RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy403
(233 letters)
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 112 bits (280), Expect = 3e-30
Identities = 62/178 (34%), Positives = 83/178 (46%), Gaps = 50/178 (28%)
Query: 56 GDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYY 115
+ K + E L AVAT+GP+S+AIDA H+SF FY EG+Y+
Sbjct: 189 ATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYF 248
Query: 116 EPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNST 175
EP+C+S +DH VLVVGYG +
Sbjct: 249 EPDCSSEDMDHGVLVVGYGFE--------------------------------------- 269
Query: 176 QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
T+ + N YWLVKNSW WG GY+KMA++R N+CG+AS+AS+P V
Sbjct: 270 -----------STESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 98.5 bits (244), Expect = 6e-26
Identities = 65/180 (36%), Positives = 93/180 (51%), Gaps = 50/180 (27%)
Query: 54 TSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGV 113
+ D+ C+Y+ S A D G+ + G E L AVAT+GP+S+A+DA H SFQFY G+
Sbjct: 92 VAVDEICKYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGI 151
Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECN 173
Y+EP+C+S LDH VLVVGYG +
Sbjct: 152 YFEPDCSSKNLDHGVLVVGYGFE------------------------------------- 174
Query: 174 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
G + + + YWLVKNSW WG GY+K+A+++ N+CG+A++AS+P V
Sbjct: 175 -------------GANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 221
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 96.2 bits (238), Expect = 9e-25
Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 3/165 (1%)
Query: 1 MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
+A+ + + + + + C + + +
Sbjct: 77 PAEAWNFWTRKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 136
Query: 61 RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
K E + A + GPV A + F Y G Y+
Sbjct: 137 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSV-YSDFLLYKSG-VYQHVTG 194
Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
HA+ ++G+G ENG YWLV NSWNT WGD G+ K+ R +
Sbjct: 195 EMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQ 238
Score = 86.5 bits (213), Expect = 4e-21
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 126 HAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVG 185
+ E + KN + Y+ HA+ ++G
Sbjct: 147 YGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILG 206
Query: 186 YGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASFPL 232
+G ENG YWLV NSWNT WGD G+ K+ R + ++CG+ S +
Sbjct: 207 WGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQ-DHCGIESEVVAGI 251
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 94.3 bits (233), Expect = 3e-24
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 61 RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
+ K V ++ + K G ++ A + S+ Y +
Sbjct: 37 QLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD 96
Query: 121 STQLDH----AVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYI------KMARNRVYYEP 170
A Y G + L + N G + R+ VYYEP
Sbjct: 97 QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP 156
Query: 171 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASSASF 230
C + ++H VLVVGYG D NG +YWLVKNSW +G+EGYI+MARN+ N+CG+AS S+
Sbjct: 157 SC-TQNVNHGVLVVGYG-DLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSY 214
Query: 231 PLV 233
P +
Sbjct: 215 PEI 217
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 93.5 bits (231), Expect = 5e-24
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 58 DNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEP 117
+ GY +P E A+A P+S+ ++A + FQ Y GV+ P
Sbjct: 94 KCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGP 152
Query: 118 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
+LDHAV VGYGT +G +Y ++KNSW WG++GY+++ R + C
Sbjct: 153 CGT--KLDHAVTAVGYGT-SDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTC 204
Score = 81.2 bits (199), Expect = 2e-19
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 171 ECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR---NRENNCGVASS 227
T+LDHAV VGYGT +G +Y ++KNSW WG++GY+++ R N + CGV S
Sbjct: 151 GPCGTKLDHAVTAVGYGT-SDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKS 209
Query: 228 ASFPL 232
+ +P
Sbjct: 210 SYYPF 214
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 94.7 bits (234), Expect = 7e-24
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 140 NDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVK 199
