGKGEVIK WD+ + MKVG RIT
Sbjct: 51 RVFVHYTGWL-LDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPE 109
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 110 YAYGSAGSPPKIPPNATLVFEVEL 133
>pdb|3UQI|A Chain A, Crystallographic Structure Of Fkbp12 From Aedes Aegypti
pdb|2LPV|A Chain A, Solution Structure Of Fkbp12 From Aedes Aegypti
Length = 108
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 46 SYKKESNISV-YYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKR 103
+Y K ++V +Y G L ++ K FDSS T+G F+F +G+GEVI+GWD G+ M VG +
Sbjct: 15 TYPKAGQVAVVHYTGTL-ADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRA 73
Query: 104 RITIPAHMAYGNKGSPPAIPPNSTLVFDVELKNIS 138
++ AYG++G P IPPN+TL FDVEL +
Sbjct: 74 KLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE 108
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 139 VYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAY 197
V+Y G L ++ + FDSS T+G F+F +G+GEVI+GWD G+ M VG + ++ AY
Sbjct: 25 VHYTGTL-ADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAY 83
Query: 198 GNKGSPPAIPPNSTLVFDVELKNVN 222
G++G P IPPN+TL FDVEL V
Sbjct: 84 GSRGHPGVIPPNATLTFDVELLRVE 108
>pdb|4DZ2|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ2|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation R92g From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 135 KNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
+ +SV+Y G L ++ Q+FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 27 QTVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPP 85
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKNV 221
+ YG G+ IPPN+TLVF+VEL +V
Sbjct: 86 QLGYGAGGAGGVIPPNATLVFEVELLDV 113
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 52 NISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 110
+SV+Y G L ++ ++FDSS + F F LG G VIKGWD G+ GMKVGG RR+TIP
Sbjct: 28 TVSVHYTGWL-TDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQ 86
Query: 111 MAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ YG G+ IPPN+TLVF+VEL ++
Sbjct: 87 LGYGAGGAGGVIPPNATLVFEVELLDV 113
>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
pdb|1N1A|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
Length = 140
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L K FDSS + F F LGKGEVIK WD+ + MKVG IT
Sbjct: 51 DRVFVHYTGWLLDGTK-FDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP 109
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 110 EYAYGSAGSPPKIPPNATLVFEVEL 134
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V+Y G L + +FDSS + F F LGKGEVIK WD+ + MKVG IT
Sbjct: 52 RVFVHYTGWL-LDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPE 110
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 111 YAYGSAGSPPKIPPNATLVFEVEL 134
>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y G L K FDSS + F F LGKGEVIK WD+ + MKVG IT
Sbjct: 55 DRVFVHYTGWLLDGTK-FDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKP 113
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 114 EYAYGSAGSPPKIPPNATLVFEVEL 138
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V+Y G L + +FDSS + F F LGKGEVIK WD+ + MKVG IT
Sbjct: 56 RVFVHYTGWL-LDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPE 114
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GSPP IPPN+TLVF+VEL
Sbjct: 115 YAYGSAGSPPKIPPNATLVFEVEL 138
>pdb|1C9H|A Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin
Length = 107
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
KK V+Y G L+ N K+FDSS + FKFR+GK EVIKG++ G M +G + ++T
Sbjct: 17 KKGQTCVVHYTGMLQ-NGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVELKNIS 138
+AYG G P IPPN+TL+FDVEL N+
Sbjct: 76 CTPDVAYGATGHPGVIPPNATLIFDVELLNLE 107
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + + V+Y G L+ N ++FDSS + FKFR+GK EVIKG++ G
Sbjct: 6 TISPGDGRTFPKKGQTCVVHYTGMLQ-NGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVELKNVN 222
M +G + ++T +AYG G P IPPN+TL+FDVEL N+
Sbjct: 65 QMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE 107
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 31/198 (15%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 53 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCKPEY 111
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL---KNISVYYVG----KLKSNNQQFDSSTQGPGFK-- 162
AYG+ GS P IP N+TL F++EL K ++ G + K + + + +G +
Sbjct: 112 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH 171
Query: 163 ----------------FRLGKGE---VIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSP 203
F +G+GE + G D L M+ + + + +G G P
Sbjct: 172 LEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP 231
Query: 204 P-AIPPNSTLVFDVELKN 220
I PN+ L+++V LK+
Sbjct: 232 KFGIEPNAELIYEVTLKS 249
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
Length = 126
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSSTQ-GPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
KK + ++V+YVGKL+S+ K FDSS + FKF LG+GEVIKGWD+ + M K +
Sbjct: 34 KKGNEVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIKGWDICVASMTKNEKCSVR 93
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
+ + YG +G +IP NS L+F++EL
Sbjct: 94 LDSKYGYGEEGCGESIPGNSVLIFEIEL 121
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 136 NISVYYVGKLKSNNQQFDSSTQ-GPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
++V+YVGKL+S+ + FDSS + FKF LG+GEVIKGWD+ + M K + + +
Sbjct: 38 EVTVHYVGKLESSGKVFDSSRERNVPFKFHLGQGEVIKGWDICVASMTKNEKCSVRLDSK 97
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
YG +G +IP NS L+F++EL
Sbjct: 98 YGYGEEGCGESIPGNSVLIFEIEL 121
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
pdb|2VN1|B Chain B, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
Length = 129
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
KK + ++V+YVGKL+S K FDSS + FKF L +GEVIKGWD+ ++ M+ K +
