BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy403
         (233 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328776427|ref|XP_625135.3| PREDICTED: cathepsin L-like [Apis mellifera]
          Length = 351

 Score =  216 bits (551), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 119/166 (71%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE+SYPYEA                                +D C
Sbjct: 197 MDQAFQYIKDNKGLDTEASYPYEAE-------------------------------NDKC 225

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SGA+D GY+DIP GDE  LKAAVATIGPVS+AIDASHQSFQFYSEGVYYEPEC+
Sbjct: 226 RYNPANSGAIDVGYIDIPTGDEKLLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECS 285

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           S +LDH VLV+GYGT+ENG DYWLVKNSW  TWG+ GYIKMARN++
Sbjct: 286 SEELDHGVLVIGYGTNENGQDYWLVKNSWGETWGNNGYIKMARNKL 331


>gi|340727787|ref|XP_003402217.1| PREDICTED: cathepsin L-like [Bombus terrestris]
          Length = 343

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/166 (65%), Positives = 117/166 (70%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE +YPYEA                                +D C
Sbjct: 191 MDQAFQYIKDNKGLDTEVTYPYEAE-------------------------------NDKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SGA D GYVDIP+G+E KLKAAVATIGPVS+AIDASHQSFQFYSEGVYYEPEC+
Sbjct: 220 RYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           S  LDH VL VGYGTDENG DYWLVKNSW  TWGD GYIKMARN++
Sbjct: 280 SENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYIKMARNKL 325


>gi|350412176|ref|XP_003489564.1| PREDICTED: cathepsin L-like [Bombus impatiens]
          Length = 343

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/166 (65%), Positives = 117/166 (70%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE +YPYEA                                +D C
Sbjct: 191 MDQAFQYIKDNKGLDTEVTYPYEAE-------------------------------NDKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SGA D GYVDIP+G+E KLKAAVATIGPVS+AIDASHQSFQFYSEGVYYEPEC+
Sbjct: 220 RYNAANSGARDVGYVDIPQGNEKKLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           S  LDH VL VGYGTDENG DYWLVKNSW  TWGD GYIKMARN++
Sbjct: 280 SENLDHGVLAVGYGTDENGQDYWLVKNSWGETWGDNGYIKMARNKL 325


>gi|380014284|ref|XP_003691169.1| PREDICTED: cathepsin L-like [Apis florea]
          Length = 345

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 119/166 (71%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE+SYPYEA                                +D C
Sbjct: 191 MDQAFQYIKDNKGLDTEASYPYEAE-------------------------------NDKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SGA+D GY+DIP G+E  LKAAVATIGPVS+AIDASHQSFQFYSEGVYYEPEC+
Sbjct: 220 RYNPANSGAIDVGYIDIPTGNEKLLKAAVATIGPVSVAIDASHQSFQFYSEGVYYEPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           S +LDH VLV+GYGT+ENG DYWLVKNSW  TWG+ GYIKMARN++
Sbjct: 280 SEELDHGVLVIGYGTNENGEDYWLVKNSWGETWGNNGYIKMARNKL 325


>gi|307192137|gb|EFN75465.1| Cathepsin L [Harpegnathos saltator]
          Length = 339

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 116/233 (49%), Positives = 129/233 (55%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDNHG+DTE SYPYEA                                +D C
Sbjct: 191 MDQAFQYIKDNHGLDTEISYPYEAE-------------------------------NDKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA D GYVDIPEG+E KLKAAVATIGPVS+AIDAS +SFQFY EGVYYEP C+
Sbjct: 220 RYNPRNNGATDSGYVDIPEGNEKKLKAAVATIGPVSVAIDASAESFQFYREGVYYEPRCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           S  LDH VLVVGYGTD+N  DYWLVKNSW  TWGDEGYIKMARN+               
Sbjct: 280 SENLDHGVLVVGYGTDDNDQDYWLVKNSWGVTWGDEGYIKMARNK--------------- 324

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +N+CG+ASSAS+PLV
Sbjct: 325 --------------------------------------DNHCGIASSASYPLV 339


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN GIDTE +YPYEA+                               DD C
Sbjct: 196 MDNAFQYVKDNKGIDTEKAYPYEAI-------------------------------DDEC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA D+G+VDIP+GDE  LK A+AT+GPVS+AIDASH+SFQFYSEGVYYEP+C+
Sbjct: 225 HYNPKAIGATDKGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCD 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VL VGYGT E+G DYWLVKNSW TTWGD+GY+KMARNR
Sbjct: 285 SEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNR 329


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  207 bits (526), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 105/165 (63%), Positives = 116/165 (70%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GIDTE++YPYEA                                DD C
Sbjct: 187 MDQAFQYIKDNKGIDTENTYPYEAE-------------------------------DDVC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GAVDRG+VDIP G+E KLKAAVAT+GPVS+AIDASH+SFQFYS+GVYYEP C+
Sbjct: 216 RYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCD 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+D NG DYWLVKNSW+  WGDEGYIKMARNR
Sbjct: 276 SDDLDHGVLVVGYGSD-NGKDYWLVKNSWSEHWGDEGYIKMARNR 319


>gi|383849553|ref|XP_003700409.1| PREDICTED: cathepsin L-like [Megachile rotundata]
          Length = 343

 Score =  206 bits (523), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 114/164 (69%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YIKDN G+DTE +YPYE                                 DD C
Sbjct: 191 MDQAFSYIKDNKGLDTEKTYPYEGE-------------------------------DDKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +  SGA D G+VDIP GDE KLKAAVAT+GPVS+AIDASHQSFQFYS+G+Y+EPEC+
Sbjct: 220 RYDKRSSGASDVGFVDIPVGDEQKLKAAVATVGPVSVAIDASHQSFQFYSDGIYFEPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST LDH VLVVGYGTDE G DYW+VKNSW  +WG++GYIKMARN
Sbjct: 280 STNLDHGVLVVGYGTDEEGRDYWIVKNSWGESWGEKGYIKMARN 323


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  206 bits (523), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 112/165 (67%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTE SYPYEA+                               DD C
Sbjct: 191 MDYAFQYIKDNGGIDTEKSYPYEAI-------------------------------DDTC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +     GA D+GYVDIP+GDE  LK A+AT+GPVSIAIDASH+SFQFYSEGVYYEP+C+
Sbjct: 220 HFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT E G DYWLVKNSW TTWGD+GY+KMARNR
Sbjct: 280 SENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNR 324


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 116/165 (70%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GIDTE++YPYEA                                DD C
Sbjct: 191 MDQAFQYIKDNKGIDTENTYPYEAE-------------------------------DDVC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GAVDRG+VDIP G+E KLKAAVAT+GPVS+AIDASH+SFQFYS+GVYYEP C+
Sbjct: 220 RYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+D NG DYWLVKNSW+  WGDEGYIK+ARNR
Sbjct: 280 SDDLDHGVLVVGYGSD-NGKDYWLVKNSWSEHWGDEGYIKIARNR 323


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPY+A                                D+ C
Sbjct: 189 MDNAFRYIKDNGGIDTEQSYPYKAE-------------------------------DEKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK    GA DRG+VDI  GDE KLKAAVAT+GP+S+AIDASH +FQ YSEGVYYEPEC+
Sbjct: 218 HYKPRNKGATDRGFVDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGVYYEPECS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYGTDE+GNDYWLVKNSW  +WGD+GYIKMARNR
Sbjct: 278 SEQLDHGVLVVGYGTDEDGNDYWLVKNSWGDSWGDQGYIKMARNR 322


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTE SYPYEA+                               DD C
Sbjct: 196 MDFAFQYIKDNKGIDTEKSYPYEAI-------------------------------DDEC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA D+G+VDIP+G+E  L  A+AT+GPVS+AIDASH+SFQFYSEGVYYEP+C+
Sbjct: 225 HYNPKAVGATDKGFVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCD 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VL VGYGT E+G DYWLVKNSW TTWGD+GY+KMARNR
Sbjct: 285 SEQLDHGVLAVGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNR 329


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K NHGIDTE+SYPY A                                D+ C
Sbjct: 191 MDNAFKYVKYNHGIDTEASYPYHA-------------------------------DDEKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    SGA DRG+VDIP GDE KL AAVAT+GPVS+AIDASH+SFQ YSEGVYY+PEC+
Sbjct: 220 HYNPKTSGATDRGFVDIPTGDEEKLMAAVATVGPVSVAIDASHESFQLYSEGVYYDPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGTDENG DYW+VKNSW  +WG++GYIKMARNR
Sbjct: 280 SEELDHGVLVVGYGTDENGQDYWIVKNSWGESWGEQGYIKMARNR 324


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/165 (62%), Positives = 116/165 (70%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GIDTE++YPYEA                                DD C
Sbjct: 187 MDQAFQYIKDNKGIDTENTYPYEAE-------------------------------DDVC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GAVDRG+VDIP G+E KLKAAVAT+GPVS+AIDASH+SFQFYS+GVYYEP C+
Sbjct: 216 RYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCD 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+D NG DYWLVKNSW+  WGD+GYIK+ARNR
Sbjct: 276 SDDLDHGVLVVGYGSD-NGKDYWLVKNSWSEHWGDQGYIKIARNR 319


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 113/164 (68%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD+C
Sbjct: 191 MDNAFRYIKDNGGIDTEKSYPYEGI-------------------------------DDSC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+G+E K+  AVATIGPVS+AIDASH+SFQFYSEG+Y EPECN
Sbjct: 220 HFNKDSVGATDRGFADIPQGNEKKMAEAVATIGPVSVAIDASHESFQFYSEGIYNEPECN 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYGTDE+G DYWLVKNSW TTWGD+G+IKMARN
Sbjct: 280 SQNLDHGVLVVGYGTDESGKDYWLVKNSWGTTWGDKGFIKMARN 323


>gi|194757786|ref|XP_001961143.1| GF13722 [Drosophila ananassae]
 gi|190622441|gb|EDV37965.1| GF13722 [Drosophila ananassae]
          Length = 417

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 269 MDNAFRYIKDNGGIDTEKSYPYEAL-------------------------------DDSC 297

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+VDIP+G+E KL  AVATIGPVS+AIDASH+SFQFYSEGVY EP C+
Sbjct: 298 HFNKGTIGATDRGFVDIPQGNEKKLAEAVATIGPVSVAIDASHESFQFYSEGVYVEPACD 357

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 358 AQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNK 402


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  202 bits (515), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 100/164 (60%), Positives = 111/164 (67%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTE SYPYEA+                               DD C
Sbjct: 191 MDYAFQYIKDNGGIDTEKSYPYEAI-------------------------------DDTC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +     GA D+GYVDIP+GDE  LK A+AT+GPVSIAIDASH+SFQFYSEGVYYEP+C+
Sbjct: 220 HFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VL VGYGT E G DYWLVKNSW TTWGD+GY+KMARN
Sbjct: 280 SENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARN 323


>gi|1093503|prf||2104214A Cys protease
          Length = 255

 Score =  202 bits (514), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 115/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 107 MDNAFPYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 135

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + RA+ GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 136 HFNRAQVGATDRGFTDIPQGDEKKMPEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 195

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 196 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 240


>gi|195381187|ref|XP_002049336.1| GJ20806 [Drosophila virilis]
 gi|194144133|gb|EDW60529.1| GJ20806 [Drosophila virilis]
          Length = 339

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 113/164 (68%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD+C
Sbjct: 191 MDNAFRYIKDNGGIDTEKSYPYEGI-------------------------------DDSC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +A  GA DRG VDIP+GDE K+  AVATIGPVS+AIDASH+SFQFYSEG+Y EP+C+
Sbjct: 220 HFNKATIGATDRGSVDIPQGDEKKMAEAVATIGPVSVAIDASHESFQFYSEGIYNEPQCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              LDH VLVVGYGTDE+G DYWLVKNSW TTWGD+G+IKMARN
Sbjct: 280 PQNLDHGVLVVGYGTDESGQDYWLVKNSWGTTWGDKGFIKMARN 323


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD+C
Sbjct: 191 MDNAFRYIKDNGGIDTEKSYPYEGI-------------------------------DDSC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +A  GA D G+VDIPEGDE K+K AVAT+GPVS+AIDASH+SFQ YSEGVY EPEC+
Sbjct: 220 HFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGYGTDE+G DYWLVKNSW TTWG++GYIKMARN+
Sbjct: 280 EQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQ 324


>gi|24653514|ref|NP_523735.2| cysteine proteinase-1, isoform C [Drosophila melanogaster]
 gi|118572624|sp|Q95029.2|CATL_DROME RecName: Full=Cathepsin L; AltName: Full=Cysteine proteinase 1;
           Contains: RecName: Full=Cathepsin L heavy chain;
           Contains: RecName: Full=Cathepsin L light chain; Flags:
           Precursor
 gi|21627209|gb|AAM68565.1| cysteine proteinase-1, isoform C [Drosophila melanogaster]
          Length = 371

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 223 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 251

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 252 HFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 311

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 312 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 356


>gi|255522980|gb|ACU12382.1| RE21773p [Drosophila melanogaster]
          Length = 375

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 227 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 255

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 256 HFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 315

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 316 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 360


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/164 (59%), Positives = 111/164 (67%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD+C
Sbjct: 192 MDNAFRYIKDNGGIDTEKSYPYEGI-------------------------------DDSC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE KL  AVATIGPVS+AIDASH+SFQFYS GVY EP+C+
Sbjct: 221 HFNKGTIGATDRGFTDIPQGDEKKLAQAVATIGPVSVAIDASHESFQFYSTGVYDEPQCD 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              LDH VLVVGYGTDENG DYWLVKNSW TTWGD+G+IKMARN
Sbjct: 281 PQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFIKMARN 324


>gi|195583187|ref|XP_002081405.1| GD10995 [Drosophila simulans]
 gi|194193414|gb|EDX06990.1| GD10995 [Drosophila simulans]
          Length = 341

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 118/172 (68%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 222 HFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVG+GTDE+G+DYWLVKNSW TTWGD+G+IKM RN+   E +C
Sbjct: 282 AQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRNK---ENQC 330


>gi|24653516|ref|NP_725347.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|24653518|ref|NP_725348.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|1658527|gb|AAB18345.1| cysteine proteinase 1 [Drosophila melanogaster]
 gi|2305221|gb|AAB65749.1| cysteine proteinase-1 [Drosophila melanogaster]
 gi|7303249|gb|AAF58311.1| cysteine proteinase-1, isoform A [Drosophila melanogaster]
 gi|21627210|gb|AAM68566.1| cysteine proteinase-1, isoform B [Drosophila melanogaster]
 gi|54650754|gb|AAV36956.1| LP06554p [Drosophila melanogaster]
 gi|220951982|gb|ACL88534.1| Cp1-PA [synthetic construct]
          Length = 341

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 117/172 (68%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 222 HFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+   E +C
Sbjct: 282 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK---ENQC 330


>gi|195484843|ref|XP_002090843.1| GE12574 [Drosophila yakuba]
 gi|194176944|gb|EDW90555.1| GE12574 [Drosophila yakuba]
          Length = 341

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 115/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 222 HFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G+DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 282 AQNLDHGVLVVGFGTDESGDDYWLVKNSWGTTWGDKGFIKMLRNK 326


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 115/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPV++AIDASH+SFQFYSEGVY EP+C+
Sbjct: 222 HFNKGAIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVGYGTDE+G+DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 282 AQNLDHGVLVVGYGTDESGDDYWLVKNSWGTTWGDKGFIKMLRNK 326


>gi|320543907|ref|NP_001188921.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
 gi|318068589|gb|ADV37168.1| cysteine proteinase-1, isoform D [Drosophila melanogaster]
          Length = 249

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 114/165 (69%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 101 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 129

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 130 HFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCD 189

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 190 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 234


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 110/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTE +YPYEA+                               DD C
Sbjct: 192 MDFAFQYIKDNGGIDTEKAYPYEAI-------------------------------DDTC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA D+G+VDIP+GDE  L  A+AT GPVS+AIDASH+SFQFYSEGVYYEP+C+
Sbjct: 221 HYNPKAVGATDKGFVDIPQGDEKALMKAIATAGPVSVAIDASHESFQFYSEGVYYEPQCD 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT E G DYWLVKNSW TTWGD+GY+KMARNR
Sbjct: 281 SENLDHGVLAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNR 325


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/165 (61%), Positives = 114/165 (69%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GIDTE++YPYEA                                D  C
Sbjct: 191 MDQAFQYIKDNKGIDTENTYPYEAE-------------------------------DGVC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GAVDRG+VDIP G+E KLKAAVAT+GPVS+AIDASH+SFQFYS+G YYEP C+
Sbjct: 220 RYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGXYYEPSCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+D NG DYWLVKNSW+  WGDEGYIK+ARNR
Sbjct: 280 SDDLDHGVLVVGYGSD-NGEDYWLVKNSWSEHWGDEGYIKIARNR 323



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVAS 226
           YYEP C+S  LDH VLVVGYG+D NG DYWLVKNSW+  WGDEGYIK+ARNR+N+CGVA+
Sbjct: 273 YYEPSCDSDDLDHGVLVVGYGSD-NGEDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVAT 331

Query: 227 SASFPLV 233
           +AS+PLV
Sbjct: 332 AASYPLV 338


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/165 (61%), Positives = 115/165 (69%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GIDTE++YPYEA                                D+ C
Sbjct: 191 MDQAFQYIKDNKGIDTENTYPYEAE-------------------------------DNVC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GA+DRG+V IP G+E KLKAAVAT+GPVS+AIDASH+SFQFYS+GVYYEP C+
Sbjct: 220 RYNPRNRGAIDRGFVHIPSGEEDKLKAAVATVGPVSVAIDASHESFQFYSKGVYYEPSCD 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+D NG DYWLVKNSW+  WGDEGYIK+ARNR
Sbjct: 280 SDDLDHGVLVVGYGSD-NGKDYWLVKNSWSEHWGDEGYIKIARNR 323


>gi|322799749|gb|EFZ20954.1| hypothetical protein SINV_06041 [Solenopsis invicta]
          Length = 337

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 116/166 (69%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+DTE +YPYEA                                +D C
Sbjct: 188 MDYAFQYIKDNKGLDTEKTYPYEAE-------------------------------NDRC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+GYVDIP+GDE KLKAAVATIGP+S+AIDASH+SFQ YSEGVYY+P+C+
Sbjct: 217 RYNPRNSGATDKGYVDIPQGDEEKLKAAVATIGPISVAIDASHESFQLYSEGVYYDPDCS 276

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VL+VGYGTDE +G+DYWLVKNSW  TWG +GYIKMARN+
Sbjct: 277 AENLDHGVLIVGYGTDETSGHDYWLVKNSWGKTWGQKGYIKMARNK 322


>gi|195334204|ref|XP_002033774.1| GM21500 [Drosophila sechellia]
 gi|194125744|gb|EDW47787.1| GM21500 [Drosophila sechellia]
          Length = 341

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 96/172 (55%), Positives = 117/172 (68%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+GDE K+  AVAT+GPV++AIDASH+SFQFYSEGVY EP+C+
Sbjct: 222 HFNKGTIGATDRGFTDIPQGDEKKMAEAVATVGPVAVAIDASHESFQFYSEGVYNEPQCD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+   E +C
Sbjct: 282 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK---ENQC 330


>gi|125811033|ref|XP_001361727.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
 gi|54636904|gb|EAL26307.1| GA25021 [Drosophila pseudoobscura pseudoobscura]
          Length = 341

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 117/172 (68%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+VDIP+G+E K+  AVATIGPV++AIDASH+SFQFYSEGVY EP C+
Sbjct: 222 HFNKGTIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+   E +C
Sbjct: 282 AQNLDHGVLVVGFGTDESGQDYWLVKNSWGTTWGDKGFIKMLRNK---ENQC 330


>gi|195153545|ref|XP_002017686.1| GL17172 [Drosophila persimilis]
 gi|194113482|gb|EDW35525.1| GL17172 [Drosophila persimilis]
          Length = 341

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 117/172 (68%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 193 MDNAFRYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+VDIP+G+E K+  AVATIGPV++AIDASH+SFQFYSEGVY EP C+
Sbjct: 222 HFNKGSIGATDRGFVDIPQGNEKKMAEAVATIGPVAVAIDASHESFQFYSEGVYNEPACD 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+   E +C
Sbjct: 282 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK---ENQC 330


>gi|1498185|dbj|BAA06738.1| cysteine proteinase-1 precursor [Drosophila melanogaster]
          Length = 254

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 106 MDNAFPYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 134

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + RA+ GA DRG+ DIP+GDE K+   V T+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 135 HFNRAQVGATDRGFTDIPQGDEKKMPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCD 194

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 195 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 239


>gi|2146900|pir||S67481 cathepsin L-like cysteine proteinase (EC 3.4.22.-) CP1 [similarity]
           - fruit fly (Drosophila melanogaster)  (fragment)
          Length = 218

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIKDN GIDTE SYPYEA+                               DD+C
Sbjct: 70  MDNAFPYIKDNGGIDTEKSYPYEAI-------------------------------DDSC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + RA+ GA DRG+ DIP+GDE K+   V T+GPVS+AIDASH+SFQFYSEGVY EP+C+
Sbjct: 99  HFNRAQVGATDRGFTDIPQGDEKKMPEPVPTVGPVSVAIDASHESFQFYSEGVYNEPQCD 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVG+GTDE+G DYWLVKNSW TTWGD+G+IKM RN+
Sbjct: 159 AQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNK 203


>gi|389610697|dbj|BAM18960.1| cathepsin L [Papilio polytes]
          Length = 341

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 112/165 (67%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD C
Sbjct: 193 MDNAFKYIKDNKGIDTEKSYPYEAV-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G++DIP GDE KL AAVAT+GPVS+AIDAS ++FQFYS+GVY++  C+
Sbjct: 222 RYNPRNSGADDVGFIDIPSGDEGKLMAAVATVGPVSVAIDASQETFQFYSDGVYFDENCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYGTDENG DYWLVKNSW  +WGD GYIKMARNR
Sbjct: 282 STSLDHGVLVVGYGTDENGGDYWLVKNSWGRSWGDLGYIKMARNR 326


>gi|307175095|gb|EFN65237.1| Cathepsin L [Camponotus floridanus]
          Length = 372

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/234 (47%), Positives = 127/234 (54%), Gaps = 85/234 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+N G+DTE SYPYEA                                +D C
Sbjct: 223 MDYAFRYIKENKGLDTEKSYPYEAE-------------------------------NDQC 251

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIPEGDE KLKAAVATIGP+S+AIDASH+SF FYSEGVYYEPEC+
Sbjct: 252 RYNPKNSGASDVGFVDIPEGDEDKLKAAVATIGPISVAIDASHESFHFYSEGVYYEPECS 311

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDH 179
              LDH VL+VGYGTD   G DYWLVKNSW  TWG++GYIKMARN+              
Sbjct: 312 PANLDHGVLIVGYGTDSGTGEDYWLVKNSWGETWGEKGYIKMARNK-------------- 357

Query: 180 AVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                  EN+CG+ASSAS+PLV
Sbjct: 358 ---------------------------------------ENHCGIASSASYPLV 372


>gi|389608655|dbj|BAM17937.1| cathepsin L [Papilio xuthus]
          Length = 341

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 110/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD C
Sbjct: 193 MDNAFKYIKDNRGIDTEKSYPYEGI-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA D G+VDIP GDE KL AAVAT+GPVS+AIDAS  SFQFYS+GVY++  C+
Sbjct: 222 RYNPKNTGADDNGFVDIPSGDEGKLMAAVATVGPVSVAIDASQSSFQFYSDGVYFDENCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDH VLVVGYGTDENG DYWLVKNSW  +WGD GYIKMARNR
Sbjct: 282 SSSLDHGVLVVGYGTDENGGDYWLVKNSWGRSWGDLGYIKMARNR 326


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/165 (58%), Positives = 112/165 (67%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYE +                               DD+C
Sbjct: 189 MDNAFRYIKDNGGIDTEKSYPYEGI-------------------------------DDSC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + ++  GA D G+VDIP+GDE  L  AVAT+GPVS+AIDASH+SFQ YSEGVY EPEC+
Sbjct: 218 HFTKSGVGATDTGFVDIPQGDEEALMKAVATMGPVSVAIDASHESFQLYSEGVYNEPECD 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VLVVGYGTD+ G DYWLVKNSW TTWGD+GYIKMARN+
Sbjct: 278 AQNLDHGVLVVGYGTDKTGLDYWLVKNSWGTTWGDQGYIKMARNQ 322


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/233 (46%), Positives = 126/233 (54%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYEA+                               DD C
Sbjct: 193 MDNAFKYIKDNDGIDTEKTYPYEAV-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIP GDE+KL  A+AT+GPVS+AIDAS +SFQ YS+GVYY+  C+
Sbjct: 222 RYNPKNSGAEDVGFVDIPAGDEHKLMLALATVGPVSVAIDASQESFQLYSDGVYYDENCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           S  LDH VLVVGYGTDE+G DYWLVKNSW  +WGDEGYIKMARNR               
Sbjct: 282 SENLDHGVLVVGYGTDEDGGDYWLVKNSWGPSWGDEGYIKMARNR--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +N+CG+ASSAS+PLV
Sbjct: 327 --------------------------------------DNHCGIASSASYPLV 341


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 96/165 (58%), Positives = 112/165 (67%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE +YPY+A                                D+ C
Sbjct: 189 MDNAFRYIKANGGIDTEQAYPYKAE-------------------------------DEKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK    GA DRGYVDI  G+E KL++AVAT+GPVS+AIDASHQSFQ YS GVYYEPEC+
Sbjct: 218 HYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPECS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +QLDH VLVVGYGT+++G DYWLVKNSW  +WGD+GYIKMARNR
Sbjct: 278 PSQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNR 322


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE +YPY+A                                D+ C
Sbjct: 189 MDNAFRYIKANGGIDTEQAYPYKAE-------------------------------DEKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK    GA DRGYVDI  G+E KL++AVAT+GPVS+AIDASHQSFQ YS GVYYEP+C+
Sbjct: 218 HYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++QLDH VLVVGYGT+++G DYWLVKNSW  +WGD+GYIKMARNR
Sbjct: 278 ASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNR 322


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE +YPY+A                                D+ C
Sbjct: 189 MDNAFRYIKANGGIDTEQAYPYKAE-------------------------------DEKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK    GA DRGYVDI  G+E KL++AVAT+GPVS+AIDASHQSFQ YS GVYYEP+C+
Sbjct: 218 HYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPDCS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++QLDH VLVVGYGT+++G DYWLVKNSW  +WGD+GYIKMARNR
Sbjct: 278 ASQLDHGVLVVGYGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNR 322


>gi|34559455|gb|AAQ75437.1| cathepsin L-like protease [Helicoverpa armigera]
 gi|338855117|gb|AEJ31938.1| cathepsin L-like protease [Helicoverpa assulta]
          Length = 341

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYE +                               DD C
Sbjct: 193 MDNAFKYIKDNGGIDTEKAYPYEGV-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIP+GDE KL  AVAT+GPVS+AIDAS +SFQFYS+GVYY+  C+
Sbjct: 222 RYNAKNSGADDVGFVDIPQGDEEKLMQAVATVGPVSVAIDASQESFQFYSDGVYYDENCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH V+VVGYGTDE G DYWLVKNSW  TWGD GYIKMARN+
Sbjct: 282 STDLDHGVMVVGYGTDEQGGDYWLVKNSWGRTWGDLGYIKMARNK 326


>gi|254746340|emb|CAX16635.1| putative C1A cysteine protease precursor [Manduca sexta]
          Length = 342

 Score =  192 bits (488), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/165 (60%), Positives = 109/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYE +                               DD C
Sbjct: 194 MDNAFKYIKDNGGIDTEKTYPYEGV-------------------------------DDKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIP GDE KL  AVAT+GPVS+AIDAS  SFQFYS GVYY+ EC+
Sbjct: 223 RYNPKNSGAEDVGFVDIPSGDEEKLMQAVATVGPVSVAIDASQNSFQFYSGGVYYDTECS 282

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYGTDE G DYWLVKNSW+ TWG+ GYIKMARNR
Sbjct: 283 STDLDHGVLVVGYGTDEAGGDYWLVKNSWSRTWGELGYIKMARNR 327


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 124/233 (53%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N GIDTE SYPY+A                                D+ C
Sbjct: 193 MDNAFEYVKENGGIDTEESYPYDAE-------------------------------DEKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +GA D+G+VD+ EG E+ LK AVAT+GPVS+AIDASH+SFQFYS GVY EPEC+
Sbjct: 222 HYNPRAAGAEDKGFVDVREGSEHALKKAVATVGPVSVAIDASHESFQFYSHGVYIEPECS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
              LDH VLVVGYG D++G DYWLVKNSW TTWGD+GY+KMARNR               
Sbjct: 282 PEMLDHGVLVVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNR--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +N CG+ASSASFPLV
Sbjct: 327 --------------------------------------DNQCGIASSASFPLV 341


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 112/165 (67%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN G+DTE SYPYE +                               DD+C
Sbjct: 190 MDNAFRYIKDNGGVDTEKSYPYEGI-------------------------------DDSC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +A  GA D G+VDIP+GDE  +  AVAT+GPV++AIDAS++SFQ YSEGVY +P C+
Sbjct: 219 HFNKATVGATDTGFVDIPQGDEEAMMKAVATMGPVAVAIDASNESFQLYSEGVYNDPNCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGTD++G DYWLVKNSW TTWGD+GYIKMARN+
Sbjct: 279 SDNLDHGVLVVGYGTDKDGQDYWLVKNSWGTTWGDQGYIKMARNQ 323


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 109/165 (66%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+NHGIDTE SYPYE                                 D+ C
Sbjct: 187 MDNAFQYIKENHGIDTEKSYPYEGE-------------------------------DETC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+++   GA D G+VDI +GDE  L  AVATIGP+S+AIDASHQSFQFYSEGVYYEPEC+
Sbjct: 216 RFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAIDASHQSFQFYSEGVYYEPECS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG ++N   YWLVKNSW T WGD GYIKMAR++
Sbjct: 276 SENLDHGVLVVGYGVEDN-QKYWLVKNSWGTQWGDGGYIKMARDQ 319


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/172 (54%), Positives = 115/172 (66%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+KDN GIDTE SY YE +                               DD+C
Sbjct: 193 MDNAFRYVKDNGGIDTEKSYAYEGI-------------------------------DDSC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA DRG+ DIP+G+E KL  AVATIGPVS+AIDAS QSFQFYSEGVY EP C+
Sbjct: 222 HFDKNSIGATDRGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +  LDH VLVVGYGT+++G+DYWLVKNSW TTWGD+G+IKM+RN+   E +C
Sbjct: 282 AENLDHGVLVVGYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRNK---ENQC 330


>gi|262410743|gb|ACY66807.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/233 (45%), Positives = 121/233 (51%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 193 MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 222 RYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VGYGTD  G DYW+VKNSW  TWGD+GYI MARN+               
Sbjct: 282 STELDHGVLAVGYGTDHKGGDYWIVKNSWGKTWGDQGYIMMARNK--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 327 --------------------------------------KNNCGVASSASYPLV 341


>gi|21425246|emb|CAD33266.1| cathepsin L [Aphis gossypii]
          Length = 341

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 122/233 (52%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 193 MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 222 RYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VG+G+D+ G DYW+VKNSW  TWGDEGYI MARN+               
Sbjct: 282 STELDHGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMARNK--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 327 --------------------------------------KNNCGVASSASYPLV 341


>gi|209693435|ref|NP_001129410.1| cathepsin L precursor [Acyrthosiphon pisum]
 gi|251823771|ref|NP_001156569.1| cathepsin L precursor [Acyrthosiphon pisum]
          Length = 341

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 122/233 (52%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 193 MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 222 RYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VG+G+D+ G DYW+VKNSW  TWGDEGYI MARN+               
Sbjct: 282 STELDHGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMARNK--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 327 --------------------------------------KNNCGVASSASYPLV 341


>gi|52630917|gb|AAU84922.1| putative cathepsin L [Toxoptera citricida]
          Length = 341

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 105/233 (45%), Positives = 121/233 (51%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 193 MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 222 RYNPENSGATDKGFVDIPEGDEDALVHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VGYGTD  G DYW+VKNSW  TWGD+GYI MARN+               
Sbjct: 282 STELDHGVLAVGYGTDHKGGDYWIVKNSWGKTWGDQGYIMMARNK--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 327 --------------------------------------KNNCGVASSASYPLV 341


>gi|164420679|ref|NP_001037464.2| fibroinase precursor [Bombyx mori]
 gi|40556818|gb|AAR87763.1| fibroinase precursor [Bombyx mori]
          Length = 341

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/165 (58%), Positives = 107/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYE +                               DD C
Sbjct: 193 MDNAFKYIKDNGGIDTEQTYPYEGV-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA D G+VDIPEGDE KL  AVAT+GPVS+AIDASH SFQ YS GVY E EC+
Sbjct: 222 RYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTSFQLYSSGVYNEEECS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYGTDE G DYWLVKNSW  +WG+ GYIKM RN+
Sbjct: 282 STDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNK 326


>gi|239792390|dbj|BAH72546.1| ACYPI006974 [Acyrthosiphon pisum]
          Length = 156

 Score =  189 bits (480), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 122/233 (52%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 8   MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 36

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 37  RYNPENSGATDKGFVDIPEGDEDALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 96

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VG+G+D+ G DYW+VKNSW  TWGDEGYI MARN+               
Sbjct: 97  STELDHGVLAVGFGSDKKGGDYWIVKNSWGKTWGDEGYIMMARNK--------------- 141

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 142 --------------------------------------KNNCGVASSASYPLV 156


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/165 (59%), Positives = 109/165 (66%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPY A                                D  C
Sbjct: 188 MDNAFKYIKSNKGIDTEWSYPYNAT-------------------------------DGVC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + R+  GA D G+VDIPEGDE KLK AVA +GPVS+AIDASH+SFQFYSEGVY EPEC+
Sbjct: 217 HFNRSDVGATDTGFVDIPEGDENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYDEPECS 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYGT ++G DYWLVKNSW TTWGDEGYI M RN+
Sbjct: 277 SEQLDHGVLVVGYGT-KDGQDYWLVKNSWGTTWGDEGYIYMTRNK 320


>gi|449675685|ref|XP_002161512.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 148

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/164 (57%), Positives = 112/164 (68%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+N GID+E+SYPY                               T+ D  C
Sbjct: 1   MDNAFAYIKENKGIDSEASYPY-------------------------------TAEDGKC 29

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++   A D G+VDIPEG+E KLK AVA+IGP+S+AIDASH+SFQFYS GVY EP C+
Sbjct: 30  VFKKSSVAATDTGFVDIPEGNENKLKEAVASIGPISVAIDASHESFQFYSSGVYNEPSCS 89

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VLVVGYGT E+G DYWLVKNSWNT+WGD+GYIKM RN
Sbjct: 90  STELDHGVLVVGYGT-ESGKDYWLVKNSWNTSWGDKGYIKMRRN 132


>gi|339252572|ref|XP_003371509.1| cathepsin L1 [Trichinella spiralis]
 gi|316968239|gb|EFV52542.1| cathepsin L1 [Trichinella spiralis]
          Length = 448

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/233 (44%), Positives = 135/233 (57%), Gaps = 62/233 (26%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+NHGIDTE SYPYEA +  L                           D  C
Sbjct: 278 MDNAFEYVKENHGIDTEESYPYEAAVRML---------------------------DKKC 310

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K +  GA D+G+VDI  G+E  L  AVATIGP+S+AIDASH+SFQFYS G+       
Sbjct: 311 RFKNSTIGATDKGFVDIEPGNETYLMHAVATIGPLSVAIDASHESFQFYSSGM------- 363

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
                  +L+V             + N+    W + G        VY+EP C+S  LDH 
Sbjct: 364 -------LLMVD------------IFNTVEVMWTNLG--------VYFEPMCSSQFLDHG 396

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           VLVVGYG+ + G DYW+VKNSW T+WG++GYI MARN+ N+CG+AS AS+P++
Sbjct: 397 VLVVGYGSLK-GKDYWIVKNSWGTSWGNDGYIFMARNKNNSCGIASFASYPII 448


>gi|118424553|gb|ABK90824.1| cathepsin L-like cysteine proteinase [Spodoptera exigua]
          Length = 344

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 113/165 (68%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD C
Sbjct: 196 MDNAFKYIKDNGGIDTEKSYPYEAV-------------------------------DDKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY   +SGA D G+VDIP+GDE KL  AVAT+GP+S+AIDAS ++FQFYS+GVYY+  C+
Sbjct: 225 RYNPKESGADDVGFVDIPQGDEEKLMQAVATVGPISVAIDASQETFQFYSKGVYYDENCS 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH V+VVGYGT+E+G+D WLVKNSW  +WG+ GYIKMARN+
Sbjct: 285 STDLDHGVMVVGYGTEEDGSDDWLVKNSWGRSWGELGYIKMARNK 329


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 110/165 (66%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPY A                                D  C
Sbjct: 184 MDYAFKYIKANKGIDTEQSYPYNAT-------------------------------DGVC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + ++  GA D G+VDIPEGDE KLK AVAT+GPVS+AIDASH+SFQFYSEGVY EPEC+
Sbjct: 213 HFNKSAVGATDTGFVDIPEGDENKLKKAVATVGPVSVAIDASHESFQFYSEGVYDEPECD 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYGT ++G DYWLVKNSW TTWGD GYI M+RN+
Sbjct: 273 SEQLDHGVLVVGYGT-KDGQDYWLVKNSWGTTWGDGGYIYMSRNK 316


>gi|306992173|gb|ADN19567.1| cathepsin L-like proteinase [Spodoptera frugiperda]
          Length = 344

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 110/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPYEA+                               DD C
Sbjct: 196 MDNAFKYIKDNGGIDTEKSYPYEAV-------------------------------DDKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIP+GDE KL  AVAT+GP+S+AIDAS ++FQFYS+GVYY+  C+
Sbjct: 225 RYNPKNSGADDVGFVDIPQGDEEKLMQAVATVGPISVAIDASQETFQFYSKGVYYDENCS 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH V+VVGYGT+E G DYWLVKNSW  +WG+ GYIKMA N+
Sbjct: 285 STDLDHGVMVVGYGTEEEGGDYWLVKNSWGRSWGELGYIKMAHNK 329


>gi|21953244|emb|CAD42716.1| putative cathepsin L [Myzus persicae]
          Length = 341

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 120/233 (51%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 193 MDLAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 222 RYNPDNSGATDNGFVDIPEGDEEALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPRCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST+LDH VL VG+ TD+ G DYW+VKNSW  TWGDEGYI MARN+               
Sbjct: 282 STELDHGVLAVGFRTDKKGGDYWIVKNSWGKTWGDEGYIMMARNK--------------- 326

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCGVASSAS+PLV
Sbjct: 327 --------------------------------------KNNCGVASSASYPLV 341


>gi|957281|gb|AAB33990.1| cysteine proteinase [Bombyx mori]
          Length = 344

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/165 (57%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYE +                               DD C
Sbjct: 196 MDNAFKYIKDNGGIDTEQAYPYEGV-------------------------------DDKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA D G+VDIPEGDE KL  AVAT+GPVS+AIDASH  FQ YS GVY E EC+
Sbjct: 225 RYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTHFQLYSSGVYNEEECS 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYGTDE G DYWLVKNSW  +WG+ GYIKM RN+
Sbjct: 285 STDLDHGVLVVGYGTDEQGVDYWLVKNSWGRSWGELGYIKMIRNK 329


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  186 bits (472), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 109/165 (66%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY+ DN GIDTESSYPYEA                                D  C
Sbjct: 183 MDKAFQYVSDNKGIDTESSYPYEAR-------------------------------DYAC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+ K G  D+GYVDIPEGDE  L+ A+AT+GP+S+AIDASH+SF FYSEGVY EP C+
Sbjct: 212 RFKKDKVGGTDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEGVYNEPYCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT ENG DYWLVKNSW  +WG+ GYIK+ARN 
Sbjct: 272 SYDLDHGVLAVGYGT-ENGQDYWLVKNSWGPSWGESGYIKIARNH 315


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  186 bits (472), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 93/164 (56%), Positives = 112/164 (68%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+N GID+E+SYPY                               T+ D  C
Sbjct: 177 MDNAFTYIKENKGIDSEASYPY-------------------------------TAEDGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++   A D G+VDIPEG+E KLK AVA++GP+S+AIDASH+SFQFYS GVY EP C+
Sbjct: 206 VFKKSSVAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VLVVGYGT E+G DYWLVKNSWNT+WGD+GYIKM RN
Sbjct: 266 STELDHGVLVVGYGT-ESGKDYWLVKNSWNTSWGDKGYIKMRRN 308


>gi|253796148|gb|ACT35690.1| cathepsin L-like cysteine proteinase [Ditylenchus destructor]
          Length = 376

 Score =  185 bits (470), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+NHGIDTE+SYPY+A                                   C
Sbjct: 228 MDFAFQYIKENHGIDTETSYPYKARQK-------------------------------KC 256

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            ++R+  GA D G++D+PEGDE +LK AVAT GP+S+AIDA H+SFQ Y  GVYYE EC+
Sbjct: 257 HFQRSSVGADDTGFMDLPEGDEDQLKIAVATQGPISVAIDAGHRSFQLYKTGVYYEKECS 316

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYGTD +  DYW+VKNSW TTWG++GY++MARN+
Sbjct: 317 SEQLDHGVLVVGYGTDPDHGDYWIVKNSWGTTWGEQGYVRMARNK 361


>gi|121543825|gb|ABM55577.1| putative cathepsin L-like protease [Maconellicoccus hirsutus]
          Length = 341

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/167 (56%), Positives = 109/167 (65%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N GIDTE SYPYE +                               DD C
Sbjct: 192 MDNAFAYIKSNKGIDTEQSYPYEGI-------------------------------DDKC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK  +SGA D+G+VDIP+GDE KLK AVAT+GP+S+AIDASHQSFQFY +GVYY+  C 
Sbjct: 221 RYKPQESGATDKGFVDIPQGDEEKLKLAVATVGPISVAIDASHQSFQFYKKGVYYDKGCG 280

Query: 121 STQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +  LDH VL VGYGT ENG DYWLVKNSW   WG +GYIKMARN+
Sbjct: 281 NGEEDLDHGVLAVGYGT-ENGKDYWLVKNSWGKRWGLDGYIKMARNK 326


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 109/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPY A                                D+ C
Sbjct: 190 MDNAFRYIKDNGGIDTEKSYPYLAE-------------------------------DEKC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA D+G+VDI E +E  LKAAVAT+GPVSIAIDASH++FQ YS+GVY +PEC+
Sbjct: 219 HYKAQNSGATDKGFVDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDGVYSDPECS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGT ++G DYWLVKNSW  +WG  GYIKMARN+
Sbjct: 279 SQELDHGVLVVGYGTSDDGQDYWLVKNSWGPSWGLNGYIKMARNQ 323


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/164 (56%), Positives = 111/164 (67%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+N GID+E+SYPY                               T+ D  C
Sbjct: 177 MDNAFTYIKENKGIDSEASYPY-------------------------------TAEDGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+    A D G+VD+PEG+E KLK AVA++GP+S+AIDASH+SFQFYS GVY EP C+
Sbjct: 206 VFKKPSVAATDTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYNEPSCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VLVVGYGT E+G DYWLVKNSWNT+WGD+GYIKM RN
Sbjct: 266 STELDHGVLVVGYGT-ESGKDYWLVKNSWNTSWGDKGYIKMRRN 308


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 108/165 (65%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPY                                  D  C
Sbjct: 188 MDNAFKYIRANKGIDTEKSYPYNGT-------------------------------DGTC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++  GA D G+VDI EG E +LK AVAT+GP+S+AIDASH+SFQFYS+GVY EPEC+
Sbjct: 217 HFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYDEPECD 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGT  NG DYWLVKNSW TTWGDEGYI+M+RN+
Sbjct: 277 SESLDHGVLVVGYGT-LNGTDYWLVKNSWGTTWGDEGYIRMSRNK 320


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  182 bits (463), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 107/165 (64%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPY                                  D  C
Sbjct: 188 MDDAFKYIRANKGIDTEKSYPYNGT-------------------------------DGTC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++  GA D G+VDI EG E +LK AVAT+GP+S+AIDASH+SFQFYS+GVY EPEC+
Sbjct: 217 HFKKSTVGATDSGFVDIKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYDEPECD 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGT  NG DYW VKNSW TTWGDEGYI+M+RN+
Sbjct: 277 SESLDHGVLVVGYGT-LNGTDYWFVKNSWGTTWGDEGYIRMSRNK 320


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+ DN GIDTE+SYPYEA                                ++ C
Sbjct: 183 MDQAFQYVSDNKGIDTEASYPYEAR-------------------------------ENTC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+ K G  D+G+VDIP GDE  L+ A+AT+GP+S+AIDA+H SFQFYS+GVY EP C+
Sbjct: 212 RFKKNKVGGTDKGHVDIPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGVYNEPNCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT ENG DYWLVKNSW  +WG+ GYIK+ARN 
Sbjct: 272 SYDLDHGVLAVGYGT-ENGQDYWLVKNSWGPSWGENGYIKIARNH 315


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  182 bits (463), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/166 (56%), Positives = 109/166 (65%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+N GIDTE++YPY                                  D+  
Sbjct: 189 MDNAFRYIKNNGGIDTEAAYPY-------------------------------MGEDEKF 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GA D+G+VDIP GDE KLKAAVAT+GP+SIAIDASH+SFQ YS GVY +P C+
Sbjct: 218 RYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIAIDASHESFQLYSNGVYSDPTCS 277

Query: 121 STQLDHAVLVVGYGTDEN-GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGYGTDE  G DYWLVKNSW  TWG +GYIKMARN+
Sbjct: 278 STELDHGVLVVGYGTDEKTGMDYWLVKNSWGDTWGLDGYIKMARNQ 323


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 104/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE SYPYEA                                D  C
Sbjct: 178 MDQAFRYIKANKGIDTEDSYPYEAQ-------------------------------DGKC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D GYVD+  G E  LK AVATIGP+S+ IDAS  +F FY  GVY++  C+
Sbjct: 207 RFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYG+DENG D+WLVKNSWNT+WGD+GYIKM+RNR
Sbjct: 267 STMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNR 311


>gi|17224950|gb|AAL37181.1|AF320084_1 cathepsin L-like protease [Ancylostoma caninum]
          Length = 214

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE SYPY                                  D  C
Sbjct: 66  MDLAFEYIKDNHGIDTEESYPY-------------------------------VGRDMKC 94

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GAVD GYVD+PEGDE  LK AVAT GP+SIAIDA H++FQ Y +GVYY+ EC+
Sbjct: 95  HFKKKDIGAVDNGYVDLPEGDEEALKIAVATQGPISIAIDAGHRTFQLYKKGVYYDEECS 154

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW T WG++GYI++ARNR
Sbjct: 155 SEELDHGVLLVGYGTDPEAGDYWLVKNSWGTGWGEKGYIRIARNR 199


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 107/165 (64%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPY                                  D  C
Sbjct: 190 MDNAFKYIKANGGIDTEKSYPYNGT-------------------------------DGTC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++  GA D G+VDIPEG+E+ LK AVAT+GP+S+AIDASHQSFQFYS+GVY EPEC+
Sbjct: 219 HFKKSDVGATDTGFVDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPECS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGT ++  DYWLVKNSW TTWGD GYI M RN+
Sbjct: 279 SENLDHGVLVVGYGTKDD-QDYWLVKNSWGTTWGDGGYIYMTRNK 322


>gi|32394728|gb|AAM96000.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 322

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 121/233 (51%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK+N GIDTE SYPYEA                                D  C
Sbjct: 174 MDQAFKYIKENKGIDTEESYPYEAQ-------------------------------DGKC 202

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D G+VDI  G+E  L  AVA IGP+S+AIDASH SFQFY +GVYYE EC+
Sbjct: 203 RFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECS 262

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST LDH VL +GYG  ++G +YWLVKNSWNT+WGD+G+I+M+RN+               
Sbjct: 263 STMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNK--------------- 307

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+AS AS+PLV
Sbjct: 308 --------------------------------------KNNCGIASQASYPLV 322


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 104/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE SYPYEA                                D  C
Sbjct: 177 MDQAFRYIKANKGIDTEDSYPYEAQ-------------------------------DGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D GYVD+  G E  LK AVATIGP+S+ IDAS  +F FY  GVY++  C+
Sbjct: 206 RFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYG+DENG D+WLVKNSWNT+WGD+GYIKM+RNR
Sbjct: 266 STMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYIKMSRNR 310


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 108/165 (65%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK N GIDTE SYPYEA                                D+ C
Sbjct: 194 MDNAFQYIKVNGGIDTEKSYPYEAE-------------------------------DEPC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A +GA DRG+VD+ EG+E  LK A+ATIGPVS+AIDAS  SFQFY  GVY +P+C+
Sbjct: 223 RYNPANAGADDRGFVDVREGNENALKKAIATIGPVSVAIDASQDSFQFYQHGVYSDPDCS 282

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VL VGYGT E+G DYWLVKNSW+ +WGD+GYIK+ARN+
Sbjct: 283 AENLDHGVLAVGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQ 327


>gi|32394730|gb|AAM96001.1| cathepsin L precursor [Metapenaeus ensis]
          Length = 306

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 121/233 (51%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK+N GIDTE SYPYEA                                D  C
Sbjct: 158 MDQAFKYIKENKGIDTEESYPYEAQ-------------------------------DGKC 186

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D G+VDI  G+E  L  AVA IGP+S+AIDASH SFQFY +GVYYE EC+
Sbjct: 187 RFDSSNVGATDTGFVDIAHGEENSLMKAVANIGPISVAIDASHPSFQFYHQGVYYEKECS 246

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST LDH VL +GYG  ++G +YWLVKNSWNT+WGD+G+I+M+RN+               
Sbjct: 247 STMLDHGVLAIGYGETDDGKEYWLVKNSWNTSWGDKGFIQMSRNK--------------- 291

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+AS AS+PLV
Sbjct: 292 --------------------------------------KNNCGIASQASYPLV 306


>gi|268560858|ref|XP_002638172.1| C. briggsae CBR-CPL-1 protein [Caenorhabditis briggsae]
          Length = 336

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 107/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI+DNHG+DTE SYPY+                                 D  C
Sbjct: 188 MDQAFEYIRDNHGVDTEESYPYKGR-------------------------------DMKC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D+GYVD PEGDE +LK AVAT GP+SIAIDA H+SFQ Y +GVYY+ EC+
Sbjct: 217 HFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECS 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW T WG++GYI++ARNR
Sbjct: 277 SEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNR 321


>gi|341878328|gb|EGT34263.1| CBN-CPL-1 protein [Caenorhabditis brenneri]
          Length = 336

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 107/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI+DNHG+DTE SYPY+                                 D  C
Sbjct: 188 MDQAFEYIRDNHGVDTEESYPYKGR-------------------------------DMKC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D+GYVD PEGDE +LK AVAT GP+SIAIDA H+SFQ Y +GVYY+ EC+
Sbjct: 217 HFNKKTIGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECS 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW T WG++GYI++ARNR
Sbjct: 277 SEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNR 321


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 122/233 (52%), Gaps = 85/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPY                                  D  C
Sbjct: 211 MDNAFKYIKANGGIDTELSYPYNGT-------------------------------DGIC 239

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            ++++  GA D G+VDIPEG+E  LK AVAT+GPVS+AIDASH+SFQFYS+GVY EPEC+
Sbjct: 240 HFEKSDVGATDTGFVDIPEGNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECS 299

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           S  LDH VLVVGYGT ++G DYWLVKNSW TTWGD+GYI M RN+               
Sbjct: 300 SESLDHGVLVVGYGT-KDGQDYWLVKNSWGTTWGDDGYIYMTRNK--------------- 343

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 EN CG+ASSAS+PLV
Sbjct: 344 --------------------------------------ENQCGIASSASYPLV 358


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/164 (54%), Positives = 109/164 (66%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+QAFQY++DN GIDTE+SYPYEA                                ++NC
Sbjct: 169 MNQAFQYVRDNKGIDTEASYPYEAR-------------------------------ENNC 197

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K  K G  D+GYVDI E  E  L++AVAT+GP+S+ IDASH+SFQFYSEGVY E  C+
Sbjct: 198 RFKEDKVGGTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESFQFYSEGVYKEQYCS 257

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            +QLDH VL VGYGT ENG DYWLVKNSW  +WG+ GYIK+ARN
Sbjct: 258 PSQLDHGVLTVGYGT-ENGQDYWLVKNSWGPSWGESGYIKIARN 300


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 107/165 (64%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N+GIDTE+SYPYE                                 DD C
Sbjct: 178 MDDAFEYIKLNNGIDTEASYPYEGR-------------------------------DDIC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK+   GA+D GY+DI +  E  LKAAVAT+GP+S+AIDASH+SF  Y  GVY+EPEC+
Sbjct: 207 RYKKTNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKSFHMYHTGVYHEPECS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VLVVGYGT ENG DYWLVKNSW T WG  GYIKM+RNR
Sbjct: 267 QTVLDHGVLVVGYGT-ENGEDYWLVKNSWGTDWGMNGYIKMSRNR 310


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N GID+E SYPYEA+                               D  C
Sbjct: 177 MDNAFTYIKKNMGIDSEKSYPYEAV-------------------------------DGEC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK++ S   D G+VDIP GDE  L+ AVA++GPVS+AIDASH SFQFY  GVY E  C+
Sbjct: 206 RYKKSDSVTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VLVVGYG  ENG DYWLVKNSW  +WG+ GYIK+ARN 
Sbjct: 266 STQLDHGVLVVGYGV-ENGQDYWLVKNSWGASWGEAGYIKLARNH 309


>gi|308474437|ref|XP_003099440.1| CRE-CPL-1 protein [Caenorhabditis remanei]
 gi|308266846|gb|EFP10799.1| CRE-CPL-1 protein [Caenorhabditis remanei]
          Length = 337

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 107/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI+DNHG+DTE SYPY+                                 D  C
Sbjct: 189 MDQAFEYIRDNHGVDTEDSYPYKGR-------------------------------DMKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D+GY D+PEGDE +LK AVAT GP+SIAIDA H+SFQ Y +GVYY+ EC+
Sbjct: 218 HFSKKDVGADDKGYTDLPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW T WG++GYI++ARNR
Sbjct: 278 SEELDHGVLLVGYGTDPEHGDYWLVKNSWGTGWGEKGYIRIARNR 322


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 109/165 (66%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPY A                                D+ C
Sbjct: 190 MDNAFRYIKDNGGIDTEQSYPYLAE-------------------------------DEKC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA D+G+VDI EG+E  LKAAVAT+GPVSIAIDAS+++FQ YS+GVY +PEC+
Sbjct: 219 HYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPVSIAIDASYETFQLYSDGVYSDPECS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGT ++G DYWLVKNSW  + G  GYIKMARN+
Sbjct: 279 SQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMARNQ 323


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  179 bits (454), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 93/164 (56%), Positives = 104/164 (63%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQYIKDN G DTE+ YPYEA+                               D  C
Sbjct: 203 VDYAFQYIKDNDGDDTEACYPYEAV-------------------------------DGTC 231

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K    GA   GY D+P+GDE K+K AVA +GPVS+AIDASH SFQ Y  G+Y E EC+
Sbjct: 232 RFKSVCVGATCTGYTDLPKGDEAKMKEAVALVGPVSVAIDASHSSFQMYQSGIYVEQECS 291

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             QLDHAVLVVGYGT E G DYWLVKNSW TTWGDEGYIKMARN
Sbjct: 292 PKQLDHAVLVVGYGT-EQGQDYWLVKNSWGTTWGDEGYIKMARN 334


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/164 (56%), Positives = 103/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N GIDTE+ YPYE                                 D  C
Sbjct: 178 MDNAFSYIKANGGIDTETGYPYEGQ-------------------------------DGTC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY ++  GA D G+VDIPEGDE  LK AVAT+GPVS+AIDASH SFQFY  GVY EP+C+
Sbjct: 207 RYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + LDH VLVVGYGTD NG DYWLVKNSW T WG EGYI M+RN
Sbjct: 267 PSALDHGVLVVGYGTD-NGKDYWLVKNSWGTGWGTEGYIYMSRN 309


>gi|324512246|gb|ADY45078.1| Cathepsin L [Ascaris suum]
          Length = 388

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHG+DTE+SYPY+                                 +  C
Sbjct: 240 MDYAFEYIKDNHGVDTEASYPYKGK-------------------------------EMKC 268

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D GYVD+PEGDE KLK AVAT GP+S+AIDA H SFQ Y +GVYYEP+C+
Sbjct: 269 HFNKKTVGAEDEGYVDLPEGDEEKLKIAVATQGPISVAIDAGHPSFQMYRKGVYYEPQCS 328

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGTDE   DYW+VKNSW   WG++GY+++ARNR
Sbjct: 329 SESLDHGVLVVGYGTDEIDGDYWIVKNSWGPGWGEKGYVRIARNR 373


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/164 (54%), Positives = 110/164 (67%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+N+GID+E+SYPY                               T+ D  C
Sbjct: 177 MDNAFTYIKENNGIDSEASYPY-------------------------------TAKDGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +    A D G+VDIP GDE KLK AVA++GP+S+AIDASH SFQFY +GVY E +C+
Sbjct: 206 AFTKPNVAATDTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQFYRKGVYNERKCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VLVVGYGT E+G DYWLVKNSWNT+WGD+GYIKM+RN
Sbjct: 266 STELDHGVLVVGYGT-ESGKDYWLVKNSWNTSWGDKGYIKMSRN 308


>gi|392922426|ref|NP_001256718.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
 gi|3879367|emb|CAB07275.1| Protein CPL-1, isoform a [Caenorhabditis elegans]
          Length = 337

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI+DNHG+DTE SYPY+                                 D  C
Sbjct: 189 MDQAFEYIRDNHGVDTEESYPYKGR-------------------------------DMKC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D+GYVD PEGDE +LK AVAT GP+SIAIDA H+SFQ Y +GVYY+ EC+
Sbjct: 218 HFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYW+VKNSW   WG++GYI++ARNR
Sbjct: 278 SEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRIARNR 322


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 103/165 (62%), Gaps = 30/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE SYPY+ +                                  C
Sbjct: 249 MDNAFEYIKDNHGIDTEESYPYKGVEG------------------------------KKC 278

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            ++R   GA D GY D+PEGDE  LK AVATIGP+S+AIDA H SFQ Y +G+Y E EC+
Sbjct: 279 HFRRKFVGAEDYGYTDLPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGIYTENECS 338

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGYGTDEN  DYW+VKNSW T WG+ GYI+MARN+
Sbjct: 339 PEDLDHGVLVVGYGTDENAGDYWIVKNSWGTRWGEHGYIRMARNK 383


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+NHG+DTE SYPY                                  +  C
Sbjct: 207 MDLAFEYIKENHGVDTEDSYPY-------------------------------VGRETKC 235

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D+G+VD+PEGDE  LK AVAT GP+SIAIDA H+SFQ Y +GVY++ EC+
Sbjct: 236 HFKRNTVGADDKGFVDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECS 295

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW  TWG++GYI++ARNR
Sbjct: 296 SEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNR 340


>gi|21483194|gb|AAL49964.1| cathepsin L [Ascaris suum]
          Length = 169

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHG+DTE+SYPY+                                 +  C
Sbjct: 21  MDYAFEYIKDNHGVDTEASYPYKGK-------------------------------EMKC 49

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D GYVD+PEGDE KLK AVAT GP+S+AIDA H SFQ Y +GVYYEP+C+
Sbjct: 50  HFNKKTVGAEDEGYVDLPEGDEEKLKVAVATQGPISVAIDAGHPSFQMYRKGVYYEPQCS 109

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYGTDE   DYW+VKNSW   WG++GY+++ARNR
Sbjct: 110 SESLDHGVLVVGYGTDEIDGDYWIVKNSWGPGWGEKGYVRIARNR 154


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+NHG+DTE SYPY                                  +  C
Sbjct: 206 MDLAFEYIKENHGVDTEDSYPY-------------------------------VGRETKC 234

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D+G+VD+PEGDE  LK AVAT GP+SIAIDA H+SFQ Y +GVY++ EC+
Sbjct: 235 HFKRNAVGADDKGFVDLPEGDEEALKKAVATQGPISIAIDAGHRSFQLYKKGVYFDEECS 294

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWLVKNSW  TWG++GYI++ARNR
Sbjct: 295 SEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNR 339


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 108/165 (65%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE SYPY A                                D+ C
Sbjct: 190 MDNAFRYIKDNGGIDTEQSYPYLAE-------------------------------DEKC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA D+G+VDI EG+E  LKAAVAT+GP+SIAIDAS+++FQ YS+GVY +PEC 
Sbjct: 219 HYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPISIAIDASYETFQLYSDGVYSDPECI 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGT ++G DYWLVKNSW  + G  GYIKMARN+
Sbjct: 279 SQELDHGVLVVGYGTSDDGQDYWLVKNSWRPSCGLNGYIKMARNQ 323


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 105/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQYIK N GIDTE SYPYEA                                DD C
Sbjct: 181 MVQAFQYIKGNGGIDTEGSYPYEAE-------------------------------DDKC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK       D+GYVDI +GDE  LK AVA IGP+S+AIDA + SFQFYSEG+Y EP C+
Sbjct: 210 RYKTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQFYSEGIYDEPFCS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T+LDH VLVVGYGT ENG DYWLVKNSW  +WG+ GYIK+ARN 
Sbjct: 270 NTELDHGVLVVGYGT-ENGQDYWLVKNSWGPSWGENGYIKIARNH 313


>gi|392922428|ref|NP_001256719.1| Protein CPL-1, isoform b [Caenorhabditis elegans]
 gi|379657173|emb|CCG28194.1| Protein CPL-1, isoform b [Caenorhabditis elegans]
          Length = 198

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI+DNHG+DTE SYPY+                                 D  C
Sbjct: 50  MDQAFEYIRDNHGVDTEESYPYKGR-------------------------------DMKC 78

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA D+GYVD PEGDE +LK AVAT GP+SIAIDA H+SFQ Y +GVYY+ EC+
Sbjct: 79  HFNKKTVGADDKGYVDTPEGDEEQLKIAVATQGPISIAIDAGHRSFQLYKKGVYYDEECS 138

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYW+VKNSW   WG++GYI++ARNR
Sbjct: 139 SEELDHGVLLVGYGTDPEHGDYWIVKNSWGAGWGEKGYIRIARNR 183


>gi|158268253|gb|ABW25046.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 105/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE SYPY                                  +  C
Sbjct: 206 MDLAFEYIKDNHGIDTEESYPY-------------------------------VGRETKC 234

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA D+G+VD+PEGDE  LK AVAT GP+SIAIDA H++FQ Y +GVYY+ EC+
Sbjct: 235 HFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEECS 294

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWL+KNSW   WG++GYI++ARNR
Sbjct: 295 SEELDHGVLLVGYGTDPEAGDYWLIKNSWGPGWGEKGYIRIARNR 339


>gi|158268255|gb|ABW25047.1| cathepsin L-like protease [Strongylus vulgaris]
          Length = 354

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 105/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE SYPY                                  +  C
Sbjct: 206 MDLAFEYIKDNHGIDTEESYPY-------------------------------VGRETKC 234

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA D+G+VD+PEGDE  LK AVAT GP+SIAIDA H++FQ Y +GVYY+ EC+
Sbjct: 235 HFKKKDIGAEDKGFVDLPEGDEEALKVAVATQGPISIAIDAGHRTFQLYKKGVYYDEECS 294

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYWL+KNSW   WG++GYI++ARNR
Sbjct: 295 SEELDHGVLLVGYGTDPEAGDYWLIKNSWGPGWGEKGYIRIARNR 339


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 120/233 (51%), Gaps = 85/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+QAFQY++DN GIDTE +YPYE                                 D  C
Sbjct: 183 MEQAFQYVRDNDGIDTEEAYPYEGE-------------------------------DSEC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+V IP GDE  L  AVAT GP+SIAIDAS+ SFQFYSEGVYYEPEC+
Sbjct: 212 RFKKNNVGATDAGFVTIPSGDEQALMEAVATQGPLSIAIDASNPSFQFYSEGVYYEPECS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           S QLDH VL+VGYG +++   YWLVKNSW+  WG+ GYIKMARN+               
Sbjct: 272 SAQLDHGVLLVGYGVEKD-QKYWLVKNSWSEQWGENGYIKMARNK--------------- 315

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+A+ ASFP+V
Sbjct: 316 --------------------------------------DNNCGIATQASFPIV 330


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK N GIDTE SYPYEA                                D  C
Sbjct: 186 MDNAFQYIKANGGIDTEKSYPYEAE-------------------------------DGEC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+VDI +G E  LK AVAT+GPVS+AIDASH SFQ YSEGVY E EC+
Sbjct: 215 RFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYG  E+G  YWLVKNSW  +WGD GYIKM+R++
Sbjct: 275 SEQLDHGVLVVGYGV-EDGKKYWLVKNSWAESWGDNGYIKMSRDK 318


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/165 (56%), Positives = 103/165 (62%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G DTE SYPYEA                                D  C
Sbjct: 204 MDYAFQYIKDNDGDDTEDSYPYEA-------------------------------ADGPC 232

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GY D+P+GDE K+K AVA +GPVS+AIDASH SFQ Y  GVY E EC+
Sbjct: 233 RFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVYDEVECD 292

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGYGT E G DYWLVKNSW T WGDEGYIKM+RN+
Sbjct: 293 PEGLDHGVLVVGYGT-ELGQDYWLVKNSWGTKWGDEGYIKMSRNK 336


>gi|390994425|gb|AFM37362.1| cathepsin L2 [Dictyocaulus viviparus]
          Length = 352

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 105/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE  YPY                                  +  C
Sbjct: 204 MDLAFEYIKDNHGIDTEEGYPY-------------------------------VGKEMRC 232

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA DRG+VD+PEGDE  LK AVAT GP+SIAIDA H+SFQ Y +GVY++ EC+
Sbjct: 233 HFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECS 292

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYW++KNSW T WG++GY+++ARNR
Sbjct: 293 SEELDHGVLLVGYGTDPEAGDYWIIKNSWGTKWGEKGYVRIARNR 337


>gi|198427748|ref|XP_002130282.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 340

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 92/164 (56%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK   GIDTE+ YPYEA                                DD C
Sbjct: 193 MDQAFKYIKIQGGIDTEAYYPYEAK-------------------------------DDTC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+    SGA D G+VDI  GDE  LK A AT+GP+S+AIDASH SFQFYS GVY E  C+
Sbjct: 222 RFNITDSGATDTGFVDIKSGDEEMLKEAAATVGPISVAIDASHTSFQFYSNGVYSETACS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST LDH VLVVGYGT ENG DYWLVKNSW   WG+ GYIKM+RN
Sbjct: 282 STMLDHGVLVVGYGT-ENGKDYWLVKNSWGEGWGEAGYIKMSRN 324


>gi|21483188|gb|AAK77918.1| cathepsin L 1 [Dictyocaulus viviparus]
          Length = 347

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 105/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE  YPY                                  +  C
Sbjct: 199 MDLAFEYIKDNHGIDTEEGYPY-------------------------------VGKEMRC 227

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA DRG+VD+PEGDE  LK AVAT GP+SIAIDA H+SFQ Y +GVY++ EC+
Sbjct: 228 HFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECS 287

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYW++KNSW T WG++GY+++ARNR
Sbjct: 288 SEELDHGVLLVGYGTDPEAGDYWIIKNSWGTKWGEKGYVRIARNR 332


>gi|21483190|gb|AAL14223.1| cathepsin L [Dictyocaulus viviparus]
          Length = 347

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 105/165 (63%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHGIDTE  YPY                                  +  C
Sbjct: 199 MDLAFEYIKDNHGIDTEEGYPY-------------------------------VGKEMRC 227

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA DRG+VD+PEGDE  LK AVAT GP+SIAIDA H+SFQ Y +GVY++ EC+
Sbjct: 228 HFKKRDIGAEDRGFVDLPEGDEDALKVAVATQGPISIAIDAGHRSFQLYKKGVYFDEECS 287

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGYGTD    DYW++KNSW T WG++GY+++ARNR
Sbjct: 288 SEELDHGVLLVGYGTDPEAGDYWIIKNSWGTKWGEKGYVRIARNR 332


>gi|194246073|gb|ACF35528.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 151

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 92/165 (55%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK N GIDTE SYPYEA                                D  C
Sbjct: 4   MDNAFQYIKANGGIDTEKSYPYEAE-------------------------------DGEC 32

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+VDI +G E  LK AVAT+GPVS+AIDASH SFQ YSEGVY E EC+
Sbjct: 33  RFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECS 92

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYG  E+G  YWLVKNSW  +WGD GYIKM+R++
Sbjct: 93  SEQLDHGVLVVGYGV-EDGKKYWLVKNSWAESWGDNGYIKMSRDK 136


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK+N+GIDTE SYPYEA+                               D+ C
Sbjct: 186 MDQAFEYIKENNGIDTEDSYPYEAV-------------------------------DNQC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K A  GA D G+ DI   DE  L+ AVAT+GP+S+AIDA H SFQ Y  GVY EP C+
Sbjct: 215 RFKAANVGATDTGFTDITSKDESALQQAVATVGPISVAIDAGHTSFQLYKHGVYNEPFCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYGTD +G DYWLVKNSW   WGD+GYIKM RN+
Sbjct: 275 QTRLDHGVLAVGYGTD-SGKDYWLVKNSWGEGWGDKGYIKMTRNK 318


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  176 bits (445), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 117/233 (50%), Gaps = 84/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE SYPYEA                                D  C
Sbjct: 180 MDQAFRYIKANKGIDTEDSYPYEAQ-------------------------------DGKC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D GYVD+  G E  LK AVATIGP+S+AIDAS  SFQFY +GVYYE  C+
Sbjct: 209 RFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVAIDASQPSFQFYHDGVYYEEGCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
           ST LDH VL VGYG  E G  YWLVKNSWNT+WG++GYI+M+R++               
Sbjct: 269 STMLDHGVLAVGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDK--------------- 313

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+AS AS+PLV
Sbjct: 314 --------------------------------------KNNCGIASQASYPLV 328


>gi|2239107|emb|CAA70693.1| cathepsin L-like cysteine proteinase [Heterodera glycines]
          Length = 374

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/233 (42%), Positives = 114/233 (48%), Gaps = 83/233 (35%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GID E++YPY+A                                   C
Sbjct: 225 MDNAFQYIKDNKGIDKETAYPYKAKTG------------------------------KKC 254

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D GY DI EGDE  LK AVAT GPVS+AIDA H+SFQ Y+          
Sbjct: 255 LFKRNDVGATDSGYNDIAEGDEEDLKMAVATQGPVSVAIDAGHRSFQLYT---------- 304

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
                                                      N VY+E EC+   LDH 
Sbjct: 305 -------------------------------------------NGVYFEKECDPENLDHG 321

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           VLVVGYGTD    DYW+VKNSW T WG++GYI+MARNR NNCG+AS ASFPLV
Sbjct: 322 VLVVGYGTDPTQGDYWIVKNSWGTRWGEQGYIRMARNRNNNCGIASHASFPLV 374


>gi|261289783|ref|XP_002611753.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
 gi|229297125|gb|EEN67763.1| hypothetical protein BRAFLDRAFT_236364 [Branchiostoma floridae]
          Length = 307

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPYEA                                D  C
Sbjct: 160 MDDAFKYIKANGGIDTEDSYPYEAR-------------------------------DGKC 188

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K A  GA   GY DI EGDE  L  AVAT+GP+S+AIDASH +FQ YS GVYYEP+C+
Sbjct: 189 RFKPADVGATVTGYTDISEGDEGALTQAVATVGPISVAIDASHHTFQMYSHGVYYEPQCS 248

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VL VGYGT E G DYWLVKNSW   WG  GYI M+RN+
Sbjct: 249 STELDHGVLAVGYGT-EGGKDYWLVKNSWGEVWGQNGYIMMSRNK 292


>gi|66378018|gb|AAY45870.1| cathepsin L-like cysteine proteinase [Rotylenchulus reniformis]
          Length = 369

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 101/165 (61%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GID E +YPY+A                                   C
Sbjct: 221 MDNAFQYIKDNEGIDKEMTYPYKAKAG-------------------------------RC 249

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ D+ EGDE KLK AVAT GPVS+AIDA H+SFQ Y  GVY+E ECN
Sbjct: 250 HFKRNDVGATDTGFFDVAEGDEDKLKLAVATQGPVSVAIDAGHRSFQLYKHGVYFEEECN 309

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +LDH VLVVGYGTD    DYW+VKNSW+T WG++GYI+MA NR
Sbjct: 310 PEELDHGVLVVGYGTDPEHGDYWIVKNSWSTHWGEQGYIRMAPNR 354


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 91/167 (54%), Positives = 105/167 (62%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++ N GIDTE SYPYE                                 +D C
Sbjct: 194 MDQAFQYVRINGGIDTERSYPYEG-------------------------------NNDVC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY+   SGA+D GY D+P GDE  LK+AVAT+GPVS+AIDAS +SFQ YS GVY+EP C 
Sbjct: 223 RYEPENSGAIDTGYTDVPLGDEDALKSAVATVGPVSVAIDASQESFQLYSSGVYFEPNCK 282

Query: 121 S--TQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +    LDH VLVVGYGTD E   DYWLVKNSW  +WG+ GYIKMARN
Sbjct: 283 NEPESLDHGVLVVGYGTDEETQQDYWLVKNSWGDSWGENGYIKMARN 329


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPYEAM                               D +C
Sbjct: 165 MDNAFKYIKANDGIDTEESYPYEAM-------------------------------DGDC 193

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+VDI +G E  L+ AVAT+GP+S+AIDASH SFQ YSEGVY EP C+
Sbjct: 194 RFKKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDASHSSFQLYSEGVYDEPNCS 253

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGYG  +NG  YWLVKNSW  TWGD GYI M+R++
Sbjct: 254 SEELDHGVLAVGYGV-KNGKKYWLVKNSWAETWGDNGYILMSRDK 297


>gi|225709022|gb|ACO10357.1| Cathepsin L precursor [Caligus rogercresseyi]
          Length = 332

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/166 (53%), Positives = 105/166 (63%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI+DN GIDTE SYPYE +                                  C
Sbjct: 183 MDFAFTYIRDNKGIDTEGSYPYEGV-------------------------------GGRC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +K G+ D G+VD+ +G E +L  AVA++GPVS+AIDASH SFQFYS GVY+E +C+
Sbjct: 212 HYDPSKKGSSDIGFVDVKKGSEEELLKAVASVGPVSVAIDASHMSFQFYSHGVYFESKCS 271

Query: 121 STQLDHAVLVVGYGTDEN-GNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGYGTDEN G DYWLVKNSW+  WGD+GYIKMARN+
Sbjct: 272 PENLDHGVLVVGYGTDENSGEDYWLVKNSWSENWGDQGYIKMARNK 317


>gi|387015022|gb|AFJ49630.1| Cathepsin L1-like [Crotalus adamanteus]
          Length = 338

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/169 (52%), Positives = 106/169 (62%), Gaps = 34/169 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN+GID+E SYPY                              +   D++C
Sbjct: 185 MDQAFQYIKDNNGIDSEESYPY------------------------------IGKDDEDC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   + A D G+VDIPEG E  L  AVA +GP+S+AIDASH SFQFY  GVYYEP+CN
Sbjct: 215 LYKPEYNSANDTGFVDIPEGRERALMKAVAAVGPISVAIDASHTSFQFYESGVYYEPQCN 274

Query: 121 STQLDHAVLVVGYG----TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYG     D+N   YW+VKNSW+  WGD+GYI MA++R
Sbjct: 275 SEELDHGVLVVGYGYEGTDDDNKKRYWIVKNSWSEKWGDQGYIHMAKDR 323


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GID E SYPYEAM                               DD C
Sbjct: 185 MDNAFKYIKANDGIDAEESYPYEAM-------------------------------DDKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+VDI  G E  LK AVAT+GP+S+AIDA H SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGYG  ++G  YWLVKNSW  +WGD GYI M+R++
Sbjct: 274 SEELDHGVLAVGYGV-KDGKKYWLVKNSWGGSWGDNGYILMSRDK 317


>gi|46251290|gb|AAS84611.1| cathepsin L-like cysteine proteinase I variant form precursor
           [Heterodera glycines]
          Length = 374

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 113/233 (48%), Gaps = 83/233 (35%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GID E++YPY+A                                   C
Sbjct: 225 MDNAFQYIKDNKGIDKETAYPYKAKTG------------------------------KKC 254

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D GY DI EGDE  L+ AVAT GPVS+AIDA H+SFQ Y+          
Sbjct: 255 LFKRNDVGATDSGYNDIAEGDEEDLRMAVATQGPVSVAIDAGHRSFQLYT---------- 304

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
                                                      N VY+E EC+   LDH 
Sbjct: 305 -------------------------------------------NGVYFEKECDPQNLDHG 321

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           VLV GYGTD    DYW+VKNSW T WG++GYI+MARNR NNCG+AS ASFPLV
Sbjct: 322 VLVEGYGTDPTQGDYWIVKNSWGTRWGEQGYIRMARNRNNNCGIASHASFPLV 374


>gi|229367042|gb|ACQ58501.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/165 (54%), Positives = 103/165 (62%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPYEA                                D  C
Sbjct: 187 MDSAFRYIQANGGIDTEDSYPYEAE-------------------------------DGQC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A  GA   GYVD+ +GDE  LK AVATIGPVS+AIDASH SFQ Y  GVY EPEC+
Sbjct: 216 RYNSANIGATCTGYVDVKQGDEDALKEAVATIGPVSVAIDASHSSFQLYESGVYDEPECS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYG+D NG+DYWLVKNSW   WG++GYI M RN+
Sbjct: 276 SSELDHGVLAVGYGSD-NGHDYWLVKNSWGLGWGNKGYIMMTRNK 319


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/164 (56%), Positives = 103/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN G DTE+ YPYEA+                               D  C
Sbjct: 148 MDYAFKYIKDNDGDDTEACYPYEAV-------------------------------DGMC 176

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+KR   GA  RGY D+P G+E K+K AVA +GPVS+AIDASH SF  Y  GVY E EC+
Sbjct: 177 RFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSVAIDASHSSFMSYKGGVYVEKECS 236

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             QLDH VLVVGYGT E G DYWLVKNSW TTWGD+GYIKMARN
Sbjct: 237 PYQLDHGVLVVGYGT-EQGLDYWLVKNSWGTTWGDQGYIKMARN 279


>gi|225718114|gb|ACO14903.1| Cathepsin L precursor [Caligus clemensi]
          Length = 336

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/166 (52%), Positives = 104/166 (62%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI+DN GIDTE+SYPYE +                               D +C
Sbjct: 187 MDFAFTYIRDNKGIDTEASYPYEGI-------------------------------DGHC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     G  D G+VDI +G E  LK AVA +GP+S+AIDASH SFQFYS GVY E +C+
Sbjct: 216 HYNPKNKGGSDIGFVDIKKGSEKDLKKAVAGVGPISVAIDASHMSFQFYSHGVYVESKCS 275

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVG+GTD  +G DYWLVKNSW+  WGD+GYIKMARN+
Sbjct: 276 SEELDHGVLVVGFGTDSVSGEDYWLVKNSWSEKWGDQGYIKMARNK 321


>gi|405966500|gb|EKC31778.1| Cathepsin L [Crassostrea gigas]
          Length = 271

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPY A   F                               C
Sbjct: 124 MDNAFRYIESNKGIDTEESYPYTAKNGF-------------------------------C 152

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA D GYVDIP   E KL+ AVAT+GP+S+AIDA H+SFQ Y EGVY EP C+
Sbjct: 153 HFKKENVGATDTGYVDIPHMQEDKLQEAVATVGPISVAIDAGHKSFQLYREGVYSEPACS 212

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYGT E+G+DYWLVKNSW T+WG +GY+ MARN+
Sbjct: 213 SSKLDHGVLAVGYGT-ESGDDYWLVKNSWGTSWGMQGYVMMARNK 256


>gi|66377984|gb|AAY45869.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 113/233 (48%), Gaps = 83/233 (35%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 230 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 259

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE KLK AVAT GP S+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 260 LFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECS 319

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
              LDH VLVVGYGTD    DYW+VKNSW   WG++GYI+MARNR               
Sbjct: 320 PENLDHGVLVVGYGTDAQQGDYWIVKNSWGAHWGEQGYIRMARNR--------------- 364

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+AS AS+PLV
Sbjct: 365 --------------------------------------KNNCGIASHASYPLV 379


>gi|66394764|gb|AAY46196.1| cathepsin L-like cysteine proteinase [Globodera pallida]
          Length = 379

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 113/233 (48%), Gaps = 83/233 (35%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 230 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 259

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE KLK AVAT GP S+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 260 LFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECS 319

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
              LDH VLVVGYGTD    DYW+VKNSW   WG++GYI+MARNR               
Sbjct: 320 PENLDHGVLVVGYGTDAQQGDYWIVKNSWGAHWGEQGYIRMARNR--------------- 364

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                 +NNCG+AS AS+PLV
Sbjct: 365 --------------------------------------KNNCGIASHASYPLV 379


>gi|391338876|ref|XP_003743781.1| PREDICTED: cathepsin L-like isoform 4 [Metaseiulus occidentalis]
          Length = 336

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 99/164 (60%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+NHGIDTE SYPYE                                    C
Sbjct: 188 MDNAFTYIKENHGIDTEESYPYEGKQG-------------------------------KC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +  S   D G+VDIP G+E  L  A+ATIGPVS+AIDASH+SFQFY EGVY  P+C+
Sbjct: 217 RYHKEDSAGRDTGFVDIPSGNERALAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCD 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VL VGYGT ++G DY+++KNSW   WG EGY+ MARN
Sbjct: 277 SHSLDHGVLAVGYGTTDDGQDYYIIKNSWGERWGQEGYVLMARN 320


