BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4035
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R1S3|PIGN_MOUSE GPI ethanolamine phosphate transferase 1 OS=Mus musculus GN=Pign
PE=2 SV=2
Length = 931
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 13/119 (10%)
Query: 5 IVLFF-----IHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQL---AKRVVIFFADGVRS 56
++LFF IH +FF SIF+IYF SP++ + Q L AKR+V+F ADG+R+
Sbjct: 1 MLLFFALGLLIHFVFFASIFDIYFTSPLVHGM----TPQFTPLPPPAKRLVLFVADGLRA 56
Query: 57 EKFYEVTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
+ YE+ + +S +P+IR ++ +E G++HT+VPTE+RPG +A++AGFYED SA+ K
Sbjct: 57 DTLYELDEDGNSRAPFIRNVII-HEGSWGVSHTRVPTESRPGHVALIAGFYEDVSAVAK 114
>sp|O95427|PIGN_HUMAN GPI ethanolamine phosphate transferase 1 OS=Homo sapiens GN=PIGN
PE=1 SV=1
Length = 931
Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/115 (44%), Positives = 78/115 (67%), Gaps = 8/115 (6%)
Query: 4 FIVLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQL---AKRVVIFFADGVRSEKFY 60
F + IH +FF SIF+IYF SP++ + Q L A+R+V+F ADG+R++ Y
Sbjct: 5 FTLGLLIHFVFFASIFDIYFTSPLVHGM----TPQFTPLPPPARRLVLFVADGLRADALY 60
Query: 61 EVTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
E+ + +S +P+IR ++ +E GI+HT+VPTE+RPG +A++AGFYED SA+ K
Sbjct: 61 ELDENGNSRAPFIRNIIM-HEGSWGISHTRVPTESRPGHVALIAGFYEDVSAVAK 114
>sp|Q6FJ81|MCD4_CANGA GPI ethanolamine phosphate transferase 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=MCD4 PE=3 SV=1
Length = 921
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 9/115 (7%)
Query: 6 VLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE---- 61
VLF H+L+ SIF+IYF SP++ + + AKR+ + DG+R++ ++
Sbjct: 14 VLF--HLLYLWSIFDIYFISPLVHGMEQKISTNNPP-AKRLFLIVGDGLRADTTFDKITH 70
Query: 62 -VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
VT + +P+IR+L+ NN A GI+HT++PTE+RPG +AM+AGFYED SA+ K
Sbjct: 71 PVTKKADYLAPFIRSLVQNN-ATYGISHTRMPTESRPGHVAMIAGFYEDVSAVTK 124
>sp|Q6CW36|MCD4_KLULA GPI ethanolamine phosphate transferase 1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=MCD4 PE=3 SV=1
Length = 919
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 9/115 (7%)
Query: 6 VLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE---- 61
VLF H+ + SIF+IYF SP++ + ++ AKR+ + DG+R++ ++
Sbjct: 14 VLF--HLFYLWSIFDIYFVSPLVHGMKQH-QSTDEAPAKRLFLIVGDGLRADTTFDKILH 70
Query: 62 -VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
VT + +PYIR L+ NEA G++HT++PTE+RPG +AM+AGFYED SA+ K
Sbjct: 71 PVTGEHDYLAPYIRDLV-RNEATYGVSHTRMPTESRPGHVAMIAGFYEDVSAVTK 124
>sp|Q757X5|MCD4_ASHGO GPI ethanolamine phosphate transferase 1 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=MCD4 PE=3 SV=2
Length = 925
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 74/116 (63%), Gaps = 7/116 (6%)
Query: 5 IVLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE--- 61
+V H+ + SIF+IYF SP++ + K+ AKR+ + DG+R++ ++
Sbjct: 11 LVGLLFHLFYLRSIFDIYFVSPLVHGMR-QFKSNEEPPAKRLFLIVGDGLRADTSFDKVK 69
Query: 62 --VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
VT + +PY+R+L+ +N A GI+HT++PTE+RPG +AM+AGFYED SA+ K
Sbjct: 70 HPVTGKTEFLAPYLRSLVEHN-ATYGISHTRMPTESRPGHVAMIAGFYEDVSAVTK 124
>sp|P36051|MCD4_YEAST GPI ethanolamine phosphate transferase 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MCD4 PE=1
SV=1
Length = 919