Sbjct: 35 KKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVR 94
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I + YG++G +IP NS L+F++EL
Sbjct: 95 IESMYGYGDEGCGESIPGNSVLLFEIEL 122
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
++V+YVGKL+S + FDSS + FKF L +GEVIKGWD+ ++ M+ K + I +
Sbjct: 39 EVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESM 98
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
YG++G +IP NS L+F++EL
Sbjct: 99 YGYGDEGCGESIPGNSVLLFEIEL 122
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35
From Plasmodium Falciparum
Length = 135
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
KK + ++V+YVGKL+S K FDSS + FKF L +GEVIKGWD+ ++ M+ K +
Sbjct: 35 KKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVR 94
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I + YG++G +IP NS L+F++EL
Sbjct: 95 IESMYGYGDEGCGESIPGNSVLLFEIEL 122
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
++V+YVGKL+S + FDSS + FKF L +GEVIKGWD+ ++ M+ K + I +
Sbjct: 39 EVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVRIESM 98
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
YG++G +IP NS L+F++EL
Sbjct: 99 YGYGDEGCGESIPGNSVLLFEIEL 122
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
pdb|3O5D|B Chain B, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
Length = 264
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 31/198 (15%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 57 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 115
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL---KNISVYYVG----KLKSNNQQFDSSTQGPGFK-- 162
AYG+ GS P IP N+TL F++EL K ++ G + K + + + +G +
Sbjct: 116 AYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIH 175
Query: 163 ----------------FRLGKGE---VIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSP 203
F +G+GE + G D L M+ + + + +G G P
Sbjct: 176 LEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP 235
Query: 204 P-AIPPNSTLVFDVELKN 220
I PN+ L+++V LK+
Sbjct: 236 KFGIEPNAELIYEVTLKS 253
>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding
Protein
pdb|1FKL|A Chain A, Atomic Structure Of Fkbp12-Rapaymycin, An Immunophilin-
Immunosuppressant Complex
Length = 107
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPPN+TL+FDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPNATLIFDVEL 103
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPPN+TL+FDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVEL 103
>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp-
12 Complex
pdb|1FKG|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKH|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
pdb|1FKI|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKI|B Chain B, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
Length = 107
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
pdb|3MDY|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 109
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 19 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT 77
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 78 ISPDYAYGATGHPGIIPPHATLVFDVEL 105
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 8 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVA 66
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 67 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 105
>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With
Huma
pdb|1B6C|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|E Chain E, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|G Chain G, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1QPF|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPF|D Chain D, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPL|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1QPL|C Chain C, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1D6O|A Chain A, Native Fkbp
pdb|1D6O|B Chain B, Native Fkbp
pdb|1D7H|A Chain A, Fkbp Complexed With Dmso
pdb|1D7H|B Chain B, Fkbp Complexed With Dmso
pdb|1D7I|A Chain A, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7I|B Chain B, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7J|A Chain A, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|1D7J|B Chain B, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|3FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|4FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|1J4R|A Chain A, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|B Chain B, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|D Chain D, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4H|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000107 Small Molecule
pdb|1J4I|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000308 Small Molecule
pdb|2DG3|A Chain A, Wildtype Fk506-Binding Protein Complexed With Rapamycin
pdb|1FKD|A Chain A, Fk-506 Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1FKF|A Chain A, Atomic Structure Of Fkbp-Fk506, An
Immunophilin-Immunosuppressant Complex
pdb|1FKJ|A Chain A, Atomic Structure Of Fkbp12-Fk506, An Immunophilin
Immunosuppressant Complex
pdb|2FKE|A Chain A, Fk-506-Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1F40|A Chain A, Solution Structure Of Fkbp12 Complexed With Gpi-1046, A
Neurotrophic Ligand
pdb|1FKR|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKS|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKT|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|2PPN|A Chain A, Crystal Structure Of Fkbp12
pdb|1A7X|A Chain A, Fkbp12-Fk1012 Complex
pdb|1A7X|B Chain B, Fkbp12-Fk1012 Complex
pdb|4DH0|A Chain A, X-Ray Crystal Structure Of 28-O-Methylrapamycin Complexed
With Fkbp12: Is The Cyclohexyl Moiety Part Of The
Effector Domain Of Rapamycin?