>gi|391338870|ref|XP_003743778.1| PREDICTED: cathepsin L-like isoform 1 [Metaseiulus occidentalis]
 gi|391338872|ref|XP_003743779.1| PREDICTED: cathepsin L-like isoform 2 [Metaseiulus occidentalis]
 gi|391338874|ref|XP_003743780.1| PREDICTED: cathepsin L-like isoform 3 [Metaseiulus occidentalis]
          Length = 331

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/164 (51%), Positives = 99/164 (60%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK+NHGIDTE SYPYE                                    C
Sbjct: 183 MDNAFTYIKENHGIDTEESYPYEGKQG-------------------------------KC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +  S   D G+VDIP G+E  L  A+ATIGPVS+AIDASH+SFQFY EGVY  P+C+
Sbjct: 212 RYHKEDSAGRDTGFVDIPSGNERALAKALATIGPVSVAIDASHESFQFYHEGVYNPPDCD 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VL VGYGT ++G DY+++KNSW   WG EGY+ MARN
Sbjct: 272 SHSLDHGVLAVGYGTTDDGQDYYIIKNSWGERWGQEGYVLMARN 315


>gi|332030000|gb|EGI69825.1| Cathepsin L [Acromyrmex echinatior]
          Length = 328

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 122/234 (52%), Gaps = 94/234 (40%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y++DN G+DTE SYPYEA                                +D C
Sbjct: 188 MDNAFKYVRDNKGLDTEKSYPYEAE-------------------------------NDKC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA+D G+VDIP G+E+KLKAAVATIGPVS+AIDASH+SFQ YSEGVY++PEC+
Sbjct: 217 RYNPRNSGAIDTGFVDIPRGNEHKLKAAVATIGPVSVAIDASHESFQLYSEGVYFDPECD 276

Query: 121 STQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDH 179
           S  LDH VL+VGYGTD + G+DYWL K S         YIKMARN+              
Sbjct: 277 SDNLDHGVLIVGYGTDSKTGHDYWLGKKS---------YIKMARNK-------------- 313

Query: 180 AVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                                  +N+CG+ASSAS+PLV
Sbjct: 314 ---------------------------------------DNHCGIASSASYPLV 328


>gi|345493482|ref|XP_001602523.2| PREDICTED: cathepsin L-like [Nasonia vitripennis]
          Length = 514

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 86/143 (60%), Positives = 97/143 (67%), Gaps = 31/143 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+DN G+DTES+YPYEA                                DD C
Sbjct: 191 MDNAFKYIRDNKGLDTESTYPYEAE-------------------------------DDEC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIPEGDE KLKAA+ATIGPVS+AIDASHQ+FQFYS GVYYEPEC+
Sbjct: 220 RYNARNSGAEDVGFVDIPEGDEEKLKAAIATIGPVSVAIDASHQTFQFYSTGVYYEPECS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYW 143
           ST+LDH VLVVGYGT E+G DYW
Sbjct: 280 STELDHGVLVVGYGTSEDGQDYW 302



 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/166 (50%), Positives = 101/166 (60%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF Y+K N G+D+E SYPYEA                                DD C
Sbjct: 364 MNNAFTYVKVNRGLDSEKSYPYEAE-------------------------------DDRC 392

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D GYV+IP G E KL+AAVAT+GP+S+AIDA   SF FY  GVYYEP+C+
Sbjct: 393 RYNPKNSAADDAGYVNIPTGSESKLQAAVATVGPISVAIDADSDSFMFYHSGVYYEPDCS 452

Query: 121 STQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL +GYGTD + G  +WLVKNSW   WG++GYI+M+RNR
Sbjct: 453 RTDLDHGVLAIGYGTDSKTGKQFWLVKNSWGEDWGEKGYIRMSRNR 498


>gi|229366214|gb|ACQ58087.1| Cathepsin L precursor [Anoplopoma fimbria]
          Length = 334

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 103/165 (62%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPYEA                                D  C
Sbjct: 187 MDSAFRYIQANGGIDTEDSYPYEAE-------------------------------DGQC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A  GA   GYVD+ +GDE  LK A+ATIGPVS+AIDASH SFQ Y  GVY EPEC+
Sbjct: 216 RYNSANIGATCTGYVDVKQGDEDALKEALATIGPVSVAIDASHSSFQLYESGVYDEPECS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYG+D NG+DYWLVKNSW   WG++GYI M RN+
Sbjct: 276 SSELDHGVLAVGYGSD-NGHDYWLVKNSWGLGWGNKGYIMMTRNK 319


>gi|197258082|gb|ACH56225.1| cathepsin L-like cysteine proteinase [Bursaphelenchus xylophilus]
          Length = 282

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 103/165 (62%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K NHGIDTE SYPY+A                                   C
Sbjct: 134 MDFAFEYVKQNHGIDTEESYPYKAKQK-------------------------------KC 162

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +++A  GA D G+VD+PE DE +LKAAVA+ GPVS+AIDA H+SF+ Y  GVYYE  C+
Sbjct: 163 HFQKANVGADDTGFVDLPEADEEQLKAAVASQGPVSVAIDAGHRSFRLYKTGVYYEKHCS 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             QLDH VLVVGYGTD    DYW+VKNSW   WG++GY+++ARNR
Sbjct: 223 PEQLDHGVLVVGYGTDPEHGDYWIVKNSWGEEWGEKGYVRIARNR 267


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 103/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK+N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKENDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|38146075|gb|AAR11477.1| cathepsin L [Litopenaeus vannamei]
          Length = 297

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 84/159 (52%), Positives = 98/159 (61%), Gaps = 31/159 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE SYPYEA                                D  C
Sbjct: 170 MDQAFRYIKANKGIDTEDSYPYEAQ-------------------------------DGKC 198

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA D GYVD+  G E  LK AVATIGP+S+ IDAS  +F FY  GVY++  C+
Sbjct: 199 RFDASNVGATDTGYVDVEHGSESALKKAVATIGPISVGIDASQSTFHFYHTGVYHDDHCS 258

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYI 159
           ST LDH VL VGYG+DENG D+WLVKNSWNT+WGD+GYI
Sbjct: 259 STMLDHGVLAVGYGSDENGGDFWLVKNSWNTSWGDKGYI 297


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 105/164 (64%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N GIDTE SYPY A                                D  C
Sbjct: 184 MDNAFQYIKENGGIDTEKSYPYLAK-------------------------------DGVC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y ++  GA D G+VDIP GDE  L+ A+A++GP+SIAIDAS  +F FY +GVY +P+C+
Sbjct: 213 HYNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVYDDPDCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VL VGYGTD+ G DYWLVKNSW  +WG+EGYIK+ARN
Sbjct: 273 STRLDHGVLAVGYGTDD-GKDYWLVKNSWGPSWGEEGYIKIARN 315


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|391328503|ref|XP_003738728.1| PREDICTED: digestive cysteine proteinase 3-like [Metaseiulus
           occidentalis]
          Length = 506

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQ F YIK+N GIDTE SYPY A                                D +C
Sbjct: 359 MDQGFTYIKNNGGIDTEESYPYNAE-------------------------------DGDC 387

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA   G+VDI  G E  L+ AVAT+GPVS+AIDAS+ SFQ Y EG+Y EP C+
Sbjct: 388 AFKSNAVGARVTGFVDIDSGSEKALQKAVATVGPVSVAIDASNDSFQLYKEGIYDEPACS 447

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VGYG+ ENG DYWLVKNSWNT WG +GYIKMARN+
Sbjct: 448 STQLDHGVLAVGYGS-ENGVDYWLVKNSWNTVWGQDGYIKMARNK 491



 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 81/144 (56%), Gaps = 32/144 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AF+YIK N GIDTE SYPY                               T     C
Sbjct: 187 MDKAFEYIKKNGGIDTEESYPY-------------------------------TGRKGKC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA   G+VD+P  DE  LK AVA IGP+S+ IDAS  SF+FY EG+Y E  C+
Sbjct: 216 MFKKKNIGARVTGHVDVPAEDEQALKLAVAKIGPISVGIDASKDSFRFYKEGIYDESSCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWL 144
           ++QLDH VLVVGYG+ E G DYWL
Sbjct: 276 TSQLDHGVLVVGYGS-EKGKDYWL 298


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  169 bits (428), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|390347681|ref|XP_801784.2| PREDICTED: cathepsin L1-like isoform 2 [Strongylocentrotus
           purpuratus]
          Length = 336

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQ FQY+ DNHGID+E  YPY+A                                D+ C
Sbjct: 189 MDQGFQYVIDNHGIDSEDCYPYDAE-------------------------------DETC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK +   A   G+ D+  GDE  L  AVA++GPVS+AIDASHQSFQ Y  GVY EPEC+
Sbjct: 218 HYKASCDSAEVTGFTDVTSGDEQALMEAVASVGPVSVAIDASHQSFQLYESGVYDEPECS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VLVVGYGTD  G DYWLVKNSW  TWG  GYIKM+RN+
Sbjct: 278 SSELDHGVLVVGYGTD-GGKDYWLVKNSWGETWGLSGYIKMSRNK 321


>gi|399764976|gb|AFP50672.1| cathepsin L-like protease, partial [Earias vitella]
          Length = 222

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 99/148 (66%), Gaps = 31/148 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDNHG+DTE SYPYEA+                               DD C
Sbjct: 106 MDNAFKYIKDNHGLDTEKSYPYEAV-------------------------------DDKC 134

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R     SGA D G+VDIP GDE KLKAAVAT+GPVS+AIDAS QSFQFYS+GVY E +C+
Sbjct: 135 RCNPKNSGADDVGFVDIPSGDEDKLKAAVATVGPVSVAIDASQQSFQFYSDGVYDEDQCS 194

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNS 148
           ST+LDH VLVVGYGT E+G DYWLVKNS
Sbjct: 195 STELDHGVLVVGYGTSEDGQDYWLVKNS 222


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  FQYIK N GIDTE S+PY                               T+ D +C
Sbjct: 186 MDNGFQYIKANGGIDTEESHPY-------------------------------TAQDGDC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++K+A  GA D G+VDI +G E  LK AVAT+GPVS+AIDASH SFQ YS+GVY EP+C+
Sbjct: 215 KFKKADVGATDAGFVDIQQGSEDDLKKAVATVGPVSVAIDASHGSFQLYSQGVYDEPDCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+QLDH VL VGYG  +NG  YWLVKNSW   WGD GYI M+R++
Sbjct: 275 SSQLDHGVLTVGYGV-KNGKKYWLVKNSWGGDWGDNGYILMSRDK 318


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPY+A+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYKAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +F YIK N GIDTE SYPYEA                                D +C
Sbjct: 186 MDNSFNYIKANGGIDTEDSYPYEAE-------------------------------DGDC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK+   GA D G+VDI EG E  L+ AVAT+GPVS+AIDAS QSFQ YSEGVY EP C+
Sbjct: 215 RYKKEDVGATDTGFVDIKEGSEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG  +NG  YWLVKNSW  TWG +GYI M+R++
Sbjct: 275 SESLDHGVLAVGYGV-KNGKKYWLVKNSWAETWGQDGYILMSRDK 318


>gi|55740404|gb|AAV63978.1| cathepsin L2 precursor [Artemia franciscana]
          Length = 226

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/167 (53%), Positives = 107/167 (64%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + QAF+YIKDN GIDTE+ Y YEA  +F                               C
Sbjct: 77  ISQAFEYIKDNKGIDTENKYHYEAKENF-------------------------------C 105

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R      GAV  G+V+IP G+E KLKAAVAT+GPVS  ID SH+ FQFYS+GVYYEP C 
Sbjct: 106 RDNPRNRGAVALGFVNIPSGEEDKLKAAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCK 165

Query: 121 ST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++   L+HAVLV+GYG+D NG DYWLVKNSW+  WGDEGY+K+ARNR
Sbjct: 166 TSFEHLNHAVLVIGYGSD-NGEDYWLVKNSWSKHWGDEGYLKIARNR 211


>gi|290462225|gb|ADD24160.1| Cathepsin L [Lepeophtheirus salmonis]
          Length = 334

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 104/166 (62%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+DN+GIDTE+SYPYE +                               D +C
Sbjct: 185 MDYAFKYIQDNNGIDTEASYPYEGI-------------------------------DGHC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     G  D G+VDI +G E  L+ A+AT+GP+S+AIDASH SFQFYS GVY E +C+
Sbjct: 214 HYDPKNKGGSDIGFVDIKKGSEKDLQKALATVGPISVAIDASHMSFQFYSHGVYSEKKCS 273

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VL VGYGTDE  G DYWLVKNSW+  WG++GYIKMARN+
Sbjct: 274 PENLDHGVLAVGYGTDEVTGEDYWLVKNSWSEKWGEDGYIKMARNK 319


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 105/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI  N GI+TE  YPY+A                                 + C
Sbjct: 200 MDQAFEYIITNGGIETEEEYPYDAR-------------------------------QERC 228

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+++  A   G VD+  GDE  LK +VA +GPVSIAIDASHQSFQ YS GVY EP+C+
Sbjct: 229 HFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSFQLYSGGVYDEPKCS 288

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGYGTD +G DYWLVKNSW TTWG EGY+KM+RN+
Sbjct: 289 STELDHGVLVVGYGTD-DGQDYWLVKNSWGTTWGLEGYVKMSRNQ 332


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 106/165 (64%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
            +QAFQYIKDN GI+TE SYPYEA                                D +C
Sbjct: 495 FEQAFQYIKDNGGINTEDSYPYEAF-------------------------------DGSC 523

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++    GA   GY  IP+G E  L+ AV+TIGP+S+AID S+ SFQ Y EGVYYEP C+
Sbjct: 524 RFREDSIGATVSGYQTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCS 583

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDHAVLVVGYG+D  G DYWLVKNSW T++G++GY++MARN+
Sbjct: 584 SSNLDHAVLVVGYGSD-GGEDYWLVKNSWGTSFGEQGYVRMARNK 627



 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/163 (48%), Positives = 98/163 (60%), Gaps = 33/163 (20%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +AF Y+K++ GID E SYPYEA                              SG   CR+
Sbjct: 177 EAFDYLKNSGGIDAEESYPYEA------------------------------SG-GTCRF 205

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
           ++    A   GY  I  G+E +L+ AVATIGP+S+ ID+ H  FQ Y+ G+YYEPEC + 
Sbjct: 206 RQDSVAATVSGYQAISAGNEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEPEC-TE 264

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            L HAVLVVGYGT ENG DYWLVKNSW  ++G +GYIKMARNR
Sbjct: 265 HLSHAVLVVGYGT-ENGEDYWLVKNSWGASYGLQGYIKMARNR 306


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 103/165 (62%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIKDN GIDTE+SYPYEA                                D  C
Sbjct: 177 MDFAFTYIKDNGGIDTEASYPYEAT-------------------------------DGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A SGA   GYVD+    E  L+ AVATIGP+S+AIDAS  +F FY +GVYY+ EC+
Sbjct: 206 QYNPANSGATVTGYVDVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKGVYYDKECS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT ++G DYWLVKNSWN TWG+ G+I+M+RNR
Sbjct: 266 STSLDHGVLAVGYGT-QDGTDYWLVKNSWNITWGNHGFIEMSRNR 309


>gi|159792912|gb|ABW98676.1| cathepsin L [Apostichopus japonicus]
          Length = 332

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 98/165 (59%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTE  YPYEA                                DD C
Sbjct: 184 MDYAFQYIKDNLGIDTEDKYPYEAE-------------------------------DDTC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA D GYVD+  GDE  LK A A  GP+S+AIDASH+SFQ Y  GVY E  C+
Sbjct: 213 RFSPDNVGATDSGYVDVDSGDEDALKEACAANGPISVAIDASHESFQLYESGVYDEESCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGTD  G DYW+VKNSW  +WG EGYI M+RN+
Sbjct: 273 SIELDHGVLVVGYGTDSVGGDYWIVKNSWGLSWGQEGYIWMSRNK 317


>gi|82796372|gb|ABB91778.1| cathepsin L [Hymeniacidon perlevis]
          Length = 323

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE+SYPY+A                                D+ C
Sbjct: 176 MDQAFEYIKKNGGIDTEASYPYQAH-------------------------------DERC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K +  GA   GYVDI   DE  L  AV  IGPVS+AIDASH SFQ Y  GVYYE EC+
Sbjct: 205 RFKASDVGATCTGYVDIKREDENALMQAVEKIGPVSVAIDASHSSFQLYRSGVYYERECS 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL +GYGT E G+DYWLVKNSW T WG EGYI M+RNR
Sbjct: 265 QTALDHGVLAIGYGT-EGGSDYWLVKNSWGTDWGMEGYIMMSRNR 308


>gi|23306947|dbj|BAC16538.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/168 (51%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE +YPY                              + + D +C
Sbjct: 184 MDQAFQYIKDNGGLDTEDAYPY------------------------------LGTDDQDC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A D G+VDIPEG E  L  AVA +GPVS+AIDA H+SFQFY  G+Y+E EC+
Sbjct: 214 HYDPKYSAANDTGFVDIPEGKERALMKAVAAVGPVSVAIDAGHESFQFYHSGIYFEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGY   G D +G  YW+VKNSW+  WGDEGYI MA++R
Sbjct: 274 STELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDR 321


>gi|405966499|gb|EKC31777.1| Cathepsin L [Crassostrea gigas]
          Length = 331

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPY A   F                               C
Sbjct: 184 MDNAFRYIESNKGIDTEESYPYTAKNGF-------------------------------C 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA D GYVDIP   E KL+ AVAT+GP+S+ IDA H+SFQ Y EGVY EP C+
Sbjct: 213 HFKAENVGATDTGYVDIPHMQEDKLQEAVATVGPISVGIDAGHKSFQLYREGVYSEPACS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYGT E+G+DYWLVKNSW T+WG +GY+ MARN+
Sbjct: 273 SSKLDHGVLAVGYGT-ESGDDYWLVKNSWGTSWGMQGYVMMARNK 316


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/164 (53%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK N GIDTE SYPYEA+                               D  C
Sbjct: 185 MEDAFKYIKANDGIDTEKSYPYEAV-------------------------------DGEC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D GYV+I  G E  LK AVAT+GP+S+AIDASH SFQ YSEGVY EPEC+
Sbjct: 214 RFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGVYDEPECS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R+
Sbjct: 274 SEDLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRD 316


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++DN GID+E SYPY A                                D++C
Sbjct: 201 MDQAFQYVQDNGGIDSEESYPYTA------------------------------KDDEDC 230

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK   + A D G+VDIP+G E  L  AVA++GPVS+AIDA H SFQFY  G+YYEP+C+
Sbjct: 231 RYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCS 290

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D +G  YW+VKNSW   WGD+GYI MA++R
Sbjct: 291 SEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDR 338


>gi|443722452|gb|ELU11310.1| hypothetical protein CAPTEDRAFT_132308 [Capitella teleta]
          Length = 235

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 101/164 (61%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N GID+E SYPYEA+                               D  C
Sbjct: 87  MDNAFTYIKKNMGIDSEKSYPYEAV-------------------------------DGEC 115

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK++ S   D G+VDIP GDE  L+ AVA++GPVS+AIDASH SFQFY  GVY E  C+
Sbjct: 116 RYKKSDSVTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTSFQFYKTGVYTEANCS 175

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           STQLDH VLVV     ENG DYWLVKNSW  +WG+ GYIKMARN
Sbjct: 176 STQLDHGVLVVVGYGVENGQDYWLVKNSWGASWGEAGYIKMARN 219


>gi|226443040|ref|NP_001140018.1| Cathepsin L1 precursor [Salmo salar]
 gi|221221188|gb|ACM09255.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 105/168 (62%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+DTE SYPY                              V + +D C
Sbjct: 186 MDQAFQYIQDNAGLDTEESYPY------------------------------VGTDEDPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA + G+VDIP G E+ +  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 216 HYKPEFSGANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECS 275

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 276 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 323


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+   GIDTE SYPYEA                                D  C
Sbjct: 187 MDDAFRYIQATGGIDTEESYPYEAE-------------------------------DGEC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK    GA   GYVD+  GDE  L+ AVATIGP+S+ IDASH SFQ Y  G+Y EP+C+
Sbjct: 216 RYKPDAVGATCTGYVDVSSGDEDALQEAVATIGPISVGIDASHISFQLYESGLYDEPQCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYG+ ENG DYWLVKNSW  TWGD+GYIKM++N+
Sbjct: 276 SSELDHGVLAVGYGS-ENGQDYWLVKNSWGLTWGDQGYIKMSKNK 319


>gi|21617827|sp|P09648.1|CATL1_CHICK RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain
          Length = 218

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 103/165 (62%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++DN GID+E SYPY A                                D++C
Sbjct: 70  MDQAFQYVQDNGGIDSEESYPYTA------------------------------KDDEDC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK   + A D G+VDIP+G E  L  AVA++GPVS+AIDA H SFQFY  G+YYEP+C+
Sbjct: 100 RYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCS 159

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG  E G  YW+VKNSW   WGD+GYI MA++R
Sbjct: 160 SEDLDHGVLVVGYGF-EGGKKYWIVKNSWGEKWGDKGYIYMAKDR 203


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI+ N GIDTE SYPYEA                                +  C
Sbjct: 187 MDYAFQYIQANGGIDTEESYPYEAE-------------------------------NGKC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY     GA   GY ++ +GDE  LK AVATIGP+S+ IDAS  SFQFY  GVY EP+C+
Sbjct: 216 RYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGVYNEPDCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGYGT E+GNDYWLVKNSW   WGD+GYIKM+RN+
Sbjct: 276 SLELDHGVLAVGYGT-EDGNDYWLVKNSWGLEWGDKGYIKMSRNK 319


>gi|398258447|gb|AFO72231.1| cathepsin L-like protease, partial [Leucinodes orbonalis]
          Length = 207

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 98/148 (66%), Gaps = 31/148 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+DNHGIDTE +YPYEA+                               DD C
Sbjct: 90  MDNAFKYIRDNHGIDTEKTYPYEAV-------------------------------DDKC 118

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VD+P GDE KLK AVAT+GPV++AIDAS +SFQFYS GVYY+  C+
Sbjct: 119 RYNSKNSGADDVGFVDVPAGDEDKLKEAVATVGPVAVAIDASQESFQFYSTGVYYDENCS 178

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNS 148
           S+ LDH VLVVGYGTDE+G DYWLVKNS
Sbjct: 179 SSNLDHGVLVVGYGTDEDGGDYWLVKNS 206


>gi|348542776|ref|XP_003458860.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/165 (55%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE+SYPYEA                                D  C
Sbjct: 187 MDSAFRYIEANGGIDTEASYPYEAE-------------------------------DWLC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A  GA   GYVD+ + DE  LK AVATIGPVS+AIDASH SFQFY+ GVY EP C+
Sbjct: 216 RYNPASVGATCSGYVDVNKYDEEALKEAVATIGPVSVAIDASHASFQFYTSGVYDEPGCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGYGT ENG+DYWLVKNSW   WG+ GYIKM+RN+
Sbjct: 276 SIELDHGVLAVGYGT-ENGHDYWLVKNSWGRGWGEMGYIKMSRNK 319


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++DN GID+E SYPY A                                D++C
Sbjct: 291 MDQAFQYVQDNGGIDSEESYPYTA------------------------------KDDEDC 320

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK   + A D G+VDIP+G E  L  AVA +GPVS+AIDA H SFQFY  G+YYEP+C+
Sbjct: 321 RYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDCS 380

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D +G  YW+VKNSW   WGD+GYI MA++R
Sbjct: 381 SEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDR 428


>gi|223646726|gb|ACN10121.1| Cathepsin L1 precursor [Salmo salar]
 gi|223672581|gb|ACN12472.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 105/168 (62%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+DTE SYPY                              V + +D C
Sbjct: 186 MDQAFQYIQDNAGLDTEESYPY------------------------------VGTDEDPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA + G+VDIP G E+ +  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 216 HYKPEFSGANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYEFGIYYEKECS 275

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 276 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 323


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 101/165 (61%), Gaps = 30/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI+DN G+DTE+SYPY+A                                   C
Sbjct: 234 MDNAFQYIEDNKGVDTENSYPYKA------------------------------KNGKKC 263

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR+  GA D GYVD+P GDE KLK AVAT GP+S+AIDA H+SFQ Y+ GVY E  C+
Sbjct: 264 LFKRSNVGATDTGYVDLPSGDEDKLKIAVATQGPISVAIDAGHRSFQLYAHGVYDEEACS 323

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L H VLVVGYGTD+   DYWLVKNSW   WG+ GYI+M+RN+
Sbjct: 324 PDNLGHGVLVVGYGTDDIHGDYWLVKNSWGEHWGENGYIRMSRNK 368


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++DN GID+E SYPY A                                D++C
Sbjct: 167 MDQAFQYVQDNGGIDSEESYPYTA------------------------------KDDEDC 196

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK   + A D G+VDIP+G E  L  AVA +GPVS+AIDA H SFQFY  G+YYEP+C+
Sbjct: 197 RYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDCS 256

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D +G  YW+VKNSW   WGD+GYI MA++R
Sbjct: 257 SEDLDHGVLVVGYGFEGEDVDGKKYWIVKNSWGEKWGDKGYIYMAKDR 304


>gi|156371477|ref|XP_001628790.1| predicted protein [Nematostella vectensis]
 gi|156215775|gb|EDO36727.1| predicted protein [Nematostella vectensis]
          Length = 330

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+N GIDTE SYPYEA                                +D C
Sbjct: 183 MDYAFKYIKENGGIDTEESYPYEAR-------------------------------NDRC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++++  GAVD G+VD+  GDE  LK A  T+GP+S+AIDA H SFQFY  GVY    C+
Sbjct: 212 RFQKSNIGAVDTGFVDVTHGDEEALKTAAGTVGPISVAIDAGHMSFQFYHSGVYNNAGCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYGT + G+DYWLVKNSW   WG EGYI M+RN+
Sbjct: 272 STSLDHGVLVVGYGTYQ-GSDYWLVKNSWGERWGMEGYIMMSRNK 315


>gi|50539796|ref|NP_001002368.1| cathepsin L.1 precursor [Danio rerio]
 gi|49900360|gb|AAH75887.1| Cathepsin L.1 [Danio rerio]
          Length = 334

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+ N G+DTE SYPYEA                                D  C
Sbjct: 187 MDQAFQYIEANKGLDTEDSYPYEAQ-------------------------------DGEC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +  GA   GYVDI  GDE  L+ AVATIGP+S+AIDA H SFQ YS GVY EP+C+
Sbjct: 216 RFNPSTVGASCTGYVDIASGDESALQEAVATIGPISVAIDAGHSSFQLYSSGVYNEPDCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VGYG+  NG+DYW+VKNSW   WG +GYI M+RN+
Sbjct: 276 SSELDHGVLAVGYGS-SNGDDYWIVKNSWGLDWGVQGYILMSRNK 319


>gi|348531523|ref|XP_003453258.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 341

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI+ N GIDTE SYPYEA                                D  C
Sbjct: 194 MDSAFQYIQANGGIDTEESYPYEAE-------------------------------DGKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA   GYVD+   +E  LK AVATIGP+S+AIDA H SFQFY  GVY EP+C+
Sbjct: 223 RYNPKSTGATCTGYVDVQPANEETLKEAVATIGPISVAIDAFHPSFQFYESGVYDEPDCS 282

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDHAVL VGYGT ENG DYWLVKNS    WG++GYIKM+RN+
Sbjct: 283 STMLDHAVLAVGYGT-ENGLDYWLVKNSAGVGWGEKGYIKMSRNK 326


>gi|318816588|ref|NP_001187996.1| cathepsin L precursor [Ictalurus punctatus]
 gi|308324547|gb|ADO29408.1| cathepsin L [Ictalurus punctatus]
          Length = 334

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+DN GIDTE SYPYEA                                D +C
Sbjct: 187 MDLAFEYIEDNKGIDTEESYPYEAT-------------------------------DGDC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K A  GA   GYVDI   DE  L+ AVA IGP+S+AIDA H SFQ Y  G+Y EP C+
Sbjct: 216 RFKPATVGATCTGYVDINSEDENALQKAVANIGPISVAIDAGHISFQLYGSGIYNEPNCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGTD N  DYWLVKNSW   WGD+GYIKM RN+
Sbjct: 276 SEDLDHGVLAVGYGTD-NQQDYWLVKNSWGLDWGDQGYIKMTRNK 319



 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 3/81 (3%)

Query: 155 DEGYI--KMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYI 212
           D G+I  ++  + +Y EP C+S  LDH VL VGYGTD N  DYWLVKNSW   WGD+GYI
Sbjct: 255 DAGHISFQLYGSGIYNEPNCSSEDLDHGVLAVGYGTD-NQQDYWLVKNSWGLDWGDQGYI 313

Query: 213 KMARNRENNCGVASSASFPLV 233
           KM RN+ N CG+A++AS+PLV
Sbjct: 314 KMTRNKNNQCGIATAASYPLV 334


>gi|291224870|ref|XP_002732425.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 326

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 86/165 (52%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YIKD  G ++E  YPY                               T  DD C
Sbjct: 179 MDQAFSYIKDK-GEESEDGYPY-------------------------------TGTDDTC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +K  A D GY DIPE DE  L+ AVAT+GP+S+AIDA+H SFQFY  GVY EPEC+
Sbjct: 207 VYDASKVVATDTGYTDIPEMDENALQQAVATVGPISVAIDATHSSFQFYESGVYDEPECS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDHAVL VGYGT E G DYW+VKNSW+T WG +GYI+M+RN+
Sbjct: 267 QTNLDHAVLAVGYGTSEEGLDYWIVKNSWSTGWGMQGYIEMSRNK 311


>gi|34850847|dbj|BAC87861.1| cathepsin L [Engraulis japonicus]
          Length = 336

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE +YPY                              + + D +C
Sbjct: 184 MDQAFQYIKDNGGLDTEDAYPY------------------------------LGTDDQDC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A D G+VDIPEG E  L  AVA +GPVS+AIDA H+ FQFY  G+Y+E EC+
Sbjct: 214 HYDPKYSAANDTGFVDIPEGKERALMKAVAAVGPVSVAIDAGHECFQFYHSGIYFEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGY   G D +G  YW+VKNSW+  WGDEGYI MA++R
Sbjct: 274 STELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDEGYIYMAKDR 321


>gi|28932704|gb|AAO60046.1| midgut cysteine proteinase 3 [Rhipicephalus appendiculatus]
          Length = 334

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 103/233 (44%), Positives = 118/233 (50%), Gaps = 86/233 (36%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE SYPY A                                D  C
Sbjct: 188 MDNAFKYIKANKGIDTELSYPYNAT-------------------------------DGVC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++  GA   G+ DIP  DE    A VA +GPVS+AIDASH+SFQFYSEGV       
Sbjct: 217 HFKKSGVGATATGFEDIPARDENSWDA-VAPVGPVSVAIDASHESFQFYSEGV------- 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHA 180
              LD                                           EPEC+S QLDH 
Sbjct: 269 ---LD-------------------------------------------EPECSSDQLDHG 282

Query: 181 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           VLVVGYGT ++G DYWLVKNSW TTWGDEGYI M RN++N CG+ASSAS+PLV
Sbjct: 283 VLVVGYGT-KDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYPLV 334


>gi|45550334|gb|AAS67923.1| cathepsin L [Artemia franciscana]
          Length = 226

 Score =  166 bits (419), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 106/167 (63%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + QAF+YIKDN GIDTE+ Y YEA  +F                               C
Sbjct: 77  ISQAFEYIKDNKGIDTENKYHYEAKENF-------------------------------C 105

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R      GAV  G+V+IP G+E KLKAAVAT+GPVS  ID SH+ FQFYS+GVYYEP C 
Sbjct: 106 RDNPRNRGAVALGFVNIPSGEEDKLKAAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCK 165

Query: 121 ST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++   L+HAVLV+G G+D NG DYWLVKNSW+  WGDEGY+K+ARNR
Sbjct: 166 TSFEHLNHAVLVIGCGSD-NGEDYWLVKNSWSKHWGDEGYLKIARNR 211


>gi|47230018|emb|CAG10432.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 294

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI++N GIDTE SYPYEA                                D  C
Sbjct: 147 MDSAFKYIQENGGIDTEESYPYEAE-------------------------------DGKC 175

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K    GA   GYVD+  GDE  LK AVATIGPVS+AIDASH SFQ Y  GVY E EC+
Sbjct: 176 RFKPQNIGAKCTGYVDVTAGDEDALKEAVATIGPVSVAIDASHSSFQLYESGVYDELECS 235

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGTD NG DYWLVKNSW   WG +GYI M+RN+
Sbjct: 236 SEDLDHGVLAVGYGTD-NGQDYWLVKNSWGLGWGQKGYIMMSRNK 279


>gi|1698586|gb|AAB37252.1| cathepsin L, partial [Oncorhynchus mykiss]
          Length = 196

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+DTE SYPY                              V + +D C
Sbjct: 44  MDQAFQYIQDNAGLDTEESYPY------------------------------VGTDEDPC 73

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A + G+VDIP G E+ +  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 74  HYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECS 133

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 134 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 181


>gi|185135439|ref|NP_001117777.1| procathepsin L precursor [Oncorhynchus mykiss]
 gi|14582899|gb|AAK69706.1|AF358668_1 procathepsin L [Oncorhynchus mykiss]
          Length = 338

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+DTE SYPY                              V + +D C
Sbjct: 186 MDQAFQYIQDNAGLDTEESYPY------------------------------VGTDEDPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A + G+VDIP G E+ +  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 216 HYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECS 275

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 276 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 323


>gi|225719768|gb|ACO15730.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 338

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+DTE SYPY                              V + +D C
Sbjct: 186 MDQAFQYIQDNAGLDTEESYPY------------------------------VGTDEDPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A + G+VDIP G E+ +  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 216 HYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAIDAGHESFQFYESGIYYEKECS 275

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 276 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 323


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/172 (50%), Positives = 105/172 (61%), Gaps = 35/172 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F YI+ N GIDTE SYPY                               T  D +C
Sbjct: 176 MDNGFTYIQQNGGIDTEESYPY-------------------------------TGKDGDC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +     GA  +G+VD+P+ DE  L+AAVA++GPVS+AIDAS+ SFQ+Y EGVY EP C+
Sbjct: 205 AFNENSVGARVKGFVDVPQRDEAALQAAVASVGPVSVAIDASNDSFQYYKEGVYDEPSCS 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            +QLDH VLVVGYGT ENG DYWLVKNSW  TWG +GYIKM RN+   E +C
Sbjct: 265 FSQLDHGVLVVGYGT-ENGVDYWLVKNSWGPTWGQDGYIKMMRNK---ENQC 312


>gi|405966498|gb|EKC31776.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN GIDTESSYPYEA                                +  C
Sbjct: 183 MDDAFQYIKDNSGIDTESSYPYEAK-------------------------------NGKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  A  GA D G+ DI    E  L++AVAT+GP+S+AIDASH SFQ Y  GVY+E  C+
Sbjct: 212 RFNAANVGATDSGFTDIKSKSESDLQSAVATVGPISVAIDASHMSFQLYRSGVYHEFFCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYGT E+G DYWLVKNSW  +WG +GYI M+RN+
Sbjct: 272 ETRLDHGVLAVGYGT-ESGKDYWLVKNSWGESWGQKGYIMMSRNK 315


>gi|118119|sp|P13277.2|CYSP1_HOMAM RecName: Full=Digestive cysteine proteinase 1; Flags: Precursor
 gi|11051|emb|CAA45127.1| cysteine proteinase preproenzyme [Homarus americanus]
 gi|228243|prf||1801240A Cys protease 1
          Length = 322

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +++A  Y++DN G+DTESSYPYEA                                D+ C
Sbjct: 175 VERAIMYVRDNGGVDTESSYPYEAR-------------------------------DNTC 203

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA   GYV I +G E  LK A   IGP+S+AIDASH+SFQ Y  GVYYEP C+
Sbjct: 204 RFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCS 263

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+QLDHAVL VGYG+ E G D+WLVKNSW T+WG+ GYIKMARNR
Sbjct: 264 SSQLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGESGYIKMARNR 307


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+GIDTESSYPYEA                                +  C
Sbjct: 183 MDDAFQYIKDNNGIDTESSYPYEAK-------------------------------NGKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  A  GA D G+ DI    E  L++AVAT+GP+++AIDASH SFQ Y  GVY+E  C+
Sbjct: 212 RFNAANVGATDSGFTDIKSKSESDLQSAVATVGPIAVAIDASHMSFQLYKSGVYHEFFCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYGT E+G DYWLVKNSW  +WG +GYI M+RN+
Sbjct: 272 ETRLDHGVLAVGYGT-ESGKDYWLVKNSWGESWGQKGYIMMSRNK 315


>gi|395514298|ref|XP_003761356.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 365

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N GIDTE SYPY A                                DD C
Sbjct: 217 MDNAFEYVKENGGIDTEESYPYIA-------------------------------ADDTC 245

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   SGA   GYVDIP   E  L+ AVAT+GP+S+AIDA H SFQFY  GVYYEPEC+
Sbjct: 246 QYKPQYSGANITGYVDIPSRMEKALEKAVATVGPISVAIDAGHSSFQFYRSGVYYEPECS 305

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG       YW+VKNSW   WGD GYI MAR+R
Sbjct: 306 SEDLDHGVLAVGYGVQGKNGKYWIVKNSWGEEWGDSGYILMARDR 350


>gi|327263389|ref|XP_003216502.1| PREDICTED: cathepsin L1-like [Anolis carolinensis]
          Length = 339

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/169 (48%), Positives = 104/169 (61%), Gaps = 34/169 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YI DN GID+E SYPY                              +   D++C
Sbjct: 186 MDQAFEYIADNGGIDSEESYPY------------------------------IAKDDEDC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   + A D G+VD+PEG E  L  AVA +GPVS+AIDASH +FQFY  G+YY+P+C+
Sbjct: 216 LYKSEFNAANDTGFVDVPEGHERALMKAVAAVGPVSVAIDASHSTFQFYESGIYYDPDCS 275

Query: 121 STQLDHAVLVVGYG----TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYG     D+N   YW+VKNSW+  WGD+GYI MA++R
Sbjct: 276 SEELDHGVLVVGYGFEGTDDDNKKKYWIVKNSWSDKWGDKGYILMAKDR 324


>gi|45550332|gb|AAS67922.1| cathepsin L [Artemia franciscana]
          Length = 226

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 105/167 (62%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + QAF+YIKDN GIDTE+ Y YEA  +F                               C
Sbjct: 77  ISQAFEYIKDNKGIDTENKYHYEAKENF-------------------------------C 105

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R      GAV  G+V+IP G+E KLKAAVAT+GPVS  ID SH+ FQFYS+GVYYEP C 
Sbjct: 106 RDNPRNRGAVALGFVNIPSGEEDKLKAAVATVGPVSAVIDVSHEGFQFYSKGVYYEPSCK 165

Query: 121 ST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++   L+H VLV+G G+D NG DYWLVKNSW+  WGDEGY+K+ARNR
Sbjct: 166 TSFEHLNHEVLVIGCGSD-NGEDYWLVKNSWSKHWGDEGYLKIARNR 211


>gi|388509526|gb|AFK42829.1| unknown [Lotus japonicus]
          Length = 333

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 104/165 (63%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YIK+N+GIDTESSYPY+A+                               D+ C
Sbjct: 186 MDQAFTYIKENNGIDTESSYPYKAV-------------------------------DEKC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K A  GA D GY DI + DE  L++A+AT+GP+S+AIDASH SFQ Y  G Y E  C+
Sbjct: 215 HFKAADVGATDTGYTDIAQQDENALQSAIATVGPISVAIDASHSSFQLYRSGAYNERACS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +TQLDH VL VGY + E+G DY++VKNSW T+WG +GYI M RN+
Sbjct: 275 ATQLDHGVLAVGYDS-EDGKDYYIVKNSWGTSWGQKGYIWMTRNK 318


>gi|410898132|ref|XP_003962552.1| PREDICTED: cathepsin L-like [Takifugu rubripes]
          Length = 335

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI++N GIDTE SYPYEA                                D  C
Sbjct: 188 MDYAFKYIQENGGIDTEKSYPYEAE-------------------------------DGQC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K    GA   GYVD+  GDE  LK AVATIGPVS+ IDASH SFQ Y  GVY E +C+
Sbjct: 217 RFKPENVGAKCTGYVDVTVGDEDALKEAVATIGPVSVGIDASHSSFQLYDSGVYDEQDCS 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGTD NG DYWLVKNSW   WG EGYI M+RN+
Sbjct: 277 SQDLDHGVLAVGYGTD-NGQDYWLVKNSWGLGWGQEGYIMMSRNK 320


>gi|291383517|ref|XP_002708299.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 85/168 (50%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPYE M                               D  C
Sbjct: 183 MDYAFQYVKDNSGLDSEESYPYEGM-------------------------------DGTC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDIP G E  L  AVAT+GP+S AIDA H SFQFY  G+YY+P+C+
Sbjct: 212 KYKPECSVANDTGFVDIP-GHEKALLRAVATVGPISAAIDAGHMSFQFYKSGIYYDPDCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH +LVVGY   GT+ N   YWLVKNSW TTWGDEGY+K+ R++
Sbjct: 271 SKDLDHGILVVGYGFEGTNSNATKYWLVKNSWGTTWGDEGYVKIIRDK 318


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YIK N GIDTE+SYPYEA                                   C
Sbjct: 179 MDQAFTYIKVNDGIDTETSYPYEA-------------------------------ASGKC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+ +A  GA D GY DI    E  L++AVAT+GP+++AIDASH SFQ Y  GVY+   C+
Sbjct: 208 RFNKANVGANDTGYTDIKSKSESDLQSAVATVGPIAVAIDASHMSFQLYKSGVYHYIFCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYGTD +G DYWLVKNSW  TWG +GYI M+RNR
Sbjct: 268 QTRLDHGVLAVGYGTD-SGKDYWLVKNSWGATWGQQGYIMMSRNR 311


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/167 (49%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 185 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GP+S+AIDA H+SFQFYS GVY EP+C+
Sbjct: 215 KFDNSSVGATLIGYKDVKSGNEHALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQCS 274

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYG   D +   +W+VKNSW   WGD+GYI M+RN+
Sbjct: 275 SEQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNK 321


>gi|349803983|gb|AEQ17464.1| putative cathepsin l [Hymenochirus curtipes]
          Length = 173

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN GID+E SYPY A                                D  C
Sbjct: 24  MDQAFQYIKDNGGIDSEESYPYTA------------------------------KDDQEC 53

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A D G+VD+P G+E +L  AVA++GPVS+A+DA HQSFQFY+ G+YYEP C+
Sbjct: 54  HYDPANKAANDTGFVDVPSGNERELMKAVASVGPVSVAVDAGHQSFQFYTSGIYYEPACS 113

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D +G  YW+VKNSW+  WG++GYI +A+++
Sbjct: 114 SENLDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGNDGYIYIAKDK 161


>gi|225706370|gb|ACO09031.1| Cathepsin L precursor [Osmerus mordax]
          Length = 337

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI+DN G+D+E +YPY                              + + D  C
Sbjct: 185 MDQAFQYIQDNSGLDSEEAYPY------------------------------LGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G++DIP G E+ L  A+A++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 215 NYKAEFSAANDTGFMDIPSGKEHALMKAIASVGPVSVAIDAGHESFQFYQSGIYYEKECS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 275 SEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYILMAKDR 322


>gi|310975575|gb|ADP55136.1| truncated cathepsin L-like protein [Miichthys miiuy]
          Length = 246

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E +YPY                              + +GD  C
Sbjct: 94  MDQAFQYVKDNQGLDSEDAYPY------------------------------LGTGDQPC 123

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G++D+P G E+ L  AVA +GPVS+AIDASH+SFQFY  G+YYE +C+
Sbjct: 124 HYDPNYNSANDTGFIDVPSGKEHALMKAVAAVGPVSVAIDASHESFQFYQSGIYYEKDCS 183

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 184 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 231


>gi|146152090|gb|ABQ08058.1| cathepsin L [Misgurnus mizolepis]
          Length = 337

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 105/168 (62%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN+G+D+E +YPY                              + + D  C
Sbjct: 185 MDQAFQYIKDNNGLDSEEAYPY------------------------------LGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E+ L  AVA++GPVS+AIDA H+SFQFY  G+Y+E EC+
Sbjct: 215 HYDPKYNAANDTGFVDIPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYFEKECS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+ +WGD+GYI MA++R
Sbjct: 275 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSESWGDKGYIYMAKDR 322


>gi|339765072|gb|AEK01110.1| cathepsin L [Cristaria plicata]
 gi|397880684|gb|AFO67888.1| cathepsin L [Cristaria plicata]
          Length = 333

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 103/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD++F YIK+N+GID E +YPYEA                                D  C
Sbjct: 186 MDKSFTYIKNNNGIDKEEAYPYEAR-------------------------------DGPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++R++ GA DRGYVD+PE DE  L+ AVATIGP+S+AID  H +F+FY  GV+  P C+
Sbjct: 215 RFRRSEVGATDRGYVDLPENDETALRHAVATIGPISVAIDGHHFNFRFYDHGVFDNPNCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+++H VLVVGYGT  NG DYW+VKNSW   WG +GYI M+RN
Sbjct: 275 KTKINHGVLVVGYGT-RNGLDYWMVKNSWGRGWGAKGYILMSRN 317


>gi|50657029|emb|CAH04632.1| cathepsin L [Suberites domuncula]
          Length = 324

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+  NHG+DTESSYPY                               T+ D  C
Sbjct: 177 MDDAFRYVISNHGVDTESSYPY-------------------------------TAKDGYC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+ +   GA +  Y DI  G E  L  A A IGP+S+AIDASH+SFQFY  GVYYEP C+
Sbjct: 206 RFNQNNVGATETSYRDIARGSESSLTQASAQIGPISVAIDASHRSFQFYKNGVYYEPSCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VLVVGYGT E G DY++VKNSW T WG +GYI M+RNR
Sbjct: 266 SSRLDHGVLVVGYGT-EGGQDYFIVKNSWGTRWGMDGYIMMSRNR 309


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F+YI DN GIDTESSYPY A                                +  C
Sbjct: 183 MDLGFEYIFDNGGIDTESSYPYMA------------------------------KNEPQC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YKR+ SGA   G VDI  G E  L  AVA +GP+S+AIDA H+SFQ Y  GVYYEP C+
Sbjct: 213 MYKRSNSGATLTGCVDIKRGSESALMKAVADVGPISVAIDAGHKSFQMYKSGVYYEPSCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VG+G D NG D+WLVKNSW   WG EGYI M+RNR
Sbjct: 273 SVKLDHGVLAVGFGAD-NGEDFWLVKNSWGPIWGMEGYIMMSRNR 316



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 7/124 (5%)

Query: 116 EPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWN----TTWGDEGY--IKMARNRVYYE 169
           EP+C   + +    + G    + G++  L+K   +    +   D G+   +M ++ VYYE
Sbjct: 209 EPQCMYKRSNSGATLTGCVDIKRGSESALMKAVADVGPISVAIDAGHKSFQMYKSGVYYE 268

Query: 170 PECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSAS 229
           P C+S +LDH VL VG+G D NG D+WLVKNSW   WG EGYI M+RNR+NNCG+A+ AS
Sbjct: 269 PSCSSVKLDHGVLAVGFGAD-NGEDFWLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQAS 327

Query: 230 FPLV 233
           +PLV
Sbjct: 328 YPLV 331


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N+GIDTE+SYPY+A                                D  C
Sbjct: 183 MDDAFTYIKANNGIDTEASYPYKAR-------------------------------DGKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K A  GA D G+VDI   DE  LK AVAT+GP+S+AIDASH SFQ Y  GVY++  C+
Sbjct: 212 EFKSADVGATDTGFVDIKTKDEEALKQAVATVGPISVAIDASHMSFQLYRTGVYHDWFCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYGT E+  DYWLVKNSW  +WG +GYI+M+RNR
Sbjct: 272 QTKLDHGVLAVGYGT-EDSKDYWLVKNSWGESWGQKGYIQMSRNR 315


>gi|317135059|gb|ADV03094.1| cathepsin L [Hyriopsis cumingii]
 gi|372126672|gb|AEX88474.1| cathepsin L [Hyriopsis schlegelii]
          Length = 333

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/164 (49%), Positives = 102/164 (62%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD++F YIKDN+GIDTE +YPYEA                                D  C
Sbjct: 186 MDKSFTYIKDNNGIDTEEAYPYEAR-------------------------------DGPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++R++ GA  RGYVD+PE DE  L+ AV TIGP+S+AID  H +F+FY  GV+  P C+
Sbjct: 215 RFRRSEVGATVRGYVDLPENDEIALQHAVTTIGPISVAIDGHHFNFRFYHHGVFDNPNCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+++H VLVVGYGT  +G DYWLVKNSW   WG EGYI M+RN
Sbjct: 275 KTKINHGVLVVGYGT-RDGLDYWLVKNSWGERWGAEGYILMSRN 317


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+N GIDTE SYPY                               T+ D  C
Sbjct: 178 MDYAFKYIKNNDGIDTEQSYPY-------------------------------TARDGQC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA   GY D+  G E  L++AVAT+GP+S+AIDA H SFQ Y  GVY EP+C+
Sbjct: 207 HFKPGSVGATVTGYTDVQRGSEGDLQSAVATVGPISVAIDAGHSSFQLYKTGVYSEPDCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VGYG  E+G DYWLVKNSW   WG  GYIKM+RN+
Sbjct: 267 STQLDHGVLAVGYGA-EDGKDYWLVKNSWGEGWGMNGYIKMSRNK 310


>gi|37786769|gb|AAO64471.1| cathepsin L precursor [Fundulus heteroclitus]
          Length = 337

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 102/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 185 MDQAFQYVKDNQGLDSEDSYPY------------------------------LGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A D G+VDIP G+E  L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 215 HYDPKFSAANDTGFVDIPSGNERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  +W+VKNSW+  WGD+GYI MA++R
Sbjct: 275 SEELDHGVLAVGYGFQGEDVDGKKFWIVKNSWSENWGDKGYIYMAKDR 322


>gi|33242878|gb|AAQ01143.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|33242876|gb|AAQ01142.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E SYPY                              + + D  C
Sbjct: 184 MDQAFQYIKDNQGLDSEDSYPY------------------------------LGTDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G++DIP G E  L  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 214 HYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 274 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 321


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQYI D  GIDTE SYPY AM                               D NC
Sbjct: 185 MDRAFQYIIDAGGIDTEESYPYIAM-------------------------------DGNC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K A  GA   GY D+  G E  L+ AVA IGP+S+AIDASH SFQ Y  GVY EP C+
Sbjct: 214 HFKTANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT  +G DYW+VKNSW  TWG  GYI M+RN+
Sbjct: 274 STLLDHGVLAVGYGTTIDGTDYWIVKNSWAETWGMNGYIWMSRNK 318


>gi|41688064|dbj|BAD08618.1| cathepsin L preproprotein [Cyprinus carpio]
          Length = 337

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKD +G+D+E SYPY                              V + D  C
Sbjct: 185 MDQAFQYIKDQNGLDSEESYPY------------------------------VGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A D G+VDIP G E+ L  A+A +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 215 HYDPKYSAANDTGFVDIPSGKEHALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  YW+VKNSW+  WGD+GY+ MA++R
Sbjct: 275 SEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSENWGDKGYVYMAKDR 322


>gi|33242872|gb|AAQ01140.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E SYPY                              + + D  C
Sbjct: 184 MDQAFQYIKDNQGLDSEDSYPY------------------------------LGTDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G++DIP G E  L  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 214 HYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 274 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 321


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  161 bits (407), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 106/168 (63%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+ +E  +KA VAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQQEEALMKA-VATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|33242874|gb|AAQ01141.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|312381834|gb|EFR27484.1| hypothetical protein AND_05795 [Anopheles darlingi]
          Length = 508

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/163 (47%), Positives = 101/163 (61%), Gaps = 31/163 (19%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           ++FQYI+ NHGIDTE SYPY+A                                +  C Y
Sbjct: 362 RSFQYIEQNHGIDTEKSYPYQAK-------------------------------EGPCAY 390

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
                GA  +GYV IP GDE  L  AVAT+GP+SI +D+ H +F+ Y++GVYY+ +C++T
Sbjct: 391 NPKAIGAKVKGYVHIPTGDEDALMKAVATVGPISIVVDSRHHTFKHYADGVYYDSQCSAT 450

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            L HA+LVVGYGT + G D+WLVKNSW T+WG +GYIKMARNR
Sbjct: 451 NLTHAMLVVGYGTSKKGEDFWLVKNSWGTSWGIKGYIKMARNR 493



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 48/62 (77%)

Query: 79  EGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDEN 138
           +GDE  L  AVATIGP++I++DA H+SFQ Y  GVYYEP+CN + L H++LVVGYGT E 
Sbjct: 250 DGDEDALMKAVATIGPIAISMDAGHKSFQSYGAGVYYEPQCNPSSLTHSMLVVGYGTTEQ 309

Query: 139 GN 140
           G 
Sbjct: 310 GK 311


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/164 (51%), Positives = 96/164 (58%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI  N+GIDTESSYPY A                                D  C
Sbjct: 177 MDQAFQYIISNNGIDTESSYPYTAQ-------------------------------DGTC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  A  GA    Y DI  G E  L+ AVAT+GP+S+AIDAS  SFQFYS GVY EP C+
Sbjct: 206 QFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPACS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S+QLDH VL VGYGT    +DYWLVKNSW T+WG  GYI M RN
Sbjct: 266 SSQLDHGVLAVGYGT-SGSSDYWLVKNSWGTSWGQSGYIWMTRN 308


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 98/165 (59%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQYI D  GIDTE+SYPY+A+                               D  C
Sbjct: 185 MDRAFQYIIDAGGIDTEASYPYKAV-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+A  GA   GY D+  G E  L+ AVA +GP+S+AIDASH SFQ Y  GVY EP C+
Sbjct: 214 HFKKANVGATVTGYTDVTSGSEKALQKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCD 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT  +G DYW+VKNSW  TWG  GY+ M+RN+
Sbjct: 274 STVLDHGVLAVGYGTSSDGTDYWIVKNSWAETWGMNGYVWMSRNK 318


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/166 (48%), Positives = 103/166 (62%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YIKDN GIDTE +YPY                                  D +C
Sbjct: 198 MTNAFKYIKDNKGIDTEEAYPYAGR-------------------------------DGDC 226

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++K+ K GA   G+V+IP G+E KL+ A+AT+GPVS+AIDA+HQSF  Y  GVY EPEC+
Sbjct: 227 KFKKNKVGATVTGFVEIPAGNEKKLQEALATVGPVSVAIDANHQSFMLYKSGVYDEPECD 286

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           S QLDH VL VGYG+  +G DY++VKNSW TTWG++GYI+ +   V
Sbjct: 287 SAQLDHGVLAVGYGSI-HGKDYYIVKNSWGTTWGEQGYIRFSTTAV 331


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDYAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|311265493|ref|XP_003130681.1| PREDICTED: cathepsin L1-like [Sus scrofa]
          Length = 332

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/167 (50%), Positives = 104/167 (62%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY           F +                    D +C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPY-----------FGK--------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D GYVDIP+  E  L  AVAT+GP+S+ IDASH+SFQFYS G+Y+EP+C+
Sbjct: 212 KYKPQSSAANDTGYVDIPK-QEKALMKAVATVGPISVGIDASHESFQFYSTGIYFEPQCS 270

Query: 121 STQLDHAVLVVGYGTD--ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   + N YWLVKNSW  TWG +GYIKM +++
Sbjct: 271 SEDLDHGVLVVGYGVEGAHSNNKYWLVKNSWGNTWGMDGYIKMTKDQ 317


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN+GIDTE SYPYEA                                +  C
Sbjct: 178 MDNAFRYIKDNNGIDTEESYPYEAK-------------------------------NGPC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA    YVDI  G E  L+ AVA  GPVS+AIDAS  +F FYS G+YY+ +C+
Sbjct: 207 RFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYYDEKCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDH VL VGYGTD++ +DYWLVKNSWN TWGD GYIKM+RNR
Sbjct: 267 SSFLDHGVLAVGYGTDDS-SDYWLVKNSWNETWGDSGYIKMSRNR 310


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YIK N GIDTE++YPY                               T  D  C
Sbjct: 183 MDQAFTYIKKNGGIDTEAAYPY-------------------------------TGSDGTC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+   K GA   G+VD+  GDE  LK AVAT+GP+S+AIDAS   FQFY  GVY    C+
Sbjct: 212 RFLENKVGATVSGFVDVKSGDENALKEAVATVGPISVAIDASSIFFQFYRGGVYNPWFCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGYGT E G DYWLVKNSW ++WG +GYIKM RN+
Sbjct: 272 STELDHGVLVVGYGT-EGGKDYWLVKNSWGSSWGLKGYIKMVRNK 315


>gi|342675481|gb|AEL31666.1| cathepsin L [Cynoglossus semilaevis]
          Length = 336

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 184 MDQAFQYVKDNQGLDSEDSYPY------------------------------LGTDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +   D G+VDIP G E+ L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 214 HYDPKYNSVNDTGFVDIPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 274 SEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 321


>gi|226821421|gb|ACO82386.1| cathepsin L-like protein [Lutjanus argentimaculatus]
          Length = 301

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E SYPY                              + + D  C
Sbjct: 149 MDQAFQYIKDNQGLDSEDSYPY------------------------------LGTDDQPC 178

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E  L  AVA +GPVS+AIDA H+SFQFY  G+YYE +C+
Sbjct: 179 HYDPKYNSANDTGFVDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCS 238

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 239 SEELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 286


>gi|119433808|gb|ABL74967.1| cysteine protease [Acanthamoeba castellanii]
          Length = 330

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/165 (53%), Positives = 98/165 (59%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI +N GIDTE+SYPYE                               +   NC
Sbjct: 184 MDYAFEYIINNKGIDTEASYPYE-------------------------------TAQYNC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SG     Y D+  GDE  L  AVA I P S+AIDASH SFQFYS GVYYE  C+
Sbjct: 213 RYNPANSGGSLTSYTDVSSGDENALLNAVA-IEPTSVAIDASHNSFQFYSGGVYYESSCS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VG+GT ENG DYWLVKNSW   WG +GYIKMARNR
Sbjct: 272 STQLDHGVLAVGWGT-ENGQDYWLVKNSWGADWGLQGYIKMARNR 315


>gi|356984263|gb|AET43955.1| cathepsin L2, partial [Reishia clavigera]
          Length = 278

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 81/157 (51%), Positives = 97/157 (61%), Gaps = 32/157 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE SYPY A+                               D+ C
Sbjct: 154 MDQAFEYIKRNKGIDTEQSYPYRAV-------------------------------DEKC 182

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+ RA  GA D GY DI +G E  L++AVAT+GP+S+AIDAS  SFQ Y  GVYYEP+C+
Sbjct: 183 RFSRADVGATDTGYTDIHKGSEKDLQSAVATVGPISVAIDASRDSFQLYKSGVYYEPKCS 242

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
           ST LDH VL VGYGT ++  DYW+VKNSW T WG +G
Sbjct: 243 STMLDHGVLAVGYGTTDS-KDYWIVKNSWGTQWGMKG 278


>gi|33242870|gb|AAQ01139.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 102/167 (61%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI  N G+DTE SYPY A                              + D+ C
Sbjct: 183 MDQAFQYITANGGLDTEESYPYTA------------------------------TDDEPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|261289789|ref|XP_002611756.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
 gi|229297128|gb|EEN67766.1| hypothetical protein BRAFLDRAFT_236363 [Branchiostoma floridae]
          Length = 308

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 97/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE  Y Y                                  +  C
Sbjct: 160 MDQAFKYIKMNGGIDTEECYSYRG------------------------------RDESMC 189

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK + SGA    Y DI  GDE  L  AV+T+GP+S+AIDA H+SFQ Y  GVY EP+C+
Sbjct: 190 RYKSSCSGATLSSYTDIKTGDEMALMQAVSTVGPISVAIDAGHKSFQLYHHGVYDEPKCS 249

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYG+  NG+DYWLVKNSW T WG EGYI M+RN+
Sbjct: 250 STHLDHGVLAVGYGSS-NGSDYWLVKNSWGTEWGMEGYIMMSRNK 293


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 157 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 185

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 186 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 244

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 245 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 292


>gi|52345644|ref|NP_001004869.1| cathepsin L2 precursor [Xenopus (Silurana) tropicalis]
 gi|49522051|gb|AAH74718.1| MGC69486 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY A                                D  C
Sbjct: 183 MDQAFQYVKDNGGIDSEDSYPYTA------------------------------KDDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+  G E  L  AVA++GPVS+A+DA HQSFQFY  G+YYEPEC+
Sbjct: 213 HYDPNYNSANDTGFVDVTSGSEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGIYYEPECS 272

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G DE+G  YW+VKNSW+  WG++GYI +A++R
Sbjct: 273 SEDLDHGVLVVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDR 320


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +F+Y+K   G +TE +YPY A                        N V        C
Sbjct: 178 MDNSFRYLKSVAGDETEDNYPYTA-----------------------ENGV--------C 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  + +   D+ YVDIP+GDE  LK AVA +GP+S+AIDASH SFQ Y+ GVYY   C+
Sbjct: 207 RYDSSLAVVTDKSYVDIPQGDEDSLKDAVANVGPISVAIDASHSSFQLYNSGVYYASTCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL +GYGT E+G DYWLVKNSW T+WG EGYIKM+RNR
Sbjct: 267 STQLDHGVLAIGYGT-EDGKDYWLVKNSWGTSWGMEGYIKMSRNR 310


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 100/168 (59%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 184 MDQAFQYVKDNQGLDSEDSYPY------------------------------LGTDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +   D G+VDIP G E  L  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 214 HYDPTYNSVNDTGFVDIPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 274 SEELDHGVLVVGYGFQGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 321


>gi|148224022|ref|NP_001087489.1| cathepsin L2 precursor [Xenopus laevis]
 gi|51258284|gb|AAH80004.1| MGC81823 protein [Xenopus laevis]
          Length = 335

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY A                                D  C
Sbjct: 183 MDQAFQYVKDNGGIDSEDSYPYTA------------------------------KDDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+P G E  L  AVA++GPVS+A+DA H+SFQFY  G+YY+PEC+
Sbjct: 213 HYDPNYNSANDTGFVDVPSGSEKDLMKAVASVGPVSVAVDAGHKSFQFYQSGIYYDPECS 272

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D +G  YW+VKNSW+  WG+ GYIK+A++R
Sbjct: 273 SEDLDHGVLVVGYGFEGEDVDGKRYWIVKNSWSEKWGNNGYIKIAKDR 320


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 101/167 (60%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIK N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIKANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+   +E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLIGYKDVKSSNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VLVVGYG   D +   +W+VKNSW   WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNK 319


>gi|47221526|emb|CAG08188.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 362

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 104/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E+SYPY                              + + D  C
Sbjct: 217 MDQAFQYIKDNGGLDSEASYPY------------------------------LATDDQPC 246

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  + + A + G+VD+P G E  L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 247 HYDPSNNSANETGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 306

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  +W+VKNSW+  WG++GYI MA++R
Sbjct: 307 SEELDHGVLVVGYGFQGEDVDGKKFWIVKNSWSENWGNKGYIYMAKDR 354


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 100/165 (60%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQYI D  GIDTE++Y Y A+                               D NC
Sbjct: 185 MDRAFQYIIDAGGIDTEATYSYRAV-------------------------------DGNC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+A  GA   GY D+  G E  L+ AVA IGP+S+AIDASH+ F+FY  GVY EP C+
Sbjct: 214 HFKKANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGVYNEPGCS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T+L HAVLVVGYGT  +G DYW+VKNSW  TWG  GY+ M+RN+
Sbjct: 274 TTRLGHAVLVVGYGTTSDGTDYWIVKNSWAKTWGMNGYLWMSRNK 318


>gi|1705639|sp|Q10991.1|CATL1_SHEEP RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
          Length = 217

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 70  MDNAFQYIKENGGLDSEESYPYEAT-------------------------------DTSC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 99  NYKPEYSAAKDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCS 157

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   N +W+VKNSW   WG++GY+KMA+++
Sbjct: 158 SKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQ 202


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSLGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF YIK N+GIDTE+SYPYEA                                D +C
Sbjct: 176 MNDAFDYIKANNGIDTEASYPYEAR-------------------------------DGSC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+      A   G+ +I  G E  L+ AV  IGP+S+ IDA+H SFQFYS GVYYEP C+
Sbjct: 205 RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCS 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + LDHAVL VGYG+ E G D+WLVKNSW T+WGD GYIKM+RNR
Sbjct: 265 PSYLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGDAGYIKMSRNR 308


>gi|37994576|gb|AAH60335.1| Unknown (protein for MGC:68554) [Xenopus laevis]
          Length = 335

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 99/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY A                                D  C
Sbjct: 183 MDQAFQYVKDNGGIDSEDSYPYTA------------------------------KDDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+  G E  L  AVA++GPVS+AIDA HQSFQFY  G+YYEPEC+
Sbjct: 213 HYDPNNNSANDTGFVDVQSGCEKDLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEPECS 272

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG    D +G  YW+VKNSW+  WGD GYI +A++R
Sbjct: 273 SEDLDHGVLVVGYGFESEDVDGKKYWIVKNSWSEKWGDNGYINIAKDR 320


>gi|33242882|gb|AAQ01145.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 101/167 (60%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI  N G+DTE SYPY A                              + D  C
Sbjct: 183 MDQAFQYIPANGGLDTEESYPYTA------------------------------TDDKPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA   GY D+  G+E+ LK AVAT+GPVS+AIDA H+SFQFYS GVY EP+C+
Sbjct: 213 KFDNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCS 272

Query: 121 STQLDHAVLVVGYGT--DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + QLDH VL VGYG   D +   +W+VKNSW  +WGD+GYI M+RN+
Sbjct: 273 TEQLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNK 319


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI    GIDTE SYPY+A+                               D  C
Sbjct: 187 MDQAFQYIIKAGGIDTEESYPYKAV-------------------------------DGEC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+A  GA   GY D+    E  L+ AVA IGP+S+AIDASH SFQ Y  GVY EP+C+
Sbjct: 216 HFKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT  +G DYW+VKNSW  TWG  GY+ M+RN+
Sbjct: 276 STLLDHGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNK 320


>gi|348531585|ref|XP_003453289.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 366

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +AFQYI+ N GIDTE+SYPYEA                                   C
Sbjct: 219 VKRAFQYIQANGGIDTEASYPYEAK-------------------------------GQQC 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK    GA   GYV++   +E  LK AVATIGP+S+ IDASH SF+FY  GVY EP+C+
Sbjct: 248 RYKPDGIGAKCTGYVEVKPSNEDALKEAVATIGPISVGIDASHNSFRFYQSGVYDEPDCS 307

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T L+H VL VGYGT ENG+DYWL+KNSW   WGD+GYIKM+RN+
Sbjct: 308 KTVLNHDVLAVGYGT-ENGHDYWLIKNSWGIRWGDKGYIKMSRNK 351


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYI++A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIEIAKDR 318


>gi|2706547|emb|CAA75862.1| putative cathepsin L [Xenopus laevis]
          Length = 231

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 99/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY A                                D  C
Sbjct: 79  MDQAFQYVKDNGGIDSEDSYPYTA------------------------------KDDQEC 108

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+  G E  L  AVA++GPVS+AIDA HQSFQFY  G+YYEPEC+
Sbjct: 109 HYDPNNNSANDTGFVDVQSGCEKDLMKAVASVGPVSVAIDAGHQSFQFYQSGIYYEPECS 168

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG    D +G  YW+VKNSW+  WGD GYI +A++R
Sbjct: 169 SEDLDHGVLVVGYGFESEDVDGKKYWIVKNSWSEKWGDNGYINIAKDR 216


>gi|395819351|ref|XP_003783057.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 106/168 (63%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPY+AM                               D++C
Sbjct: 183 MDYAFQYIKENGGLDSEESYPYDAM-------------------------------DESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+VDIP+ +E  L  AVAT+GP+S+AIDA H+SFQFY EGVY+EPEC+
Sbjct: 212 KYRPEYSVANDTGFVDIPK-EEKALMKAVATVGPISVAIDAGHESFQFYKEGVYFEPECS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N +WLVKNSW   WG  GYIKM +++
Sbjct: 271 SDNVDHGVLVVGYGYEETESDNNKFWLVKNSWGEEWGLGGYIKMTKDQ 318


>gi|2239109|emb|CAA70694.1| cathepsin S-like cysteine proteinase [Heterodera glycines]
          Length = 353

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y++DN+G+DTE SYPYEA+                                  C
Sbjct: 205 MDSAFEYVRDNNGLDTEESYPYEAVTG-------------------------------KC 233

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++K    G     + D+ +GDE +LK AVATIGP+S+A+DAS+ SFQFY  GVYYE  C+
Sbjct: 234 QFKNETVGGTVVSFKDLKKGDEEQLKIAVATIGPISVALDASNLSFQFYKTGVYYERWCS 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VL+VGYGTDE   DYWLVKNSW   WG+ GYI++ARN+
Sbjct: 294 NRYLDHGVLLVGYGTDETHGDYWLVKNSWGPHWGENGYIRIARNK 338


>gi|47086859|ref|NP_997749.1| cathepsin L, 1 a precursor [Danio rerio]
 gi|42542930|gb|AAH66490.1| Cathepsin L1, a [Danio rerio]
          Length = 337

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 100/168 (59%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KD +G+D+E SYPY                              + + D  C
Sbjct: 185 MDQAFQYVKDQNGLDSEESYPY------------------------------LGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +    S A D G+VDIP G E  L  A+A +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 215 HFDPKNSAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 275 SEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSENWGDKGYIYMAKDR 322


>gi|291224872|ref|XP_002732426.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 691

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 101/164 (61%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YI+D +GI+ E+ YPY                               T+ DD C
Sbjct: 544 MDQAFAYIED-YGIEPEADYPY-------------------------------TAKDDPC 571

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +K+ A + GY DI   DE  L+ AVAT+GP+S+AIDASH SF+ Y  GVY EP C+
Sbjct: 572 SYDTSKAVATNTGYTDIATMDEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEPACS 631

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T LDH VL VGYGT ++GNDYW+VKNSW +TWG++GYI M+RN
Sbjct: 632 QTMLDHGVLAVGYGTTDDGNDYWIVKNSWGSTWGNQGYIHMSRN 675


>gi|301789679|ref|XP_002930256.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281343339|gb|EFB18923.1| hypothetical protein PANDA_020645 [Ailuropoda melanoleuca]
          Length = 334

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 103/168 (61%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+K+N G+D+E SYPY                              + +  D+C
Sbjct: 183 MDNAFQYVKENGGLDSEESYPY------------------------------LGTDTDSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA HQSFQFY  G+YY+P+C+
Sbjct: 213 KYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHQSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGTNGYVKMAKDQ 319


>gi|395514296|ref|XP_003761355.1| PREDICTED: cathepsin L1-like [Sarcophilus harrisii]
          Length = 262

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K N GIDTE SYPY                                  D  C
Sbjct: 113 MDNAFEYVKKNGGIDTEESYPY-------------------------------VGKDGTC 141

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    SGA   GYVDIP G E  L  AVAT+GP+S+AIDA H SFQFY  GVYYEPEC+
Sbjct: 142 HYNSQCSGANVTGYVDIPAGVERALAKAVATVGPISVAIDAGHSSFQFYRSGVYYEPECS 201

Query: 121 STQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S +LDH VLVVG+G + +NG  YW+VKNSW   WGD GY+ M R+
Sbjct: 202 SEELDHGVLVVGFGVEGKNGKKYWIVKNSWGEEWGDRGYVLMTRD 246


>gi|340370270|ref|XP_003383669.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 326

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +F+Y++   G  +E  YPY                               T+ D  C
Sbjct: 177 MDNSFRYLETVAGDMSEEMYPY-------------------------------TAEDGFC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY+ +++ A D GY DIP GDE  LK AVAT+GP+S+AIDA H+SFQ Y EG+YYEP C+
Sbjct: 206 RYRSSEAIAKDTGYKDIPRGDEDALKEAVATVGPISVAIDAGHRSFQLYHEGIYYEPACS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VL VGYGT E G +YWLVKNSW  +WG+EGY+ M+RNR
Sbjct: 266 STKLDHGVLAVGYGTGE-GEEYWLVKNSWGPSWGNEGYVMMSRNR 309


>gi|332260024|ref|XP_003279085.1| PREDICTED: cathepsin L1 isoform 3 [Nomascus leucogenys]
 gi|441593306|ref|XP_004087072.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
 gi|441593309|ref|XP_004087073.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
          Length = 333

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+A+DA HQSFQFY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAVDAGHQSFQFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|348514005|ref|XP_003444531.1| PREDICTED: cathepsin L1-like [Oreochromis niloticus]
          Length = 338

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 186 MDQAFQYVKDNQGLDSEESYPY------------------------------LGTDDQKC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +   D G+VDI  G E+ L  AV  +GP+S+AIDA H+SFQFY  G+YYEPEC+
Sbjct: 216 HYDPRYNAVNDTGFVDIKSGSEHALMKAVTAVGPISVAIDAGHESFQFYQSGIYYEPECS 275

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL+VGY   G D +G  YW+VKNSW+  WGD+GY+ MA++R
Sbjct: 276 SEELDHGVLLVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGYVYMAKDR 323


>gi|157644745|gb|ABV59078.1| cathepsin L [Lates calcarifer]
          Length = 337

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 185 MDQAFQYVKDNQGLDSEDSYPY------------------------------LGTDDQPC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+P G E  L  AVA +GPVS+AIDA H+SFQFY  G+YYE +C+
Sbjct: 215 HYDPNYNSANDTGFVDVPSGKERALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 275 SEELDHGVLVVGYGYEGEDVDGKKYWIVKNSWSEKWGDKGYIYMAKDR 322


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF YIK N+GIDTE++YPYEA                                D +C
Sbjct: 176 MNDAFDYIKANNGIDTEAAYPYEAR-------------------------------DGSC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+      A   G+ +I  G E  L+ AV  IGP+S+ IDA+H SFQFYS GVYYEP C+
Sbjct: 205 RFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCS 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + LDHAVL VGYG+ E G D+WLVKNSW T+WGD GYIKM+RNR
Sbjct: 265 PSYLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGDAGYIKMSRNR 308


>gi|449681105|ref|XP_002158608.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 339

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/166 (52%), Positives = 102/166 (61%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIKDN GID+E  YPY A          R L Y                    C
Sbjct: 189 MDNAFTYIKDNKGIDSEVGYPYYA----------RALGY--------------------C 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y +  + A D G+VDIP GDE  LK AVAT+GP+S+AIDA+  SF  Y  GVY EP C 
Sbjct: 219 YYNQQYNVASDTGFVDIPSGDENALKVAVATVGPISVAIDATKASFMSYQSGVYNEPTCG 278

Query: 121 S--TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +    LDHAVLVVGYGT+E G D+W+VKNSW+TTWGD+GYIKM+RN
Sbjct: 279 NGIENLDHAVLVVGYGTEE-GRDFWIVKNSWDTTWGDQGYIKMSRN 323


>gi|23452059|gb|AAN32912.1| cathepsin [Danio rerio]
          Length = 310

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 100/168 (59%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KD +G+D+E SYPY                              + + D  C
Sbjct: 158 MDQAFQYVKDQNGLDSEESYPY------------------------------LGTDDQPC 187

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +    S A D G+VDIP G E  L  A+A +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 188 HFDPKNSAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 247

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D +G  YW+VKNSW+  WGD+GYI MA++R
Sbjct: 248 SEELDHGVLAVGYGFEGEDVDGKKYWIVKNSWSENWGDKGYIYMAKDR 295


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A   G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEFAVANGTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   GTD N N YWLVKNSW + WG EGYIK+A++R
Sbjct: 271 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDR 318


>gi|261289787|ref|XP_002611755.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
 gi|229297127|gb|EEN67765.1| hypothetical protein BRAFLDRAFT_284339 [Branchiostoma floridae]
          Length = 327

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 95/165 (57%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE  YPY+                                 +  C
Sbjct: 179 MDQAFKYIKTNGGIDTEECYPYKG------------------------------KNERKC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK + SGA    YVDI  GDE  L  A ATIGP+S+ IDASH SFQ Y  GVY+E  C+
Sbjct: 209 EYKSSCSGATLSSYVDIKTGDEDALMQASATIGPISVGIDASHPSFQLYDHGVYHEKRCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGTD    DYWLVKNSW   WG EGYIKM+RN+
Sbjct: 269 SKKLDHGVLVVGYGTDGE-KDYWLVKNSWGEEWGMEGYIKMSRNK 312


>gi|403300975|ref|XP_003941187.1| PREDICTED: cathepsin L1-like isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403300977|ref|XP_003941188.1| PREDICTED: cathepsin L1-like isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403300979|ref|XP_003941189.1| PREDICTED: cathepsin L1-like isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 333

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 107/168 (63%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+++N G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQENGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+ ++  +KA VAT+GP+S+AIDA H+SFQFY EG+Y+EPEC+
Sbjct: 212 KYNPKYSVANDTGFVDIPKLEKALMKA-VATVGPISVAIDAGHESFQFYKEGIYFEPECS 270

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG +  G+D   YWLVKNSW   WG +GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFERTGSDNSKYWLVKNSWGEEWGMDGYIKMAKDR 318


>gi|296189340|ref|XP_002742739.1| PREDICTED: cathepsin L1 [Callithrix jacchus]
          Length = 333

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 107/168 (63%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+++N G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQENGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+ ++  +KA VAT+GP+S+AIDA H+SFQFY EG+Y+EPEC+
Sbjct: 212 KYNPEYSVANDTGFVDIPKLEKALMKA-VATVGPISVAIDAGHESFQFYKEGIYFEPECS 270

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG +  G+D   YWLVKNSW   WG +GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFERTGSDNSKYWLVKNSWGEKWGMDGYIKMAKDR 318


>gi|225579644|gb|ACN93991.1| cathepsin L [Dicentrarchus labrax]
          Length = 316

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 100/167 (59%), Gaps = 33/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E SYPY                              + + D  C
Sbjct: 180 MDQAFQYVKDNQGLDSEDSYPY------------------------------LGTDDQPC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E+ L  AVA +GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 210 HYDPNYNSANDTGFVDIPSGKEHALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKECS 269

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S +LDH VLVVGY   G D +G  YW+V NSW+  WGDEGYI +A++
Sbjct: 270 SEELDHGVLVVGYGFEGQDVDGKKYWIVNNSWSEKWGDEGYIYLAKD 316


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YIKDN GIDTESSYPYEA                                D +C
Sbjct: 174 MTSAFDYIKDNGGIDTESSYPYEAE-------------------------------DRSC 202

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA+  G V+I +  E  L+ AV+ +GP+S+AIDASH SFQFYS GVYYE  C+
Sbjct: 203 RFDANSIGAICTGSVEIVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCS 262

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL VGYGT E+  DYWLVKNSW ++WGD GYIKM+RNR
Sbjct: 263 PTFLDHGVLAVGYGT-ESTKDYWLVKNSWGSSWGDAGYIKMSRNR 306


>gi|326672297|ref|XP_003199631.1| PREDICTED: cathepsin L1-like [Danio rerio]
          Length = 336

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP+G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|157278115|ref|NP_001098156.1| cathepsin L precursor [Oryzias latipes]
 gi|50251128|dbj|BAD27581.1| cathepsin L [Oryzias latipes]
          Length = 336

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN G+D+E  YPY+                               + D  C
Sbjct: 184 MDQAFQYVKDNQGLDSEDFYPYKG------------------------------TDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S   D G+VDIP G E  L  AVA++GPVS+AIDA H+SFQFY  G+Y+E EC+
Sbjct: 214 QYNAQYSAVNDTGFVDIPSGKERALMKAVASVGPVSVAIDAGHESFQFYQSGIYFEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+G+I MA++R
Sbjct: 274 SDELDHGVLVVGYGFEGEDVDGKKYWIVKNSWSEKWGDKGFIYMAKDR 321


>gi|157311713|ref|NP_001098585.1| uncharacterized protein LOC564979 precursor [Danio rerio]
 gi|156230121|gb|AAI52284.1| Wu:fa26c03 protein [Danio rerio]
          Length = 336

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|387914010|gb|AFK10614.1| cathepsin L [Callorhinchus milii]
 gi|392873762|gb|AFM85713.1| cathepsin L [Callorhinchus milii]
 gi|392877488|gb|AFM87576.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 98/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY                              V + D  C
Sbjct: 186 MDQAFQYVKDNGGIDSEDSYPY------------------------------VGTDDTPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E  L  A+A +GPVS+AIDA H SFQFY  G+Y+E EC+
Sbjct: 216 HYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECS 275

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYG    D +G  YW+VKNSW+  WG  GYI MA+++
Sbjct: 276 STDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDK 323


>gi|392881548|gb|AFM89606.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 98/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY                              V + D  C
Sbjct: 186 MDQAFQYVKDNGGIDSEDSYPY------------------------------VGTDDTPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E  L  A+A +GPVS+AIDA H SFQFY  G+Y+E EC+
Sbjct: 216 HYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECS 275

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYG    D +G  YW+VKNSW+  WG  GYI MA+++
Sbjct: 276 STDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDK 323


>gi|288548564|gb|ADC52430.1| cathepsin L1 cysteine protease [Pinctada fucata]
          Length = 331