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Query: 6 VLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE---- 61
VLF H+ + SIF+IYF SP++ + ++ AKR+ + DG+R++ ++
Sbjct: 14 VLF--HLFYLWSIFDIYFISPLVHGMS-PYQSTPTPPAKRLFLIVGDGLRADTTFDKVTH 70
Query: 62 -VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFKLCSS 119
V+ + +P+IR+L+ NN A GI+HT++PTE+RPG +AM+AGFYED SA+ K S
Sbjct: 71 PVSGKTEFLAPFIRSLVMNN-ATYGISHTRMPTESRPGHVAMIAGFYEDVSAVTKGWKS 128
>sp|Q6BWE3|MCD4_DEBHA GPI ethanolamine phosphate transferase 1 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=MCD4 PE=3 SV=2
Length = 990
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 75/118 (63%), Gaps = 8/118 (6%)
Query: 3 VFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYEV 62
+FI L F H + SIF+IYF SP++ + + K+ AKR+ + DG+R++K ++
Sbjct: 9 LFIGLAF-HFFYLWSIFDIYFVSPLVHGMD-NHKSTDTPPAKRLFLIVGDGLRADKTFQK 66
Query: 63 -----TDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
T +PY+R+L A NE GI++T++PTE+RPG +AM+AGFYED SA+ K
Sbjct: 67 LKHPRTGETKYLAPYLRSL-ALNEGTWGISNTRMPTESRPGHVAMIAGFYEDVSAVTK 123
>sp|Q8WZK2|MCD4_SCHPO GPI ethanolamine phosphate transferase 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=its8 PE=1 SV=1
Length = 935
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 9/111 (8%)
Query: 11 HVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE------VTD 64
HV+F SIF+IYF +P+I + + G AKR+ + DG+R +K + + +
Sbjct: 13 HVVFLKSIFDIYFVTPLIHGM--KQYSAGEAPAKRLFLIVGDGLRPDKLLQPHSEKVIGE 70
Query: 65 RNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
+ +P++R+++ NN G++HT+VPTE+RPG +A++AGFYED SA+ K
Sbjct: 71 EQTYAAPFLRSIIQNN-GTFGVSHTRVPTESRPGHVALIAGFYEDVSAVTK 120
>sp|Q5A3M6|MCD4_CANAL GPI ethanolamine phosphate transferase 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=MCD4 PE=3 SV=1
Length = 971
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 9/115 (7%)
Query: 6 VLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYEV--- 62
VLF H + SIF+IYF SP++ + K+ AKR+ + DG+R++K ++
Sbjct: 13 VLF--HFFYLWSIFDIYFVSPLVHGMDHH-KSTWTPPAKRLFLIVGDGLRADKTFQKLTH 69
Query: 63 --TDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
T +PY+R+L NN GI++T++PTE+RPG +AM+AGFYED SA+ K
Sbjct: 70 PRTGEEKYLAPYLRSLALNN-GTWGISNTRMPTESRPGHVAMIAGFYEDVSAVTK 123
>sp|Q6C0Z3|MCD4_YARLI GPI ethanolamine phosphate transferase 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=MCD4 PE=3 SV=1
Length = 932
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
Query: 3 VFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQLAKRVVIFFADGVRSEKFYE- 61
V +V HV F SIF+IYF SP+I + ++ AKR+ + DG+R++K +E
Sbjct: 9 VLLVGVIFHVAFMWSIFDIYFVSPLIHGMKHH-QSTATPPAKRLFLIVGDGLRADKAFEK 67
Query: 62 ----VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAIFK 115
T + +P++R+ + + +A GI+HT++PTE+RPG +A++AGFYED SA+ K
Sbjct: 68 VRHPTTGESEYLAPFLRSKVMS-DATFGISHTRMPTESRPGHVALIAGFYEDVSAVTK 124
>sp|Q5AXD1|MCD4_EMENI GPI ethanolamine phosphate transferase 1 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=mcd4 PE=3 SV=1
Length = 930
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 78/117 (66%), Gaps = 15/117 (12%)
Query: 11 HVLFFLSIFEIYFKSPIIDNI-PVSVKAQ-GIQL-AKRVVIFFADGVRSEKFYEVT---- 63
H+++ SIF+IYF SPI+ + P V+ + G + AKR+V+F ADG+R++K +E+T
Sbjct: 17 HLIYAYSIFDIYFVSPIVSGMRPFRVEREPGSEAPAKRLVLFVADGLRADKAFELTPDPD 76
Query: 64 -------DRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAI 113
