BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4032
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42026|NDUS7_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Bos taurus GN=NDUFS7 PE=1 SV=1
Length = 216
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 144 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQK 202
Query: 71 KVKRMKILQSWYRR 84
K+KR K L+ WYRR
Sbjct: 203 KIKREKRLRIWYRR 216
>sp|P0CB83|NDUS7_PONAB NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo abelii GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+
Sbjct: 141 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQR 199
Query: 71 KVKRMKILQSWYRR 84
K+KR + LQ WYRR
Sbjct: 200 KIKRERRLQIWYRR 213
>sp|Q0MQI0|NDUS7_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pan troglodytes GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+
Sbjct: 141 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQR 199
Query: 71 KVKRMKILQSWYRR 84
K+KR + LQ WYRR
Sbjct: 200 KIKRERRLQIWYRR 213
>sp|P0CB84|NDUS7_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Pongo pygmaeus GN=NDUFS7 PE=2 SV=1
Length = 213
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+
Sbjct: 141 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQR 199
Query: 71 KVKRMKILQSWYRR 84
K+KR + LQ WYRR
Sbjct: 200 KIKRERRLQIWYRR 213
>sp|Q0MQH9|NDUS7_GORGO NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS7 PE=2
SV=1
Length = 213
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+
Sbjct: 141 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQR 199
Query: 71 KVKRMKILQSWYRR 84
K+KR + LQ WYRR
Sbjct: 200 KIKRERRLQIWYRR 213
>sp|O75251|NDUS7_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Homo sapiens GN=NDUFS7 PE=1 SV=3
Length = 213
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIY+PGCPPTAEAL+YGILQLQ+
Sbjct: 141 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQR 199
Query: 71 KVKRMKILQSWYRR 84
K+KR + LQ WYRR
Sbjct: 200 KIKRERRLQIWYRR 213
>sp|Q9DC70|NDUS7_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Mus musculus GN=Ndufs7 PE=1 SV=1
Length = 224
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 152 MPEPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 210
Query: 71 KVKRMKILQSWYRR 84
K+KR + L+ WYRR
Sbjct: 211 KIKREQKLKIWYRR 224
>sp|A8XFG2|NDUS7_CAEBR Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis briggsae GN=nduf-7 PE=3
SV=1
Length = 199
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Query: 17 VISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMK 76
VISMG A NGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK+KR +
Sbjct: 133 VISMGSCA-NGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKKIKRKR 191
Query: 77 ILQSWYRR 84
Q WYRR
Sbjct: 192 EAQLWYRR 199
>sp|Q94360|NDUS7_CAEEL Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Caenorhabditis elegans GN=nduf-7 PE=3
SV=1
Length = 199
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 61/68 (89%), Gaps = 1/68 (1%)
Query: 17 VISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQKKVKRMK 76
VISMG A NGGGYYHY+YSV+RGCDR+IPVDIYVPGCPPTAEAL+YG+LQLQKK+KR +
Sbjct: 133 VISMGSCA-NGGGYYHYAYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQKKIKRKR 191
Query: 77 ILQSWYRR 84
Q WYRR
Sbjct: 192 EAQLWYRR 199
>sp|O47950|NDUS7_NEUCR NADH-ubiquinone oxidoreductase 19.3 kDa subunit, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=G17A4.170 PE=2 SV=1
Length = 226
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EALMYGI QLQ+
Sbjct: 154 MPDPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALMYGIFQLQR 212
Query: 71 KVKRMKILQSWYRR 84
K++ KI + WYR+
Sbjct: 213 KMRNTKITRMWYRK 226
>sp|Q42577|NDUS7_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Arabidopsis thaliana GN=At5g11770 PE=1
SV=1
Length = 218
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQK
Sbjct: 146 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQK 204