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTE SYPY A                                   C
Sbjct: 183 MDFAFEYIQKNDGIDTEQSYPYTAKDGI------------------------------EC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+A  GA D+G VD+P   E  L+ AVAT+GP+S+A+DA H+SFQ Y  G+Y EP C+
Sbjct: 213 RFKKADVGATDKGKVDLPRQSEKALQEAVATVGPISVAMDAGHRSFQLYKRGIYTEPMCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VL VGYG++  G DYWLVKNSW  TWG EG+  +ARN
Sbjct: 273 STKLDHGVLAVGYGSEGEG-DYWLVKNSWGATWGMEGFFMLARN 315


>gi|392884266|gb|AFM90965.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 98/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY                              V + D  C
Sbjct: 186 MDQAFQYVKDNGGIDSEDSYPY------------------------------VGTDDTPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E  L  A+A +GPVS+AIDA H SFQFY  G+Y+E EC+
Sbjct: 216 HYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECS 275

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYG    D +G  YW+VKNSW+  WG  GYI MA+++
Sbjct: 276 STDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKWGQNGYILMAKDK 323


>gi|157787177|ref|NP_001099150.1| cathepsin L1-like precursor [Danio rerio]
 gi|157422879|gb|AAI53505.1| MGC174152 protein [Danio rerio]
          Length = 336

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|116563690|gb|ABJ99858.1| cathepsin L [Hippoglossus hippoglossus]
          Length = 336

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 99/168 (58%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+ DN G+D+E SYPY                                + D  C
Sbjct: 184 MDQAFQYVTDNQGLDSEDSYPYTG------------------------------TDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+P G E+ L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 214 HYDPLYNSANDTGFVDVPSGKEHALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VL VGY   G D+ G  +W+VKNSW   WGD+GYI MA++R
Sbjct: 274 SEELDHGVLAVGYGFEGEDKMGKKFWIVKNSWGEKWGDKGYIYMAKDR 321


>gi|189525868|ref|XP_001341714.2| PREDICTED: cathepsin L1-like isoform 1 [Danio rerio]
          Length = 336

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQ FQYI  N GIDTE  YPY+A                                +  C
Sbjct: 183 MDQGFQYIIQNKGIDTEQCYPYKAK-------------------------------NHRC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +  GA    + D+  GDE  LK A A IGP+S+ IDASHQSFQFYS GVY E EC+
Sbjct: 212 KFDNSCIGATMSSFTDVTSGDEDALKQACANIGPISVGIDASHQSFQFYSSGVYNEFECS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VLVVGYGT     DYWLVKNSW T WG+EGYI M+RN+
Sbjct: 272 STKLDHGVLVVGYGT-YGSKDYWLVKNSWGTVWGNEGYIMMSRNK 315


>gi|18858809|ref|NP_571273.1| cathepsin L, 1 b precursor [Danio rerio]
 gi|1752664|emb|CAA69623.1| cathepsin L [Danio rerio]
          Length = 336

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|246148|gb|AAB21516.1| Cyclic Protein-2 [Rattus sp.]
          Length = 247

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 96  MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 124

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 125 KYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 183

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N + YWLVKNSW   WG +GYIK+A++R
Sbjct: 184 SKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDR 231


>gi|115715524|ref|XP_780580.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 334

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 94/165 (56%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYI D  GIDTE SYPY AM                               D  C
Sbjct: 186 MDQAFQYILDVGGIDTEMSYPYTAM-------------------------------DGQC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +A  GA D GY D+  G E  L+ AVA++GP+S+AIDASHQSFQ Y  GVY EP C+
Sbjct: 215 HFNKANIGATDTGYTDVTTGSESALQMAVASVGPISVAIDASHQSFQLYKSGVYNEPACS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT  +G DY+   +SW   WG  GY+ M+RN+
Sbjct: 275 STLLDHGVLAVGYGTSSDGTDYFFFFHSWGAAWGMNGYLWMSRNK 319


>gi|417399134|gb|JAA46597.1| Putative cathepsin l1 [Desmodus rotundus]
          Length = 335

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY    S                              + C
Sbjct: 184 MDNAFQYVKDNKGLDSEESYPYLGRES------------------------------NTC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFYSEG+YYEP C+
Sbjct: 214 NYRPEYSAANDTGFVDIPQ-HERGLMKAVATVGPISVAIDAGHSSFQFYSEGIYYEPNCS 272

Query: 121 STQLDHAVLVVGYGTD---ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG++    + N +W+VKNSW T WG  GY+KMAR++
Sbjct: 273 SKDLDHGVLVVGYGSEGAQSDSNKFWIVKNSWGTGWGMSGYVKMARDQ 320


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEYAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N + YWLVKNSW   WG +GYIK+A++R
Sbjct: 271 SKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDR 318


>gi|89272015|emb|CAJ83143.1| cathepsin L2 [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 100/168 (59%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY A                                D  C
Sbjct: 183 MDQAFQYVKDNGGIDSEDSYPYTA------------------------------KDDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+    E  L  AVA++GPVS+A+DA HQSFQFY  G+YYEPEC+
Sbjct: 213 HYDPNYNSANDTGFVDVTSESEKDLMNAVASVGPVSVAVDAGHQSFQFYKSGIYYEPECS 272

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G DE+G  YW+VKNSW+  WG++GYI +A++R
Sbjct: 273 SEDLDHGVLVVGYGFEGEDEDGKKYWIVKNSWSEKWGNDGYIYIAKDR 320


>gi|410923307|ref|XP_003975123.1| PREDICTED: cathepsin L1-like [Takifugu rubripes]
          Length = 336

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E SYPY                              + + +  C
Sbjct: 184 MDQAFQYIKDNGGLDSEESYPY------------------------------LGTDEGPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  + + A D G+VD+P G E  L  AVA++GPVS+AIDA H+SFQFY  G+YY+ EC+
Sbjct: 214 HYDPSYNSANDTGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYHSGIYYDKECS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   G D +G  YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SEELDHGVLVVGYGFEGKDVDGKKYWIVKNSWSENWGDKGYIYMAKDK 321


>gi|530734|emb|CAA56914.1| cathepsin l [Nephrops norvegicus]
 gi|1582620|prf||2119193A cathepsin L-related Cys protease
          Length = 324

 Score =  156 bits (394), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           ++QAF+YIK N GIDTESSYPYEA                                D+ C
Sbjct: 177 VNQAFKYIKANGGIDTESSYPYEAR-------------------------------DNTC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+      A   G+V I +G E          GP+S+AIDA+H+SFQ YS GVYYEP C+
Sbjct: 206 RFNSNSVAATCSGFVSIAQGSESPEVRRTTNTGPISVAIDAAHRSFQSYSSGVYYEPSCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+QLDHAVL VGYG+ E G D+WLVKNSW T+WG  GYI MARNR
Sbjct: 266 SSQLDHAVLAVGYGS-EGGQDFWLVKNSWGTSWGSAGYINMARNR 309


>gi|344258279|gb|EGW14383.1| Cathepsin L1 [Cricetulus griseus]
          Length = 295

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN G+DT  SYPYE                               S +  C
Sbjct: 148 MQNAFQYVMDNGGLDTSESYPYE-------------------------------SRNTTC 176

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A   G+V IP  +EY L  AVA +GP+S AID  H SFQFY  G+YYEPEC+
Sbjct: 177 RYNPENSAANVTGFVKIP-ANEYSLMKAVAIVGPISAAIDTKHHSFQFYRGGMYYEPECS 235

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDHAVLVVGYG + +G  YWLVKNSW T WG  GYIKMAR+R
Sbjct: 236 SSNLDHAVLVVGYGEESDGRKYWLVKNSWGTYWGMNGYIKMARDR 280


>gi|253722774|pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform
          Length = 312

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 162 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 190

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 191 KYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 249

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ +GN YWLVKNSW   WG  GY+KMA++R
Sbjct: 250 SEDMDHGVLVVGYGFESTESDGNKYWLVKNSWGEEWGMGGYVKMAKDR 297


>gi|431917800|gb|ELK17041.1| Cathepsin L1 [Pteropus alecto]
          Length = 334

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY A  S                              D C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPYLAKES------------------------------DTC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY++G+YYEP+C+
Sbjct: 213 NYKPEYSAANDTGFVDIPQ-REKSLMKAVATVGPISVAIDAGHSSFQFYNKGIYYEPDCS 271

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLV+GYG+   D   N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVIGYGSEGGDPKSNKFWIVKNSWGPEWGMNGYVKMAKDQ 319


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 99/165 (60%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YIKDN GIDTESSYPYEA                                D +C
Sbjct: 167 MTSAFDYIKDNGGIDTESSYPYEAQ-------------------------------DRSC 195

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA   G+V++   +E  L  AV+ IGP+S+AIDASH SFQFYS GVYYE +C+
Sbjct: 196 RFDANSIGATCTGFVEVQHTEE-ALHEAVSDIGPISVAIDASHFSFQFYSSGVYYEKKCS 254

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL VGYGT E+  DYWLVKNSW + WGD GYIKM+RNR
Sbjct: 255 PTNLDHGVLAVGYGT-ESTEDYWLVKNSWGSGWGDAGYIKMSRNR 298


>gi|318037269|ref|NP_001187182.1| cathepsin L precursor [Ictalurus punctatus]
 gi|196475596|gb|ACG76367.1| cathepsin L [Ictalurus punctatus]
          Length = 336

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+DTE  YPY                              + + D  C
Sbjct: 184 MDQAFQYIKDNGGLDTEKFYPY------------------------------LGTDDQPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  + S A D G+VDIP G E+ L  AV  +GPVS+AIDA H+SFQFY  G+YYE +C+
Sbjct: 214 HYDPSYSAANDTGFVDIPSGKEHALMKAVTAVGPVSVAIDAGHESFQFYQSGIYYEADCS 273

Query: 121 STQLDHAVLVVGYGTD-EN--GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG + EN  G  YW+VKNSW+  WG++GYI MA++R
Sbjct: 274 SEDLDHGVLVVGYGYEGENVDGKKYWIVKNSWSEQWGNKGYIYMAKDR 321


>gi|194741252|ref|XP_001953103.1| GF17600 [Drosophila ananassae]
 gi|190626162|gb|EDV41686.1| GF17600 [Drosophila ananassae]
          Length = 333

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           ++ AF+YI+ N GIDTE SYPYEA                                 + C
Sbjct: 185 VEYAFRYIQSNKGIDTEISYPYEA-------------------------------AQNQC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++R   GA   G+V +  GDE +L  AVAT+GP+S+ I++S  SF+FY +GVY +P CN
Sbjct: 214 RFRRDTIGATSTGFVKLNPGDEMELAQAVATVGPISVLINSSLDSFKFYHDGVYNDPSCN 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             +L HAVLVVGYGTD+ G D+WLVKNSW+T WG++GY+K+ RN
Sbjct: 274 PNKLTHAVLVVGYGTDDRGGDFWLVKNSWSTHWGEQGYVKIKRN 317


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI +  GI TE SYPYE  +                                 C
Sbjct: 187 MDNAFRYIVNKGGIHTEDSYPYEGQVG-------------------------------QC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R    + GA   GY DIP G+E+ LK AVAT GPVS+AI AS QSFQ Y  GVY  P C+
Sbjct: 216 RANYGEIGATCTGYYDIPSGNEHALKEAVATFGPVSVAIHASDQSFQLYHSGVYNNPYCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDHAVL+VGYGT E G DYWLVKNSW   WGD+GYIKM+RNR
Sbjct: 276 GTALDHAVLIVGYGT-EYGQDYWLVKNSWGPAWGDQGYIKMSRNR 319


>gi|261289785|ref|XP_002611754.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
 gi|229297126|gb|EEN67764.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
          Length = 327

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 98/165 (59%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE  YPY A                      +  +V        C
Sbjct: 179 MDQAFRYIKSNGGIDTEECYPYMA----------------------KDEKV--------C 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK + SGA    Y DI   DE  L  AV T+GPVS+AIDASH+S +FY  G+Y EPEC+
Sbjct: 209 DYKTSCSGATLSSYTDIKAMDEMALMQAVGTVGPVSVAIDASHKSLRFYKSGIYDEPECS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+LDH VL VGYG+  +G DYWLVKNSW + WGD GY+KM RN+
Sbjct: 269 RTKLDHGVLAVGYGS-MDGMDYWLVKNSWGSAWGDMGYVKMTRNK 312


>gi|110625773|ref|NP_081620.2| cathepsin L-like 3 precursor [Mus musculus]
 gi|74208432|dbj|BAE26401.1| unnamed protein product [Mus musculus]
 gi|187955662|gb|AAI47425.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
 gi|187957686|gb|AAI47424.1| RIKEN cDNA 2310051M13 gene [Mus musculus]
          Length = 331

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 32/164 (19%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AFQY+KDN G+DT  SYPYEA+                               +  CR
Sbjct: 185 DLAFQYVKDNGGLDTSVSYPYEAL-------------------------------NGTCR 213

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y    S A   G+V++ +  E  L  AVAT+GP+S+ ID  H+SFQFY EG+YYEP+C+S
Sbjct: 214 YNPKNSAATVTGFVNV-QSSEDALMKAVATVGPISVGIDTKHKSFQFYKEGMYYEPDCSS 272

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           T LDHAVLVVGYG + +G  YWLVKNSW   WG  GYIKMA++R
Sbjct: 273 TVLDHAVLVVGYGEESDGRKYWLVKNSWGRDWGMNGYIKMAKDR 316


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/164 (50%), Positives = 96/164 (58%), Gaps = 31/164 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N GIDTE+SYPY                             T T+G   C
Sbjct: 177 MDDAFEYIIKNGGIDTEASYPY-----------------------------TATTG--TC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  A  GA    Y DI  G E  L+ AVAT+GPVS+AIDASH +FQFY  GVY E +C+
Sbjct: 206 KFNAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINFQFYFTGVYNEKKCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +TQLDH VL VGYGT   G DYWLVKNSW  TWG  GYI M+RN
Sbjct: 266 TTQLDHGVLAVGYGTSTEGKDYWLVKNSWGATWGKAGYIWMSRN 309


>gi|66378053|gb|AAY45871.1| cathepsin L-like cysteine proteinase [Longidorus elongatus]
          Length = 358

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 100/165 (60%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++ N GIDTE+SYPY+                                 D  C
Sbjct: 208 MDGAFQYVETNKGIDTEASYPYKGR-------------------------------DGRC 236

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K    GA D G+VDIPEG+E  L+AA+AT+GPVS+AIDA+   FQFYS GVYY+  C+
Sbjct: 237 RFKSEDVGATDTGFVDIPEGNETLLEAAIATVGPVSVAIDAASFKFQFYSHGVYYDRSCS 296

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VL VGY + ++G  Y++VKNSW+  WGD+GYI M+R +
Sbjct: 297 PEYLDHGVLAVGYNSTKDGKQYYIVKNSWSEDWGDDGYILMSRRK 341


>gi|348565223|ref|XP_003468403.1| PREDICTED: cathepsin L1-like [Cavia porcellus]
          Length = 333

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G++ E SYPY                                  D  C
Sbjct: 183 MDFAFQYVKDNKGLEAEKSYPY-------------------------------VGKDGEC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VD+P+  E  ++ A+AT+GP+S+AIDA  QSFQFY EG+YY+P C+
Sbjct: 212 KYKPELSAANDTGFVDVPQ-REKVVQKALATVGPLSVAIDAGLQSFQFYKEGIYYDPGCS 270

Query: 121 STQLDHAVLVVGYGTD--ENGN-DYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VL+VGYGTD  E G  DYWL+KNSW TTWG +GY+K+ARNR
Sbjct: 271 SRDLNHGVLLVGYGTDASETGKGDYWLIKNSWGTTWGADGYVKIARNR 318


>gi|149755226|ref|XP_001494409.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 334

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY A                     K  N         NC
Sbjct: 183 MDNAFQYVKDNGGLDSEESYPYLA---------------------KEGN---------NC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D GYVDIP+  E  L  AVAT+GP+S+AIDA H+SFQFY  G+YY+P+C+
Sbjct: 213 NYKPEYSAANDTGYVDIPQ-KEKALMKAVATVGPISVAIDAGHESFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G D N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGRDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+Y+KDNHGIDTE SYPY                                  D +C
Sbjct: 237 MDQAFEYVKDNHGIDTEDSYPY-------------------------------VGTDGSC 265

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA  +G++D+ EGDE  L+ AV   GPVS+AIDAS   FQFY  GVY  P C+
Sbjct: 266 HFKNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASSMLFQFYRGGVYNVPWCS 325

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +++LDH VLVVGYG    G D+W+VKNSW   WG  GYI+M+RN+
Sbjct: 326 TSELDHGVLVVGYGKQFQGKDFWMVKNSWGVGWGIYGYIEMSRNK 370


>gi|324508904|gb|ADY43753.1| Cathepsin L [Ascaris suum]
          Length = 123

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 83/107 (77%)

Query: 59  NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            C + +   GA D GYVD+PEGDE KLK AVAT GP+S+AIDA H SFQ Y +GVYYEP+
Sbjct: 2   KCHFNKKTVGAEDEGYVDLPEGDEEKLKIAVATQGPISVAIDAGHPSFQMYRKGVYYEPQ 61

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+S  LDH VLVVGYGTDE   DYW+VKNSW   WG++GY+++ARNR
Sbjct: 62  CSSESLDHGVLVVGYGTDEIDGDYWIVKNSWGPGWGEKGYVRIARNR 108


>gi|355681660|gb|AER96816.1| cathepsin L2 [Mustela putorius furo]
          Length = 334

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY A  +                              D+C
Sbjct: 183 MDFAFQYIKDNGGLDSEESYPYLARDT------------------------------DSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA HQSFQFY  G+Y++P+C+
Sbjct: 213 NYKPEYSVANDTGFVDIPQ-RERALMKAVATVGPISVAIDAGHQSFQFYKSGIYFDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGCNGYVKMAKDQ 319


>gi|33520126|gb|AAQ21040.1| cathepsin L precursor [Branchiostoma belcheri tsingtauense]
          Length = 327

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE  YPY+                                 +  C
Sbjct: 179 MDQAFKYIKTNGGIDTEECYPYKG------------------------------RDERKC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK + SGA    +VD+  GDE  LK A ATIGP+S+ IDASH SFQ Y  GVY+E  C+
Sbjct: 209 EYKASCSGATLSSFVDVKTGDEDALKQASATIGPISVGIDASHPSFQLYDHGVYHEKRCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGT ++  DYWLVKNSW   WG EGYI M+RN+
Sbjct: 269 SKKLDHGVLVVGYGT-QSTKDYWLVKNSWGADWGMEGYIMMSRNK 312


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK   G+++E  YPY+                                    C
Sbjct: 212 MDNAFKYIKSVGGLESEEDYPYKPKQG-------------------------------TC 240

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++   K  A D G VD+  G E  LK AV+ +GPVS+AIDASH SFQ Y+ GVY EPEC+
Sbjct: 241 KFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVYDEPECS 300

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VL VGYGTD+ G DYW+VKNSW   WG++GY+KM+RN+
Sbjct: 301 SEQLDHGVLCVGYGTDDQGQDYWIVKNSWGAEWGEDGYVKMSRNK 345


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 183 MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L   VAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 212 KYRAEYAVANDTGFVDIPQ-QEKALMKPVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N + YWLVKNSW   WG +GYIK+A++R
Sbjct: 271 SKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDR 318


>gi|313221001|emb|CBY31833.1| unnamed protein product [Oikopleura dioica]
 gi|313229611|emb|CBY18426.1| unnamed protein product [Oikopleura dioica]
          Length = 362

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 98/165 (59%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KD  G+D E  YPYE +                               +  C
Sbjct: 204 MDAAFQYVKDQDGLDGEDWYPYEGV------------------------------DNKEC 233

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY ++   A D G+  IPEG+E  LK A+A +GPVS+AIDAS+ SFQFY  GVYYEP C+
Sbjct: 234 RYDKSHREADDTGFKMIPEGNEKALKHALAKVGPVSVAIDASNPSFQFYQSGVYYEPNCS 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VL VGYGT E+G  Y+LVKNSW+  WGD GYIKMARN+
Sbjct: 294 PENLDHGVLAVGYGT-EDGEHYYLVKNSWSEAWGDNGYIKMARNK 337


>gi|432108215|gb|ELK33129.1| Cathepsin L1 [Myotis davidii]
          Length = 334

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 102/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+DTE SYPY A  S                              + C
Sbjct: 183 MDNAFQYVKDNKGLDTEESYPYLARES------------------------------NTC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+   S A D G+VDIP+ ++  LKA VAT+GP+S+AIDA H SFQFY+ G+YYEP C+
Sbjct: 213 NYRPEYSAANDTGFVDIPQREKALLKA-VATVGPISVAIDAGHSSFQFYNAGIYYEPNCS 271

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+   +   N +W+VKNSW + WG  GY+KMAR++
Sbjct: 272 SKDLDHGVLVVGYGSEGGESKNNKFWIVKNSWGSGWGMNGYVKMARDQ 319


>gi|15593252|gb|AAL02222.1|AF410882_1 cysteine protease CP14 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 98/165 (59%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K N GIDTE SYPY                               T+ D  C
Sbjct: 185 MDSAFEYVKSNGGIDTEESYPY-------------------------------TAEDGTC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK A +  V+ GY D+    E  L+ AV  +GPVS+AIDAS+ SFQ Y+ G+YYEP C+
Sbjct: 214 LYKAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG++    ++W+VKNSW T+WG+EGYIKMARN+
Sbjct: 274 SDSLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNK 318


>gi|291224868|ref|XP_002732424.1| PREDICTED: cathepsin L-like [Saccoglossus kowalevskii]
          Length = 823

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 94/164 (57%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK   GI+ E  YPY A                                D  C
Sbjct: 676 MDLAFEYIKAAPGIEGEMDYPYLAK-------------------------------DGRC 704

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + ++K  A D GYVDIP  DE  LK AVATIGP+S+AIDA H SFQ Y  GVY EP C+
Sbjct: 705 MFDQSKVVATDTGYVDIPSMDENALKEAVATIGPISVAIDAGHPSFQMYKSGVYNEPGCS 764

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S +LDH VL VGYGT E+G DYWLVKNSW  +WG  GYI M+RN
Sbjct: 765 SERLDHGVLAVGYGT-EDGQDYWLVKNSWGDSWGQAGYIMMSRN 807


>gi|444522624|gb|ELV13407.1| Cathepsin L1 [Tupaia chinensis]
          Length = 307

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 101/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF Y+KDN G+D+E SYPYEA+                               DD+C
Sbjct: 157 MDNAFLYVKDNGGLDSEESYPYEAV-------------------------------DDSC 185

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+V +P  +E  L+ AVAT+GP+S+ IDAS  SFQFY EG+Y+EP C+
Sbjct: 186 KYNPKNSAANDTGFVHLPV-EEKALEKAVATVGPISVGIDASADSFQFYKEGIYFEPNCS 244

Query: 121 STQLDHAVLVVGYGTDENG---NDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDHAVLVVGYG  E     N +WLVKNSW   WG +GYI MA++R
Sbjct: 245 SVELDHAVLVVGYGVMEEASTNNKFWLVKNSWGKNWGMDGYIMMAKDR 292


>gi|221117518|ref|XP_002157675.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 340

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 102/166 (61%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI DN GID+E+ YPY A          + L Y                    C
Sbjct: 190 MDNAFKYISDNKGIDSEAGYPYYA----------KALGY--------------------C 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y +  + A D G+VDI  GDE  LK AVAT+GP+S+AIDA+  SF  Y  GVYYEP C 
Sbjct: 220 YYNQQFNVASDTGFVDIASGDEDALKVAVATVGPISVAIDATKDSFMRYQSGVYYEPTCG 279

Query: 121 S--TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +    LDHAVLVVGYGT E+G D+WLVKNSW+ TWGD+GYIKM+RN
Sbjct: 280 NGLENLDHAVLVVGYGT-EDGRDFWLVKNSWDITWGDQGYIKMSRN 324


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 99/172 (57%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++IKD  G++TE SYPY                               T  D  C
Sbjct: 182 MDNAFRFIKDAGGLETEKSYPY-------------------------------TGKDGTC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +     GA   G+VD+P  DE  LK A   +GPVS+AIDAS Q+FQFY +GVY E  C+
Sbjct: 211 HFDARGIGAKLTGFVDVPSRDEEALKEAAGVVGPVSVAIDASGQNFQFYKDGVYDEITCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           ST LDH VLVVGYGT  +G DYWLVKNSW ++WG  GYI+M+RN+   E +C
Sbjct: 271 STSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQSGYIQMSRNK---ENQC 319


>gi|162138968|ref|NP_001104662.1| uncharacterized protein LOC567623 precursor [Danio rerio]
 gi|158254065|gb|AAI54241.1| Zgc:174153 protein [Danio rerio]
          Length = 336

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDLAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKSTGFVDIPSGNEPALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|81294188|gb|AAI08032.1| Cathepsin L, 1 b [Danio rerio]
          Length = 336

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDLAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C+
Sbjct: 214 RYDPRFNVAKITGFVDIPSGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACS 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 SSRLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 321


>gi|60827856|gb|AAX36816.1| cathepsin L [synthetic construct]
          Length = 334

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY AM                                 +C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPYTAM------------------------------DKQDC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D G+VDIP   E  L  AVAT+GP+S+A+DA H+SFQFY  G+YY+  C+
Sbjct: 213 RYNPKYSAANDTGFVDIPP-QEKALMKAVATVGPISVAVDAGHESFQFYKSGIYYDSNCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGY   G D   N YWLVKNSW T WG +GYIKMA++R
Sbjct: 272 SKDLNHGVLVVGYGFEGIDSANNRYWLVKNSWGTGWGTDGYIKMAKDR 319


>gi|410303012|gb|JAA30106.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|4503155|ref|NP_001903.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|22202619|ref|NP_666023.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081592|ref|NP_001244900.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|384081594|ref|NP_001244901.1| cathepsin L1 isoform 1 preproprotein [Homo sapiens]
 gi|332832229|ref|XP_003312197.1| PREDICTED: cathepsin L1 isoform 2 [Pan troglodytes]
 gi|332832233|ref|XP_001137800.2| PREDICTED: cathepsin L1 isoform 1 [Pan troglodytes]
 gi|397470218|ref|XP_003806728.1| PREDICTED: cathepsin L1 isoform 1 [Pan paniscus]
 gi|397470220|ref|XP_003806729.1| PREDICTED: cathepsin L1 isoform 2 [Pan paniscus]
 gi|397470222|ref|XP_003806730.1| PREDICTED: cathepsin L1 isoform 3 [Pan paniscus]
 gi|410042824|ref|XP_003951515.1| PREDICTED: cathepsin L1 [Pan troglodytes]
 gi|115741|sp|P07711.2|CATL1_HUMAN RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|29715|emb|CAA30981.1| pro-(cathepsin L) [Homo sapiens]
 gi|190418|gb|AAA66974.1| preprocathepsin L precursor [Homo sapiens]
 gi|31873292|emb|CAD97637.1| hypothetical protein [Homo sapiens]
 gi|48146223|emb|CAG33334.1| CTSL [Homo sapiens]
 gi|119583135|gb|EAW62731.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583136|gb|EAW62732.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583137|gb|EAW62733.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583138|gb|EAW62734.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|119583140|gb|EAW62736.1| cathepsin L, isoform CRA_a [Homo sapiens]
 gi|208965934|dbj|BAG72981.1| cathepsin L1 [synthetic construct]
 gi|410303006|gb|JAA30103.1| cathepsin L1 [Pan troglodytes]
 gi|410303008|gb|JAA30104.1| cathepsin L1 [Pan troglodytes]
 gi|410303010|gb|JAA30105.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 100/165 (60%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YIKDN GIDTESSYPYEA                                D +C
Sbjct: 174 MTSAFDYIKDNGGIDTESSYPYEAE-------------------------------DRSC 202

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA+  G V++   +E  L+ AV+ +GP+S+AIDASH SFQFYS GVYYE  C+
Sbjct: 203 RFDANSIGAICTGSVEVQHTEE-ALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCS 261

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL VGYGT E+  DYWLVKNSW ++WGD GYIKM+RNR
Sbjct: 262 PTFLDHGVLAVGYGT-ESTKDYWLVKNSWGSSWGDAGYIKMSRNR 305


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 100/165 (60%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YIKDN GIDTESSYPYEA                                D +C
Sbjct: 175 MTSAFDYIKDNGGIDTESSYPYEAE-------------------------------DRSC 203

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+     GA+  G V++   +E  L+ AV+ +GP+S+AIDASH SFQFYS GVYYE  C+
Sbjct: 204 RFDANSIGAICTGSVEVQHTEE-ALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCS 262

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH VL VGYGT E+  DYWLVKNSW ++WGD GYIKM+RNR
Sbjct: 263 PTFLDHGVLAVGYGT-ESTKDYWLVKNSWGSSWGDAGYIKMSRNR 306


>gi|193786743|dbj|BAG52066.1| unnamed protein product [Homo sapiens]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|15214962|gb|AAH12612.1| Cathepsin L1 [Homo sapiens]
 gi|61363426|gb|AAX42388.1| cathepsin L [synthetic construct]
 gi|123988681|gb|ABM83856.1| cathepsin L [synthetic construct]
 gi|123999196|gb|ABM87178.1| cathepsin L [synthetic construct]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|148745204|gb|AAI42984.1| Cathepsin L1 [Homo sapiens]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|334332718|ref|XP_001367502.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN GIDTE  YPY A                                D  C
Sbjct: 186 MDNAFQYVQDNGGIDTEECYPYVAQ-------------------------------DTEC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   SGA   G+VDIP  DE  L  AVAT+GP+S+ ID+++ SF+FY  GVYYEP+C+
Sbjct: 215 KYKPECSGANITGFVDIPSMDERALMEAVATVGPISVGIDSANPSFKFYQSGVYYEPDCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+QLDH VLVVGYG+    ++YW+VKNSW   WGD GYI MA+++
Sbjct: 275 SSQLDHGVLVVGYGSI-GKDEYWIVKNSWGEAWGDNGYILMAKDK 318


>gi|189525870|ref|XP_001923796.1| PREDICTED: cathepsin L1 [Danio rerio]
          Length = 335

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP+G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C 
Sbjct: 214 RYDPRFNVAKITGFVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACT 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 S-QLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 320


>gi|410256886|gb|JAA16410.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGGEWGMGGYVKMAKDR 318


>gi|395740610|ref|XP_002819972.2| PREDICTED: cathepsin L1 [Pongo abelii]
          Length = 333

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 318


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+  N GIDTE+SYPY+A+                               D++C
Sbjct: 190 MDYAFKYVIQNRGIDTEASYPYKAI-------------------------------DESC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA    +VD+  GDE  L+ AVA+IGP+S+AIDAS  SFQFYS GVY EP+C+
Sbjct: 219 EFKRNSIGATIHSFVDVKTGDESALQNAVASIGPISVAIDASQPSFQFYSSGVYNEPDCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH V  VGYGT  NG  YW VKNSW T+WG +GYI M+RN+
Sbjct: 279 TEILDHGVTAVGYGT-LNGVPYWKVKNSWGTSWGQKGYIFMSRNK 322


>gi|410042826|ref|XP_003951516.1| PREDICTED: cathepsin L1 [Pan troglodytes]
          Length = 278

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 128 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 156

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 157 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 215

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 216 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 263


>gi|410256882|gb|JAA16408.1| cathepsin L1 [Pan troglodytes]
 gi|410256884|gb|JAA16409.1| cathepsin L1 [Pan troglodytes]
          Length = 333

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGGEWGMGGYVKMAKDR 318


>gi|109940313|sp|P25975.3|CATL1_BOVIN RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|74354943|gb|AAI02313.1| CTSL2 protein [Bos taurus]
 gi|154425700|gb|AAI51426.1| Cathepsin L2 [Bos taurus]
 gi|296484466|tpg|DAA26581.1| TPA: cathepsin L2 precursor [Bos taurus]
 gi|440898893|gb|ELR50299.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 334

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY                              + +  ++C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPY------------------------------LATDTNSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|258588539|pdb|3HWN|A Chain A, Cathepsin L With Az13010160
 gi|258588540|pdb|3HWN|B Chain B, Cathepsin L With Az13010160
 gi|258588541|pdb|3HWN|C Chain C, Cathepsin L With Az13010160
 gi|258588542|pdb|3HWN|D Chain D, Cathepsin L With Az13010160
          Length = 258

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 108 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 136

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 137 KYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 195

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 196 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 243


>gi|5822035|pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L
          Length = 316

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 166 MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 194

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 195 KYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 253

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 254 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 301


>gi|157835400|pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor,
           Chagasin, In Complex With Human Cathepsin L
          Length = 221

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 71  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 100 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 158

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 159 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 206


>gi|157128512|ref|XP_001661463.1| cathepsin l [Aedes aegypti]
 gi|91992510|gb|ABE72971.1| cathepsin L [Aedes aegypti]
 gi|108872552|gb|EAT36777.1| AAEL011167-PA [Aedes aegypti]
          Length = 327

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 102/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   F+YIK N+G+DT + YPY+A ++                                C
Sbjct: 180 MTSVFKYIKTNNGVDTGAFYPYKAAVA------------------------------ATC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  A  GA D GYV +P  +E  L+ AVA IGPVS+AIDAS+ SFQ Y  G+YYEP C+
Sbjct: 210 GFNPAYVGATDTGYVLLP-ANETALQTAVANIGPVSVAIDASNPSFQQYKSGIYYEPLCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++L+H VLVVGYGT ENG DYW VKNSW TTWG++GYIKMARN+
Sbjct: 269 SSKLNHGVLVVGYGT-ENGTDYWQVKNSWGTTWGEKGYIKMARNK 312


>gi|170292465|pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|170292466|pdb|3BC3|B Chain B, Exploring Inhibitor Binding At The S Subsites Of Cathepsin
           L
 gi|261824911|pdb|3H8C|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
 gi|261824912|pdb|3H8C|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors (Compound 14)
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 205


>gi|261824899|pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824900|pdb|3H89|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824901|pdb|3H89|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824902|pdb|3H89|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824903|pdb|3H89|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824904|pdb|3H89|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 4)
 gi|261824905|pdb|3H8B|A Chain A, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824906|pdb|3H8B|B Chain B, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824907|pdb|3H8B|C Chain C, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824908|pdb|3H8B|D Chain D, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824909|pdb|3H8B|E Chain E, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|261824910|pdb|3H8B|F Chain F, A Combined Crystallographic And Molecular Dynamics Study
           Of Cathepsin-L Retro-Binding Inhibitors(Compound 9)
 gi|317455049|pdb|2XU3|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455050|pdb|2XU4|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455051|pdb|2XU5|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009432|pdb|2YJ2|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009433|pdb|2YJ8|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009434|pdb|2YJ9|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009435|pdb|2YJB|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|358009436|pdb|2YJC|A Chain A, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 205


>gi|291463491|pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463492|pdb|3IV2|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant
 gi|291463519|pdb|3K24|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
 gi|291463520|pdb|3K24|B Chain B, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant In
           Complex With Gln-Leu-Ala Peptide
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 205


>gi|313754424|pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible
           Inhibition Of Human Cathepsin L By Their Respective
           Dipeptidyl Glyoxal And Diazomethylketone Inhibitors
 gi|313754425|pdb|3OF9|A Chain A, Structural Basis For Irreversible Inhibition Of Human
           Cathepsin L By A Diazomethylketone Inhibitor
          Length = 221

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 71  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 100 KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 158

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 159 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 206


>gi|241913450|pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913451|pdb|3HHA|B Chain B, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913452|pdb|3HHA|C Chain C, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|241913453|pdb|3HHA|D Chain D, Crystal Structure Of Cathepsin L In Complex With
           Az12878478
 gi|317455045|pdb|2XU1|A Chain A, Cathepsin L With A Nitrile Inhibitor
 gi|317455046|pdb|2XU1|B Chain B, Cathepsin L With A Nitrile Inhibitor
 gi|317455047|pdb|2XU1|C Chain C, Cathepsin L With A Nitrile Inhibitor
 gi|317455048|pdb|2XU1|D Chain D, Cathepsin L With A Nitrile Inhibitor
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 205


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+  N+GIDTE+SYPY A+                               D  C
Sbjct: 177 MDDAFEYVIKNNGIDTEASYPYRAV-------------------------------DSTC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  A  GA   GYVD+ +  E  L+ AVATIGPVS+AIDASH SFQFYS GVY    C+
Sbjct: 206 KFNTADVGATISGYVDVTKDSESDLQVAVATIGPVSVAIDASHISFQFYSSGVYDPLICS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGTD    DYWLVKNSW  +WG  GYI+M RN 
Sbjct: 266 STNLDHGVLAVGYGTD-GSKDYWLVKNSWGASWGMSGYIEMVRNH 309


>gi|392873948|gb|AFM85806.1| cathepsin L [Callorhinchus milii]
          Length = 338

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 97/168 (57%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDN GID+E SYPY                              V + D  C
Sbjct: 186 MDQAFQYVKDNGGIDSEDSYPY------------------------------VGTDDTPC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VDIP G E  L  A+A +GPVS+AIDA H SFQFY  G+Y+E EC+
Sbjct: 216 HYNPQYNAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHTSFQFYQSGIYFEAECS 275

Query: 121 STQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VLVVGYG    D +G  YW+VKNSW+   G  GYI MA+++
Sbjct: 276 STDLDHGVLVVGYGVEKRDTDGKKYWIVKNSWSEKLGQNGYILMAKDK 323


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+  N GIDTE+SYPY+A+                               D++C
Sbjct: 190 MDYAFKYVIQNRGIDTEASYPYKAI-------------------------------DESC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA    +VD+  GDE  L+ AVA+IGP+S+AIDA+  SFQFYS GVY EP+C+
Sbjct: 219 EFKRNSVGATIHSFVDVKTGDESALQNAVASIGPISVAIDAAQPSFQFYSSGVYNEPDCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH V  VGYGT  NG  YW VKNSW T+WG +GYI M+RN+
Sbjct: 279 TEILDHGVTAVGYGT-LNGAPYWKVKNSWGTSWGRKGYIFMSRNK 322


>gi|384081596|ref|NP_001244902.1| cathepsin L1 isoform 2 [Homo sapiens]
 gi|10441924|gb|AAG17239.1|AF217997_1 unknown [Homo sapiens]
 gi|119583139|gb|EAW62735.1| cathepsin L, isoform CRA_b [Homo sapiens]
          Length = 151

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 1   MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 29

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 30  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 88

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 89  SEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 136


>gi|33242867|gb|AAQ01138.1| cathepsin [Branchiostoma lanceolatum]
          Length = 327

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 92/165 (55%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK N GIDTE  YPY+                                 +  C
Sbjct: 179 MDQAFKYIKTNGGIDTEECYPYKG------------------------------KDEKEC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK + SGA    +VD   GDE  L  A ATIGP+S  IDASH SFQ Y  GVY+E  C+
Sbjct: 209 DYKSSCSGATISSFVDFKAGDEEALMQAAATIGPISFGIDASHPSFQLYDHGVYHEKRCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYGT  N  DYWLVKNSW   WG EGYI M+RN+
Sbjct: 269 SKKLDHGVLVVGYGTHGN-KDYWLVKNSWGAEWGMEGYIMMSRNK 312


>gi|313103779|pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103780|pdb|3KSE|B Chain B, Unreduced Cathepsin L In Complex With Stefin A
 gi|313103781|pdb|3KSE|C Chain C, Unreduced Cathepsin L In Complex With Stefin A
          Length = 220

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + N YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SEDMDHGVLVVGYGFESTESDDNKYWLVKNSWGEEWGMGGYVKMAKDR 205


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 103/168 (61%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ +N G+D+E SYPYEA                                D  C
Sbjct: 183 MDFAFQYVLNNKGLDSEESYPYEAK-------------------------------DGTC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   + A D GYVDIP+ ++  +KA VAT+GP++IAIDASH SFQFYS G+YYEP C+
Sbjct: 212 KYKPEFAAANDTGYVDIPQLEKALMKA-VATVGPIAIAIDASHPSFQFYSSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGY   GTD N   YW+VKNSW ++WG  G+  +A+++
Sbjct: 271 SKELDHGVLVVGYGFEGTDSNKKKYWIVKNSWGSSWGMGGFFHIAKDK 318


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 97/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI +N GIDTE+SYPY+                          Q T       C
Sbjct: 183 MDYAFEYIINNKGIDTEASYPYQTA------------------------QYT-------C 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A SG     Y D+  GDE  L  AVAT  P S+AIDASH SFQFYS GVYYE  C+
Sbjct: 212 QYNPANSGGSLTSYTDVSSGDENALLNAVAT-EPTSVAIDASHNSFQFYSGGVYYESACS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VG+GT E+G DYWLVKNSW   WG  GYIKMARNR
Sbjct: 271 STQLDHGVLAVGWGT-EDGQDYWLVKNSWGADWGLAGYIKMARNR 314


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 80/165 (48%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI DN GIDTE SYPY+                                 D  C
Sbjct: 177 MDNAFKYIADNKGIDTEKSYPYKPE-------------------------------DRKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+A  GA D+ Y DI  G E  L+ AVATIGP+S+AIDASH SFQ YS GVY E  C+
Sbjct: 206 NFKKANVGATDKLYKDITSGSEDALQEAVATIGPISVAIDASHDSFQLYSGGVYNEKACS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  LDH VL VGY + +NG+DYW+VKNSW  +WG +GYI M+RN+
Sbjct: 266 TKTLDHGVLAVGYDS-KNGDDYWIVKNSWGKSWGIDGYIWMSRNK 309


>gi|344271616|ref|XP_003407633.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 80/168 (47%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPY                 L T  H              C
Sbjct: 183 MDNAFQYVQDNGGLDSEESYPY-----------------LATDTH-------------TC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SFQFY  G+YYEP C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHESFQFYKSGIYYEPGCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL+VGY   G D   N +W+VKNSW T+WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLLVGYGFEGKDSENNKFWIVKNSWGTSWGTNGYVKMAKDQ 319


>gi|380790141|gb|AFE66946.1| cathepsin L1 preproprotein [Macaca mulatta]
 gi|384939708|gb|AFI33459.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|109112057|ref|XP_001086247.1| PREDICTED: cathepsin L1-like isoform 5 [Macaca mulatta]
 gi|402897797|ref|XP_003911929.1| PREDICTED: cathepsin L1 [Papio anubis]
          Length = 333

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|75067394|sp|Q9GKL8.1|CATL1_CERAE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|11493685|gb|AAG35605.1|AF201700_1 cysteine protease [Chlorocebus aethiops]
          Length = 333

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|355753449|gb|EHH57495.1| Cathepsin L1 [Macaca fascicularis]
          Length = 333

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|426219849|ref|XP_004004130.1| PREDICTED: cathepsin L1 isoform 1 [Ovis aries]
 gi|426219851|ref|XP_004004131.1| PREDICTED: cathepsin L1 isoform 2 [Ovis aries]
          Length = 334

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/168 (49%), Positives = 102/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPY A                           T TS   +C
Sbjct: 183 MDNAFQYIKENGGLDSEESYPYLA---------------------------TDTS---SC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHASFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|326672302|ref|XP_003199633.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|157423549|gb|AAI53506.1| Im:6910535 [Danio rerio]
          Length = 335

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP+G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C 
Sbjct: 214 RYDPRFNVAKITGFVDIPKGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACT 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 S-RLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 320


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +A QYI+ N GIDTE+SYPY+A                                   C
Sbjct: 187 VKRALQYIQANGGIDTETSYPYKAK-------------------------------GQRC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK    GA   GYV +   +E  LK AVAT+GP+S+ IDAS  SFQFY  GVY +P+C+
Sbjct: 216 RYKPDGIGAKCTGYVHVKPSNEETLKKAVATLGPISVGIDASRHSFQFYQSGVYDDPDCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T LDH  L VGYGT ENG+DYWL+KNSW   WGD+GYIKM+RN+
Sbjct: 276 KTVLDHGALAVGYGT-ENGHDYWLIKNSWGLRWGDKGYIKMSRNK 319


>gi|156739289|ref|NP_001096592.1| uncharacterized protein LOC569326 precursor [Danio rerio]
 gi|156230119|gb|AAI52283.1| Im:6910535 protein [Danio rerio]
          Length = 335

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C 
Sbjct: 214 RYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACT 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 S-RLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 320


>gi|27806673|ref|NP_776457.1| cathepsin L2 precursor [Bos taurus]
 gi|1542853|emb|CAA62870.1| cathepsin L [Bos taurus]
          Length = 334

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY                              + +  ++C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPY------------------------------LATDTNSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 CKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+KDN G+D+E SYPY A                                D++C
Sbjct: 183 MNNAFQYVKDNGGLDSEESYPYHAQ-------------------------------DESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+ DIP+  E  L  AVAT GP+S+ IDASH +FQFY EG+YY+P+C+
Sbjct: 212 KYKPQDSAANDTGFFDIPQ-QEKALMVAVATKGPISVGIDASHFTFQFYHEGIYYDPDCS 270

Query: 121 STQLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLV+GYGT+        YW+VKNSW   WG +GYIKMA++R
Sbjct: 271 SEDLDHGVLVIGYGTEIGQSINKTYWIVKNSWGANWGIDGYIKMAKDR 318


>gi|441593109|ref|XP_003260582.2| PREDICTED: cathepsin L2 isoform 1 [Nomascus leucogenys]
          Length = 334

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 183 MGKAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +P G E  L  AVAT+GP+S+A+DA H SFQFY++G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVPPGKEKALMKAVATVGPISVAMDAGHSSFQFYNQGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SENLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|121104168|gb|ABM47423.1| cathepsin L [Hymeniacidon perlevis]
          Length = 164

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/154 (51%), Positives = 92/154 (59%), Gaps = 32/154 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  NHG DTESSYPYEA  S+                               C
Sbjct: 43  MDYAFRYIISNHGDDTESSYPYEARQSY-------------------------------C 71

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+ +   GA    Y +I  G E  LK+A  T+GP+S+AIDASHQSFQFY  GVY EP C+
Sbjct: 72  RFNKNNVGATPTSYRNIARGSESSLKSACGTVGPISVAIDASHQSFQFYRGGVYNEPSCS 131

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWG 154
           ST+LDH VLVVGYG +E+G DYWLVKNSW T WG
Sbjct: 132 STRLDHGVLVVGYG-NEDGRDYWLVKNSWGTNWG 164


>gi|156938919|gb|ABU97481.1| cathepsin L-like cysteine protease [Tyrophagus putrescentiae]
          Length = 333

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+  N GIDTE SYPY+A+                               D++ 
Sbjct: 186 MDQAFQYVIANKGIDTEMSYPYKAI-------------------------------DESW 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA  + YVD+  G E  L++AVAT+GP+S+ IDAS  SFQFYS GVY EP C+
Sbjct: 215 EFKKNSVGATIKSYVDVKTGSESSLQSAVATVGPISVGIDASQLSFQFYSSGVYEEPACS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T LDH V  VGYG   NG  YW VKNSW T+WG  GYI M+RN+
Sbjct: 275 TTILDHGVTAVGYGA-LNGTPYWKVKNSWGTSWGMSGYIFMSRNK 318


>gi|47522698|ref|NP_999057.1| cathepsin L1 precursor [Sus scrofa]
 gi|2499874|sp|Q28944.1|CATL1_PIG RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|1468964|dbj|BAA07140.1| porcine cathepsin L [Sus scrofa]
 gi|15027272|emb|CAC44793.1| cathepsin L [Sus scrofa]
          Length = 334

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 101/168 (60%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+DTE SYPY          L R                      ++C
Sbjct: 183 MDNAFQYVKDNGGLDTEESYPY----------LGRET--------------------NSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 TYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N + +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|291383486|ref|XP_002708337.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/167 (48%), Positives = 99/167 (59%), Gaps = 35/167 (20%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AFQY+KDN G+D+E SYPYEA                                D  CR
Sbjct: 184 DHAFQYVKDNGGLDSEDSYPYEAR-------------------------------DGLCR 212

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y   +S A D G+V IPE +E  L  AVAT+GP+++AIDASH SF FY EG+YYEP C+ 
Sbjct: 213 YSPQESVANDTGFVQIPEQEE-ALMEAVATVGPIAVAIDASHSSFLFYKEGIYYEPNCSR 271

Query: 122 TQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             LDHAVLVVGY   G + +   YWLVKNSW   WG +GY+KMA++R
Sbjct: 272 ENLDHAVLVVGYGFEGAESDNQKYWLVKNSWGKGWGMDGYMKMAKDR 318


>gi|355567871|gb|EHH24212.1| Cathepsin L1 [Macaca mulatta]
          Length = 333

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E +YPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEEAYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDR 318


>gi|28971813|dbj|BAC65418.1| cathepsin L [Pandalus borealis]
          Length = 318

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 94/162 (58%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A+ YIK N+GIDTESSYPYEA                                D  CR+ 
Sbjct: 174 AYDYIKSNNGIDTESSYPYEAQ-------------------------------DLTCRFD 202

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
            A  GA   GY DIP  DE    +AV   GPVS+ IDA H SFQ YS GVYYEP CN + 
Sbjct: 203 AAHVGATVTGYADIPYADEVTQASAVHDDGPVSVCIDAGHNSFQLYSSGVYYEPNCNPSS 262

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++HAVL VGYGT+E G+DYWL+KNSW T WG  GY+K+ RN+
Sbjct: 263 INHAVLPVGYGTEE-GSDYWLIKNSWGTGWGLSGYMKLTRNK 303


>gi|156739281|ref|NP_001096588.1| cathepsin L1-like precursor [Danio rerio]
 gi|166158351|ref|NP_001107526.1| uncharacterized protein LOC100135391 precursor [Xenopus (Silurana)
           tropicalis]
 gi|326672305|ref|XP_003199634.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|156230096|gb|AAI52237.1| MGC174155 protein [Danio rerio]
 gi|163916362|gb|AAI57707.1| LOC100135391 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C 
Sbjct: 214 RYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACT 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 S-RLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 320


>gi|156739275|ref|NP_001096585.1| cathepsin L1-like precursor [Danio rerio]
 gi|156230123|gb|AAI52285.1| MGC174857 protein [Danio rerio]
          Length = 335

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/168 (48%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+K+N G+D+E SYPY                              +   D  C
Sbjct: 184 MDQAFQYVKENKGLDSEQSYPY------------------------------LARDDLPC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    + A   G+VDIP G+E  L  AVA +GPVS+AIDASHQS QFY  G+YYE  C 
Sbjct: 214 RYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACT 273

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDHAVLVVGY   G D  GN YW+VKNSW+  WGD+GYI MA+++
Sbjct: 274 S-RLDHAVLVVGYGYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDK 320


>gi|348545637|ref|XP_003460286.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N GIDTE  YPYEA                                   C
Sbjct: 187 MDFAFKYIKYNRGIDTEEFYPYEAKNGL-------------------------------C 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYKR   GA   GY+ +   +E  LK AVAT+GP+S+ IDAS  SFQ Y  GVYY+  C 
Sbjct: 216 RYKRDSIGATCSGYIIVKRFEEQALKEAVATVGPISVTIDASRPSFQLYESGVYYDDGCG 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYGT ENG+DYWLVKNSW   WG++GYI+M+RN+
Sbjct: 276 SIFLNHAVLAVGYGT-ENGHDYWLVKNSWGLGWGEKGYIRMSRNK 319


>gi|355681656|gb|AER96815.1| Cathepsin L precursor [Mustela putorius furo]
          Length = 331

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/169 (47%), Positives = 103/169 (60%), Gaps = 37/169 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY A                                D++C
Sbjct: 183 MDYAFQYVKDNGGLDSEESYPYRAQ-------------------------------DESC 211

Query: 61  RYKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           +YK  +S A D G++DI PE  E  LK AVAT+GP+S AIDAS  +FQFY +G+YY+P+C
Sbjct: 212 KYKPEQSAANDTGFMDIHPE--EESLKLAVATVGPISAAIDASLSTFQFYHKGIYYDPDC 269

Query: 120 NSTQLDHAVLVVGYGT---DENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +S  LDH +LVVGYG+   D     YW+VKNSW T WG +GYI MA++R
Sbjct: 270 SSENLDHGILVVGYGSQGEDSEKQKYWIVKNSWGTDWGTQGYILMAKDR 318


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+D+E+SYPY A                                D +C
Sbjct: 183 MNNAFQYVKENGGLDSEASYPYVAK-------------------------------DGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+V IP   E +L  AVAT+GP+S+A+DASH SFQFY  G+Y+E +C+
Sbjct: 212 KYKPENSVANDTGFVVIP-AHEKELMKAVATVGPISVAVDASHSSFQFYKSGIYFEQDCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GT+ N N+YWL+KNSW   WG  GYIK+A++R
Sbjct: 271 SKNLDHGVLVVGYGFEGTNSNNNNYWLIKNSWGPEWGSNGYIKIAKDR 318


>gi|15593246|gb|AAL02220.1|AF410880_1 cysteine protease CP7 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K   GIDTE SYPY                               T+ D  C
Sbjct: 185 MDSAFEYVKSYGGIDTEESYPY-------------------------------TAEDGTC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK A +  V+ GY D+    E  L+ AV  +GPVS+AIDAS+ SFQ Y+ G+YYEP C+
Sbjct: 214 LYKAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYTSGIYYEPACS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG++    ++W+VKNSW T+WG+EGYIKMARN+
Sbjct: 274 SDSLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNK 318


>gi|348531515|ref|XP_003453254.1| PREDICTED: cathepsin L2-like [Oreochromis niloticus]
          Length = 333

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 99/165 (60%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQYI+ N G+DTE SYPY+A                  ICH   N V         
Sbjct: 187 MNPAFQYIRYNGGLDTEDSYPYKAKDG---------------ICHYNPNSV--------- 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                  GA+  G+VD+   DE  LK AVATIGP+SIA+DASH+SFQ Y  GVY E  CN
Sbjct: 223 -------GAICSGHVDVSP-DEAALKQAVATIGPISIAVDASHESFQLYQSGVYDEHRCN 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              + HA+LVVGYGT E G+DYWL+KNSW   WGD+GYIKM RN+
Sbjct: 275 KKHVTHAMLVVGYGT-EGGHDYWLIKNSWGLQWGDKGYIKMTRNK 318


>gi|351694995|gb|EHA97913.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 99/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N G+++E SYPYE                                 D +C
Sbjct: 128 MDFAFEYVKENKGLESEKSYPYEGK-------------------------------DGSC 156

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK   S A D G+VDIP+  E  L  AVA  GP+S+A+DA   SFQFY +G+Y++PEC+
Sbjct: 157 RYKPELSAANDTGFVDIPQ-REKALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFDPECS 215

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGYG    D   N+YWLVKNSW   WG EGYIK+ARNR
Sbjct: 216 SKDLNHGVLVVGYGYEEVDTEKNEYWLVKNSWGPEWGAEGYIKIARNR 263


>gi|197258086|gb|ACH56227.1| cathepsin S-like cysteine proteinase [Radopholus similis]
          Length = 314

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 96/166 (57%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI++N GIDTE SYPY     +                               C
Sbjct: 163 MDVAFDYIEENGGIDTERSYPYRGYEQY------------------------------RC 192

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y +   GA    YVD+P GDE +LK AVAT GP+S+AIDAS  SFQ Y  GVY + +C 
Sbjct: 193 KYSKRNVGATMASYVDLPSGDEQELKIAVATQGPISVAIDASSDSFQLYESGVYKDKQCG 252

Query: 121 S--TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  + LDH VL+VGYGTD    DYW+VKNSW+  WG++GYI+MARN
Sbjct: 253 NRRSNLDHGVLLVGYGTDPKHGDYWIVKNSWSAAWGEKGYIRMARN 298


>gi|15593255|gb|AAL02223.1|AF410883_1 cysteine protease CP19 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 30/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K N GIDTE SYPY A+                                D+C
Sbjct: 185 MDSAFEYVKSNGGIDTEESYPYTAV------------------------------DGDSC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+ A +  V+ GY D+    E  L+ AV  +GPVS+AIDAS+ SFQ YS G+YYE  C+
Sbjct: 215 LYRAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDASNWSFQMYSSGIYYESACS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG++    ++W+VKNSW T+WG+EGYIKMARN+
Sbjct: 275 SDYLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNK 319


>gi|18308182|gb|AAL67857.1|AF462309_1 cysteine proteinase [Acanthamoeba healyi]
          Length = 330

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI +N GIDTE+SYPY+                              T+G   C
Sbjct: 183 MDYAFEYIINNRGIDTEASYPYQ------------------------------TAGPLTC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A  G    GY D+  GDE  L  A A   PVS+AIDASH SFQFYS GVYYE  C+
Sbjct: 213 QYNAANKGGSLTGYTDVTSGDENALLNA-AVKEPVSVAIDASHNSFQFYSGGVYYESACS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VLVVG+G+ ENG D+W VKNSW  +WG  GYIKM+RN+
Sbjct: 272 STQLDHGVLVVGWGS-ENGQDFWWVKNSWGASWGLNGYIKMSRNQ 315


>gi|75060921|sp|Q5E998.1|CATL2_BOVIN RecName: Full=Cathepsin L2; Flags: Precursor
 gi|59858409|gb|AAX09039.1| cathepsin L2 preproprotein [Bos taurus]
          Length = 334

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 100/168 (59%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN  +D+E SYPY                              + +  ++C
Sbjct: 183 MDNAFQYIKDNGCLDSEESYPY------------------------------LATDTNSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQ 319


>gi|395856029|ref|XP_003800445.1| PREDICTED: cathepsin S [Otolemur garnettii]
          Length = 331

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 98/165 (59%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D+ C
Sbjct: 185 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DEKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA+ GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 214 QYDSKNRAATCSKYTELPFGSEEALKEAVASKGPVSVAIDASHSSFFLYRSGVYYEPACT 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++H VLVVGYG + NGNDYWLVKNSW   +GD+GYI+MARNR
Sbjct: 274 QV-VNHGVLVVGYG-NLNGNDYWLVKNSWGLYFGDKGYIRMARNR 316


>gi|348531521|ref|XP_003453257.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 101/165 (61%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+   GIDTE+SYPYEA                                + NC
Sbjct: 187 MDWAFKYIQATGGIDTEASYPYEAE-------------------------------EGNC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA   GYVD+   +E  LK AVATIGP+SIA+DASH+SFQFY  GVY EP C 
Sbjct: 216 HYNPETVGATCTGYVDVSP-NEDALKEAVATIGPISIAMDASHESFQFYQSGVYDEPSCI 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +++  HA+L VGYGT ENG+DYWLVKNS+   WG++GYIKM+RN+
Sbjct: 275 TSRFSHAMLAVGYGT-ENGHDYWLVKNSFGLGWGEKGYIKMSRNK 318


>gi|91092022|ref|XP_970951.1| PREDICTED: similar to cathepsin l [Tribolium castaneum]
 gi|270001246|gb|EEZ97693.1| cathepsin L precursor [Tribolium castaneum]
          Length = 343

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 102/166 (61%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ A++Y++ N GIDTE SYPYEA                                +  C
Sbjct: 193 MNPAYEYVRTNPGIDTEDSYPYEAR-------------------------------NGPC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++    GA   GYVDI EGDE  L+AA+AT+GPVS A+DA  QSFQFYS+G+YY+P+C 
Sbjct: 222 RFRPETVGAYCTGYVDIAEGDEQGLEAAIATLGPVSAAMDAGRQSFQFYSDGIYYDPQCG 281

Query: 121 STQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +    ++HAVLVVGYGT+ NG  YWLVKNS+   WG  GY+K+A++
Sbjct: 282 NRPDDVNHAVLVVGYGTEPNGQKYWLVKNSYGPQWGIGGYVKLAKD 327


>gi|348531513|ref|XP_003453253.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 333

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIKDN GI TE+SYPY+AM                               D  C
Sbjct: 187 MNNAFKYIKDNGGIQTEASYPYQAM-------------------------------DGLC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA+  GYVD+   DE  LK AVATIGP+SIA+DASH+SFQ Y  GVY E  CN
Sbjct: 216 HYNPNSVGAICNGYVDVSP-DEEALKEAVATIGPISIAMDASHESFQLYQSGVYDEHRCN 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L H +LVVGYGT E G DYWL+KNSW   WG  GYIKM RN+
Sbjct: 275 DYYLSHGMLVVGYGT-EGGLDYWLIKNSWGLGWGKMGYIKMVRNK 318


>gi|74927078|sp|Q86GF7.1|CRUST_PANBO RecName: Full=Crustapain; AltName: Full=NsCys; Flags: Precursor
 gi|28971811|dbj|BAC65417.1| crustapain [Pandalus borealis]
          Length = 323

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 91/163 (55%), Gaps = 31/163 (19%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QA+QYI  N GIDTESSYPY+A+                               DDNCRY
Sbjct: 177 QAYQYIIANRGIDTESSYPYKAI-------------------------------DDNCRY 205

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
                GA    YV+   GDE  L+ AV   GPVS+ IDA   SF  Y  GVYYEP C+S 
Sbjct: 206 DAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSW 265

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +HAV  VGYGTD NG DYW+VKNSW   WG+ GYIKMARNR
Sbjct: 266 YANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNR 308


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 99/165 (60%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GIDTESSYPY                                    +C
Sbjct: 181 MDNAFRYIESNGGIDTESSYPYLGQ-------------------------------QGSC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  +  GA   GY DIP+G E  L++AVAT+GPVS+A+DAS   +QFYS GVY  P C+
Sbjct: 210 HFSSSHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDASQ--WQFYSSGVYDNPYCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VLV+GYG + NG DYWLVKNSW  +WG EGYI M+RN+
Sbjct: 268 STQLDHGVLVIGYG-NYNGQDYWLVKNSWGYSWGVEGYIMMSRNK 311


>gi|334332714|ref|XP_001367224.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++DN GIDTE  YPY A                                D+ C
Sbjct: 186 MGNAFQYVQDNGGIDTEECYPYVAQ-------------------------------DNEC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   SGA   G+V IP  DE  L  AVA +GP+S+AIDA + SF+FY  GVYY+P+C+
Sbjct: 215 KYQPECSGANVTGFVKIPSTDERALMKAVANVGPISVAIDAGNPSFKFYQSGVYYDPQCS 274

Query: 121 STQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S+QL+H VLVVGYG++ +NG  YW+VKNSW   WGD GY+ MA++
Sbjct: 275 SSQLNHGVLVVGYGSEGKNGRKYWIVKNSWGENWGDNGYVLMAKD 319


>gi|307175098|gb|EFN65240.1| Cathepsin L [Camponotus floridanus]
          Length = 319

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 95/165 (57%), Gaps = 52/165 (31%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK+N G+DTE SYPYEA                                +D C
Sbjct: 192 MDYAFRYIKENKGLDTEKSYPYEAE-------------------------------NDQC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D G+VDIPEGDE KLKAAVATIGP+S+AIDASH+SFQFYSEG  Y   CN
Sbjct: 221 RYNPKNSGASDVGFVDIPEGDEDKLKAAVATIGPISVAIDASHESFQFYSEGTCY--TCN 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
                               DYWLVKNSW  TWG++GYIKMARN+
Sbjct: 279 I-------------------DYWLVKNSWGETWGEKGYIKMARNK 304



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 38/40 (95%)

Query: 194 DYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           DYWLVKNSW  TWG++GYIKMARN++N+CG+ASSAS+PLV
Sbjct: 280 DYWLVKNSWGETWGEKGYIKMARNKKNHCGIASSASYPLV 319


>gi|431897851|gb|ELK06685.1| Cathepsin L1 [Pteropus alecto]
          Length = 331

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/168 (47%), Positives = 101/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY A                                D++C
Sbjct: 181 MDNAFQYVKDNGGLDSEESYPYLAR-------------------------------DESC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDI +  E  L  AVA++GP+S+ IDAS+ SFQFY +G+YYEPEC+
Sbjct: 210 KYKPEFSAANDSGFVDIHK-QERSLMKAVASVGPISVGIDASYSSFQFYEKGIYYEPECS 268

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGYG    + N N YW+VKNSW T WG  GYI MA+++
Sbjct: 269 SEDLNHGVLVVGYGFERAESNKNKYWIVKNSWGTNWGMNGYINMAKDQ 316


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 95/165 (57%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK   G++ E  YPY                               T+    C
Sbjct: 212 MDNAFEYIKSIGGLEGEDDYPY-------------------------------TAKQGKC 240

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K++   A D G  D+  GDE  LK A+A++GP+S+AIDASH SFQ Y  GVY E EC+
Sbjct: 241 HLKKSLFKANDTGCTDVESGDEDALKDALASVGPISVAIDASHASFQSYDGGVYDEEECS 300

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT+ENG DYWLVKNSW   WG+EGYIKM+RN+
Sbjct: 301 SQNLDHGVLTVGYGTEENGGDYWLVKNSWGEMWGEEGYIKMSRNK 345


>gi|383410403|gb|AFH28415.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 101/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN G+D+E SYPYEA                                +++C
Sbjct: 183 MDYAFQYVADNGGLDSEESYPYEAT-------------------------------EESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 212 KYNPEYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCS 270

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGYG   T+ + + YWL KNSW   WG  GYIKMA++R
Sbjct: 271 SEDMDHGVLVVGYGFESTESDNSKYWLGKNSWGEEWGMGGYIKMAKDR 318


>gi|28194647|gb|AAO33585.1|AF479267_1 cathepsin L [Mesocricetus auratus]
          Length = 333

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 99/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ +N G+D+E SYPYEA                                D  C
Sbjct: 183 MDFAFQYVLNNKGLDSEESYPYEAK-------------------------------DGTC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   + A D GYVDIP+  E  L  AVAT+GP+++AIDASH SFQFYS G+Y+EP C+
Sbjct: 212 KYKPEFAAANDTGYVDIPQ-LEKALMKAVATVGPIAVAIDASHPSFQFYSSGIYFEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLV+GY   GTD N   YW+VKNSW T WG  G+  +A+++
Sbjct: 271 SKDLDHGVLVIGYGFEGTDSNKKKYWIVKNSWGTGWGMGGFFHIAKDK 318


>gi|334332720|ref|XP_001367595.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 333

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 99/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N GIDTE +YPY                                  D+ C
Sbjct: 186 MDNAFEYVKNNGGIDTEQAYPYLGQ-------------------------------DNEC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   SGA   G+VDIP  +E  L  AVA +GP+S+AIDA + SFQFY  GVYYEP+C+
Sbjct: 215 KYRAECSGANVTGFVDIPSMNERALMKAVANVGPISVAIDAGNPSFQFYESGVYYEPQCS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+QLDH VLVVGYG+    ++YW+VKNSW   WG +GY+ MA+ R
Sbjct: 275 SSQLDHGVLVVGYGSI-GKDEYWIVKNSWGEEWGKKGYVLMAKFR 318


>gi|340368360|ref|XP_003382720.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 326

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 94/165 (56%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y++   G +TE  YPY                               T+ D  C
Sbjct: 176 MDNAFRYLETVSGDETEMMYPY-------------------------------TAEDGFC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +++  +      GY DIP  DE  L+ AVAT+GP+S+AIDA H SFQ Y EGVYY P C+
Sbjct: 205 KFRSTEGKVKCEGYKDIPRDDEDALREAVATVGPISVAIDAGHSSFQLYKEGVYYNPTCS 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VL VGYGT E   +YWLVKNSW  +WG EGYI M+RNR
Sbjct: 265 STKLDHGVLAVGYGTYEGSEEYWLVKNSWGPSWGMEGYIMMSRNR 309


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D+NC
Sbjct: 191 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDENC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFY +GVYY+  CN
Sbjct: 220 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCN 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 280 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 323


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D+NC
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDENC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFY +GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|308322281|gb|ADO28278.1| cathepsin L [Ictalurus furcatus]
          Length = 359

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+ TE SYPYEA                                D +C
Sbjct: 185 MNWAFEYVKENGGLHTEESYPYEAK-------------------------------DGSC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R      G    G+V I   DE  L+ AVATIGP+S+AIDA+H SFQ Y  G+Y EP+C+
Sbjct: 214 RDNLGTVGVTCTGHVQINSEDENALQEAVATIGPISVAIDANHTSFQLYESGLYDEPDCS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T ++H VL VGYGTD+ G DYWL+KNSW   WGD+GYIKM+RN+
Sbjct: 274 CTDMNHGVLAVGYGTDD-GKDYWLIKNSWGINWGDKGYIKMSRNK 317


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D+NC
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDENC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + G  +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGKKHWIIKNSWGENWGNKGYILMARNK 315


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D+NC
Sbjct: 187 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDENC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFY +GVYY+  CN
Sbjct: 216 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCN 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 276 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 319


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D+NC
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDENC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFY +GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 315


>gi|340368358|ref|XP_003382719.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 329

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y++   G  TE +YPY A +                                 C
Sbjct: 180 MDNAFRYLETVAGDMTEEAYPYLAEVG-------------------------------TC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +++   +  Y DIPEGDE  L+ AVATIGP+S++I++ H SFQ Y +GVYYEP C+
Sbjct: 209 RYNSSEAKVKNTVYKDIPEGDEDALQEAVATIGPISVSINSEHSSFQLYDQGVYYEPTCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VLV+GYGT +N NDYWLVKNSW T WG +GYI M+RN+
Sbjct: 269 SSKLDHGVLVIGYGTSDN-NDYWLVKNSWGTNWGMDGYIMMSRNK 312


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 315


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 315


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 315


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 236 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 264

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 265 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCN 324

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 325 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 368


>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
          Length = 897

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 750 MTNAFQYVQRNRGIDSEDAYPY-------------------------------VGQDESC 778

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 779 MYNPTGKAAKCRGYKEIPEGNEKALKKAVARVGPISVAIDASLSSFQFYSKGVYYDENCN 838

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + G  +W++KNSW   WG++GYI MARN+
Sbjct: 839 SDNLNHAVLAVGYGI-QKGKKHWIIKNSWGENWGNKGYILMARNK 882


>gi|297684916|ref|XP_002820055.1| PREDICTED: cathepsin L2 isoform 3 [Pongo abelii]
          Length = 345

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 99/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 194 MDKAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  I  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 223 KYRPENSVANDTGFTVILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 282

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   +D   YWLVKNSW   WG  GY+K+A+++
Sbjct: 283 SKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDK 330


>gi|297684914|ref|XP_002820054.1| PREDICTED: cathepsin L2 isoform 2 [Pongo abelii]
          Length = 334

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 99/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 183 MDKAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  I  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVILPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   +D   YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 196 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 225 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 285 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 328


>gi|15593249|gb|AAL02221.1|AF410881_1 cysteine protease CP10 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 30/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y++ N GIDTE SYPY A+                                D+C
Sbjct: 185 MDSAFEYVESNGGIDTEESYPYTAV------------------------------DGDSC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK A +  V+ GY D+    E  L+ AV   GPVS+AIDAS+ SFQ YS G+YYE  C+
Sbjct: 215 LYKAANNAGVNTGYKDVQAKSESALRDAVEKAGPVSVAIDASNWSFQMYSSGIYYESACS 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYG++    ++W+VKNSW T+WG+EGYIKMARN+
Sbjct: 275 SDYLDHGVLAVGYGSEWPNKEFWIVKNSWGTSWGEEGYIKMARNK 319


>gi|293342577|ref|XP_001065834.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354413|ref|XP_573976.3| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039745|gb|EDL93861.1| rCG24317, isoform CRA_a [Rattus norvegicus]
          Length = 330

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/163 (47%), Positives = 96/163 (58%), Gaps = 32/163 (19%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AFQY+KDN G+DT  SYPYEA+                               +  CR
Sbjct: 184 DFAFQYVKDNGGLDTSVSYPYEAL-------------------------------NGTCR 212

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y    S A   G++ IP   E  L  AVAT+GP+S+ ID  H+SFQFY  G+YYEP+C+S
Sbjct: 213 YNPKYSAAKVVGFMSIPP-SENALMKAVATVGPISVGIDIKHKSFQFYKGGMYYEPDCSS 271

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           T L+HAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++
Sbjct: 272 TNLNHAVLVVGYGEESDGRKYWLVKNSWGRDWGMDGYIKMAKD 314


>gi|432117576|gb|ELK37815.1| Cathepsin L1 [Myotis davidii]
          Length = 299

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 119/244 (48%), Gaps = 83/244 (34%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+DTE SYPY                                  DD C
Sbjct: 128 MDNAFQYVKDNEGLDTEESYPYYGT-------------------------------DDTC 156

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV------- 113
           +YK   S A D G+VDI + DE  L  AVA++GP+S+A+DAS +SFQFY +G        
Sbjct: 157 KYKPEFSAANDTGFVDIHK-DERSLMKAVASVGPISVALDASLESFQFYEKGKVTVSSYL 215

Query: 114 -YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             + P   S  L                                         +YY+P+C
Sbjct: 216 EIFTPAMTSVFLG----------------------------------------IYYDPDC 235

Query: 173 NSTQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSAS 229
           +S  L+H VLVVGYG    + + N YW+VKNSW T WG +GYIKMA++ +N+CG+AS AS
Sbjct: 236 SSEDLNHGVLVVGYGFEGVEMDNNKYWIVKNSWGTKWGMDGYIKMAKDLDNHCGIASMAS 295

Query: 230 FPLV 233
           +P V
Sbjct: 296 YPTV 299


>gi|109112413|ref|XP_001106814.1| PREDICTED: cathepsin L2 isoform 3 [Macaca mulatta]
 gi|297271422|ref|XP_002800251.1| PREDICTED: cathepsin L2 [Macaca mulatta]
          Length = 334

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+D+E SYPY AM                               D  C
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAM-------------------------------DGIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +P G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRSENSVANDTGFKVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + + N YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 201 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 229

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 230 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 289

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 290 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 333


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 196 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 225 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 285 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 328


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|426362423|ref|XP_004048364.1| PREDICTED: cathepsin L2 isoform 1 [Gorilla gorilla gorilla]
 gi|426362425|ref|XP_004048365.1| PREDICTED: cathepsin L2 isoform 2 [Gorilla gorilla gorilla]
          Length = 334

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAVDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|384941728|gb|AFI34469.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+D+E SYPY AM                               D  C
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAM-------------------------------DGIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +P G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRSENSVANDTGFEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + + N YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|75765285|pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abe854
 gi|75765286|pdb|1U9W|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abi491
 gi|75765287|pdb|1U9X|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abj688
 gi|160286063|pdb|2R6N|A Chain A, Crystal Structure Of A Pyrrolopyrimidine Inhibitor In
           Complex With Human Cathepsin K
          Length = 217

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 70  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 99  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 159 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 202


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 93/164 (56%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  N GIDTE+SYPY                               T+ D  C
Sbjct: 187 MDDAFQYIITNKGIDTEASYPY-------------------------------TAKDGTC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  A  GA    + DI  G E  L+ AVAT+GPVS+AIDAS  SFQ Y+ GVY E +C+
Sbjct: 216 KFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKNSFQLYTSGVYNEKKCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST LDH VL  GYGT  NG  YWLVKNSW ++WG  GYI M+RN
Sbjct: 276 STSLDHGVLAAGYGT-SNGTPYWLVKNSWGSSWGQAGYIWMSRN 318


>gi|315364648|pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A
           Ketoamide Warhead
          Length = 213

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 66  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------EESC 94

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 95  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 154

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 155 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 198


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|295321664|pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
 gi|295321665|pdb|3H7D|E Chain E, The Crystal Structure Of The Cathepsin K Variant M5 In
           Compl Chondroitin-4-Sulfate
          Length = 215

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 68  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------EESC 96

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 97  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG +  GN +W++KNSW   WG  GYIKMARN+
Sbjct: 157 SDNLNHAVLAVGYG-ESKGNKHWIIKNSWGENWGMGGYIKMARNK 200


>gi|2914594|pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent
           Vinyl Sulfone Inhibitor
 gi|28374044|pdb|1NL6|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374045|pdb|1NL6|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374047|pdb|1NLJ|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374048|pdb|1NLJ|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|47168617|pdb|1Q6K|A Chain A, Cathepsin K Complexed With T-butyl(1s)-1-cyclohexyl-2-
           Oxoethylcarbamate
 gi|55670045|pdb|1TU6|A Chain A, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|55670046|pdb|1TU6|B Chain B, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|62738654|pdb|1YK7|A Chain A, Cathepsin K Complexed With A Cyanopyrrolidine Inhibitor
 gi|73535690|pdb|1YK8|A Chain A, Cathepsin K Complexed With A Cyanamide-Based Inhibitor
 gi|73535721|pdb|1YT7|A Chain A, Cathepsin K Complexed With A Constrained Ketoamide
           Inhibitor
 gi|93278849|pdb|2BDL|A Chain A, Cathepsin K Complexed With A Pyrrolidine Ketoamide-Based
           Inhibitor
 gi|114793438|pdb|2ATO|A Chain A, Crystal Structure Of Human Cathepsin K In Complex With
           Myocrisin
 gi|114793448|pdb|2AUX|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|114793451|pdb|2AUZ|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|126030469|pdb|2FTD|A Chain A, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|126030470|pdb|2FTD|B Chain B, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|157830076|pdb|1ATK|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor E-64
 gi|157830085|pdb|1AU0|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Symmetric Diacylaminomethyl
           Ketone Inhibitor
 gi|157830086|pdb|1AU2|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Propanone Inhibitor
 gi|157830087|pdb|1AU3|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830088|pdb|1AU4|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830146|pdb|1AYU|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Symmetric Biscarbohydrazide
           Inhibitor
 gi|157830147|pdb|1AYV|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Thiazolhydrazide Inhibitor
 gi|157830148|pdb|1AYW|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent
           Benzyloxybenzoylcarbohydrazide Inhibitor
 gi|157830300|pdb|1BGO|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Peptidomimetic Inhibitor
 gi|197305045|pdb|3C9E|A Chain A, Crystal Structure Of The Cathepsin K : Chondroitin Sulfate
           Complex.
 gi|290560385|pdb|3KW9|A Chain A, X-Ray Structure Of Cathepsin K Covalently Bound To A
           Triazine Ligand
 gi|290560386|pdb|3KWZ|A Chain A, Cathepsin K In Complex With A Non-Selective 2-Cyano-
           Pyrimidine Inhibitor
 gi|290560387|pdb|3KX1|A Chain A, Cathepsin K In Complex With A Selective 2-Cyano-Pyrimidine
           Inhibitor
 gi|293651910|pdb|3KWB|X Chain X, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|293651911|pdb|3KWB|Y Chain Y, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|308198615|pdb|3O1G|A Chain A, Cathepsin K Covalently Bound To A 2-Cyano Pyrimidine
           Inhibitor With A Benzyl P3 Group.
 gi|327200584|pdb|3O0U|A Chain A, Cathepsin K Covalently Bound To A Cyano-Pyrimidine
           Inhibitor With Improved Selectivity Over Herg
 gi|394986262|pdb|4DMX|A Chain A, Cathepsin K Inhibitor
 gi|394986263|pdb|4DMY|A Chain A, Cathepsin K Inhibitor
 gi|394986264|pdb|4DMY|B Chain B, Cathepsin K Inhibitor
          Length = 215

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 68  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------EESC 96

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 97  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 157 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 200


>gi|50513589|pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized
           Norleucine Aldehyde
          Length = 214

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 67  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------EESC 95

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 96  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 155

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 156 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 199


>gi|119573900|gb|EAW53515.1| cathepsin K (pycnodysostosis), isoform CRA_a [Homo sapiens]
          Length = 288

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 141 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 169

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 170 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 229

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 230 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 273


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP+G+E  LK AVA +GPVS+AIDAS  SFQFYS GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 167 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 195

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 196 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 255

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 256 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 299


>gi|213512938|ref|NP_001133871.1| Cathepsin K precursor [Salmo salar]
 gi|209155648|gb|ACI34056.1| Cathepsin K precursor [Salmo salar]
 gi|223647252|gb|ACN10384.1| Cathepsin K precursor [Salmo salar]
 gi|223673129|gb|ACN12746.1| Cathepsin K precursor [Salmo salar]
          Length = 331

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+++N GIDTE +YPY                                  D  C
Sbjct: 183 MTNAFEYVEENGGIDTEEAYPYLGQ-------------------------------DGQC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +  GA  RG+ +IPEGDE+ L  AV  +GPV++ IDA+  +FQFY  GVYY+P CN
Sbjct: 212 AYNASGMGAQCRGFKEIPEGDEWALTKAVVKVGPVAVGIDATLSTFQFYQRGVYYDPNCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  +W+VKNSW+ +WG +GYI MARNR
Sbjct: 272 KDDINHAVLAVGYGQTAKGMKFWIVKNSWSESWGKQGYIMMARNR 316


>gi|349604730|gb|AEQ00199.1| Cathepsin K-like protein, partial [Equus caballus]
          Length = 219

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 72  MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------DESC 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP+G+E  LK AVA +GPVS+AIDAS  SFQFYS GVYY+  CN
Sbjct: 101 MYNPTGKAAKCRGYREIPQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCN 160

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 161 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 204


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  +GY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 212 MYNPTGKAAKCKGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 272 SDNLNHAVLAVGYGV-QKGNKHWIIKNSWGENWGNKGYILMARNK 315


>gi|93279455|pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor
          Length = 215

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 68  MTNAFQYVQRNRGIDSEDAYPYVGQ-------------------------------DESC 96

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  C+
Sbjct: 97  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCS 156

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW  +WG++GYI MARN+
Sbjct: 157 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGESWGNKGYILMARNK 200


>gi|293342579|ref|XP_001065885.2| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|293354415|ref|XP_225137.5| PREDICTED: cathepsin L1 [Rattus norvegicus]
 gi|149039747|gb|EDL93863.1| rCG24278 [Rattus norvegicus]
          Length = 330

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 101/165 (61%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+DT  SY YEA                                D  C
Sbjct: 183 MEFAFQYVKENRGLDTGESYAYEAQ-------------------------------DGLC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A   G+V +P  ++  L +AVA++GPVS+ ID+ HQSF+FYS G+YYEP+C+
Sbjct: 212 RYNPKYSAANVTGFVKVPLSED-DLMSAVASVGPVSVGIDSHHQSFRFYSGGMYYEPDCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST++DHAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA+++
Sbjct: 271 STEMDHAVLVVGYGEESDGGKYWLVKNSWGEDWGMDGYIKMAKDQ 315