+ D + R + + HAV +VGY G DYW+V+
Sbjct: 208 LAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSN-AQGVDYWIVR 266
Query: 200 NSWNTTWGDEGYIKMARNRENNCGVASSASFPLV 233
NSW+T WGD GY A N + + ++
Sbjct: 267 NSWDTNWGDNGYGYFAANI-DLMMIEEYPYVVIL 299
Score = 83.9 bits (206), Expect = 7e-20
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 103 HQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMA 162
+F+ Y + + HAV +VGY G DYW+V+NSW+T WGD GY A
Sbjct: 224 LDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSN-AQGVDYWIVRNSWDTNWGDNGYGYFA 282
Query: 163 RNR 165
N
Sbjct: 283 ANI 285
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 88.9 bits (219), Expect = 3e-22
Identities = 52/114 (45%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 59 NCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPE 118
K G+ ++PE DE L AVA PVS+AIDA FQFYSEGV+
Sbjct: 98 CDVSKENAPAVSIDGHENVPENDENALLKAVANQ-PVSVAIDAGGSDFQFYSEGVFTG-- 154
Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
T+LDH V +VGYGT +G YW VKNSW WG++GYI+M R E C
Sbjct: 155 SCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLC 208
Score = 85.4 bits (210), Expect = 6e-21
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR---NRENNCG 223
T+LDH V +VGYGT +G YW VKNSW WG++GYI+M R ++E CG
Sbjct: 150 GVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCG 209
Query: 224 VASSASFPL 232
+A AS+P+
Sbjct: 210 IAMEASYPI 218
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 88.1 bits (217), Expect = 5e-22
Identities = 76/165 (46%), Positives = 95/165 (57%), Gaps = 32/165 (19%)
Query: 1 MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
M AFQY++ N GID+E +YPY ++C
Sbjct: 68 MTNAFQYVQKNRGIDSEDAYPYVGQE-------------------------------ESC 96
Query: 61 RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
Y A RGY +IPEG+E LK AVA +GPVS+AIDAS SFQFYS+GVYY+ CN
Sbjct: 97 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156
Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
S L+HAVL VGYG GN +W++KNSW WG++GYI MARN+
Sbjct: 157 SDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNK 200
Score = 87.0 bits (214), Expect = 1e-21
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVAS 226
YY+ CNS L+HAVL VGYG GN +W++KNSW WG++GYI MARN+ N CG+A+
Sbjct: 150 YYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIAN 208
Query: 227 SASFPLV 233
ASFP +
Sbjct: 209 LASFPKM 215
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 87.3 bits (215), Expect = 1e-21
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 56 GDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYY 115
G A+ V +E KL A +A GP+S+AI+A F +
Sbjct: 91 GHMQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPL 150
Query: 116 EPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
P C+ +DHAVL+VGYG + +W +KNSW T WG++GY + R
Sbjct: 151 RPLCSPWLIDHAVLLVGYGQ-RSDVPFWAIKNSWGTDWGEKGYYYLHRGS 199
Score = 84.2 bits (207), Expect = 1e-20
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVAS 226
P C+ +DHAVL+VGYG + +W +KNSW T WG++GY + R CGV +
Sbjct: 149 PLRPLCSPWLIDHAVLLVGYGQ-RSDVPFWAIKNSWGTDWGEKGYYYLHRG-SGACGVNT 206
Query: 227 SASFPLV 233
AS +V
Sbjct: 207 MASSAVV 213
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 87.8 bits (216), Expect = 2e-21
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 44 CHKRSNQVTVTSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASH 103
+ NQ + C R + Y + K+ A + GP+S I A+
Sbjct: 135 ECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPISCGIMATE 192
Query: 104 QSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
G Y ++T ++H V V G+G +G +YW+V+NSW WG+ G++++
Sbjct: 193 --RLANYTGGIYAEYQDTTYINHVVSVAGWGI-SDGTEYWIVRNSWGEPWGERGWLRIVT 249
Query: 164 NR 165
+
Sbjct: 250 ST 251
Score = 82.8 bits (203), Expect = 1e-19
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 12/143 (8%)
Query: 102 SHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGND--YWLVKNSWNTTWGDEGYI 159
EC++ + V YG+ + N +
Sbjct: 134 QECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATER 193
Query: 160 KMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARN-- 217
Y ++T ++H V V G+G +G +YW+V+NSW WG+ G++++ +
Sbjct: 194 LANYTGGIYAEYQDTTYINHVVSVAGWGI-SDGTEYWIVRNSWGEPWGERGWLRIVTSTY 252
Query: 218 -----RENNCGVASSASF--PLV 233
N + +F P+V
Sbjct: 253 KDGKGARYNLAIEEHCTFGDPIV 275
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 86.2 bits (212), Expect = 3e-21
