Query psy4039
Match_columns 588
No_of_seqs 486 out of 2684
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 23:47:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4039.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4039hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4158|consensus 100.0 3.6E-66 7.9E-71 519.6 24.3 522 1-582 1-597 (598)
2 KOG0615|consensus 100.0 1.5E-52 3.2E-57 424.2 17.4 263 196-521 172-444 (475)
3 KOG0581|consensus 100.0 1.9E-50 4.2E-55 406.4 18.9 270 190-534 73-355 (364)
4 KOG0575|consensus 100.0 6E-50 1.3E-54 423.7 21.9 251 196-518 18-273 (592)
5 KOG0603|consensus 100.0 3.8E-50 8.2E-55 427.5 17.2 333 60-517 217-566 (612)
6 KOG0595|consensus 100.0 4.8E-48 1E-52 392.0 20.1 250 195-504 9-267 (429)
7 KOG0192|consensus 100.0 2.6E-47 5.6E-52 399.7 22.5 263 188-510 33-304 (362)
8 KOG0598|consensus 100.0 1.2E-47 2.5E-52 386.2 18.7 255 192-518 21-285 (357)
9 KOG0592|consensus 100.0 1.8E-47 3.9E-52 398.7 20.7 261 192-518 69-342 (604)
10 KOG0616|consensus 100.0 1E-45 2.2E-50 360.7 19.4 251 193-518 41-301 (355)
11 KOG0583|consensus 100.0 3.8E-45 8.2E-50 386.2 23.7 260 193-519 14-280 (370)
12 KOG0661|consensus 100.0 2E-46 4.4E-51 385.5 12.2 257 195-522 9-299 (538)
13 KOG0588|consensus 100.0 1.9E-45 4E-50 390.6 19.7 254 195-520 11-269 (786)
14 KOG0593|consensus 100.0 5.5E-46 1.2E-50 363.2 14.1 252 196-518 2-288 (396)
15 KOG0591|consensus 100.0 4.2E-47 9.1E-52 367.7 5.7 252 192-504 15-280 (375)
16 KOG0600|consensus 100.0 3.1E-45 6.7E-50 379.2 18.5 262 189-518 110-404 (560)
17 KOG0197|consensus 100.0 4.6E-45 9.9E-50 383.0 19.0 258 188-510 198-462 (468)
18 KOG0585|consensus 100.0 2E-45 4.3E-50 377.6 15.2 280 188-519 89-377 (576)
19 KOG0198|consensus 100.0 4.6E-45 9.9E-50 372.6 17.8 259 196-522 17-284 (313)
20 KOG0599|consensus 100.0 1.6E-45 3.5E-50 355.0 11.6 260 196-518 17-287 (411)
21 KOG0605|consensus 100.0 1.4E-44 2.9E-49 377.6 19.0 259 192-518 137-449 (550)
22 KOG0582|consensus 100.0 7.3E-44 1.6E-48 364.2 22.7 267 188-522 18-301 (516)
23 KOG0578|consensus 100.0 1.4E-44 3E-49 380.2 16.8 251 196-522 273-531 (550)
24 KOG0033|consensus 100.0 8.9E-46 1.9E-50 352.1 7.0 252 196-518 11-271 (355)
25 KOG0580|consensus 100.0 8.7E-45 1.9E-49 345.1 11.6 259 188-519 14-278 (281)
26 KOG0659|consensus 100.0 9.7E-44 2.1E-48 342.4 18.5 253 196-519 2-286 (318)
27 KOG0597|consensus 100.0 1.9E-44 4.2E-49 375.9 13.7 250 196-518 2-255 (808)
28 PTZ00263 protein kinase A cata 100.0 2.1E-43 4.6E-48 369.6 21.5 257 188-519 10-276 (329)
29 KOG0663|consensus 100.0 8.7E-44 1.9E-48 351.9 16.8 268 193-529 73-377 (419)
30 KOG4721|consensus 100.0 9.5E-44 2.1E-48 370.3 16.5 248 188-509 116-368 (904)
31 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-42 3.2E-47 355.9 23.3 252 194-517 3-288 (288)
32 KOG0032|consensus 100.0 1.3E-42 2.8E-47 367.1 23.5 256 196-520 35-299 (382)
33 KOG0660|consensus 100.0 2.1E-43 4.4E-48 354.3 16.4 258 196-518 22-314 (359)
34 cd05612 STKc_PRKX_like Catalyt 100.0 3.9E-43 8.5E-48 360.9 19.0 249 196-519 1-259 (291)
35 KOG0611|consensus 100.0 1.2E-43 2.7E-48 357.1 14.7 277 196-544 53-348 (668)
36 KOG0193|consensus 100.0 2.3E-43 4.9E-48 372.0 16.9 265 187-511 383-655 (678)
37 KOG0694|consensus 100.0 3.4E-43 7.3E-48 376.2 18.1 256 191-518 363-628 (694)