>gi|355567966|gb|EHH24307.1| Cathepsin L2 [Macaca mulatta]
 gi|355753494|gb|EHH57540.1| Cathepsin L2 [Macaca fascicularis]
 gi|380790509|gb|AFE67130.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+D+E SYPY AM                               D  C
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAM-------------------------------DGIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +P G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + + N YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|402898110|ref|XP_003912074.1| PREDICTED: cathepsin L2 [Papio anubis]
          Length = 334

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+D+E SYPY AM                               D  C
Sbjct: 183 MNSAFRYVKENGGLDSEESYPYVAM-------------------------------DGIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +P G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + + N YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|114625736|ref|XP_001153919.1| PREDICTED: cathepsin L2 isoform 2 [Pan troglodytes]
 gi|114625742|ref|XP_520130.2| PREDICTED: cathepsin L2 isoform 5 [Pan troglodytes]
          Length = 334

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|297287735|ref|XP_002803218.1| PREDICTED: putative cathepsin L-like protein 6-like [Macaca
           mulatta]
          Length = 270

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 99/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +F+Y+++N G+D+E+SYPYE  +                                 C
Sbjct: 120 MDNSFRYVQENGGLDSEASYPYEGKVK-------------------------------TC 148

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D G+VDIP   E  L  AVAT+GP+S+A+DASH SFQFY +G+Y+EP C+
Sbjct: 149 RYNPKYSVANDTGFVDIPS-REKDLAKAVATVGPISVAVDASHFSFQFYKKGIYFEPRCD 207

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDHA+L VGY   G D + N YWLVKNSW   WG +GYIKMA++R
Sbjct: 208 PEGLDHAMLTVGYGYEGADSDNNKYWLVKNSWGKNWGMDGYIKMAKDR 255


>gi|397499865|ref|XP_003820654.1| PREDICTED: cathepsin L2 isoform 1 [Pan paniscus]
 gi|397499867|ref|XP_003820655.1| PREDICTED: cathepsin L2 isoform 2 [Pan paniscus]
          Length = 334

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY AM                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAM-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVTPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|443694581|gb|ELT95681.1| hypothetical protein CAPTEDRAFT_173171 [Capitella teleta]
          Length = 342

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 100/167 (59%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF Y+K N+GIDTE+ YPYE                                 DD C
Sbjct: 193 MDNAFNYVKANNGIDTEAFYPYEGH-------------------------------DDWC 221

Query: 61  RY--KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            Y       GA   G+VD+ +GDE  LK AVAT+GPVS+ IDA+H+SFQ Y  G+Y E  
Sbjct: 222 GYDGSPGHKGANCTGHVDVQQGDELALKQAVATVGPVSVGIDATHRSFQLYKSGIYDEVA 281

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+++  DHAVLVVGYG+ + G+DYWLVKNSW T+WG +GYI M+RN+
Sbjct: 282 CSNSSTDHAVLVVGYGS-QGGHDYWLVKNSWGTSWGMDGYIMMSRNK 327


>gi|226821419|gb|ACO82385.1| cathepsin K [Lutjanus argentimaculatus]
          Length = 330

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 91/165 (55%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+E +YPY                                  D  C
Sbjct: 182 MTKAFQYVADNGGIDSEEAYPY-------------------------------IGEDQPC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A  +GY +IPEG+E+ L  A+   GPVS+ IDA+  SFQFYS+GVYY+P CN
Sbjct: 211 RYNATGMAAQCKGYKEIPEGNEHALAVALFKAGPVSVGIDATLSSFQFYSKGVYYDPSCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  YW+VKNSW  +WG  GYI MARNR
Sbjct: 271 KEDINHAVLAVGYGVTGKGKKYWIVKNSWGESWGKGGYILMARNR 315


>gi|291383484|ref|XP_002708316.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 333

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 98/167 (58%), Gaps = 35/167 (20%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AFQY+KDN G+D+E SYPYEA    LP                             CR
Sbjct: 184 DHAFQYVKDNGGLDSEDSYPYEARN--LP-----------------------------CR 212

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y   KS A   G+V IP   E  L  AVAT+GP+++AIDA H SFQFY EG+YYEP C+S
Sbjct: 213 YDPQKSVANGTGFVRIPR-QENALMEAVATVGPIAVAIDAGHPSFQFYKEGIYYEPNCSS 271

Query: 122 TQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              +HAVLVVGY   G + + N YWLVKNSW   WG+ GYI++A++R
Sbjct: 272 KHHNHAVLVVGYGYEGAESDSNKYWLVKNSWGKRWGEAGYIRIAKDR 318


>gi|291234299|ref|XP_002737086.1| PREDICTED: cathepsin L-like [Saccoglossus kowalevskii]
          Length = 808

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/148 (51%), Positives = 93/148 (62%), Gaps = 32/148 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+Y+K N+GID+E SYPYE +                               D +C
Sbjct: 659 MDQAFEYVKVNNGIDSEESYPYEGV-------------------------------DGDC 687

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K +   A   GY D+  G E  L+ AVA++GPVS+AIDASHQSFQFYS GVY EPEC+
Sbjct: 688 RFKASDVAATCTGYTDVESGSESALQQAVASVGPVSVAIDASHQSFQFYSSGVYIEPECS 747

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNS 148
           ST+LDH VL VGYGT E+ +DYWLVKNS
Sbjct: 748 STELDHGVLTVGYGT-EDSSDYWLVKNS 774


>gi|281346354|gb|EFB21938.1| hypothetical protein PANDA_009085 [Ailuropoda melanoleuca]
          Length = 333

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+KDN G+D+E SYPY A                                D  C
Sbjct: 183 MDNAFRYVKDNGGLDSEESYPYLAQ-------------------------------DGRC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK  +S A D G+ DI + DE  L  +VAT+GP+S+AIDAS  +F+FY +G+YY+P C+
Sbjct: 212 KYKPEQSAANDTGFADIHQ-DEESLMLSVATVGPISVAIDASLDTFRFYYKGIYYDPNCS 270

Query: 121 STQLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+DE      +YW+VKNSW T WG +GYI MA++R
Sbjct: 271 SEDLDHGVLVVGYGSDEREAENKNYWIVKNSWGTQWGMQGYILMAKDR 318


>gi|149755237|ref|XP_001495795.1| PREDICTED: cathepsin L1-like [Equus caballus]
          Length = 339

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/167 (47%), Positives = 101/167 (60%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY A   F                               C
Sbjct: 183 MDYAFQYVKDNGGLDSEKSYPYLAEDGF-------------------------------C 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G++DI + +++ L  AVAT+GP+S  IDAS +SFQFY EG+YY+P+C+
Sbjct: 212 KYKPEYSAANDTGFLDIQQQEKF-LMEAVATVGPISAGIDASLESFQFYKEGIYYDPDCS 270

Query: 121 STQLDHAVLVVGYGTD--ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +  ++ N YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SKYLDHGVLVVGYGFEGKDSRNKYWLVKNSWGEDWGMNGYIKMAKDR 317


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+KDN G+D+E SYPY A                                D  C
Sbjct: 183 MDNAFRYVKDNGGLDSEESYPYLAQ-------------------------------DGRC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK  +S A D G+ DI + DE  L  +VAT+GP+S+AIDAS  +F+FY +G+YY+P C+
Sbjct: 212 KYKPEQSAANDTGFADIHQ-DEESLMLSVATVGPISVAIDASLDTFRFYYKGIYYDPNCS 270

Query: 121 STQLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG+DE      +YW+VKNSW T WG +GYI MA++R
Sbjct: 271 SEDLDHGVLVVGYGSDEREAENKNYWIVKNSWGTQWGMQGYILMAKDR 318



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 4/107 (3%)

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R +   S A   G V++P+ +E  +  AVA  GPVS AI AS  SFQF  EG+YY+P C+
Sbjct: 384 RTRPECSAADVTGPVNVPQQEE-AVMLAVAAGGPVSAAIRASLGSFQFCKEGIYYDPNCS 442

Query: 121 STQLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VLVVGYG+DE      +YW+VKNSW T WG +GY+ + R+
Sbjct: 443 SEDLDHGVLVVGYGSDEREAENKNYWIVKNSWGTDWGLQGYMLLVRD 489



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 54/80 (67%), Gaps = 5/80 (6%)

Query: 157 GYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIK 213
           G  +  +  +YY+P C+S  LDH VLVVGYG+DE      +YW+VKNSW T WG +GY+ 
Sbjct: 426 GSFQFCKEGIYYDPNCSSEDLDHGVLVVGYGSDEREAENKNYWIVKNSWGTDWGLQGYML 485

Query: 214 MARNRENNCGVASSASFPLV 233
           + R+ +N+C +  + SFP+V
Sbjct: 486 LVRDWDNHCEI--TTSFPVV 503


>gi|281200606|gb|EFA74824.1| cysteine proteinase 5 precursor [Polysphondylium pallidum PN500]
          Length = 307

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/173 (47%), Positives = 96/173 (55%), Gaps = 39/173 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI  N+GIDTESSYPY+A                                   C
Sbjct: 151 MTAAFEYIIKNNGIDTESSYPYKA------------------------------EDGKKC 180

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A S A    YV++  G E  L A  + +GPVS+AIDASH SFQ YS GVYYEP+C+
Sbjct: 181 LYNPANSAATLSSYVNVTTGSESDL-AVKSGLGPVSVAIDASHNSFQLYSSGVYYEPKCS 239

Query: 121 STQLDHAVLVVGYGTD--------ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            TQLDH VLVVGYG+D            D+W+VKNSW TTWG EGYI M+RNR
Sbjct: 240 QTQLDHGVLVVGYGSDALPSAGVSAGSGDWWIVKNSWGTTWGVEGYIYMSRNR 292


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|146386731|pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor
           Bound To Cathepsin K
          Length = 215

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 68  MTNAFQYVQRNRGIDSEDAYPYVGQ-------------------------------DESC 96

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS GVYY+  C+
Sbjct: 97  MYNPTGKAAKCRGYREIPEGNEAALKRAVAAVGPVSVAIDASLTSFQFYSAGVYYDENCS 156

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW  +WG+ GYI MARN+
Sbjct: 157 SDALNHAVLAVGYGI-QAGNKHWIIKNSWGESWGNAGYILMARNK 200


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTNAFQYVQRNRGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  C+
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVL VGYG  + GN +W++KNSW  +WG++GYI MARN+
Sbjct: 271 SDNVNHAVLAVGYGI-QKGNKHWIIKNSWGESWGNKGYILMARNK 314


>gi|356582227|ref|NP_001239115.1| cathepsin L1 precursor [Canis lupus familiaris]
 gi|62899810|sp|Q9GL24.1|CATL1_CANFA RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|10185020|emb|CAC08809.1| cathepsin L [Canis lupus familiaris]
          Length = 333

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+KDN G+D+E SYPY                              +    + C
Sbjct: 183 MDNAFRYVKDNGGLDSEESYPY------------------------------LGRDTETC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VD+P+  E  L  AVAT+GP+S+AIDA HQSFQFY  G+Y++P+C+
Sbjct: 213 NYKPECSAANDTGFVDLPQ-REKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   GTD N N +W+VKNSW   WG  GY+KMA+++
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSN-NKFWIVKNSWGPEWGWNGYVKMAKDQ 318


>gi|146386366|gb|ABQ23971.1| cathepsin K [Oryctolagus cuniculus]
          Length = 183

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 98/165 (59%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 47  MTNAFQYVQRNRGIDSEDAYPYVGQ-------------------------------DESC 75

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  C+
Sbjct: 76  MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCS 135

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVL VGYG  + GN +W++KNSW  +WG++GYI MARN+
Sbjct: 136 SDNVNHAVLAVGYGI-QKGNKHWIIKNSWGESWGNKGYILMARNK 179


>gi|449679414|ref|XP_002161570.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 353

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 99/166 (59%), Gaps = 33/166 (19%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           + AF+YIKDN G+D+E+ YPY+A          + L Y                    C 
Sbjct: 204 NNAFEYIKDNDGLDSENGYPYDA----------KELGY--------------------CY 233

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y      A D G+V+IP GDE  LK AVAT+GP+++ IDAS  SFQ Y  GVY EP C +
Sbjct: 234 YDEKYKEASDSGFVEIPYGDEDALKEAVATVGPIAVNIDASKPSFQSYKSGVYNEPTCGN 293

Query: 122 --TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             T L HAVLVVGYGT E G+ +WLVKNSW  TWGD GYIKM+RN+
Sbjct: 294 GITNLTHAVLVVGYGT-EKGHKFWLVKNSWGKTWGDHGYIKMSRNK 338


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGILK-GNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|225707912|gb|ACO09802.1| Cathepsin K precursor [Osmerus mordax]
          Length = 331

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y++DN GID+E++YPY                                  D+ C
Sbjct: 183 MTNAFNYVRDNQGIDSEAAYPY-------------------------------IGQDETC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  RGY +IPEG+E  L  AVA +GPVS+ IDA+  +FQFY +GVYY+  CN
Sbjct: 212 AYNVSGMTASCRGYKEIPEGNERALTVAVAKVGPVSVGIDATLSTFQFYQKGVYYDRNCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  YW+VKNSW+ +WG++GYI MARNR
Sbjct: 272 KDDINHAVLAVGYGVTPKGKKYWIVKNSWSESWGNKGYILMARNR 316


>gi|348525618|ref|XP_003450319.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 330

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 97/164 (59%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DNHGID+++SYPY                               T  D+ C
Sbjct: 184 MTRAFQYVIDNHGIDSDASYPY-------------------------------TGRDEQC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A   A    Y  +PEGDE  LK A+ATIGP+S+AIDA    F FY  GVY +P C 
Sbjct: 213 RYNPATRAANCSSYQFLPEGDENALKQALATIGPISVAIDARRPRFSFYRSGVYNDPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +++H VL VGYG+  NG DYWLVKNSW +T+GD+GYI+MARN
Sbjct: 272 TQEVNHGVLAVGYGS-LNGQDYWLVKNSWGSTFGDQGYIRMARN 314


>gi|225719058|gb|ACO15375.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 326

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 77/166 (46%), Positives = 96/166 (57%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y   N GI  E SYPY                               T+ D++C
Sbjct: 177 MDNAFKYFIANKGIANEKSYPY-------------------------------TAKDNDC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK++ S A    + D+   DE +LK AVA +GPVS+AIDAS   FQFY  GVYY+  C+
Sbjct: 206 KYKKSMSVATISSFKDVKHKDEDQLKMAVANVGPVSVAIDASSSKFQFYESGVYYDENCS 265

Query: 121 STQLDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGTD ++G D+WLVKNSW  +WG  GYIKMARN+
Sbjct: 266 SEVLDHGVLAVGYGTDKKSGMDFWLVKNSWAASWGLNGYIKMARNK 311


>gi|189053498|dbj|BAG35664.1| unnamed protein product [Homo sapiens]
          Length = 334

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY A+                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAV-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+ IDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVGIDASLTSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNVNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|334332716|ref|XP_001367365.2| PREDICTED: cathepsin L1-like [Monodelphis domestica]
          Length = 335

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY++DN GIDTE  YPY   +                               + C
Sbjct: 186 MDRAFQYVQDNGGIDTEECYPYVGEV-------------------------------NEC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   SGA   G+VDIP  DE  L  AVAT+GP+S+AID  + SF+FY  GVYY+P+C+
Sbjct: 215 KYQPECSGANVVGFVDIPSMDERALMEAVATVGPISVAIDGGNPSFKFYESGVYYDPQCS 274

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S+QL+HA LVVGYG++  +G  YW+VKNSW   WG+ GYI MA++
Sbjct: 275 SSQLNHAGLVVGYGSEGIDGRKYWIVKNSWGELWGNNGYILMAKD 319


>gi|23110960|ref|NP_001324.2| cathepsin L2 preproprotein [Homo sapiens]
 gi|320118898|ref|NP_001188504.1| cathepsin L2 preproprotein [Homo sapiens]
 gi|12644075|sp|O60911.2|CATL2_HUMAN RecName: Full=Cathepsin L2; AltName: Full=Cathepsin U; AltName:
           Full=Cathepsin V; Flags: Precursor
 gi|3107915|dbj|BAA25909.1| cathepsin V [Homo sapiens]
 gi|3228672|gb|AAC23598.1| cathepsin U [Homo sapiens]
 gi|3869129|dbj|BAA34365.1| cathepsin L2 [Homo sapiens]
 gi|23958123|gb|AAH23504.1| CTSL2 protein [Homo sapiens]
 gi|37182404|gb|AAQ89004.1| cathepsin L2 [Homo sapiens]
 gi|83405150|gb|AAI10513.1| Cathepsin L2 [Homo sapiens]
 gi|119579235|gb|EAW58831.1| cathepsin L2, isoform CRA_a [Homo sapiens]
 gi|119579236|gb|EAW58832.1| cathepsin L2, isoform CRA_a [Homo sapiens]
          Length = 334

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY A+                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAV-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|3087790|emb|CAA75029.1| cathepsin L2 [Homo sapiens]
          Length = 334

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY A+                               D+ C
Sbjct: 183 MARAFQYVKENGGLDSEESYPYVAV-------------------------------DEIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 212 KYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G + N + YWLVKNSW   WG  GY+K+A+++
Sbjct: 272 SKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDK 319


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 185 MTNAFQYVQKNRGIDSEDAYPY-------------------------------IGEDESC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG E  LK AVA +GPV++AIDAS  SFQFYS+GVYY+  CN
Sbjct: 214 MYNPTGKAAKCRGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCN 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + G  +W++KNSW   WG++GYI MARN+
Sbjct: 274 SDNLNHAVLAVGYGI-QRGTKHWIIKNSWGEQWGNKGYILMARNK 317


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++ N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFEYVQKNRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GPVS+AIDAS  SFQFYS GVY++  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYFDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + GN +W++KNSW   WG++GYI MARN+
Sbjct: 271 SDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARNK 314


>gi|186688053|gb|ACC86112.1| cathepsin K [Paralichthys olivaceus]
          Length = 330

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 91/165 (55%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+++N GID+E +YPY                                  D +C
Sbjct: 182 MTNAFQYVQENGGIDSEEAYPY-------------------------------VGEDQSC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +   A  +GY ++P GDE+ L  A+  +GPVS+ IDAS  SFQFY  GVYY+  CN
Sbjct: 211 RYNSSGMAAQCKGYKEVPVGDEHALAVALFKVGPVSVGIDASQSSFQFYQRGVYYDRNCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  YW++KNSW+  WG +GYI MARNR
Sbjct: 271 KDDINHAVLAVGYGISSKGKKYWIIKNSWSENWGKKGYILMARNR 315


>gi|344257452|gb|EGW13556.1| Cathepsin L1 [Cricetulus griseus]
          Length = 290

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+DT  SYPYEA                                +  C
Sbjct: 143 MEYAFRYVKENRGLDTRVSYPYEAR-------------------------------NGPC 171

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A    +V IP  ++  +KA VAT+GP+S+ +D+ H SF+FY  G+YYEP C+
Sbjct: 172 RYDPKNSAANVTDFVKIPISEDALMKA-VATVGPISVGVDSHHHSFRFYKGGMYYEPHCS 230

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDHAVLVVGYG + +GN YW+VKNSW   WG  GYIKMAR+R
Sbjct: 231 SSNLDHAVLVVGYGEESDGNKYWMVKNSWGQGWGMNGYIKMARDR 275


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN+GID+E+SYPY+AM                               +  C
Sbjct: 193 MTTAFQYIIDNNGIDSEASYPYKAM-------------------------------NGKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY   K  A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 222 RYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC- 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 281 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGDQGYIRMARN 323


>gi|354502595|ref|XP_003513369.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
          Length = 330

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+DT  SYPYEA                                +  C
Sbjct: 183 MEYAFRYVKENRGLDTRVSYPYEAR-------------------------------NGPC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A    +V IP  ++  +KA VAT+GP+S+ +D+ H SF+FY  G+YYEP C+
Sbjct: 212 RYDPKNSAANVTDFVKIPISEDALMKA-VATVGPISVGVDSHHHSFRFYKGGMYYEPHCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDHAVLVVGYG + +GN YW+VKNSW   WG  GYIKMAR+R
Sbjct: 271 SSNLDHAVLVVGYGEESDGNKYWMVKNSWGQGWGMNGYIKMARDR 315


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN+GID+E+SYPY+AM                               +  C
Sbjct: 185 MTTAFQYIIDNNGIDSEASYPYKAM-------------------------------NGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY   K  A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 214 RYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 273 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGDQGYIRMARN 315


>gi|348542778|ref|XP_003458861.1| PREDICTED: digestive cysteine proteinase 3-like [Oreochromis
           niloticus]
          Length = 218

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 96/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YIKDN GI TE SY YEA                                D  C
Sbjct: 72  MIPAFKYIKDNGGIQTEESYTYEAR-------------------------------DGRC 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     GA   GY  + + DE  LK AVA IGP+SIA+DASH+SFQ Y  GVY EP C+
Sbjct: 101 HYNANFVGAQCSGYGTVKQ-DEEALKQAVAAIGPISIAVDASHESFQLYQSGVYDEPWCS 159

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  L+HAVL VGYGT ENG+DYWLVKNSW + WG++GYIKM RN+
Sbjct: 160 NINLNHAVLAVGYGT-ENGHDYWLVKNSWGSEWGNKGYIKMTRNK 203


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N+GIDTE SYPY                               T  D  C
Sbjct: 182 MDDAFTYIKKNNGIDTEQSYPY-------------------------------TGEDGTC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K++   A   G+VD+  G E  L+ A ATIGP+S+AIDAS   FQ Y  GVY   +C+
Sbjct: 211 SFKKSDVAATVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQLYESGVYDVSDCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T+LDH VLVVGYGTD+ G  YWLVKNSW T WG  GYI+M+R +
Sbjct: 271 TTELDHGVLVVGYGTDD-GTAYWLVKNSWGTDWGHHGYIQMSRKQ 314


>gi|149510440|ref|XP_001518002.1| PREDICTED: cathepsin K-like [Ornithorhynchus anatinus]
          Length = 618

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN GID+E +YPY                                  D+ C
Sbjct: 471 MTNAFQYVHDNRGIDSEDAYPYVGQ-------------------------------DEPC 499

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A  RGY ++P GDE  LK AVA +GPV++AIDAS  SFQFYS+GVY++  CN
Sbjct: 500 RYSPTGKAAKCRGYREVPVGDEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYFDENCN 559

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L+HA+L VGYG  + G  +W++KNSW   WG++GY+ MARN+
Sbjct: 560 GANLNHALLAVGYGA-QKGAKHWIIKNSWGEEWGNKGYVLMARNK 603


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+++N GID+E +YPY                                  D++C
Sbjct: 185 MTNAFQYVQENRGIDSEDAYPY-------------------------------IGQDESC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG E  LK AVA +GPV++AIDAS  SFQFYS+GVYY+  CN
Sbjct: 214 MYNPTGKAAKCRGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCN 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L+HAVL VGYG  + G  +W++KNSW   WG++GYI MARN+
Sbjct: 274 GDNLNHAVLAVGYGI-QRGTKHWIIKNSWGEEWGNKGYILMARNK 317


>gi|74219261|dbj|BAE26764.1| unnamed protein product [Mus musculus]
          Length = 333

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 93/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+ TE SYPY                                  D  C
Sbjct: 183 MQNAFQYVKDNGGLATEESYPY-------------------------------IGPDRKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A  R +V IP G E  L  AVA +GP+S+A+DASH SFQFY  G+YYEP+C 
Sbjct: 212 RYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCK 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              L+HAVLVVGY   G + +GN YWLVKNSW   WG +GYIK+A++
Sbjct: 271 RVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKD 317


>gi|261824891|pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824892|pdb|3H6S|B Chain B, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824893|pdb|3H6S|C Chain C, Strucure Of Clitocypin - Cathepsin V Complex
 gi|261824894|pdb|3H6S|D Chain D, Strucure Of Clitocypin - Cathepsin V Complex
 gi|310942696|pdb|3KFQ|A Chain A, Unreduced Cathepsin V In Complex With Stefin A
 gi|310942697|pdb|3KFQ|B Chain B, Unreduced Cathepsin V In Complex With Stefin A
          Length = 221

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY A+                               D+ C
Sbjct: 70  MARAFQYVKENGGLDSEESYPYVAV-------------------------------DEIC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 99  KYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 158

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   +D   YWLVKNSW   WG  GY+K+A+++
Sbjct: 159 SKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDK 206


>gi|444514070|gb|ELV10520.1| Cathepsin L1 [Tupaia chinensis]
          Length = 450

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 98/167 (58%), Gaps = 40/167 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY+ M                               D  C
Sbjct: 307 MDNAFQYIKDNGGLDSEESYPYKGM-------------------------------DGTC 335

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   + A D G+       E  L  AVA++GP+S+AIDA H SFQFY +G+YYEP+C+
Sbjct: 336 QYKAEWAVANDTGF-------EKALMKAVASVGPISVAIDAGHASFQFYKDGIYYEPDCS 388

Query: 121 STQLDHAVLVVGYGTDE-NGND-YWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG ++ N ND YWL+KNSW   WG  GY+K+A++R
Sbjct: 389 SENLDHGVLVVGYGVEKRNSNDKYWLIKNSWGEQWGANGYVKIAKDR 435


>gi|348531517|ref|XP_003453255.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 33/162 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYI+DN G+DTE SY YEA                                D  CRY+
Sbjct: 187 AFQYIRDNGGVDTEKSYRYEAK-------------------------------DGQCRYR 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA   GYVD+   +E  L  AVATIGP+S++ID S  SFQ Y  GVY EP C++  
Sbjct: 216 SNSIGAKCNGYVDVSPFEE-ALMEAVATIGPISVSIDDSRVSFQLYQSGVYDEPWCSNIN 274

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HAVL VGYGT ENG+DYWLVKNSW + WG++GYIKM RN+
Sbjct: 275 LNHAVLAVGYGT-ENGHDYWLVKNSWGSGWGNKGYIKMTRNK 315


>gi|33242865|gb|AAQ01137.1| cathepsin [Branchiostoma lanceolatum]
          Length = 328

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQ F+YIKDN GIDTE  YPY+A                                ++ C
Sbjct: 182 MDQGFKYIKDNGGIDTEECYPYKAK-------------------------------NEKC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+ + SGA         EG    L+ AVAT+GP+S+AIDA H SFQ Y  GVY++  C+
Sbjct: 211 NYQASCSGATLTAKRRQDEG-RGALQQAVATVGPISVAIDAGHSSFQLYQSGVYHKFFCS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T++DH VL VGYGT+E G DYWLVKNSW  +WG++GYIKM+RNR
Sbjct: 270 ETKMDHGVLAVGYGTEE-GKDYWLVKNSWGASWGEKGYIKMSRNR 313


>gi|15826035|pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
 gi|15826036|pdb|1FH0|B Chain B, Crystal Structure Of Human Cathepsin V Complexed With An
           Irreversible Vinyl Sulfone Inhibitor
          Length = 221

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 98/168 (58%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+K+N G+D+E SYPY A+                               D+ C
Sbjct: 70  MARAFQYVKENGGLDSEESYPYVAV-------------------------------DEIC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A D G+  +  G E  L  AVAT+GP+S+A+DA H SFQFY  G+Y+EP+C+
Sbjct: 99  KYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCS 158

Query: 121 STQLDHAVLVVGYGTDENGND---YWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGYG +   +D   YWLVKNSW   WG  GY+K+A+++
Sbjct: 159 SKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDK 206


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 183 MTNAFQYVQKNRGIDSEDAYPY-------------------------------VGQDESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFY +GVYY+  CN
Sbjct: 212 MYNPTGKAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  + G  +W++KNSW   WG++GY+ MARN+
Sbjct: 272 SDNLNHAVLAVGYGI-QKGRKHWIIKNSWGENWGNKGYVLMARNK 315


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTTAFQYVQQNGGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GPVS++IDAS  SFQFYS GVYY+  C+
Sbjct: 211 MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCD 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVLVVGYGT + GN YW++KNSW  +WG++GY+ +ARN+
Sbjct: 271 RDNVNHAVLVVGYGT-QKGNKYWIIKNSWGESWGNKGYVLLARNK 314


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/168 (46%), Positives = 98/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPY A                              +   +C
Sbjct: 183 MDNAFQYVKDNGGLDSEESYPYTA------------------------------TDTQDC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D G+VDIP   E  L  AVAT+GP+S+AIDA   SFQFYS G+Y++P C 
Sbjct: 213 RYNPKYSAANDTGFVDIPP-QEKALMKAVATVGPISVAIDAGQVSFQFYSSGIYFDPACR 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T ++H VL VGY   GTD + N YWLVKNSW  +WG +GYIK+A++R
Sbjct: 272 LT-VNHGVLAVGYGFEGTDPDKNKYWLVKNSWGKSWGADGYIKIAKDR 318


>gi|350583407|ref|XP_003481511.1| PREDICTED: cathepsin S [Sus scrofa]
          Length = 331

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A+                               D  C
Sbjct: 185 MTEAFQYIIDNNGIDSEASYPYKAV-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P  DEY LK AVA  GPVS+AIDA H SF FY  GVYY+P C 
Sbjct: 214 KYDSKNRAATCSRYTELPFADEYALKEAVANKGPVSVAIDAKHSSFFFYRSGVYYDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD GYI+MARN
Sbjct: 273 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGDGGYIRMARN 315


>gi|415567|gb|AAB28289.1| cysteine proteinase=39 kda activated form [Bombyx mori=silkworms,
           eggs, Peptide, 176 aa]
          Length = 176

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 84/137 (61%), Gaps = 31/137 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIKDN GIDTE +YPYE +                               DD C
Sbjct: 70  MDNAFKYIKDNGGIDTEQAYPYEGV-------------------------------DDKC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    +GA D G+VDIPEGDE KL  AVAT+GPVS+AIDASH  FQ YS GVY E EC+
Sbjct: 99  RYNPKNTGAEDVGFVDIPEGDEQKLMEAVATVGPVSVAIDASHTHFQLYSSGVYNEEECS 158

Query: 121 STQLDHAVLVVGYGTDE 137
           ST LDH VLVVGYGTDE
Sbjct: 159 STDLDHGVLVVGYGTDE 175


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y++ N GID+E +YPY                                  D++C
Sbjct: 184 MTNAFHYVQKNQGIDSEDAYPY-------------------------------VGQDESC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEG+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 213 MYNPTGKAAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCN 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+HAVL VGYG  +    +W++KNSW  +WG++GYI MARN+
Sbjct: 273 SDNLNHAVLAVGYGIQKR-KKHWIIKNSWGESWGNKGYILMARNK 316


>gi|313235127|emb|CBY24999.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M Q F YI DN+G+DTE+SYPY                               T+ D  C
Sbjct: 179 MTQGFTYIHDNNGVDTEASYPY-------------------------------TAQDGKC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  A  G       +I  GDE  L  AV  +GP+S+AIDASH SFQ Y+ GVYYEP C+
Sbjct: 208 VFNPANVGTSLTSCYNIASGDEAALANAVQMVGPMSVAIDASHMSFQLYTSGVYYEPNCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH V  VGYG+  NGND+++VKNSW  TWGD GYI M+RN+
Sbjct: 268 SQFLDHGVTAVGYGSS-NGNDFFIVKNSWAATWGDNGYIMMSRNK 311


>gi|391226352|gb|AFM38108.1| cathepsin L [Patiria pectinifera]
          Length = 327

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 93/163 (57%), Gaps = 32/163 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+ DN GID+ESSYPY+A                                D  C
Sbjct: 180 MNGAFQYVHDNMGIDSESSYPYQA-------------------------------EDKKC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  A   A D+ +  +P  DE  L+ AVA +GP+S+AIDASH+SFQ Y +GVY EP C+
Sbjct: 209 RFNPANVVATDKTHTLLPAMDEKALQMAVAMVGPISVAIDASHESFQMYHKGVYDEPMCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH VL VGYG  E+   YWLVKNSW   WG +GYI M+R
Sbjct: 269 QTMLDHGVLAVGYGM-EDDKAYWLVKNSWGKKWGMKGYIMMSR 310


>gi|74211558|dbj|BAE26509.1| unnamed protein product [Mus musculus]
          Length = 338

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+DT  SY YEA                                D  C
Sbjct: 191 MELAFQYVKENRGLDTRESYAYEAW-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S     G+V +P  ++  L  AVA++GPVS+ ID  H SF+FY  G YYEP+C+
Sbjct: 220 RYDPKYSAVNITGFVKVPLSED-ALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDHAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++R
Sbjct: 279 STNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDR 323


>gi|330803820|ref|XP_003289900.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
 gi|325080011|gb|EGC33585.1| hypothetical protein DICPUDRAFT_80649 [Dictyostelium purpureum]
          Length = 328

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  +F+YI    G+DTE+SYPYE ++                                 C
Sbjct: 182 MTNSFEYIIAVGGLDTEASYPYEGVVG-------------------------------KC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ +A  GA   GY ++  G E  L+ AVA   PVS+AIDAS  SFQ YS GVYYEP C+
Sbjct: 211 KFNKANIGATITGYKNVKSGSESDLQTAVAA-QPVSVAIDASQNSFQLYSSGVYYEPACS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VGYG+ ++G DYW+VKNSW   WG++G+I MARN+
Sbjct: 270 STQLDHGVLAVGYGS-QSGQDYWIVKNSWGADWGEKGFILMARNK 313


>gi|148709355|gb|EDL41301.1| cDNA sequence BC051665 [Mus musculus]
          Length = 349

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+DT  SY YEA                                D  C
Sbjct: 202 MELAFQYVKENRGLDTRESYAYEAW-------------------------------DGPC 230

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S     G+V +P  ++  L  AVA++GPVS+ ID  H SF+FY  G YYEP+C+
Sbjct: 231 RYDPKYSAVNITGFVKVPLSED-ALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCS 289

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDHAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++R
Sbjct: 290 STNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDR 334


>gi|305434756|gb|ADM53740.1| cathepsin L1 precursor [Lepeophtheirus salmonis]
          Length = 325

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 94/166 (56%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+  N GI TE +YPY                               T+ D  C
Sbjct: 176 MDNAFKYLIANKGIATEDTYPY-------------------------------TATDGVC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y +  +      + D+  G E +LK AVA IGP+S+AIDAS   FQFY +GVY + EC+
Sbjct: 205 VYNKTMAAGRISSFKDVKHGSEDQLKLAVAQIGPISVAIDASSGDFQFYKKGVYVDEECS 264

Query: 121 STQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGTD+  G DYWLVKNSW+ +WGD+GYIKMARN 
Sbjct: 265 SKYLDHGVLAVGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARNH 310


>gi|30388235|gb|AAH51665.1| CDNA sequence BC051665 [Mus musculus]
          Length = 330

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+DT  SY YEA                                D  C
Sbjct: 183 MELAFQYVKENRGLDTRESYAYEAW-------------------------------DGPC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S     G+V +P  ++  L  AVA++GPVS+ ID  H SF+FY  G YYEP+C+
Sbjct: 212 RYDPKYSAVNITGFVKVPLSED-ALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDHAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++R
Sbjct: 271 STNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDR 315


>gi|33242886|gb|AAQ01147.1| cathepsin [Haplochromis chilotes]
          Length = 334

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DNHGID+++SYPY                                  DD C
Sbjct: 188 MTRAFQYVIDNHGIDSDASYPY-------------------------------IGRDDQC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A    Y  +PEGDE  LK  +AT+GP+S+AIDA    F FY  GVY +P C 
Sbjct: 217 HYNPATRAANCSSYQFLPEGDENALKQGLATVGPISVAIDARRPRFSFYRSGVYNDPSC- 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +++H VL VGYGT  NG DYWLVKNSW TT+GD+GYI+MARN
Sbjct: 276 TQKVNHGVLAVGYGT-LNGQDYWLVKNSWGTTFGDQGYIRMARN 318


>gi|355681664|gb|AER96818.1| cathepsin S [Mustela putorius furo]
          Length = 338

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E SYPY+AM                               D NC
Sbjct: 193 MTKAFQYIIDNNGIDSEVSYPYKAM-------------------------------DGNC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y ++P G E  LK AVA  GPVS+AIDA H SF  Y  GVYY+P C 
Sbjct: 222 RYDSKHRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDAKHSSFFLYKSGVYYDPSC- 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +G++GYI+MARN
Sbjct: 281 TQNVNHGVLVVGYG-NLNGRDYWLVKNSWGLNFGEQGYIRMARN 323


>gi|444515096|gb|ELV10758.1| Cathepsin S [Tupaia chinensis]
          Length = 240

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A                                D+ C
Sbjct: 94  MTRAFQYIIDNNGIDSEASYPYKAT-------------------------------DEKC 122

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y  +P G E  LK AVA  GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 123 QYNLKNRAATCSKYTLLPSGYEEALKEAVANKGPVSVAIDASHSSFFLYRSGVYYEPSCT 182

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 183 QT-VNHGVLVVGYG-NLNGKDYWLVKNSWGLPFGDKGYIRMARN 224


>gi|269954686|ref|NP_954599.2| uncharacterized protein LOC218275 precursor [Mus musculus]
          Length = 330

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+K+N G+DT  SY YEA                                D  C
Sbjct: 183 MELAFQYVKENRGLDTRESYAYEAW-------------------------------DGPC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S     G+V +P  ++  L  AVA++GPVS+ ID  H SF+FY  G YYEP+C+
Sbjct: 212 RYDPKYSAVNITGFVKVPLSED-ALMNAVASVGPVSVGIDTHHHSFRFYRGGTYYEPDCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDHAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++R
Sbjct: 271 STNLDHAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDR 315


>gi|139002720|dbj|BAF51966.1| cathepsin K [Carassius auratus]
 gi|139002725|dbj|BAF51967.1| tartrate-resistant acid phosphatase [Carassius auratus]
          Length = 332

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+KDN GID+E  YPY                                  D  C
Sbjct: 184 MTNAFRYVKDNQGIDSEEGYPY-------------------------------VGTDQQC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  +G+ +IP+G+E  L AAVA +GPVS+ IDA   +F +Y  GVYY+P CN
Sbjct: 213 AYNSSARAATCKGFKEIPQGNEKALTAAVAKVGPVSVGIDAMQSTFLYYKSGVYYDPNCN 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  YW+VKNSW   WG +GY+ MARNR
Sbjct: 273 KDDVNHAVLAVGYGATPKGKKYWIVKNSWGEDWGKKGYVLMARNR 317


>gi|48429368|gb|AAT42452.1| cathepsin L-like protein [Laeonereis acuta]
          Length = 159

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+++N GID E +YPYEA                                DD+C
Sbjct: 10  MDNAFKYVEENGGIDLEQAYPYEAR-------------------------------DDSC 38

Query: 61  RYKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           RY     G+    +VD+ P   E  LKAAVA++GPVS+AIDA+H SFQ Y  G+Y+E  C
Sbjct: 39  RYMDYYKGSTLAKFVDVKPRQSEDALKAAVASVGPVSVAIDAAHPSFQLYKSGIYFENAC 98

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           + T  DHAVLVVGYG   +   YWLVKNSW T+WG +GYI MAR
Sbjct: 99  SPTVSDHAVLVVGYGVTSDNYPYWLVKNSWGTSWGMDGYIMMAR 142


>gi|328909405|gb|AEB61370.1| cathepsin S-like protein, partial [Equus caballus]
          Length = 281

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN+GID+++SYPY+AM                               D  C
Sbjct: 135 MTAAFQYIIDNNGIDSDASYPYKAM-------------------------------DGKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYY+P C 
Sbjct: 164 RYDSKNRAATCSKYTELPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 223 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGINFGDKGYIRMARN 265


>gi|351701620|gb|EHB04539.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 239

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 99/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N G+++E SYPYE                                 D +C
Sbjct: 89  MDFAFEYVKENKGLESEKSYPYEGK-------------------------------DGSC 117

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDIP+ ++  +KA V   GP+++A+DA   SFQFY +G+Y++PEC+
Sbjct: 118 KYKPELSAANDTGFVDIPQQEKALMKAMVEE-GPIAVAVDAGLMSFQFYKDGIYFDPECS 176

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGYG    D   N+YWLVKNSW + W  E YIK+ARNR
Sbjct: 177 SKDLNHGVLVVGYGYEEVDSEKNEYWLVKNSWGSEWDAESYIKIARNR 224


>gi|30017423|ref|NP_835199.1| testin-2 precursor [Mus musculus]
 gi|81895036|sp|Q80UB0.1|TEST2_MOUSE RecName: Full=Testin-2; Contains: RecName: Full=Testin-1; Flags:
           Precursor
 gi|29289939|gb|AAN63093.1| testin precursor [Mus musculus]
 gi|38173997|gb|AAH61218.1| RIKEN cDNA 4930486L24 gene [Mus musculus]
          Length = 333

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 92/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+ TE SYPY                                     C
Sbjct: 183 MQNAFQYVKDNGGLATEESYPY-------------------------------IGPGRKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A  R +V IP G E  L  AVA +GP+S+A+DASH SFQFY  G+YYEP+C 
Sbjct: 212 RYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCK 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              L+HAVLVVGY   G + +GN YWLVKNSW   WG +GYIK+A++
Sbjct: 271 RVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKD 317


>gi|395755765|ref|XP_002833453.2| PREDICTED: putative cathepsin L-like protein 6-like, partial [Pongo
           abelii]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 97/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +FQY+++N G+D+E+SY YE  +                                 C
Sbjct: 63  MDNSFQYVQENGGLDSEASYSYEGKVK-------------------------------TC 91

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D G+ DIP   E  L  AVAT+GP+S+A+DASH SFQFY +G+Y+EP C+
Sbjct: 92  RYNPKYSAANDTGFADIPSW-EKDLAKAVATVGPISVAVDASHVSFQFYKKGIYFEPCCD 150

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDHA+LVV Y   G D + N YWLVKNSW   WG +GYIKMA++R
Sbjct: 151 PEGLDHAMLVVDYSYEGADSDNNKYWLVKNSWGKNWGMDGYIKMAKDR 198


>gi|403300987|ref|XP_003941193.1| PREDICTED: cathepsin L2 [Saimiri boliviensis boliviensis]
          Length = 333

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 99/168 (58%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K+N G+D+E+SYPYEA                                D  C
Sbjct: 183 MNYAFRYVKENGGLDSEASYPYEAK-------------------------------DGIC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+V IP   E +L  AVAT+GP+S+A+DASH SFQFY  G+Y+E +C+
Sbjct: 212 KYKPENSVANDTGFVVIPT-HEKELMKAVATVGPISVAVDASHSSFQFYKSGIYFEKKCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VLVVGY   G +   N YWL+KNSW   WG  GYIK+A+++
Sbjct: 271 SKNLDHGVLVVGYGFEGANSKDNKYWLIKNSWGPEWGLNGYIKIAKDQ 318


>gi|148709357|gb|EDL41303.1| RIKEN cDNA 4930486L24 [Mus musculus]
          Length = 334

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 92/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+ TE SYPY                                     C
Sbjct: 184 MQNAFQYVKDNGGLATEESYPY-------------------------------IGPGRKC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A  R +V IP G E  L  AVA +GP+S+A+DASH SFQFY  G+YYEP+C 
Sbjct: 213 RYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCK 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              L+HAVLVVGY   G + +GN YWLVKNSW   WG +GYIK+A++
Sbjct: 272 RVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKD 318


>gi|313246319|emb|CBY35240.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M Q F YI DN+G+DTE+SYPY                               T+ D  C
Sbjct: 179 MTQGFTYIHDNNGVDTEASYPY-------------------------------TAQDGKC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  A  G       +I  GDE  L  AV  +GP+S+AIDASH SFQ Y+ GVYYEP C+
Sbjct: 208 VFNPANVGTSLTSCYNIASGDEAALANAVQMVGPMSVAIDASHMSFQLYTSGVYYEPNCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH V  VGYG+  +GND+++VKNSW  TWGD GYI M+RN+
Sbjct: 268 SQFLDHGVTAVGYGSS-SGNDFFIVKNSWAATWGDNGYIMMSRNK 311


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 92/164 (56%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  N GID++ +YPY                                  D+NC
Sbjct: 142 MTNAFEYVHVNRGIDSDDTYPY-------------------------------IGQDENC 170

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPEGDE  LK AVA  GPVS+ IDAS  SFQFYS GVYY+  CN
Sbjct: 171 MYNPTGKAAKCRGYKEIPEGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCN 230

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++HAVL VGYG+ + G  +W+VKNSW   WGD+GYI MARN
Sbjct: 231 ADNINHAVLAVGYGS-QKGTKHWIVKNSWGEDWGDKGYILMARN 273


>gi|62955529|ref|NP_001017778.1| cathepsin K precursor [Danio rerio]
 gi|62204416|gb|AAH92901.1| Cathepsin K [Danio rerio]
 gi|182889052|gb|AAI64579.1| Ctsk protein [Danio rerio]
          Length = 333

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 88/165 (53%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+ +N GID+E SYPY                                  D  C
Sbjct: 185 MTNAFRYVSNNQGIDSEESYPY-------------------------------VGTDQQC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  RGY +IP+G+E  L AAVA +GPVS+ IDA   +F +Y  GVYY+P CN
Sbjct: 214 AYNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCN 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  YW+VKNSW   WG +GY+ MARNR
Sbjct: 274 KEDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKGYVLMARNR 318


>gi|313213752|emb|CBY40632.1| unnamed protein product [Oikopleura dioica]
          Length = 440

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M Q F YI DN+G+DTE+SYPY                               T+ D  C
Sbjct: 293 MTQGFTYIHDNNGVDTEASYPY-------------------------------TAQDGKC 321

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  A  G       +I  GDE  L  AV  +GP+S+AIDASH SFQ Y+ GVYYEP C+
Sbjct: 322 VFNPANVGTSLTSCYNIASGDEAALANAVQMVGPMSVAIDASHMSFQLYTSGVYYEPNCS 381

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH V  VGYG+  +GND+++VKNSW  TWGD GYI M+RN+
Sbjct: 382 SQFLDHGVTAVGYGSS-SGNDFFIVKNSWAATWGDNGYIMMSRNK 425


>gi|149751225|ref|XP_001490531.1| PREDICTED: cathepsin S-like [Equus caballus]
          Length = 332

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN+GID+++SYPY+AM                               D  C
Sbjct: 186 MTAAFQYIIDNNGIDSDASYPYKAM-------------------------------DGKC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYY+P C 
Sbjct: 215 RYDSKNRAATCSKYTELPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSC- 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 274 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGINFGDKGYIRMARN 316


>gi|301767946|ref|XP_002919405.1| PREDICTED: cathepsin S-like [Ailuropoda melanoleuca]
          Length = 340

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A                                D  C
Sbjct: 194 MTEAFQYIIDNNGIDSEASYPYKAT-------------------------------DGKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y ++P G E  LK AVA  GPVS+AIDA H SF  Y  GVYY+P C 
Sbjct: 223 RYDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGVYYDPSC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 282 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGDQGYIRMARN 324


>gi|281352890|gb|EFB28474.1| hypothetical protein PANDA_008012 [Ailuropoda melanoleuca]
          Length = 328

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A                                D  C
Sbjct: 182 MTEAFQYIIDNNGIDSEASYPYKAT-------------------------------DGKC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y ++P G E  LK AVA  GPVS+AIDA H SF  Y  GVYY+P C 
Sbjct: 211 RYDSKNRAATCSKYTELPSGSEDDLKEAVANKGPVSVAIDARHSSFFLYRSGVYYDPSC- 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 270 TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGDQGYIRMARN 312


>gi|61661067|gb|AAX51229.1| cathepsin S cysteine protease [Paralichthys olivaceus]
          Length = 337

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 98/165 (59%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY+ DN GID+E+SYPY   +                                 C
Sbjct: 191 MDRAFQYVIDNKGIDSEASYPYRGQL-------------------------------QQC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A    Y  +PEGDE  LK A+ATIGP+S+AIDA+  +F FY  GVY +P C 
Sbjct: 220 SYNPSYRAANCSRYSFLPEGDEGALKNALATIGPISVAIDATRPTFAFYRSGVYNDPTC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VL VGYGT E+G DYWLVKNSW T++GD+GYI+M+RN+
Sbjct: 279 TQRVNHGVLAVGYGT-ESGQDYWLVKNSWGTSFGDKGYIRMSRNK 322


>gi|149030666|gb|EDL85703.1| cathepsin S [Rattus norvegicus]
          Length = 291

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+E+SYPY+AM                               D+ C
Sbjct: 145 MTEAFQYIIDNGGIDSEASYPYKAM-------------------------------DEKC 173

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+++P GDE  LK AVAT GPVS+ IDASH SF  Y  GVY +P C 
Sbjct: 174 HYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDASHSSFFLYQSGVYDDPSC- 232

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 233 TENVNHGVLVVGYGT-LDGKDYWLVKNSWGLHFGDQGYIRMARN 275


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 95/168 (56%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ D  G+D+E SYPY  ++                                 C
Sbjct: 183 MDNAFQYVLDVGGLDSEESYPYTGLVG-------------------------------TC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A + G+VD+P+  E  L  AVAT+GP+S+A+DAS+ SFQFY  G+YYEP+C 
Sbjct: 212 NYNPKNSAANETGFVDLPK-QENALMKAVATLGPISVAVDASNPSFQFYKSGIYYEPKCK 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGY   G D + N YWLVKNSW   WG  GYIKMA+++
Sbjct: 271 SESVDHGVLVVGYGFEGADSDDNKYWLVKNSWGKHWGINGYIKMAKDQ 318


>gi|27465595|ref|NP_775155.1| testin-2 precursor [Rattus norvegicus]
 gi|1174639|sp|P15242.2|TEST2_RAT RecName: Full=Testin-2; AltName: Full=CMB-23; Contains: RecName:
           Full=Testin-1; AltName: Full=CMB-22; Flags: Precursor
 gi|577430|gb|AAC52162.1| testin [Rattus norvegicus]
 gi|149039744|gb|EDL93860.1| testin gene [Rattus norvegicus]
          Length = 333

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/167 (44%), Positives = 92/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+ TE SYPY                                     C
Sbjct: 183 MQYAFQYVKDNGGLATEESYPYRGQ-------------------------------GREC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A  R +V IP G E  L  AVA +GP+S+A+DASH SFQFY  G+YYEP+C 
Sbjct: 212 RYHAENSAANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCK 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              L+HAVLVVGY   G + +GN +WLVKNSW   WG +GY+K+A++
Sbjct: 271 RVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKD 317


>gi|74152091|dbj|BAE32077.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 99  MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 127

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A   GY+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 128 HYNSKNRAATCSGYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 186

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 187 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 229


>gi|66823245|ref|XP_644977.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
 gi|166201986|sp|P54640.2|CYSP5_DICDI RecName: Full=Cysteine proteinase 5; Flags: Precursor
 gi|60473097|gb|EAL71045.1| cysteine proteinase 5 precursor [Dictyostelium discoideum AX4]
          Length = 344

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 112/251 (44%), Gaps = 103/251 (41%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI +N+GIDTESSYPY+A                                +  C
Sbjct: 179 MTYAFEYIINNNGIDTESSYPYKAE-------------------------------NGKC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA    Y  +  G E  L++AV  + PVS+AIDASHQSFQ Y+ G+YYEPEC+
Sbjct: 208 EYKSENSGATLSSYKTVTAGSESSLESAV-NVNPVSVAIDASHQSFQLYTSGIYYEPECS 266

Query: 121 STQLDHAVLVVGY------------------GTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
           S  LDH VL VGY                   +  + N+YW+VKNSW T+WG EGYI M+
Sbjct: 267 SENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMS 326

Query: 163 RNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNC 222
           RNR                                                     +NNC
Sbjct: 327 RNR-----------------------------------------------------DNNC 333

Query: 223 GVASSASFPLV 233
           G+ASSASFP+V
Sbjct: 334 GIASSASFPVV 344


>gi|1222694|gb|AAA92018.1| CP5 [Dictyostelium discoideum]
          Length = 344

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 112/251 (44%), Gaps = 103/251 (41%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI +N+GIDTESSYPY+A                                +  C
Sbjct: 179 MTYAFEYIINNNGIDTESSYPYKAE-------------------------------NGKC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   SGA    Y  +  G E  L++AV  + PVS+AIDASHQSFQ Y+ G+YYEPEC+
Sbjct: 208 EYKSENSGATLSSYKTVTAGSESSLESAV-NVNPVSVAIDASHQSFQLYTSGIYYEPECS 266

Query: 121 STQLDHAVLVVGY------------------GTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
           S  LDH VL VGY                   +  + N+YW+VKNSW T+WG EGYI M+
Sbjct: 267 SENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMS 326

Query: 163 RNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNC 222
           RNR                                                     +NNC
Sbjct: 327 RNR-----------------------------------------------------DNNC 333

Query: 223 GVASSASFPLV 233
           G+ASSASFP+V
Sbjct: 334 GIASSASFPVV 344


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+++N GID+E +YPY                                  +++C
Sbjct: 182 MTNAFQYVQENRGIDSEDAYPY-------------------------------VGQEESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  CN
Sbjct: 211 MYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLSSFQFYSKGVYYDESCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L+HA+L VGYG  + GN +W++KNSW   WG++GY+ +ARN+
Sbjct: 271 GEDLNHALLAVGYGM-QRGNKHWILKNSWGENWGNKGYVLLARNK 314


>gi|124487918|gb|ABN12042.1| putative cathepsin L precursor [Maconellicoccus hirsutus]
          Length = 211

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/167 (47%), Positives = 96/167 (57%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF Y+ DN GID+E SYPY                        R  Q         C
Sbjct: 62  MENAFNYVIDNGGIDSEGSYPY----------------------IDRETQ---------C 90

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A  + +  +P GDE  LK AVA +GP+SIAI+ S +SF+ Y  GVYY+ +C 
Sbjct: 91  AYKPENSAANIKDFATLPVGDEEMLKLAVAKVGPISIAINTSPRSFKLYKSGVYYDKDCK 150

Query: 121 S--TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S    L HAVLVVGYGT E+G DYWLVKNSWNT WG+ GYIKMARN+
Sbjct: 151 SDPDDLTHAVLVVGYGT-EDGKDYWLVKNSWNTDWGENGYIKMARNK 196


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y+K   GI++ES YPY+A                                   C
Sbjct: 235 MENAFKYVKSVGGIESESDYPYKAR-------------------------------QRTC 263

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + + K  A   G VD+  G E  LK  V+ +GPVS+AIDA H SFQ Y+ GVY EP C+
Sbjct: 264 AFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAIDAGHSSFQLYAGGVYDEPLCS 323

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +++L+H VL VGYGT   G DYW+VKNSW   WG EGYIKM+RN+
Sbjct: 324 TSRLNHGVLCVGYGTSLQGKDYWIVKNSWGVRWGVEGYIKMSRNK 368


>gi|169791725|pdb|2VHS|A Chain A, Cathsilicatein, A Chimera
 gi|169791726|pdb|2VHS|B Chain B, Cathsilicatein, A Chimera
 gi|169791727|pdb|2VHS|C Chain C, Cathsilicatein, A Chimera
 gi|169791728|pdb|2VHS|D Chain D, Cathsilicatein, A Chimera
          Length = 217

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+  +C+
Sbjct: 99  KYNPKYSVANDVGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFSSDCS 157

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ L+HA+LVVGYG   N   YWLVKNSW   WG  GY+KMA++R
Sbjct: 158 SSSLNHAMLVVGYGFISNNQKYWLVKNSWGEEWGMGGYVKMAKDR 202


>gi|213514640|ref|NP_001134963.1| Cathepsin S precursor [Salmo salar]
 gi|209155506|gb|ACI33985.1| Cathepsin S precursor [Salmo salar]
 gi|209737594|gb|ACI69666.1| Cathepsin S precursor [Salmo salar]
 gi|223647278|gb|ACN10397.1| Cathepsin S precursor [Salmo salar]
 gi|223673157|gb|ACN12760.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID++ SYPY+ +                                  C
Sbjct: 184 MSQAFQYVIDNQGIDSDQSYPYKGV-------------------------------QQQC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A+  A    Y  +PEGDE  LK A+ATIGP+S+AIDA+   F FY  GVY +P C 
Sbjct: 213 SYNPAQRAANCSKYSFLPEGDEGVLKEALATIGPISVAIDATRPLFTFYRSGVYNDPTC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++HAVL VGYGT   G DYWLVKNSW+ +WGD+GYI+M+RN+
Sbjct: 272 TKKINHAVLAVGYGT-LGGQDYWLVKNSWSLSWGDQGYIRMSRNK 315


>gi|226821425|gb|ACO82388.1| cathepsin S [Lutjanus argentimaculatus]
          Length = 337

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+ DN GID+++SYPY                               T   D C
Sbjct: 191 MDHAFQYVIDNQGIDSDASYPY-------------------------------TGRSDQC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A    Y  +PEGDE  LK A+ATIGP+S+AIDA+   F FY  GVY +P C 
Sbjct: 220 HYNPSYRAANCSSYNFLPEGDEGALKQALATIGPISVAIDATRPRFIFYRSGVYNDPSC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL VGYGT  NG DYWLVKNSW T +GD+GYI+MARN+
Sbjct: 279 SQEVNHGVLAVGYGT-LNGQDYWLVKNSWGTKFGDQGYIRMARNQ 322


>gi|198432217|ref|XP_002130230.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 327

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/166 (45%), Positives = 95/166 (57%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI    G+++E+ YPYEA                                +D+C
Sbjct: 179 MDYAFDYIFLAGGVESEADYPYEAR-------------------------------NDHC 207

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +   A   G VD+  G E +L+ AV +IGPVS+AIDASH SFQ Y  GV YEP C+
Sbjct: 208 RFDNSSIAATLTGCVDVTSGSETQLEKAVGSIGPVSVAIDASHISFQLYGSGVNYEPMCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGD-EGYIKMARNR 165
           +T LDH VL VGYG D NGN+YW+VKNSW   WG   GYIKM++NR
Sbjct: 268 TTTLDHGVLAVGYGAD-NGNEYWIVKNSWGEGWGHLNGYIKMSKNR 312


>gi|440893559|gb|ELR46281.1| Cathepsin L1 [Bos grunniens mutus]
          Length = 330

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQY+ D  G+D+E SYPY  ++                                 C
Sbjct: 180 IDNAFQYVLDVGGLDSEESYPYTGLVG-------------------------------TC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A + G+VD+P+  E  L  AVAT+GP+S+A+DA + SFQFY  G+YYEP C+
Sbjct: 209 LYNPNNSAANETGFVDLPK-QEKALMKAVATLGPISVAVDAHNPSFQFYKSGIYYEPNCS 267

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DHAVLVVGY   G D + N YWLVKNSW   WG +GYIKMA++R
Sbjct: 268 SESVDHAVLVVGYGFEGADSDDNKYWLVKNSWGEHWGMDGYIKMAKDR 315


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ A+ YIK   G++ ES+YPY                               T+ D  C
Sbjct: 177 MESAYDYIKGVGGVELESAYPY-------------------------------TARDGRC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ R+K  A  +GYV IP GDE  L  AV TIGPV+++IDAS  SFQ Y  GVY    C+
Sbjct: 206 KFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAVSIDASGYSFQLYESGVYDFRRCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST LDH VL VGYGT E G +YWLVKNSW   WGD+GYIKM++++
Sbjct: 266 STNLDHGVLAVGYGT-EGGQNYWLVKNSWGPGWGDQGYIKMSKDK 309


>gi|162815|gb|AAA30435.1| cathepsin S, partial [Bos taurus]
 gi|312895|emb|CAA43971.1| cathepsin S [Bos taurus]
          Length = 196

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 50  MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 78

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDASH SF  Y  GVYY+P C 
Sbjct: 79  QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSC- 137

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 138 TQNVNHGVLVVGYG-NLDGKDYWLVKNSWGLHFGDQGYIRMARN 180


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 97/187 (51%), Gaps = 53/187 (28%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N+GIDTESSYPY A                              S    C
Sbjct: 335 MDYAFEYIITNNGIDTESSYPYTA------------------------------SSGTTC 364

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y +A SGA    Y +I  G E  L  AV   GPVS+AIDASH SFQ YS G+YY+  C+
Sbjct: 365 KYNKANSGATISSYKNITAGSESDLADAVKNAGPVSVAIDASHNSFQLYSHGIYYDASCS 424

Query: 121 STQLDHAVLVVGYG----------------------TDENGNDYWLVKNSWNTTWGDEGY 158
           S  LDH VLVVGYG                      TD+  N YW+VKNSW T+WGD+G+
Sbjct: 425 SVNLDHGVLVVGYGSGTPDSDSRVHKGSQVRVKVPKTDDTKN-YWIVKNSWGTSWGDKGF 483

Query: 159 IKMARNR 165
           I M+++R
Sbjct: 484 IYMSKDR 490


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 96/164 (58%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI DN GI TESSYPY                               T+    C
Sbjct: 186 MVNAFEYIIDNGGIATESSYPY-------------------------------TAAQGRC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ ++ +GA   GY +IP+G+E  L AA+A   PVS+AIDASH SFQ YS GVY EP C+
Sbjct: 215 KFTKSMNGANIIGYKEIPQGEEDSLTAALAK-QPVSVAIDASHMSFQLYSSGVYDEPACS 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH VL VGYGT E G DY+++KNSW  TWG +GYI M+RN
Sbjct: 274 SEALDHGVLAVGYGTLE-GKDYYIIKNSWGPTWGQDGYIFMSRN 316


>gi|330842502|ref|XP_003293216.1| hypothetical protein DICPUDRAFT_95775 [Dictyostelium purpureum]
 gi|325076482|gb|EGC30264.1| hypothetical protein DICPUDRAFT_95775 [Dictyostelium purpureum]
          Length = 376

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/201 (41%), Positives = 100/201 (49%), Gaps = 66/201 (32%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI  N GIDTESSYPY+A                                   C
Sbjct: 191 MDNAFIYIIQNKGIDTESSYPYKAQSG------------------------------TKC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA   GYV+I  G E +L+ AVA  GPVS+AIDASH SFQ YS GVYYEP+C+
Sbjct: 221 LFKPTSIGATLSGYVNITAGSESQLETAVAKNGPVSVAIDASHNSFQLYSSGVYYEPKCS 280

Query: 121 STQLDHAVLVVGYG------------------------------TDENGND------YWL 144
            T+LDH VLVVGYG                              TD + +D      YWL
Sbjct: 281 PTELDHGVLVVGYGVAKKDENNASPNKHQIRIRHNDDFGIDEIVTDSSSDDGRKTSQYWL 340

Query: 145 VKNSWNTTWGDEGYIKMARNR 165
           VKNSW  +WG +G+I+M++NR
Sbjct: 341 VKNSWGVSWGMQGFIQMSKNR 361


>gi|432910512|ref|XP_004078392.1| PREDICTED: cathepsin K-like [Oryzias latipes]
          Length = 331

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+++N GID+E++YPY                                  D  C
Sbjct: 183 MTNAFKYVQENGGIDSEAAYPY-------------------------------MGEDQPC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +   A  +GY ++PEGDE+ L  A+   GPVS+ IDAS  SF +Y +G+Y++  CN
Sbjct: 212 RYNVSGLAAQIKGYKEVPEGDEHALAVALFKAGPVSVGIDASQNSFLYYQKGIYFDRNCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG +  G  +W+VKNSW  TWG++GY+ MARNR
Sbjct: 272 KEDINHAVLAVGYGVNAKGKKFWIVKNSWGETWGNKGYVLMARNR 316


>gi|417409876|gb|JAA51427.1| Putative cathepsin s, partial [Desmodus rotundus]
          Length = 342

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GI++E+SYPY+AM                               D  C
Sbjct: 196 MTEAFQYIIDNNGIESEASYPYKAM-------------------------------DGKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++PE  E  LK AVA  GPVS+AIDASH SF  Y  GVYY+P C 
Sbjct: 225 QYDSKYRAATCSRYTELPEDSEDALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDPAC- 283

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 284 TLHVNHGVLVVGYG-NLNGKDYWLVKNSWGLHFGDQGYIRMARN 326


>gi|440906716|gb|ELR56945.1| Cathepsin S, partial [Bos grunniens mutus]
          Length = 342

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 196 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDASH SF  Y  GVYY+P C 
Sbjct: 225 QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSC- 283

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 284 TQNVNHGVLVVGYG-NLDGKDYWLVKNSWGLHFGDQGYIRMARN 326


>gi|426365294|ref|XP_004049712.1| PREDICTED: LOW QUALITY PROTEIN: putative cathepsin L-like protein
           6-like [Gorilla gorilla gorilla]
          Length = 333

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 97/168 (57%), Gaps = 36/168 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F+Y+++N G+D+E+SYPYE  +                                 C
Sbjct: 184 MDNPFRYVQENRGLDSEASYPYEGKVK-------------------------------TC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A D G+VDIP   E  L  AVAT+GP+S+A+ ASH SFQFY +G+Y+EP C+
Sbjct: 213 GYNPKYSAANDTGFVDIPS-REKDLAKAVATVGPISVAVGASHVSFQFYKKGIYFEPRCD 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDHA+LVVGY   G D + N YWLVKNSW   WG +GYIKMA++R
Sbjct: 272 PEGLDHAMLVVGYSYEGADWD-NKYWLVKNSWGKNWGMDGYIKMAKDR 318


>gi|3929821|emb|CAA77183.1| cathepsin L [Mus musculus]
          Length = 168

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/152 (49%), Positives = 91/152 (59%), Gaps = 35/152 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 49  MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 77

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 78  KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 136

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSW 149
           S  LDH VL+VGY   GTD N N YWLVKNSW
Sbjct: 137 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSW 168


>gi|118136313|gb|ABK62794.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
 gi|118136315|gb|ABK62795.1| cathepsin L-like cysteine protease [Neobenedenia melleni]
          Length = 335

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD +F Y+  N G+++E+SYPYEA                                   C
Sbjct: 187 MDNSFNYLIHNKGLESEASYPYEAQ-------------------------------KKEC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK+A S      + D+ + DE  LK AV  +GPVSIAIDAS  SF  Y  GVY E +C+
Sbjct: 216 RYKKALSKGTISSFTDVSQFDEKDLKRAVGLVGPVSIAIDASQFSFHLYDSGVYDEEDCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T L+H VL VGYGT   G DYW VKNSW  TWG EGYI M+RN+
Sbjct: 276 QTMLNHGVLAVGYGTTPEGLDYWKVKNSWTNTWGMEGYILMSRNK 320


>gi|291398027|ref|XP_002715626.1| PREDICTED: cathepsin S [Oryctolagus cuniculus]
          Length = 331

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 92/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 185 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 214 HYDSKHRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHSSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VL VGYG +  G DYWLVKNSW   +G++GYI+MARN
Sbjct: 273 TQNVNHGVLAVGYG-NLKGKDYWLVKNSWGIHFGEQGYIRMARN 315


>gi|75812934|ref|NP_001028787.1| cathepsin S precursor [Bos taurus]
 gi|115503669|sp|P25326.2|CATS_BOVIN RecName: Full=Cathepsin S; Flags: Precursor
 gi|74353837|gb|AAI02246.1| Cathepsin S [Bos taurus]
 gi|296489535|tpg|DAA31648.1| TPA: cathepsin S precursor [Bos taurus]
          Length = 331

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 185 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDASH SF  Y  GVYY+P C 
Sbjct: 214 QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 273 TQNVNHGVLVVGYG-NLDGKDYWLVKNSWGLHFGDQGYIRMARN 315


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+AM                               D+ C
Sbjct: 184 MTEAFQYIIDNGGIEADASYPYKAM-------------------------------DEKC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 213 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 272 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 314


>gi|4379391|emb|CAA75189.1| unnamed protein product [Litopenaeus vannamei]
          Length = 111

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 89/163 (54%), Gaps = 53/163 (32%)

Query: 71  DRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLV 130
           D GYVD+  G E  LK AVATIGP+S+AIDAS  SFQFY +GVYYE  C+ST LDH VL 
Sbjct: 2   DTGYVDVEHGSESALKKAVATIGPISVAIDASQPSFQFYHDGVYYEEGCSSTMLDHGVLA 61

Query: 131 VGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDE 190
           VGYG  E G  YWLVKNSWNT+WG++GYI+M+R++                         
Sbjct: 62  VGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDK------------------------- 96

Query: 191 NGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
                                       +NNCG+AS AS+PLV
Sbjct: 97  ----------------------------KNNCGIASQASYPLV 111


>gi|444519959|gb|ELV12909.1| Cathepsin L1 [Tupaia chinensis]
          Length = 333

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +AFQY+KDN G+D+E SYPYE M                               +  CRY
Sbjct: 185 KAFQYVKDNGGLDSEESYPYEEM-------------------------------ESTCRY 213

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               S A   G+  IP  +E  L+ AVA++GP+S+AIDA H SFQFY+ G+ +EP C+  
Sbjct: 214 SPGNSAATVTGFKHIP-AEEKALEKAVASVGPISVAIDAHHHSFQFYTGGILHEPNCSPK 272

Query: 123 QLDHAVLVVGYGTDENG---NDYWLVKNSWNTTWGDEGYIKMARNR 165
            L+HAVLVVGYG  + G   N YWLVKNSW   WG  GYI MA+++
Sbjct: 273 WLNHAVLVVGYGVMQEGSNNNTYWLVKNSWGERWGVGGYIMMAKDK 318


>gi|255211|gb|AAB23202.1| cathepsin S [cattle, spleen, Peptide Partial, 217 aa]
 gi|227966|prf||1714236A cathepsin S
          Length = 217

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 71  MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDASH SF  Y  GVYY+P C 
Sbjct: 100 QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 159 TQNVNHGVLVVGYG-NLDGKDYWLVKNSWGLHFGDQGYIRMARN 201


>gi|149617838|ref|XP_001521715.1| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 338

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 95/168 (56%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQYI  N GID+E  YPY A                     K + Q         C
Sbjct: 186 VDLAFQYILQNQGIDSEDCYPYTA---------------------KDTAQ---------C 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K   + A   G+VDIP   E  L  AVAT+GPVS+ IDAS  SF+FY  G++Y+P+C+
Sbjct: 216 TFKPECATAPVTGFVDIPPHSEEALMKAVATVGPVSVGIDASSTSFRFYQSGIFYDPKCS 275

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDHAVLVVGYG    DE G  YW+VKNSW   WGD GY+ M+++R
Sbjct: 276 SESLDHAVLVVGYGYEREDEAGKKYWIVKNSWGKHWGDRGYVYMSKDR 323


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+AM                               D+ C
Sbjct: 194 MTEAFQYIIDNGGIEADASYPYKAM-------------------------------DEKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 223 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 282 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 324


>gi|381283083|gb|AFG19440.1| cathepsin L, partial [Larimichthys crocea]
          Length = 257

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 71/152 (46%), Positives = 89/152 (58%), Gaps = 33/152 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY+KDNHG+D+E SYPY                              + + D  C
Sbjct: 136 MDQAFQYVKDNHGLDSEDSYPY------------------------------LGTDDQPC 165

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A D G+VD+P G E+ L  AVA +GPVS+AIDA H+SFQFY  G+YYE +C+
Sbjct: 166 HYDPNYNSANDTGFVDVPSGKEHALMKAVAAVGPVSVAIDAGHESFQFYQSGIYYEKDCS 225

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSW 149
           S +LDH VLVVGY   G D +G  YW+V NSW
Sbjct: 226 SEELDHGVLVVGYGFEGEDVDGKKYWIVNNSW 257


>gi|346574377|gb|AEO36960.1| silicatein-alpha 3 [Baikalospongia fungiformis]
          Length = 324

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSYPY+   S                               +C+Y 
Sbjct: 180 AFKYVVDNGGIDTESSYPYKGKQS-------------------------------SCQYN 208

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA+  G V I  G E  L +AVA++GP+++A+DAS  +F FY  GV+    C++++
Sbjct: 209 SKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCSTSK 268

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW T WG+ GYIKM RN+
Sbjct: 269 LNHAMLVTGYGS-TNGKDYWLVKNSWGTGWGESGYIKMVRNK 309


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+AM                               D+ C
Sbjct: 194 MTEAFQYIIDNGGIEADASYPYKAM-------------------------------DEKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 223 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 282 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 324


>gi|114793879|pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra-
           14013
          Length = 217

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A   A  R Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSAYRAATCRKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G++GYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEKGYIRMARNK 202


>gi|94448668|emb|CAI91572.1| silicatein a3 [Lubomirskia baicalensis]
          Length = 344

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSYPY+   S                               +C+Y 
Sbjct: 200 AFKYVVDNGGIDTESSYPYKGKKS-------------------------------SCQYN 228

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA+  G V I  G E  L +AVA++GP+++A+DAS  +F FY  GV+    C++++
Sbjct: 229 SKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCSTSK 288

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW T WG+ GYIKM RN+
Sbjct: 289 LNHAMLVTGYGS-TNGKDYWLVKNSWGTGWGESGYIKMVRNK 329


>gi|312386083|gb|ADQ74586.1| silicatein alpha 3 [Lubomirskia baicalensis]
          Length = 330

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 94/162 (58%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSYPY+   S                               +C+Y 
Sbjct: 186 AFKYVVDNGGIDTESSYPYKGKKS-------------------------------SCQYN 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA+  G V I  G E  L +AVA++GP+++A+DAS  +F FY  GV+    C++++
Sbjct: 215 SKNVGAISTGVVKIASGSETDLLSAVASVGPIAVAVDASVNAFMFYQSGVFDSSTCSTSK 274

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW T WG+ GYIKM RN+
Sbjct: 275 LNHAMLVTGYGS-TNGKDYWLVKNSWGTGWGESGYIKMVRNK 315


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N GIDTE SYPY A                                   C
Sbjct: 180 MDYAFEYIIRNKGIDTEESYPYHASQG-------------------------------TC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +  SG     Y ++P G+E  L  AVAT  P S+AIDASH SFQFY  GVY EP C+
Sbjct: 209 RYNKQHSGGELVSYTNVPSGNEGALLNAVATQ-PTSVAIDASHSSFQFYKGGVYDEPACS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++LDH VL VG+G   +G DYWLVKNSW   WG  GYI+M+RN+
Sbjct: 268 SSRLDHGVLAVGWGV-RDGKDYWLVKNSWGADWGLSGYIEMSRNK 311


>gi|405963298|gb|EKC28885.1| Cathepsin L [Crassostrea gigas]
          Length = 265

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 96/163 (58%), Gaps = 32/163 (19%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +A++YIK+N GIDTE SYPY          L ++                     + C +
Sbjct: 120 KAYKYIKENGGIDTEESYPY----------LGKK---------------------ETCSF 148

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
           + ++ GA   G+V +  GDE  LK AVA++GP+++ IDAS  SFQ Y  GVY E  CN  
Sbjct: 149 RPSEVGATCTGFVQVTAGDELALKKAVASVGPITVCIDASQPSFQLYKGGVYDEQSCNPI 208

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             DHAVL+VGYG  + G DYWLVKNSW T+WG +GYI M+RN+
Sbjct: 209 VFDHAVLIVGYGVYQ-GKDYWLVKNSWGTSWGMDGYIMMSRNQ 250


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTTAFQYVQQNGGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GP+S++IDAS  SFQFYS GVYY+  C+
Sbjct: 211 MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCD 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVLVVGYGT + G+ +W++KNSW  +WG++GY  +ARN+
Sbjct: 271 RDNVNHAVLVVGYGT-QKGSKHWIIKNSWGESWGNKGYALLARNK 314


>gi|328872971|gb|EGG21338.1| cysteine proteinase 5 precursor [Dictyostelium fasciculatum]
          Length = 358

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 92/191 (48%), Gaps = 58/191 (30%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N GIDTE+SYPY A +                                 C
Sbjct: 185 MDNAFKYIIANGGIDTEASYPYVAKV-------------------------------QKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A SGA    YVD+  G E  L++     GPVS+AIDASHQSFQ Y  GVYYEP C+
Sbjct: 214 KYNPANSGATLSSYVDVTSGSESALQSQTVK-GPVSVAIDASHQSFQLYDSGVYYEPACS 272

Query: 121 STQLDHAVLVVGYGT--------------------------DENGNDYWLVKNSWNTTWG 154
           ST LDH VLVVGYGT                             G  +W VKNSW   WG
Sbjct: 273 STNLDHGVLVVGYGTASANGSSDSDSSAASQSSSSESSDDQATQGAQFWKVKNSWGPEWG 332

Query: 155 DEGYIKMARNR 165
             GYI+MARNR
Sbjct: 333 LSGYIQMARNR 343


>gi|288764223|emb|CAQ03432.1| silcatein 1 [Spongilla lacustris]
 gi|296168747|emb|CAQ54051.1| silicatein alpha 3 [Spongilla lacustris]
          Length = 327

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 94/162 (58%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSYPY+   S                               +C+Y 
Sbjct: 183 AFKYVVDNGGIDTESSYPYKGKQS-------------------------------SCQYN 211

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              +GA   G V I  G E  L +AVA+ GPV++A+DAS  SF FY  GV+    C++T+
Sbjct: 212 SKNAGATATGVVKIASGSESDLMSAVASGGPVAVAVDASVNSFMFYQSGVFDSSTCSNTK 271

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW T+WG+ GYI+M RN+
Sbjct: 272 LNHAMLVTGYGS-VNGKDYWLVKNSWGTSWGESGYIRMVRNK 312


>gi|410904751|ref|XP_003965855.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 331

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  N GID+E+SYPY A                                + +C
Sbjct: 183 MTNAFRYVATNRGIDSEASYPYVAQ-------------------------------EQSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK +   A    Y ++P+G+E +L  A+   GP+++ IDA+  +FQ YS+GVYY+P CN
Sbjct: 212 QYKESGKAAECSSYEEVPQGNEKQLAYALFKHGPIAVGIDATLSTFQLYSKGVYYDPNCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL+VGYG +  G  YW+VKNSW+T WG+ GY+ MARNR
Sbjct: 272 PENINHAVLLVGYGVNSRGQHYWIVKNSWSTNWGNGGYVLMARNR 316


>gi|156554647|ref|XP_001605314.1| PREDICTED: cathepsin L-like [Nasonia vitripennis]
          Length = 353

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 95/163 (58%), Gaps = 30/163 (18%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +FQ++ D  G++ E++Y YE                       R+ +    + DD     
Sbjct: 205 SFQFVVDQKGLEPEANYSYEG----------------------RTKECPYNTSDD----- 237

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             +   +D  ++ +  GDE  LK AVAT+GP S AID SH +F+FYSEGVYY+PECN   
Sbjct: 238 --EDEELDASFIYVNGGDEATLKVAVATVGPFSAAIDGSHDTFRFYSEGVYYQPECNEDD 295

Query: 124 LDHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           LDHAVL+VGYGTD     D+WLVKNSW  TWG+ GY K+ARNR
Sbjct: 296 LDHAVLIVGYGTDNRTDQDFWLVKNSWGETWGEGGYFKVARNR 338


>gi|344257450|gb|EGW13554.1| Testin-2 [Cricetulus griseus]
          Length = 401

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++DN G+ TE SYPY+                                    C
Sbjct: 251 MQSAFQYVRDNGGLATEESYPYQGHAM-------------------------------EC 279

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY+   S A  + +V IP G E  L  AVA +GP+S+AIDA H SFQFY  G+YYEP+C 
Sbjct: 280 RYQAKNSAANVKDFVQIP-GHEEALMKAVANVGPISVAIDARHSSFQFYESGIYYEPKCK 338

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
               +HAVLVVGY   G + +GN YWLVKNSW   WG +GY+K+A++
Sbjct: 339 RVHQNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGIKGYMKIAKD 385


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 91/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ A+ YI+D  G+  ES+YPY A                                +  C
Sbjct: 177 MESAYDYIRDAGGVQLESAYPYTAQ-------------------------------NGRC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + ++K+ A   G+V IP GDE  L  AV T+GPV++AIDAS   FQ Y  GVY    C+
Sbjct: 206 HFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAVAIDASGYDFQLYESGVYDRSRCS 265

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ LDH VL  GYGT E GNDYWLVKNSW   WG +GYIKM+RN+
Sbjct: 266 SSSLDHGVLAAGYGT-EGGNDYWLVKNSWGPGWGAQGYIKMSRNK 309


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++ N GID+E +YPY                                  D +C
Sbjct: 182 MTTAFRYVQTNGGIDSEDAYPY-------------------------------VGQDQSC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G E  LK AVA +GP+S++IDAS  SFQFYS GVYY+  C+
Sbjct: 211 MYNPTAKAAKCRGYREIPVGSEKALKRAVARVGPISVSIDASLTSFQFYSRGVYYDENCD 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVLVVGYG  + GN +W++KNSW  +WG++GY+ +ARNR
Sbjct: 271 GDNVNHAVLVVGYGA-QKGNKHWIIKNSWGESWGNKGYVLLARNR 314


>gi|354502589|ref|XP_003513366.1| PREDICTED: testin-2-like [Cricetulus griseus]
          Length = 333

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 35/167 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++DN G+ TE SYPY+                                    C
Sbjct: 183 MQSAFQYVRDNGGLATEESYPYQGHAM-------------------------------EC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY+   S A  + +V IP G E  L  AVA +GP+S+AIDA H SFQFY  G+YYEP+C 
Sbjct: 212 RYQAKNSAANVKDFVQIP-GHEEALMKAVANVGPISVAIDARHSSFQFYESGIYYEPKCK 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
               +HAVLVVGY   G + +GN YWLVKNSW   WG +GY+K+A++
Sbjct: 271 RVHQNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGIKGYMKIAKD 317


>gi|310975577|gb|ADP55137.1| cathepsin S [Miichthys miiuy]
          Length = 338