D + +P+IR+ + ++ GI+HT+VPTE+RPG +A++AG YED SA+
Sbjct: 77 LPEESNGDDLTFLAPFIRSRVLSH-GTFGISHTRVPTESRPGHVALIAGLYEDVSAV 132
>sp|Q2U0S9|MCD4_ASPOR GPI ethanolamine phosphate transferase 1 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=mcd4 PE=3 SV=1
Length = 1022
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 15/117 (12%)
Query: 11 HVLFFLSIFEIYFKSPIIDNI---PVSVKAQGIQLAKRVVIFFADGVRSEKFYEV----- 62
H+++ SIF+IYF SPI+ + V +A AKR+V+F ADG+R++K ++
Sbjct: 17 HLMYAYSIFDIYFVSPIVSGMRSFGVEREASAEAPAKRLVLFVADGLRADKAFQALPDPD 76
Query: 63 ------TDRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAI 113
D +P+IR+ A + GI+HT+VPTE+RPG +A++AG YED SA+
Sbjct: 77 APSDLENDEPIYLAPFIRSR-ALSHGTFGISHTRVPTESRPGHVALIAGLYEDVSAV 132
>sp|Q4ILH3|MCD4_GIBZE GPI ethanolamine phosphate transferase 1 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCD4
PE=3 SV=1
Length = 981
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 23/121 (19%)
Query: 11 HVLFFLSIFEIYFKSPIIDNIPV--------SVKAQGIQLAKRVVIFFADGVRSEKFYEV 62
H+++ LSIF+IYF SPI+ + + S KA A R+V+F DG+R++K ++
Sbjct: 17 HLVYILSIFDIYFVSPIVTGMKLFGVERPHESPKAP----ADRLVLFVGDGLRADKAFQA 72
Query: 63 ---------TDRNSSH-SPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSA 112
D H +PY+R+ + + G++HT+VPTE+RPG +A++AG YED SA
Sbjct: 73 HPEPYPESDQDLVPRHLAPYLRSRVLEH-GTFGVSHTRVPTESRPGHVALIAGLYEDVSA 131
Query: 113 I 113
+
Sbjct: 132 V 132
>sp|Q4W9R7|MCD4_ASPFU GPI ethanolamine phosphate transferase 1 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=mcd4 PE=2 SV=1
Length = 1032
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 25/123 (20%)
Query: 11 HVLFFLSIFEIYFKSPIIDNIPVSVKAQGIQL-------AKRVVIFFADGVRSEKFYEVT 63
H+++ SIF+IYF SPI+ + ++ G++ A R+V+F ADG+R++K ++
Sbjct: 17 HLIYAYSIFDIYFVSPIVSGM----RSYGVEREPGAKAPASRLVLFVADGLRADKAFQPA 72
Query: 64 DRNSSH-------------SPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDP 110
S +P+IR+ + ++ G++HT+VPTE+RPG +A++AG YED
Sbjct: 73 PDPSPEDGEDAENNDPIYLAPFIRSRVLSH-GTFGVSHTRVPTESRPGHVALIAGLYEDV 131
Query: 111 SAI 113
SA+
Sbjct: 132 SAV 134
>sp|Q7SAP1|MCD4_NEUCR GPI ethanolamine phosphate transferase 1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=mcd-4 PE=3 SV=1
Length = 996
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 66/116 (56%), Gaps = 14/116 (12%)
Query: 11 HVLFFLSIFEIYFKSPIIDNIP---VSVKAQGIQLAKRVVIFFADGVRSEKF-------Y 60
H + SIF+IYF SPI + V A R+V+F DG+R++K Y
Sbjct: 17 HFAYIFSIFDIYFVSPIETGMRLFNVQRPPNRSAPADRLVLFVGDGLRADKALQSHPEPY 76
Query: 61 EVTDRNSSH---SPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAI 113
+D + + +PY+R+ + + G++HT+VPTE+RPG +A++AG YED SA+
Sbjct: 77 PKSDADLTPRPLAPYLRSKILE-QGTFGVSHTRVPTESRPGHVALIAGLYEDVSAV 131
>sp|Q99MV1|TDRD1_MOUSE Tudor domain-containing protein 1 OS=Mus musculus GN=Tdrd1 PE=1
SV=2
Length = 1172
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 62 VTDRNSSHSPYIRTLLANNEACGGIAHTQVPTE 94
VTDRN+ P + TL +E CG +AH Q P +
Sbjct: 472 VTDRNAL-IPKVLTLNVGDEFCGVVAHIQTPED 503
>sp|Q71KQ7|PSBH_COLOB Photosystem II reaction center protein H OS=Coleochaete
orbicularis GN=psbH PE=3 SV=3
Length = 79
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M VFI LF + F + I E+Y S ++D IPVS
Sbjct: 43 MGVFIALFAV---FLVIILELYNASVLLDGIPVS 73
>sp|Q2H0X9|MCD4_CHAGB GPI ethanolamine phosphate transferase 1 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=MCD4 PE=3 SV=1