pdb|2RSE|A Chain A, Nmr Structure Of Fkbp12-Mtor Frb Domain-Rapamycin Complex
Structure Determined Based On Pcs
pdb|1NSG|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
Length = 107
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex
pdb|1EYM|B Chain B, Fk506 Binding Protein Mutant, Homodimeric Complex
Length = 107
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITI 107
K+ V+Y G L+ K S + FKF LGK EVI+GW+ G+ M VG + ++TI
Sbjct: 17 KRGQTCVVHYTGMLEDGKKMDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76
Query: 108 PAHMAYGNKGSPPAIPPNSTLVFDVEL 134
AYG G P IPP++TLVFDVEL
Sbjct: 77 SPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNG 180
I P F + V+Y G L+ + S + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLEDGKKMDSSRDRNKPFKFMLGKQEVIRGWEEGVAQ 65
Query: 181 MKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl
Isomerase
Length = 135
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ + V+YVG L+ N +FDSS +G F F LG+G VIKGWD+G+ M G TI +
Sbjct: 34 TTVKVHYVGTLE-NGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRS 92
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVEL 134
YG+ GSPP IP +TL+F+VEL
Sbjct: 93 DYGYGDAGSPPKIPGGATLIFEVEL 117
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V+YVG L+ N +FDSS +G F F LG+G VIKGWD+G+ M G TI +
Sbjct: 35 TVKVHYVGTLE-NGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSD 93
Query: 195 MAYGNKGSPPAIPPNSTLVFDVEL 218
YG+ GSPP IP +TL+F+VEL
Sbjct: 94 YGYGDAGSPPKIPGGATLIFEVEL 117
>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH
Immunosuppressant Fk506
Length = 107
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDKNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGVPGIIPPHATLVFDVEL 103
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDKNKPFKFMLGKQEVIRGWEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGVPGIIPPHATLVFDVEL 103
>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12
Length = 107
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWQEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWQEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
pdb|1BL4|B Chain B, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
Length = 107
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITI 107
K+ V+Y G L+ K S + FKF LGK EVI+GW+ G+ M VG + ++TI
Sbjct: 17 KRGQTCVVHYTGMLEDGKKVDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTI 76
Query: 108 PAHMAYGNKGSPPAIPPNSTLVFDVEL 134
AYG G P IPP++TLVFDVEL
Sbjct: 77 SPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNG 180
I P F + V+Y G L+ + S + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKPFKFMLGKQEVIRGWEEGVAQ 65
Query: 181 MKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 66 MSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 107
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K V+Y G L+ + K+FDSS + FKF LGK EVI+GW+ G+ M VG + ++T
Sbjct: 17 KAGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW+ G+
Sbjct: 6 TISPGDGRTFPKAGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12
Length = 107
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+GW G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWAEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+GW G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGWAEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 31/200 (15%)
Query: 51 SNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 109
+ V+Y GKL +N K+FDSS + F F +GKG+VIK WD+G+ MK G +
Sbjct: 51 DRVYVHYNGKL-ANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKP 109
Query: 110 HMAYGNKGSPPAIPPNSTLVFDVELKNISVY-------YVGKLKSNNQQFDSSTQGPGFK 162
AYG GS P IP N+TL F+VEL + + + K + + + +G +
Sbjct: 110 EYAYGATGSLPKIPSNATLFFEVELLDFKGEDLLEDGGIIRRTKRRGEGYSNPNEGARVQ 169
Query: 163 ------------------FRLGKGE---VIKGWDVGLNGMKVGGKRRITIPAHMAYGNKG 201
F +G+GE + G D L M+ + + + +G G
Sbjct: 170 IHLEGRCGGRVFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILHLGPRYGFGEAG 229
Query: 202 SPP-AIPPNSTLVFDVELKN 220
P I PN+ L+++V LK+
Sbjct: 230 KPKFGIEPNAELIYEVTLKS 249
>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin
Length = 107
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+G++ G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGFEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+G++ G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGFEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|1U79|A Chain A, Crystal Structure Of Atfkbp13
pdb|1U79|B Chain B, Crystal Structure Of Atfkbp13
pdb|1U79|C Chain C, Crystal Structure Of Atfkbp13
pdb|1U79|D Chain D, Crystal Structure Of Atfkbp13
pdb|1U79|E Chain E, Crystal Structure Of Atfkbp13
pdb|1Y0O|A Chain A, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|B Chain B, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|C Chain C, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|D Chain D, Crystal Structure Of Reduced Atfkbp13
pdb|1Y0O|E Chain E, Crystal Structure Of Reduced Atfkbp13
Length = 129
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 20/104 (19%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNG------MKVGGKRRI 105