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DNHGID++++YPY    S                                C
Sbjct: 191 MHKAFQYVIDNHGIDSDAAYPYTGRQS------------------------------QEC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y  +PEGDE  LK A+ATIGP+S+AIDA    F FYS GVY +P C 
Sbjct: 221 HYSPKFRAANCSQYSFLPEGDEGALKQALATIGPISVAIDARRPRFAFYSSGVYDDPSC- 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++H VL VGYGT  NG DYWLVKNSW  T+GD GYI+MARN+
Sbjct: 280 SQDVNHGVLAVGYGT-LNGQDYWLVKNSWGQTFGDNGYIRMARNK 323


>gi|330801846|ref|XP_003288934.1| hypothetical protein DICPUDRAFT_153222 [Dictyostelium purpureum]
 gi|325081026|gb|EGC34558.1| hypothetical protein DICPUDRAFT_153222 [Dictyostelium purpureum]
          Length = 334

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 93/168 (55%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M ++FQ++ D  G  +E+SYPYEA                                D +C
Sbjct: 183 MLESFQFLLDQGGAVSEASYPYEAK-------------------------------DASC 211

Query: 61  RYKRAKSGAVD--RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
           R+   K+  V    G V+I  GDE  L+ A+AT GPV++AIDA H SFQ Y  GVYYEP 
Sbjct: 212 RFDSVKTPIVATFNGTVEIRRGDEGDLQQAIATHGPVAVAIDAGHISFQLYKTGVYYEPY 271

Query: 119 CNSTQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+S  L HAVL VGY TD   G DYW+V NSW   WGD G+IKMARNR
Sbjct: 272 CSSYSLSHAVLAVGYDTDSVTGKDYWIVANSWGLKWGDSGFIKMARNR 319



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 3/79 (3%)

Query: 155 DEGYI--KMARNRVYYEPECNSTQLDHAVLVVGYGTDE-NGNDYWLVKNSWNTTWGDEGY 211
           D G+I  ++ +  VYYEP C+S  L HAVL VGY TD   G DYW+V NSW   WGD G+
Sbjct: 253 DAGHISFQLYKTGVYYEPYCSSYSLSHAVLAVGYDTDSVTGKDYWIVANSWGLKWGDSGF 312

Query: 212 IKMARNRENNCGVASSASF 230
           IKMARNR N+CG+++ +S+
Sbjct: 313 IKMARNRGNHCGISTMSSY 331


>gi|344271939|ref|XP_003407794.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 335

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AFQY+K+N G+D+E SYPY A  S                               NC
Sbjct: 185 MDKAFQYVKNNGGLDSEESYPYTAKES------------------------------RNC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A + G+V+IP   E  L  AVA++GP+S+A+DAS +SF+FY  G+Y++P C 
Sbjct: 215 LYKPEFSAANNTGFVNIPP-QEKALMNAVASVGPISVAVDASLKSFRFYKSGIYFDPACR 273

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++H VLVVGYG   TD + N YWLVKNSW  +WG +GYIK+A++R
Sbjct: 274 -LAVNHGVLVVGYGFEGTDPDKNKYWLVKNSWGKSWGADGYIKIAKDR 320


>gi|327289213|ref|XP_003229319.1| PREDICTED: cathepsin S-like [Anolis carolinensis]
          Length = 333

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +  AFQY+  N+GID+E+SYPY                               T     C
Sbjct: 186 ISAAFQYVIYNNGIDSEASYPY-------------------------------TGQSGTC 214

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    YVD+P G+E  LK AVA  GPVS+AIDAS  SF  + +GVY +P C 
Sbjct: 215 RYNLQGRAATCSRYVDLPSGNEAALKDAVANFGPVSVAIDASRPSFFLFRKGVYDDPSCT 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  ++H VLVVGYGT E+G DYWLVKNSW  ++GD+GYIK+ARN
Sbjct: 275 SAHINHGVLVVGYGT-EDGIDYWLVKNSWGVSFGDQGYIKIARN 317


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  +F+YI    G+DTE+SYPY   +                                 C
Sbjct: 180 MTNSFEYIIAVGGLDTEASYPYTGEVG-------------------------------KC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ +   GA   GY ++  G E  L+ AVA   PVS+AIDAS  SFQ Y+ GVYYEPEC+
Sbjct: 209 KFNKKNIGATITGYKNVESGSESDLQTAVAA-QPVSVAIDASQSSFQLYASGVYYEPECS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQLDH VL VGYG+ ++G DYW+VKNSW   WG+ G+I MARN+
Sbjct: 268 STQLDHGVLAVGYGS-QSGQDYWIVKNSWGADWGENGFILMARNK 311


>gi|340370388|ref|XP_003383728.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 398

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +  AF+YI+   G ++E+ YPY                               T+ +  C
Sbjct: 250 LSTAFKYIESVAGEESETDYPY-------------------------------TAKNGTC 278

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  +K+ A   GY  +P GDE  L  AV + GP+S+ IDASH+SFQ YSEGVYYE  C+
Sbjct: 279 QYDPSKAVAKVTGYTALPSGDEDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKSCS 338

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VLVVGYGT++   DYWLVKNSW T+WG +GYI+M+RNR
Sbjct: 339 YFLLDHCVLVVGYGTEDTA-DYWLVKNSWGTSWGMKGYIRMSRNR 382


>gi|395844675|ref|XP_003795081.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 96/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF Y+K+N G+D+E SYPY A                                D+ C
Sbjct: 183 MNFAFNYVKENGGLDSEVSYPYVAR-------------------------------DEKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+V+IP   E  L  AVA IGP+SIAIDASH S QFY  G+YYEP C+
Sbjct: 212 KYKPEYSVANDTGFVNIPT-QEKALMKAVAIIGPISIAIDASHISIQFYKSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL++GY   GTD + N +W +KNSW   WG +G IK+A+++
Sbjct: 271 SKNLDHGVLLIGYGFEGTDSDDNKFWFIKNSWGIEWGLDGCIKIAKDK 318


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 94/168 (55%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQY+ D  G+D+E SYPY  ++                                 C
Sbjct: 183 IDNAFQYVLDVGGLDSEESYPYTGLVG-------------------------------TC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A + G+VD+P+  E  L  AVA +GP+S+A+DA + SFQFY  G+YYEP C+
Sbjct: 212 LYNPNNSAANETGFVDLPK-QEKALMKAVANLGPISVAVDAHNPSFQFYKSGIYYEPNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DHAVLVVGY   G D + N YWLVKNSW   WG  GYIKMA++R
Sbjct: 271 SESVDHAVLVVGYGFEGADSDDNKYWLVKNSWGEHWGMNGYIKMAKDR 318


>gi|426216524|ref|XP_004002512.1| PREDICTED: cathepsin S isoform 1 [Ovis aries]
          Length = 331

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 185 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGRC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDA   SF  Y  GVYY+P C 
Sbjct: 214 QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG+  NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 273 TQNVNHGVLVVGYGS-LNGKDYWLVKNSWGLNFGDQGYIRMARN 315


>gi|334362475|gb|AEG78436.1| cathepsin K [Epinephelus coioides]
          Length = 177

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+ DN GID+E +YPY                                  D  C
Sbjct: 29  MTNAFKYVVDNEGIDSEEAYPY-------------------------------IGQDQPC 57

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A  + Y ++PEG+E+ L  A+   GPVS+ IDA+  SFQFY++GVYY+  CN
Sbjct: 58  RYNSTGMAAQCKDYKEVPEGNEHALAIALFKHGPVSVGIDATLSSFQFYTKGVYYDRNCN 117

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VG+G +  G  YW+VKNSW  TWG++GYI MARNR
Sbjct: 118 KEDINHAVLAVGFGQNTKGKKYWIVKNSWGDTWGNKGYIMMARNR 162


>gi|432114311|gb|ELK36239.1| Cathepsin S [Myotis davidii]
          Length = 340

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 95/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 194 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    YV++P G+E  LK AVA  GPVS+AIDASH SF  Y  GVYY+  C 
Sbjct: 223 QYDVKNRAATCSKYVELPFGNEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDKAC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VL VGYG + NG DYWLVKNSW   +G++GYI+MARN
Sbjct: 282 TLNVNHGVLAVGYG-NYNGKDYWLVKNSWGLHFGEQGYIRMARN 324


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 95/165 (57%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 182 MTNAFQYVQQNRGIDSEDAYPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY ++P G+E  LK AVA +GP+S+AIDAS  SFQFYS+GVYY+  C+
Sbjct: 211 MYNPTGKAAKCRGYREVPVGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCD 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L+HAVL VGYG  + G+ +W++KNSW   WG++GY+ +ARN+
Sbjct: 271 GDNLNHAVLAVGYGI-QRGHKHWILKNSWGENWGNKGYVLLARNK 314


>gi|426216526|ref|XP_004002513.1| PREDICTED: cathepsin S isoform 2 [Ovis aries]
          Length = 281

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 135 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGRC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y+++P G E  LK AVA  GPVS+ IDA   SF  Y  GVYY+P C 
Sbjct: 164 QYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDAKQTSFFLYKTGVYYDPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG+  NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 223 TQNVNHGVLVVGYGS-LNGKDYWLVKNSWGLNFGDQGYIRMARN 265


>gi|45384464|ref|NP_990302.1| cathepsin K precursor [Gallus gallus]
 gi|25089842|sp|Q90686.1|CATK_CHICK RecName: Full=Cathepsin K; AltName: Full=JTAP-1; Flags: Precursor
 gi|1017831|gb|AAC59739.1| JTAP-1 [Gallus gallus]
          Length = 334

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 92/164 (56%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++ N GID+E +YPY                                  D++C
Sbjct: 187 MTNAFEYVRLNRGIDSEDAYPY-------------------------------IGQDESC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IPE +E  LK AVA IGPVS+ IDAS  SFQFYS GVYY+  CN
Sbjct: 216 MYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCN 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              ++HAVL VGYG  + G  +W++KNSW T WG++GY+ +ARN
Sbjct: 276 PENINHAVLAVGYGA-QKGTKHWIIKNSWGTEWGNKGYVLLARN 318


>gi|449268625|gb|EMC79478.1| Cathepsin K [Columba livia]
          Length = 304

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +  AF+Y++ N GID+E +YPY                                  D++C
Sbjct: 153 LTNAFEYVRQNRGIDSEDAYPY-------------------------------IGQDESC 181

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  RGY +IP G+E  LK AVA IGPVS+ IDAS  SFQFYS GVYY+  CN
Sbjct: 182 MYSPSGKAAKCRGYREIPPGNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDESCN 241

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++HAVL VGYG  + G  +W++KNSW   WG++GY+ +ARN
Sbjct: 242 AENINHAVLAVGYGA-QKGTKHWIIKNSWGEEWGNKGYVLLARN 284


>gi|2765360|emb|CAA74242.1| cathepsin L2 [Litopenaeus vannamei]
          Length = 111

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 73/95 (76%)

Query: 70  VDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVL 129
            D GYVD+  G E  L  AVATIGP+S+ IDAS  +F FY +GVY +  C+ST LDH VL
Sbjct: 1   TDTGYVDVEHGSESALMKAVATIGPISVGIDASRPTFHFYHDGVYSDKTCSSTHLDHGVL 60

Query: 130 VVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            VGYG DENG D+WLVKNSWNT+WG++GYIKM+RN
Sbjct: 61  AVGYGADENGGDFWLVKNSWNTSWGNKGYIKMSRN 95


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 96/165 (58%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E ++PY                                  D++C
Sbjct: 182 MTTAFQYVQQNGGIDSEDAFPY-------------------------------VGQDESC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GP+S++IDAS  SFQFYS GVYY+  C+
Sbjct: 211 MYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCD 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVLVVGYGT + G+ +W++KNSW  +WG++GY  +ARN+
Sbjct: 271 RDNVNHAVLVVGYGT-QKGSKHWIIKNSWGESWGNKGYALLARNK 314


>gi|308322193|gb|ADO28234.1| cathepsin K [Ictalurus furcatus]
          Length = 331

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y++DN GID+E +YPY                                  D  C
Sbjct: 183 MTNAFSYVRDNGGIDSEEAYPY-------------------------------VGQDQQC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y ++   A  R + ++ +G EY L +AVA +GPVS+ IDA   +FQFY  GVYY+P C+
Sbjct: 212 AYNKSGKAAECRRFKEVKKGSEYALASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCD 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  +W+VKNSW   WG +GY+ MARNR
Sbjct: 272 KESINHAVLAVGYGATPKGKKHWIVKNSWGEEWGMKGYVLMARNR 316


>gi|345320664|ref|XP_001521690.2| PREDICTED: cathepsin L1-like [Ornithorhynchus anatinus]
          Length = 388

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 96/168 (57%), Gaps = 33/168 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQYI +N GID+E  YPY A                     K + Q         C
Sbjct: 236 VDFAFQYILENRGIDSEDCYPYTA---------------------KDTAQ---------C 265

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K   + A   G+VDIP   E  L  AVAT+GPVS+AIDA   SF+FY  G++YEP+C+
Sbjct: 266 AFKPECATARVTGFVDIPPHSEEALMKAVATVGPVSVAIDAHPTSFRFYQSGIFYEPKCS 325

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +L+HAVLVVGY   G DE G  YW+VKNSW   WGD GY  ++++R
Sbjct: 326 SERLNHAVLVVGYGYEGEDEAGKKYWIVKNSWGKQWGDHGYFYLSKDR 373


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++DN GID+E +YPY                                  D  C
Sbjct: 184 MTNAFEYVRDNKGIDSEKAYPY-------------------------------VGEDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  +GY ++ EG+E  LK AVA +GPVS+ IDA   SFQFYS+GVYY+ +C+
Sbjct: 213 MYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VGYGT +    YW+VKNSW   WGD+GYI MA+++
Sbjct: 273 AEDINHAVLAVGYGTQKKAK-YWIVKNSWGEEWGDKGYILMAKDK 316


>gi|93279887|pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra-
           14009
          Length = 217

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A  R Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCRKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G++GYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEKGYIRMARNK 202


>gi|318065049|ref|NP_001187379.1| cathepsin K precursor [Ictalurus punctatus]
 gi|308322859|gb|ADO28567.1| cathepsin K [Ictalurus punctatus]
          Length = 331

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y++DN GID+E +YPY                                  D  C
Sbjct: 183 MTNAFSYVRDNGGIDSEEAYPY-------------------------------VGQDQQC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y ++   A  R + ++ +G EY L +AVA +GPVS+ IDA   +FQFY  GVYY+P C+
Sbjct: 212 AYNKSGKAAECRRFKEVKKGSEYALASAVAKVGPVSVGIDAMQSTFQFYKRGVYYDPNCD 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG    G  +W+VKNSW   WG +GY+ MARNR
Sbjct: 272 KESINHAVLAVGYGATPKGKKHWIVKNSWGEEWGMKGYVLMARNR 316


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++DN GID+E +YPY                                  D  C
Sbjct: 184 MTNAFEYVRDNKGIDSEKAYPY-------------------------------VGEDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  +GY ++ EG+E  LK AVA +GPVS+ IDA   SFQFYS+GVYY+ +C+
Sbjct: 213 MYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VGYGT +    YW+VKNSW   WGD+GYI MA+++
Sbjct: 273 AEDINHAVLAVGYGTQKKAK-YWIVKNSWGEEWGDKGYILMAKDK 316


>gi|47196671|emb|CAF89381.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 251

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 127/248 (51%), Gaps = 63/248 (25%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRR---------LCYLLTICHKRSNQV 51
           M  A+ Y+ +N G+++  +YPY +M+    +   RR         LC+L     ++  Q 
Sbjct: 51  MANAYDYVVNN-GLESTGTYPYTSMVRTALARHRRRRTAHPSSPVLCFL-----QQDTQ- 103

Query: 52  TVTSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSE 111
                   C Y   ++    R Y  IP+GDE  L  AVATIGP+++AIDASH SF FYS 
Sbjct: 104 -------PCYYDNKRAVGTIRDYRFIPKGDEQALADAVATIGPITVAIDASHSSFLFYSS 156

Query: 112 GVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPE 171
           G+Y E  CN   L HAVL+VGYG+ E G DYWL+KN W TT                   
Sbjct: 157 GIYEESNCNPNNLSHAVLLVGYGS-EGGQDYWLIKNRWGTT------------------- 196

Query: 172 CNSTQLDHAVLVVGYGTDENGNDYWLVKN-------SWNTTWGDEGYIKMARNRENNCGV 224
               Q   AV           ND++L+K        SW ++WG+ GY+++ R+ +N+CG+
Sbjct: 197 ---RQTAPAV----------ANDHFLIKTLCLFCFFSWGSSWGEGGYMRLIRDGKNSCGI 243

Query: 225 ASSASFPL 232
           AS A +P+
Sbjct: 244 ASYALYPM 251


>gi|60649669|gb|AAH90560.1| LOC594890 protein, partial [Xenopus (Silurana) tropicalis]
          Length = 355

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 94/161 (58%), Gaps = 33/161 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +F+YI DN GI+ ES+YPY+                                 D  C Y 
Sbjct: 212 SFRYIIDN-GIELESNYPYQGK-------------------------------DGKCSYT 239

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             K  +V   Y  +P GDE  LK  V  +GPVS+AIDAS ++F+ Y  GVYY+P C+S+ 
Sbjct: 240 PVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYYDPNCSSST 299

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            DH+VLVVGYG  E+G +YWLVKNSW T++GDEGYIKMARN
Sbjct: 300 PDHSVLVVGYGA-EDGVEYWLVKNSWGTSFGDEGYIKMARN 339


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 180 MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 209 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 268 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 310


>gi|61368403|gb|AAX43172.1| cathepsin S [synthetic construct]
          Length = 332

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|179959|gb|AAA35655.1| cathepsin [Homo sapiens]
 gi|248406|gb|AAB22005.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|23110962|ref|NP_004070.3| cathepsin S isoform 1 preproprotein [Homo sapiens]
 gi|88984046|sp|P25774.3|CATS_HUMAN RecName: Full=Cathepsin S; Flags: Precursor
 gi|60816153|gb|AAX36372.1| cathepsin S [synthetic construct]
 gi|61358282|gb|AAX41541.1| cathepsin S [synthetic construct]
 gi|119573903|gb|EAW53518.1| cathepsin S, isoform CRA_b [Homo sapiens]
 gi|119573904|gb|EAW53519.1| cathepsin S, isoform CRA_b [Homo sapiens]
          Length = 331

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|348542774|ref|XP_003458859.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 330

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 94/162 (58%), Gaps = 33/162 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYI+ N G+DTE SY YEA                                D  C Y 
Sbjct: 187 AFQYIRYNGGLDTEESYHYEAK-------------------------------DGQCHYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA   GYV++   ++  LK AVATIGP+S+AID S  SFQ Y  GVY EP C++  
Sbjct: 216 PDSVGAKCSGYVNVSPFED-ALKEAVATIGPISVAIDISRVSFQLYHSGVYDEPWCSNIN 274

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HAVL VGYGT ENG+DYWLVKNSW + WG++GYIKM RN+
Sbjct: 275 LNHAVLAVGYGT-ENGHDYWLVKNSWGSEWGNKGYIKMTRNK 315


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 197 MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 225

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 226 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 285 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 327


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++DN GID+E +YPY                                  D  C
Sbjct: 184 MTNAFEYVRDNKGIDSEKAYPY-------------------------------VGEDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  +GY ++ EG+E  LK AVA +GPVS+ IDA   SFQFYS+GVYY+ +C+
Sbjct: 213 MYNVSGRAAACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCS 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VGYGT +    YW+VKNSW   WGD+GYI MA+++
Sbjct: 273 AEDINHAVLAVGYGTQKKAK-YWIVKNSWGEEWGDKGYILMAKDK 316


>gi|221107099|ref|XP_002163116.1| PREDICTED: cathepsin L1-like, partial [Hydra magnipapillata]
          Length = 126

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 81/110 (73%), Gaps = 3/110 (2%)

Query: 58  DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEP 117
           ++C Y+   S A D G+VDIP G+E  LK AVATIGP+S+AIDAS  SF  Y  GVYYEP
Sbjct: 3   NDCFYQEEYSVASDTGFVDIPSGNENALKEAVATIGPISVAIDASKSSFASYKSGVYYEP 62

Query: 118 EC-NSTQ-LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            C N+ Q L H VLVVGYGT E G D+WLVKNSW   WGD+GYIKM+RN+
Sbjct: 63  TCGNAIQNLTHGVLVVGYGT-EKGRDFWLVKNSWGKKWGDQGYIKMSRNK 111


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 194 MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 223 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 282 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 324


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 196 MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 224

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 225 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 283

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 284 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 326


>gi|315075311|ref|NP_001186668.1| cathepsin S isoform 2 preproprotein [Homo sapiens]
 gi|194376464|dbj|BAG62991.1| unnamed protein product [Homo sapiens]
          Length = 281

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 135 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 164 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 223 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 266


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GI+ ++SYPY+A                                D+ C
Sbjct: 194 MTEAFQYIIDNGGIEADASYPYKAT-------------------------------DEKC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+ +P GDE  LK AVAT GPVS+ IDASH SF FY  GVY +P C 
Sbjct: 223 HYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 282 TGNVNHGVLVVGYGT-LDGKDYWLVKNSWGLNFGDQGYIRMARN 324


>gi|12803615|gb|AAH02642.1| Cathepsin S [Homo sapiens]
 gi|49456313|emb|CAG46477.1| CTSS [Homo sapiens]
 gi|60821573|gb|AAX36579.1| cathepsin S [synthetic construct]
 gi|189069420|dbj|BAG37086.1| unnamed protein product [Homo sapiens]
 gi|261858586|dbj|BAI45815.1| cathepsin S [synthetic construct]
          Length = 331

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|296228726|ref|XP_002759933.1| PREDICTED: cathepsin S isoform 1 [Callithrix jacchus]
          Length = 330

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+E+SYPY+AM                               D  C
Sbjct: 184 MTEAFQYIIDNKGIDSEASYPYKAM-------------------------------DQKC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPV + +DASH SF  Y  GVYY+P C 
Sbjct: 213 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHSSFFLYRSGVYYDPAC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLV+GYG D NG +YWLVKNSW + +G+ GYI+MARN+
Sbjct: 272 TQNVNHGVLVIGYG-DLNGEEYWLVKNSWGSNFGERGYIRMARNK 315


>gi|134025544|gb|AAI35768.1| LOC594890 protein [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 94/162 (58%), Gaps = 33/162 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +F+YI DN GI+ ES+YPY+                                 D  C Y 
Sbjct: 190 SFRYIIDN-GIELESNYPYQGK-------------------------------DGKCSYT 217

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             K  +V   Y  +P GDE  LK  V  +GPVS+AIDAS ++F+ Y  GVYY+P C+S+ 
Sbjct: 218 PVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYYDPNCSSST 277

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            DH+VLVVGYG  E+G +YWLVKNSW T++GDEGYIKMARN 
Sbjct: 278 PDHSVLVVGYGA-EDGVEYWLVKNSWGTSFGDEGYIKMARNH 318


>gi|350606375|ref|NP_001076821.2| uncharacterized protein LOC594890 precursor [Xenopus (Silurana)
           tropicalis]
          Length = 333

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 94/161 (58%), Gaps = 33/161 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +F+YI DN GI+ ES+YPY+                                 D  C Y 
Sbjct: 190 SFRYIIDN-GIELESNYPYQGK-------------------------------DGKCSYT 217

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             K  +V   Y  +P GDE  LK  V  +GPVS+AIDAS ++F+ Y  GVYY+P C+S+ 
Sbjct: 218 PVKKASVCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVYYDPNCSSST 277

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            DH+VLVVGYG  E+G +YWLVKNSW T++GDEGYIKMARN
Sbjct: 278 PDHSVLVVGYGA-EDGVEYWLVKNSWGTSFGDEGYIKMARN 317


>gi|332220183|ref|XP_003259237.1| PREDICTED: cathepsin S isoform 1 [Nomascus leucogenys]
          Length = 331

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P   E  LK AVA  GPVS+ +DASH SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYSREDVLKEAVANKGPVSVGVDASHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGRNFGEEGYIRMARNK 316


>gi|299856822|pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
 gi|299856823|pdb|3MPE|B Chain B, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
          Length = 220

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 72  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 101 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 159

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 160 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 203


>gi|119389039|pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human
           Procathepsin S
          Length = 315

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 169 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 197

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 198 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 256

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 257 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 300


>gi|260656357|pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As
           P1 Binding Elements
 gi|260656358|pdb|3IEJ|B Chain B, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As
           P1 Binding Elements
          Length = 222

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 73  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 101

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 102 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 160

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 161 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 204


>gi|208972992|dbj|BAG74345.1| silicatein-M4 [Ephydatia fluviatilis]
 gi|296168739|emb|CAQ54047.1| silicatein alpha 3 [Ephydatia muelleri]
          Length = 327

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 93/162 (57%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDT+SSYPY+                                   +C+Y 
Sbjct: 183 AFKYVVDNGGIDTDSSYPYKGKQY-------------------------------SCQYN 211

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GAV  G V I  G E  L +AVA++GP+++A+DA+  SF FY  GV+    C++T+
Sbjct: 212 SKNLGAVATGVVKITSGSETDLLSAVASVGPIAVAVDATVNSFMFYQSGVFDSSSCSTTK 271

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW T WG+ GYIKM RN+
Sbjct: 272 LNHAMLVTGYGS-TNGKDYWLVKNSWGTGWGESGYIKMVRNK 312


>gi|294662444|pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3
           Inhibitor
 gi|294662445|pdb|3KWN|B Chain B, Cathepsin S In Complex With Thioether Acetamide P3
           Inhibitor
 gi|299856824|pdb|3MPF|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
 gi|299856825|pdb|3MPF|B Chain B, Crystal Structure Of Human Cathepsin-S C25s Mutant With
           Bound Drug
          Length = 219

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 202


>gi|93279396|pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent
           2-(Benzoxazol-2-Ylamino)- Acetamide
 gi|93279397|pdb|2F1G|B Chain B, Cathepsin S In Complex With Non-Covalent
           2-(Benzoxazol-2-Ylamino)- Acetamide
 gi|114794366|pdb|2HH5|B Chain B, Crystal Structure Of Cathepsin S In Complex With A Zinc
           Mediated Non-Covalent Arylaminoethyl Amide
 gi|114794367|pdb|2HH5|A Chain A, Crystal Structure Of Cathepsin S In Complex With A Zinc
           Mediated Non-Covalent Arylaminoethyl Amide
 gi|118137884|pdb|2H7J|A Chain A, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor.
 gi|118137885|pdb|2H7J|B Chain B, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor.
 gi|118138002|pdb|2HXZ|A Chain A, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|118138003|pdb|2HXZ|B Chain B, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|118138004|pdb|2HXZ|C Chain C, Crystal Structure Of Cathepsin S In Complex With A
           Nonpeptidic Inhibitor (hexagonal Spacegroup)
 gi|149241966|pdb|2HHN|A Chain A, Cathepsin S In Complex With Non Covalent Arylaminoethyl
           Amide.
 gi|149241967|pdb|2HHN|B Chain B, Cathepsin S In Complex With Non Covalent Arylaminoethyl
           Amide.
 gi|149242657|pdb|2OP3|A Chain A, The Structure Of Cathepsin S With A Novel 2-
           Arylphenoxyacetaldehyde Inhibitor Derived By The
           Substrate Activity Screening (Sas) Method
 gi|149242658|pdb|2OP3|B Chain B, The Structure Of Cathepsin S With A Novel 2-
           Arylphenoxyacetaldehyde Inhibitor Derived By The
           Substrate Activity Screening (Sas) Method
          Length = 220

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 74  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 102

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 103 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 161

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 162 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 205


>gi|47213724|emb|CAF95155.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 90/165 (54%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  N G+D+E++YPY                                  +  C
Sbjct: 188 MTNAFKYVATNKGLDSEAAYPY-------------------------------VGQEQPC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK A      R Y ++P+G+E  L  A+   GPV+I IDA+  +F  YS+GVYY+P+CN
Sbjct: 217 QYKEAGKAVECRRYEEVPQGNEKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYDPDCN 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL+VGYG    G  YW+VKNSW T WG EGYI MARNR
Sbjct: 277 PEDINHAVLLVGYGVTRRGQQYWIVKNSWGTGWGTEGYILMARNR 321


>gi|221106297|ref|XP_002169520.1| PREDICTED: cathepsin L1-like [Hydra magnipapillata]
          Length = 147

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 80/110 (72%), Gaps = 3/110 (2%)

Query: 58  DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEP 117
           ++C Y+   S A D G+VDIP G+E  LK AVATIGP+S+ IDAS  SF  Y  GVYYEP
Sbjct: 24  NDCYYQEEYSVASDTGFVDIPSGNENALKEAVATIGPISVTIDASKSSFASYKSGVYYEP 83

Query: 118 EC-NSTQ-LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            C N+ Q L H VLVVGYGT E G D+WLVKNSW   WGD+GYIKM+RN+
Sbjct: 84  TCGNAIQNLTHGVLVVGYGT-EKGRDFWLVKNSWGKMWGDQGYIKMSRNK 132


>gi|315364646|pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An
           Aldehyde Warhead
 gi|315364647|pdb|3OVX|B Chain B, Cathepsin S In Complex With A Covalent Inhibitor With An
           Aldehyde Warhead
          Length = 218

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 72  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 101 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 159

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 160 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 203


>gi|205689966|sp|A6NFJ7.3|CATL6_HUMAN RecName: Full=Putative cathepsin L-like protein 6
          Length = 277

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 36/169 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F+Y+++N G+D+E+SYPYE  +                                 C
Sbjct: 126 MDNPFRYVQENGGLDSEASYPYEGKVK-------------------------------TC 154

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    S A D G+VDIP   E  L  AVAT+GP+S+A  ASH SFQFY +G+Y+EP C+
Sbjct: 155 RYNPKYSAANDTGFVDIPS-QEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRCD 213

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKN-SWNTTWGDEGYIKMARNR 165
              LDHA+L+VGY   G D + N YWLVKN S    WG +GYIKMA++R
Sbjct: 214 PEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKDR 262


>gi|300508731|pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As
           Cathepsin S Inhibitors: N3, Not N1 Is Critically
           Important
 gi|300508732|pdb|3N3G|B Chain B, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As
           Cathepsin S Inhibitors: N3, Not N1 Is Critically
           Important
 gi|327533626|pdb|3N4C|A Chain A, 6-Phenyl-1h-Imidazo[4,5-C]pyridine-4-Carbonitrile As
           Cathepsin S Inhibitors
 gi|327533627|pdb|3N4C|B Chain B, 6-Phenyl-1h-Imidazo[4,5-C]pyridine-4-Carbonitrile As
           Cathepsin S Inhibitors
          Length = 217

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 202


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 36/169 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI+ N GID+E+SYPYEA                                +  C
Sbjct: 177 MDNAFKYIEANGGIDSEASYPYEAK-------------------------------NGKC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++++   A   GY DIP  D   L+ AVA +GP+S+A+DASH SFQ Y+ GVY    C+
Sbjct: 206 RFQQSAVAATCTGYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLYAAGVYDPLLCS 265

Query: 121 STQLDHAVLVVGYGTDENG-----NDYWLVKNSWNTTWGDEGYIKMARN 164
           ST+LDH VL VGYGT+ +G       YWLVKNSW   WG +GY K+ R 
Sbjct: 266 STRLDHGVLAVGYGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRK 314


>gi|30749675|pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes
 gi|30749676|pdb|1NPZ|B Chain B, Crystal Structures Of Cathepsin S Inhibitor Complexes
 gi|30749688|pdb|1NQC|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes
          Length = 217

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 202


>gi|208972988|dbj|BAG74343.1| silicatein-M2 [Ephydatia fluviatilis]
          Length = 326

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 93/162 (57%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 182 AFKYVIDNGGIDTESSYSFKGKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L AAVAT+GPV++AIDA+  +F+FY  GV+    C+ST+
Sbjct: 211 NKTSGASATGVVSIAYGSENDLLAAVATVGPVAVAIDANTNAFRFYQSGVFDSSSCSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDSGYILMVRNK 311


>gi|30749499|pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S.
 gi|163310952|pdb|2R9M|A Chain A, Cathepsin S Complexed With Compound 15
 gi|163310953|pdb|2R9M|B Chain B, Cathepsin S Complexed With Compound 15
 gi|163310954|pdb|2R9N|A Chain A, Cathepsin S Complexed With Compound 26
 gi|163310955|pdb|2R9N|B Chain B, Cathepsin S Complexed With Compound 26
 gi|163310956|pdb|2R9O|A Chain A, Cathepsin S Complexed With Compound 8
 gi|163310957|pdb|2R9O|B Chain B, Cathepsin S Complexed With Compound 8
          Length = 222

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 202


>gi|93279711|pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor
 gi|93279712|pdb|2FQ9|B Chain B, Cathepsin S With Nitrile Inhibitor
 gi|112490596|pdb|2FRA|A Chain A, Human Cathepsin S With Cra-27934, A Nitrile Inhibitor
 gi|112490597|pdb|2FRA|B Chain B, Human Cathepsin S With Cra-27934, A Nitrile Inhibitor
 gi|112490599|pdb|2FRQ|A Chain A, Human Cathepsin S With Inhibitor Cra-26871
 gi|112490600|pdb|2FRQ|B Chain B, Human Cathepsin S With Inhibitor Cra-26871
 gi|112490616|pdb|2FT2|A Chain A, Human Cathepsin S With Inhibitor Cra-29728
 gi|112490617|pdb|2FT2|B Chain B, Human Cathepsin S With Inhibitor Cra-29728
 gi|112490630|pdb|2FUD|A Chain A, Human Cathepsin S With Inhibitor Cra-27566
 gi|112490631|pdb|2FUD|B Chain B, Human Cathepsin S With Inhibitor Cra-27566
 gi|114793976|pdb|2G7Y|A Chain A, Human Cathepsin S With Inhibitor Cra-16981
 gi|114793977|pdb|2G7Y|B Chain B, Human Cathepsin S With Inhibitor Cra-16981
          Length = 225

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 72  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DQKC 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 101 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 159

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 160 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 203


>gi|340368362|ref|XP_003382721.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 31/163 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYIKD  G DTE SYPY                               T+ +++C
Sbjct: 180 MRSAFQYIKDAGGDDTEESYPY-------------------------------TAKNESC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+   K GA D GYV IP GDE  L  A+  +GP+S+A+DA  ++FQFY +G+Y +  C+
Sbjct: 209 RFDPKKVGATDEGYVRIPSGDEVSLMHALYEVGPISVAMDAGLKTFQFYKKGIYSDYLCS 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           +T L+H V ++GYG   +G+ YWLVKNSW   WG +GY  +AR
Sbjct: 269 NTHLNHGVTLIGYGESSDGSPYWLVKNSWGKDWGIDGYFMLAR 311


>gi|12845037|dbj|BAB26594.1| unnamed protein product [Mus musculus]
 gi|148709356|gb|EDL41302.1| RIKEN cDNA 2310051M13 [Mus musculus]
          Length = 137

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)

Query: 55  SGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVY 114
           S +  CRY    S A   G+V++ +  E  L  AVAT+GP+S+ ID  H+SFQFY EG+Y
Sbjct: 13  SKNGTCRYNPKNSAATVTGFVNV-QSSEDALMKAVATVGPISVGIDTKHKSFQFYKEGMY 71

Query: 115 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           YEP+C+ST LDHAVLVVGYG + +G  YWLVKNSW   WG  GYIKMA++R
Sbjct: 72  YEPDCSSTVLDHAVLVVGYGEESDGRKYWLVKNSWGRDWGMNGYIKMAKDR 122


>gi|179957|gb|AAC37592.1| cathepsin S [Homo sapiens]
          Length = 331

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DLKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|37905511|gb|AAO64477.1| cathepsin S precursor [Fundulus heteroclitus]
          Length = 337

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+E SYPY                                  D  C
Sbjct: 191 MHKAFQYVIDNQGIDSEDSYPYRGR-------------------------------DQQC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A   A    Y  +PEGDE  LK A+ATIGP+S+AIDA    F FY  GVY +  C 
Sbjct: 220 QYNPATRAANCSRYDFLPEGDEQALKEAIATIGPISVAIDARRPRFAFYRSGVYDDSSC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VGYG+   G DYWLVKNSW T++GD+GYI+MARN+
Sbjct: 279 TQNVNHAVLAVGYGS-LGGQDYWLVKNSWGTSFGDQGYIRMARNK 322


>gi|18251953|gb|AAL66176.1|AF458078_1 cathepsin L [Oryctolagus cuniculus]
          Length = 167

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 87/151 (57%), Gaps = 35/151 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPYE M                               D  C
Sbjct: 47  MDYAFQYVKDNSGLDSEESYPYEGM-------------------------------DGTC 75

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDIP G E  L  AVAT+GP+S AIDA H SFQFY  G+YY+P+C+
Sbjct: 76  KYKPECSVANDTGFVDIP-GHEKALLRAVATVGPISAAIDAGHMSFQFYKSGIYYDPDCS 134

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNS 148
           S  LDH +LVVGY   GT+ N   YWLVKNS
Sbjct: 135 SKDLDHGILVVGYGFEGTNSNATKYWLVKNS 165


>gi|157278117|ref|NP_001098157.1| cathepsin S precursor [Oryzias latipes]
 gi|50251130|dbj|BAD27582.1| cathepsin S [Oryzias latipes]
          Length = 327

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+  N GI ++++YPY                       KR          D C
Sbjct: 181 MSNAFQYVIKNQGISSDAAYPYIG---------------------KR----------DKC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A   GY  +P+GDE+ LK  VATIGP+S+AIDAS   F FY  GVY +  C 
Sbjct: 210 KYDSKHRAANCTGYNFLPKGDEFALKVGVATIGPISVAIDASRPKFLFYRHGVYKDHSC- 268

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++H VLVVGYGT ENG DYWLVKNSW   +GD GYIKMARNR
Sbjct: 269 SHNVNHGVLVVGYGT-ENGEDYWLVKNSWGERYGDGGYIKMARNR 312


>gi|432910514|ref|XP_004078393.1| PREDICTED: cathepsin S-like [Oryzias latipes]
          Length = 339

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID+++ YPY                            V VT    NC
Sbjct: 193 MHQAFQYVIDNQGIDSDAGYPY----------------------------VGVT---QNC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y  +PEGDE  LK A+ATIGP+S+AIDA+   F FY  GVY +  C 
Sbjct: 222 HYSSEYRAANCSQYSFLPEGDEGALKEAIATIGPISVAIDATRPRFAFYRSGVYDDSSC- 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++H VL VGYGT  NG DYWLVKNSW TT+G++GYI+MARN+
Sbjct: 281 SQNVNHGVLAVGYGT-LNGQDYWLVKNSWGTTFGEQGYIRMARNK 324


>gi|375340657|emb|CBJ56264.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID+++SYPY                               T  +  C
Sbjct: 191 MHQAFQYVIDNQGIDSDASYPY-------------------------------TGRNGEC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y  +PEG+E  LK A+A IGP+S+AIDA+  +F FY  GVY +P C 
Sbjct: 220 RYNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL VGYGT  +G DYWLVKNSW  T+GD+GYI+M+RN+
Sbjct: 279 SQKVNHGVLAVGYGT-LDGQDYWLVKNSWGKTFGDQGYIRMSRNK 322


>gi|403302730|ref|XP_003942006.1| PREDICTED: cathepsin S isoform 1 [Saimiri boliviensis boliviensis]
          Length = 339

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+E+SYPY+A                                D  C
Sbjct: 193 MTEAFQYIIDNKGIDSEASYPYKAT-------------------------------DQKC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPV + +DASH SF  Y  GVYY+P C 
Sbjct: 222 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC- 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VLV+GYG D NG +YWLVKNSW + +G++GYI+MARN+
Sbjct: 281 TQKVNHGVLVIGYG-DLNGKEYWLVKNSWGSNFGEQGYIRMARNK 324


>gi|410990010|ref|XP_004001243.1| PREDICTED: cathepsin L1 isoform 2 [Felis catus]
          Length = 337

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 98/168 (58%), Gaps = 31/168 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQY+KDN G+D+E SYPY A +        +R  Y                   +C
Sbjct: 183 IDDAFQYVKDNGGLDSEESYPYHAQV--------KRASY-------------------SC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A    Y DIP   E +L   +A +GP+S AIDAS  +F+FY EG+YY+P C+
Sbjct: 216 KYRPENSVANVTDYWDIPS-KENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCS 274

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGY   GT+     YW++KNSW T WG +GYIKMA++R
Sbjct: 275 SEDVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKDR 322


>gi|62510453|sp|Q8HY82.1|CATS_SAIBB RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497536|gb|AAO13008.1| cathepsin S preproprotein [Saimiri boliviensis]
          Length = 330

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+E+SYPY+A                                D  C
Sbjct: 184 MTEAFQYIIDNKGIDSEASYPYKAT-------------------------------DQKC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPV + +DASH SF  Y  GVYY+P C 
Sbjct: 213 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VLV+GYG D NG +YWLVKNSW + +G++GYI+MARN+
Sbjct: 272 TQKVNHGVLVIGYG-DLNGKEYWLVKNSWGSNFGEQGYIRMARNK 315


>gi|403302732|ref|XP_003942007.1| PREDICTED: cathepsin S isoform 2 [Saimiri boliviensis boliviensis]
          Length = 289

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+E+SYPY+A                                D  C
Sbjct: 143 MTEAFQYIIDNKGIDSEASYPYKAT-------------------------------DQKC 171

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPV + +DASH SF  Y  GVYY+P C 
Sbjct: 172 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC- 230

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VLV+GYG D NG +YWLVKNSW + +G++GYI+MARN+
Sbjct: 231 TQKVNHGVLVIGYG-DLNGKEYWLVKNSWGSNFGEQGYIRMARNK 274


>gi|308321226|gb|ADO27765.1| cathepsin S [Ictalurus furcatus]
          Length = 329

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ D+ GID++ +YPY AM                               D  C
Sbjct: 183 MTQAFQYVIDDGGIDSDEAYPYTAM-------------------------------DGQC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +++  A    Y  + EGDE  LK AVATIGP+S+AIDA+   F  Y  GVY +P C 
Sbjct: 212 RYDQSQRAANCSSYNYVSEGDEEALKQAVATIGPISVAIDATRPMFILYHSGVYSDPTC- 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG+  NG DYWLVKNSW T +GD GYI++ARN+
Sbjct: 271 TQNVNHGVLVVGYGS-LNGEDYWLVKNSWGTRFGDGGYIRIARNK 314


>gi|23200070|pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S
          Length = 217

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM                               D  C
Sbjct: 71  MTTAFQYIIDNKGIDSDASYPYKAM-------------------------------DLKC 99

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 100 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 158

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 159 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 202


>gi|47191670|emb|CAF89137.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 312

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 89/150 (59%), Gaps = 33/150 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E+SYPY                              + + D  C
Sbjct: 192 MDQAFQYIKDNGGLDSEASYPY------------------------------LATDDQPC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  + + A + G+VD+P G E  L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 222 HYDPSNNSANETGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 281

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKN 147
           S +LDH VLVVGY   G D +G  +W+VKN
Sbjct: 282 SEELDHGVLVVGYGFQGEDVDGKKFWIVKN 311


>gi|47199802|emb|CAF88807.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 261

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 89/150 (59%), Gaps = 33/150 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQYIKDN G+D+E+SYPY                              + + D  C
Sbjct: 142 MDQAFQYIKDNGGLDSEASYPY------------------------------LATDDQPC 171

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  + + A + G+VD+P G E  L  AVA++GPVS+AIDA H+SFQFY  G+YYE EC+
Sbjct: 172 HYDPSNNSANETGFVDVPSGSERALMKAVASVGPVSVAIDAGHESFQFYQSGIYYEKECS 231

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKN 147
           S +LDH VLVVGY   G D +G  +W+VKN
Sbjct: 232 SEELDHGVLVVGYGFQGEDVDGKKFWIVKN 261


>gi|118404242|ref|NP_001072435.1| cathepsin K precursor [Xenopus (Silurana) tropicalis]
 gi|113197688|gb|AAI21683.1| hypothetical protein MGC147539 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++DN GID+E++YPY                                  D  C
Sbjct: 184 MTNAFEYVRDNKGIDSENAYPY-------------------------------VGEDQEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  +G+ ++ EG E  LK AV  +GPVS+ IDA   SFQFYS+GVYY+ +CN
Sbjct: 213 MYNATGKAASCKGFKEVQEGSEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDKDCN 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VGYGT +    YW+VKNSW   WG++GYI MAR +
Sbjct: 273 AENINHAVLAVGYGTQKK-TKYWIVKNSWGEDWGNKGYILMAREK 316


>gi|84660244|emb|CAI43319.1| silicatein alpha [Lubomirskia baicalensis]
 gi|85677148|emb|CAI46306.1| silicatein alpha [Lubomirskia baicalensis]
 gi|220675708|emb|CAP69653.1| silcatein [Lubomirskia baicalensis]
          Length = 326

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 93/162 (57%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 182 AFKYVIDNGGIDTESSYSFKGKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 211 NKTSGASATGVVSIGYGSESDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDSGYILMVRNK 311


>gi|223673161|gb|ACN12762.1| Cathepsin S precursor [Salmo salar]
          Length = 330

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GI ++ SYPY+ +                                  C
Sbjct: 184 MTKAFQYVIDNQGIASDQSYPYKGV-------------------------------QQQC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A+  A    Y  +PEGDE  LK A+ATIGP+S+ IDA+  SF FY  GVY +P C 
Sbjct: 213 IYNPAQRAANCSRYSFLPEGDEGVLKEALATIGPISVGIDATRPSFAFYRSGVYNDPTC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + + +HAVL VGYGT   G DYWLVKNSW  +WGD+GYI+M+RN+
Sbjct: 272 TKKTNHAVLAVGYGT-LGGQDYWLVKNSWGLSWGDQGYIRMSRNK 315


>gi|330805277|ref|XP_003290611.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
 gi|325079250|gb|EGC32859.1| hypothetical protein DICPUDRAFT_81345 [Dictyostelium purpureum]
          Length = 330

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 94/164 (57%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF++I    G+ TE SYPY A+                                  C
Sbjct: 183 MVNAFKFIMSQGGVATEDSYPYNAVQG-------------------------------KC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ ++  GA   GY +I +G E +L+AA+ T  PVSIAIDAS QSFQ Y  GVY EPEC+
Sbjct: 212 KFTKSMVGANISGYKEITQGSELELQAAL-TKQPVSIAIDASQQSFQLYKSGVYDEPECS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S QLDH VL VGYGT ENG DY++VKNSW  +WG +GYI M+RN
Sbjct: 271 SYQLDHGVLAVGYGT-ENGKDYYIVKNSWADSWGQDGYIFMSRN 313


>gi|929719|emb|CAA27980.1| unnamed protein product [Mus musculus]
          Length = 212

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 35/150 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK+N G+D+E SYPYEA                                D +C
Sbjct: 95  MDFAFQYIKENGGLDSEESYPYEAK-------------------------------DGSC 123

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   + A D G+VDIP+  E  L  AVAT+GP+S+A+DASH S QFYS G+YYEP C+
Sbjct: 124 KYRAEFAVANDTGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCS 182

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKN 147
           S  LDH VL+VGY   GTD N N YWLVKN
Sbjct: 183 SKNLDHGVLLVGYGYEGTDSNKNKYWLVKN 212


>gi|312386081|gb|ADQ74585.1| silicatein alpha 2 [Lubomirskia baicalensis]
          Length = 326

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 91/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY +    S                               +C+Y 
Sbjct: 182 AIKYVVDNGGIDTESSYSFRGKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V IP G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 211 SKNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDNGYIMMVRNK 311


>gi|94448666|emb|CAI91571.1| silicatein a2 [Lubomirskia baicalensis]
          Length = 326

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 91/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY +    S                               +C+Y 
Sbjct: 182 AIKYVVDNGGIDTESSYSFRGKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V IP G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 211 SKNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDNGYIMMVRNK 311


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 96/165 (58%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI DN GI +ES+YPY AM                               D NC
Sbjct: 183 MDSAFDYIHDN-GIMSESAYPYTAM-------------------------------DGNC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S    +GY DIP GDE  L+ AVA  GPV++A+DA+ +  Q YS GV Y+  C+
Sbjct: 211 RFDASQSVTSLQGYYDIPSGDESALQDAVANNGPVAVALDATEE-LQLYSGGVLYDTTCS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  L+H VLVVGYG+ E G DYW+VKNSW + WG++GY + ARNR
Sbjct: 270 AQALNHGVLVVGYGS-EGGQDYWIVKNSWGSGWGEQGYWRQARNR 313


>gi|346574373|gb|AEO36958.1| silicatein-alpha 1 [Baikalospongia fungiformis]
          Length = 324

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 93/162 (57%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 180 AFKYVIDNGGIDTESSYSFKGKQS-------------------------------SCQYN 208

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 209 NKTSGASATGVVSIGYGSESDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSSTK 268

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWL+KNSW+  WGD GYI M RN+
Sbjct: 269 LNHAMLVTGYGS-YNGKDYWLIKNSWSKNWGDSGYILMVRNK 309


>gi|342305192|dbj|BAK55650.1| cathepsin S [Oplegnathus fasciatus]
          Length = 337

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+++SYPY                               T     C
Sbjct: 191 MHRAFQYVIDNQGIDSDASYPY-------------------------------TGQSQQC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A    Y  +PEGDE  LK A+ATIGP+S+AIDA+  SF FY  GVY +  C 
Sbjct: 220 HYNPAYRAANCSRYSFLPEGDEGALKEALATIGPISVAIDATRPSFTFYRSGVYDDQTC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VL VGYGT  NG DYWLVKNSW +T+GD+G+I+MARN+
Sbjct: 279 TRNVNHGVLAVGYGT-LNGKDYWLVKNSWGSTFGDKGFIRMARNK 322


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN+GID+E+SYPY+A                                D  C
Sbjct: 185 MTSAFQYIIDNNGIDSEASYPYKAQ-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYY+  C 
Sbjct: 214 QYDSKFRAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 273 TLKVNHGVLVVGYG-NLDGKDYWLVKNSWGLNFGDKGYIRMARN 315


>gi|330793420|ref|XP_003284782.1| hypothetical protein DICPUDRAFT_28222 [Dictyostelium purpureum]
 gi|325085276|gb|EGC38686.1| hypothetical protein DICPUDRAFT_28222 [Dictyostelium purpureum]
          Length = 347

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 95/184 (51%), Gaps = 50/184 (27%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI +N GIDTESSYPY A                                   C
Sbjct: 180 MTLAFEYIINNKGIDTESSYPYTA------------------------------KDGKTC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A  GA    Y ++  G E  L++A A IGPVS+AIDASH SFQ YS G+YYEP C+
Sbjct: 210 KYNPANIGATLSSYSNVTSGSEPSLESA-ANIGPVSVAIDASHNSFQLYSSGIYYEPACS 268

Query: 121 STQLDHAVLVVGYGT-------------------DENGNDYWLVKNSWNTTWGDEGYIKM 161
           +T LDH VLVVGY +                     +  +YW+VKNSW T+WG EGYI M
Sbjct: 269 TTSLDHGVLVVGYASGSGSGSGSGSGSGSGLAVEGASSGNYWIVKNSWGTSWGIEGYILM 328

Query: 162 ARNR 165
           +++R
Sbjct: 329 SKDR 332


>gi|410990008|ref|XP_004001242.1| PREDICTED: cathepsin L1 isoform 1 [Felis catus]
          Length = 333

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQY+KDN G+D+E SYPY A                                 D+C
Sbjct: 183 IDDAFQYVKDNGGLDSEESYPYHAQ-------------------------------GDSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A    Y DIP   E +L   +A +GP+S AIDAS  +F+FY EG+YY+P C+
Sbjct: 212 KYRPENSVANVTDYWDIPS-KENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGY   GT+     YW++KNSW T WG +GYIKMA++R
Sbjct: 271 SEDVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKDR 318


>gi|354473025|ref|XP_003498737.1| PREDICTED: cathepsin S-like [Cricetulus griseus]
          Length = 341

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 93/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN GID+++SYPY+A+                                + C
Sbjct: 195 MTRAFQYIIDNGGIDSDASYPYKAVA-------------------------------EKC 223

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y+++P GDE  LK AVA  GPVS+ IDASH SF  Y  GVY EP C 
Sbjct: 224 HYDSKSRAATCSRYMELPSGDEEALKEAVANKGPVSVGIDASHPSFFLYKSGVYDEPSC- 282

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 283 TENVNHGVLVVGYG-NLDGKDYWLVKNSWGLHFGDQGYIRMARN 325


>gi|463046|gb|AAA49207.1| cysteine proteinase [Cyprinus carpio]
          Length = 331

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN GID+ESSYPYE +                                  C
Sbjct: 184 MSAAFQYVIDNGGIDSESSYPYEGVQG-------------------------------QC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  ++  A    Y  + +GDE  LK AVA IGP+S+AIDA+H  F  Y  GVY +P C 
Sbjct: 213 RYNPSQLAANCTKYYYVRQGDEEALKQAVANIGPISVAIDATHPQFILYRSGVYNDPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T ++HAVL VGYG    G D+WLVKNSW T +GD GYI+MARN+
Sbjct: 272 TTNINHAVLAVGYGAIA-GQDFWLVKNSWGTGFGDGGYIRMARNQ 315


>gi|355558399|gb|EHH15179.1| hypothetical protein EGK_01236 [Macaca mulatta]
 gi|380809986|gb|AFE76868.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416071|gb|AFH31249.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416073|gb|AFH31250.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416075|gb|AFH31251.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416077|gb|AFH31252.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
 gi|383416079|gb|AFH31253.1| cathepsin S isoform 1 preproprotein [Macaca mulatta]
          Length = 331

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+++SYPY+A                                D  C
Sbjct: 185 MTRAFQYIIDNNGIDSDASYPYKAT-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK  VA  GPVS+ +DASH SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG   NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYGV-LNGKEYWLVKNSWGRNFGEEGYIRMARNK 316


>gi|355763133|gb|EHH62119.1| hypothetical protein EGM_20318 [Macaca fascicularis]
          Length = 331

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+++SYPY+A                                D  C
Sbjct: 185 MTRAFQYIIDNNGIDSDASYPYKAT-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK  VA  GPVS+ +DASH SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG   NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYGV-LNGKEYWLVKNSWGRNFGEEGYIRMARNK 316


>gi|114559418|ref|XP_001171268.1| PREDICTED: cathepsin S isoform 3 [Pan troglodytes]
 gi|397492866|ref|XP_003817341.1| PREDICTED: cathepsin S isoform 1 [Pan paniscus]
 gi|410225070|gb|JAA09754.1| cathepsin S [Pan troglodytes]
 gi|410251608|gb|JAA13771.1| cathepsin S [Pan troglodytes]
 gi|410328325|gb|JAA33109.1| cathepsin S [Pan troglodytes]
 gi|410328327|gb|JAA33110.1| cathepsin S [Pan troglodytes]
          Length = 331

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+A                                D  C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAT-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 316


>gi|47213723|emb|CAF95154.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 334

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   FQY+ DNHGID+E+SYPY                               T  +  C
Sbjct: 190 MHHTFQYVIDNHGIDSEASYPY-------------------------------TGQEGVC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A   A    Y  + +GDE  L+ AVATIGP+S+ IDA+   F +Y  GVY +P C+
Sbjct: 219 RYNPAFRAANCSHYWFLRQGDEGALQEAVATIGPISVGIDATRHQFVYYRSGVYNDPGCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T ++HAVL VGYGTD NG DYWLVKNSW   +G++GYI+MARN+
Sbjct: 279 QT-VNHAVLAVGYGTD-NGQDYWLVKNSWGVGFGEDGYIRMARNK 321


>gi|296168728|emb|CAQ54044.1| silicatein alpha 4 [Baikalospongia intermedia]
          Length = 197

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 92/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 53  AMKYVIDNGGIDTESSYSFQGKQS-------------------------------SCQYS 81

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G + I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C++T+
Sbjct: 82  SKNSGASATGVISIASGSETDLFAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSNTK 141

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 142 LNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDNGYIMMVRNK 182


>gi|380236892|emb|CBK52289.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN GID+++SYPY                               T  +  C
Sbjct: 191 MHHAFQYVIDNQGIDSDASYPY-------------------------------TGRNGEC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY      A    Y  +PEG+E  LK A+A IGP+S+AIDA+  +F FY  GVY +P C 
Sbjct: 220 RYNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSGVYNDPNC- 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL VGYGT  +G DYWLVKNSW  T+GD+GYI+M+RN+
Sbjct: 279 SQKVNHGVLAVGYGT-LDGQDYWLVKNSWGKTFGDQGYIRMSRNK 322


>gi|114559420|ref|XP_001171183.1| PREDICTED: cathepsin S isoform 1 [Pan troglodytes]
 gi|397492868|ref|XP_003817342.1| PREDICTED: cathepsin S isoform 2 [Pan paniscus]
          Length = 281

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+A                                D  C
Sbjct: 135 MTTAFQYIIDNKGIDSDASYPYKAT-------------------------------DQKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 164 QYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDALHPSFFLYRSGVYYEPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 223 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNK 266


>gi|402856105|ref|XP_003892640.1| PREDICTED: cathepsin S isoform 1 [Papio anubis]
          Length = 331

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+++SYPY+A                                D  C
Sbjct: 185 MTRAFQYIIDNNGIDSDASYPYKAT-------------------------------DQKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK  VA  GPVS+ +DASH SF  Y  GVYYEP C 
Sbjct: 214 QYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG   NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 273 TQNVNHGVLVVGYGV-LNGKEYWLVKNSWGRNFGEEGYIRMARNK 316


>gi|148706871|gb|EDL38818.1| cathepsin K, isoform CRA_b [Mus musculus]
          Length = 245

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 32/161 (19%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
            QY++ N GID+E +YPY                                  D++C Y  
Sbjct: 102 IQYVQQNGGIDSEDAYPY-------------------------------VGQDESCMYNA 130

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
               A  RGY +IP G+E  LK AVA +GP+S++IDAS  SFQFYS GVYY+  C+   +
Sbjct: 131 TAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNV 190

Query: 125 DHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +HAVLVVGYGT + G+ +W++KNSW  +WG++GY  +ARN+
Sbjct: 191 NHAVLVVGYGT-QKGSKHWIIKNSWGESWGNKGYALLARNK 230


>gi|281204231|gb|EFA78427.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 329

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 90/165 (54%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD A  YI    GI+TE SYPYE   S+                               C
Sbjct: 181 MDSAMSYIVKQGGINTEESYPYEMRDSY------------------------------TC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A +GA   GY +I  G E  L AA   IGPV+IA+DASH SFQ Y  GV+Y+P C+
Sbjct: 211 KYNPANNGAKLSGYSNIKRGSEADL-AAKLNIGPVAIALDASHSSFQLYKSGVFYDPACS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST L H VL VGYGT E  + YW+VKNSW T WGD GYI +A++R
Sbjct: 270 STSLSHGVLAVGYGT-EGSSAYWIVKNSWGTRWGDAGYIWIAKDR 313


>gi|344275470|ref|XP_003409535.1| PREDICTED: cathepsin S-like isoform 1 [Loxodonta africana]
          Length = 331

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 92/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A                                D  C
Sbjct: 185 MTRAFQYIIDNNGIDSEASYPYKAT-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ IDAS  SF  Y  GVYY+P C 
Sbjct: 214 QYDPKNRAATCSKYTELPYGSEDALKEAVANKGPVSVGIDASRPSFFLYKSGVYYDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +G++GYI+MARN
Sbjct: 273 TDNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGEQGYIRMARN 315


>gi|402856107|ref|XP_003892641.1| PREDICTED: cathepsin S isoform 2 [Papio anubis]
          Length = 281

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+++SYPY+A                                D  C
Sbjct: 135 MTRAFQYIIDNNGIDSDASYPYKAT-------------------------------DQKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK  VA  GPVS+ +DASH SF  Y  GVYYEP C 
Sbjct: 164 QYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYEPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG   NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 223 TQNVNHGVLVVGYGV-LNGKEYWLVKNSWGRNFGEEGYIRMARNK 266


>gi|54020916|ref|NP_001005702.1| cathepsin K (pycnodysostosis) precursor [Xenopus (Silurana)
           tropicalis]
 gi|49671274|gb|AAH75275.1| cathepsin K (pycnodysostosis) [Xenopus (Silurana) tropicalis]
          Length = 329

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y++DN GID+++ YPY                                  D+ C
Sbjct: 182 MTNAFGYVRDNGGIDSDAEYPY-------------------------------VGQDEGC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A  +GY +IP G E  LK AVA +GPVS++IDAS  SFQFY +GVYY+  CN
Sbjct: 211 HYNPADKAATCKGYKEIPVGSEKALKRAVANVGPVSVSIDASLPSFQFYKKGVYYDSSCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVLVVGYG +E G  +W++KNSW   WG +GY+ +AR++
Sbjct: 271 PDAVNHAVLVVGYG-NEKGIKHWIIKNSWGDWWGKKGYVLLARDK 314


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 93/168 (55%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDN- 59
           MD AFQY++DN GID+E SYPY                                 GD+N 
Sbjct: 219 MDLAFQYVRDNEGIDSEISYPY-----------------------------ISGDGDENV 249

Query: 60  -CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            C +      A   GY++I EGDE  L  AVATIGPVS+AI+A   SF  Y  G+Y +PE
Sbjct: 250 RCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPE 309

Query: 119 CNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C S    LDH VL+VGYG  E+G  YWL+KNSW   WGD+GY+K+ ++
Sbjct: 310 CASASEDLDHGVLLVGYGI-EDGKPYWLIKNSWGEDWGDKGYVKILKD 356


>gi|410904753|ref|XP_003965856.1| PREDICTED: cathepsin S-like [Takifugu rubripes]
          Length = 334

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+E+SYPY   +                                 C
Sbjct: 188 MHRAFQYVIDNQGIDSEASYPYRGQV-------------------------------QQC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A    Y  + +GDE  L+AAVA+IGP+S+AIDA    F FY  GVY +P C+
Sbjct: 217 HYNPAFRAANCSQYRFLTQGDEGNLQAAVASIGPISVAIDAKQPKFYFYKSGVYDDPSCS 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T ++HAVL VGYGT  NG DYWLVKNSW   +GD+GYI+M RN+
Sbjct: 277 QT-INHAVLAVGYGT-LNGQDYWLVKNSWGVKFGDKGYIRMVRNK 319


>gi|344275472|ref|XP_003409536.1| PREDICTED: cathepsin S-like isoform 2 [Loxodonta africana]
          Length = 281

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 92/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+A                                D  C
Sbjct: 135 MTRAFQYIIDNNGIDSEASYPYKAT-------------------------------DGKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK AVA  GPVS+ IDAS  SF  Y  GVYY+P C 
Sbjct: 164 QYDPKNRAATCSKYTELPYGSEDALKEAVANKGPVSVGIDASRPSFFLYKSGVYYDPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +  ++H VLVVGYG + NG DYWLVKNSW   +G++GYI+MARN
Sbjct: 223 TDNVNHGVLVVGYG-NLNGKDYWLVKNSWGLNFGEQGYIRMARN 265


>gi|28932708|gb|AAO60048.1| midgut cysteine proteinase 5 [Rhipicephalus appendiculatus]
          Length = 329

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 90/165 (54%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YIK N GIDTE  YPYEA+                               D  C
Sbjct: 184 MDNAFNYIKANDGIDTEEGYPYEAV-------------------------------DGEC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K+   GA D G+VDIP G E  LK A     P  +    S  SFQ YSEGVY E +C+
Sbjct: 213 RFKKEDVGATDTGFVDIPGGIEDDLKKASFCWPPPWLWRSPS--SFQLYSEGVYDESDCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S QLDH VLVVGYG  + G  YWLVKNSW  +WGD+GYI M+R++
Sbjct: 271 SEQLDHGVLVVGYGV-KGGKKYWLVKNSWAESWGDQGYILMSRDK 314


>gi|115740|sp|P25773.1|CATL1_FELCA RecName: Full=Cathepsin L1; AltName: Full=Progesterone-dependent
           protein; Short=PDP
 gi|552346|gb|AAA30816.1| progesterone-dependent protein, partial [Felis catus]
          Length = 139

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +D AFQY+KDN G+D+E SYPY A                                 D+C
Sbjct: 4   IDDAFQYVKDNGGLDSEESYPYHAQ-------------------------------GDSC 32

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A    Y DIP   E +L   +A +GP+S AIDAS  +F+FY EG+YY+P C+
Sbjct: 33  KYRPENSVANVTDYWDIPS-KENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCS 91

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  +DH VLVVGY   GT+     YW++KNSW T WG +GYIKMA++R
Sbjct: 92  SEDVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 93/168 (55%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDN- 59
           MD AFQY++DN GID+E SYPY                                 GD+N 
Sbjct: 219 MDLAFQYVRDNKGIDSEISYPY-----------------------------ISGDGDENV 249

Query: 60  -CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            C +      A   GY++I EGDE  L  AVATIGPVS+AI+A   SF  Y  G+Y +PE
Sbjct: 250 RCLFNSTNIMAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPE 309

Query: 119 CNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C S    LDH VL+VGYG  E+G  YWL+KNSW   WGD+GY+K+ ++
Sbjct: 310 CASASEDLDHGVLLVGYGI-EDGKPYWLIKNSWGEDWGDKGYVKILKD 356


>gi|3641698|dbj|BAA33398.1| preprocathepsin L [Bos taurus]
          Length = 301

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 88/150 (58%), Gaps = 34/150 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN G+D+E SYPY                              + +  ++C
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPY------------------------------LATDTNSC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK   S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H SFQFY  G+YY+P+C+
Sbjct: 213 NYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKN 147
           S  LDH VLVVGY   GTD N N +W+VKN
Sbjct: 272 SKDLDHGVLVVGYGFEGTDSNNNKFWIVKN 301


>gi|395535909|ref|XP_003769963.1| PREDICTED: cathepsin S [Sarcophilus harrisii]
          Length = 347

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+++SYPY+A                                D  C
Sbjct: 201 MTEAFQYIIDNNGIDSDASYPYKAK-------------------------------DGKC 229

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A   A    Y ++P G E  LK AVA  GPVS+ IDAS  SF  Y  GVYY+P C 
Sbjct: 230 QYNPANRAATCSRYTELPYGSEDALKEAVANKGPVSVGIDASLPSFFLYKSGVYYDPSC- 288

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLV GYG + +G DYWLVKNSW  ++GD+GYI++ARNR
Sbjct: 289 TQNVNHGVLVTGYG-NLDGKDYWLVKNSWGLSFGDKGYIRIARNR 332


>gi|894096|gb|AAC42066.1| cathepsin-related protein, partial [Rattus norvegicus]
          Length = 236

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QAF Y+  N G++ E++YPYE                                 D  CRY
Sbjct: 87  QAFNYVLKNKGLEAEATYPYEGK-------------------------------DGPCRY 115

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               + A   G+V++P  + Y L  AVA+IGPVS AIDASH SF+FYS GVY+EP C+S 
Sbjct: 116 HSENASANITGFVNLPPNELY-LWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSY 174

Query: 123 QLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
            ++HAVLVVGYG + N   GN+YWL+KNSW   WG  G++K+A++R
Sbjct: 175 VVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDR 220


>gi|66810271|ref|XP_638859.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
 gi|166201983|sp|Q23894.2|CYSP3_DICDI RecName: Full=Cysteine proteinase 3; AltName: Full=Cysteine
           proteinase II; Flags: Precursor
 gi|60467526|gb|EAL65548.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI  N+G+++E  YPYE  +                              +D C
Sbjct: 190 MTNAFEYIIKNNGLNSEEQYPYEMKV------------------------------NDEC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +++     A    Y +I  GDE  L+ A+  + PVS+AIDASH SFQ Y+ GVYYEP C+
Sbjct: 220 KFQEGSVAAKITSYKEIEAGDENDLQNAL-LLNPVSVAIDASHNSFQLYTAGVYYEPACS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VG GTD NG DY++VKNSW  +WG  GYI MARN+
Sbjct: 279 SEDLDHGVLAVGMGTD-NGEDYYIVKNSWGPSWGLNGYIHMARNK 322


>gi|39930363|ref|NP_058817.1| cathepsin J precursor [Rattus norvegicus]
 gi|84028185|sp|Q63088.2|CATJ_RAT RecName: Full=Cathepsin J; AltName: Full=Cathepsin L-related
           protein; AltName: Full=Cathepsin P; AltName:
           Full=Catlrp-p; Flags: Precursor
 gi|28196048|gb|AAL26793.2| cathepsin P [Rattus norvegicus]
 gi|66910531|gb|AAH97263.1| Cathepsin J [Rattus norvegicus]
 gi|149039736|gb|EDL93852.1| cathepsin J [Rattus norvegicus]
          Length = 334

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QAF Y+  N G++ E++YPYE                                 D  CRY
Sbjct: 185 QAFNYVLKNKGLEAEATYPYEGK-------------------------------DGPCRY 213

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               + A   G+V++P  + Y L  AVA+IGPVS AIDASH SF+FYS GVY+EP C+S 
Sbjct: 214 HSENASANITGFVNLPPNELY-LWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSSY 272

Query: 123 QLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
            ++HAVLVVGYG + N   GN+YWL+KNSW   WG  G++K+A++R
Sbjct: 273 VVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDR 318


>gi|440799058|gb|ELR20119.1| cysteine proteinase [Acanthamoeba castellanii str. Neff]
          Length = 401

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 93/166 (56%), Gaps = 34/166 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI DN GID+E+SYPY A                                D  C
Sbjct: 254 MDNAFRYIIDNKGIDSEASYPYVA-------------------------------ADGQC 282

Query: 61  RY-KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           R+  +   G        +P+GDE  L  A A   P+S+ IDA   SFQFYS+GVY EPEC
Sbjct: 283 RFNPKTVYGGKGGTLKSLPKGDEKALLVAAAR-QPISVGIDAGRPSFQFYSKGVYNEPEC 341

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +ST+L+H VL+VG+G  E G  YWLVKNSW  TWG +GYIKM+R++
Sbjct: 342 SSTELNHGVLIVGWGV-ERGQAYWLVKNSWGQTWGMDGYIKMSRDK 386


>gi|291383488|ref|XP_002708302.1| PREDICTED: cathepsin L1 [Oryctolagus cuniculus]
          Length = 344

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 96/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPYE                                   +C
Sbjct: 183 MDYAFQYVKDNRGLDSEESYPYEQR-------------------------------KGSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A   G+VD+ + DE  L  AVAT+GPVS+ I  + +SF FY  G+YY+P+C+
Sbjct: 212 KYNPRFSAANVTGFVDVSK-DEKALMEAVATVGPVSVGIATTPESFLFYEGGIYYDPKCS 270

Query: 121 STQLDHAVLVVGYGTDENG---NDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVLVVGYG +E G   N YWL+KNSW   WG  GY+KMA+++
Sbjct: 271 SENVNHAVLVVGYGFEEVGSKNNKYWLIKNSWGKDWGMGGYMKMAKDQ 318


>gi|72005575|ref|XP_783218.1| PREDICTED: cathepsin L2-like isoform 2 [Strongylocentrotus
           purpuratus]
 gi|390337647|ref|XP_003724610.1| PREDICTED: cathepsin L2-like isoform 1 [Strongylocentrotus
           purpuratus]
          Length = 334

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 91/162 (56%), Gaps = 31/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +YIK N GIDTE  YPYE +                               DD+C Y+
Sbjct: 189 ADEYIKSNGGIDTEVGYPYEGV-------------------------------DDSCHYR 217

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
            +  GA   G+ ++    E  L+ A+A +GP+S+ IDA+  SFQ Y  GVY EP+C+ST 
Sbjct: 218 TSDVGATITGFAEVEADSEKALEKALAQVGPISVCIDATQPSFQLYESGVYDEPDCSSTA 277

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           LDH V  VGY +  +G+ Y++VKNSW TTWG EGYI M+R++
Sbjct: 278 LDHCVTAVGYDSTADGDKYYIVKNSWGTTWGQEGYIWMSRDK 319


>gi|94448670|emb|CAI91573.1| silicatein a4 [Lubomirskia baicalensis]
 gi|312386085|gb|ADQ74587.1| silicatein alpha 4 [Lubomirskia baicalensis]
          Length = 326

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 92/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 182 AMKYVIDNGGIDTESSYSFQGKQS-------------------------------SCQYS 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G + I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C++T+
Sbjct: 211 SKNSGASATGVISIASGSETDLFAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSNTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDNGYIMMVRNK 311


>gi|351712164|gb|EHB15083.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 96/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K+N G+++E  YPYE                                 D +C
Sbjct: 128 MDFAFEYVKENKGLESEKFYPYEGK-------------------------------DGSC 156

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDI +  E  L  AVA  GP+S+A+DA   SFQFY +G+Y++PEC+
Sbjct: 157 KYKPELSAANDTGFVDISQ-REKALMKAVAEEGPISVAVDAGLTSFQFYKDGIYFDPECS 215

Query: 121 STQLDHAVLVVGYGTDE---NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLV+GYG +E     N+YWLVKNS    WG +GY+K+A NR
Sbjct: 216 SKDLNHGVLVLGYGYEEVNSEKNEYWLVKNSSGPEWGAKGYMKIAGNR 263


>gi|297663703|ref|XP_002810310.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin S [Pongo abelii]
          Length = 330

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 90/165 (54%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQYI DN GID+++SYPY+AM+                                 C
Sbjct: 185 MTTAFQYIIDNKGIDSDASYPYKAMV--------------------------------KC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y D   G E  LK AVA  GPVS+ +DA H SF  Y  GVYYEP C 
Sbjct: 213 QYDSKYRAATCSKYTDFXYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VLVVGYG D NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 272 TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGRNFGEEGYIRMARNK 315


>gi|346574375|gb|AEO36959.1| silicatein-alpha 2 [Baikalospongia fungiformis]
          Length = 316

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/162 (44%), Positives = 90/162 (55%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY      S                               +C+Y 
Sbjct: 172 AIKYVVDNGGIDTESSYSLRGKQS-------------------------------SCQYN 200

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V IP G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 201 SNNSGASATGAVGIPYGSESDLMAAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTK 260

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 261 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDNGYIMMVRNK 301


>gi|42744610|gb|AAH66625.1| Ctssa protein [Danio rerio]
          Length = 321

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +AF Y+  N GID+ + YPYE                     HK          +  C
Sbjct: 175 LSRAFLYVIQNRGIDSSTFYPYE---------------------HK----------EGVC 203

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +       G+  +P  +E  L++AVA IGPVS+ I+A   SF  Y  G+Y +P+C+
Sbjct: 204 RYSVSGRAGYCTGFRIVPRHNEAALQSAVANIGPVSVGINAKLLSFHRYRSGIYNDPKCS 263

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVLVVGYG+ ENG DYWLVKNSW T WG+ GYI+MARN+
Sbjct: 264 SALINHAVLVVGYGS-ENGQDYWLVKNSWGTAWGENGYIRMARNK 307


>gi|41055337|ref|NP_956720.1| cathepsin S, a [Danio rerio]
 gi|32451845|gb|AAH54668.1| Cathepsin S, a [Danio rerio]
          Length = 239

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +AF Y+  N GID+ + YPYE                     HK          +  C
Sbjct: 93  LSRAFLYVIQNRGIDSSTFYPYE---------------------HK----------EGVC 121

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +       G+  +P  +E  L++AVA IGPVS+ I+A   SF  Y  G+Y +P+C+
Sbjct: 122 RYSVSGRAGYCTGFRIVPRHNEAALQSAVANIGPVSVGINAKLLSFHRYRSGIYNDPKCS 181

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVLVVGYG+ ENG DYWLVKNSW T WG+ GYI+MARN+
Sbjct: 182 SALINHAVLVVGYGS-ENGQDYWLVKNSWGTAWGENGYIRMARNK 225


>gi|405958752|gb|EKC24846.1| Cathepsin L1 [Crassostrea gigas]
          Length = 290

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI D  GI++ +SYPY+                                 ++ C
Sbjct: 143 MDAAFKYIHDVGGIESNASYPYKP-------------------------------AEEKC 171

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ ++   A  +GY D+P+ +E  L  AVAT+GP+S A+DASH SFQ Y  GVY EP C+
Sbjct: 172 KFNKSAVVAKVKGYKDLPKSEE-SLMVAVATVGPISAALDASHSSFQLYKSGVYDEPNCS 230

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S Q+DH+++VVGYG   +G  YW+ KNSW T+WGD+GYI +++++
Sbjct: 231 SGQVDHSLVVVGYGL-MDGKKYWIAKNSWGTSWGDKGYILLSKDK 274


>gi|188501707|gb|ACD54818.1| cathepsin L precursor-like protein [Adineta vaga]
          Length = 331

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 94/164 (57%), Gaps = 32/164 (19%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D A+ YIK +HGI +E SYPY A                                 D C+
Sbjct: 185 DLAYDYIKMHHGISSEESYPYWAER-------------------------------DICQ 213

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           + +    A   G+  I + +E  L+AA+ATIGP++++IDA   SFQFYS GVY EP C++
Sbjct: 214 FNKIHIAATITGHARIKKHNETDLQAAIATIGPIAVSIDAGQGSFQFYSSGVYDEPNCST 273

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +LDHAVL VGYGT  N  DY++VKNSW ++WG  GYI M+RN+
Sbjct: 274 KRLDHAVLAVGYGT-LNSKDYYIVKNSWGSSWGIRGYILMSRNK 316


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 98/165 (59%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI DN GI +ES+YPY                               T+ + +C
Sbjct: 183 MDSAFDYIHDN-GIMSESAYPY-------------------------------TASEGSC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S    +GY D+P GDE  LK+AVA  GP+++A+DA+ +  QFYS GV Y+  C+
Sbjct: 211 RFNPSESVTSLQGYYDLPSGDENALKSAVANNGPIAVALDATDE-LQFYSGGVLYDTTCS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  L+H VLVVGYG+ E G DYW+VKNSW + WG++GY + ARNR
Sbjct: 270 AQALNHGVLVVGYGS-EGGQDYWIVKNSWGSGWGEQGYWRQARNR 313


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 90/165 (54%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI++N GIDTE SYPY+A                                +  C
Sbjct: 181 MTTAFKYIEENKGIDTEESYPYKAK-------------------------------NGRC 209

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K+   GA    +V I   D   LK AVA IGP+S+A+DASH SFQ Y  G+Y    C+
Sbjct: 210 EFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASHSSFQLYKSGIYDPKICS 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +LDH VLVVGYG  E+G +YWLVKNSW   WG EGY K+A  +
Sbjct: 270 SRKLDHGVLVVGYG-KEDGEEYWLVKNSWGKNWGMEGYFKIASKK 313



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 3/67 (4%)

Query: 168 YEPE-CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVAS 226
           Y+P+ C+S +LDH VLVVGYG  E+G +YWLVKNSW   WG EGY K+A +++N CG+ +
Sbjct: 263 YDPKICSSRKLDHGVLVVGYG-KEDGEEYWLVKNSWGKNWGMEGYFKIA-SKKNLCGICT 320

Query: 227 SASFPLV 233
           SA +P+V
Sbjct: 321 SACYPVV 327


>gi|281211531|gb|EFA85693.1| cysteine protease [Polysphondylium pallidum PN500]
          Length = 366

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 97/199 (48%), Gaps = 64/199 (32%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF YI  NHGIDTE SYPY A                        N  +V      C
Sbjct: 183 MNNAFDYIISNHGIDTEQSYPYTA------------------------NTGSV------C 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ +   GA    Y  I  G E  L  AV T GPVS+AIDASH+SFQ YS G+YYE  C+
Sbjct: 213 KFNKTNVGATISSYKSITPGSETDLANAVKTAGPVSVAIDASHRSFQLYSHGIYYEWLCS 272

Query: 121 STQLDHAVLVVGYGTDENGN----------------------------------DYWLVK 146
           ST+LDH VLVVGYG+    N                                  +YW+VK
Sbjct: 273 STRLDHGVLVVGYGSGNPPNSDMDHMILKKTAKTDHYHGKKSLKVEKVDTTSSKNYWIVK 332

Query: 147 NSWNTTWGDEGYIKMARNR 165
           NSW+ TWGD+GYI M+++R
Sbjct: 333 NSWSDTWGDKGYIYMSKDR 351


>gi|391333246|ref|XP_003741030.1| PREDICTED: digestive cysteine proteinase 2-like [Metaseiulus
           occidentalis]
          Length = 327

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 97/163 (59%), Gaps = 33/163 (20%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           ++F+YI+ N GI TESSY YEA                             T+G  +CR+
Sbjct: 183 ESFEYIRSNGGIATESSYGYEA-----------------------------TAG--SCRF 211

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
                GA   G   +  GDE  L  AVA+IGP+S+ ID    +F+ YS GVYY+ EC+S+
Sbjct: 212 TADSIGATVSGRDSVASGDEEALLKAVASIGPISVTIDV-IDTFRHYSSGVYYDAECSSS 270

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +HAVLVVGYGT E G DYWLVKNSW T++G++GYIKMARN+
Sbjct: 271 SRNHAVLVVGYGT-EAGGDYWLVKNSWGTSFGEQGYIKMARNK 312


>gi|170587872|ref|XP_001898698.1| fibroinase precursor [Brugia malayi]
 gi|158593968|gb|EDP32562.1| fibroinase precursor, putative [Brugia malayi]
          Length = 180

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 93/166 (56%), Gaps = 36/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +AF YIK+N GID+ESSYPYEA                                +  CRY
Sbjct: 23  KAFDYIKENGGIDSESSYPYEAK-------------------------------EGPCRY 51

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
                 + D G VD+PEGDE +L+ AVA IG +S+AI+A + S   Y EG++    C+S 
Sbjct: 52  SNRTRLSTDSGKVDLPEGDEMQLQEAVANIGXISVAINARYLS--LYDEGIFTRANCSSE 109

Query: 123 QLDHAVLVVGYGTDE---NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +LDH VLVVGYGT+E      DYW+VKNSW   WG+ GY ++ RN+
Sbjct: 110 ELDHGVLVVGYGTEEVRGKNLDYWIVKNSWGKDWGENGYFRLTRNK 155