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Query: 38 CYLLTICHKRSNQVTVTSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSI 97
+ L T + R S +E +K + GP+++
Sbjct: 83 DFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAV 142
Query: 98 AIDASHQSFQFYSEGVYYEP-----ECNSTQLDHAVLVVGYGTDE-NGNDYWLVKNSWNT 151
A + + G+Y+ +HAVL+VGYGTD +G DYW+VKNSW T
Sbjct: 143 AFEVYDDFLHYKK-GIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGT 201
Query: 152 TWGDEGYIKMARNR 165
WG+ GY ++ R
Sbjct: 202 GWGENGYFRIRRGT 215
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 84.6 bits (208), Expect = 2e-20
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 12/132 (9%)
Query: 114 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECN 173
CN + + Y + + ++ + A +
Sbjct: 109 DAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFLGPISISVAVSDDFAFYKEGIFDGEC 168
Query: 174 STQLDHAVLVVGYGTDEN---------GNDYWLVKNSWNTTWGDEGYIKMARNR---ENN 221
QL+HAV++VG+G E + Y+++KNSW WG+ G+I + +
Sbjct: 169 GDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRK 228
Query: 222 CGVASSASFPLV 233
CG+ + A PL+
Sbjct: 229 CGLGTDAFIPLI 240
Score = 78.1 bits (191), Expect = 4e-18
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 86 KAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDEN------- 138
K A+ +GP+SI++ F FY EG++ QL+HAV++VG+G E
Sbjct: 137 KEALRFLGPISISVAV-SDDFAFYKEGIF--DGECGDQLNHAVMLVGFGMKEIVNPLTKK 193
Query: 139 --GNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
+ Y+++KNSW WG+ G+I + + +C
Sbjct: 194 GEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKC 229
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 84.2 bits (207), Expect = 2e-20
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 161 MARNRVYYEPECNST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 218
M R +Y C+ T +++HAVL VGYG ENG YW+VKNSW WG GY + R +
Sbjct: 154 MYRKGIYSSTSCHKTPDKVNHAVLAVGYGE-ENGIPYWIVKNSWGPQWGMNGYFLIERGK 212
Query: 219 ENNCGVASSASFPL 232
N CG+A+ AS+P+
Sbjct: 213 -NMCGLAACASYPI 225
Score = 78.8 bits (193), Expect = 2e-18
Identities = 55/167 (32%), Positives = 77/167 (46%), Gaps = 35/167 (20%)
Query: 1 MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
QAF+YI+ N GI E +YPY+ D+C
Sbjct: 79 PSQAFEYIRYNKGIMGEDTYPYKGQD-------------------------------DHC 107
Query: 61 RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
+++ K+ A + +I DE + AVA PVS A + F Y +G+Y C+
Sbjct: 108 KFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEV-TNDFLMYRKGIYSSTSCH 166
Query: 121 ST--QLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
T +++HAVL VGYG ENG YW+VKNSW WG GY + R +
Sbjct: 167 KTPDKVNHAVLAVGYGE-ENGIPYWIVKNSWGPQWGMNGYFLIERGK 212
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 83.1 bits (204), Expect = 4e-20
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Query: 102 SHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKM 161
+ S+ + S P S A + ++
Sbjct: 85 TEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSW 144
Query: 162 ARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENN 221
C S QLDH VL+VGY D YW++KNSW T WG+EGYI++A+ N
Sbjct: 145 MTYTGGVMTSCVSEQLDHGVLLVGYN-DSAAVPYWIIKNSWTTQWGEEGYIRIAKGS-NQ 202
Query: 222 CGVASSASFPLV 233
C V AS +V
Sbjct: 203 CLVKEEASSAVV 214
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 80.4 bits (197), Expect = 3e-19
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 133 YGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENG 192
+ GN + + + + T++DHAV VGYG G
Sbjct: 113 VQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKS-GG 171
Query: 193 NDYWLVKNSWNTTWGDEGYIKMARNRENN---CGVASSASFP 231
Y L+KNSW T WG++GYI++ R N+ CG+ S+ +P
Sbjct: 172 KGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 213
Score = 78.1 bits (191), Expect = 3e-18
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 73 GYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVG 132
G + +E L A+A PVS+ +++ + FQ Y G++ P T++DHAV VG
Sbjct: 109 GVGRVQPNNEGNLLNAIA-KQPVSVVVESKGRPFQLYKGGIFEGPCG--TKVDHAVTAVG 165
Query: 133 YGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
YG G Y L+KNSW T WG++GYI++ R C
Sbjct: 166 YGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVC 204
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 80.4 bits (197), Expect = 3e-19
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 167 YYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR--ENNCGV 224