Query: 71 KVKRMKILQSWYRR 84
K+ R K W+ +
Sbjct: 205 KINRRKDFLHWWNK 218
>sp|P42027|NDUS7_BRAOL NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Brassica oleracea PE=2 SV=1
Length = 215
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQK
Sbjct: 143 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQK 201
Query: 71 KVKRMKILQSWYRR 84
K+ R K W+ +
Sbjct: 202 KINRRKDFLHWWNK 215
>sp|Q43844|NDUS7_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Solanum tuberosum PE=2 SV=1
Length = 213
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSY+VVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 141 MPEPRWVISMGSCA-NGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQK 199
Query: 71 KVKRMKILQSWYRR 84
K+ R K L W+ +
Sbjct: 200 KINRRKDLLMWWTQ 213
>sp|Q54NI6|NDUS7_DICDI NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
mitochondrial OS=Dictyostelium discoideum GN=ndufs7 PE=3
SV=1
Length = 178
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRIIPVD+Y+PGCPPTAEA +YGILQLQK
Sbjct: 106 MPNPRYVVSMGSCA-NGGGYYHYSYSVVRGCDRIIPVDVYIPGCPPTAEAFVYGILQLQK 164
Query: 71 KVKRMKILQSWYRR 84
K+ R + L +W+R+
Sbjct: 165 KIGREQNLLTWWRK 178
>sp|O21272|NDUS7_RECAM NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas
americana GN=NAD10 PE=3 SV=1
Length = 182
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG+LQLQK
Sbjct: 110 MSEPRWVVSMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQK 168
Query: 71 KVKRMKILQSWYRR 84
K+KR + W ++
Sbjct: 169 KIKRSRKTLYWLQK 182
>sp|Q2G5Y4|NUOB_NOVAD NADH-quinone oxidoreductase subunit B OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=nuoB PE=3 SV=1
Length = 181
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ+
Sbjct: 113 MSDPKYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVMQLQR 171
Query: 71 KVKRMKILQ 79
K++R L+
Sbjct: 172 KIRRAGTLE 180
>sp|A5VAL8|NUOB_SPHWW NADH-quinone oxidoreductase subunit B OS=Sphingomonas wittichii
(strain RW1 / DSM 6014 / JCM 10273) GN=nuoB PE=3 SV=1
Length = 187
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ+
Sbjct: 119 MSEPKYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIMQLQR 177
Query: 71 KVKRMKILQ 79
K++R+ L+
Sbjct: 178 KIRRIGTLE 186
>sp|Q2W3I5|NUOB_MAGSA NADH-quinone oxidoreductase subunit B OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=nuoB PE=3
SV=1
Length = 186
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPP+AEALMYGILQLQK
Sbjct: 118 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPSAEALMYGILQLQK 176
Query: 71 KVKR 74
K++R
Sbjct: 177 KIRR 180
>sp|A5IHW2|NUOB_LEGPC NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Corby) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKILQS 80
K++R +L++
Sbjct: 149 KIRRKPVLEA 158
>sp|Q5WT21|NUOB_LEGPL NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Lens) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKILQS 80
K++R +L++
Sbjct: 149 KIRRKPVLEA 158
>sp|Q5ZRT9|NUOB_LEGPH NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKILQS 80
K++R +L++
Sbjct: 149 KIRRKPVLEA 158
>sp|Q5X1A8|NUOB_LEGPA NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila
(strain Paris) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MPEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKILQS 80
K++R +L++
Sbjct: 149 KIRRKPVLEA 158
>sp|Q82TU4|NUOB_NITEU NADH-quinone oxidoreductase subunit B OS=Nitrosomonas europaea
(strain ATCC 19718 / NBRC 14298) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|A1K5A9|NUOB1_AZOSB NADH-quinone oxidoreductase subunit B 1 OS=Azoarcus sp. (strain
BH72) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q5P1E9|NUOB_AROAE NADH-quinone oxidoreductase subunit B OS=Aromatoleum aromaticum
(strain EbN1) GN=nuoB PE=3 SV=1
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q87EQ4|NUOB_XYLFT NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=nuoB PE=3 SV=2