>gi|62955291|ref|NP_001017661.1| cathepsin S, b.2 precursor [Danio rerio]
 gi|62204682|gb|AAH93339.1| Cathepsin S, b.2 [Danio rerio]
 gi|182891354|gb|AAI64362.1| Ctssb.2 protein [Danio rerio]
          Length = 330

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID+ESSYPY+                              T G  +C
Sbjct: 184 MSQAFQYVIDNGGIDSESSYPYQG-----------------------------TQG--SC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  ++  A    Y  + +GDE  LK A+A IGPVS+AIDA+   F FY  GVY +P C 
Sbjct: 213 RYDPSQRAANCTSYKFVSQGDEQALKEALANIGPVSVAIDATRPQFIFYRSGVYDDPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VL VGYGT  +G DYWLVKNSW   +GD GYI++ARN+
Sbjct: 272 TQKVNHGVLAVGYGT-LSGQDYWLVKNSWGAGFGDGGYIRIARNK 315


>gi|387915678|gb|AFK11448.1| cathepsin L1 [Callorhinchus milii]
          Length = 336

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AF YI+ N+GIDTE+SYPY                               T+ +  C
Sbjct: 189 MDRAFTYIQQNNGIDTEASYPY-------------------------------TAKEHPC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    + A   GY    + DE  L   VATIGP+S+AIDA H SFQFY  G+Y EP C 
Sbjct: 218 NYDPRHNAATCHGYRYSEQYDEMALAETVATIGPISVAIDAKHISFQFYKSGIYQEPRCQ 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++HAVLVVGY + + GN+YW+VKNS+ + WG++GYI M +++
Sbjct: 278 SYNINHAVLVVGYNS-QGGNNYWIVKNSFGSRWGNKGYIWMPKDK 321


>gi|313241067|emb|CBY33367.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F YI +N GI TES+YPY+A                                D +C
Sbjct: 180 MDFGFTYIIENDGITTESAYPYKAQ-------------------------------DGSC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +     +  +   Y D+ +G E  L+ AVAT+GP+S+AIDA   SF+ Y +G+Y++  C+
Sbjct: 209 KSGMTAAATLSECY-DVAQGSEADLETAVATVGPISVAIDAHLLSFRLYKQGIYHDRLCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VL VGY  D +GN YW+VKNSWNTTWG+EGYI MA+++
Sbjct: 268 STRLDHGVLAVGYKNDPSGN-YWIVKNSWNTTWGNEGYIWMAKDK 311


>gi|67678376|gb|AAH96862.1| Cathepsin S, b.2 [Danio rerio]
          Length = 330

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 95/165 (57%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID+ESSYPY+                              T G  +C
Sbjct: 184 MSQAFQYVIDNGGIDSESSYPYQG-----------------------------TQG--SC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  ++  A    Y  + +GDE  LK A+A IGPVS+AIDA+   F FY  GVY +P C 
Sbjct: 213 RYDPSQRAANCTSYKFVSQGDEQALKEALANIGPVSVAIDATRPQFIFYRSGVYDDPSC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VL VGYGT  +G DYWLVKNSW   +GD GYI++ARN+
Sbjct: 272 TQKVNHGVLAVGYGT-LSGQDYWLVKNSWGAGFGDGGYIRIARNK 315


>gi|410990014|ref|XP_004001245.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 334

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 94/168 (55%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+K+N G+DTE SYPY A                                D  C
Sbjct: 184 MSNAFQYVKNNGGLDTEESYPYVAR-------------------------------DGPC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A    + +IP+ +E  L  AVA +GP+S AIDAS  +F+FY EG+YY+P+C+
Sbjct: 213 KYRPEHSAANVTAFENIPQQEE-ALMMAVANMGPISAAIDASLDTFRFYKEGIYYDPKCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGY   G + +   YW VKNSW   WG +GYIKMA++R
Sbjct: 272 SEDLNHGVLVVGYGFQGKESDNQKYWFVKNSWGADWGMDGYIKMAKDR 319


>gi|313235898|emb|CBY11285.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD  F YI +N GI TES+YPY+A                                D +C
Sbjct: 180 MDFGFTYIIENDGITTESAYPYKAQ-------------------------------DGSC 208

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +     +  +   Y D+ +G E  L+ AVAT+GP+S+AIDA   SF+ Y +G+Y++  C+
Sbjct: 209 KSGMTAAATLSECY-DVAQGSEADLETAVATVGPISVAIDAHLLSFRLYKQGIYHDRLCS 267

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ST+LDH VL VGY  D +GN YW+VKNSWNTTWG+EGYI MA+++
Sbjct: 268 STRLDHGVLAVGYKNDPSGN-YWIVKNSWNTTWGNEGYIWMAKDK 311


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 92/168 (54%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDN- 59
           MD AFQY++DN GID+E SYPY                                 GD+N 
Sbjct: 219 MDLAFQYVRDNEGIDSEISYPY-----------------------------ISGDGDENV 249

Query: 60  -CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            C +      A   GY++I EGDE  L  AV TIGPVS+AI+A   SF  Y  G+Y +PE
Sbjct: 250 RCLFNFTNIMAQVTGYINIHEGDERALMNAVTTIGPVSVAINAGLSSFSMYKSGIYSDPE 309

Query: 119 CNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C S    LDH VL+VGYG  E+G  YWL+KNSW   WGD+GY+K+ ++
Sbjct: 310 CASASEDLDHGVLLVGYGI-EDGKPYWLIKNSWGEDWGDKGYVKILKD 356


>gi|296168735|emb|CAQ54045.1| silicatein alpha 4 [Ephydatia sp. n. 1 PW-2008]
 gi|296168745|emb|CAQ54050.1| silicatein alpha 4 [Ephydatia sp. n. 2 PW-2008]
          Length = 189

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 93/162 (57%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY          SF  ++L                     +C+Y 
Sbjct: 55  AMKYVIDNGGIDTESSY----------SFQGKQL---------------------SCQYS 83

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G + I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 84  SKNSGASATGVISITSGSETDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSSTK 143

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 144 PNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDNGYILMVRNK 184


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 96/166 (57%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDN- 59
           MD AF+Y+KD++GIDTE+SYPY                            V+  +GD N 
Sbjct: 233 MDNAFKYVKDSNGIDTEASYPY----------------------------VSGETGDANP 264

Query: 60  -CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            CR+   ++     GY+D+P G   +LK AV   GP+S+AI+A   SF  Y  GVY + +
Sbjct: 265 TCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQ 324

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C+S  LDH VL+VGYG +ENG  YWL+KNSW   WG+ GY+K+ R+
Sbjct: 325 CSSDDLDHGVLLVGYG-EENGIPYWLIKNSWGPHWGENGYVKILRD 369


>gi|359385052|emb|CBY80151.1| silicatein, partial [Discodermia japonica]
          Length = 139

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y+  N G+DT S+YPY+   S                               +C
Sbjct: 1   MYDAFLYVVANDGVDTSSAYPYQGQQS-------------------------------SC 29

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK++  GA   G V I  G+E  L++AVA +GP+++A+DAS  +F++YS+GVY    C+
Sbjct: 30  SYKKSGFGATVSGTVTIASGNEDDLQSAVANVGPIAVAVDASSNAFRYYSKGVYSSSRCS 89

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           STQL HA++V GYG+  NG DY+LVKNSW T WG  GYI M RN+
Sbjct: 90  STQLTHAMVVTGYGS-YNGVDYFLVKNSWGTNWGMNGYILMTRNK 133


>gi|327322928|gb|AEA48885.1| cathepsin S [Oplegnathus fasciatus]
          Length = 337

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+++SYPY                               T     C
Sbjct: 191 MHRAFQYVIDNQGIDSDASYPY-------------------------------TGQSQQC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  A   A    Y  +PEGDE  LK A+ATIGP+S+AIDA+  SF FY  GV Y+ +  
Sbjct: 220 HYNPAYRAANCSRYSSLPEGDEGALKEALATIGPISVAIDATRPSFTFYRSGV-YDDQTY 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++H VL VGYGT  NG DYWLVKN W +T+GD+G+I+MARN+
Sbjct: 279 TRNVNHGVLAVGYGT-LNGKDYWLVKNGWGSTFGDKGFIRMARNK 322



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)

Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASS 227
           Y+ +  +  ++H VL VGYGT  NG DYWLVKN W +T+GD+G+I+MARN+ + CG+A  
Sbjct: 273 YDDQTYTRNVNHGVLAVGYGT-LNGKDYWLVKNGWGSTFGDKGFIRMARNKNDQCGIALY 331

Query: 228 ASFPLV 233
             +P++
Sbjct: 332 GCYPIM 337


>gi|196476710|gb|ACG76220.1| cathepsin L-like cysteine proteinase [Amblyomma americanum]
          Length = 92

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/78 (79%), Positives = 68/78 (87%), Gaps = 1/78 (1%)

Query: 88  AVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKN 147
           AVAT+GPVS+AIDASHQSFQFYSEGVY EPEC+S  LDH VLVVGYGT ++  DYWLVKN
Sbjct: 1   AVATVGPVSVAIDASHQSFQFYSEGVYDEPECSSENLDHGVLVVGYGTKDD-QDYWLVKN 59

Query: 148 SWNTTWGDEGYIKMARNR 165
           SW TTWGDEGYI M RN+
Sbjct: 60  SWGTTWGDEGYIYMTRNK 77


>gi|296168737|emb|CAQ54046.1| silicatein alpha 2 [Ephydatia muelleri]
          Length = 340

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 90/162 (55%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY +    S                               +C+Y 
Sbjct: 196 AIKYVVDNGGIDTESSYSFRGKQS-------------------------------SCQYN 224

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L +AVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 225 SKNSGASATGAVSISYGSESDLMSAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTK 284

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 285 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDSGYIMMVRNK 325


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 96/166 (57%), Gaps = 31/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDN- 59
           MD AF+Y+KD++GIDTE+SYPY                            V+  +GD N 
Sbjct: 221 MDNAFKYVKDSNGIDTEASYPY----------------------------VSGETGDANP 252

Query: 60  -CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            CR+   ++     GY+D+P G   +LK AV   GP+S+AI+A   SF  Y  GVY + +
Sbjct: 253 TCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQ 312

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C+S  LDH VL+VGYG +ENG  YWL+KNSW   WG+ GY+K+ R+
Sbjct: 313 CSSDDLDHGVLLVGYG-EENGIPYWLIKNSWGPHWGENGYVKILRD 357


>gi|288764225|emb|CAQ03433.1| silcatein 2 [Spongilla lacustris]
 gi|296168749|emb|CAQ54052.1| silicatein alpha 4 [Spongilla lacustris]
          Length = 326

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESS  ++A  S                               +C+Y 
Sbjct: 182 ALKYVIDNGGIDTESSCSFQAKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G ++I  G E  L AAVAT+GPV+IA+DA+  +F+FY  GV+    C++T+
Sbjct: 211 SKNSGASATGVINIAFGSESDLLAAVATVGPVAIAVDANTNAFRFYQSGVFDSSSCSNTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWGKNWGDSGYILMVRNK 311


>gi|83715950|dbj|BAE54434.1| silicatein [Ephydatia fluviatilis]
          Length = 326

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 90/162 (55%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY +    S                               +C+Y 
Sbjct: 182 AIKYVVDNGGIDTESSYSFRGKQS-------------------------------SCQYN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L +AVAT+GPV++A+DA+  +F+FY  GV+    C+ST+
Sbjct: 211 SKNSGASATGAVSISYGSESDLMSAVATVGPVAVAVDANTNAFRFYQSGVFDSSTCSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 271 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDSGYIMMVRNK 311


>gi|288764227|emb|CAQ03434.1| silcatein 4 [Spongilla lacustris]
          Length = 331

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/162 (43%), Positives = 91/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY ++A  S                               +C+Y 
Sbjct: 187 ALKYVIDNGGIDTESSYSFQAKQS-------------------------------SCQYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L AAVAT+GPV+IA+DA+  +F+FY  GV+    C++T 
Sbjct: 216 STNSGASATGVVRIASGSESDLLAAVATVGPVAIAVDANTNAFRFYKSGVFDSSSCSNTV 275

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNS+   WGD GYI M RN+
Sbjct: 276 LNHAMLVTGYGS-YNGKDYWLVKNSFGKNWGDSGYILMVRNK 316


>gi|351705687|gb|EHB08606.1| Cathepsin S [Heterocephalus glaber]
          Length = 331

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN+GID+E+SYPY+A                                D+ C
Sbjct: 185 MTEAFQYVIDNNGIDSETSYPYKAT-------------------------------DEKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A    Y ++P G E  LK AVA  GPVS+A+DAS  SF  Y  GVY +P C 
Sbjct: 214 HYDSKNRAATCSRYTELPYGSEEALKEAVANKGPVSVAVDASRPSFFLYKNGVYDDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  + H VL VGYG + NG DYWLVKNSW   +GD+GYI+MARN+
Sbjct: 273 TQNVTHGVLAVGYG-NLNGKDYWLVKNSWGLYFGDQGYIRMARNK 316


>gi|340374922|ref|XP_003385986.1| PREDICTED: cathepsin L-like [Amphimedon queenslandica]
          Length = 325

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 96/165 (58%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+AF Y+++   I +E SYPY   M                                 C
Sbjct: 178 MDRAFAYVRNKGYICSEESYPYVGYMW-------------------------------AC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +       A  RGY +I  GDE  L  AV+++G VS+AIDAS  SFQFYS GV+Y+ +C+
Sbjct: 207 KSSSCSPAASCRGYKNIASGDEESLTNAVSSVGTVSVAIDASRYSFQFYSSGVFYDSDCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++L+H VLVVGYGT  +G +Y++VKNSW++ WGD+GY+ MARN+
Sbjct: 267 SSRLNHGVLVVGYGTYYDGTEYYIVKNSWSSDWGDKGYVLMARNK 311


>gi|355560374|gb|EHH17060.1| hypothetical protein EGK_13355 [Macaca mulatta]
          Length = 234

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 35/164 (21%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
           F+ + +  G+D+E+SYPYE  +                                 CRY  
Sbjct: 88  FRQVMNGGGLDSEASYPYEGKVK-------------------------------TCRYNP 116

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
             S A D G+VDIP   E  L  AVAT+GP+S+A+DASH SFQFY +G+Y+EP C+   L
Sbjct: 117 KYSVANDTGFVDIPS-REKDLAKAVATVGPISVAVDASHFSFQFYKKGIYFEPRCDPEGL 175

Query: 125 DHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           DHA+L VGY   G D + N YWLVKN     WG +GYIKMA++R
Sbjct: 176 DHAMLAVGYGYEGADSDNNKYWLVKNRTGKNWGMDGYIKMAKDR 219


>gi|209967793|gb|ACJ02498.1| cathepsin-L [Acanthodendrilla sp. Vietnam]
          Length = 224

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/144 (50%), Positives = 85/144 (59%), Gaps = 32/144 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF+YIK+N GIDTE+SYPY+A                                D+ C
Sbjct: 113 MDQAFEYIKNNGGIDTEASYPYQAE-------------------------------DEPC 141

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+K +  GA   GYVDI   DE  L+ A A +GP+S+AIDASH SFQFY  GVY EP+C+
Sbjct: 142 RFKASNVGATCTGYVDITHDDEDALQKASADVGPISVAIDASHVSFQFYHSGVYNEPDCS 201

Query: 121 STQLDHAVLVVGYGTDENGNDYWL 144
            T LDH VLVVGYGT E G  YWL
Sbjct: 202 QTALDHGVLVVGYGTYE-GQAYWL 224


>gi|62945374|ref|NP_001017509.1| uncharacterized protein LOC498688 precursor [Rattus norvegicus]
 gi|60552853|gb|AAH91563.1| Similar to cathepsin R [Rattus norvegicus]
 gi|149039732|gb|EDL93848.1| similar to cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQY+  N G+ +E++YPYE                                 D  CRY 
Sbjct: 187 AFQYVLHNGGLQSEATYPYEGK-------------------------------DGPCRYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +PE ++  L  AVATIGP+S  IDASH+SF+FY +G+Y+EP C+S  
Sbjct: 216 PKNSSAEITGFVSLPESEDI-LMVAVATIGPISAGIDASHESFKFYKKGIYHEPNCSSNS 274

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H VLVVGY   G D  G+ YWL+KNSW   WG  GY+K+ +++
Sbjct: 275 VTHGVLVVGYGFKGNDTGGDHYWLIKNSWGKQWGIRGYMKITKDK 319


>gi|7770062|ref|NP_036137.1| cathepsin J precursor [Mus musculus]
 gi|6467374|gb|AAF13142.1|AF136272_1 cathepsin J precursor [Mus musculus]
 gi|15418834|gb|AAK58455.1| cathepsin J [Mus musculus]
 gi|148709364|gb|EDL41310.1| cathepsin J, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QAF+Y+  N G++ E++YPYE                                 D  CRY
Sbjct: 184 QAFEYVLKNKGLEAEATYPYEGK-------------------------------DGPCRY 212

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
           +   + A    YV++P  + Y L  AVA+IGPVS AIDASH SF+FY+ G+YYEP C+S 
Sbjct: 213 RSENASANITDYVNLPPNELY-LWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSY 271

Query: 123 QLDHAVLVVGYGTD---ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            ++HAVLVVGYG++   ++GN+YWL+KNSW   WG  GY+++A++ 
Sbjct: 272 FVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDH 317


>gi|84028184|sp|Q9R014.2|CATJ_MOUSE RecName: Full=Cathepsin J; AltName: Full=Cathepsin L-related
           protein; AltName: Full=Cathepsin P; AltName:
           Full=Catlrp-p; Flags: Precursor
 gi|5306071|gb|AAD41898.1|AF158182_1 preprocathepsin P [Mus musculus]
 gi|12838143|dbj|BAB24099.1| unnamed protein product [Mus musculus]
 gi|74199838|dbj|BAE20748.1| unnamed protein product [Mus musculus]
 gi|74355544|gb|AAI03770.1| Cathepsin J [Mus musculus]
 gi|148709363|gb|EDL41309.1| cathepsin J, isoform CRA_a [Mus musculus]
          Length = 334

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QAF+Y+  N G++ E++YPYE                                 D  CRY
Sbjct: 185 QAFEYVLKNKGLEAEATYPYEGK-------------------------------DGPCRY 213

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
           +   + A    YV++P  + Y L  AVA+IGPVS AIDASH SF+FY+ G+YYEP C+S 
Sbjct: 214 RSENASANITDYVNLPPNELY-LWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSY 272

Query: 123 QLDHAVLVVGYGTD---ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            ++HAVLVVGYG++   ++GN+YWL+KNSW   WG  GY+++A++ 
Sbjct: 273 FVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDH 318


>gi|148235365|ref|NP_001083441.1| uncharacterized protein LOC398927 precursor [Xenopus laevis]
 gi|38014481|gb|AAH60424.1| MGC68723 protein [Xenopus laevis]
          Length = 333

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 90/162 (55%), Gaps = 33/162 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +F+YI DN GI+ ES YPY+                                 D  C Y 
Sbjct: 190 SFRYIIDN-GIELESIYPYQGK-------------------------------DGKCSYT 217

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             K       Y  +P G+E  LK  V  +GPVS+AI+ S ++F+ Y  GVYY+P C  + 
Sbjct: 218 PVKKAPRCTSYRQLPYGNEATLKQVVGLMGPVSVAIEGSRKTFRMYKSGVYYDPNCGGST 277

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +DH+VLVVGYG  E+G +YWLVKNSW T++GDEGYIKMARNR
Sbjct: 278 VDHSVLVVGYGA-EDGVEYWLVKNSWGTSFGDEGYIKMARNR 318


>gi|296168743|emb|CAQ54049.1| silicatein alpha 2 [Ephydatia sp. n. 2 PW-2008]
          Length = 189

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 89/162 (54%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY +    S                               +C+Y 
Sbjct: 55  AIKYVVDNGGIDTESSYSFRGKQS-------------------------------SCQYN 83

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G V I  G E  L +AVAT+GPV++A+DA+  +F+ Y  GV+    C+ST+
Sbjct: 84  SKNSGASATGAVSISYGSESDLMSAVATVGPVAVAVDANTNAFRLYQSGVFDSSTCSSTK 143

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+LV GYG+  NG DYWLVKNSW   WGD GYI M RN+
Sbjct: 144 LNHAMLVTGYGS-YNGKDYWLVKNSWGKYWGDSGYIMMVRNK 184


>gi|334324655|ref|XP_001370975.2| PREDICTED: cathepsin S-like isoform 1 [Monodelphis domestica]
          Length = 331

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN+GID++ SYPY+A                                D  C
Sbjct: 185 MTSAFQYVIDNNGIDSDVSYPYKAT-------------------------------DGKC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A   A    Y ++P G E  LK AVA  GPVS+ IDA   SF  Y  GVYY+P C 
Sbjct: 214 QYNPASRAATCSKYTELPYGSEEALKEAVANKGPVSVGIDAKTPSFFLYKSGVYYDPSC- 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VLV+GYG + +G DYWLVKNSW   +GD+GY+++ARNR
Sbjct: 273 TQKVNHGVLVIGYG-NLDGQDYWLVKNSWGLHFGDKGYVRIARNR 316


>gi|405977173|gb|EKC41636.1| Cathepsin K [Crassostrea gigas]
          Length = 942

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A++YI  N GIDTE SYPY                                  + NC ++
Sbjct: 798 AYKYIARNGGIDTEESYPY-------------------------------LGKNGNCTFR 826

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             K GA  +G+V +P GDE  L+ AVA++GPV+++IDAS +SF  Y EGVY + +C+   
Sbjct: 827 PPKIGATCQGFVRVPAGDEVGLQKAVASVGPVTVSIDASLKSFYLYKEGVYDDKKCSKKM 886

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +H VL+VGYG    G +YWLVKNSW  ++G +GYI MARN+
Sbjct: 887 FNHFVLIVGYG-KHLGKEYWLVKNSWGMSFGMDGYIMMARNQ 927


>gi|149039746|gb|EDL93862.1| rCG24317, isoform CRA_b [Rattus norvegicus]
          Length = 143

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/110 (55%), Positives = 77/110 (70%), Gaps = 1/110 (0%)

Query: 55  SGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVY 114
           S +  CRY    S A   G++ IP   E  L  AVAT+GP+S+ ID  H+SFQFY  G+Y
Sbjct: 19  SKNGTCRYNPKYSAAKVVGFMSIPP-SENALMKAVATVGPISVGIDIKHKSFQFYKGGMY 77

Query: 115 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           YEP+C+ST L+HAVLVVGYG + +G  YWLVKNSW   WG +GYIKMA++
Sbjct: 78  YEPDCSSTNLNHAVLVVGYGEESDGRKYWLVKNSWGRDWGMDGYIKMAKD 127


>gi|354502591|ref|XP_003513367.1| PREDICTED: cathepsin L1-like isoform 1 [Cricetulus griseus]
          Length = 330

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 89/162 (54%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYIKDN G+DT  SYPYEA                                D  CRY 
Sbjct: 186 AFQYIKDNGGLDTSESYPYEAQ-------------------------------DGPCRYD 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P  +E  +KA VAT+GP+SI I    +S  FY  G YY+P+C +  
Sbjct: 215 PKHSAANITGFVVVPSNEEALMKA-VATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHY 273

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +H+VL+VGYG + +G  YWLVKNSW   WG +GYIK+A++R
Sbjct: 274 PNHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDR 315


>gi|334324657|ref|XP_003340546.1| PREDICTED: cathepsin S-like isoform 2 [Monodelphis domestica]
          Length = 281

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN+GID++ SYPY+A                                D  C
Sbjct: 135 MTSAFQYVIDNNGIDSDVSYPYKAT-------------------------------DGKC 163

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  A   A    Y ++P G E  LK AVA  GPVS+ IDA   SF  Y  GVYY+P C 
Sbjct: 164 QYNPASRAATCSKYTELPYGSEEALKEAVANKGPVSVGIDAKTPSFFLYKSGVYYDPSC- 222

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H VLV+GYG + +G DYWLVKNSW   +GD+GY+++ARNR
Sbjct: 223 TQKVNHGVLVIGYG-NLDGQDYWLVKNSWGLHFGDKGYVRIARNR 266


>gi|344257451|gb|EGW13555.1| Cathepsin L1 [Cricetulus griseus]
          Length = 474

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 89/162 (54%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYIKDN G+DT  SYPYEA                                D  CRY 
Sbjct: 330 AFQYIKDNGGLDTSESYPYEAQ-------------------------------DGPCRYD 358

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P  +E  +KA VAT+GP+SI I    +S  FY  G YY+P+C +  
Sbjct: 359 PKHSAANITGFVVVPSNEEALMKA-VATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHY 417

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +H+VL+VGYG + +G  YWLVKNSW   WG +GYIK+A++R
Sbjct: 418 PNHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDR 459


>gi|449472484|ref|XP_004175240.1| PREDICTED: cathepsin K-like [Taeniopygia guttata]
          Length = 178

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/108 (53%), Positives = 76/108 (70%), Gaps = 1/108 (0%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D++C Y      A  RGY +IPEG+E  LK AVA IGP+S+ IDAS  SFQFYS GVYY+
Sbjct: 56  DESCMYSPTGKAAKCRGYREIPEGNEKALKRAVARIGPISVGIDASLPSFQFYSRGVYYD 115

Query: 117 PECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             CN+  ++HAVL VGYG  + G  +W++KNSW   WG++GY+ +ARN
Sbjct: 116 ESCNAENINHAVLAVGYGA-QKGTKHWIIKNSWGEEWGNKGYVLLARN 162


>gi|354502593|ref|XP_003513368.1| PREDICTED: cathepsin L1-like isoform 2 [Cricetulus griseus]
          Length = 330

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 89/162 (54%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYIKDN G+DT  SYPYEA                                D  CRY 
Sbjct: 186 AFQYIKDNGGLDTSESYPYEAQ-------------------------------DGPCRYD 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P  +E  +KA VAT+GP+SI I    +S  FY  G YY+P+C +  
Sbjct: 215 PKHSAANITGFVVVPSNEEALMKA-VATVGPISIGISVRLRSLLFYKSGFYYDPDCYNHY 273

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +H+VL+VGYG + +G  YWLVKNSW   WG +GYIK+A++R
Sbjct: 274 PNHSVLLVGYGEESDGQKYWLVKNSWGEEWGMDGYIKIAKDR 315


>gi|348513249|ref|XP_003444155.1| PREDICTED: cathepsin K-like [Oreochromis niloticus]
          Length = 330

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +A+ Y+  N G+D+ES YPYE                     HK          +  C
Sbjct: 183 ITKAYSYVIRNGGVDSESFYPYE---------------------HK----------NGKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY           +  +PEGDE  L+  +A++GP+S+A++A  +SF  YS G+Y  P CN
Sbjct: 212 RYSVQGRAGYCSKFSILPEGDEKMLQKVLASVGPISVAVNAMLESFHMYSGGLYNVPSCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL+VGYGTD  G DYWLVKNSW T WG+ GYI++ARN+
Sbjct: 272 PKLINHAVLLVGYGTDA-GQDYWLVKNSWGTAWGEGGYIRLARNK 315


>gi|208972990|dbj|BAG74344.1| silicatein-M3 [Ephydatia fluviatilis]
          Length = 326

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 91/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTESSY ++   S                               +C+Y 
Sbjct: 182 AMKYVIDNGGIDTESSYSFQGKQS-------------------------------SCQYS 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA   G + I  G E  L AAVAT+GPV++A+DA+  +F+FY  GV+    C++T+
Sbjct: 211 SKNSGASATGVISITSGSETDLLAAVATVGPVAVAVDANTNAFRFYQSGVFDSSSCSNTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +HA+LV GYG+  NG DYWLVKNSW+  WGD GYI M RN+
Sbjct: 271 PNHAMLVTGYGS-YNGKDYWLVKNSWSKNWGDNGYILMVRNK 311


>gi|328869030|gb|EGG17408.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 379

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 88/193 (45%), Gaps = 58/193 (30%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF YI  N GIDTE SYPY A                                   C
Sbjct: 202 MNLAFDYIIKNEGIDTEDSYPYSAETG------------------------------KKC 231

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + +   GA    Y +I  GDE  L  AV   GPVS+AIDASH SFQ YS G+YYE +C+
Sbjct: 232 LFNKTNVGATISSYKNITSGDESNLADAVKNAGPVSVAIDASHNSFQLYSHGIYYEKDCS 291

Query: 121 STQLDHAVLVVGYG----------------------------TDENGNDYWLVKNSWNTT 152
           S  LDH VLVVGYG                            T  +  DYW+VKNSW +T
Sbjct: 292 SVNLDHGVLVVGYGSGDPSSLANNVGGRSGPKMVVFNNRMVKTPSSNGDYWIVKNSWGST 351

Query: 153 WGDEGYIKMARNR 165
           WG  G+I M+ NR
Sbjct: 352 WGSHGFIFMSMNR 364


>gi|3929737|emb|CAA77180.1| cathepsin L [Homo sapiens]
          Length = 175

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 35/150 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 58  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 86

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 87  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 145

Query: 121 STQLDHAVLVVGYG---TDENGNDYWLVKN 147
           S  +DH VLVVGYG   ++ + N YWLVKN
Sbjct: 146 SEDMDHGVLVVGYGFESSESDNNKYWLVKN 175


>gi|225706086|gb|ACO08889.1| Cathepsin S precursor [Osmerus mordax]
          Length = 333

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 94/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN GID+++SYPY+ +                                  C
Sbjct: 187 MSEAFQYVIDNKGIDSDTSYPYQGVQG-------------------------------TC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A    Y  +PEGDE  LK AVA IGP+S+AIDA+  SF  +  GVY +  C 
Sbjct: 216 HYNPSYRSANCTRYSFLPEGDETTLKQAVAMIGPISVAIDATRPSFILWRSGVYNDLTC- 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++HAVLVVGYGT  +G DYWLVKNSW T +G+ GYI+M+RNR
Sbjct: 275 TQKINHAVLVVGYGT-LDGQDYWLVKNSWGTRFGENGYIRMSRNR 318


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY +  +G++ E  Y Y                               T  D  C
Sbjct: 190 MPQAFQYAQ-RYGVEAEVDYRY-------------------------------TERDGVC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY++    A   GY ++PEGDE  L+ AVATIGP+S+ IDA+   F  YS GV+    C+
Sbjct: 218 RYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSKTCS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              +DH VLVVGYG  ENG+ YWLVKNSW ++WG++GY+KMARNR
Sbjct: 278 PYAIDHGVLVVGYGA-ENGDAYWLVKNSWGSSWGEDGYLKMARNR 321


>gi|348513412|ref|XP_003444236.1| PREDICTED: cathepsin S-like [Oreochromis niloticus]
          Length = 328

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +AF+Y+ DN GI +E +YPY                        R NQ         C
Sbjct: 182 IARAFKYVVDNQGIASEDAYPYIG----------------------RHNQ---------C 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A   GY  +P GDE+ LK AVA +GPV++AIDAS   F FY  GVY +  C 
Sbjct: 211 KYNPLYRAANCSGYYCLPRGDEFALKEAVALVGPVAVAIDASRPQFHFYHRGVYMDNTC- 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +++H  LVVGYG  E G DYWLVKNSW   +G+EGYIKMARNR
Sbjct: 270 TQKVNHGSLVVGYG-REKGQDYWLVKNSWGVQFGEEGYIKMARNR 313


>gi|14041143|emb|CAA71554.1| cathepsin [Geodia cydonium]
          Length = 322

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 87/164 (53%), Gaps = 32/164 (19%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AF+Y+  N GIDTE+SYPY A                                D+ C 
Sbjct: 173 DDAFKYVIKNGGIDTEASYPYVAR-------------------------------DEKCH 201

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y  A  G+    YVDI    E +L+ A AT+GP+ + IDASH  FQ Y  GVY+   C+ 
Sbjct: 202 YSSANIGSTCSSYVDIESKSEAQLQVASATVGPIPVGIDASHLGFQLYDGGVYHSDLCSQ 261

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           T+LDH VLVVGYG  +   DYW+VKNSW T WG  G + M+RNR
Sbjct: 262 TRLDHGVLVVGYGVYKE-KDYWMVKNSWGTNWGISGDMMMSRNR 304


>gi|71794531|emb|CAH10752.1| cathepsin L [Lubomirskia baicalensis]
          Length = 162

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+  N GIDTE+SYPY+A+                               D  C
Sbjct: 23  MDNAFQYVIKNGGIDTEASYPYKAV-------------------------------DQKC 51

Query: 61  RYKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           ++  A  G+   G+ DI P   E  L+ AVA +GP+S+AIDASH SFQ Y  GVY E  C
Sbjct: 52  KFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHTSFQLYKSGVYSESAC 111

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + T LDH V  VGY +  +G  YW+VKNSW TTWG  GYI M+RN+
Sbjct: 112 SQTSLDHGVTAVGYDS-SSGVAYWIVKNSWGTTWGQAGYIWMSRNK 156


>gi|8393221|ref|NP_059016.1| cathepsin S preproprotein [Rattus norvegicus]
 gi|399190|sp|Q02765.1|CATS_RAT RecName: Full=Cathepsin S; Flags: Precursor
 gi|203650|gb|AAA40994.1| cathepsin S precursor [Rattus norvegicus]
          Length = 330

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/165 (46%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI D   ID+E+SYPY+AM                               D+ C
Sbjct: 184 MTEAFQYIIDT-SIDSEASYPYKAM-------------------------------DEKC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAID-ASHQSFQFYSEGVYYEPEC 119
            Y      A    Y+++P GDE  LK AVAT GPVS+ ID ASH SF  Y  GVY +P C
Sbjct: 212 LYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSC 271

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            +  ++H VLVVGYGT  +G DYWLVKNSW   +GD+GYI+MARN
Sbjct: 272 -TENMNHGVLVVGYGT-LDGKDYWLVKNSWGLHFGDQGYIRMARN 314


>gi|301609082|ref|XP_002934106.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +  +F+Y+K  +GI  ESSYPY                               T+ +  C
Sbjct: 188 LQASFRYMK-KYGIMEESSYPY-------------------------------TAKEGRC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +  +  +  V + +  +P G E  L   + T+GPVS+AID S + F+ Y  GVYY+P C 
Sbjct: 216 KKDKPSNVGVVKTFYVVPAGKELLLMKVLGTVGPVSVAIDCSREGFRMYKSGVYYDPYC- 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T++DHAVLVVGYGTD NG DYWLVKNSW   +GD+GYIKMARNR
Sbjct: 275 TTKVDHAVLVVGYGTD-NGKDYWLVKNSWGVGYGDKGYIKMARNR 318


>gi|66814630|ref|XP_641494.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|118121|sp|P04989.1|CYSP2_DICDI RecName: Full=Cysteine proteinase 2; AltName: Full=Prestalk
           cathepsin; Flags: Precursor
 gi|167860|gb|AAA33240.1| pst-cathepsin [Dictyostelium discoideum]
 gi|1834417|emb|CAA27050.1| cysteine proteinase 2 [Dictyostelium discoideum]
 gi|60469522|gb|EAL67513.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|225484|prf||1304284A cathepsin,prestalk
          Length = 376

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 98/201 (48%), Gaps = 67/201 (33%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF YI  N GIDTESSYPY A                                   C
Sbjct: 192 MNNAFDYIIKNKGIDTESSYPYTAETG------------------------------STC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            + ++  GA  +GYV+I  G E  L+   A  GPVS+AIDASH SFQ Y+ G+YYEP+C+
Sbjct: 222 LFNKSDIGATIKGYVNITAGSEISLENG-AQHGPVSVAIDASHNSFQLYTSGIYYEPKCS 280

Query: 121 STQLDHAVLVVGYGT---DENG---------------------------------NDYWL 144
            T+LDH VLVVGYG    D+ G                                 N+YW+
Sbjct: 281 PTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDDSSDSVRPKANNYWI 340

Query: 145 VKNSWNTTWGDEGYIKMARNR 165
           VKNSW T+WG +GYI M+++R
Sbjct: 341 VKNSWGTSWGIKGYILMSKDR 361


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 33/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+  N GIDTE+SYPY+A+                               D  C
Sbjct: 177 MDNAFQYVIKNGGIDTEASYPYKAV-------------------------------DQKC 205

Query: 61  RYKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           ++  A  G+   G+ DI P   E  L+ AVA +GP+S+AIDASH SFQ Y  GVY E  C
Sbjct: 206 KFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHTSFQLYKSGVYSESAC 265

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + T LDH V  VGY +  +G  YW+VKNSW TTWG  GYI M+RN+
Sbjct: 266 SQTSLDHGVTAVGYDSS-SGVAYWIVKNSWGTTWGQAGYIWMSRNK 310


>gi|37963625|gb|AAP94048.2| cathepsin-L-like midgut cysteine proteinase [Tenebrio molitor]
          Length = 330

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +ES+YPYEA                                 D C
Sbjct: 185 MDSAFSYIHD-YGIMSESAYPYEAQ-------------------------------GDYC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S     GY D+P GDE  L  AV   GPV++AIDA+ +  QFYS G++Y+  CN
Sbjct: 213 RFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDE-LQFYSGGLFYDQTCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + L+H VLVVGYG+D NG DYW++KNSW + WG+ GY +  RN
Sbjct: 272 QSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRN 314


>gi|410910990|ref|XP_003968973.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 329

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 97/166 (58%), Gaps = 34/166 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + +++ YI  N G+D+ES YPYE                     H++            C
Sbjct: 182 ISKSYSYIIRNGGVDSESFYPYE---------------------HQKGK----------C 210

Query: 61  RYK-RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           RY  + K+G   R ++ +P+GDE  LKA VA +GPV++A++A   SF  Y  G+Y  P C
Sbjct: 211 RYSVKGKAGYCSRFHI-LPQGDEETLKATVARVGPVAVAVNAMLASFHLYRGGLYNVPNC 269

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           N   ++HAVLVVGYG+ E G D+WLVKNSW + WG+EGYI++ARN+
Sbjct: 270 NPKFINHAVLVVGYGSSE-GQDFWLVKNSWGSAWGEEGYIRLARNK 314


>gi|198432221|ref|XP_002130541.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 330

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 93/167 (55%), Gaps = 35/167 (20%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AF YI    GI++E++YPYEA                                +D CR
Sbjct: 181 DWAFAYINQVGGIESETNYPYEAK-------------------------------NDVCR 209

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           +  ++  A   G VDI    E +L+ AV +IGPVS+ IDASH SFQ Y  G+YYE +C+S
Sbjct: 210 FNVSEVAATLTGCVDITPDSETQLEKAVGSIGPVSVLIDASHISFQLYGSGIYYEQQCSS 269

Query: 122 T--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGD-EGYIKMARNR 165
           +   LDH VL VGYG D NG +YW+VKNSW   WG   GYIKMA+N+
Sbjct: 270 SPASLDHGVLAVGYGAD-NGQEYWMVKNSWGEGWGKLGGYIKMAKNK 315


>gi|86279347|gb|ABC88769.1| putative cathepsin L-like proteinase [Tenebrio molitor]
          Length = 328

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +ES+YPYEA                                 D C
Sbjct: 183 MDSAFSYIHD-YGIMSESAYPYEAQ-------------------------------GDYC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S     GY D+P GDE  L  AV   GPV++AIDA+ +  QFYS G++Y+  CN
Sbjct: 211 RFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDE-LQFYSGGLFYDQTCN 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + L+H VLVVGYG+D NG DYW++KNSW + WG+ GY +  RN
Sbjct: 270 QSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRN 312


>gi|118140100|gb|ABK63481.1| cathepsin S [Channa argus]
          Length = 335

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ +N GI++E+SYPY  +                               +  C
Sbjct: 189 MTNAFQYVIENQGIESEASYPYIGL-------------------------------EQQC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y   +S A    Y  +PE DE  LK A+ATIGP+S+AIDAS  +F FYS GVY +P C 
Sbjct: 218 HYNPEESAANCSQYHFLPEKDEEALKEAIATIGPISVAIDASKPTFTFYSSGVYDDPTC- 276

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++H VL VGYGT ++  D WLVKNSW T +GD GYI+M+RN+
Sbjct: 277 SEVINHGVLAVGYGT-QSTQDSWLVKNSWGTYFGDSGYIRMSRNK 320


>gi|54400500|ref|NP_001005999.1| cathepsin L, like [Danio rerio]
 gi|53734591|gb|AAH83200.1| Cathepsin L, like [Danio rerio]
          Length = 261

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 97/167 (58%), Gaps = 33/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAFQY++DN+G+D+E SYPY                              + + D  C
Sbjct: 109 MDQAFQYVQDNNGLDSEESYPY------------------------------LATDDQPC 138

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    S A   G+VDIP G E+ L  AVA +GPV++AIDA H+SFQFY  G+YY   C+
Sbjct: 139 HYDPRYSAANVTGFVDIPSGKEHALMKAVAAVGPVAVAIDAGHESFQFYQSGIYYGKACS 198

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +LDH VLVVGY   G D  G  YW+VKNSW   WGD+GYI MA++
Sbjct: 199 TEELDHGVLVVGYGYEGVDVAGRRYWIVKNSWTDRWGDKGYIYMAKD 245


>gi|377656292|pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio
           Molitor Larval Midgut
          Length = 329

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +ES+YPYEA                                 D C
Sbjct: 184 MDSAFSYIHD-YGIMSESAYPYEAQ-------------------------------GDYC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S     GY D+P GDE  L  AV   GPV++AIDA+ +  QFYS G++Y+  CN
Sbjct: 212 RFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDE-LQFYSGGLFYDQTCN 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + L+H VLVVGYG+D NG DYW++KNSW + WG+ GY +  RN
Sbjct: 271 QSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRN 313


>gi|19698255|dbj|BAB86770.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 92/164 (56%), Gaps = 36/164 (21%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           DQAFQYI+ N GID+ES YPY+A +                                 C 
Sbjct: 180 DQAFQYIQANGGIDSESYYPYQARVG-------------------------------TCH 208

Query: 62  YKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           Y  A S A   GY D+ P G E  L+  VA +GP+SIAIDAS   +Q Y  GV+ +P C+
Sbjct: 209 YNSAYSAATCSGYQDVTPVGSESALQYYVANVGPLSIAIDAS--GWQSYQSGVFNDPSCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T  DHAVL+VGYGT  NG DYWLVKNSW T WG++GYI M RN
Sbjct: 267 QT-ADHAVLLVGYGT-YNGQDYWLVKNSWGTWWGEQGYIMMTRN 308


>gi|449690331|ref|XP_002168571.2| PREDICTED: cathepsin L1-like [Hydra magnipapillata]
          Length = 199

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 3/99 (3%)

Query: 69  AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST--QLDH 126
           A D G+V+IP G+E  LK AVAT+GP+S+AID S ++F+ Y  GVYYEP C +    L H
Sbjct: 87  ASDTGFVNIPSGNEDALKEAVATVGPISVAIDTSKKTFKKYKSGVYYEPTCGNALEDLTH 146

Query: 127 AVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           AVLVVGYGT E G D+WLVKNSW   WGD GYIKM+RN+
Sbjct: 147 AVLVVGYGT-EKGRDFWLVKNSWGEDWGDNGYIKMSRNK 184


>gi|86279345|gb|ABC88768.1| putative cathepsin L-like proteinase [Tenebrio molitor]
          Length = 328

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +ES+YPYEA                                DD C
Sbjct: 183 MDSAFSYIHD-YGIMSESAYPYEAQ-------------------------------DDYC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S     GY D+P GDE  L  AV   GPV++AIDA+ +  QFYS G++Y+  CN
Sbjct: 211 RFDSSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAIDATDE-LQFYSGGLFYDQTCN 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + L+H V VVGYG+D NG DYW++KNSW + WG+ GY    RN
Sbjct: 270 QSDLNHGVFVVGYGSD-NGQDYWILKNSWGSGWGENGYWTQVRN 312


>gi|71897043|ref|NP_001026516.1| cathepsin S precursor [Gallus gallus]
 gi|53126701|emb|CAG30977.1| hypothetical protein RCJMB04_1f23 [Gallus gallus]
          Length = 328

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 92/164 (56%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E SYPY A                                +  C
Sbjct: 182 MTRAFQYIIDNNGIDSEESYPYMAQ-------------------------------NGTC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  +   A    YV++P  DE  LK AVA +GPVS+AIDA+  +F  Y  GVY +P C 
Sbjct: 211 QYNVSTRAATCSKYVELPYADEAALKDAVANVGPVSVAIDATQPTFFLYRSGVYDDPRC- 269

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +++H VLVVGYGT  N  D+WLVKNSW   +GD GYI+M+RN
Sbjct: 270 TQEVNHGVLVVGYGT-LNEKDFWLVKNSWGERFGDGGYIRMSRN 312


>gi|195995651|ref|XP_002107694.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
 gi|190588470|gb|EDV28492.1| hypothetical protein TRIADDRAFT_36902 [Trichoplax adhaerens]
          Length = 544

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 81/108 (75%), Gaps = 3/108 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C+  + K GA  RG+V +P G++  LK AV+ +GPV++ +DA+ +SF FYS G+YY+
Sbjct: 420 DGKCKLNKTKIGAKIRGWVQVPHGNQSALKLAVSAVGPVAVGMDAALKSFSFYSSGIYYD 479

Query: 117 PECNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
            +C + +  LDHAVL VGYG +ENG DYW++KNSW+T WGD+GY+K++
Sbjct: 480 KQCGNKEQDLDHAVLAVGYG-NENGQDYWIIKNSWSTHWGDDGYVKLS 526


>gi|298916890|dbj|BAJ09742.1| cathepsin L [Dicyema japonicum]
          Length = 178

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 93/166 (56%), Gaps = 37/166 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+  ++Y+ +N GIDTE  YPYEA                                D+ C
Sbjct: 32  MNNVYRYVHENGGIDTEDQYPYEAT-------------------------------DNKC 60

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RYK+       +G+ +I  G+E  LK AVAT+GP+SIAIDA+  SFQFY  G+  +  C 
Sbjct: 61  RYKKNPFEV--KGFKNIQTGNETALKIAVATVGPISIAIDAT-LSFQFYENGILIDDSCR 117

Query: 121 STQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +T   LDHAVLVV YGT E G DYW++KNSW   WGD GY+KM RN
Sbjct: 118 NTPRYLDHAVLVVDYGT-ERGKDYWIIKNSWGDQWGDNGYVKMIRN 162


>gi|281207557|gb|EFA81740.1| hypothetical protein PPL_05734 [Polysphondylium pallidum PN500]
          Length = 387

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 95/214 (44%), Gaps = 80/214 (37%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  N GIDTE+SYPY A                              +G + C
Sbjct: 190 MTNAFEYVIKNGGIDTEASYPYSA------------------------------TGPNKC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  A SGA    YV++  G E  L AA A IGPVS+AIDASH SFQ Y  G+YYE +C+
Sbjct: 220 RYNPANSGATISSYVNVTVGSETALMAA-ANIGPVSVAIDASHNSFQLYDSGIYYESKCS 278

Query: 121 STQLDHAVLVVGYG---------------------------------------------- 134
           +TQLDH VLVVGYG                                              
Sbjct: 279 TTQLDHGVLVVGYGSGPADSSTGTSGSWASSGSSDSGSSTGSADSGTGSTGTGSTGSGAA 338

Query: 135 ---TDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              T     +YW+VKNSW   WG  GYI M+++R
Sbjct: 339 SLLTQAKTENYWIVKNSWGPEWGLTGYILMSKDR 372


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 93/169 (55%), Gaps = 38/169 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGD--- 57
           M+ AF+Y++DN GID+E SYPY                                SGD   
Sbjct: 217 MNSAFEYVRDNEGIDSEISYPY-------------------------------VSGDGTE 245

Query: 58  -DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
            + C +  +   A   GYV+I EGDE  L  AVAT GPVS+AI+A   SF  Y  G+Y +
Sbjct: 246 NNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSD 305

Query: 117 PECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            +C  T   LDH VLVVGYG +ENG  YWL+KNSW   WG++GYIK+++
Sbjct: 306 TDCEGTLDALDHGVLVVGYG-EENGRSYWLIKNSWGEEWGEKGYIKISK 353


>gi|333830589|gb|AEG20937.1| ctsk [Danio rerio]
          Length = 284

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 81/157 (51%), Gaps = 31/157 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+ +N GID+E SYPY                                  D  C
Sbjct: 159 MTNAFRYVSNNQGIDSEESYPY-------------------------------VGTDQQC 187

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  RGY +IP+G+E  L AAVA +GPVS+ IDA   +F +Y  GVYY+P CN
Sbjct: 188 AYNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCN 247

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
              ++HAVL VGYG    G  YW+VKNSW   WG +G
Sbjct: 248 KEDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKG 284


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 90/165 (54%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY +  +G++ E  Y Y                               T  D  C
Sbjct: 190 MPQAFQYAQ-RYGVEAEVDYRY-------------------------------TERDGVC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY++    A   GY ++PEGDE  L+ AVATIGP+S+ IDA+   F  YS GV+    C+
Sbjct: 218 RYRQDLVVANVTGYAELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSKTCS 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              +DH VLVVGYG  ENG  YWLVKNSW ++WG+ GY+KMARNR
Sbjct: 278 PYAIDHGVLVVGYGA-ENGEAYWLVKNSWGSSWGEGGYVKMARNR 321


>gi|340370384|ref|XP_003383726.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 337

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 90/166 (54%), Gaps = 32/166 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M ++F+YI DN GID E  Y Y                               T     C
Sbjct: 190 MYESFRYIIDNDGIDREDGYKY-------------------------------TGRQGQC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++ R   G    G + IP G E +L++A+AT GPVS+AID S  +F+FY +GV+ EP C+
Sbjct: 219 KFDRKAIGGRQVGIIHIPTGSEAELQSALATAGPVSVAIDGSSNAFRFYEKGVFDEPNCS 278

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
           +T+L HA L++GYG  + G  YWLVKNSW   WG +GYI MARN+ 
Sbjct: 279 TTKLTHAGLIIGYGK-KKGKPYWLVKNSWGPHWGMKGYIMMARNKA 323


>gi|333830587|gb|AEG20936.1| ctsk [Danio rerio]
          Length = 284

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 81/157 (51%), Gaps = 31/157 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+ +N GID+E SYPY                                  D  C
Sbjct: 159 MTNAFRYVSNNQGIDSEESYPY-------------------------------VGTDQQC 187

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y  +   A  RGY +IP+G+E  L AAVA +GPVS+ IDA   +F +Y  GVYY+P CN
Sbjct: 188 AYNTSGVAASCRGYKEIPQGNERALTAAVANVGPVSVGIDAMQSTFLYYKSGVYYDPNCN 247

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
              ++HAVL VGYG    G  YW+VKNSW   WG +G
Sbjct: 248 KEDVNHAVLAVGYGATPRGKKYWIVKNSWGEEWGKKG 284


>gi|197205900|gb|ACH48003.1| cathepsin [Latrunculia oparinae]
          Length = 351

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 91/160 (56%), Gaps = 32/160 (20%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
             Y  DN GID  SSYPY          L R+  YL                   C++  
Sbjct: 208 IMYAVDNGGIDGTSSYPY----------LGRQ--YL-------------------CKFTE 236

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
                   G V I  G E  LK AVA +GPV++A+D+ H SFQFY+ G+Y EP C+ T+L
Sbjct: 237 ESIATGCTGMVRIKRGKEQDLKKAVAVVGPVTVAVDSRHTSFQFYASGIYSEPSCSRTKL 296

Query: 125 DHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            H ++++GYG+ ++G+DYWL+KNSW T+WG++GYI M+RN
Sbjct: 297 THTLIIIGYGS-KSGHDYWLLKNSWGTSWGEDGYIMMSRN 335


>gi|211910923|gb|ACJ13090.1| cathepsin L [Globodera rostochiensis]
          Length = 295

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/135 (48%), Positives = 77/135 (57%), Gaps = 30/135 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 191 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE +LK AVAT GPVS+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 221 LFKRNDVGATDTGFFDIAEGDEERLKIAVATQGPVSVAIDAGHRSFQLYTHGVYFEKECS 280

Query: 121 STQLDHAVLVVGYGT 135
              LDH VLVVGYGT
Sbjct: 281 PENLDHGVLVVGYGT 295


>gi|281204396|gb|EFA78592.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 330

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 87/165 (52%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD A +Y+    G+DTE SYPY    S+                               C
Sbjct: 183 MDAAMKYVIAQGGLDTEESYPYTMSDSY------------------------------TC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  A  GA    Y+D+  G E  L AA    GPVS+AIDASH SFQ Y  GVYYEP C+
Sbjct: 213 KFNPANIGAKISSYIDVQRGSETDL-AAKLNKGPVSVAIDASHSSFQLYKSGVYYEPACS 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  LDH VL VGYGT E  ++YW+VKNSW   WG  GYI MA+++
Sbjct: 272 SYNLDHGVLAVGYGT-EGSSNYWIVKNSWGPNWGLSGYIWMAKDK 315


>gi|54020908|ref|NP_001005695.1| cathepsin S precursor [Xenopus (Silurana) tropicalis]
 gi|49522293|gb|AAH75261.1| cathepsin S [Xenopus (Silurana) tropicalis]
          Length = 333

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M QAFQY+ DN GID++S YPY AM                               D+ C
Sbjct: 187 MTQAFQYVIDNKGIDSDSYYPYHAM-------------------------------DEKC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      +    Y +I  G E  LK A+ +IGP+S+AID +  SF  Y  GVY +P C 
Sbjct: 216 HYDPTGKASTCAKYTEIVPGTEDNLKQALGSIGPISVAIDGTRPSFFLYRSGVYSDPTC- 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL VGYG + NG D+WL+KNSW T +GD+GY+++ARN+
Sbjct: 275 SHEVNHGVLAVGYG-NLNGQDFWLLKNSWGTKYGDQGYVRIARNK 318


>gi|19698257|dbj|BAB86771.1| cathepsin L-like [Engraulis japonicus]
          Length = 324

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/164 (46%), Positives = 92/164 (56%), Gaps = 36/164 (21%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           D AFQY++ N GID+ES YPY+A +                                 C 
Sbjct: 180 DHAFQYVQANGGIDSESYYPYQARVG-------------------------------TCH 208

Query: 62  YKRAKSGAVDRGYVDI-PEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           Y  A S A   GY D+ P G E  L+  VA +GP+SIAIDAS   +Q Y  GV+ +P C+
Sbjct: 209 YNSAYSAATCSGYQDVTPVGSESALQYYVANVGPLSIAIDAS--GWQSYQSGVFNDPSCS 266

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T  DHAVL+VGYGT  NG DYWLVKNSW T WG++GYI MARN
Sbjct: 267 QT-ADHAVLLVGYGT-YNGQDYWLVKNSWGTWWGEQGYIMMARN 308


>gi|337255596|gb|AEI61876.1| cathepsin K [Gadus morhua]
          Length = 331

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 82/165 (49%), Gaps = 31/165 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF Y+  N GID++ SYPY                                  D  C
Sbjct: 183 MTNAFSYVMQNGGIDSDESYPY-------------------------------VGQDQQC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +  +   A  +GY  IP GDE  L  A+   GPVS+ IDA   +FQFY  GVYY+  CN
Sbjct: 212 GFNVSGVAAECKGYKQIPVGDERALAVALFKAGPVSVGIDAGLGTFQFYQHGVYYDRNCN 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  ++HAVL VG+G    G  YW++KNSW   WG +GYI MARNR
Sbjct: 272 AEDINHAVLAVGFGVTAKGKKYWIIKNSWGEDWGHKGYILMARNR 316


>gi|410990002|ref|XP_004001239.1| PREDICTED: cathepsin L1-like isoform 1 [Felis catus]
          Length = 333

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+D+E SYPY A +                                +C
Sbjct: 183 MGNAFQYVKDNGGLDSEESYPYHAQL-------------------------------QSC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A   G++ IP+  EYKL  +VA +GPVS AIDAS  +F+FY +G+YY+  C+
Sbjct: 212 KYNPESSAADITGFLTIPK-TEYKLMRSVAIVGPVSAAIDASLDTFRFYDQGIYYDSNCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L H VL+VGY   G + +   YW+VKNSW   WG +GYI MA++R
Sbjct: 271 HEILHHGVLIVGYGFEGAELDNKKYWIVKNSWGEAWGIDGYILMAKDR 318


>gi|340370386|ref|XP_003383727.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 388

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           + A  YI DN GID E +YPY A                                 D CR
Sbjct: 242 EAALMYILDNDGIDKEKAYPYIA-------------------------------SQDTCR 270

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           ++  + GAV RG V I +G+   L+AAVA +GPV+ +ID  H +F+FYS G++   +C++
Sbjct: 271 FRVDEIGAVVRGMVKIKKGNVSNLQAAVALVGPVTTSIDHQHNAFRFYSSGIFTTRKCSN 330

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA-RNR 165
            ++ H +L+VGYG  ENG  YWL+KNSW   WG  GY+KMA RNR
Sbjct: 331 KKMTHEMLIVGYG-KENGKSYWLLKNSWGPNWGISGYMKMAKRNR 374


>gi|74917819|sp|Q6YD92.1|SILIC_PETFI RecName: Full=Silicatein; Flags: Precursor
 gi|37724090|gb|AAO23671.1| silicatein [Petrosia ficiformis]
          Length = 339

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 32/163 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           ++ AF Y+ DN G+DT SSYPY +   +                               C
Sbjct: 192 VNNAFMYVIDNGGLDTTSSYPYVSRQYY-------------------------------C 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++K +  GA   G V I  GDE  L++A+AT GPV++ IDASH SFQFY  GV   P C+
Sbjct: 221 KFKSSGVGATATGIVTISSGDESSLESALATAGPVAVYIDASHSSFQFYKYGVLNVPNCS 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            ++L HA++++GYGT  +   YWL+KNSW   WG  GYIKM+R
Sbjct: 281 RSKLSHAMILIGYGTTSS-KKYWLLKNSWGPNWGISGYIKMSR 322


>gi|61200410|gb|AAX39778.1| cathepsin R [Mus musculus]
          Length = 335

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQY+  N G+++E++YPYE                                 D  CRY 
Sbjct: 188 AFQYVLHNGGLESEATYPYEGK-------------------------------DGPCRYN 216

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P+ ++  L AAVATIGP++  IDASH+SF+ Y  G+Y+EP C+S  
Sbjct: 217 PKNSKAEITGFVSLPQSEDI-LMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDT 275

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H VLVVGY   G + +GN YWL+KNSW   WG  GY+K+A+++
Sbjct: 276 VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDK 320


>gi|9931986|ref|NP_064680.1| cathepsin R precursor [Mus musculus]
 gi|23813621|sp|Q9JIA9.1|CATR_MOUSE RecName: Full=Cathepsin R; Flags: Precursor
 gi|9623188|gb|AAF90051.1|AF245399_1 cathepsin R [Mus musculus]
 gi|12837970|dbj|BAB24023.1| unnamed protein product [Mus musculus]
 gi|12852278|dbj|BAB29345.1| unnamed protein product [Mus musculus]
 gi|16445015|gb|AAK00507.1| cathepsin R precursor [Mus musculus]
 gi|71682221|gb|AAI00339.1| Cathepsin R [Mus musculus]
 gi|148709367|gb|EDL41313.1| cathepsin R [Mus musculus]
          Length = 334

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQY+  N G+++E++YPYE                                 D  CRY 
Sbjct: 187 AFQYVLHNGGLESEATYPYEGK-------------------------------DGPCRYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P+ ++  L AAVATIGP++  IDASH+SF+ Y  G+Y+EP C+S  
Sbjct: 216 PKNSKAEITGFVSLPQSEDI-LMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDT 274

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H VLVVGY   G + +GN YWL+KNSW   WG  GY+K+A+++
Sbjct: 275 VTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDK 319


>gi|147903593|ref|NP_001080822.1| cathepsin S precursor [Xenopus laevis]
 gi|33417128|gb|AAH56059.1| Ctss-a protein [Xenopus laevis]
          Length = 333

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN+GID++S YPY AM                               D+ C
Sbjct: 187 MTSAFQYVIDNNGIDSDSYYPYHAM-------------------------------DEKC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+ A   +    Y +I  G E  LK A+ TIGP+S+AID +  +F  Y  GVY +P C 
Sbjct: 216 HYELAGKASSCVKYTEIVPGTEDNLKQALGTIGPISVAIDGTRPTFFLYKSGVYSDPSC- 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL +GYGT  NG D+WL+KNSW T +GD+G++++ARN+
Sbjct: 275 SQEVNHGVLAIGYGT-LNGQDFWLLKNSWGTYYGDKGFVRIARNK 318


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 96/178 (53%), Gaps = 36/178 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD A+Q++  NHGIDTE+ YPY+A                                D +C
Sbjct: 182 MDYAYQFVISNHGIDTENDYPYQAR-------------------------------DGSC 210

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           R  + +   V   GY DIP  DE KL  AVA   PVS+ I  S ++FQ YS+G++  P  
Sbjct: 211 RKDKLQRNVVTIDGYADIPSNDEGKLLQAVAA-QPVSVGICGSERAFQLYSKGIFSGP-- 267

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQL 177
            ST LDHAVL+VGYG+ ENG DYW+VKNSW  +WG +GY+ M RN    E  C   +L
Sbjct: 268 CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGKSWGMDGYMHMQRNSGNSEGVCGINKL 324



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 6/80 (7%)

Query: 154 GDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIK 213
           G E   ++    ++  P   ST LDHAVL+VGYG+ ENG DYW+VKNSW  +WG +GY+ 
Sbjct: 251 GSERAFQLYSKGIFSGP--CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGKSWGMDGYMH 307

Query: 214 MARNRENN---CGVASSASF 230
           M RN  N+   CG+   AS+
Sbjct: 308 MQRNSGNSEGVCGINKLASY 327


>gi|28194645|gb|AAO33584.1|AF479266_1 cathepsin P [Mesocricetus auratus]
          Length = 286

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +A++Y+  N G++ E +YPYEA                                +  CRY
Sbjct: 137 RAYKYVLHNGGLEAEETYPYEAK-------------------------------EGPCRY 165

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               S A    +V +P  ++Y L  AVATIGPVS A+DASH SF+FY+ G+Y+EP C+S 
Sbjct: 166 NPENSRAYITEFVTLPANEDY-LMVAVATIGPVSAAVDASHDSFRFYNGGIYHEPNCSSY 224

Query: 123 QLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +HAVLVVGYG + N   GN+YWL+KNSW   WG  GY+K+A++R
Sbjct: 225 VTNHAVLVVGYGFEGNETDGNNYWLIKNSWGEGWGINGYMKIAKDR 270


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 93/169 (55%), Gaps = 38/169 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGD--- 57
           M+ AF+Y++DN GID+E SYPY                                SGD   
Sbjct: 217 MNSAFEYVRDNEGIDSEISYPY-------------------------------VSGDGTE 245

Query: 58  -DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
            + C +  +   A   GYV+I EGDE  L  AVAT GPVS+AI+A   SF  Y  G+Y +
Sbjct: 246 NNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSD 305

Query: 117 PECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            +C  T   LDH VLVVGYG +ENG  YWL+KNSW   WG++GYIK+++
Sbjct: 306 TDCEGTLDALDHGVLVVGYG-EENGRSYWLIKNSWGEEWGEKGYIKISK 353


>gi|330805275|ref|XP_003290610.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
 gi|325079249|gb|EGC32858.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
          Length = 334

 Score =  125 bits (315), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 88/164 (53%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI DN GI TE +YPY                               T+  + C
Sbjct: 188 MTSAFKYIIDNDGIATEEAYPY-------------------------------TATQNRC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y     G    GY D+P G E  L AA++   PV++AIDAS  +FQ Y  GVY E  C+
Sbjct: 217 VYNTTMLGTAISGYKDVPRGSESALTAAISK-QPVAVAIDASPITFQLYKSGVYQEATCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S +L+H VL VGYGT E G DY++VKNSW  TWG++GYI MARN
Sbjct: 276 SYRLNHGVLAVGYGTLE-GKDYYIVKNSWAETWGNQGYILMARN 318


>gi|73946536|ref|XP_541257.2| PREDICTED: cathepsin L1 [Canis lupus familiaris]
          Length = 333

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AFQY+KDN G+D+E SYPY A                                ++ C
Sbjct: 183 MEYAFQYVKDNGGLDSEESYPYLAR-------------------------------NEPC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+  KS A    +  I   +E  L   VAT+GPVS A+D+S QSFQFY +G+YY+P+C+
Sbjct: 212 KYRPEKSAANVTAFWPILN-EEDGLMTTVATVGPVSAAVDSSPQSFQFYKKGIYYDPKCS 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +  L+H VLVVGY   G + +   YW+VKNSW T WG +GY+ +A++R
Sbjct: 271 NKLLNHGVLVVGYGFEGAESDNKKYWIVKNSWGTNWGMQGYMLLAKDR 318


>gi|347546079|gb|AEP03187.1| cathepsin L [Diuraphis noxia]
          Length = 144

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/127 (50%), Positives = 75/127 (59%), Gaps = 31/127 (24%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YIK N G+DTE SYPYEA                                DD C
Sbjct: 49  MDNAFKYIKSNKGLDTEKSYPYEAE-------------------------------DDKC 77

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY    SGA D+G+VDIPEGDE  L  A+AT+GPVSIAIDAS + FQFY +GV+Y P C+
Sbjct: 78  RYNPENSGATDKGFVDIPEGDEEALMHALATVGPVSIAIDASSEKFQFYKKGVFYNPHCS 137

Query: 121 STQLDHA 127
           ST+LDH 
Sbjct: 138 STELDHG 144


>gi|208972996|dbj|BAG74347.1| silicatein-G2 [Ephydatia fluviatilis]
          Length = 326

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 92/162 (56%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+ DN GIDTES+Y Y+   S                               +C++ 
Sbjct: 182 ALKYVVDNGGIDTESTYAYKERQS-------------------------------SCQFN 210

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
               GA   G V I    E +L AAVAT+GPV++A+DA+  +F++Y  G++    C+ST+
Sbjct: 211 SKYIGATASGVVAISSSSESELMAAVATMGPVAVAVDANTYAFRYYQSGIFSSSACSSTK 270

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA++V GYGT  +G DYWLVKNSW + WG+ GYI MARN+
Sbjct: 271 LNHAMVVTGYGTS-SGKDYWLVKNSWGSNWGNGGYIMMARNK 311


>gi|301609084|ref|XP_002934126.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 340

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           + ++F+Y+K  +G+  ES+YPY                               T  +  C
Sbjct: 188 LSKSFEYMK-KYGVMEESAYPY-------------------------------TGKEGQC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           + K+  +  V   +  +  G+E  LK  V TIGPVS+AIDAS Q F+ Y  GVYY+P C 
Sbjct: 216 KRKKPSNTGVVNQFYRLHAGNETALKNVVGTIGPVSVAIDASRQGFRMYKSGVYYDP-CC 274

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +T+++HAVLVVGYGTD NG  YW VKNSW   +GD+GYIKMARNR
Sbjct: 275 TTEVNHAVLVVGYGTD-NGKAYWRVKNSWGIGFGDKGYIKMARNR 318


>gi|148224682|ref|NP_001086670.1| cathepsin S [Xenopus laevis]
 gi|50418223|gb|AAH77285.1| Ctss-prov protein [Xenopus laevis]
          Length = 320

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 93/165 (56%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQY+ DN+GID+++ YPY AM                               D+ C
Sbjct: 174 MTRAFQYVIDNNGIDSDTYYPYHAM-------------------------------DEKC 202

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y+ A   +    Y +I  G E  LK A+  IGP+S+AID +  +F  Y  GVY +P C 
Sbjct: 203 HYELAGKASSCVKYREIVPGTEDNLKQALGNIGPISVAIDGTRPTFFLYKSGVYSDPSC- 261

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++H VL VGYGT  NG D+WL+KNSW T +GD+GY+++ARN+
Sbjct: 262 SQEVNHGVLAVGYGT-LNGQDFWLLKNSWGTKYGDQGYVRIARNK 305


>gi|440800456|gb|ELR21495.1| cathepsin Llike proteinase [Acanthamoeba castellanii str. Neff]
          Length = 557

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 90/164 (54%), Gaps = 35/164 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A Q++ DN GI  E SYPY  +M                              D  C   
Sbjct: 412 AIQWVIDNGGIALEESYPY--LMQ-----------------------------DAWCLKT 440

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC--NS 121
              SG   + YV++    E  L+ AVAT GPV++AIDASH  F FYS GV+Y  EC  ++
Sbjct: 441 DRSSGVKVQAYVNV-SASEAALQMAVATAGPVAVAIDASHPEFLFYSSGVFYLAECKNDA 499

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             LDH VL VGYGT ENG DYWLVKNSW+T WG+ GY+KMARNR
Sbjct: 500 NDLDHEVLAVGYGT-ENGQDYWLVKNSWSTHWGENGYVKMARNR 542


>gi|28932706|gb|AAO60047.1| midgut cysteine proteinase 4 [Rhipicephalus appendiculatus]
          Length = 345

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 29/165 (17%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++D  G+DTE+ YPY    +F   F               SN           
Sbjct: 196 MPGAFQYVQDAGGLDTEARYPYRQGTNFQCQF---------------SNSF--------- 231

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
               A+  +V+ G+  +P  +E  L+ AVA +GP+SIAI+AS Q+F FY  G+Y EP C+
Sbjct: 232 ---EARRVSVN-GHTRVPPRNERVLQDAVANVGPISIAINASPQTFMFYKNGIYGEPNCD 287

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L+HAVL+VGYG +E G  YW+VKNSW   WG+ GYIK+ RNR
Sbjct: 288 PRGLNHAVLLVGYG-EERGVPYWIVKNSWGPGWGEGGYIKILRNR 331


>gi|340369133|ref|XP_003383103.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 340

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 87/165 (52%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           ++ AF Y+ DN G+DTE+ YPY                                S  D C
Sbjct: 193 VNNAFMYVIDNGGLDTENVYPY-------------------------------VSKQDGC 221

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++K    GA   G + I  GDE  L +A+AT GPV++ IDASH SFQFY  GV   P C+
Sbjct: 222 KFKSNGIGATATGIIRIASGDETSLASALATAGPVAVYIDASHSSFQFYHYGVLNVPNCS 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T L HA++++GYG    G +YWL+KNSW   WG  GYI M++ +
Sbjct: 282 RTNLSHAMILIGYG-KYGGREYWLLKNSWGPNWGTAGYIMMSKGK 325


>gi|194741328|ref|XP_001953141.1| GF17358 [Drosophila ananassae]
 gi|190626200|gb|EDV41724.1| GF17358 [Drosophila ananassae]
          Length = 329

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 85/162 (52%), Gaps = 32/162 (19%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +AF  IK   GI TESSY YEA                                   CR 
Sbjct: 184 RAFLDIKKEGGIATESSYSYEATQKL-------------------------------CRL 212

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
             A  GA D G+V +  G+E +L  AVAT+GP+++++D+S   F  Y  G+Y  P C+ T
Sbjct: 213 NNATFGASDTGFVQLEFGNETQLAIAVATVGPIAVSLDSSSILFHLYHSGIYDNPLCSDT 272

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            L HA LVVGYGT E G DYWLVKNSW   WG+ GYIKM RN
Sbjct: 273 NLIHAALVVGYGT-EKGIDYWLVKNSWGEHWGENGYIKMRRN 313


>gi|110349475|gb|ABG73218.1| cathepsin L 2 precursor [Diaprepes abbreviatus]
          Length = 348

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YIK+N GIDTE SYPY                               T+ D  C
Sbjct: 204 MHWAFGYIKENGGIDTEQSYPY-------------------------------TAKDGRC 232

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            YK     A     + +P G E +L A V+++GP+SIA + SH+ FQFY  GVY EP+C 
Sbjct: 233 AYKPGNKAATVSQVIMVPRG-ENQLAAKVSSVGPISIAAEVSHK-FQFYHSGVYDEPQCG 290

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + L+HA+L VGYG+   G ++WLVKNSW T WGD+GYI+MA+++
Sbjct: 291 HS-LNHAMLAVGYGS-MGGKNFWLVKNSWGTGWGDQGYIRMAKDK 333


>gi|386364446|emb|CCH03784.1| Clan CA, family C1, cathepsin L-like cysteine peptidase, partial
           [Trichomonas gallinae]
          Length = 260

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYI--KDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDD 58
           MD AF Y+    N   +TE+ YPY A+                               D 
Sbjct: 128 MDAAFDYVIASQNGQFNTEADYPYTAV-------------------------------DG 156

Query: 59  NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
           +C+Y  AK+ +   GYV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+Y E  
Sbjct: 157 SCKYSAAKATSKVTGYVNVVEGDEADLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESA 216

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           C+S  LDH V  VGYGT E   +YW+V+NSW T+WG++GYI+M +
Sbjct: 217 CSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTSWGEKGYIRMIK 260


>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera]
          Length = 341

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 93/173 (53%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIEQNHGLTTEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AVA   P+++AIDAS   FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVAH-QPIAVAIDASGSEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW+T WG+EGYI+M R+    E  C
Sbjct: 279 G-TELDHGVAAVGYGTSDDGMKYWLVKNSWSTGWGEEGYIRMQRDVTVKEGLC 330


>gi|358334194|dbj|GAA34712.2| cathepsin L [Clonorchis sinensis]
          Length = 401

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 85/157 (54%), Gaps = 27/157 (17%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+K  HGI TE+ YPY +  +  P                          +  C
Sbjct: 234 MDNAFKYVKHTHGITTETKYPYISGETGTP--------------------------NPRC 267

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +      A   G VD+P  +E+ LK AV   GP+S+AI AS +SF  Y  GVY + EC+
Sbjct: 268 EFHGQAIAATVTGIVDLPRSNEFALKQAVGLHGPISVAIHASLESFMGYKSGVYSDEECS 327

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
           S QLDHAVLVVGYG +ENG  YWL+KNSW   WG+ G
Sbjct: 328 SDQLDHAVLVVGYG-EENGIPYWLIKNSWGFDWGEMG 363


>gi|170580338|ref|XP_001895218.1| Papain family cysteine protease containing protein [Brugia malayi]
 gi|158597903|gb|EDP35920.1| Papain family cysteine protease containing protein [Brugia malayi]
          Length = 314

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 42/172 (24%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           DQAF+Y+  N GIDTE SYPY+                                  + CR
Sbjct: 157 DQAFEYVVKNDGIDTEKSYPYQGY-------------------------------QNTCR 185

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
           Y  +  G        +PEGDE +L+AA+ATIGP+S+A+DA  +  +FY  G++   +C +
Sbjct: 186 YSNSTRGTTAYAGKLLPEGDELQLQAAIATIGPISVAVDA--KLMKFYRRGIFSTSKC-T 242

Query: 122 TQLDHAVLVVGYGTDE----NGN----DYWLVKNSWNTTWGDEGYIKMARNR 165
           T++ HA+L VGYGT+E    NG     DYWL+KNSW+  WG  GY+K+ARN+
Sbjct: 243 TRMGHALLAVGYGTEEVKLQNGTKKSVDYWLLKNSWSKRWGIGGYLKLARNQ 294


>gi|170594953|ref|XP_001902188.1| Cathepsin L-like precursor [Brugia malayi]
 gi|158590269|gb|EDP28964.1| Cathepsin L-like precursor, putative [Brugia malayi]
          Length = 334

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 86/165 (52%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   FQY    +GI  ES YPY  +                                  C
Sbjct: 190 MVPVFQYA-SRYGIAMESRYPYVGV-------------------------------QQRC 217

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+++  + A D G+ +IP GDE  LK AVA  GPV + I  S +SF+FY  GVY E  C 
Sbjct: 218 RWQQNIAVARDNGFNEIPPGDELALKHAVAKHGPVVVGISGSKRSFRFYKNGVYSERNCG 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             QLDHAVLVVGYGTD +  DYW+VKNSW   WG +GYI MARNR
Sbjct: 278 --QLDHAVLVVGYGTDRSYGDYWIVKNSWGAEWGKDGYIYMARNR 320


>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 93/173 (53%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIEQNHGLTTEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AVA   P+++AIDAS   FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVAH-QPIAVAIDASGSEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW+T WG+EGYI+M R+    E  C
Sbjct: 279 G-TELDHGVAAVGYGTSDDGMKYWLVKNSWSTGWGEEGYIRMQRDVTAKEGLC 330


>gi|410990004|ref|XP_004001240.1| PREDICTED: cathepsin L1-like isoform 2 [Felis catus]
          Length = 334

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 93/168 (55%), Gaps = 34/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+KDN G+D+E SYPY                      H +  Q        +C
Sbjct: 183 MGNAFQYVKDNGGLDSEESYPY----------------------HAQDLQ--------SC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A   G++ IP+  EYKL  +VA +GPVS AIDAS  +F+FY +G+YY+  C+
Sbjct: 213 KYNPESSAADITGFLTIPK-TEYKLMRSVAIVGPVSAAIDASLDTFRFYDQGIYYDSNCS 271

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              L H VL+VGY   G + +   YW+VKNSW   WG +GYI MA++R
Sbjct: 272 HEILHHGVLIVGYGFEGAELDNKKYWIVKNSWGEAWGIDGYILMAKDR 319


>gi|432853333|ref|XP_004067655.1| PREDICTED: cathepsin L2-like [Oryzias latipes]
          Length = 352

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  A+ Y+  N G+ T  SYPY ++ +  P F   RL     + H +             
Sbjct: 205 MASAYDYVLSN-GLQTTDSYPYTSVDT-QPCFYDSRL----AVAHIKD------------ 246

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y  IP+GDE  L  AVATIGP+++AIDA H SF FYS G+Y EP C+
Sbjct: 247 -------------YRFIPQGDEQALADAVATIGPITVAIDADHASFLFYSSGIYDEPNCD 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             +L HAVL+VGYG++E G DYW++KNSW ++WG+ GY+++ RN
Sbjct: 294 PNRLSHAVLLVGYGSEE-GQDYWIIKNSWGSSWGEGGYMRIIRN 336


>gi|348504496|ref|XP_003439797.1| PREDICTED: digestive cysteine proteinase 2-like [Oreochromis
           niloticus]
          Length = 352

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 39  YLLTICHKRSNQVTVTSGDDN-CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSI 97
           Y+++   + SN    TS D   C Y  + + A  R Y  IP GDE  +  A+ATIGP+++
Sbjct: 211 YVVSNGLESSNTYPYTSVDTQPCFYDSSLAVAHIRDYRFIPRGDEQAMADALATIGPITV 270

Query: 98  AIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
            IDA H SF FYS G+Y EP CN   L+HAVL+VGYG+ E G DYW++KNSW T WG+ G
Sbjct: 271 TIDADHASFLFYSSGIYDEPNCNPNNLNHAVLLVGYGSQE-GQDYWIIKNSWGTGWGEGG 329

Query: 158 YIKMARN 164
           Y+++ RN
Sbjct: 330 YMRIVRN 336


>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas]
          Length = 441

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 93/165 (56%), Gaps = 36/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ++ DNHGIDTE  YPY+                                 D +C
Sbjct: 186 MDYAFQFVIDNHGIDTEEDYPYQGR-------------------------------DRSC 214

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             ++ K   V   GYVD+P+ +E +L  AVA   PVS+ I  S ++FQ YS+G++  P  
Sbjct: 215 NKEKLKRHVVTIDGYVDVPQNNEKELLKAVAN-QPVSVGICGSERAFQLYSKGIFTGP-- 271

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            ST LDHAVL+VGYG+ ENG DYW+VKNSW + WG +GY+ M RN
Sbjct: 272 CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGSYWGMDGYMHMQRN 315



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 12/122 (9%)

Query: 119 CNSTQLD-HAVLVVGYGTDENGNDYWLVKNSWNT-----TWGDEGYIKMARNRVYYEPEC 172
           CN  +L  H V + GY      N+  L+K   N        G E   ++    ++  P  
Sbjct: 214 CNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQPVSVGICGSERAFQLYSKGIFTGP-- 271

Query: 173 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSAS 229
            ST LDHAVL+VGYG+ ENG DYW+VKNSW + WG +GY+ M RN  ++   CG+   AS
Sbjct: 272 CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGSYWGMDGYMHMQRNSGSSRGLCGINMLAS 330

Query: 230 FP 231
           +P
Sbjct: 331 YP 332


>gi|301612003|ref|XP_002935514.1| PREDICTED: cathepsin K-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+K N GID+E +YPY  M                               D  C
Sbjct: 184 MTTAFKYVKKNKGIDSEEAYPYVGM-------------------------------DQKC 212

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y  +   A  +G+ ++ +G E  LK AV  +GP+S+ IDA   +F  Y +G+YY+  C+
Sbjct: 213 KYNVSGRAAEIKGFKEVKKGSETALKKAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCD 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              ++HAVL VGYG  + G  YW++KNSW   WG++GYI MAR +
Sbjct: 273 GDSINHAVLAVGYGKQKKGK-YWIIKNSWGEDWGNKGYILMAREK 316


>gi|224085750|ref|XP_002307688.1| predicted protein [Populus trichocarpa]
 gi|222857137|gb|EEE94684.1| predicted protein [Populus trichocarpa]
          Length = 436

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 89/165 (53%), Gaps = 36/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ++ +NHGIDTE  YPY A                                D  C
Sbjct: 182 MDYAFQFVINNHGIDTEEDYPYRAR-------------------------------DGTC 210

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              R K   V    YVD+PE +E +L  AVA   PVS+ I  S ++FQ YS+G++  P  
Sbjct: 211 NKDRMKRRVVTIDKYVDVPENNEKQLLQAVAA-QPVSVGICGSERAFQMYSKGIFTGP-- 267

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            ST LDHAVL+VGYG+ ENG DYW+VKNSW T WG  GY+ M RN
Sbjct: 268 CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGTGWGMRGYMHMQRN 311



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 6/82 (7%)