I +YVGKL+ N K FDSS +G FR+G GEVIKGWD G+ G M GGKR +
Sbjct: 33 IKAHYVGKLE-NGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTL 91
Query: 106 TIPAHMAYGN-----KGSPPAIPPNSTLVFDVELKNISVYYVGK 144
IP +AYG+ KG IPP S L+FD+E Y+GK
Sbjct: 92 RIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE-------YIGK 128
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Query: 137 ISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNG------MKVGGKRRI 189
I +YVGKL+ N + FDSS +G FR+G GEVIKGWD G+ G M GGKR +
Sbjct: 33 IKAHYVGKLE-NGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTL 91
Query: 190 TIPAHMAYGN-----KGSPPAIPPNSTLVFDVE 217
IP +AYG+ KG IPP S L+FD+E
Sbjct: 92 RIPPELAYGDRGAGCKGGSCLIPPASVLLFDIE 124
>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin
Length = 107
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K+ V+Y G L+ + K+FDSS + FKF LGK EVI+G + G+ M VG + ++T
Sbjct: 17 KRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGLEEGVAQMSVGQRAKLT 75
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVEL 134
I AYG G P IPP++TLVFDVEL
Sbjct: 76 ISPDYAYGATGHPGIIPPHATLVFDVEL 103
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 121 AIPPNSTLVFDVELKNISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLN 179
I P F + V+Y G L+ + ++FDSS + FKF LGK EVI+G + G+
Sbjct: 6 TISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRNKPFKFMLGKQEVIRGLEEGVA 64
Query: 180 GMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVEL 218
M VG + ++TI AYG G P IPP++TLVFDVEL
Sbjct: 65 QMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVEL 103
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi
pdb|3O5F|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vii
Length = 144
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 57 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 115
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GS P IP N+TL F++EL
Sbjct: 116 AYGSAGSLPKIPSNATLFFEIEL 138
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ V+Y GKL SN ++FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 57 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 115
Query: 196 AYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GS P IP N+TL F++EL
Sbjct: 116 AYGSAGSLPKIPSNATLFFEIEL 138
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I
pdb|3O5I|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5I|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5J|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Iii
pdb|3O5K|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|C Chain C, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|D Chain D, Fk1 Domain Of Fkbp51, Crystal Form Viii
Length = 128
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 41 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 99
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GS P IP N+TL F++EL
Sbjct: 100 AYGSAGSLPKIPSNATLFFEIEL 122
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ V+Y GKL SN ++FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 41 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 99
Query: 196 AYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GS P IP N+TL F++EL
Sbjct: 100 AYGSAGSLPKIPSNATLFFEIEL 122
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRH|D Chain D, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRI|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 57 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 115
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GS P IP N+TL F++EL
Sbjct: 116 AYGSAGSLPKIPSNATLFFEIEL 138
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ V+Y GKL SN ++FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 57 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 115
Query: 196 AYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GS P IP N+TL F++EL
Sbjct: 116 AYGSAGSLPKIPSNATLFFEIEL 138
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I
pdb|3O5M|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5M|B Chain B, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5O|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iii
pdb|3O5P|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv
pdb|3O5Q|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv, In
Presence Of Dmso
pdb|3O5R|A Chain A, Complex Of Fk506 With The Fk1 Domain Mutant A19t Of Fkbp51
pdb|4DRQ|A Chain A, Exploration Of Pipecolate Sulfonamides As Binders Of The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-1-((S)-1-(3,5-
Dichlorophenylsulfonyl)piperidine-2-Carbonyloxy)-3-(3,
4-Dimethoxy - Phenyl)propyl)phenoxy)acetic Acid
pdb|4DRK|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRK|B Chain B, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRM|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRN|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRO|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
(1r)-3-(3,4-Dimethoxyphenyl)-1- Phenylpropyl
(2s)-1-{[(1r,2s)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidine-2-Carboxylate
pdb|4DRP|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-3-(3,4-