Length = 184
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R K +
Sbjct: 175 KIWRTKTI 182
>sp|B2I785|NUOB_XYLF2 NADH-quinone oxidoreductase subunit B OS=Xylella fastidiosa (strain
M23) GN=nuoB PE=3 SV=1
Length = 184
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R K +
Sbjct: 175 KIWRTKTI 182
>sp|Q2RU39|NUOB_RHORT NADH-quinone oxidoreductase subunit B OS=Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255) GN=nuoB PE=3 SV=1
Length = 185
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPT+EAL+YG+LQLQK
Sbjct: 117 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGVLQLQK 175
Query: 71 KVKRMKIL 78
K+KR L
Sbjct: 176 KIKRTGAL 183
>sp|A3PIW9|NUOB1_RHOS1 NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides
(strain ATCC 17029 / ATH 2.4.9) GN=nuoB1 PE=3 SV=1
Length = 176
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 108 MPEPRYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 166
Query: 71 KVKR 74
K++R
Sbjct: 167 KIRR 170
>sp|Q3SEX7|NUOB_THIDA NADH-quinone oxidoreductase subunit B OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=nuoB PE=3 SV=1
Length = 158
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL++GI+QLQK
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIFGIIQLQK 148
Query: 71 KVKRMKIL 78
K++R +
Sbjct: 149 KIRRTNTI 156
>sp|B9KQW1|NUOB1_RHOSK NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides
(strain KD131 / KCTC 12085) GN=nuoB1 PE=3 SV=1
Length = 174
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 106 MPEPRYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 164
Query: 71 KVKR 74
K++R
Sbjct: 165 KIRR 168
>sp|Q3J3G0|NUOB1_RHOS4 NADH-quinone oxidoreductase subunit B 1 OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=nuoB1 PE=3 SV=1
Length = 174
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 106 MPEPRYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 164
Query: 71 KVKR 74
K++R
Sbjct: 165 KIRR 168
>sp|Q31HF9|NUOB_THICR NADH-quinone oxidoreductase subunit B OS=Thiomicrospira crunogena
(strain XCL-2) GN=nuoB PE=3 SV=1
Length = 158
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q28T75|NUOB_JANSC NADH-quinone oxidoreductase subunit B OS=Jannaschia sp. (strain
CCS1) GN=nuoB PE=3 SV=1
Length = 177
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 109 MPEPRYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 167
Query: 71 KVKR 74
K++R
Sbjct: 168 KIRR 171
>sp|A1B497|NUOB_PARDP NADH-quinone oxidoreductase subunit B OS=Paracoccus denitrificans
(strain Pd 1222) GN=nuoB PE=1 SV=1
Length = 175
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQ+
Sbjct: 107 MPEPRYVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQR 165
Query: 71 KVKRMKIL 78
+++R L
Sbjct: 166 RIRRTGTL 173
>sp|Q9ZDH2|NUOB_RICPR NADH-quinone oxidoreductase subunit B OS=Rickettsia prowazekii
(strain Madrid E) GN=nuoB PE=3 SV=1
Length = 174
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYH+SYSVVRGCDRI+PVD+YVPGCPPTAEAL+YG++QLQK
Sbjct: 100 MTEPKWVLSMGSCA-NGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQK 158
Query: 71 KVKR 74
K+KR
Sbjct: 159 KIKR 162
>sp|B3CSG9|NUOB_ORITI NADH-quinone oxidoreductase subunit B OS=Orientia tsutsugamushi
(strain Ikeda) GN=nuoB PE=3 SV=1
Length = 171
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCD+I+PVDIYVPGCPPT EAL+YGILQLQK
Sbjct: 101 MTEPKWVISMGSCA-NGGGYYHYSYSVVRGCDKIVPVDIYVPGCPPTPEALLYGILQLQK 159
Query: 71 KVKRMK 76
K+ R +
Sbjct: 160 KINRTQ 165
>sp|A5CES0|NUOB_ORITB NADH-quinone oxidoreductase subunit B OS=Orientia tsutsugamushi
(strain Boryong) GN=nuoB PE=3 SV=1
Length = 171
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCD+I+PVDIYVPGCPPT EAL+YGILQLQK
Sbjct: 101 MTEPKWVISMGSCA-NGGGYYHYSYSVVRGCDKIVPVDIYVPGCPPTPEALLYGILQLQK 159
Query: 71 KVKRMK 76
K+ R +
Sbjct: 160 KINRTQ 165