Query: 154 GDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIK 213
           G E   +M    ++  P   ST LDHAVL+VGYG+ ENG DYW+VKNSW T WG  GY+ 
Sbjct: 251 GSERAFQMYSKGIFTGP--CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGTGWGMRGYMH 307

Query: 214 MARNRENN---CGVASSASFPL 232
           M RN  N+   CG+   AS+P+
Sbjct: 308 MQRNSGNSQGVCGINMLASYPV 329


>gi|301628908|ref|XP_002943589.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 307

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +++AF+Y+K  +G+  ES+YPY                                     C
Sbjct: 161 IEKAFKYMKK-YGVMEESAYPYTGQKGL-------------------------------C 188

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R K+  +  V +   D+P G+E  L   V TIGPVS++I+AS + F  +  GVYY P+C 
Sbjct: 189 RKKQPGNIGVVKAIHDLPSGNETLLMNTVGTIGPVSVSINASSEKFHQFKSGVYYNPDCL 248

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +++HAVLVVGYG  ENG DYWLVKNSW   +G+ GYIKMARNR
Sbjct: 249 PNKVNHAVLVVGYG-KENGMDYWLVKNSWGVQFGENGYIKMARNR 292


>gi|197205898|gb|ACH48002.1| silicatein B [Latrunculia oparinae]
          Length = 257

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  A+QYI  N G+DT S YPY+           R+                      +C
Sbjct: 110 MYYAYQYIIANDGVDTSSGYPYKG----------RQY---------------------SC 138

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +K    GA   G + I  GDEY L AAV++ GPV++ +DAS ++F++Y  G+Y  P C+
Sbjct: 139 SFKSKYIGAEISGSIQIKSGDEYSLMAAVSSAGPVAVGVDASSKAFRYYYSGIYNLPGCS 198

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L HA+LVVGYGT  +G +YWL KNSW T WG  GYI M+RN+
Sbjct: 199 SYSLTHALLVVGYGT-HSGRNYWLPKNSWGTNWGLSGYIMMSRNK 242


>gi|395536921|ref|XP_003770457.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin L2-like [Sarcophilus
           harrisii]
          Length = 474

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 98/168 (58%), Gaps = 13/168 (7%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +  AFQY+KDN GID+E+ YPY A   F      R+L  L+ I  K         GDD C
Sbjct: 302 LSLAFQYVKDNKGIDSENLYPYTA--EFWVGGSVRKLGLLVIIGKK-------VLGDDKC 352

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y++        G   IPE +E  L+ AV ++GP+S+AI A+  SF FY  G+YY+  C+
Sbjct: 353 QYEKDIYDINVTGIAIIPESNEKALQKAVTSVGPISVAIYAALDSFHFYKSGIYYDKYCD 412

Query: 121 STQLDHAVLVVGYGTD---ENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             + +HA LVV YG D   E  N Y +VKNSW+  WG++GYI +A++ 
Sbjct: 413 K-EFNHAXLVVDYGFDKKIEENNKYXIVKNSWDKDWGEKGYIYVAKDH 459


>gi|301609080|ref|XP_002934105.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 334

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 33/164 (20%)

Query: 2   DQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           + +F Y+K  +G+  ES+YPY                               T  +  C+
Sbjct: 189 NASFTYMK-KYGVMEESAYPY-------------------------------TGKEAQCK 216

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
            ++  +  V + +  +P G+E  LK AV T+GPV +AID+S Q F+ Y  GVYY+P C++
Sbjct: 217 KEKPSNVGVVKQFYRLPTGNEVLLKKAVGTVGPVYVAIDSSRQGFRMYKSGVYYDPYCST 276

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           T L HAVL+VGY + ENG  YWLVKNSW   +GD+GYIKMAR R
Sbjct: 277 TSLSHAVLIVGY-SKENGQYYWLVKNSWGEYFGDKGYIKMARKR 319


>gi|66816665|ref|XP_642342.1| hypothetical protein DDB_G0278401 [Dictyostelium discoideum AX4]
 gi|60470393|gb|EAL68373.1| hypothetical protein DDB_G0278401 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 89/172 (51%), Gaps = 46/172 (26%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+YI  N GIDTE SYP+E                                 D  CRYK
Sbjct: 187 AFEYIISNGGIDTEKSYPFEGT-------------------------------DGTCRYK 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              SGA    YV++  G E  L++AV  + PV+ +IDASH SF FY  G+Y+EP C+ T 
Sbjct: 216 SENSGATISSYVNVTFGSESSLESAV-NVNPVACSIDASHSSFLFYKSGIYFEPACSRTN 274

Query: 124 LDHAVLVVGYGTDE----------NGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           LDH VLVVGYGT+           N ++YW+ KNS    WG  GYI M+++R
Sbjct: 275 LDHGVLVVGYGTENSQSQDSSSEPNHSNYWIAKNS----WGINGYILMSKDR 322


>gi|46948152|gb|AAT07058.1| cathepsin L-like cysteine proteinase [Brugia malayi]
          Length = 391

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 87/165 (52%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y   N  I  ES YPY                                  +  C
Sbjct: 247 MPTAFEYAARN-AIAAESKYPY-------------------------------VETEQRC 274

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +++++ + A D G+  IP GDE  LK AVA  GPV + I AS +SF+FY +GVY E  C 
Sbjct: 275 KWQQSIAVAKDNGFNQIPPGDELALKHAVAKRGPVVVGISASKRSFRFYKDGVYSEGNCG 334

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
               DHAVLVVGYGTD +  DYW+VKNSW T WG +GY+ MARNR
Sbjct: 335 RP--DHAVLVVGYGTDRSYGDYWIVKNSWGTDWGKDGYVYMARNR 377


>gi|386364444|emb|CCH03783.1| Clan CA, family C1, cathepsin L-like cysteine peptidase, partial
           [Trichomonas gallinae]
          Length = 283

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D +C++  AK+G++ +G++++ EG E  L A VAT+GP +IAIDAS  SFQ YS G+
Sbjct: 168 TARDGSCKFNAAKAGSMIKGHINVEEGSEKDLAAKVATMGPAAIAIDASQWSFQLYSGGI 227

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y E  C++  LDH V  VGYGT E   +YW+V+NSW  +WG++GYI+M +++
Sbjct: 228 YDESRCSAYNLDHGVGCVGYGT-EGSKNYWIVRNSWGASWGEKGYIRMVKDK 278


>gi|170577734|ref|XP_001894118.1| Cathepsin L-like precursor [Brugia malayi]
 gi|158599434|gb|EDP37043.1| Cathepsin L-like precursor, putative [Brugia malayi]
          Length = 318

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 86/165 (52%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   FQY    +GI  ES YPY  +                                  C
Sbjct: 174 MVPVFQYA-SRYGIAMESRYPYVGVQQ-------------------------------RC 201

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+++  + A D G+ +IP GDE  LK AVA  GPV + I  S +SF+FY  GVY E  C 
Sbjct: 202 RWQQNIAVARDNGFNEIPPGDELALKHAVAKHGPVVVGISGSKRSFRFYKNGVYSERNCG 261

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             QLDHAVLVVGYGTD +  DYW+VKNSW   WG +GYI MARN+
Sbjct: 262 --QLDHAVLVVGYGTDRSYGDYWIVKNSWGAEWGKDGYIYMARNK 304


>gi|211910909|gb|ACJ13083.1| cathepsin L [Globodera pallida]
          Length = 293

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 74/133 (55%), Gaps = 30/133 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 191 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE KLK AVAT GP S+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 221 LFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECS 280

Query: 121 STQLDHAVLVVGY 133
              LDH VLVVGY
Sbjct: 281 PENLDHGVLVVGY 293


>gi|211910935|gb|ACJ13096.1| cathepsin L [Globodera mexicana]
          Length = 293

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 74/133 (55%), Gaps = 30/133 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 191 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE KLK AVAT GP S+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 221 LFKRNDVGATDTGFFDIAEGDEEKLKIAVATQGPASVAIDAGHRSFQLYTHGVYFEKECS 280

Query: 121 STQLDHAVLVVGY 133
              LDH VLVVGY
Sbjct: 281 PENLDHGVLVVGY 293


>gi|194246071|gb|ACF35527.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 93

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/78 (73%), Positives = 65/78 (83%), Gaps = 1/78 (1%)

Query: 88  AVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKN 147
           AVAT+GPVS+AIDASH SFQ YSEGVY E EC+S QLDH VLVVGYG  E+G  YWLVKN
Sbjct: 2   AVATVGPVSVAIDASHSSFQLYSEGVYDEAECSSEQLDHGVLVVGYGV-EDGKKYWLVKN 60

Query: 148 SWNTTWGDEGYIKMARNR 165
           SW  +WGD GYIKM+R++
Sbjct: 61  SWAESWGDNGYIKMSRDK 78


>gi|340370382|ref|XP_003383725.1| PREDICTED: silicatein-like [Amphimedon queenslandica]
          Length = 369

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           +F Y+ D +GI+TE SYPY            + LCY                      +K
Sbjct: 225 SFLYVIDKNGINTEQSYPY---------IESQYLCY----------------------FK 253

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
            +  G    G V I    E  L AAVA  GPV++ +D  H SFQFYS G++ EP C+ST 
Sbjct: 254 ESAIGGRATGMVRIASKSETDLMAAVAISGPVTVGVDHMHSSFQFYSSGIFDEPSCSSTS 313

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L HA+++VGYG+  NG DYWLVKNSW   WG  GYI M R +
Sbjct: 314 LTHAMVIVGYGS-YNGKDYWLVKNSWGANWGMSGYIMMVRGK 354


>gi|301769891|ref|XP_002920367.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281346353|gb|EFB21937.1| hypothetical protein PANDA_009084 [Ailuropoda melanoleuca]
          Length = 333

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+Y+KDN G+D+  SYPY          L R                     +++C
Sbjct: 183 MDNAFRYVKDNGGLDSAESYPY----------LGR---------------------NESC 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+  KS A    +  +    E  L   VAT+GPVS A+D+S  SFQFY +G+YY+P C 
Sbjct: 212 KYRPEKSAANLTTFWSV-SNKEDGLMTTVATVGPVSAAVDSSLHSFQFYKKGIYYDPNCR 270

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +L+HAVLVVGY   G +     YW++KNSW T WG +GY+ +A++R
Sbjct: 271 SNRLNHAVLVVGYGFEGEESENKKYWIIKNSWGTNWGMKGYMLLAKDR 318


>gi|410921048|ref|XP_003973995.1| PREDICTED: digestive cysteine proteinase 2-like [Takifugu rubripes]
          Length = 290

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           TS    C Y    + A  + Y  IP+GDE  L  AVATIGP+++AIDASH SF FYS G+
Sbjct: 165 TSDTQPCYYDSRLAVAHIKDYRFIPKGDEQALADAVATIGPITVAIDASHSSFLFYSSGI 224

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           Y E  CN   L HAVL+VGYG+ E G DYWL+KNSW  +WG+ GY+++ R+
Sbjct: 225 YEESNCNPNNLSHAVLLVGYGS-EGGQDYWLIKNSWGPSWGEGGYMRLIRD 274


>gi|37903264|gb|AAO64475.1| cathepsin K [Fundulus heteroclitus]
          Length = 191

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 88/165 (53%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  NHGI ++++YPY                                     C
Sbjct: 46  MANAFEYV-SNHGIVSDAAYPY-------------------------------VGKPGQC 73

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    + A   GY  +P+GDE+ LK  +A IGP+S AIDAS   F FY  GV+ +  C 
Sbjct: 74  KYNPTYTAANCTGYGFLPKGDEFALKLGLANIGPISAAIDASRPKFLFYRHGVFKDHTC- 132

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++H VL VGYGT E G DYWL+KNSW   +GDEGYIKMARNR
Sbjct: 133 SHNVNHGVLAVGYGT-EKGEDYWLIKNSWGEHFGDEGYIKMARNR 176


>gi|410990006|ref|XP_004001241.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 328

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 88/168 (52%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+++N G+DTE SYPY A                                D  C
Sbjct: 178 MSNAFQYVRNNRGLDTEESYPYVAR-------------------------------DGPC 206

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+   S A    +  IP  +E  L  A+  +G +S AIDAS  +F+FY  G+YY+P+C+
Sbjct: 207 KYRPEYSAANVTAFQTIPRREE-ALLVAMKNMGSISAAIDASLDTFRFYKGGIYYDPKCS 265

Query: 121 STQLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  L+H VLVVGY   G + +   YW VKNSW T WG  GYIKMAR R
Sbjct: 266 SEDLNHGVLVVGYGFQGKESDNQKYWFVKNSWGTDWGMGGYIKMARER 313


>gi|50355613|dbj|BAD29955.1| cysteine protease [Daucus carota]
          Length = 365

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 87/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDYAFDFIQQNHGLSTETNYPYSGT-------------------------------DGTC 220

Query: 61  RY-KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              K A   A   G+ D+P   E  L  AVA   P+S+AIDAS   FQFYS GV+   EC
Sbjct: 221 NANKEANHAATITGHEDVPANSESALLKAVAN-QPISVAIDASGSDFQFYSSGVF-TGEC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT  +G  YWLVKNSW T+WG+EGYI+M R     E  C
Sbjct: 279 G-TELDHGVTAVGYGTAADGTKYWLVKNSWGTSWGEEGYIQMQRGVAAAEGLC 330


>gi|19570821|dbj|BAB86343.1| silicatein [Halichondria okadai]
          Length = 189

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 92/165 (55%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  A+ YI  N G+ T+  YP+                      + R  Q         C
Sbjct: 52  MYDAYMYILANEGVATQDKYPF----------------------YGRQGQ---------C 80

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY ++  GA   G V I  G+E  L+AAVA+ GPV++A+D S+++F++YS GVY  P C+
Sbjct: 81  RYDKSLRGAKISGSVTISSGNEANLQAAVASTGPVAVAVDGSNKAFRYYSSGVYNLPGCS 140

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S  ++ A+L++GYGT   G DYWL+KNSW T WG  GYI M+RN+
Sbjct: 141 SYSINTALLIIGYGT-TGGADYWLLKNSWGTNWGMNGYIMMSRNK 184


>gi|148709375|gb|EDL41321.1| mCG12216, isoform CRA_a [Mus musculus]
          Length = 333

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +A +Y+ +N G+++E++YPYE                                 + +CRY
Sbjct: 185 RALKYVVENGGLESEATYPYE-------------------------------EKEGSCRY 213

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               S A   G+  +PE +E  L  AVATIGP+S+AIDA H+SF FY  G+Y+EP C+S+
Sbjct: 214 NPENSTASITGFDFVPE-NEDALMNAVATIGPISVAIDARHESFLFYKRGIYHEPNCSSS 272

Query: 123 QLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + HA+L+VGY   G +  G  YW+VKNS  T WG +GY+K+AR++
Sbjct: 273 VVTHAMLLVGYGFVGNESEGRKYWIVKNSMGTKWGSKGYMKIARDQ 318


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N GI  ES+YPY+ +                 +C K   +V   SG    
Sbjct: 195 MDYAFEYIIANKGICAESAYPYKGVGG---------------LCQKSCTKVVTISG---- 235

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y D+  GDE  L  AV T+GPVS+AI+A    FQFYS GV +   C 
Sbjct: 236 -------------YKDVASGDEASLLNAVGTVGPVSVAIEADQAGFQFYSSGV-FSGTCG 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VL VGYGT     DYW+VKNSW T+WG+ GYI+M RN+
Sbjct: 282 H-NLDHGVLAVGYGTT-GSQDYWIVKNSWGTSWGESGYIRMIRNK 324



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 177 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           LDH VL VGYGT     DYW+VKNSW T+WG+ GYI+M RN+ N CG+A   S+P V
Sbjct: 284 LDHGVLAVGYGTT-GSQDYWIVKNSWGTSWGESGYIRMIRNK-NQCGIAIQPSYPTV 338


>gi|148709376|gb|EDL41322.1| mCG12216, isoform CRA_b [Mus musculus]
          Length = 329

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +A +Y+ +N G+++E++YPYE                                 + +CRY
Sbjct: 181 RALKYVVENGGLESEATYPYE-------------------------------EKEGSCRY 209

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
               S A   G+  +PE +E  L  AVATIGP+S+AIDA H+SF FY  G+Y+EP C+S+
Sbjct: 210 NPENSTASITGFDFVPE-NEDALMNAVATIGPISVAIDARHESFLFYKRGIYHEPNCSSS 268

Query: 123 QLDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + HA+L+VGY   G +  G  YW+VKNS  T WG +GY+K+AR++
Sbjct: 269 VVTHAMLLVGYGFVGNESEGRKYWIVKNSMGTKWGSKGYMKIARDQ 314


>gi|58332124|ref|NP_001011214.1| cathepsin S, gene 2 precursor [Xenopus (Silurana) tropicalis]
 gi|56556518|gb|AAH87770.1| cathepsin S [Xenopus (Silurana) tropicalis]
          Length = 332

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 84/133 (63%), Gaps = 3/133 (2%)

Query: 33  LFRRLCYLLTICHKRSNQVTVTSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATI 92
           L     Y++       N    T  + +CR ++  +G       ++  GDE  L  AV T+
Sbjct: 188 LMSAFTYMMKHGVMEENAYRYTGQEADCR-RQVHTGLKVTAIHNVAAGDENVLMHAVGTV 246

Query: 93  GPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTT 152
           GPVS+ ID++ + F+ Y  GVYY+P C +T LDH+VLVVGYGTD NGNDYWLVKNSW   
Sbjct: 247 GPVSVNIDSNRKGFRLYKSGVYYDPYC-TTNLDHSVLVVGYGTD-NGNDYWLVKNSWGAG 304

Query: 153 WGDEGYIKMARNR 165
           +GD+GYIKMARNR
Sbjct: 305 YGDKGYIKMARNR 317


>gi|208972994|dbj|BAG74346.1| silicatein-G1 [Ephydatia fluviatilis]
          Length = 347

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 87/161 (54%), Gaps = 32/161 (19%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
           + YI DN GIDT SSYPY++   +                               C++  
Sbjct: 204 YLYIIDNGGIDTASSYPYKSKQYY-------------------------------CKFST 232

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
           +  GA   G+V I  G E  L +AVAT GPV++ +DA+  +FQFYS+G+     C+ST L
Sbjct: 233 SNVGAKATGFVLISSGSESDLMSAVATAGPVAVHVDANSYAFQFYSDGILDVVYCSSTNL 292

Query: 125 DHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            H VLVVGYGT +N  DYWL+KNSW   WG  GY  MARNR
Sbjct: 293 SHTVLVVGYGTYKN-KDYWLIKNSWGPNWGINGYAMMARNR 332


>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera]
          Length = 341

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 91/173 (52%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIEQNHGLTTEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AVA   P+++AIDA    FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVAH-QPIAVAIDAGGSEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 279 G-TELDHGVSAVGYGTSDDGMKYWLVKNSWGTGWGEEGYIRMQRDVTAKEGLC 330


>gi|13242029|gb|AAK16515.1|AF331037_1 cathepsin L-like cysteine proteinase [Litomosoides sigmodontis]
          Length = 400

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 86/161 (53%), Gaps = 33/161 (20%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
           FQY K +HGI TESSYPY                              VT    +CR+ +
Sbjct: 259 FQYAK-SHGIMTESSYPY------------------------------VTVARRDCRWDQ 287

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
            K+ A D G  +I  GDE  LK AVA  GPV + I   H+SF+FY  G+Y + +C+    
Sbjct: 288 RKAVATDNGAYEIQHGDELGLKHAVAKHGPVVVGISGHHRSFRFYRTGIYADEKCDVP-- 345

Query: 125 DHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            HAVLVVGYGT +   DYW++KNSW T WG  GY  MARN+
Sbjct: 346 SHAVLVVGYGTHKTRGDYWIIKNSWGTNWGKNGYGYMARNK 386


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 86/165 (52%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N GI  ES+YPY+ +                 +C K   +V   SG    
Sbjct: 195 MDYAFEYIIANKGICAESAYPYKGVGG---------------LCQKSCTKVVTISG---- 235

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y D+  GDE  L  AV T+GPVS+AI+A    FQFYS GV +   C 
Sbjct: 236 -------------YKDVASGDEASLLNAVGTVGPVSVAIEADQAGFQFYSSGV-FSGTCG 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDH VL VGYGT     DYW+VKNSW T+WG+ GYI+M RN+
Sbjct: 282 H-NLDHGVLAVGYGTT-GSQDYWIVKNSWGTSWGESGYIRMIRNK 324



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 177 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           LDH VL VGYGT     DYW+VKNSW T+WG+ GYI+M RN+ N CG+A   S+P V
Sbjct: 284 LDHGVLAVGYGTT-GSQDYWIVKNSWGTSWGESGYIRMIRNK-NQCGIAIQPSYPTV 338


>gi|161016200|gb|ABX56032.1| cytotoxic cysteine proteinase [Trichomonas vaginalis]
          Length = 305

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHG--IDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDD 58
           MD A+ Y+  + G    TE+ YPY                               T+ D 
Sbjct: 155 MDAAYDYVVKHQGGKFMTEADYPY-------------------------------TAQDG 183

Query: 59  NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
           +C++  AK  +   GYV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+Y E  
Sbjct: 184 SCKFSAAKGTSKVTGYVNVVEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESA 243

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+S  LDH V  VGYGT E   +YW+V+NSW T+WG++GYI+M +++
Sbjct: 244 CSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTSWGEKGYIRMIKDK 289


>gi|123457373|ref|XP_001316414.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121899120|gb|EAY04191.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 34/167 (20%)

Query: 1   MDQAFQYIKDNHG--IDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDD 58
           MD A+ Y+  + G    TE+ YPY                               T+ D 
Sbjct: 155 MDAAYDYVVKHQGGKFMTEADYPY-------------------------------TAQDG 183

Query: 59  NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
           +C++  AK  +   GYV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+Y E  
Sbjct: 184 SCKFSAAKGTSKVTGYVNVVEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGIYDESA 243

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+S  LDH V  VGYGT E   +YW+V+NSW T+WG++GYI+M +++
Sbjct: 244 CSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTSWGEKGYIRMIKDK 289


>gi|354504282|ref|XP_003514206.1| PREDICTED: cathepsin J-like [Cricetulus griseus]
 gi|344250851|gb|EGW06955.1| Cathepsin J [Cricetulus griseus]
          Length = 334

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 92/165 (55%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A+QY+  N G++ E +YPYEA                                D  CRY 
Sbjct: 186 AYQYVLHNGGLEAEETYPYEAK-------------------------------DGPCRYN 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A     V +P  ++Y L  AV+ IGPV+ AIDASH SF+FY  G+Y+EP C+S  
Sbjct: 215 PNNSRAYITEVVSLPAHEDYLL-VAVSMIGPVAAAIDASHDSFRFYRGGIYHEPNCSSYL 273

Query: 124 LDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
            +HAVLVVGYG + N   GN+YWL+KNSW   WG +GY+K+A+++
Sbjct: 274 TNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGMKGYMKIAKDQ 318


>gi|224809458|ref|NP_001019580.2| cathepsin S, b.1 precursor [Danio rerio]
 gi|63101450|gb|AAH95788.1| Cathepsin S, b.1 [Danio rerio]
 gi|77748418|gb|AAI07613.1| Cathepsin S, b.1 [Danio rerio]
          Length = 330

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN GI ++S+YPY  +         +R                      NC
Sbjct: 184 MSDAFQYVIDNGGIASDSAYPYRGVQQQCSYSSSQRAA--------------------NC 223

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y  + +GDE  LK AVA++GP+S+AIDA+   F  Y  GVY +P C 
Sbjct: 224 TK-----------YYFVRQGDENALKQAVASVGPISVAIDATRPQFVLYHSGVYNDPTC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++HAVLVVGYGT  +G DYWLVKNSW T +GD GYI+MARN+
Sbjct: 272 SKRVNHAVLVVGYGT-LSGQDYWLVKNSWGTRFGDGGYIRMARNK 315


>gi|146386358|gb|ABQ23967.1| cathepsin L [Oryctolagus cuniculus]
          Length = 246

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/134 (48%), Positives = 77/134 (57%), Gaps = 32/134 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY+KDN G+D+E SYPYE M                               D  C
Sbjct: 144 MDYAFQYVKDNSGLDSEESYPYEGM-------------------------------DGTC 172

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +YK   S A D G+VDIP G E  L  A+AT+GP+S AIDA H SFQFY  G+YY+P+C+
Sbjct: 173 KYKPECSVANDTGFVDIP-GHEKALLRALATVGPISAAIDAGHMSFQFYKSGIYYDPDCS 231

Query: 121 STQLDHAVLVVGYG 134
           S  LDH VLVVGYG
Sbjct: 232 SKDLDHGVLVVGYG 245


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 86/166 (51%), Gaps = 30/166 (18%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSG-DDN 59
           MD AF+Y+K++ GIDTE  YPY                            V+  +G    
Sbjct: 220 MDLAFEYVKEHKGIDTEVHYPY----------------------------VSGNTGYARQ 251

Query: 60  CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           C +    +     GYVDIPEG E  L+ AV   GP+S+ I+A   SF  Y  G+Y +  C
Sbjct: 252 CSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPSFMAYESGIYSDHRC 311

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           N   LDH VLVVGYG D NG  YWL+KNSW   WG+ GY+++ RN 
Sbjct: 312 NPHDLDHGVLVVGYGVD-NGVPYWLIKNSWGEDWGENGYVRILRNH 356


>gi|46948144|gb|AAT07054.1| cathepsin L-like cysteine proteinase [Brugia malayi]
          Length = 368

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 42/173 (24%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AF+Y+  N GIDTE SYPY+                                  + C
Sbjct: 210 MMEAFEYVVKNDGIDTEKSYPYQGY-------------------------------QNTC 238

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +  G        +PEGDE +L+AA+ATIGP+S+A+DA  +  +FY  G++   +C 
Sbjct: 239 RYSNSTRGTTAYAGKLLPEGDELQLQAAIATIGPISVAVDA--KLMKFYRRGIFSTSKC- 295

Query: 121 STQLDHAVLVVGYGTDE----NGN----DYWLVKNSWNTTWGDEGYIKMARNR 165
           +T++ HA+L VGYGT+E    NG     DYWL+KNSW+  WG  GY+K+ARN+
Sbjct: 296 TTRMGHALLAVGYGTEEVKLQNGTKKSVDYWLLKNSWSKRWGIGGYLKLARNQ 348


>gi|42794048|dbj|BAD11762.1| cahepsin L-like cysteine protease [Brugia malayi]
          Length = 371

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 42/173 (24%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AF+Y+  N GIDTE SYPY+                                  + C
Sbjct: 213 MMEAFEYVVKNDGIDTEKSYPYQGY-------------------------------QNTC 241

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +  G        +PEGDE +L+AA+ATIGP+S+A+DA  +  +FY  G++   +C 
Sbjct: 242 RYSNSTRGTTAYAGKLLPEGDELQLQAAIATIGPISVAVDA--KLMKFYRRGIFSTSKC- 298

Query: 121 STQLDHAVLVVGYGTDE----NGN----DYWLVKNSWNTTWGDEGYIKMARNR 165
           +T++ HA+L VGYGT+E    NG     DYWL+KNSW+  WG  GY+K+ARN+
Sbjct: 299 TTRMGHALLAVGYGTEEVKLQNGTKKSVDYWLLKNSWSKRWGIGGYLKLARNQ 351


>gi|56567186|gb|AAV98582.1| cathepsin L-like cysteine proteinase precursor [Trichomonas
           vaginalis]
          Length = 305

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D +C++  AK  +  + YV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+
Sbjct: 179 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGI 238

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y E  C+S  LDH V  VGYGT E   +YW+V+NSW TTWG++GYI+M +++
Sbjct: 239 YDESACSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTTWGEKGYIRMIKDK 289


>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase
           CEP1 [Vitis vinifera]
          Length = 341

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 90/173 (52%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++IK NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIKQNHGLTTEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AV    P+++AIDA    FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVVH-QPIAVAIDAGGFEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 279 G-TELDHGVAAVGYGTSDDGMKYWLVKNSWGTGWGEEGYIRMQRDVTAKEGLC 330


>gi|10946820|ref|NP_067420.1| cathepsin 6 precursor [Mus musculus]
 gi|9931384|gb|AAG02172.1|AF223401_1 cathepsin-6 [Mus musculus]
 gi|12838129|dbj|BAB24093.1| unnamed protein product [Mus musculus]
 gi|16445021|gb|AAK00510.1| cathepsin 6 precursor [Mus musculus]
 gi|68534635|gb|AAH99455.1| Cathepsin 6 [Mus musculus]
 gi|148709368|gb|EDL41314.1| cathepsin 6 [Mus musculus]
          Length = 334

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A++Y+ +N G++ E++YPYE                                 +  CRY 
Sbjct: 187 AYEYVLNNGGLEAEATYPYEGK-------------------------------EGPCRYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +PE ++  L  AVATIGP+S A+DAS   F FY  G+Y++P C++  
Sbjct: 216 PKNSKAEITGFVSLPESEDI-LMEAVATIGPISAAVDASFNRFSFYDGGIYHQPNCSNNT 274

Query: 124 LDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++HAVLVVGYGT+ N   GN YWL+KNSW   WG  GY+K+ R++
Sbjct: 275 VNHAVLVVGYGTEGNETDGNKYWLIKNSWGRRWGIGGYMKIIRDQ 319


>gi|392354126|ref|XP_573974.4| PREDICTED: cathepsin M-like [Rattus norvegicus]
          Length = 333

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A QY+K+N G+++E++YPYE                                 + +CRY 
Sbjct: 186 ALQYVKENGGLESEATYPYEGK-------------------------------EGSCRYH 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G   +P+ +E+ L  AVAT+GP+S+AIDA H+SF FY  G+Y+EP CNS+ 
Sbjct: 215 PDNSTASIAGIEFVPK-NEHALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCNSSV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H++L+VGY   G + +G  YW+VKNS    WG+ GY+K+A+++
Sbjct: 274 VTHSMLLVGYGFVGEESDGRKYWIVKNSMGNKWGNRGYMKIAKDQ 318


>gi|392354135|ref|XP_225128.6| PREDICTED: LOW QUALITY PROTEIN: cathepsin M [Rattus norvegicus]
          Length = 333

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 35/162 (21%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
           F+Y+ +N G++ ES+YPYE                                 + +CRY  
Sbjct: 187 FKYVWNNGGLEAESTYPYEGR-------------------------------EGHCRYLP 215

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
            +S A  +G+  I   +E  L  AVATIGP+S+ IDASH+SF FYS G+YYEP+C +  +
Sbjct: 216 ERSAARIKGFSIISSTEE-ALMNAVATIGPISVGIDASHESFTFYSGGIYYEPKCRNKTV 274

Query: 125 DHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           +HAVL+VGY   G + +G  YWL+KNS    WG  GY+K+AR
Sbjct: 275 NHAVLLVGYGYEGRESDGRKYWLIKNSHGVGWGMNGYMKLAR 316


>gi|154415085|ref|XP_001580568.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121914787|gb|EAY19582.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D  C++ +AK+ +    Y+++ EGDE  L A V+  GP S+AIDAS  SFQFYS+G+
Sbjct: 179 TALDGTCKFNKAKATSKIVSYINVVEGDEKDLAAKVSAYGPSSVAIDASQISFQFYSQGI 238

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y EP C+S  LDH V  VGYGT E   +YW+V+NSW   WGD+GYI+M +++
Sbjct: 239 YDEPYCSSYSLDHGVGCVGYGT-EGTKNYWIVRNSWGLGWGDQGYIRMIKDK 289


>gi|156384930|ref|XP_001633385.1| predicted protein [Nematostella vectensis]
 gi|156220454|gb|EDO41322.1| predicted protein [Nematostella vectensis]
          Length = 548

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 91/164 (55%), Gaps = 35/164 (21%)

Query: 3   QAFQYIKDNHGIDTESSY-PYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           +++QYI  + GI TE SY PY                                  D  C 
Sbjct: 400 RSYQYIMKSGGIATEESYGPY-------------------------------LGADGYCH 428

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
            K A+ GA   GYV+I EGD   LK A+A  GP+S++IDASH+S  FYS GVYYEP+C +
Sbjct: 429 KKDAEIGATITGYVNITEGDLSALKTAIAQKGPISVSIDASHKSLSFYSYGVYYEPKCGN 488

Query: 122 TQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
               LDH+VL VGYGT  +G  YW++KNSW+T WG  GY+ M++
Sbjct: 489 KNEDLDHSVLAVGYGT-MDGKPYWMIKNSWSTHWGMNGYVLMSQ 531


>gi|197205894|gb|ACH48000.1| silicatein A2 [Latrunculia oparinae]
          Length = 329

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+YI  N G+D   SYP++                                   +C
Sbjct: 182 MLYAFKYIIANDGLDVAKSYPFQGK-------------------------------QQSC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +G    G V I +G E  L  AVA +GPVS+AID S  +F+FY+ GVY    C+
Sbjct: 211 VYDDQDTGGKISGMVRIKQGSESDLIGAVANVGPVSVAIDGSSNAFRFYASGVYDSSRCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++L+HA++V GYGT   G DYWLVKNSW T WG  GYI MAR +
Sbjct: 271 SSKLNHAMVVTGYGT-YGGKDYWLVKNSWGTNWGQSGYIMMARGK 314


>gi|211910921|gb|ACJ13089.1| cathepsin L [Globodera rostochiensis]
          Length = 297

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 63/132 (47%), Positives = 74/132 (56%), Gaps = 30/132 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIKDN+G+D E  YPY+A                                   C
Sbjct: 196 MDNAFQYIKDNNGVDKELDYPYKAKTG------------------------------KKC 225

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +KR   GA D G+ DI EGDE +LK AVAT GPVS+AIDA H+SFQ Y+ GVY+E EC+
Sbjct: 226 LFKRNDVGATDTGFFDIAEGDEERLKIAVATQGPVSVAIDAGHRSFQLYTHGVYFEKECS 285

Query: 121 STQLDHAVLVVG 132
              LDH VLVVG
Sbjct: 286 PENLDHGVLVVG 297


>gi|392333757|ref|XP_003752991.1| PREDICTED: cathepsin M-like [Rattus norvegicus]
          Length = 333

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 35/163 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A QY+K+N G+++E++YPYE                                 + +CRY 
Sbjct: 186 ALQYVKENGGLESEATYPYEGK-------------------------------EGSCRYH 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G   +P+ +E+ L  AVAT+GP+S+AIDA H+SF FY  G+Y+EP CNS+ 
Sbjct: 215 PDNSTASIAGIEFVPK-NEHALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCNSSV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           + H++L+VGY   G + +G  YW+VKNS    WG+ GY+K+A+
Sbjct: 274 VTHSMLLVGYGFVGEESDGRKYWIVKNSMGNKWGNRGYMKIAK 316


>gi|28194643|gb|AAO33583.1|AF479265_1 cathepsin P [Meriones unguiculatus]
          Length = 334

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 89/166 (53%), Gaps = 35/166 (21%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           +AF Y+ +  G+  E SYPYE                                    CRY
Sbjct: 185 RAFMYVNETKGLQDEISYPYEGKQG-------------------------------TCRY 213

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
             + S A    +  +P+ + Y L  AVA+IGPV+ A+DAS  SF+FY  G+YYEP+C+  
Sbjct: 214 NSSNSRAYVTDFRLLPQNEIYLL-VAVASIGPVAAAVDASQDSFRFYRGGIYYEPKCSQY 272

Query: 123 QLDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
            ++HAVLVVGYG + N   G DYWL+KNSW   WG  GY+K+AR+R
Sbjct: 273 SVNHAVLVVGYGYEGNETDGKDYWLIKNSWGENWGMRGYMKIARDR 318


>gi|31981229|ref|NP_071721.2| cathepsin M precursor [Mus musculus]
 gi|12837968|dbj|BAB24022.1| unnamed protein product [Mus musculus]
 gi|12838184|dbj|BAB24116.1| unnamed protein product [Mus musculus]
 gi|16445013|gb|AAK00506.1| cathepsin M precursor [Mus musculus]
 gi|148669359|gb|EDL01306.1| mCG12220, isoform CRA_a [Mus musculus]
 gi|148921940|gb|AAI46421.1| Cathepsin M [synthetic construct]
 gi|151555373|gb|AAI48858.1| Cathepsin M [synthetic construct]
          Length = 333

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A  Y+ +N G+++E++YPYE                                 D +CRY 
Sbjct: 186 ALHYVMENGGLESEATYPYE-------------------------------EKDGSCRYS 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+  +P+ +E  L  AVA+IGP+S+AIDA H SF FY  G+YYEP C+S+ 
Sbjct: 215 PENSTANITGFEFVPK-NEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSSV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H++L+VGY   G + +G  YWLVKNS  T WG++GY+K++R++
Sbjct: 274 VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDK 318


>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera]
          Length = 341

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 91/173 (52%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIEQNHGLTTEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AVA   P+++AIDA    FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVAH-QPIAVAIDAGGFEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 279 G-TELDHGVSAVGYGTSDDGMKYWLVKNSWGTGWGEEGYIRMQRDVTEKEGLC 330


>gi|148669360|gb|EDL01307.1| mCG12220, isoform CRA_b [Mus musculus]
          Length = 335

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 94/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A  Y+ +N G+++E++YPYE                                 D +CRY 
Sbjct: 188 ALHYVMENGGLESEATYPYE-------------------------------EKDGSCRYS 216

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+  +P+ +E  L  AVA+IGP+S+AIDA H SF FY  G+YYEP C+S+ 
Sbjct: 217 PENSTANITGFEFVPK-NEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSSV 275

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H++L+VGY   G + +G  YWLVKNS  T WG++GY+K++R++
Sbjct: 276 VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDK 320


>gi|357474573|ref|XP_003607571.1| Cysteine proteinase EP-B [Medicago truncatula]
 gi|34329348|gb|AAQ63885.1| putative cysteine proteinase [Medicago truncatula]
 gi|355508626|gb|AES89768.1| Cysteine proteinase EP-B [Medicago truncatula]
          Length = 345

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++TE+ YPY+ +                               D  C
Sbjct: 196 MDDAFKFIIQNHGLNTEAQYPYQGV-------------------------------DGTC 224

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   AV   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 225 SANKASIHAVTITGYEDVPANNEQALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGSC 282

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYIKM R     E  C
Sbjct: 283 -GTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLC 334


>gi|123480189|ref|XP_001323249.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121906110|gb|EAY11026.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 315

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/112 (50%), Positives = 77/112 (68%), Gaps = 2/112 (1%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D  C++  +K  A   G   + +GDE  LK A AT GP++IAIDASH +FQ Y  G+
Sbjct: 191 TAKDGTCKFDVSKGYAKVTGDFQVTQGDENALKVASATYGPIAIAIDASHFTFQLYHSGI 250

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y    C+S+ LDHAV ++GYGTD+   DYWLV+NSW T+WG+ GYI+M RN+
Sbjct: 251 YDPWFCSSSNLDHAVGLIGYGTDK--KDYWLVRNSWGTSWGESGYIRMVRNK 300


>gi|242071345|ref|XP_002450949.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
 gi|241936792|gb|EES09937.1| hypothetical protein SORBIDRAFT_05g021550 [Sorghum bicolor]
          Length = 371

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 90/163 (55%), Gaps = 33/163 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYIK N GI TES+YPY A          +R C       +RS+ VT+       
Sbjct: 206 MDYAFQYIKRNGGITTESNYPYLAE---------QRSC---NKAKERSHDVTID------ 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P  +E  L+ AVA   PVSIAI+AS Q FQFYSEGV+    C 
Sbjct: 248 ------------GYEDVPANNEDALQKAVAN-QPVSIAIEASGQDFQFYSEGVF-TGSCG 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T+LDH V  VGYG   +G  YW+VKNSW   WG+ GYI+M R
Sbjct: 294 -TELDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQR 335



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR---NRENNCGVASSASFP 231
           T+LDH V  VGYG   +G  YW+VKNSW   WG+ GYI+M R   + +  CG+A   S+P
Sbjct: 294 TELDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGISDSQGLCGIAMEPSYP 353


>gi|242008549|ref|XP_002425065.1| predicted protein [Pediculus humanus corporis]
 gi|212508730|gb|EEB12327.1| predicted protein [Pediculus humanus corporis]
          Length = 549

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 75/109 (68%), Gaps = 3/109 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C   ++      +GYV +P GD   LK AVA  GPV +AIDASH++F FYS GVYY+
Sbjct: 433 DGYCHVNKSMDMVKIKGYVAVPSGDVDALKVAVAVHGPVGVAIDASHKTFSFYSNGVYYD 492

Query: 117 PECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           P C +T   LDHAVLVVG+G   NG DYWLVKNSW+  WG++GY+ M++
Sbjct: 493 PNCGNTPNDLDHAVLVVGFGK-LNGEDYWLVKNSWSNYWGNDGYVLMSQ 540


>gi|1272388|gb|AAB17051.1| cysteine protease, partial [Spirometra mansonoides]
          Length = 216

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D  CRY++    A   GY ++P+GDE  L+ AVA IGP+S+ IDA+   F  YS GV
Sbjct: 91  TAKDGFCRYQQDMVVANVTGYAELPQGDEASLQRAVAVIGPISVGIDANDPGFMSYSHGV 150

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +    C+   ++H VLV+GYGT EN   YWLVKNSW  +WG++GY+KMARN+
Sbjct: 151 FVSKTCSPDDINHGVLVIGYGT-ENDEPYWLVKNSWGRSWGEQGYVKMARNK 201


>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis]
 gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis]
          Length = 344

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 97/173 (56%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I +N+G+ TE++YPYE +                               D +C
Sbjct: 195 MDDAFEFIIENNGLTTEANYPYEGV-------------------------------DGSC 223

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             ++A + A    GY ++P  DE  L+ AVA   PVS+AIDA   +FQ YS G++   +C
Sbjct: 224 NTRKAANHAAKITGYENVPAYDEEALRKAVAN-QPVSVAIDAGESAFQHYSSGIF-TGDC 281

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V VVGYGT ++G  YWLVKNSW T+WG++GYI+M R+    E  C
Sbjct: 282 G-TELDHGVTVVGYGTSDDGTKYWLVKNSWGTSWGEDGYIRMERDIDAKEGLC 333



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V VVGYGT ++G  YWLVKNSW T+WG++GYI+M R+   +E  CG+A   S+P
Sbjct: 283 TELDHGVTVVGYGTSDDGTKYWLVKNSWGTSWGEDGYIRMERDIDAKEGLCGIAMEPSYP 342


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++TE+ YPY+ +                               D  C
Sbjct: 196 MDDAFKFIIQNHGLNTEAQYPYQGV-------------------------------DGTC 224

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   AV   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 225 SANKASIHAVTITGYEDVPANNEQALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGSC 282

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYIKM R     E  C
Sbjct: 283 -GTELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLC 334


>gi|359385048|emb|CBY80149.1| silicatein yellow variant [Tethya aurantium]
          Length = 332

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 88/162 (54%), Gaps = 32/162 (19%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF+Y+  N G+D+E+SYPY    S                               +C YK
Sbjct: 188 AFKYVIANDGVDSETSYPYGGKQS-------------------------------SCTYK 216

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G + I  G E  L+AAVA  GPV++AID S  +F+FY  GVY    C+S+ 
Sbjct: 217 TQNSVASMSGSIQIKYGSETDLEAAVANNGPVAVAIDGSSNAFRFYFSGVYDSSRCSSSY 276

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           L+HA+++ GYG   +  +YWL KNSW T WG+EGY+KMARN+
Sbjct: 277 LNHAMVITGYGISGD-QEYWLAKNSWGTNWGEEGYVKMARNK 317


>gi|5230687|gb|AAD40962.1| cathepsinS related protein [Oryzias latipes]
          Length = 110

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 2/93 (2%)

Query: 73  GYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVG 132
           GY  +P+GDE+ LK  VATIGP+S+AIDAS   F FY  GVY +  C S  ++H VLVVG
Sbjct: 5   GYNFLPKGDEFALKVGVATIGPISVAIDASRPKFLFYRHGVYKDHSC-SHNVNHGVLVVG 63

Query: 133 YGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           YGT ENG DYWLVKNSW   +GD GYIKMARNR
Sbjct: 64  YGT-ENGEDYWLVKNSWGERYGDGGYIKMARNR 95


>gi|46948150|gb|AAT07057.1| cathepsin L-like cysteine proteinase [Brugia malayi]
          Length = 393

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 85/165 (51%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY    +GI  ES YPY                                  +  C
Sbjct: 249 MPTAFQYA-SRYGIAMESRYPY-------------------------------VGTEQRC 276

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+++  +   D G+ +I  GDE  LK AVA  GPV + I  S +SF+FY +GVY E  C 
Sbjct: 277 RWQQNIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCG 336

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
               DHAVLVVGYGTD +  DYW+VKNSW T WG +GY+ MARNR
Sbjct: 337 RP--DHAVLVVGYGTDRSYGDYWIVKNSWGTDWGKDGYVYMARNR 379


>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis]
 gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis]
          Length = 342

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 93/173 (53%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++IK N G+ TE++YPY+                                 D  C
Sbjct: 193 MDDAFEFIKQNGGLTTEANYPYQGT-------------------------------DGTC 221

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A + A    GY D+P   E  L  AVA+  PVS+AIDAS  +FQFYS GV+   +C
Sbjct: 222 NTNKAGNDAAKITGYEDVPANSEDALLKAVASQ-PVSVAIDASGSAFQFYSGGVF-TGDC 279

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW T+WG++GYI+M R+    E  C
Sbjct: 280 G-TELDHGVTAVGYGTSDDGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLC 331



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYGT ++G  YWLVKNSW T+WG++GYI+M R+   +E  CG+A   S+P
Sbjct: 281 TELDHGVTAVGYGTSDDGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQPSYP 340


>gi|218478062|dbj|BAH03397.1| cathepsin L-like cysteine peptidase [Taenia asiatica]
          Length = 338

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+++ H I+ ES+YPY A                                D  C
Sbjct: 192 MSYAFKYLEE-HSIEPESAYPYRAT-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          DIPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 220 RYNESLGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL +GYG  E G  YWLVKNSW T WG +GYI MA++
Sbjct: 280 SKFLNHGVLAIGYGKQE-GKPYWLVKNSWGTRWGMKGYIMMAKD 322


>gi|195382039|ref|XP_002049740.1| GJ20585 [Drosophila virilis]
 gi|194144537|gb|EDW60933.1| GJ20585 [Drosophila virilis]
          Length = 333

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 86/163 (52%), Gaps = 33/163 (20%)

Query: 3   QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRY 62
           QA  Y++DN GID ESSYPY++          R+L                     +CR+
Sbjct: 189 QALMYVRDNGGIDIESSYPYDS----------RQL---------------------SCRF 217

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNST 122
            R   GA     V + + DE  L  A A  GP+S+ I A  Q+F  Y  GVY +  CN  
Sbjct: 218 DRHNVGASVSAIVRLKQDDESNLAVATAIKGPISVLIHAG-QTFMQYRSGVYKDNSCNKY 276

Query: 123 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +HAVLVVGYG D    DYWLVKNSW + WG+ GYI+MARNR
Sbjct: 277 -FNHAVLVVGYGHDSREGDYWLVKNSWGSKWGESGYIRMARNR 318


>gi|63101996|gb|AAH95694.1| Cathepsin S, b.1 [Danio rerio]
          Length = 330

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY+ DN GI ++S+YPY  +         +R                      NC
Sbjct: 184 MSDAFQYVIDNGGIASDSAYPYRGVQQQCSYSSSQRAA--------------------NC 223

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y  + +GDE  LK AVA++GP+S+AIDA+   F  Y  GVY +P C 
Sbjct: 224 TK-----------YYFVRQGDENALKQAVASVGPISVAIDATRPQFVLYHSGVYNDPTC- 271

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S +++HAVLVVGYGT  +G D+WLVKNSW T +GD GYI+MARN+
Sbjct: 272 SKRVNHAVLVVGYGT-LSGQDHWLVKNSWGTRFGDGGYIRMARNK 315


>gi|37911662|gb|AAR05023.1| cathepsin L-like protein [Tenebrio molitor]
          Length = 336

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 84/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF Y+  N GID+E +YPYE                                 D NC
Sbjct: 190 MNDAFTYVAQNGGIDSEGAYPYEM-------------------------------ADGNC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y   +  A   GYV +   DE  L   VAT GPV++A DA    F  YS GVYY P C 
Sbjct: 219 HYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDAD-DPFGSYSGGVYYNPTCE 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +  HAVL+VGYG +ENG DYWLVKNSW   WG +GY K+ARN
Sbjct: 278 TNKFTHAVLIVGYG-NENGQDYWLVKNSWGDGWGLDGYFKIARN 320


>gi|123438675|ref|XP_001310117.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121891873|gb|EAX97187.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 78/112 (69%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D +C++  AK  +  + YV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+
Sbjct: 179 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGI 238

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y E  C+S  LDH V  VGYGT E   +YW+V+NSW T+WG++GYI+M +++
Sbjct: 239 YDESACSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTSWGEKGYIRMIKDK 289


>gi|374414520|pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
 gi|374414521|pdb|3QJ3|B Chain B, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
          Length = 331

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 84/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF Y+  N GID+E +YPYE                                 D NC
Sbjct: 185 MNDAFTYVAQNGGIDSEGAYPYEM-------------------------------ADGNC 213

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y   +  A   GYV +   DE  L   VAT GPV++A DA    F  YS GVYY P C 
Sbjct: 214 HYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDAD-DPFGSYSGGVYYNPTCE 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           + +  HAVL+VGYG +ENG DYWLVKNSW   WG +GY K+ARN
Sbjct: 273 TNKFTHAVLIVGYG-NENGQDYWLVKNSWGDGWGLDGYFKIARN 315


>gi|410968392|ref|XP_003990691.1| PREDICTED: cathepsin S, partial [Felis catus]
          Length = 310

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 80/147 (54%), Gaps = 33/147 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M +AFQYI DN+GID+E+SYPY+AM                               D  C
Sbjct: 197 MTEAFQYIIDNNGIDSEASYPYKAM-------------------------------DGKC 225

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y      A    Y ++P G E  LK  VA  GPVS+AIDASH SF  Y  GVYYEP C 
Sbjct: 226 QYDSKNRAATCSKYTELPFGSEEDLKETVANKGPVSVAIDASHSSFFLYRSGVYYEPACT 285

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKN 147
            T ++H VLVVGYG + NG DYWLVKN
Sbjct: 286 QT-VNHGVLVVGYG-NLNGKDYWLVKN 310


>gi|189571697|ref|NP_001121688.1| cathepsin 8 precursor [Rattus norvegicus]
          Length = 333

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 88/163 (53%), Gaps = 35/163 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+  N G++ ES+YPYE                                 +  CRY 
Sbjct: 186 ALKYVWSNGGLEAESTYPYEGK-------------------------------EGPCRYL 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             +S A   G+  +   +E  L  AVATIGP+S+ IDASH SF+FY  G+YYEP C+S +
Sbjct: 215 PRRSAARVTGFSTVARSEE-ALMHAVATIGPISVGIDASHVSFRFYRRGIYYEPRCSSNR 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           ++H+VLVVGY   G + +G  YWL+KNS    WG  GY+K+AR
Sbjct: 274 INHSVLVVGYGYEGRESDGRKYWLIKNSHGVGWGMNGYMKLAR 316


>gi|22653680|sp|Q9JL96.1|CATM_MOUSE RecName: Full=Cathepsin M; Flags: Precursor
 gi|7715970|gb|AAF68224.1|AF202528_1 cathepsin M [Mus musculus]
          Length = 333

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A  Y+ +N G+++E++YPYE                                 D +CRY 
Sbjct: 186 ALHYVMENGGLESEATYPYE-------------------------------EKDGSCRYS 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+  +P+ +E  L  AVA+IGP+S+AIDA H SF FY  G+YYEP C+S  
Sbjct: 215 PENSTANITGFEFVPK-NEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H++L+VGY   G + +G  YWLVKNS  T WG++GY+K++R++
Sbjct: 274 VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDK 318


>gi|68399197|ref|XP_695425.1| PREDICTED: cathepsin L [Danio rerio]
          Length = 349

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 39  YLLTICHKRSNQVTVTSGDDN-CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSI 97
           Y++    + S+    TS D   C Y++  + A    Y  +P G+E  L  AVAT+GPVS+
Sbjct: 208 YVINNALESSDTYPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQALADAVATVGPVSV 267

Query: 98  AIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
           AIDA + SF FYS G+Y E  CN   L+HAVLVVGYG++E G DYW++KNSW T WG+ G
Sbjct: 268 AIDADNPSFLFYSSGIYKESNCNPNNLNHAVLVVGYGSEE-GTDYWIIKNSWGTGWGEGG 326

Query: 158 YIKMARN 164
           Y++M RN
Sbjct: 327 YMRMIRN 333


>gi|449268624|gb|EMC79477.1| Cathepsin S, partial [Columba livia]
          Length = 127

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 2/106 (1%)

Query: 60  CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           CRY  +   A    YV++P GDE  L+ AVAT+GPV++AIDA+  +F  Y  GVY +P C
Sbjct: 9   CRYNASNRAATCSKYVELPYGDEAALRDAVATVGPVAVAIDATQPTFFLYKSGVYDDPRC 68

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            + +++HAV+V+GYGT  NG DYWLVKNSW   +GD GYI+MARN 
Sbjct: 69  -TDEVNHAVVVIGYGT-LNGKDYWLVKNSWGVHFGDAGYIRMARNH 112


>gi|94733563|emb|CAK11015.1| novel protein similar to vertebrate cathepsin L (CTSL) [Danio
           rerio]
          Length = 334

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 39  YLLTICHKRSNQVTVTSGDDN-CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSI 97
           Y++    + S+    TS D   C Y++  + A    Y  +P G+E  L  AVAT+GPVS+
Sbjct: 193 YVINNALESSDTYPYTSVDTQPCFYEKNLAMAGISDYRFVPAGNEQALADAVATVGPVSV 252

Query: 98  AIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEG 157
           AIDA + SF FYS G+Y E  CN   L+HAVLVVGYG++E G DYW++KNSW T WG+ G
Sbjct: 253 AIDADNPSFLFYSSGIYKESNCNPNNLNHAVLVVGYGSEE-GTDYWIIKNSWGTGWGEGG 311

Query: 158 YIKMARN 164
           Y++M RN
Sbjct: 312 YMRMIRN 318


>gi|6650391|gb|AAF21819.1|AF098670_1 silicatein beta [Tethya aurantium]
          Length = 334

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 85/164 (51%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   + YI  N GIDT   YP++   +                               +C
Sbjct: 187 MYNTYLYILSNDGIDTSDGYPFKGKQT-------------------------------SC 215

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y R+  G    G + I  G E  L+AAVA+ GPV++A+D S ++F+FY  G+Y  P C+
Sbjct: 216 TYDRSCRGTSISGSIAITSGSESDLQAAVASAGPVAVAVDGSSRAFRFYDYGLYNLPGCS 275

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S QL HA+L+ GYG+  NGN YWLVKNSW T WG  GYI M RN
Sbjct: 276 SYQLSHALLITGYGS-FNGNQYWLVKNSWGTNWGMSGYIMMTRN 318


>gi|125533982|gb|EAY80530.1| hypothetical protein OsI_35710 [Oryza sativa Indica Group]
          Length = 378

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 88/163 (53%), Gaps = 33/163 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+IK N GI TES+YPY A                      R N+   +S D   
Sbjct: 211 MDYAFQFIKRNGGITTESNYPYRAEQG-------------------RCNKAKASSHDVT- 250

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                    +D GY D+P  DE  L+ AVA   PV++A++AS Q FQFYSEGV+   EC 
Sbjct: 251 ---------ID-GYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGVF-TGECG 298

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH V  VGYG   +G  YW+VKNSW   WG+ GYI+M R
Sbjct: 299 -TDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQR 340


>gi|187960088|ref|NP_062414.3| cathepsin 8 precursor [Mus musculus]
 gi|8917581|gb|AAF81277.1|AF250840_1 EPCS68 [Mus musculus]
 gi|16445019|gb|AAK00509.1| cathepsin 2 precursor [Mus musculus]
 gi|26340210|dbj|BAC33768.1| unnamed protein product [Mus musculus]
 gi|148709369|gb|EDL41315.1| cathepsin 8 [Mus musculus]
          Length = 333

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+  N G++ ES+YPY+                                 D +CRY 
Sbjct: 186 ALKYVWKNRGLEAESTYPYKGT-------------------------------DGHCRYH 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             +S A    +  +    E  L  AVATIGP+S+ IDA H+SF+ Y EG+YYEP+C+S  
Sbjct: 215 PERSAARITSFSFV-SNSEKDLMRAVATIGPISVGIDARHKSFRLYREGIYYEPKCSSNI 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++H+VLVVGY   G + +GN YWL+KNS    WG  GY+K+AR R
Sbjct: 274 INHSVLVVGYGYEGKESDGNKYWLIKNSHGEQWGMNGYMKLARGR 318


>gi|37780047|gb|AAP32196.1| cysteine protease 8 [Trifolium repens]
          Length = 343

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 85/173 (49%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+ TE+ YPYE +                               D  C
Sbjct: 194 MDDAFKFIIQNHGLSTEAQYPYEGV-------------------------------DGTC 222

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   AV   GY D+P   E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 223 NANKASVQAVTITGYEDVPANSEQALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI M R     E  C
Sbjct: 281 G-TELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGVEAAEGLC 332


>gi|123492185|ref|XP_001326005.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121908913|gb|EAY13782.1| Clan CA, family C1, cathepsin L-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 305

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D +C++  AK  +  + YV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+
Sbjct: 179 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGI 238

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y E  C+S  LDH V  VGYGT E   +YW+V+NSW T WG++GYI+M +++
Sbjct: 239 YDESACSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTAWGEKGYIRMIKDK 289


>gi|115484973|ref|NP_001067630.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|530335|emb|CAA56844.1| cysteine protease [Oryza sativa Japonica Group]
 gi|5761322|dbj|BAA83472.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|62732672|gb|AAX94791.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732673|gb|AAX94792.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|62732674|gb|AAX94793.1| cysteine proteinase (EC 3.4.22.-) - rice [Oryza sativa Japonica
           Group]
 gi|77549615|gb|ABA92412.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549616|gb|ABA92413.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|77549617|gb|ABA92414.1| Thiol protease SEN102 precursor, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113644852|dbj|BAF27993.1| Os11g0255300 [Oryza sativa Japonica Group]
 gi|125576789|gb|EAZ18011.1| hypothetical protein OsJ_33558 [Oryza sativa Japonica Group]
 gi|215701098|dbj|BAG92522.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 378

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 88/163 (53%), Gaps = 33/163 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+IK N GI TES+YPY A                      R N+   +S D   
Sbjct: 211 MDYAFQFIKRNGGITTESNYPYRAEQG-------------------RCNKAKASSHDVT- 250

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                    +D GY D+P  DE  L+ AVA   PV++A++AS Q FQFYSEGV+   EC 
Sbjct: 251 ---------ID-GYEDVPANDESALQKAVANQ-PVAVAVEASGQDFQFYSEGVF-TGECG 298

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH V  VGYG   +G  YW+VKNSW   WG+ GYI+M R
Sbjct: 299 -TDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQR 340


>gi|3928766|dbj|BAA34704.1| cathepsin L-like tick cysteine proteinase B [Haemaphysalis
           longicornis]
          Length = 332

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 70/104 (67%), Gaps = 2/104 (1%)

Query: 63  KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSF-QFYSEGVYYEPECNS 121
           +R   G    G +  P       +    T+GPVS+AIDA   S  QFYSEG+Y EPEC+S
Sbjct: 215 RRPPWGPPTAGTLTSPRETRRSCRRLWPTVGPVSVAIDAQPTSHSQFYSEGIYDEPECSS 274

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            QLDH VLVVGYGT ++G DYWLVKNSW TTWGDEGYI M RN+
Sbjct: 275 EQLDHGVLVVGYGT-KDGKDYWLVKNSWGTTWGDEGYIYMTRNQ 317


>gi|40060510|gb|AAR37419.1| papain-like cysteine proteinase [Trichomonas vaginalis]
          Length = 254

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/112 (50%), Positives = 78/112 (69%), Gaps = 2/112 (1%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D  C++  +K  A   G   + +GDE  L++A AT GP++IAIDASH +FQ Y  G+
Sbjct: 130 TAKDGTCKFDVSKGYAKVTGDFQVTQGDENALRSASATYGPIAIAIDASHFTFQLYHSGI 189

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y    C+S+ LDHAV ++GYGTD+   DYWLV+NSW T+WG+ GYI+M RN+
Sbjct: 190 YDPWFCSSSNLDHAVGLIGYGTDK--KDYWLVRNSWGTSWGESGYIRMVRNK 239


>gi|349605613|gb|AEQ00796.1| Cathepsin S-like protein, partial [Equus caballus]
          Length = 121

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 2/105 (1%)

Query: 60  CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           CRY      A    Y ++P G E  LK AVA  GPVS+AIDASH SF  Y  GVYY+P C
Sbjct: 3   CRYDSKNRAATCSKYTELPFGSEDDLKEAVANKGPVSVAIDASHPSFFLYKSGVYYDPSC 62

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            +  ++H VLVVGYG + NG DYWLVKNSW   +GD+GYI+MARN
Sbjct: 63  -TQNVNHGVLVVGYG-NLNGKDYWLVKNSWGINFGDKGYIRMARN 105


>gi|45946482|gb|AAH68241.1| Cathepsin 8 [Mus musculus]
          Length = 333

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 89/165 (53%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A +Y+  N G++ ES+YPY+                                 D +CRY 
Sbjct: 186 ALKYVWKNRGLEAESTYPYKGT-------------------------------DGHCRYH 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
             +S A    +  +    E  L  AVATIGP+S+ IDA H+SF+ Y EG+YYEP+C+S  
Sbjct: 215 PERSAARITSFSFV-SNSEKDLMRAVATIGPISVGIDARHKSFRLYREGIYYEPKCSSNI 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++H+VLVVGY   G + +GN YWL+KNS    WG  GY+K+AR R
Sbjct: 274 INHSVLVVGYGYEGKESDGNKYWLIKNSHGEQWGMNGYMKLARGR 318


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 92/167 (55%), Gaps = 36/167 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD+A +YI +  GI +E  YPYE +                               DDNC
Sbjct: 178 MDKALEYI-EKGGIMSEKDYPYEGV-------------------------------DDNC 205

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  +K  A    +  I + DE  LK AVA  GP+S+AIDAS  +FQ Y  G+  + EC+
Sbjct: 206 RFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAIDAS-ATFQLYVSGILDDTECS 264

Query: 121 ST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           +    L+H VLVVGYGT ENG DYW++KNSW   WG +GYI+M+RN+
Sbjct: 265 NEFDSLNHGVLVVGYGT-ENGKDYWIIKNSWGVNWGMDGYIRMSRNK 310


>gi|281206749|gb|EFA80934.1| counting factor associated protein [Polysphondylium pallidum PN500]
          Length = 530

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 106/230 (46%), Gaps = 82/230 (35%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AFQYI +  GI  ES+YPY     +               C   S+Q++      N + K
Sbjct: 383 AFQYIMNFGGIAYESTYPYLMQNGY---------------CKDSSSQLS------NIKVK 421

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
                     YV++    E  L+ AVAT+GPV+IAIDAS   F+FYS GVYY   C    
Sbjct: 422 S---------YVNVTSFSEPALQNAVATVGPVAIAIDASAPDFRFYSSGVYYSSVC---- 468

Query: 124 LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLV 183
                        +NG D                                   LDH VL 
Sbjct: 469 -------------KNGLD----------------------------------DLDHEVLA 481

Query: 184 VGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
           VGYGT  NG DYW+VKNSW+T +G EGYI M+RNR NNCGVAS  ++P+V
Sbjct: 482 VGYGT-LNGADYWIVKNSWSTHYGAEGYILMSRNRGNNCGVASQPTYPVV 530


>gi|374530932|gb|AEP83812.2| cysteine endopeptidase EP8 [Secale cereale x Triticum durum]
          Length = 364

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 92/172 (53%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I  N GI TES+YPY+                   +  ++++ VT+       
Sbjct: 199 MDYAFQFIHKN-GITTESNYPYQGEQG------------SCDLAKEKAHAVTID------ 239

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P  DE  L+ AVA   PVS+AIDAS   FQFYSEGV +  EC 
Sbjct: 240 ------------GYEDVPANDESALQKAVAGQ-PVSVAIDASGNDFQFYSEGV-FTGEC- 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           ST LDH V  VGYGT  +G  YW+VKNSW   WG++GYI+M R     E +C
Sbjct: 285 STDLDHGVAAVGYGTTRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQAEGQC 336


>gi|218478060|dbj|BAH03396.1| cathepsin L-like cysteine peptidase [Taenia saginata]
          Length = 338

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 86/164 (52%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+++ H I+ ES+YPY A                                D  C
Sbjct: 192 MSYAFKYLEE-HSIEPESAYPYRAT-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          DIPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 220 RYNESLGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL +GYG  ++G  YWLVKNSW T WG +GYI MA++
Sbjct: 280 SKFLNHGVLAIGYG-KQDGKPYWLVKNSWGTRWGMKGYIMMAKD 322


>gi|414870137|tpg|DAA48694.1| TPA: vignain [Zea mays]
          Length = 484

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 88/172 (51%), Gaps = 35/172 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  + G+  E +YPY A  +                               +C
Sbjct: 316 MDYAFQYIAKHGGVAAEDAYPYRARQA-------------------------------SC 344

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +   A    +D GY D+P  DE  LK AVA   PVS+AI+AS   FQFYSEGV+    C 
Sbjct: 345 KKSPAPVVTID-GYEDVPANDESALKKAVAH-QPVSVAIEASGSHFQFYSEGVF-SGRCG 401

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+    E  C
Sbjct: 402 -TELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHC 452


>gi|454890|emb|CAA54438.1| cysteine proteinase, putative [Trichomonas vaginalis]
          Length = 292

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 77/112 (68%), Gaps = 1/112 (0%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T+ D +C++  AK  +  + YV++ EGDE  L   V+T+GP +IAIDAS  SFQ YS G+
Sbjct: 166 TARDGSCKFNAAKGTSQIKSYVNVAEGDEKDLATKVSTLGPAAIAIDASAWSFQLYSSGI 225

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y E  C+S  LDH V  VGYGT E   +YW+V+NSW T WG++GYI+M +++
Sbjct: 226 YDESACSSYNLDHGVGCVGYGT-EGSKNYWIVRNSWGTAWGEKGYIRMIKDK 276


>gi|10336513|dbj|BAB13759.1| cysteine proteinase [Astragalus sinicus]
          Length = 343

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 89/173 (51%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+DTE+ YPY+ +                               D  C
Sbjct: 194 MDDAFKFIIQNHGLDTEAKYPYQGV-------------------------------DGTC 222

Query: 61  RYKRAK-SGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
               A  + A    Y D+P  +E  L+ AVA   P+S+AIDAS   FQFY+ GV +   C
Sbjct: 223 NANEASINAATITSYEDVPTNNEQALQKAVAN-QPISVAIDASGSDFQFYTSGV-FTGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG  ++G  YWLVKNSW T+WG+EGYI+M R     E  C
Sbjct: 281 -GTELDHGVTAVGYGVSDDGTKYWLVKNSWGTSWGEEGYIRMQRGVDAVEGLC 332


>gi|91085671|ref|XP_971698.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011034|gb|EFA07482.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 86/165 (52%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF YI    GID+ESSYPY+ +                               D++C
Sbjct: 190 MTDAFTYIAQTGGIDSESSYPYKGV-------------------------------DESC 218

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +   K  A  +GY  +   DE  L   V++ GPVS+A DA    F  YS GVYY P C 
Sbjct: 219 HFMSDKVAAKLKGYAYLTGPDENMLADMVSSKGPVSVAFDA-EGDFGSYSGGVYYNPNCA 277

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + +  HAVL+VGYG +ENG DYWLVKNSW   WG+ GY K+ARN+
Sbjct: 278 TNKFTHAVLIVGYG-NENGQDYWLVKNSWGDGWGEHGYFKIARNK 321


>gi|37780043|gb|AAP32194.1| cysteine protease 1 [Trifolium repens]
          Length = 292

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 86/173 (49%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+ TE  YPYE +                               D  C
Sbjct: 143 MDDAFKFIIQNHGLSTEVQYPYEGV-------------------------------DGTC 171

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   AV   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY+ GV+    C
Sbjct: 172 NANKASIHAVTITGYEDVPANNELALQKAVAN-QPISVAIDASGSDFQFYNSGVF-TGSC 229

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW   WG+EGYI+M R     E  C
Sbjct: 230 -GTELDHGVTAVGYGVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIAAAEGLC 281



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 107 QFYSEGVYYEPECNSTQLD-HAVLVVGYGTDENGNDYWLVKNSWN----TTWGDEGYIKM 161
           Q+  EGV  +  CN+ +   HAV + GY      N+  L K   N          G    
Sbjct: 161 QYPYEGV--DGTCNANKASIHAVTITGYEDVPANNELALQKAVANQPISVAIDASGSDFQ 218

Query: 162 ARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---R 218
             N   +   C  T+LDH V  VGYG   +G  YWLVKNSW   WG+EGYI+M R     
Sbjct: 219 FYNSGVFTGSC-GTELDHGVTAVGYGVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIAAA 277

Query: 219 ENNCGVASSASFP 231
           E  CG+A  AS+P
Sbjct: 278 EGLCGIAMQASYP 290


>gi|350425511|ref|XP_003494144.1| PREDICTED: counting factor associated protein D-like [Bombus
           impatiens]
          Length = 549

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 3/111 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C    A   A   GYV++  GD   LK A+A  GP+S+AIDASH++F FYS GVYY+
Sbjct: 426 DGYCHINNATVTAKITGYVNVTSGDANALKVAIAKHGPISVAIDASHKTFSFYSHGVYYD 485

Query: 117 PECNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             C +T+  LDHAVL VGYG+  NG DYWLVKNSW+  WG++GYI M++ +
Sbjct: 486 ESCGNTEESLDHAVLAVGYGS-LNGKDYWLVKNSWSNYWGNDGYILMSQEK 535


>gi|27960487|gb|AAO27847.1|AF456463_1 cathepsin M [Mus musculus]
 gi|16323039|gb|AAL15416.1| cathepsin M [Mus musculus]
          Length = 333

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A  Y+ +N G+++E++YPYE                                 + +CRY 
Sbjct: 186 ALHYVMENGGLESEATYPYE-------------------------------EKEGSCRYS 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+  +P+ +E  L  AVA+IGP+S+AIDA H SF FY  G+YYEP C+S+ 
Sbjct: 215 PENSTANITGFEFVPK-NEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSSV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + H++L+VGY   G + +G  YWLVKNS  T WG++GY+K++R++
Sbjct: 274 VTHSMLLVGYGFAGRESDGRKYWLVKNSMGTQWGNKGYMKISRDK 318


>gi|195637152|gb|ACG38044.1| vignain precursor [Zea mays]
          Length = 377

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  + G+  E +YPY A  +                               +C
Sbjct: 209 MDYAFQYIAKHGGVAAEDAYPYRARQA-------------------------------SC 237

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +   A    +D GY D+P  DE  LK AVA   PVS+AI+AS   FQFYSEGV+    C 
Sbjct: 238 KKSPAPVVTID-GYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVF-SGRCG 294

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECN 173
            T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+    E  C 
Sbjct: 295 -TELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCG 346



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+   +E +CG+A  AS+P
Sbjct: 295 TELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCGIAMEASYP 354

Query: 232 L 232
           +
Sbjct: 355 V 355


>gi|118627554|emb|CAL64936.1| putative cysteine protease 8 [Trifolium pratense]
          Length = 344

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 85/173 (49%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+ TE+ YPYE +                               D  C
Sbjct: 195 MDDAFKFIIQNHGLSTEAQYPYEGV-------------------------------DGTC 223

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   AV   GY D+P   E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 224 NANKASVQAVTITGYEDVPANSEQALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGAC 281

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI M R     E  C
Sbjct: 282 G-TELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGIEAAEGIC 333


>gi|301609086|ref|XP_002934107.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 332

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 3/112 (2%)

Query: 54  TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
           T  + +CR +R  +G       ++ +GDE  LK AV T+GPVS+A+DA    F+ Y  GV
Sbjct: 209 TGQEADCR-RRVHTGLKVNAIYNVTDGDENVLKNAVGTVGPVSVAVDARQNGFRTYKSGV 267

Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           Y++P C +  + HAVLVVGYG  E GNDYWLVKNSW   WGD+GY+KMARNR
Sbjct: 268 YFDPYC-TLHVTHAVLVVGYG-REYGNDYWLVKNSWGVDWGDQGYVKMARNR 317


>gi|242020372|ref|XP_002430629.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515801|gb|EEB17891.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 346

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 33/161 (20%)

Query: 5   FQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKR 64
           ++Y+ DN G++ E+ YPYE                                 +  CR+  
Sbjct: 202 YEYVMDNEGVNNETDYPYEVR-------------------------------EGKCRFSS 230

Query: 65  AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQL 124
            K  A  + YV +   DE  LKAAVAT GPVS+++DAS  +F+ Y  GVY + +C+S +L
Sbjct: 231 KKFTAKIKDYVSVSYFDEDALKAAVAT-GPVSVSMDASSPAFKKYKGGVYTDDKCSSMKL 289

Query: 125 DHAVLVVGYGTD-ENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           +HAV+ VGYGTD +   DYWLV+NSW T WG+ GY K+ARN
Sbjct: 290 NHAVVAVGYGTDPDTKQDYWLVRNSWGTAWGERGYFKIARN 330


>gi|42734286|emb|CAD67990.1| silicatein beta [Suberites domuncula]
          Length = 383

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 27/165 (16%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +++A  Y+ +N G+DT   YP                          S      S   +C
Sbjct: 231 VNRALLYVIENDGVDTWKGYP--------------------------SGGDPYRSKQYSC 264

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+R   GA  RG V +  GDE  L  AVA  GPVS+ +DA+  SFQFYS+GV   P C+
Sbjct: 265 KYERQYRGASARGIVSLASGDENTLLTAVANSGPVSVYVDATSTSFQFYSDGVLNVPYCS 324

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ L HA++V+GYG   +G DYWLVKNSW   WG  GY K+ARN+
Sbjct: 325 SSTLSHALVVIGYG-KYSGQDYWLVKNSWGPNWGVRGYGKLARNK 368


>gi|355344587|gb|AER60490.1| cysteine proteases [Gossypium hirsutum]
          Length = 371

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I DN GIDTE  YPY   + F                   +NQ   T      
Sbjct: 203 MDYAFQFIMDNGGIDTEKDYPY---LGF-------------------NNQCDPTK----- 235

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D GY D+P  +E  LK AVA   PVSIAI+A  ++FQ Y  GV+   EC 
Sbjct: 236 --KNAKVVSID-GYEDVPN-NENALKKAVAH-QPVSIAIEAGGRAFQLYESGVF-NGEC- 288

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              LDH V+ VGYGTD+NG DYW+V+NSW + WG+ GYI+M RN
Sbjct: 289 GLALDHGVVAVGYGTDDNGQDYWIVRNSWGSNWGENGYIRMERN 332



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 4/68 (5%)

Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGV 224
           +  EC    LDH V+ VGYGTD+NG DYW+V+NSW + WG+ GYI+M RN   N   CG+
Sbjct: 284 FNGEC-GLALDHGVVAVGYGTDDNGQDYWIVRNSWGSNWGENGYIRMERNINANTGKCGI 342

Query: 225 ASSASFPL 232
           A  AS+P+
Sbjct: 343 AMEASYPV 350


>gi|64966531|emb|CAH04635.1| silicatein beta [Suberites domuncula]
 gi|64966546|emb|CAH05007.1| silicatein-B protein SILICAbge_SUBDO [Suberites domuncula]
 gi|85677144|emb|CAI46304.1| silicatein beta [Suberites domuncula]
          Length = 383

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 27/165 (16%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           +++A  Y+ +N G+DT   YP                         RS Q +       C
Sbjct: 231 VNRALLYVIENDGVDTWKGYPSGGD-------------------PYRSKQYS-------C 264

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y+R   GA  RG V +  GDE  L  AVA  GPVS+ +DA+  SFQFYS+GV   P C+
Sbjct: 265 KYERQYRGASARGIVSLASGDENTLLTAVANSGPVSVYVDATSTSFQFYSDGVLNVPYCS 324

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S+ L HA++V+GYG   +G DYWLVKNSW   WG  GY K+ARN+
Sbjct: 325 SSTLSHALVVIGYG-KYSGQDYWLVKNSWGPNWGVRGYGKLARNK 368


>gi|323451555|gb|EGB07432.1| hypothetical protein AURANDRAFT_2413 [Aureococcus anophagefferens]
          Length = 263

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/163 (42%), Positives = 88/163 (53%), Gaps = 35/163 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ N GI +E+ Y Y A                   C    ++V   S     
Sbjct: 122 MDNAFKWIQSNGGICSEADYAYTAAKG---------------TCKTTCDKVATLS----- 161

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       G+ D+P GDE  LK AVA IGPVSIAI+A    FQ YS G+     C 
Sbjct: 162 ------------GHTDVPSGDEDALKTAVA-IGPVSIAIEADKSVFQSYSSGILDSSACG 208

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH VLVVGYGTD+ G++YW VKNSW TTWG+ GY+++AR
Sbjct: 209 -TNLDHGVLVVGYGTDD-GSEYWKVKNSWGTTWGESGYVRIAR 249



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 45/57 (78%), Gaps = 2/57 (3%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFP 231
           T LDH VLVVGYGTD+ G++YW VKNSW TTWG+ GY+++AR   N CG+AS  S+P
Sbjct: 209 TNLDHGVLVVGYGTDD-GSEYWKVKNSWGTTWGESGYVRIARGS-NICGIASEPSYP 263


>gi|357477459|ref|XP_003609015.1| Cysteine proteinase [Medicago truncatula]
 gi|355510070|gb|AES91212.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 87/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+ TE++YPY+ +                               D  C
Sbjct: 196 MDDAFKFIIQNHGLSTEAAYPYQGV-------------------------------DGTC 224

Query: 61  RYKRAK-SGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A    A   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 225 NANKASIHAATITGYEDVPANNEQALQKAVAN-QPISVAIDASGSDFQFYKSGVF-SGSC 282

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI+M R     E  C
Sbjct: 283 G-TELDHGVTAVGYGVGNDGTKYWLVKNSWGTDWGEEGYIRMQRGVDAAEGLC 334


>gi|223946391|gb|ACN27279.1| unknown [Zea mays]
          Length = 279

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  + G+  E +YPY A  +                               +C
Sbjct: 111 MDYAFQYIAKHGGVAAEDAYPYRARQA-------------------------------SC 139

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +   A    +D GY D+P  DE  LK AVA   PVS+AI+AS   FQFYSEGV+    C 
Sbjct: 140 KKSPAPVVTID-GYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVF-SGRCG 196

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECN 173
            T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+    E  C 
Sbjct: 197 -TELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCG 248



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+   +E +CG+A  AS+P
Sbjct: 197 TELDHGVAAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCGIAMEASYP 256

Query: 232 L 232
           +
Sbjct: 257 V 257


>gi|226507950|ref|NP_001151278.1| LOC100284911 precursor [Zea mays]
 gi|195645488|gb|ACG42212.1| vignain precursor [Zea mays]
          Length = 376

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 88/172 (51%), Gaps = 35/172 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  + G+  E +YPY A  +                               +C
Sbjct: 208 MDYAFQYIAKHGGVAAEDAYPYRARQA-------------------------------SC 236

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +   A    +D GY D+P  DE  LK AVA   PVS+AI+AS   FQFYSEGV+    C 
Sbjct: 237 KKSPAPVVTID-GYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVF-SGRCG 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+    E  C
Sbjct: 294 -TELDHGVTAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHC 344



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYG   +G  YWLVKNSW   WG++GYI+MAR+   +E +CG+A  AS+P
Sbjct: 294 TELDHGVTAVGYGVTADGTKYWLVKNSWGPEWGEKGYIRMARDVAAKEGHCGIAMEASYP 353

Query: 232 L 232
           +
Sbjct: 354 V 354


>gi|535454|gb|AAA50755.1| cysteine proteinase [Alnus glutinosa]
          Length = 340

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 90/173 (52%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I+ NHG+ +E++YPY+ +                               D  C
Sbjct: 191 MDNAFTFIQHNHGLASEANYPYKGV-------------------------------DGTC 219

Query: 61  RY-KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              K+A   A   G+ D+P   E  L  AVA   PVS+AIDA    FQFYS+GV+    C
Sbjct: 220 NTNKQAIHAAEINGFEDVPANSEEALLNAVAH-QPVSVAIDAGGSGFQFYSKGVFIGA-C 277

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             TQLDH V  VGYGT ++G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 278 G-TQLDHGVTAVGYGTSDDGTKYWLVKNSWGTQWGEEGYIRMQRDVDAKEGLC 329



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           TQLDH V  VGYGT ++G  YWLVKNSW T WG+EGYI+M R+   +E  CG+A  AS+P
Sbjct: 279 TQLDHGVTAVGYGTSDDGTKYWLVKNSWGTQWGEEGYIRMQRDVDAKEGLCGIAMKASYP 338


>gi|41323856|gb|AAS00027.1| cathepsin L-like cysteine proteinase [Taenia solium]
          Length = 339

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 86/164 (52%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+++ H I+ ES+YPY A                                D  C
Sbjct: 193 MSYAFKYLEE-HFIEPESAYPYRAT-------------------------------DGPC 220

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          DIPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 221 RYNESLGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCS 280

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL +GYG  ++G  YWLVKNSW T WG +GYI MA++
Sbjct: 281 SKFLNHGVLAIGYG-KQDGKPYWLVKNSWGTRWGMKGYIMMAKD 323