Length = 921
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 96 RPGAIAMLAGFYEDPSAI 113
RPG +A++AG YED SA+
Sbjct: 36 RPGHVALIAGLYEDVSAV 53
>sp|Q1KVV3|PSBH_SCEOB Photosystem II reaction center protein H OS=Scenedesmus obliquus
GN=psbH PE=3 SV=1
Length = 86
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M VFIVLF + F L I EIY S ++D++ +S
Sbjct: 50 MGVFIVLFAV---FLLIILEIYNSSLLLDDVTMS 80
>sp|Q0P3N4|PSBH_OSTTA Photosystem II reaction center protein H OS=Ostreococcus tauri
GN=psbH PE=3 SV=1
Length = 78
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M+VFI LF + ++ L EIY KS I+DN+ V+
Sbjct: 41 MSVFIGLFAVFIVILL---EIYNKSLILDNVGVN 71
>sp|Q8M9Z3|PSBH_CHAGL Photosystem II reaction center protein H OS=Chaetosphaeridium
globosum GN=psbH PE=3 SV=3
Length = 74
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M VF+ LF + F + I EIY S ++D IPVS
Sbjct: 43 MGVFMALFAV---FLVIILEIYNSSVLLDGIPVS 73
>sp|Q9ZJX9|RNR_HELPJ Ribonuclease R OS=Helicobacter pylori (strain J99) GN=rnr PE=3 SV=1
Length = 644
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 14 FFLSIFEIYFKSPIIDNIPVSVKAQGIQLA------KRVVIFF 50
FF+S+ + Y K P+I N+P S K + L KR + FF
Sbjct: 58 FFISLAKNYPKDPLIKNLPPSFKTDALILCQIECSKKRPIAFF 100
>sp|P56123|RNR_HELPY Ribonuclease R OS=Helicobacter pylori (strain ATCC 700392 / 26695)
GN=rnr PE=3 SV=1
Length = 644
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 14 FFLSIFEIYFKSPIIDNIPVSVKAQGIQLA------KRVVIFF 50
FF+S+ + Y K P+I N+P S K + L KR + FF
Sbjct: 58 FFISLAKNYPKDPLIKNLPPSFKTDALILCQIECSKKRPIAFF 100
>sp|Q32RU4|PSBH_STAPU Photosystem II reaction center protein H OS=Staurastrum
punctulatum GN=psbH PE=3 SV=1
Length = 74
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M VF+ LF + F + I E+Y S ++D IPVS
Sbjct: 42 MGVFMALFAV---FLVIILELYNASVVLDGIPVS 72
>sp|Q71KP6|PSBH_SPIMX Photosystem II reaction center protein H OS=Spirogyra maxima
GN=psbH PE=3 SV=3
Length = 78
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 1 MNVFIVLFFIHVLFFLSIFEIYFKSPIIDNIPVS 34
M VF+ LF + F + I EIY S ++D IPVS
Sbjct: 43 MGVFMALFAV---FLVIILEIYNASVLLDGIPVS 73
>sp|P78527|PRKDC_HUMAN DNA-dependent protein kinase catalytic subunit OS=Homo sapiens
GN=PRKDC PE=1 SV=3
Length = 4128
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 6 VLFFIHVLFFLSIFEIYFKSPIIDNIPVSVKA--QGIQLAKRVVIFFADGVRSEKFYEVT 63
V+ F H +F S+F + ++ N+ ++V Q ++V +G+ + F E
Sbjct: 1550 VIHFSHGEYFYSLFSETINTELLKNLDLAVLELMQSSVDNTKMVSAVLNGMLDQSFRERA 1609
Query: 64 DRNSSHSPYIRTLLANNEACGGIAHTQVPTETRPGAIAMLAGFYEDPSAI 113
++ T+L + + C P ET+ +A+LA + S++
Sbjct: 1610 NQKHQGLKLATTILQHWKKCDSWWAKDSPLETKMAVLALLAKILQIDSSV 1659
>sp|Q10G40|EXB12_ORYSJ Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2
Length = 313
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 63 TDRNSSHSPYI-----------RTLLANNEACGGIAHTQVPTETRPGA 99
+ R ++ SPYI R + A NEAC GI T V T+ PG
Sbjct: 72 SSRIAAGSPYIYDSGKGCGSCYRVVCAGNEACSGIPVTVVITDQGPGG 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.142 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,929,502
Number of Sequences: 539616
Number of extensions: 1446380
Number of successful extensions: 4215
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 4160
Number of HSP's gapped (non-prelim): 45
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)