>sp|Q7NZI0|NUOB1_CHRVO NADH-quinone oxidoreductase subunit B 1 OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=nuoB1 PE=3 SV=1
Length = 158
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVD+YVPGCPPTAEAL+YGI+QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGIIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|C3PN71|NUOB_RICAE NADH-quinone oxidoreductase subunit B OS=Rickettsia africae (strain
ESF-5) GN=nuoB PE=3 SV=1
Length = 174
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYH+SYSVVRGCDRI+PVD+YVPGCPPTAEAL+YG++QLQK
Sbjct: 100 MTEPKWVLSMGSCA-NGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQK 158
Query: 71 KVKR 74
K+KR
Sbjct: 159 KIKR 162
>sp|Q473U2|NUOB_CUPPJ NADH-quinone oxidoreductase subunit B OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=nuoB PE=3 SV=1
Length = 160
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q1LPW2|NUOB_RALME NADH-quinone oxidoreductase subunit B OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nuoB PE=3 SV=1
Length = 160
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|B3R3W8|NUOB_CUPTR NADH-quinone oxidoreductase subunit B OS=Cupriavidus taiwanensis
(strain R1 / LMG 19424) GN=nuoB PE=3 SV=1
Length = 160
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q0KCS9|NUOB_CUPNH NADH-quinone oxidoreductase subunit B OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=nuoB PE=3 SV=1
Length = 160
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YG++QLQ
Sbjct: 90 MAEPRWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALIYGVIQLQN 148
Query: 71 KVKRMKIL 78
K+KR +
Sbjct: 149 KIKRTNTI 156
>sp|Q68X17|NUOB_RICTY NADH-quinone oxidoreductase subunit B OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=nuoB PE=3 SV=1
Length = 171
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 57/64 (89%), Gaps = 1/64 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P V+SMG A NGGGYYH+SYSVVRGCDRI+PVD+YVPGCPPTAEAL+YG++QLQK
Sbjct: 100 MTEPKWVLSMGSCA-NGGGYYHFSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGLMQLQK 158
Query: 71 KVKR 74
K+KR
Sbjct: 159 KIKR 162
>sp|B2SVL8|NUOB_XANOP NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv.
oryzae (strain PXO99A) GN=nuoB PE=3 SV=1
Length = 182
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 114 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQK 172
Query: 71 KVKRMKIL 78
K+ R + +
Sbjct: 173 KIWRTQTI 180
>sp|Q3BRN0|NUOB_XANC5 NADH-quinone oxidoreductase subunit B OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=nuoB PE=3 SV=1
Length = 184
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R + +
Sbjct: 175 KIWRTQTI 182
>sp|Q8PJ41|NUOB_XANAC NADH-quinone oxidoreductase subunit B OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=nuoB PE=3 SV=2
Length = 184
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R + +
Sbjct: 175 KIWRTQTI 182
>sp|Q5GXT2|NUOB_XANOR NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv.
oryzae (strain KACC10331 / KXO85) GN=nuoB PE=3 SV=2
Length = 184
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R + +
Sbjct: 175 KIWRTQTI 182
>sp|Q2P0V6|NUOB_XANOM NADH-quinone oxidoreductase subunit B OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=nuoB PE=3 SV=2
Length = 184
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 11 MLGPVGVISMGGAAPNGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAEALMYGILQLQK 70
M P VISMG A NGGGYYHYSYSVVRGCDRI+PVDIYVPGCPPTAEAL+YGILQLQK
Sbjct: 116 MPDPKWVISMGSCA-NGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALVYGILQLQK 174
Query: 71 KVKRMKIL 78
K+ R + +
Sbjct: 175 KIWRTQTI 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,653,485
Number of Sequences: 539616
Number of extensions: 1279281
Number of successful extensions: 5253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4066
Number of HSP's gapped (non-prelim): 696
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)