Dimethoxyphenyl)-1-((S)-1-(2-((1r,
2s)-2-Ethyl-1-Hydroxy-Cyclohexyl)-
2-Oxoacetyl)piperidine-2-
Carbonyloxy)propyl)phenoxy)acetic Acid From
Cocrystallization
Length = 128
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 53 ISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V+Y GKL SN K+FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 41 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 99
Query: 112 AYGNKGSPPAIPPNSTLVFDVEL 134
AYG+ GS P IP N+TL F++EL
Sbjct: 100 AYGSAGSLPKIPSNATLFFEIEL 122
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ V+Y GKL SN ++FDSS + F F LGKG+VIK WD+G+ MK G +
Sbjct: 41 VYVHYKGKL-SNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEY 99
Query: 196 AYGNKGSPPAIPPNSTLVFDVEL 218
AYG+ GS P IP N+TL F++EL
Sbjct: 100 AYGSAGSLPKIPSNATLFFEIEL 122
>pdb|4DIP|A Chain A, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|B Chain B, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|C Chain C, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|D Chain D, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|E Chain E, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|F Chain F, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|G Chain G, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|H Chain H, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|I Chain I, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
pdb|4DIP|J Chain J, Crystal Structure Of Human Peptidyl-Prolyl Cis-Trans
Isomerase Fkbp14
Length = 125
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 24 SMAAL--DPKSITGKIHHIFLLSLSYKKESNISVYYVGKLKSNNKQFDSSTQ---GPGFK 78
SM AL +P+ + F+ K + V+Y G L+ + F S+ + G
Sbjct: 4 SMGALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIW 63
Query: 79 FRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
F LG E +KGWD GL GM VG KR++ IP + YG +G IPP STL+F+++L I
Sbjct: 64 FTLGILEALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGK-GKIPPESTLIFNIDLLEI 121
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 139 VYYVGKLKSNNQQFDSSTQ---GPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
V+Y G L+ + F S+ + G F LG E +KGWD GL GM VG KR++ IP +
Sbjct: 37 VHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKRKLIIPPAL 96
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNVN 222
YG +G IPP STL+F+++L +
Sbjct: 97 GYGKEGK-GKIPPESTLIFNIDLLEIR 122
>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25
Length = 116
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSSTQGPGFK--------FRLGKGEVIKGWDVGLNGMKV 99
KK + +Y G L+ + FD++ Q K F++G G+VI+GWD L M
Sbjct: 18 KKGDVVHCWYTGTLQ-DGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSK 76
Query: 100 GGKRRITIPAHMAYGNKGSPPA-IPPNSTLVFDVELKNIS 138
G K R+ I AYG KG P A IPPN+ L F+VEL +I
Sbjct: 77 GEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID 116
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQGPGFK--------FRLGKGEVIKGWDVGLNGMKVGGKRR 188
+ +Y G L+ + FD++ Q K F++G G+VI+GWD L M G K R
Sbjct: 23 VHCWYTGTLQ-DGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKAR 81
Query: 189 ITIPAHMAYGNKGSPPA-IPPNSTLVFDVELKNVN 222
+ I AYG KG P A IPPN+ L F+VEL +++
Sbjct: 82 LEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDID 116
>pdb|3KZ7|A Chain A, C-Terminal Domain Of Murine Fkbp25 Rapamycin Complex
Length = 119
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSSTQGPGFK--------FRLGKGEVIKGWDVGLNGMKV 99
KK + +Y G L + FD++ Q K F++G G+VI+GWD L M
Sbjct: 21 KKGDVVHCWYTGTL-PDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSK 79
Query: 100 GGKRRITIPAHMAYGNKGSPPA-IPPNSTLVFDVELKNIS 138
G K R+ I AYG KG P A IPPN+ L+F+VEL +I
Sbjct: 80 GEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQGPGFK--------FRLGKGEVIKGWDVGLNGMKVGGKRR 188
+ +Y G L + FD++ Q K F++G G+VI+GWD L M G K R
Sbjct: 26 VHCWYTGTL-PDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKAR 84
Query: 189 ITIPAHMAYGNKGSPPA-IPPNSTLVFDVELKNVN 222
+ I AYG KG P A IPPN+ L+F+VEL +++
Sbjct: 85 LEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119
>pdb|3OE2|A Chain A, 1.6 A Crystal Structure Of Peptidyl-Prolyl Cis-Trans
Isomerase Ppiase From Pseudomonas Syringae Pv. Tomato
Str. Dc3000 (Pspto Dc3000)
Length = 219
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 52 NISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 111
+ V YVG+L + K FD STQ F+ VI GW L M G K R+ IP+
Sbjct: 137 RVEVRYVGRL-PDGKIFDQSTQPQWFRL----DSVISGWTSALQNMPTGAKWRLVIPSDQ 191
Query: 112 AYGNKGSPPAIPPNSTLVFDVELKNIS 138
AYG +G+ I P + LVF++EL +S
Sbjct: 192 AYGAEGAGDLIDPFTPLVFEIELIAVS 218
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 136 NISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
+ V YVG+L + + FD STQ F+ VI GW L M G K R+ IP+
Sbjct: 137 RVEVRYVGRL-PDGKIFDQSTQPQWFRL----DSVISGWTSALQNMPTGAKWRLVIPSDQ 191
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNVN 222
AYG +G+ I P + LVF++EL V+
Sbjct: 192 AYGAEGAGDLIDPFTPLVFEIELIAVS 218
>pdb|1Q6U|A Chain A, Crystal Structure Of Fkpa From Escherichia Coli
Length = 245
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K + V Y G L + K+FD+S T+G FRL VI GW GL +K GGK ++