>gi|356517350|ref|XP_003527350.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
 gi|356577765|ref|XP_003556993.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Glycine
           max]
          Length = 343

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 88/178 (49%), Gaps = 35/178 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHGI+TE+SYPY+ +                               D  C
Sbjct: 194 MDGAFKFIIQNHGINTEASYPYKGV-------------------------------DGKC 222

Query: 61  RYKR-AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             K  A   A   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  G++    C
Sbjct: 223 NIKEEAVHAATITGYEDVPINNEKALQKAVAN-QPVSVAIDASGADFQFYKSGIF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQL 177
             T+LDH V  VGYG +  G  YWLVKNSW T WG+EGYI M R     E  C    +
Sbjct: 281 -GTELDHGVTAVGYGENNEGTKYWLVKNSWGTEWGEEGYIMMQRGVKAVEGICGIAMM 337


>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens]
          Length = 343

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N+GI TE+ YPY+ +                               D  C
Sbjct: 194 MDDAFKFIIQNNGISTEAGYPYQGV-------------------------------DGTC 222

Query: 61  RYKRAK-SGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           +   A  S A   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 223 KANEASTSAATITGYEDVPANNENALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 281 -GTELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEEGYIRMQRSIDAAEGLC 332


>gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis]
 gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis]
          Length = 422

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD A+Q++ +N+GIDTE  YPY+A                   C+K   +  V + D   
Sbjct: 187 MDYAYQFVIENNGIDTEEDYPYQAREK---------------TCNKEKLKRHVVTID--- 228

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P+ +E +L  AVA   PVS+ I  S ++FQ YS+G++  P   
Sbjct: 229 ------------GYTDVPQNNEKELLKAVAA-QPVSVGICGSERAFQLYSKGIFTGP--C 273

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           ST LDHAVL+VGYG+ ENG DYW+VKNSW T WG  GY+ M RN
Sbjct: 274 STSLDHAVLIVGYGS-ENGVDYWIVKNSWGTHWGINGYMYMLRN 316



 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 12/126 (9%)

Query: 116 EPECNSTQLD-HAVLVVGYGTDENGNDYWLVKNSWNT-----TWGDEGYIKMARNRVYYE 169
           E  CN  +L  H V + GY      N+  L+K            G E   ++    ++  
Sbjct: 212 EKTCNKEKLKRHVVTIDGYTDVPQNNEKELLKAVAAQPVSVGICGSERAFQLYSKGIFTG 271

Query: 170 PECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVAS 226
           P   ST LDHAVL+VGYG+ ENG DYW+VKNSW T WG  GY+ M RN  N+   CG+  
Sbjct: 272 P--CSTSLDHAVLIVGYGS-ENGVDYWIVKNSWGTHWGINGYMYMLRNSGNSQGLCGINM 328

Query: 227 SASFPL 232
            ASFP+
Sbjct: 329 LASFPV 334


>gi|356577813|ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 87/164 (53%), Gaps = 35/164 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+++  NHG++TE++YPY+ +                               D  C
Sbjct: 741 MDDAFKFVIQNHGLNTEANYPYKGV-------------------------------DGKC 769

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
               A +  V   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 770 NANEAANDVVTITGYEDVPANNEKALQKAVAN-QPVSVAIDASGSDFQFYKSGVF-TGSC 827

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R
Sbjct: 828 -GTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQR 870


>gi|225446585|ref|XP_002280215.1| PREDICTED: vignain [Vitis vinifera]
          Length = 341

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 90/173 (52%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I+ NHG+ TE++YPY                                  D  C
Sbjct: 192 MDDAFKFIEQNHGLATEANYPYAGT-------------------------------DGTC 220

Query: 61  -RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            R K A   A   GY D+P  +E  L+ AVA   P+++AIDA    FQFYS GV+   +C
Sbjct: 221 NRKKAAHPAAKINGYEDVPANNEKALQKAVAH-QPIAVAIDAGGFEFQFYSSGVF-TGQC 278

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYGT ++G  YWLVKNSW T WG+ GYI+M R+    E  C
Sbjct: 279 G-TELDHGVAAVGYGTSDDGMKYWLVKNSWGTGWGEVGYIRMQRDVTAKEGLC 330


>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens]
          Length = 343

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 88/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N+GI TE+ YPY+ +                               D  C
Sbjct: 194 MDDAFKFIIQNNGISTEAGYPYQGV-------------------------------DGTC 222

Query: 61  RYKRAK-SGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           +   A  S A   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV+    C
Sbjct: 223 KANEASTSAATITGYEDVPANNENALQKAVAN-QPISVAIDASGSDFQFYKSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI+M R+    E  C
Sbjct: 281 -GTELDHGVTAVGYGISNDGTKYWLVKNSWGTDWGEEGYIRMQRSIDAAEGLC 332


>gi|27573938|pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L.
           From The 96- Residue Proregion To Optimized Tripeptides
 gi|27573940|pdb|1MHW|B Chain B, Design Of Non-covalent Inhibitors Of Human Cathepsin L.
           From The 96- Residue Proregion To Optimized Tripeptides
          Length = 175

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 32/134 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG 134
           S  +DH VLVVGYG
Sbjct: 158 SEDMDHGVLVVGYG 171


>gi|6448469|dbj|BAA86911.1| homologue of Sarcophaga 26,29kDa proteinase [Periplaneta americana]
          Length = 552

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 3/108 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C  +     A   GYV++  GD   LK A+A  GP+S+AIDASH++F FYS G+YY+
Sbjct: 429 DGYCHVENVTLTAKITGYVNVTSGDIDALKVALAKHGPISVAIDASHKTFSFYSNGIYYD 488

Query: 117 PECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
           PEC +   QLDHAVL+VGYG   NGN YWLVKNSW+  WG++GYI M+
Sbjct: 489 PECGNKLDQLDHAVLLVGYGI-INGNPYWLVKNSWSNYWGNDGYILMS 535


>gi|70912393|ref|NP_783171.2| cathepsin R precursor [Rattus norvegicus]
 gi|66911479|gb|AAH97484.1| Cathepsin R [Rattus norvegicus]
 gi|149039731|gb|EDL93847.1| cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A++Y+ +N G++ E++YPY+                                 +  CRY 
Sbjct: 187 AYEYVLNNGGLEAEATYPYKGK-------------------------------EGVCRYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +PE ++  L  AVATIGP+S+A+DAS  SF FY +G+Y EP C++  
Sbjct: 216 PKHSKAEITGFVSLPESEDI-LMEAVATIGPISVAVDASFNSFGFYKKGLYDEPNCSNNT 274

Query: 124 LDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++H+VLVVGYG + N   GN YWL+KNSW   WG  GY+K+ +++
Sbjct: 275 VNHSVLVVGYGFEGNETDGNSYWLIKNSWGRKWGLRGYMKIPKDQ 319


>gi|356577811|ref|XP_003557016.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 87/164 (53%), Gaps = 35/164 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+++  NHG++TE++YPY+ +                               D  C
Sbjct: 194 MDDAFKFVIQNHGLNTEANYPYKGV-------------------------------DGKC 222

Query: 61  RYKRAKS-GAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
               A +  A   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 223 NVNEAANDAATITGYEDVPANNEKALQKAVAN-QPVSVAIDASGSDFQFYKSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R
Sbjct: 281 -GTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQR 323


>gi|6980666|pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii
           Fragment In Complex With Cathepsin L
 gi|6980668|pdb|1ICF|C Chain C, Crystal Structure Of Mhc Class Ii Associated P41 Ii
           Fragment In Complex With Cathepsin L
          Length = 175

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 32/134 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQY++DN G+D+E SYPYEA                                +++C
Sbjct: 70  MDYAFQYVQDNGGLDSEESYPYEAT-------------------------------EESC 98

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +Y    S A D G+VDIP+  E  L  AVAT+GP+S+AIDA H+SF FY EG+Y+EP+C+
Sbjct: 99  KYNPKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCS 157

Query: 121 STQLDHAVLVVGYG 134
           S  +DH VLVVGYG
Sbjct: 158 SEDMDHGVLVVGYG 171


>gi|91085677|ref|XP_971867.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011032|gb|EFA07480.1| cathepsin L precursor [Tribolium castaneum]
          Length = 329

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 87/165 (52%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  A+ YI  N GI+ + +YPY+A                             ++G   C
Sbjct: 183 MTDAYMYIARNGGINLDRNYPYKA-----------------------------SAGP--C 211

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++ +K     RGY  +   +E  LK  V T GPVS+AIDAS + F  Y  GVYY P C 
Sbjct: 212 RFQASKPKVTIRGYAYLTGPNEEMLKHMVVTQGPVSVAIDASGR-FASYGGGVYYNPSCA 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +  HAV++VGYG  ENG DYWLVKNSW   WG  GYIKMARNR
Sbjct: 271 RNKFTHAVVIVGYGR-ENGQDYWLVKNSWGRDWGLGGYIKMARNR 314


>gi|242081867|ref|XP_002445702.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
 gi|241942052|gb|EES15197.1| hypothetical protein SORBIDRAFT_07g024430 [Sorghum bicolor]
          Length = 372

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 35/172 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI  + G+  E +YPY+A  +                               +C
Sbjct: 204 MDYAFQYIAKHGGVAAEDAYPYKARQA-------------------------------SC 232

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           +   A +  +D GY D+P  DE  LK AVA   PVS+AI+AS   FQFYSEGV+    C 
Sbjct: 233 KKSPAPAVTID-GYEDVPANDESALKKAVAHQ-PVSVAIEASGSHFQFYSEGVF-AGRCG 289

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            T+LDH V  VGYG   +G  YW+VKNSW   WG++GYI+MAR+    E  C
Sbjct: 290 -TELDHGVTAVGYGVAADGTKYWVVKNSWGPEWGEKGYIRMARDVAAKEGHC 340



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYG   +G  YW+VKNSW   WG++GYI+MAR+   +E +CG+A  AS+P
Sbjct: 290 TELDHGVTAVGYGVAADGTKYWVVKNSWGPEWGEKGYIRMARDVAAKEGHCGIAMEASYP 349

Query: 232 L 232
           +
Sbjct: 350 V 350


>gi|27960477|gb|AAO27843.1|AF456459_1 cathepsin R [Rattus norvegicus]
          Length = 334

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A++Y+ +N G++ E++YPY+                                 +  CRY 
Sbjct: 187 AYEYVLNNGGLEAEATYPYKGK-------------------------------EGVCRYN 215

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +PE ++  L  AVATIGP+S+A+DAS  SF FY +G+Y EP C++  
Sbjct: 216 PKHSKAEITGFVSLPESEDI-LMEAVATIGPISVAVDASFNSFGFYKKGLYDEPNCSNNT 274

Query: 124 LDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++H+VLVVGYG + N   GN YWL+KNSW   WG  GY+K+ +++
Sbjct: 275 VNHSVLVVGYGFEGNETDGNSYWLIKNSWGRKWGLRGYMKIPKDQ 319


>gi|399108346|gb|AFP20583.1| cysteine endopeptidase [Jatropha curcas]
          Length = 167

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 89/173 (51%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++IK   G+ TE++YPYEA                                D  C
Sbjct: 1   MDYAFEFIKQKGGLTTEANYPYEAE-------------------------------DGTC 29

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             K+  S AV   GY  +PE DE  L  AVA   PVS+AIDA    FQFYSEGV+    C
Sbjct: 30  DSKKENSPAVSIDGYEKVPENDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFT-GSC 87

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V +VGYGT  +G  YW+VKNSW   WG++GYI+M R     E  C
Sbjct: 88  G-TELDHGVAIVGYGTTLDGTKYWIVKNSWGEEWGEKGYIRMKRGISEKEGLC 139



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V +VGYGT  +G  YW+VKNSW   WG++GYI+M R    +E  CG+A  AS+P
Sbjct: 89  TELDHGVAIVGYGTTLDGTKYWIVKNSWGEEWGEKGYIRMKRGISEKEGLCGIAMEASYP 148

Query: 232 L 232
           +
Sbjct: 149 I 149


>gi|356545063|ref|XP_003540965.1| PREDICTED: thiol protease SEN102-like [Glycine max]
          Length = 361

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 87/164 (53%), Gaps = 35/164 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+++  NHG++TE++YPY+ +                               D  C
Sbjct: 212 MDDAFKFVIQNHGLNTEANYPYKGV-------------------------------DGKC 240

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
               A +  V   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 241 NANEAANDVVTITGYEDVPANNEKALQKAVAN-QPVSVAIDASGSDFQFYKSGVF-TGSC 298

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R
Sbjct: 299 -GTELDHGVTAVGYGVSNDGTEYWLVKNSWGTEWGEEGYIRMQR 341


>gi|219687002|dbj|BAH08632.1| daikon cysteine protease RD21 [Raphanus sativus]
          Length = 289

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 93/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A                      R +Q          
Sbjct: 71  MDYAFEFIIKNGGIDTEEDYPYKAA-------------------DGRCDQ---------- 101

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK   +D  Y D+PE +E  LK A+A   P+S+AI+A  ++FQ YS GV+ +  C 
Sbjct: 102 NRKNAKVVTID-AYEDVPENNEAALKKALANQ-PISVAIEAGGRAFQLYSSGVF-DGTC- 157

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+LDH V+ VGYGT ENG DYW+V+NSW  +WG+ GYIKMARN
Sbjct: 158 GTELDHGVVAVGYGT-ENGKDYWIVRNSWGGSWGESGYIKMARN 200



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V+ VGYGT ENG DYW+V+NSW  +WG+ GYIKMARN       CG+A  AS+P
Sbjct: 159 TELDHGVVAVGYGT-ENGKDYWIVRNSWGGSWGESGYIKMARNIAEATGKCGIAMEASYP 217

Query: 232 L 232
           +
Sbjct: 218 I 218


>gi|357471211|ref|XP_003605890.1| Cysteine proteinase [Medicago truncatula]
 gi|355506945|gb|AES88087.1| Cysteine proteinase [Medicago truncatula]
          Length = 343

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 87/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++TE++YPY+ +                               D  C
Sbjct: 194 MDDAFKFIIQNHGLNTEANYPYQGV-------------------------------DGTC 222

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +    AV   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV +   C
Sbjct: 223 NANKGSINAVTITGYEDVPTNNEQALQKAVAN-QPISVAIDASGSDFQFYKSGV-FTGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI M R     E  C
Sbjct: 281 -GTELDHGVTAVGYGVSNDGTKYWLVKNSWGTEWGEEGYIMMQRGVDAAEGLC 332


>gi|195160555|ref|XP_002021141.1| GL24978 [Drosophila persimilis]
 gi|194118254|gb|EDW40297.1| GL24978 [Drosophila persimilis]
          Length = 338

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 87/163 (53%), Gaps = 34/163 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF Y +DN GI T+ SYP      F+P                           + CRY 
Sbjct: 192 AFNYTRDN-GIATKESYP------FVPL-------------------------SEECRYD 219

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS-- 121
           ++ S    RGYV +   DE +L   V  IGPV+++ID  HQSFQ Y  GV  +  C S  
Sbjct: 220 KSTSAGRVRGYVTLSNADERELAEVVYNIGPVAVSIDHLHQSFQNYKRGVLKDENCRSDR 279

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             L HAVLVVG+GTD    DYWL+KNS+ T+WG +GY+K+ARN
Sbjct: 280 ASLRHAVLVVGFGTDAEWGDYWLIKNSYGTSWGIDGYLKLARN 322


>gi|170581088|ref|XP_001895531.1| Cathepsin L-like precursor [Brugia malayi]
 gi|158597480|gb|EDP35622.1| Cathepsin L-like precursor, putative [Brugia malayi]
          Length = 321

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 85/165 (51%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY    +GI  ES YPY                                  +  C
Sbjct: 177 MPTAFQYAS-RYGIAMESRYPY-------------------------------VGTEQRC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+++  +   D G+ +I  GDE  LK AVA  GPV + I  S +SF+FY +GVY E  C 
Sbjct: 205 RWQQNIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCG 264

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
               DHAVLVVGYGT ++  DYW+VKNSW T WG +GY+ MARNR
Sbjct: 265 RP--DHAVLVVGYGTHQSYGDYWIVKNSWGTDWGKDGYVYMARNR 307


>gi|115441717|ref|NP_001045138.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|5761329|dbj|BAA83473.1| cysteine endopeptidase [Oryza sativa]
 gi|20804884|dbj|BAB92565.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|56785107|dbj|BAD82745.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113534669|dbj|BAF07052.1| Os01g0907600 [Oryza sativa Japonica Group]
 gi|119395242|gb|ABL74582.1| cysteine endopeptidase [Oryza sativa Japonica Group]
 gi|125528777|gb|EAY76891.1| hypothetical protein OsI_04850 [Oryza sativa Indica Group]
 gi|125573036|gb|EAZ14551.1| hypothetical protein OsJ_04473 [Oryza sativa Japonica Group]
          Length = 371

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 91/167 (54%), Gaps = 32/167 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK + GI TES+YPY A                   C             D  
Sbjct: 203 MENAFEYIKHSGGITTESAYPYRAANG---------------TC-------------DAV 234

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R +RA    +D G+ ++P   E  L  AVA   PVS+AIDA  QSFQFYS+GV+   +C 
Sbjct: 235 RARRAPLVVID-GHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVF-AGDCG 291

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVY 167
            T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+  Y
Sbjct: 292 -TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGY 337



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
           T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+   +   CG+A  AS+P
Sbjct: 292 TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEASYP 351

Query: 232 L 232
           +
Sbjct: 352 V 352


>gi|4100157|gb|AAD10337.1| cysteine proteinase precursor [Hordeum vulgare]
          Length = 365

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 93/172 (54%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I+ N GI TES+YPY+                          Q +     +N 
Sbjct: 200 MDYAFQFIQKN-GITTESNYPYQG------------------------EQGSCDQAKEN- 233

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
               A++  +D GY D+P  DE  L+ AVA   PVS+AIDAS Q FQFYSEGV+   EC 
Sbjct: 234 ----AQAVTID-GYEDVPANDESALQKAVAGQ-PVSVAIDASGQDFQFYSEGVF-TGEC- 285

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           ST LDH V  VGYG   +G  YW+VKNSW   WG++GYI+M R     E  C
Sbjct: 286 STDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQTEGLC 337


>gi|86279349|gb|ABC88770.1| putative cathepsin L-like proteinase [Tenebrio molitor]
          Length = 416

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 86/164 (52%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +E +YPYEA                                 D C
Sbjct: 271 MDSAFSYIPD-YGIMSEFAYPYEAQ-------------------------------GDYC 298

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++      GY D+P G E  L  AV   GPV++AIDA  +  QFYS G++Y+  CN
Sbjct: 299 RFDSSQFVTTLSGYYDLPSGGENSLADAVGQAGPVAVAIDAPDE-LQFYSGGLFYDQTCN 357

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            + L+H V VVGYG+D NG DYW++KNSW   WG+ GY +  RN
Sbjct: 358 QSDLNHGVFVVGYGSD-NGQDYWILKNSWGFGWGESGYWRQVRN 400



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 89/180 (49%), Gaps = 50/180 (27%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF YI D +GI +ES+YPYEA                                 D C
Sbjct: 103 MDSAFSYIHD-YGIMSESAYPYEAQ-------------------------------GDYC 130

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R+  ++S     GY D+P G E  L  AV   GPV++AIDA+ +  QFYS G++Y+  CN
Sbjct: 131 RFDSSQSVTTLSGYYDLPSGGENSLADAVGQAGPVAVAIDATDE-LQFYSGGLFYDQTCN 189

Query: 121 STQLDHAVLVVGYGTDENGNDYW------LVKN--------SWNTTWGDEGYIKMARNRV 166
            + L+H VLVVGYG+D   N +W       VK+        S++TT   EG + + R R+
Sbjct: 190 QSDLNHGVLVVGYGSD---NGHWGSNAVSEVKDQGQCGSCWSFSTTGAIEGQLALQRGRL 246


>gi|2224808|emb|CAB09697.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
 gi|326502180|dbj|BAK06781.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 93/172 (54%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I+ N GI TES+YPY+                          Q +     +N 
Sbjct: 200 MDYAFQFIQKN-GITTESNYPYQG------------------------EQGSCDQAKEN- 233

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
               A++  +D GY D+P  DE  L+ AVA   PVS+AIDAS Q FQFYSEGV+   EC 
Sbjct: 234 ----AQAVTID-GYEDVPANDESALQKAVAGQ-PVSVAIDASGQDFQFYSEGVF-TGEC- 285

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           ST LDH V  VGYG   +G  YW+VKNSW   WG++GYI+M R     E  C
Sbjct: 286 STDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQTEGLC 337


>gi|356577763|ref|XP_003556992.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 89/173 (51%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++ E +YPY+A+                               D  C
Sbjct: 194 MDGAFKFIIQNHGLNNEPNYPYKAV-------------------------------DGKC 222

Query: 61  RYKRAKSG-AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             K A +  A   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 223 NAKAAANHVATITGYEDVPVNNEKALQKAVAN-QPVSVAIDASGSDFQFYQSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R     E  C
Sbjct: 281 -GTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGYIRMQRGVKAEEGLC 332


>gi|2224812|emb|CAB09699.1| cysteine endopeptidase EP-A [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 93/172 (54%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I+ N GI TES+YPY+                          Q +     +N 
Sbjct: 200 MDYAFQFIQKN-GITTESNYPYQG------------------------EQGSCDQAKEN- 233

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
               A++  +D GY D+P  DE  L+ AVA   PVS+AIDAS Q FQFYSEGV+   EC 
Sbjct: 234 ----AQAVTID-GYEDVPANDESALQKAVAGQ-PVSVAIDASGQDFQFYSEGVF-TGEC- 285

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           ST LDH V  VGYG   +G  YW+VKNSW   WG++GYI+M R     E  C
Sbjct: 286 STDLDHGVAAVGYGATRDGTKYWIVKNSWGEDWGEKGYIRMQRGVSQTEGLC 337


>gi|356517348|ref|XP_003527349.1| PREDICTED: vignain-like [Glycine max]
          Length = 343

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 89/173 (51%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++ E +YPY+A+                               D  C
Sbjct: 194 MDGAFKFIIQNHGLNNEPNYPYKAV-------------------------------DGKC 222

Query: 61  RYKRAKSG-AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             K A +  A   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 223 NAKAAANHVATITGYEDVPVNNEKALQKAVAN-QPVSVAIDASGSDFQFYQSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R     E  C
Sbjct: 281 -GTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGYIRMQRGVKAEEGLC 332


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 37/174 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I  N GIDTE  YPY+ +                               D  C
Sbjct: 193 MDYAFQFIIQNGGIDTEEDYPYQGI-------------------------------DGTC 221

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              + K+  V   GY D+P  +E  LK AV+   PVS+AI+AS ++ Q Y  GV+   +C
Sbjct: 222 DQTKKKTKVVQIDGYEDVPSNNENALKKAVSH-QPVSVAIEASGRALQLYQSGVF-TGKC 279

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN-RVYYEPEC 172
             T LDH V+VVGYGT ENG DYWLV+NSW T WG++GY KM RN R   E +C
Sbjct: 280 -GTALDHGVVVVGYGT-ENGVDYWLVRNSWGTGWGEDGYFKMERNVRSTSEGKC 331


>gi|357483847|ref|XP_003612210.1| Cysteine proteinase [Medicago truncatula]
 gi|355513545|gb|AES95168.1| Cysteine proteinase [Medicago truncatula]
          Length = 344

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 86/173 (49%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++TE+ YPY+ +                               D  C
Sbjct: 195 MDDAFKFIIQNHGLNTEAQYPYQGV-------------------------------DGTC 223

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              +A   A    GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY  GV +   C
Sbjct: 224 NANKASIQATTITGYEDVPANNEQALQKAVAN-QPISVAIDASGSDFQFYKSGV-FTGSC 281

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW T WG+EGYI M R     E  C
Sbjct: 282 -GTELDHGVTAVGYGVSNDGTKYWLVKNSWGTDWGEEGYIMMQRGVEAAEGLC 333


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 89/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+ S               +C        V + D   
Sbjct: 206 MDYAFEFIMKNGGIDTEEDYPYKAVDS---------------MCDPNRKNARVVTID--- 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P+ DE  L+ AVA   PVS+AI+A  ++FQ Y  GV +   C 
Sbjct: 248 ------------GYEDVPQNDEKSLRKAVAN-QPVSVAIEAGGRAFQLYQSGV-FTGSC- 292

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GYI+M RN
Sbjct: 293 GTQLDHGVVAVGYGT-ENGVDYWVVRNSWGPAWGENGYIRMERN 335



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 5/61 (8%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN----RENNCGVASSASF 230
           TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GYI+M RN        CG+A  AS+
Sbjct: 294 TQLDHGVVAVGYGT-ENGVDYWVVRNSWGPAWGENGYIRMERNVASTETGKCGIAMEASY 352

Query: 231 P 231
           P
Sbjct: 353 P 353


>gi|111073717|dbj|BAF02547.1| triticain beta [Triticum aestivum]
          Length = 472

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+                              G  + 
Sbjct: 216 MDDAFEFIIKNGGIDTEDDYPYKAI-----------------------------DGRCDV 246

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    C 
Sbjct: 247 LRKNAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYHSGVF-SGRC- 302

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 303 GTQLDHGVVAVGYGT-ENGKDYWIVRNSWGPNWGESGYLRMERN 345


>gi|340728972|ref|XP_003402785.1| PREDICTED: counting factor associated protein D-like [Bombus
           terrestris]
          Length = 549

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 3/111 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C        A   GYV++  GD   LK A+A  GP+S+AIDASH++F FYS GVYY+
Sbjct: 426 DGYCHVNNVTLTAKITGYVNVTSGDANALKVAIAKHGPISVAIDASHKTFSFYSHGVYYD 485

Query: 117 PECNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             C +T+  LDHAVL VGYG+  NG DYWLVKNSW+  WG++GYI M++ +
Sbjct: 486 ESCGNTEESLDHAVLAVGYGS-LNGKDYWLVKNSWSNYWGNDGYILMSQEK 535


>gi|333827692|gb|AEG19548.1| cathepsin L-like cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++D H I+ ES+YPY A                                D  C
Sbjct: 192 MSNAFKYLED-HSIEPESAYPYRAT-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          +IPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 220 RYNESLGVGTVTDIGEIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL VGYG   +G  YWLVKNSW + WG +GYI MA++
Sbjct: 280 SKFLNHGVLAVGYG-KLDGKPYWLVKNSWGSGWGMKGYIMMAKD 322


>gi|37780049|gb|AAP32197.1| cysteine protease 10 [Trifolium repens]
          Length = 272

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG+ TE  YPYE +                               D  C
Sbjct: 123 MDDAFKFIIQNHGLSTEVQYPYEGV-------------------------------DGTC 151

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
               A   AV   GY D+P  +E  L+ AVA   P+S+AIDAS   FQFY+ GV+    C
Sbjct: 152 NTNEASIHAVTITGYEDVPANNELALQKAVANQ-PISVAIDASGSDFQFYNSGVF-TGSC 209

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG   +G  YWLVKNSW   WG+EGYI+M R     E  C
Sbjct: 210 -GTELDHGVTAVGYGVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIDAAEGLC 261



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 107 QFYSEGVYYEPECNSTQLD-HAVLVVGYGTDENGNDYWLVKNSWN----TTWGDEGYIKM 161
           Q+  EGV  +  CN+ +   HAV + GY      N+  L K   N          G    
Sbjct: 141 QYPYEGV--DGTCNTNEASIHAVTITGYEDVPANNELALQKAVANQPISVAIDASGSDFQ 198

Query: 162 ARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---R 218
             N   +   C  T+LDH V  VGYG   +G  YWLVKNSW   WG+EGYI+M R     
Sbjct: 199 FYNSGVFTGSC-GTELDHGVTAVGYGVGNDGTKYWLVKNSWGADWGEEGYIRMQRGIDAA 257

Query: 219 ENNCGVASSASFP 231
           E  CG+A  AS+P
Sbjct: 258 EGLCGIAMQASYP 270


>gi|170571946|ref|XP_001891927.1| Cathepsin L-like precursor [Brugia malayi]
 gi|158603282|gb|EDP39263.1| Cathepsin L-like precursor, putative [Brugia malayi]
          Length = 339

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   F Y K +HGI  ES YPY                              V +   +C
Sbjct: 194 MVPVFTYAK-SHGIVAESKYPY------------------------------VFTAKRSC 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++++A   A D+GY++I +GDE  LK AVA  GPV + I    +SF+FY  G+Y    C 
Sbjct: 223 KWRKADVVATDKGYLEIRDGDELGLKHAVAKHGPVVVGISGHQRSFRFYKSGIYSSNTC- 281

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+  HAVL+VGYGT     DYW++KNSW T WG +GY  MARN+
Sbjct: 282 -TKPSHAVLIVGYGTHRTHGDYWIIKNSWGTHWGVKGYGYMARNK 325


>gi|356517358|ref|XP_003527354.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
 gi|356577767|ref|XP_003556994.1| PREDICTED: LOW QUALITY PROTEIN: vignain-like [Glycine max]
          Length = 343

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 87/164 (53%), Gaps = 35/164 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  NHG++ E +YPY+A+                               D  C
Sbjct: 194 MDGAFKFIIQNHGLNNEPNYPYKAV-------------------------------DGKC 222

Query: 61  RYKRAKSG-AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             K A +  A   GY D+P  +E  L+ AVA   PVS+AIDAS   FQFY  GV+    C
Sbjct: 223 NAKAAANHVATITGYEDVPVNNEKALQKAVAN-QPVSVAIDASGSDFQFYQSGVF-TGSC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
             T+LDH V  VGYG   +G +YWLVKNSW T WG+EGYI+M R
Sbjct: 281 -GTELDHGVTAVGYGVSADGTEYWLVKNSWGTEWGEEGYIRMQR 323


>gi|332384364|gb|AEE69034.1| cysteine protease [Taenia pisiformis]
          Length = 338

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 85/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y++D H I+ ES+YPY A                                D  C
Sbjct: 192 MSNAFKYLED-HSIEPESAYPYRAT-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          +IPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 220 RYNESLGVGTVTDIGEIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKSHWCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL VGYG   +G  YWLVKNSW + WG +GYI MA++
Sbjct: 280 SKFLNHGVLAVGYG-KLDGKPYWLVKNSWGSGWGMKGYIMMAKD 322


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 93/174 (53%), Gaps = 37/174 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I  N GIDTE  YPY+ +                               D  C
Sbjct: 193 MDYAFQFIIQNGGIDTEEDYPYQGI-------------------------------DGTC 221

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              + K+  V   GY D+P  +E  LK AV+   PVS+AI+AS ++ Q Y  GV+   +C
Sbjct: 222 DETKKKTKVVQIDGYEDVPSNNENALKKAVSH-QPVSVAIEASGRALQLYQSGVF-TGKC 279

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN-RVYYEPEC 172
             T LDH V+VVGYGT ENG DYWLV+NSW T WG++GY KM RN R   E +C
Sbjct: 280 -GTALDHGVVVVGYGT-ENGVDYWLVRNSWGTGWGEDGYFKMERNVRSTSEGKC 331


>gi|160858205|dbj|BAF93840.1| triticain beta 2 [Triticum aestivum]
          Length = 469

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+                              G  + 
Sbjct: 213 MDDAFEFIIKNGGIDTEDDYPYKAI-----------------------------DGRCDV 243

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    C 
Sbjct: 244 LRKNAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYHSGVF-SGRC- 299

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 300 GTQLDHGVVAVGYGT-ENGKDYWIVRNSWGPNWGEAGYLRMERN 342


>gi|380254588|gb|AFD36229.1| cysteine proteinase [Acanthamoeba castellanii]
          Length = 359

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 2/107 (1%)

Query: 60  CRYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
           CRY  A    V  + Y  +  G E  L A  A +GPV++AID+S +SF +YS G YY+  
Sbjct: 226 CRYTSASPAVVGVKNYASVKAGSESDLLANAA-VGPVTVAIDSSKRSFIYYSGGYYYDQT 284

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+S+ LDHAV VVG+GTD    DYWLVKNSW   WG+ GY+KMARNR
Sbjct: 285 CSSSYLDHAVTVVGWGTDATNGDYWLVKNSWGAAWGEAGYVKMARNR 331


>gi|198464814|ref|XP_002134852.1| GA23577 [Drosophila pseudoobscura pseudoobscura]
 gi|198149893|gb|EDY73479.1| GA23577 [Drosophila pseudoobscura pseudoobscura]
          Length = 338

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 86/163 (52%), Gaps = 34/163 (20%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           AF Y +DN GI T+ SYP      F+P                           + CRY 
Sbjct: 192 AFNYTRDN-GIATKESYP------FVPL-------------------------SEECRYD 219

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC--NS 121
           ++ S    RGYV +   DE +L   V  IGPV+++ID  HQSFQ Y  GV  +  C  N 
Sbjct: 220 KSTSAGRVRGYVTLNNADERELAEVVYNIGPVAVSIDHLHQSFQNYKRGVLKDENCRSNR 279

Query: 122 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             L HAVLVVG+GTD    DYWL+KNS+ T+WG +GY K+ARN
Sbjct: 280 ASLRHAVLVVGFGTDAEWGDYWLIKNSYGTSWGIDGYFKLARN 322


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 38/166 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I  N GIDTE  YPY+A+                               D  C
Sbjct: 268 MDAAFDFIIKNGGIDTEGDYPYKAV-------------------------------DGKC 296

Query: 61  RYKR--AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
              R  AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    
Sbjct: 297 DINRENAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVFT-GT 353

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C +T LDH V+ VGYGT ENG DYW+V+NSW   WG++GYI+M RN
Sbjct: 354 C-TTNLDHGVVAVGYGT-ENGKDYWIVRNSWGAKWGEDGYIRMERN 397


>gi|326507362|dbj|BAK03074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 473

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+                              G  + 
Sbjct: 217 MDDAFEFIIKNGGIDTEDDYPYKAV-----------------------------DGRCDV 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    C 
Sbjct: 248 LRKNAKVVSID-GFEDVPENDEKSLQKAVAH-HPVSVAIEAGGREFQLYHSGVF-SGRC- 303

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 304 GTQLDHGVVAVGYGT-ENGKDYWIVRNSWGPNWGEAGYLRMERN 346


>gi|204307508|gb|ACI00280.1| triticain beta 2 [Hordeum vulgare]
          Length = 473

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+                              G  + 
Sbjct: 217 MDDAFEFIIKNGGIDTEDDYPYKAV-----------------------------DGRCDV 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    C 
Sbjct: 248 LRKNAKVVSID-GFEDVPENDEKSLQKAVAH-HPVSVAIEAGGREFQLYHSGVF-SGRC- 303

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 304 GTQLDHGVVAVGYGT-ENGKDYWIVRNSWGPNWGEAGYLRMERN 346


>gi|5915887|sp|O17473.1|CATL_BRUPA RecName: Full=Cathepsin L-like; Flags: Precursor
 gi|2641244|gb|AAB86867.1| cathepsin L-like cysteine protease [Brugia pahangi]
          Length = 395

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 84/165 (50%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY    +GI  ES YPY                                  +  C
Sbjct: 251 MPTAFQYA-SRYGIAMESRYPY-------------------------------VGTEQRC 278

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R++++ +   D G+ +I  GDE  LK AVA  GPV + I  S +SF+FY +GVY E  C 
Sbjct: 279 RWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCG 338

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
               DHAVL VGYGT  +  DYW+VKNSW T WG +GY+ MARNR
Sbjct: 339 RP--DHAVLAVGYGTHPSYGDYWIVKNSWGTDWGKDGYVYMARNR 381


>gi|31558997|gb|AAP49831.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 34/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ A+QY+K   G++TESSYPY A+                               +  C
Sbjct: 177 MENAYQYLKQ-FGLETESSYPYTAV-------------------------------EGQC 204

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY +    A   GY  +P G E +LK  V   GP ++A+D     F  Y  G+Y    C+
Sbjct: 205 RYNKQLGVAKVTGYYTVPSGSEVELKNLVGAEGPAAVAVDV-ESDFMMYRSGIYQSQTCS 263

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
             +++HAVL VGYGT + G DYW+VKNSW  +WG+ GYI+MARNR
Sbjct: 264 PLRVNHAVLAVGYGT-QGGTDYWIVKNSWGLSWGERGYIRMARNR 307



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 53/72 (73%), Gaps = 1/72 (1%)

Query: 161 MARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNREN 220
           M R+ +Y    C+  +++HAVL VGYGT + G DYW+VKNSW  +WG+ GYI+MARNR N
Sbjct: 251 MYRSGIYQSQTCSPLRVNHAVLAVGYGT-QGGTDYWIVKNSWGLSWGERGYIRMARNRGN 309

Query: 221 NCGVASSASFPL 232
            CG+AS AS P+
Sbjct: 310 MCGIASLASLPI 321


>gi|1514953|dbj|BAA11170.1| cysteine proteinase [Oryza sativa (japonica cultivar-group)]
          Length = 368

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 90/168 (53%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK + GI TES+YPY A                                +  C
Sbjct: 201 MENAFEYIKHSGGITTESAYPYRAA-------------------------------NGTC 229

Query: 61  RYKRAKSG-AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              RA+ G  V  G+ ++P   E  L  AVA   PVS+AIDA  QSFQFYS+GV+   +C
Sbjct: 230 DAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVF-AGDC 287

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVY 167
             T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+  Y
Sbjct: 288 G-TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGY 334



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
           T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+   +   CG+A  AS+P
Sbjct: 289 TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEASYP 348

Query: 232 L 232
           +
Sbjct: 349 V 349


>gi|414591545|tpg|DAA42116.1| TPA: hypothetical protein ZEAMMB73_388689 [Zea mays]
          Length = 384

 Score =  116 bits (290), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 90/163 (55%), Gaps = 33/163 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI+ N G+ TES+YPY A          +R C       +RS+ VT+       
Sbjct: 207 MDYAFQYIQRNGGVTTESNYPYLAE---------QRSC---NKAKERSHDVTID------ 248

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P  +E  L+ AVA+  PV++AI+AS Q FQFYSEGV+    C 
Sbjct: 249 ------------GYEDVPANNEDALQKAVASQ-PVAVAIEASGQDFQFYSEGVF-TGSCG 294

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH V  VGYGT  +G  YW VKNSW   WG+ GYI+M R
Sbjct: 295 -TDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIRMQR 336



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
           T LDH V  VGYGT  +G  YW VKNSW   WG+ GYI+M R   ++   CG+A   S+P
Sbjct: 295 TDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIRMQRGVPDSRGLCGIAMEPSYP 354


>gi|226501480|ref|NP_001150266.1| cysteine protease 1 precursor [Zea mays]
 gi|195637948|gb|ACG38442.1| cysteine protease 1 precursor [Zea mays]
          Length = 462

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 90/166 (54%), Gaps = 38/166 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I  N GIDTE  YPY+A+                               D  C
Sbjct: 208 MDAAFDFIIKNGGIDTEGDYPYKAV-------------------------------DGKC 236

Query: 61  RYKR--AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
              R  AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    
Sbjct: 237 DINRENAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVF-SGT 293

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C +T LDH V+ VGYGT ENG DYW+V+NSW   WG++GYI+M RN
Sbjct: 294 C-TTNLDHGVVAVGYGT-ENGKDYWIVRNSWGAKWGEDGYIRMERN 337


>gi|4733887|gb|AAD02173.3| cysteine proteinase [Acanthamoeba culbertsoni]
          Length = 482

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 64/158 (40%), Positives = 83/158 (52%), Gaps = 32/158 (20%)

Query: 8   IKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYKRAKS 67
           I +N  + T++SYPY A  S                                CRY  ++ 
Sbjct: 233 ISNNARLMTQASYPYIARQS-------------------------------TCRYVPSQG 261

Query: 68  GAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHA 127
               R  + +  G E  L A  A I PV++AID S +SF FYS G YY+P C+ST L+HA
Sbjct: 262 VQGIRNIMRVRAGSESDLLAKAA-IAPVTVAIDGSKRSFMFYSGGYYYDPTCSSTNLNHA 320

Query: 128 VLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           VLVVG+GTD    DYW+ KN W T WGD+GY+ MARN+
Sbjct: 321 VLVVGWGTDPQRGDYWIAKNEWGTAWGDDGYVYMARNK 358



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 51/67 (76%)

Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVAS 226
           YY+P C+ST L+HAVLVVG+GTD    DYW+ KN W T WGD+GY+ MARN+ NNCG+AS
Sbjct: 307 YYDPTCSSTNLNHAVLVVGWGTDPQRGDYWIAKNEWGTAWGDDGYVYMARNKNNNCGIAS 366

Query: 227 SASFPLV 233
            A  P +
Sbjct: 367 LAVLPCL 373


>gi|444515095|gb|ELV10757.1| Aryl hydrocarbon receptor nuclear translocator [Tupaia chinensis]
          Length = 786

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/147 (42%), Positives = 82/147 (55%), Gaps = 32/147 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AFQY++ N GID+E +YPY                                  D++C
Sbjct: 671 MTNAFQYVQKNRGIDSEDAYPYVGQ-------------------------------DESC 699

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y      A  RGY +IP G+E  LK AVA +GPVS+AIDAS  SFQFYS+GVYY+  C+
Sbjct: 700 MYNPTGKAAKCRGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCS 759

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKN 147
           S  ++HAVL VGYG  + G+ +W++KN
Sbjct: 760 SDNVNHAVLAVGYGV-QKGSKHWIIKN 785


>gi|225458143|ref|XP_002280937.1| PREDICTED: cysteine proteinase RD21a [Vitis vinifera]
 gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 91/178 (51%), Gaps = 36/178 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD A+Q++  N GID+E+ YPY  M                               D  C
Sbjct: 181 MDYAYQFVIKNQGIDSEADYPYVGM-------------------------------DKPC 209

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             ++ K   V   GY DIP  DE +L   VA   PVS+ I  S ++FQ YS+GVY  P C
Sbjct: 210 NKEKLKKHIVTIDGYTDIPPNDEKQLLQVVAK-QPVSVGICGSEKTFQLYSKGVYTGP-C 267

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQL 177
           +ST LDHAVL+VGYGT E+G D+W+VKNSW   WG  GYI M RN    E  C    L
Sbjct: 268 SST-LDHAVLIVGYGT-EDGVDFWIVKNSWGEHWGMRGYIHMLRNNGTAEGICGINML 323



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 6/81 (7%)

Query: 154 GDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIK 213
           G E   ++    VY  P C+ST LDHAVL+VGYGT E+G D+W+VKNSW   WG  GYI 
Sbjct: 250 GSEKTFQLYSKGVYTGP-CSST-LDHAVLIVGYGT-EDGVDFWIVKNSWGEHWGMRGYIH 306

Query: 214 MARNR---ENNCGVASSASFP 231
           M RN    E  CG+   AS+P
Sbjct: 307 MLRNNGTAEGICGINMLASYP 327


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/163 (43%), Positives = 86/163 (52%), Gaps = 38/163 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF+YI  N G+DTE  YPY A                  +C K              
Sbjct: 185 MDNAFKYIISNGGLDTEQDYPYTARDG---------------VCDKS------------- 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K +K      GY D+P+ +E +L AAV   GPVS+AI+A  QSFQ YS GV+  P C 
Sbjct: 217 --KESKHAVSISGYKDVPQNNEDQLAAAVEK-GPVSVAIEADQQSFQMYSSGVFSGP-CG 272

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
            T LDH VLVVGY +D     YW+VKNSW  +WGD+GYI M R
Sbjct: 273 -TNLDHGVLVVGYTSD-----YWIVKNSWGASWGDQGYIMMKR 309



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWN-----TTWGDEGYIKMARNRVYYEPECNST 175
           S +  HAV + GY      N+  L               D+   +M  + V+  P C  T
Sbjct: 216 SKESKHAVSISGYKDVPQNNEDQLAAAVEKGPVSVAIEADQQSFQMYSSGVFSGP-CG-T 273

Query: 176 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN--CGVASSASFPLV 233
            LDH VLVVGY +D     YW+VKNSW  +WGD+GYI M R   +   CG+A   S+P+ 
Sbjct: 274 NLDHGVLVVGYTSD-----YWIVKNSWGASWGDQGYIMMKRGVSSAGICGIAMQPSYPIA 328


>gi|4426617|gb|AAD20453.1| cysteine endopeptidase precursor [Oryza sativa]
          Length = 368

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/168 (42%), Positives = 90/168 (53%), Gaps = 35/168 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+YIK + GI TES+YPY A                                +  C
Sbjct: 201 MENAFEYIKHSGGITTESAYPYRAA-------------------------------NGTC 229

Query: 61  RYKRAKSG-AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              RA+ G  V  G+ ++P   E  L  AVA   PVS+AIDA  QSFQFYS+GV+   +C
Sbjct: 230 DAVRARGGLVVIDGHQNVPANSEAALAKAVANQ-PVSVAIDAGDQSFQFYSDGVF-AGDC 287

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVY 167
             T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+  Y
Sbjct: 288 G-TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGY 334



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
           T LDH V VVGYG   +G +YW+VKNSW T WG+ GYI+M R+   +   CG+A  AS+P
Sbjct: 289 TDLDHGVAVVGYGETNDGTEYWIVKNSWGTAWGEGGYIRMQRDSGYDGGLCGIAMEASYP 348

Query: 232 L 232
           +
Sbjct: 349 V 349


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 89/166 (53%), Gaps = 38/166 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I  N GIDTE  YPY+A+                               D  C
Sbjct: 211 MDAAFDFIIKNGGIDTEGDYPYKAV-------------------------------DGKC 239

Query: 61  RYKR--AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
              R  AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    
Sbjct: 240 DINRENAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYKAGVFTGT- 296

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             +T LDH V+ VGYGT ENG DYW+V+NSW   WG++GYI+M RN
Sbjct: 297 -CTTNLDHGVVAVGYGT-ENGKDYWIVRNSWGAKWGEDGYIRMERN 340


>gi|297799636|ref|XP_002867702.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313538|gb|EFH43961.1| hypothetical protein ARALYDRAFT_329301 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 93/180 (51%), Gaps = 39/180 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKR---SNQVTVTSGD 57
           MD AFQ++ +N G+D+++ YPY+    +               C+++   SN++      
Sbjct: 202 MDAAFQFLINNGGLDSDTDYPYQGSQGY---------------CNRKESTSNKIITID-- 244

Query: 58  DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEP 117
                           Y D+P  DE  L+ AVA   PVS+ +D   Q F  Y  G+Y  P
Sbjct: 245 ---------------SYEDVPANDEISLQKAVAH-QPVSVGVDKKSQEFMLYRSGIYNGP 288

Query: 118 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQL 177
            C  T LDHA+++VGYG+ ENG DYW+V+NSW TTWGD GY KMARN  Y    C    L
Sbjct: 289 -C-GTDLDHALVIVGYGS-ENGQDYWIVRNSWGTTWGDAGYAKMARNFEYPSGVCGIAML 345


>gi|13242025|gb|AAK16513.1|AF331035_1 cathepsin L-like cysteine proteinase [Brugia malayi]
          Length = 395

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   F Y K +HGI  ES YPY                              V +   +C
Sbjct: 250 MVPVFTYAK-SHGIVAESKYPY------------------------------VFTAKRSC 278

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++++A   A D+GY++I +GDE  LK AVA  GPV + I    +SF+FY  G+Y    C 
Sbjct: 279 KWRKADVVATDKGYLEIRDGDELGLKHAVAKHGPVVVGISGHQRSFRFYKSGIYSSNTC- 337

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+  HAVL+VGYGT     DYW++KNSW T WG +GY  MARN+
Sbjct: 338 -TKPSHAVLIVGYGTHRTHGDYWIIKNSWGTHWGVKGYGYMARNK 381


>gi|194352756|emb|CAQ00106.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A+                              G  + 
Sbjct: 217 MDDAFEFIIKNGGIDTEDDYPYKAV-----------------------------DGRCDV 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    C 
Sbjct: 248 LRKNAKVVSID-GFEDVPENDEKSLQKAVAH-HPVSVAIEAGGREFQLYHSGVF-SGRC- 303

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            TQLDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 304 GTQLDHGVVAVGYGT-ENGKDYWIVRNSWGPNWGEAGYLRMERN 346


>gi|167520318|ref|XP_001744498.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776829|gb|EDQ90447.1| predicted protein [Monosiga brevicollis MX1]
          Length = 543

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 2/110 (1%)

Query: 56  GDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYY 115
            D  C  K    GA    YV++   D   +   +AT GP++IAIDAS +SF FYS GVYY
Sbjct: 421 ADGVCHSKGTTPGATLATYVNVTSADMNTVLDTLATKGPLAIAIDASLRSFNFYSSGVYY 480

Query: 116 EPECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           + +C +T   LDHAVL VGYGTD  GNDYW+VKNSW+T +GD GYI M+R
Sbjct: 481 DADCGNTTDALDHAVLAVGYGTDALGNDYWIVKNSWSTHYGDNGYILMSR 530


>gi|144905108|dbj|BAF56428.1| cysteine proteinase [Lotus japonicus]
          Length = 342

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 87/173 (50%), Gaps = 35/173 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N G++TE+ YPY+ +                               D  C
Sbjct: 193 MDDAFKFIMQNKGLNTEAKYPYQGV-------------------------------DATC 221

Query: 61  RY-KRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
                AK  A  +G+ D+P   E  L  AVA   P+S+AIDAS   FQFYS G++    C
Sbjct: 222 NANAEAKDAASIKGFEDVPANSESALLKAVAN-QPISVAIDASGSEFQFYSSGLF-TGSC 279

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
             T+LDH V  VGYG  ++G  YWLVKNSW   WG+EGYI+M R+    E  C
Sbjct: 280 G-TELDHGVTAVGYGVSDDGTKYWLVKNSWGEQWGEEGYIRMQRDVAAEEGLC 331



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V  VGYG  ++G  YWLVKNSW   WG+EGYI+M R+    E  CG+A  AS+P
Sbjct: 281 TELDHGVTAVGYGVSDDGTKYWLVKNSWGEQWGEEGYIRMQRDVAAEEGLCGIAMQASYP 340


>gi|68137209|gb|AAY85545.1| male accessory gland protein [Drosophila simulans]
          Length = 362

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 83/119 (69%), Gaps = 4/119 (3%)

Query: 58  DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEP 117
           D C+Y  +KSGA  +G+  IP  DE +LK  VAT+GPV+ +++   ++ + Y+ G+Y + 
Sbjct: 243 DTCKYDGSKSGATLQGFAAIPPKDEEQLKKVVATLGPVACSVNG-LETLKNYAGGIYNDD 301

Query: 118 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR--NRVYYEPECNS 174
           ECN  + +H++LVVGYG+ ENG DYW+VKNSW+ TWG++GY ++ R  N  +   EC+S
Sbjct: 302 ECNKGEPNHSILVVGYGS-ENGQDYWIVKNSWDDTWGEKGYFRLPRGKNYCFIAKECSS 359



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 2/68 (2%)

Query: 166 VYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVA 225
           +Y + ECN  + +H++LVVGYG+ ENG DYW+VKNSW+ TWG++GY ++ R + N C +A
Sbjct: 297 IYNDDECNKGEPNHSILVVGYGS-ENGQDYWIVKNSWDDTWGEKGYFRLPRGK-NYCFIA 354

Query: 226 SSASFPLV 233
              S P V
Sbjct: 355 KECSSPGV 362


>gi|46948156|gb|AAT07060.1| cathepsin L-like cysteine proteinase, partial [Brugia malayi]
          Length = 395

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 86/165 (52%), Gaps = 33/165 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M   F Y K +HGI  ES YPY                              V +   +C
Sbjct: 250 MVPVFTYAK-SHGIVAESKYPY------------------------------VFTAKRSC 278

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++++A   A D+GY++I +GDE  LK AVA  GPV + I    +SF+FY  G+Y    C 
Sbjct: 279 KWRKADVVATDKGYLEIRDGDELGLKHAVAKHGPVVVGISGHQRSFRFYKSGIYSSNTC- 337

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
            T+  HAVL+VGYGT     DYW++KNSW T WG +GY  MARN+
Sbjct: 338 -TKPSHAVLIVGYGTHRTHGDYWIIKNSWGTHWGVKGYGYMARNK 381


>gi|212275600|ref|NP_001130571.1| uncharacterized protein LOC100191670 [Zea mays]
 gi|194689516|gb|ACF78842.1| unknown [Zea mays]
          Length = 171

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 89/164 (54%), Gaps = 32/164 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF++IK + GI TES+YPY A                       SN        D  
Sbjct: 1   MENAFEFIKSHGGITTESAYPYHA-----------------------SNGTC-----DGA 32

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           R +R +  A+D G+  +P G E  L  AVA   PVS+AIDA  Q+ QFYSEGV+   +C 
Sbjct: 33  RARRGRVVAID-GHQAVPAGSEDALAKAVAHQ-PVSVAIDAGGQALQFYSEGVFTG-DCG 89

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T LDH V  VGYG  ++G  YW+VKNSW  +WG+ GYI+M R 
Sbjct: 90  -TDLDHGVAAVGYGVSDDGTPYWIVKNSWGPSWGEGGYIRMQRG 132



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN--CGVASSASFPL 232
           T LDH V  VGYG  ++G  YW+VKNSW  +WG+ GYI+M R   N   CG+A  ASFP+
Sbjct: 90  TDLDHGVAAVGYGVSDDGTPYWIVKNSWGPSWGEGGYIRMQRGTGNGGLCGIAMEASFPI 149


>gi|357156854|ref|XP_003577598.1| PREDICTED: thiol protease SEN102-like [Brachypodium distachyon]
          Length = 368

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 93/172 (54%), Gaps = 33/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I+ N G+ +E++YPY+   +              T    + N   V       
Sbjct: 205 MDYAFQFIQKNGGVTSEANYPYQGQQN--------------TCDQAKENTHDV------- 243

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                   A+D GY D+P  DE  L+ AVA   PVS+AI+AS Q FQFYSEGV+   +C 
Sbjct: 244 --------AID-GYEDVPANDESALQKAVA-YQPVSVAIEASGQDFQFYSEGVF-TGQC- 291

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
           +T LDH V  VGYGT  +G  YW+VKNSW   WG++GYI+M R     E  C
Sbjct: 292 TTDLDHGVAAVGYGTARDGTKYWIVKNSWGLDWGEKGYIRMQRGVSQAEGLC 343


>gi|3451077|emb|CAA20473.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7269200|emb|CAB79307.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 355

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 89/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ++ +N+G+D+E  YPY+                    C+++   + V + D   
Sbjct: 201 MDTAFQFLINNNGLDSEKDYPYQGTQGS---------------CNRKQVHLLVITIDS-- 243

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                        Y D+P  DE  L+ AVA   PVS+ +D   Q F  Y   +Y  P C 
Sbjct: 244 -------------YEDVPANDEISLQKAVAH-QPVSVGVDKKSQEFMLYRSCIYNGP-C- 287

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T LDHA+++VGYG+ ENG DYW+V+NSW TTWGD GYIK+ARN
Sbjct: 288 GTNLDHALVIVGYGS-ENGQDYWIVRNSWGTTWGDAGYIKIARN 330


>gi|356563584|ref|XP_003550041.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 366

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 94/175 (53%), Gaps = 34/175 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDT+  YPY           F  +C                    + 
Sbjct: 198 MDYAFEFIIQNGGIDTDKDYPYRG---------FDGIC--------------------DP 228

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK+  +D GY D+P  DE  LK AVA   PVSIAI+AS ++ Q Y  GV+   EC 
Sbjct: 229 TKKNAKAVNID-GYEDVPPYDENALKKAVAR-QPVSIAIEASGRALQLYQSGVF-TGEC- 284

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNST 175
            T LDH V+VVGYG+ ENG DYWLV+NSW T WG++GY KM RN      +C  T
Sbjct: 285 GTSLDHGVVVVGYGS-ENGVDYWLVRNSWGTGWGEDGYFKMQRNVRTPTGKCGIT 338


>gi|301628647|ref|XP_002943461.1| PREDICTED: cathepsin S-like [Xenopus (Silurana) tropicalis]
          Length = 334

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 71/97 (73%), Gaps = 2/97 (2%)

Query: 69  AVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAV 128
            V + +  +  G+E  LK AV   GPVS+ ID+S   F+ Y+ GVYY+P C +T LDH+V
Sbjct: 225 GVVKQFYRLHAGNETALKKAVGIDGPVSVVIDSSCPGFRMYNSGVYYDPYC-TTNLDHSV 283

Query: 129 LVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           LVVGYGTD NGNDYWL+KNSW   WG++GY+KMARNR
Sbjct: 284 LVVGYGTD-NGNDYWLIKNSWGIGWGEKGYVKMARNR 319


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 89/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I DN G+DTE  YPYEA                               G  + 
Sbjct: 192 MDYAFQFIIDNGGLDTEEDYPYEAF-----------------------------DGQCDP 222

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D  Y D+P  DE  LK AVA   PVS+AI+AS  + Q Y  GV+   +C 
Sbjct: 223 TRKNAKVVSID-AYEDVPANDEESLKKAVAH-QPVSVAIEASGLALQLYQSGVF-TGKCG 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  LDH V+ VGYG  ENG DYWLV+NSW T+WG++GY K+ RN
Sbjct: 280 SA-LDHGVVAVGYGK-ENGVDYWLVRNSWGTSWGEDGYFKLERN 321


>gi|405964107|gb|EKC29629.1| Cysteine proteinase 3 [Crassostrea gigas]
          Length = 212

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 2/107 (1%)

Query: 59  NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
            C+ K+    A   G   + +GDE  LK AV    PV  A+DASH SFQ Y  GVYYEP 
Sbjct: 92  TCQSKQCTPVAKVTGVTQVKKGDEGDLKIAVYR-QPVVTAVDASHSSFQLYRSGVYYEPR 150

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           C+ST+LDHA+LVVGYGT  +G D+W+ KNSW   WG +GYI M+RN+
Sbjct: 151 CSSTRLDHALLVVGYGT-LDGKDFWIAKNSWGINWGMKGYILMSRNK 196


>gi|195984441|gb|ACG63793.1| silicatein A1 [Latrunculia oparinae]
          Length = 329

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 86/165 (52%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+  N G+DT +SYP+    S                               +C
Sbjct: 182 MLYAFKYVIANEGVDTANSYPFYGKQS-------------------------------SC 210

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            Y    +     G V I +G E  L  AVA +GPV++AID S  +F+FYS GVY    C+
Sbjct: 211 VYNEKYAAVKISGMVRISQGSESDLLGAVANVGPVAVAIDGSSNAFRFYSSGVYDSSRCS 270

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           S++L+HA++V GYG+  +G  YWLVKNSW   WG+ GYI MAR +
Sbjct: 271 SSKLNHAIVVTGYGS-YSGKKYWLVKNSWGKNWGNYGYIMMARGK 314


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I  N G++TE  YPY                               T+G  N 
Sbjct: 168 MDYAFQFIMKNGGLNTEKDYPYHG-----------------------------TNGKCNS 198

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K ++   +D GY D+P  DE  LK AV +  PVS+AIDA  ++FQ Y  G+ +  +C 
Sbjct: 199 LLKNSRVVTID-GYEDVPSKDETALKRAV-SYQPVSVAIDAGGRAFQHYQSGI-FTGKC- 254

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            T +DHAV+ VGYG+ ENG DYW+V+NSW T WG++GYI+M RN      +C
Sbjct: 255 GTNMDHAVVAVGYGS-ENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKC 305


>gi|57282619|emb|CAE54307.1| cysteine proteinase [Gossypium hirsutum]
          Length = 372

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I DN GIDTE  YPY   + F                   +NQ   T      
Sbjct: 204 MDYAFQFIIDNGGIDTEKDYPY---LGF-------------------NNQCDPTK----- 236

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK  ++D GY D+P  +E  LK AVA   PVSIAI+A  ++FQ Y  GV+   EC 
Sbjct: 237 --KNAKVVSID-GYEDVPN-NENALKKAVAH-QPVSIAIEAGGRAFQLYESGVF-NGEC- 289

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
              LDH V+ VGYG+D+NG DYW+V+NSW   WG+ GYI+M RN
Sbjct: 290 GLALDHGVVAVGYGSDDNGQDYWIVRNSWGGNWGENGYIRMERN 333



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 4/68 (5%)

Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGV 224
           +  EC    LDH V+ VGYG+D+NG DYW+V+NSW   WG+ GYI+M RN   N   CG+
Sbjct: 285 FNGEC-GLALDHGVVAVGYGSDDNGQDYWIVRNSWGGNWGENGYIRMERNINANTGKCGI 343

Query: 225 ASSASFPL 232
           A  AS+P+
Sbjct: 344 AMEASYPV 351


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 34/172 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I  N G++TE  YPY                               T+G  N 
Sbjct: 168 MDYAFQFIMKNGGLNTEKDYPYHG-----------------------------TNGKCNS 198

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K ++   +D GY D+P  DE  LK AV +  PVS+AIDA  ++FQ Y  G+ +  +C 
Sbjct: 199 LLKNSRVVTID-GYEDVPSKDETALKRAV-SYQPVSVAIDAGGRAFQHYQSGI-FTGKC- 254

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
            T +DHAV+ VGYG+ ENG DYW+V+NSW T WG++GYI+M RN      +C
Sbjct: 255 GTNMDHAVVAVGYGS-ENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKC 305


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE+ YPY+A                      R +Q          
Sbjct: 206 MDYAFEFIIKNGGIDTEADYPYKAA-------------------DGRCDQ---------- 236

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK   +D  Y D+PE  E  LK A+A   P+S+AI+A  ++FQ YS GV+ +  C 
Sbjct: 237 NRKNAKVVTID-SYEDVPENSEASLKKALAH-QPISVAIEAGGRAFQLYSSGVF-DGLCG 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+LDH V+ VGYGT ENG DYW+V+NSW   WG+ GYIKMARN
Sbjct: 294 -TELDHGVVAVGYGT-ENGKDYWIVRNSWGNRWGESGYIKMARN 335



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 4/61 (6%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRE---NNCGVASSASFP 231
           T+LDH V+ VGYGT ENG DYW+V+NSW   WG+ GYIKMARN E     CG+A  AS+P
Sbjct: 294 TELDHGVVAVGYGT-ENGKDYWIVRNSWGNRWGESGYIKMARNIEAPTGKCGIAMEASYP 352

Query: 232 L 232
           +
Sbjct: 353 I 353


>gi|328870624|gb|EGG18997.1| cysteine proteinase [Dictyostelium fasciculatum]
          Length = 521

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 74/139 (53%), Gaps = 32/139 (23%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MDQAF YI  N GIDTESSYPY+A+                                  C
Sbjct: 188 MDQAFTYIIKNKGIDTESSYPYKAVQG-------------------------------KC 216

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
            +     GA   GY D+  G E  L+A  A  GPVS+AIDASH SFQ Y  GVYYEP+C+
Sbjct: 217 AFNPKNIGATLTGYTDVKSGSESDLEAK-ANTGPVSVAIDASHNSFQLYGSGVYYEPKCS 275

Query: 121 STQLDHAVLVVGYGTDENG 139
           +TQLDH VLVVGYG+   G
Sbjct: 276 ATQLDHGVLVVGYGSCTGG 294



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)

Query: 194 DYWLVKNSWNTTWGD-EGYIKMARNRENNCGVASSASFP 231
           +YW+VKNSW TTWG+  GYI M++NR NNCG+A+SAS P
Sbjct: 481 NYWIVKNSWGTTWGNLNGYIYMSKNRNNNCGIATSASIP 519



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 17/26 (65%), Positives = 22/26 (84%), Gaps = 1/26 (3%)

Query: 141 DYWLVKNSWNTTWGD-EGYIKMARNR 165
           +YW+VKNSW TTWG+  GYI M++NR
Sbjct: 481 NYWIVKNSWGTTWGNLNGYIYMSKNR 506


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 91/167 (54%), Gaps = 36/167 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I +N GIDT+  YPY+A+                               D  C
Sbjct: 206 MDNAFQFIINNGGIDTDKDYPYQAV-------------------------------DGKC 234

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              + K+ AV   G+ D+   DE  L+ AVA   PVS+AI+AS  + QFY  GV+   EC
Sbjct: 235 DTTKVKNKAVTIDGFEDVMAFDEMALQKAVAH-QPVSVAIEASGMALQFYQSGVF-TGEC 292

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRV 166
            S  LDH V++VGYGT E+G DYWLV+NSW   WG+ GYIKM RN V
Sbjct: 293 GSA-LDHGVVIVGYGT-EDGIDYWLVRNSWGRDWGENGYIKMQRNVV 337



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 6/69 (8%)

Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR----ENNCG 223
           +  EC S  LDH V++VGYGT E+G DYWLV+NSW   WG+ GYIKM RN        CG
Sbjct: 288 FTGECGSA-LDHGVVIVGYGT-EDGIDYWLVRNSWGRDWGENGYIKMQRNVVDTFTGKCG 345

Query: 224 VASSASFPL 232
           +A  +S+P+
Sbjct: 346 IAMESSYPI 354


>gi|62955235|ref|NP_001017633.1| uncharacterized protein LOC550326 precursor [Danio rerio]
 gi|62202194|gb|AAH92817.1| Zgc:110239 [Danio rerio]
          Length = 546

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 3/105 (2%)

Query: 60  CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           C Y ++   A   GY ++  GD   LKAA+   GPV+++IDA+H+SF FYS GVYYEPEC
Sbjct: 425 CHYDKSSMVAQLTGYTNVTSGDILALKAAIFKFGPVAVSIDAAHRSFAFYSNGVYYEPEC 484

Query: 120 NS--TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
            +    LDHAVL VGYG   N   YWLVKNSW++ WG++GYI M+
Sbjct: 485 KNGINDLDHAVLAVGYGI-MNNESYWLVKNSWSSYWGNDGYILMS 528


>gi|157093728|gb|ABV22590.1| KDEL-tailed cysteine endopeptidase [Solanum lycopersicum]
          Length = 360

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 86/165 (52%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +IK   GI TE  YPY+A                                DD C
Sbjct: 194 MDPAFDFIKKRGGITTEERYPYKAE-------------------------------DDKC 222

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
             ++  +  V   G+ D+P  DE  L  AVA   P+S+AIDAS   FQFYSEGV+   EC
Sbjct: 223 DIQKRNTPVVSIDGHEDVPPNDEDALLKAVAN-QPISVAIDASGSQFQFYSEGVF-TGEC 280

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             T+LDH V +VGYGT  +G  YW+VKNSW   WG++GYI+M R 
Sbjct: 281 -GTELDHGVAIVGYGTTVDGTKYWIVKNSWGAGWGEKGYIRMQRK 324



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 4/65 (6%)

Query: 171 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASS 227
           EC  T+LDH V +VGYGT  +G  YW+VKNSW   WG++GYI+M R     E  CG+A  
Sbjct: 279 EC-GTELDHGVAIVGYGTTVDGTKYWIVKNSWGAGWGEKGYIRMQRKVDAEEGLCGIAMQ 337

Query: 228 ASFPL 232
            S+P+
Sbjct: 338 PSYPI 342


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE  YPY+A                      R +Q          
Sbjct: 205 MDYAFEFIIKNGGIDTEEDYPYKAA-------------------DGRCDQTR-------- 237

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK   +D  Y D+PE +E  LK  +A   P+S+AI+A  ++FQ YS GV+ +  C 
Sbjct: 238 --KNAKVVTID-AYEDVPENNEAALKKTLAN-QPISVAIEAGGRAFQLYSSGVF-DGICG 292

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+LDH V+ VGYGT ENG DYW+V+NSW  +WG+ GYIKMARN
Sbjct: 293 -TELDHGVVAVGYGT-ENGKDYWIVRNSWGGSWGESGYIKMARN 334



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 4/61 (6%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V+ VGYGT ENG DYW+V+NSW  +WG+ GYIKMARN       CG+A  AS+P
Sbjct: 293 TELDHGVVAVGYGT-ENGKDYWIVRNSWGGSWGESGYIKMARNIAEPTGKCGIAMEASYP 351

Query: 232 L 232
           +
Sbjct: 352 I 352


>gi|357162587|ref|XP_003579458.1| PREDICTED: oryzain beta chain-like [Brachypodium distachyon]
          Length = 470

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 90/166 (54%), Gaps = 38/166 (22%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF +I +N GIDTE  YPY+A+                               D  C
Sbjct: 214 MDDAFDFIINNGGIDTEDDYPYKAL-------------------------------DGKC 242

Query: 61  RYKR--AKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
              R  AK  ++D G+ D+PE DE  L+ AVA   PVS+AI+A  + FQ Y  GV+    
Sbjct: 243 DINRRNAKVVSID-GFEDVPENDEKSLQKAVAHQ-PVSVAIEAGGREFQLYHSGVFT-GR 299

Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           C  T+LDH V+ VGYGT ENG DYW+V+NSW   WG+ GY++M RN
Sbjct: 300 C-GTELDHGVVAVGYGT-ENGKDYWIVRNSWGPKWGEAGYLRMERN 343


>gi|322787487|gb|EFZ13575.1| hypothetical protein SINV_11743 [Solenopsis invicta]
          Length = 552

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 73/109 (66%), Gaps = 3/109 (2%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C        A   G+V++P      LK A+A  GP+S+AIDASH++F FYS GVYY+
Sbjct: 429 DGYCHINNVTLTANITGFVNVPPRSVQALKIAIAKHGPISVAIDASHKTFSFYSHGVYYD 488

Query: 117 PECNSTQ--LDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
           P C +T+  LDHAVL VGYGT  NG  YWLVKNSW+  WG++GYI MA+
Sbjct: 489 PACGNTEDKLDHAVLAVGYGT-MNGKGYWLVKNSWSNYWGNDGYILMAQ 536


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 88/165 (53%), Gaps = 35/165 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I +N G+ TES+YPY+                                 D  C
Sbjct: 195 MDTAFEFIINNGGLTTESNYPYKGE-------------------------------DGTC 223

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
            + +    AV   GY D+P  DE  L  AVA   PVS+AI+A    FQFYS GV+   EC
Sbjct: 224 NFNKTNPIAVSITGYEDVPANDEQALMKAVAH-QPVSVAIEAGGSDFQFYSSGVF-TGEC 281

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
             T+LDHAV  VGYG  E+G+ YW+VKNSW T WG+ GYI+M ++
Sbjct: 282 G-TELDHAVTAVGYGESEDGSKYWIVKNSWGTKWGESGYIEMQKD 325


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 91/174 (52%), Gaps = 37/174 (21%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQ+I +N G+DTE  YPY                                  DD C
Sbjct: 185 MDYAFQFIINNGGLDTEKDYPY-------------------------------LGNDDTC 213

Query: 61  RYKRAKSGAVD-RGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
              + K+ AV   G+ D+   DE  L+ AVA   PVS+AI+AS  + QFY  GV+   EC
Sbjct: 214 DRDKMKTKAVSIDGFEDVLPFDEKALQKAVAH-QPVSVAIEASGMALQFYQSGVF-TGEC 271

Query: 120 NSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN-RVYYEPEC 172
             T LDH V+VVGYGT E G DYWLV+NSW T WG+ GYIKM RN R  Y   C
Sbjct: 272 -GTALDHGVVVVGYGT-EKGLDYWLVRNSWGTEWGEHGYIKMQRNVRDTYTGRC 323



 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 6/69 (8%)

Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN----CG 223
           +  EC  T LDH V+VVGYGT E G DYWLV+NSW T WG+ GYIKM RN  +     CG
Sbjct: 267 FTGEC-GTALDHGVVVVGYGT-EKGLDYWLVRNSWGTEWGEHGYIKMQRNVRDTYTGRCG 324

Query: 224 VASSASFPL 232
           +A  +S+P+
Sbjct: 325 IAMESSYPV 333


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 92/164 (56%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I  N GIDTE+ YPY+A                      R +Q          
Sbjct: 206 MDYAFEFIIKNGGIDTEADYPYKAA-------------------DGRCDQ---------- 236

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK   +D  Y D+PE  E  LK A+A   P+S+AI+A  ++FQ YS GV+ +  C 
Sbjct: 237 NRKNAKVVTID-SYEDVPENSEASLKKALAH-QPISVAIEAGGRAFQLYSSGVF-DGICG 293

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+LDH V+ VGYGT ENG DYW+V+NSW   WG+ GYIKMARN
Sbjct: 294 -TELDHGVVAVGYGT-ENGKDYWIVRNSWGNRWGESGYIKMARN 335



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 4/61 (6%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T+LDH V+ VGYGT ENG DYW+V+NSW   WG+ GYIKMARN       CG+A  AS+P
Sbjct: 294 TELDHGVVAVGYGT-ENGKDYWIVRNSWGNRWGESGYIKMARNIAEPTGKCGIAMEASYP 352

Query: 232 L 232
           +
Sbjct: 353 I 353


>gi|307141900|gb|ADN34745.1| putative cysteine peptidase [Echinococcus granulosus]
          Length = 218

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 32/165 (19%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M+ AF+Y   N G ++ES YPY AM                               D  C
Sbjct: 76  MNDAFRYWMQN-GAESESDYPYTAM-------------------------------DGKC 103

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           ++  +K       +V +P+  E +LK +VA +GPVS+AIDA+   F  Y +G+Y +  C+
Sbjct: 104 KFNSSKVVTKVSKFVKVPKKREDQLKLSVAQVGPVSVAIDAASSGFMLYKKGIYQDNTCS 163

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
              LDHAVLVVGY  D  G  YW+VKNSW   WG  GYI MAR++
Sbjct: 164 QQYLDHAVLVVGYDADMAGQKYWIVKNSWGEDWGQRGYIWMARDK 208


>gi|47229488|emb|CAF99476.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 478

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 92/163 (56%), Gaps = 35/163 (21%)

Query: 3   QAFQYIKDNHGIDTESSY-PYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCR 61
           +A+++I  + GI +  +Y PY  M  F               CH  S+++T         
Sbjct: 330 RAYEWIMKHGGIASAETYGPYLGMNGF---------------CHVNSSELT--------- 365

Query: 62  YKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNS 121
                  A  + Y ++  GD   LK A+   GPV+++IDASH+SF FYS GVYYEP C S
Sbjct: 366 -------AQIQSYTNVTSGDALALKLALFKNGPVAVSIDASHRSFVFYSNGVYYEPACGS 418

Query: 122 T--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
           T   LDHAVL VGYG + NG  YWL+KNSW+T WG++GYI M+
Sbjct: 419 TVEDLDHAVLAVGYG-NLNGEPYWLIKNSWSTYWGNDGYILMS 460


>gi|414591548|tpg|DAA42119.1| TPA: hypothetical protein ZEAMMB73_388689, partial [Zea mays]
          Length = 229

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 90/164 (54%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AFQYI+ N G+ TES+YPY A          +R C       +RS+ VT+       
Sbjct: 59  MDYAFQYIQRNGGVTTESNYPYLAE---------QRSC---NKAKERSHDVTID------ 100

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+P  +E  L+ AVA+  PV++AI+AS Q FQFYSEGV+    C 
Sbjct: 101 ------------GYEDVPANNEDALQKAVASQ-PVAVAIEASGQDFQFYSEGVF-TGSCG 146

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T LDH V  VGYGT  +G  YW VKNSW   WG+ GYI+M R 
Sbjct: 147 -TDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIRMQRG 189



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
           T LDH V  VGYGT  +G  YW VKNSW   WG+ GYI+M R   ++   CG+A   S+P
Sbjct: 147 TDLDHGVAAVGYGTTGDGTKYWTVKNSWGEDWGERGYIRMQRGVPDSRGLCGIAMEPSYP 206


>gi|224081608|ref|XP_002191568.1| PREDICTED: counting factor associated protein D-like [Taeniopygia
           guttata]
          Length = 546

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 76/105 (72%), Gaps = 3/105 (2%)

Query: 60  CRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPEC 119
           C Y +++  A   GYV++  G+   +K A+   GPV+++IDASH+SF FYS GVYYEP+C
Sbjct: 425 CHYNQSEMLAKITGYVNVTSGNITAVKTAIYKHGPVAVSIDASHKSFSFYSNGVYYEPKC 484

Query: 120 NST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
           ++T   LDHAVL VGYG  + G  YWL+KNSW+T WG++GYI MA
Sbjct: 485 DNTPGSLDHAVLAVGYGVLQ-GETYWLIKNSWSTYWGNDGYILMA 528


>gi|297279913|ref|XP_002801809.1| PREDICTED: cathepsin S-like [Macaca mulatta]
          Length = 255

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 2/109 (1%)

Query: 57  DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
           D  C+Y      A    Y ++P G E  LK  VA  GPVS+ +DASH SF  Y  GVYYE
Sbjct: 134 DQKCQYDSKYRAATCSKYTELPYGREDVLKEVVANKGPVSVGVDASHPSFFLYRSGVYYE 193

Query: 117 PECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           P C +  ++H VLVVGYG   NG +YWLVKNSW   +G+EGYI+MARN+
Sbjct: 194 PSC-TQNVNHGVLVVGYGV-LNGKEYWLVKNSWGRNFGEEGYIRMARNK 240


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I +N GIDTE  YPY+A  +               IC        V + D   
Sbjct: 206 MDYAFEFIINNGGIDTEEDYPYKASDN---------------ICDPNRKNAKVVTID--- 247

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
                       GY D+PE DE  LK AVA   PVS+AI+A  ++FQ Y  GV+    C 
Sbjct: 248 ------------GYEDVPENDENSLKKAVAH-QPVSVAIEAGGRAFQLYKSGVF-TGRC- 292

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T+LDH V+ VGYGT ENG +YW+V+NSW + WG+ GYI+M RN
Sbjct: 293 GTELDHGVVAVGYGT-ENGVNYWIVRNSWGSAWGESGYIRMERN 335


>gi|149039728|gb|EDL93844.1| rCG24133 [Rattus norvegicus]
          Length = 333

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A QY+K+N G+++E++YPYE                                 + +CRY 
Sbjct: 186 ALQYVKENGGLESEATYPYE-------------------------------EKEGSCRYH 214

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A    +  +P+ +E  L  AVAT+GP+S+AIDA H+SF FY  G+Y+EP C+S+ 
Sbjct: 215 PDNSTASITDFEFVPK-NEDALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCSSSV 273

Query: 124 LDHAVLVVGY---GTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
           + HA+L+VGY   G + +G  YW++KNS    WG+ GY+K+A+++
Sbjct: 274 VTHAMLLVGYGFVGEESDGRKYWILKNSMGNKWGNRGYMKIAKDQ 318


>gi|111036376|dbj|BAF02517.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 84/164 (51%), Gaps = 33/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           M  AF+Y+ + H I+ ES+YPY A                                D  C
Sbjct: 192 MSNAFKYL-EGHSIEPESAYPYRAT-------------------------------DGPC 219

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
           RY  +          DIPEG+E  L  AVAT+GP+SIAIDAS   F FY  G+Y    C+
Sbjct: 220 RYNESLGVGSVTDIGDIPEGNETALMEAVATVGPISIAIDASTLGFMFYHHGIYKSHWCS 279

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
           S  L+H VL +GYG   +G  YWLVKNSW + WG +GYI MA++
Sbjct: 280 SKFLNHGVLAIGYG-KLDGKPYWLVKNSWGSRWGMKGYIMMAKD 322


>gi|344250850|gb|EGW06954.1| Cathepsin R [Cricetulus griseus]
          Length = 279

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 35/165 (21%)

Query: 4   AFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNCRYK 63
           A++Y+  N G++ E++YPYE                                 +  CRY 
Sbjct: 132 AYEYVLHNGGVEAEATYPYEGK-------------------------------EGPCRYN 160

Query: 64  RAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQ 123
              S A   G+V +P+ +E  L AAVATIGP+S  ID +   F FY +G++Y+P+C++  
Sbjct: 161 PKYSAANITGFVSLPKSEE-SLMAAVATIGPISAGIDIASDFFMFYKKGIFYDPKCHNDT 219

Query: 124 LDHAVLVVGYGTDEN---GNDYWLVKNSWNTTWGDEGYIKMARNR 165
           ++H VLVVGYG + N   GN+YWLVKNS+   WG  GY+K+A+++
Sbjct: 220 VNHVVLVVGYGFEGNETDGNNYWLVKNSYGKKWGLRGYMKIAKDQ 264


>gi|414875906|tpg|DAA53037.1| TPA: hypothetical protein ZEAMMB73_586844 [Zea mays]
          Length = 1039

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 90/164 (54%), Gaps = 34/164 (20%)

Query: 1   MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
           MD AF++I +N GIDTE  YPY+                              T G  + 
Sbjct: 759 MDYAFEFIINNGGIDTEKDYPYKG-----------------------------TDGRCDV 789

Query: 61  RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
             K AK   +D  Y D+P  DE  L+ AVA   PVS+AI+A+  +FQ YS G++    C 
Sbjct: 790 NRKNAKVVTID-SYEDVPANDEKSLQKAVAN-QPVSVAIEAAGTTFQLYSSGIFTG-SCG 846

Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN 164
            T LDH V VVGYGT ENG DYW++KNSW ++WG+ GY++M RN
Sbjct: 847 -TALDHGVTVVGYGT-ENGKDYWIMKNSWGSSWGESGYVRMERN 888



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 4/61 (6%)

Query: 175 TQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN---RENNCGVASSASFP 231
           T LDH V VVGYGT ENG DYW++KNSW ++WG+ GY++M RN       CG+A   S+P
Sbjct: 847 TALDHGVTVVGYGT-ENGKDYWIMKNSWGSSWGESGYVRMERNIKASSGKCGIAVEPSYP 905

Query: 232 L 232
           L
Sbjct: 906 L 906


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,064,764,381
Number of Sequences: 23463169
Number of extensions: 177167039
Number of successful extensions: 382550
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5664
Number of HSP's successfully gapped in prelim test: 1494
Number of HSP's that attempted gapping in prelim test: 354577
Number of HSP's gapped (non-prelim): 17317
length of query: 233
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 95
effective length of database: 9,121,278,045
effective search space: 866521414275
effective search space used: 866521414275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)