T +DHAV +VGYGT E G DYW+VKNSW+TTWG+EGY+++ RN CG+
Sbjct: 150 GIFTGPCGTAIDHAVTIVGYGT-EGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGI 208
Query: 225 ASSASFPL 232
A+ S+P+
Sbjct: 209 ATMPSYPV 216
Score = 77.7 bits (190), Expect = 4e-18
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 9/169 (5%)
Query: 3 QAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVT------VTSG 56
+ I I + + + + T+
Sbjct: 35 EGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQ 94
Query: 57 DDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYE 116
D C V + + T PVS+A+DA+ +F+ YS G++
Sbjct: 95 DGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTG 154
Query: 117 PECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR 165
P +DHAV +VGYGT E G DYW+VKNSW+TTWG+EGY+++ RN
Sbjct: 155 PCGT--AIDHAVTIVGYGT-EGGIDYWIVKNSWDTTWGEEGYMRILRNV 200
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 78.9 bits (193), Expect = 1e-18
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 1 MDQAFQYIKDNHGIDTESSYPYEAMMSFLPSFLFRRLCYLLTICHKRSNQVTVTSGDDNC 60
M+ AFQ+I +N GI++E +YPY C
Sbjct: 68 MNPAFQFIVNNGGINSEETYPYRGQD-------------------------------GIC 96
Query: 61 RYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVYYEPECN 120
Y ++P +E L+ AVA PVS+ +DA+ + FQ Y G++
Sbjct: 97 NSTVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFTG--SC 153
Query: 121 STQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
+ +HA+ VVGYGT EN D+W+VKNSW WG+ GYI+ RN + +C
Sbjct: 154 NISANHALTVVGYGT-ENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKC 204
Score = 78.1 bits (191), Expect = 3e-18
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 115 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWN---TTWGDEGYIKMARNRVYYEPE 171
+ CNST V + Y + N+ L K N + D R
Sbjct: 92 QDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTG 151
Query: 172 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR---ENNCGVASSA 228
+ +HA+ VVGYGT EN D+W+VKNSW WG+ GYI+ RN + CG+ A
Sbjct: 152 SCNISANHALTVVGYGT-ENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFA 210
Query: 229 SFPL 232
S+P+
Sbjct: 211 SYPV 214
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 77.3 bits (189), Expect = 4e-18
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 142 YWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNS 201
V +T D + + T+L+H V +VGY + YW+V+NS
Sbjct: 120 KQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNHGVTIVGYQAN-----YWIVRNS 174
Query: 202 WNTTWGDEGYIKMAR-NRENNCGVASSASFP 231
W WG++GYI+M R CG+A +P
Sbjct: 175 WGRYWGEKGYIRMLRVGGCGLCGIARLPYYP 205
Score = 71.2 bits (173), Expect = 9e-16
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 88 AVATIGPVSIAIDASHQSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKN 147
+ P ++AIDAS FQ YS G++ P +L+H V +VGY + YW+V+N
Sbjct: 121 QAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGT--KLNHGVTIVGYQAN-----YWIVRN 173
Query: 148 SWNTTWGDEGYIKMARN 164
SW WG++GYI+M R
Sbjct: 174 SWGRYWGEKGYIRMLRV 190
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 75.8 bits (185), Expect = 2e-17
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 108 FYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVY 167
+ V + ++ + V + + +
Sbjct: 87 YPYSAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSG 146
Query: 168 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNR---ENNCGV 224
T +H V++VGYGT +G +YW+V+NSW WG++GYI M RN CG+
Sbjct: 147 IFTGPCGTAQNHGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGI 205
Query: 225 ASSASFP 231
A S+P
Sbjct: 206 AQLPSYP 212
Score = 71.2 bits (173), Expect = 9e-16
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 55 SGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASHQSFQFYSEGVY 114
S G+ + +E L++AVA+ PVS+ ++A+ FQ YS G++
Sbjct: 90 SAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQ-PVSVTVEAAGAPFQHYSSGIF 148
Query: 115 YEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPEC 172
P + H V++VGYGT +G +YW+V+NSW WG++GYI M RN C
Sbjct: 149 TGPCGTAQN--HGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLC 203
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 72.8 bits (177), Expect = 3e-16
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 137 ENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYW 196
G + + N + + R ++DHAV VGYG + Y
Sbjct: 117 NEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN-----YI 171
Query: 197 LVKNSWNTTWGDEGYIKMAR---NRENNCGVASSASFPL 232