Sbjct: 137 KDSDTVVVNYKGTL-IDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLV 193
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
IP +AYG G P IPPNSTLVFDVEL ++
Sbjct: 194 IPPELAYGKAGV-PGIPPNSTLVFDVELLDV 223
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V Y G L + ++FD+S T+G FRL VI GW GL +K GGK ++ IP
Sbjct: 141 TVVVNYKGTL-IDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLVIPPE 197
Query: 195 MAYGNKGSPPAIPPNSTLVFDVELKNV 221
+AYG G P IPPNSTLVFDVEL +V
Sbjct: 198 LAYGKAGV-PGIPPNSTLVFDVELLDV 223
>pdb|1Q6H|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6H|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli
pdb|1Q6I|A Chain A, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
pdb|1Q6I|B Chain B, Crystal Structure Of A Truncated Form Of Fkpa From
Escherichia Coli, In Complex With Immunosuppressant
Fk506
Length = 224
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 48 KKESNISVYYVGKLKSNNKQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRIT 106
K + V Y G L + K+FD+S T+G FRL VI GW GL +K GGK ++
Sbjct: 137 KDSDTVVVNYKGTL-IDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLV 193
Query: 107 IPAHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
IP +AYG G P IPPNSTLVFDVEL ++
Sbjct: 194 IPPELAYGKAGV-PGIPPNSTLVFDVELLDV 223
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 136 NISVYYVGKLKSNNQQFDSS-TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAH 194
+ V Y G L + ++FD+S T+G FRL VI GW GL +K GGK ++ IP
Sbjct: 141 TVVVNYKGTL-IDGKEFDNSYTRGEPLSFRLDG--VIPGWTEGLKNIKKGGKIKLVIPPE 197
Query: 195 MAYGNKGSPPAIPPNSTLVFDVELKNV 221
+AYG G P IPPNSTLVFDVEL +V
Sbjct: 198 LAYGKAGV-PGIPPNSTLVFDVELLDV 223
>pdb|1JVW|A Chain A, Trypanosoma Cruzi Macrophage Infectivity Potentiator
(Tcmip)
Length = 167
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 50 ESNISVYYVGKLKSNNKQFDSSTQ-GPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIP 108
+ V+Y G+L+ + FDSS + G FR EVIKGW L M+ G + R+ IP
Sbjct: 56 DDKCEVHYTGRLR-DGTVFDSSRERGKPTTFR--PNEVIKGWTEALQLMREGDRWRLFIP 112
Query: 109 AHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+AYG G IPP S L FDVEL +I
Sbjct: 113 YDLAYGVTGGGGMIPPYSPLEFDVELISI 141
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQ-GPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
V+Y G+L+ + FDSS + G FR EVIKGW L M+ G + R+ IP +
Sbjct: 59 CEVHYTGRLR-DGTVFDSSRERGKPTTFR--PNEVIKGWTEALQLMREGDRWRLFIPYDL 115
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNV 221
AYG G IPP S L FDVEL ++
Sbjct: 116 AYGVTGGGGMIPPYSPLEFDVELISI 141
>pdb|3B7X|A Chain A, Crystal Structure Of Human Fk506-Binding Protein 6
Length = 134
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 50 ESNISVYYVGKLKSNNKQFDSS--TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITI 107
++++ V Y G L+ ++ FDS+ + P +LG+ + G ++GL M+ G R
Sbjct: 44 DASVLVKYSGYLEHMDRPFDSNYFRKTPRL-MKLGEDITLWGMELGLLSMRRGELARFLF 102
Query: 108 PAHMAYGNKGSPPAIPPNSTLVFDVELKN 136
+ AYG G PP IPPN+T++F++EL +
Sbjct: 103 KPNYAYGTLGCPPLIPPNTTVLFEIELLD 131
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 136 NISVYYVGKLKSNNQQFDSS--TQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPA 193
++ V Y G L+ ++ FDS+ + P +LG+ + G ++GL M+ G R
Sbjct: 46 SVLVKYSGYLEHMDRPFDSNYFRKTPRL-MKLGEDITLWGMELGLLSMRRGELARFLFKP 104
Query: 194 HMAYGNKGSPPAIPPNSTLVFDVELKN 220
+ AYG G PP IPPN+T++F++EL +
Sbjct: 105 NYAYGTLGCPPLIPPNTTVLFEIELLD 131
>pdb|1IX5|A Chain A, Solution Structure Of The Methanococcus
Thermolithotrophicus Fkbp
Length = 151
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 15/78 (19%)
Query: 53 ISVYYVGKLKSNNKQFDSSTQGPG--------------FKFRLGKGEVIKGWDVGLNGMK 98
I V Y+GKL+S + FD+S + +F +G+G++I+G++ + M+
Sbjct: 8 IKVDYIGKLESGD-VFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDME 66
Query: 99 VGGKRRITIPAHMAYGNK 116
VG ++ + IPA AYGN+
Sbjct: 67 VGDEKTVKIPAEKAYGNR 84
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 15/78 (19%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQGPG--------------FKFRLGKGEVIKGWDVGLNGMK 182
I V Y+GKL+S + FD+S + +F +G+G++I+G++ + M+
Sbjct: 8 IKVDYIGKLESGDV-FDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDME 66
Query: 183 VGGKRRITIPAHMAYGNK 200
VG ++ + IPA AYGN+
Sbjct: 67 VGDEKTVKIPAEKAYGNR 84
>pdb|2AWG|A Chain A, Structure Of The Ppiase Domain Of The Human Fk506-Binding
Protein 8
Length = 118
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 73 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDV 132
+ P F LG +VI+ D+ + M VG +T + YG +G P IPP++ L +V
Sbjct: 52 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEV 111
Query: 133 ELKN 136
LK
Sbjct: 112 TLKT 115
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 157 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDV 216
+ P F LG +VI+ D+ + M VG +T + YG +G P IPP++ L +V
Sbjct: 52 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEV 111
Query: 217 ELKN 220
LK
Sbjct: 112 TLKT 115
>pdb|2F2D|A Chain A, Solution Structure Of The Fk506-Binding Domain Of Human
Fkbp38
pdb|3EY6|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of Human
Fkbp38
Length = 121