L+KNSW T WG+ GYI++ R N CG+ +S+ +P+
Sbjct: 172 LIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV 210
Score = 71.6 bits (174), Expect = 6e-16
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 44 CHKRSNQVTVTSGDDNCRYKRAKSGAVDRGYVDIPEGDEYKLKAAVATIGPVSIAIDASH 103
N CR + A V + PVS+ ++A+
Sbjct: 79 GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAG 138
Query: 104 QSFQFYSEGVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMAR 163
+ FQ Y G++ P N ++DHAV VGYG +Y L+KNSW T WG+ GYI++ R
Sbjct: 139 KDFQLYRGGIFVGPCGN--KVDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKR 191
Query: 164 NRVYYEPEC 172
C
Sbjct: 192 GTGNSYGVC 200
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 57.3 bits (138), Expect = 2e-10
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 122 TQLDHAVLVVGYGTDENGND--YWLVKNSWNTTWGDEGYIKM 161
+ + HA+L+ G DE + V+NSW G +G M
Sbjct: 370 SLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
Score = 57.3 bits (138), Expect = 2e-10
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 175 TQLDHAVLVVGYGTDENGND--YWLVKNSWNTTWGDEGYIKM 214
+ + HA+L+ G DE + V+NSW G +G M
Sbjct: 370 SLMTHAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 48.0 bits (114), Expect = 4e-07
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 121 STQLDHAVLVVGYGT--DENGN-DYWLVKNSWNTTWGDEGYIKM 161
+ + HA+ D++G W V+NSW G +GY+ M
Sbjct: 366 ESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCM 409
Score = 48.0 bits (114), Expect = 4e-07
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 174 STQLDHAVLVVGYGT--DENGN-DYWLVKNSWNTTWGDEGYIKM 214
+ + HA+ D++G W V+NSW G +GY+ M
Sbjct: 366 ESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCM 409
>d1t9fa_ b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10)
{Caenorhabditis elegans [TaxId: 6239]}
Length = 178
Score = 29.9 bits (67), Expect = 0.16
Identities = 15/109 (13%), Positives = 28/109 (25%), Gaps = 13/109 (11%)
Query: 130 VVGYGTDENGNDYWLVKNSWNTTWGDEGYIK-----------MARNRVYYEPECNSTQLD 178
V ++ N +W + + N IK + ++
Sbjct: 40 VTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQH 99
Query: 179 HAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGYIKMARNRENNCGVASS 227
V G + + D W V N E R+ ++ S
Sbjct: 100 QEVSAFGSEAESDTGDDWTVI--CNGDEWLESEQFKLRHAVTGSYLSLS 146
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId:
1280]}
Length = 173
Score = 26.8 bits (59), Expect = 1.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 119 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNT 151
N HA+ VVG NG + ++ N W+
Sbjct: 112 RNGMHAGHAMAVVGNAKLNNGQEVIIIWNPWDN 144
Score = 26.8 bits (59), Expect = 1.5
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 172 CNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNT 204
N HA+ VVG NG + ++ N W+
Sbjct: 112 RNGMHAGHAMAVVGNAKLNNGQEVIIIWNPWDN 144
>d1u14a_ c.51.4.3 (A:) Hypothetical protein YjjX {Salmonella
typhimurium [TaxId: 90371]}
Length = 169
Score = 25.8 bits (57), Expect = 3.5
Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 19/81 (23%)
Query: 152 TWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGNDYWLVKNSWNTTWGDEGY 211
+G E ARNRV + Q D V + G D++ W
Sbjct: 46 PFGSEETRAGARNRVDNARRLH-PQADFWVAIEA-GIDDDATFSW--------------- 88
Query: 212 IKMARNRENNCGVASSASFPL 232
+ + G A SA+ PL
Sbjct: 89 --VVIDNGVQRGEARSATLPL 107
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH)
{Escherichia coli [TaxId: 562]}
Length = 143
Score = 24.8 bits (53), Expect = 6.7
Identities = 11/100 (11%), Positives = 26/100 (26%), Gaps = 7/100 (7%)
Query: 134 GTDENGNDYWLVKNSWNTTWGDEGYIKMARNRVYYEPECNSTQLDHAVLVVGYGTDENGN 193
D + + + N+ + ++ MA N V+ + L +
Sbjct: 6 HADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLD 65
Query: 194 DYWLVKNSWNTT-------WGDEGYIKMARNRENNCGVAS 226
+ + + + +R N AS
Sbjct: 66 WLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAAS 105
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.133 0.421
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 910,513
Number of extensions: 41663
Number of successful extensions: 229
Number of sequences better than 10.0: 1
Number of HSP's gapped: 170
Number of HSP's successfully gapped: 53
Length of query: 233
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 151
Effective length of database: 1,281,736
Effective search space: 193542136
Effective search space used: 193542136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)