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 73 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDV 132
+ P F LG +VI+ D+ + M VG +T + YG +G P IPP++ L +V
Sbjct: 50 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEV 109
Query: 133 ELKN 136
LK
Sbjct: 110 TLKT 113
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 157 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGSPPAIPPNSTLVFDV 216
+ P F LG +VI+ D+ + M VG +T + YG +G P IPP++ L +V
Sbjct: 50 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEV 109
Query: 217 ELKN 220
LK
Sbjct: 110 TLKT 113
>pdb|2UZ5|A Chain A, Solution Structure Of The Fkbp-Domain Of Legionella
Pneumophila Mip
pdb|2VCD|A Chain A, Solution Structure Of The Fkbp-domain Of Legionella
Pneumophila Mip In Complex With Rapamycin
Length = 137
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 49 KESNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIP 108
K ++V Y G+L + FDS T+ G +VI GW L M G I +P
Sbjct: 47 KSDTVTVEYTGRL-IDGTVFDS-TEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVP 104
Query: 109 AHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ +AYG + I PN TL+F + L ++
Sbjct: 105 SGLAYGPRSVGGPIGPNETLIFKIHLISV 133
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 136 NISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHM 195
++V Y G+L + FDS T+ G +VI GW L M G I +P+ +
Sbjct: 50 TVTVEYTGRL-IDGTVFDS-TEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGL 107
Query: 196 AYGNKGSPPAIPPNSTLVFDVELKNV 221
AYG + I PN TL+F + L +V
Sbjct: 108 AYGPRSVGGPIGPNETLIFKIHLISV 133
>pdb|1FD9|A Chain A, Crystal Structure Of The Macrophage Infectivity
Potentiator Protein (Mip) A Major Virulence Factor From
Legionella Pneumophila
Length = 213
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 49 KESNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIP 108
K ++V Y G+L + FDS T+ G +VI GW L M G I +P
Sbjct: 123 KSDTVTVEYTGRL-IDGTVFDS-TEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVP 180
Query: 109 AHMAYGNKGSPPAIPPNSTLVFDVELKNI 137
+ +AYG + I PN TL+F + L ++
Sbjct: 181 SGLAYGPRSVGGPIGPNETLIFKIHLISV 209
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMA 196
++V Y G+L + FDS T+ G +VI GW L M G I +P+ +A
Sbjct: 127 VTVEYTGRL-IDGTVFDS-TEKTGKPATFQVSQVIPGWTEALQLMPAGSTWEIYVPSGLA 184
Query: 197 YGNKGSPPAIPPNSTLVFDVELKNV 221
YG + I PN TL+F + L +V
Sbjct: 185 YGPRSVGGPIGPNETLIFKIHLISV 209
>pdb|2JWX|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
Fkbp38 (Fkbp38ntd)
Length = 157
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 73 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS-PPAIPPNSTLVFD 131
+ P F LG +VI+ D+ + M VG +T + YG +GS P IPP++ L +
Sbjct: 82 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLE 141
Query: 132 VELKN 136
V LK
Sbjct: 142 VTLKT 146
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 157 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS-PPAIPPNSTLVFD 215
+ P F LG +VI+ D+ + M VG +T + YG +GS P IPP++ L +
Sbjct: 82 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLE 141
Query: 216 VELKN 220
V LK
Sbjct: 142 VTLKT 146
>pdb|2D9F|A Chain A, Solution Structure Of Ruh-047, An Fkbp Domain From Human
Cdna
Length = 135
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 157 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS-PPAIPPNSTLVFD 215
+ P F LG +VI+ D+ + M VG +T + YG +GS P IPP++ L +
Sbjct: 56 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLE 115
Query: 216 VELKNV 221
V LK
Sbjct: 116 VTLKTA 121
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 73 QGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNKGS-PPAIPPNSTLVFD 131
+ P F LG +VI+ D+ + M VG +T + YG +GS P IPP++ L +
Sbjct: 56 EEPELVFTLGDCDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLE 115
Query: 132 VELKN 136
V LK
Sbjct: 116 VTLKT 120
>pdb|2F4E|A Chain A, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
pdb|2F4E|B Chain B, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
Length = 180
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 49 KESNISVYYVGKLKSNNKQFDSS--TQGPGFKFRLGKGE-VIKGWDVGLNGMKVGGKRRI 105
K S ++Y K++ +F+ + Q P + LGK + + G +G+ MK G + +
Sbjct: 66 KYSTCFLHYRAWTKNSQHKFEDTWHEQQP-IELVLGKEKKELAGLAIGVASMKSGERALV 124
Query: 106 TIPAHMAYGNKG--SPPAIPPNSTLVFDVELKNISVYYVGKLKSN 148
+ +AYG +G S P +PP + L+++VE+ GK +S+
Sbjct: 125 HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSD 169
>pdb|2IF4|A Chain A, Crystal Structure Of A Multi-Domain Immunophilin From
Arabidopsis Thaliana
Length = 338
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 49 KESNISVYYVGKLKSNNKQFDSS--TQGPGFKFRLGKGE-VIKGWDVGLNGMKVGGKRRI 105
K S ++Y K++ +F+ + Q P + LGK + + G +G+ MK G + +
Sbjct: 66 KYSTCFLHYRAWTKNSQHKFEDTWHEQQP-IELVLGKEKKELAGLAIGVASMKSGERALV 124
Query: 106 TIPAHMAYGNKG--SPPAIPPNSTLVFDVELKNISVYYVGKLKSN 148
+ +AYG +G S P +PP + L+++VE+ GK +S+
Sbjct: 125 HVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSD 169
>pdb|4DT4|A Chain A, Crystal Structure Of The Ppiase-Chaperone Slpa With The
Chaperone Binding Site Occupied By The Linker Of The
Purification Tag
Length = 169
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 43 LSLSYKKESNISVYYVGKLKSNNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGK 102
+S S + S + V++ KL + G FRLG + +G + L G+KVG K
Sbjct: 21 MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDK 80
Query: 103 RRITIPAHMAYG 114
++ A+G
Sbjct: 81 TTFSLEPDAAFG 92
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 137 ISVYYVGKLKSNNQQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMA 196
+ V++ KL + G FRLG + +G + L G+KVG K ++ A
Sbjct: 31 VLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAA 90
Query: 197 YG 198
+G
Sbjct: 91 FG 92
>pdb|3PRB|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRB|B Chain B, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRD|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
Length = 231
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 82 GKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNK 116
G+G+V+ G D + M VG +R + +P A+G +
Sbjct: 49 GEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 166 GKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNK 200
G+G+V+ G D + M VG +R + +P A+G +
Sbjct: 49 GEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
>pdb|3PR9|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRA|A Chain A, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
pdb|3PRA|B Chain B, Structural Analysis Of Protein Folding By The
Methanococcus Jannaschii Chaperone Fkbp26
Length = 157
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 82 GKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNK 116
G+G+V+ G D + M VG +R + +P A+G +
Sbjct: 49 GEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 166 GKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGNK 200
G+G+V+ G D + M VG +R + +P A+G +
Sbjct: 49 GEGQVLPGLDEAILEMDVGEEREVVLPPEKAFGKR 83
>pdb|1HXV|A Chain A, Ppiase Domain Of The Mycoplasma Genitalium Trigger Factor
Length = 113
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 64 NNKQFDSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRR--ITIPAHMAYGNKGSPPA 121
+NK+ +S ++ +G IKG++ GL MKV K+ +T P+ S P
Sbjct: 45 DNKKL-ASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKELQSKP- 102
Query: 122 IPPNSTLVFDVELKNI 137
+ F+V LK I
Sbjct: 103 ------VTFEVVLKAI 112
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 154 SSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRR--ITIPAHMAYGNKGSPPAIPPNST 211
+S ++ +G IKG++ GL MKV K+ +T P+ S P
Sbjct: 50 ASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKELQSKP------- 102
Query: 212 LVFDVELKNV 221
+ F+V LK +
Sbjct: 103 VTFEVVLKAI 112
>pdb|2K8I|A Chain A, Solution Structure Of E.Coli Slyd
Length = 171
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 69 DSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGN 115
D S + G G +I G + L G +VG K + + A+ AYG
Sbjct: 24 DESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 153 DSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGN 199
D S + G G +I G + L G +VG K + + A+ AYG
Sbjct: 24 DESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70
>pdb|2KFW|A Chain A, Solution Structure Of Full-Length Slyd From E.Coli
Length = 196
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 69 DSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGN 115
D S + G G +I G + L G +VG K + + A+ AYG
Sbjct: 24 DESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 153 DSSTQGPGFKFRLGKGEVIKGWDVGLNGMKVGGKRRITIPAHMAYGN 199
D S + G G +I G + L G +VG K + + A+ AYG
Sbjct: 24 DESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQ 70
>pdb|1LQT|A Chain A, A Covalent Modification Of Nadp+ Revealed By The Atomic
Resolution Structure Of Fpra, A Mycobacterium
Tuberculosis Oxidoreductase
pdb|1LQT|B Chain B, A Covalent Modification Of Nadp+ Revealed By The Atomic
Resolution Structure Of Fpra, A Mycobacterium
Tuberculosis Oxidoreductase
pdb|1LQU|A Chain A, Mycobacterium Tuberculosis Fpra In Complex With Nadph
pdb|1LQU|B Chain B, Mycobacterium Tuberculosis Fpra In Complex With Nadph
Length = 456
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 60 KLKSNNKQFDSSTQGPGFKF--------RLGKGEVIKGWDVGLNGMKVGGKRRITIP 108
K+KS +KQF+ + + P F+F + GE+ + +D + + R + IP
Sbjct: 59 KIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIP 115
>pdb|2C7G|A Chain A, Fpra From Mycobacterium Tuberculosis: His57gln Mutant
Length = 456
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 60 KLKSNNKQFDSSTQGPGFKF--------RLGKGEVIKGWDVGLNGMKVGGKRRITIP 108
K+KS +KQF+ + + P F+F + GE+ + +D + + R + IP
Sbjct: 59 KIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPGELSERYDAVIYAVGAQSDRMLNIP 115
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,318,816
Number of Sequences: 62578
Number of extensions: 315433
Number of successful extensions: 697
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 529
Number of HSP's gapped (non-prelim): 147
length of query: 222
length of database: 14,973,337
effective HSP length: 95
effective length of query: 127
effective length of database: 9,028,427
effective search space: 1146610229
effective search space used: 1146610229
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)