38 cd07862 STKc_CDK6 Catalytic do 100.0 2.2E-42 4.9E-47 353.9 22.9 257 196-517 1-290 (290)
39 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.8E-42 3.9E-47 357.7 22.3 256 196-523 5-297 (303)
40 PTZ00426 cAMP-dependent protei 100.0 1.3E-42 2.9E-47 365.5 20.9 257 188-519 22-289 (340)
41 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-42 4.5E-47 362.8 22.2 260 191-510 2-335 (338)
42 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.3E-42 9.4E-47 359.5 23.5 260 197-519 1-295 (338)
43 cd07848 STKc_CDKL5 Catalytic d 100.0 5.3E-42 1.1E-46 350.6 23.2 251 196-517 1-287 (287)
44 cd05631 STKc_GRK4 Catalytic do 100.0 4.8E-42 1E-46 351.6 22.7 251 197-519 1-266 (285)
45 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-42 4.7E-47 360.9 19.4 246 202-519 1-256 (323)
46 PTZ00036 glycogen synthase kin 100.0 5.3E-42 1.1E-46 373.0 21.8 255 195-518 65-355 (440)
47 KOG0658|consensus 100.0 1.7E-42 3.6E-47 348.3 16.1 251 196-518 24-310 (364)
48 KOG1187|consensus 100.0 5E-42 1.1E-46 361.7 20.4 247 196-507 75-350 (361)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-41 4E-46 355.1 23.7 265 193-533 2-320 (331)
50 cd05614 STKc_MSK2_N N-terminal 100.0 1.9E-41 4E-46 354.9 23.1 255 197-519 1-272 (332)
51 KOG0201|consensus 100.0 6.1E-43 1.3E-47 357.3 11.1 253 196-522 13-271 (467)
52 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-41 2.6E-46 353.5 20.6 245 204-520 1-253 (312)
53 PHA02988 hypothetical protein; 100.0 2.7E-41 5.8E-46 346.3 22.5 258 192-509 14-279 (283)
54 PHA03212 serine/threonine kina 100.0 1.8E-41 3.8E-46 363.5 22.0 247 193-519 89-381 (391)
55 cd05596 STKc_ROCK Catalytic do 100.0 1.7E-41 3.7E-46 361.1 21.5 261 191-519 38-309 (370)
56 cd05599 STKc_NDR_like Catalyti 100.0 1.8E-41 3.8E-46 359.5 21.2 256 196-519 1-301 (364)
57 cd05628 STKc_NDR1 Catalytic do 100.0 2.3E-41 4.9E-46 359.0 21.8 258 196-520 1-299 (363)
58 cd07863 STKc_CDK4 Catalytic do 100.0 7.5E-41 1.6E-45 342.0 24.7 256 197-517 1-288 (288)
59 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-41 5.6E-46 354.1 21.8 249 196-519 1-262 (333)
60 cd05593 STKc_PKB_gamma Catalyt 100.0 2.2E-41 4.7E-46 354.3 20.8 246 202-519 1-256 (328)
61 cd07876 STKc_JNK2 Catalytic do 100.0 5.3E-41 1.1E-45 355.5 24.0 254 195-518 20-319 (359)
62 KOG4717|consensus 100.0 9.3E-42 2E-46 351.9 16.7 254 196-520 18-276 (864)
63 cd05589 STKc_PKN Catalytic dom 100.0 3.6E-41 7.7E-46 351.8 21.3 252 198-519 1-262 (324)
64 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-41 5.6E-46 352.5 19.9 247 202-519 1-258 (320)
65 cd05626 STKc_LATS2 Catalytic d 100.0 7.4E-41 1.6E-45 357.5 23.3 256 197-519 2-310 (381)
66 cd07874 STKc_JNK3 Catalytic do 100.0 5.2E-41 1.1E-45 354.9 21.6 254 195-518 16-315 (355)
67 cd05601 STKc_CRIK Catalytic do 100.0 2.3E-41 4.9E-46 353.9 18.6 259 196-519 1-268 (330)
68 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-41 6.3E-46 352.5 19.3 246 202-519 1-256 (323)
69 cd05587 STKc_cPKC Catalytic do 100.0 6.4E-41 1.4E-45 349.9 21.8 252 197-519 1-262 (324)
70 cd05621 STKc_ROCK2 Catalytic d 100.0 5.6E-41 1.2E-45 357.1 21.6 260 193-520 40-310 (370)
71 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-41 7E-46 355.1 19.4 256 196-519 1-290 (350)
72 cd07868 STKc_CDK8 Catalytic do 100.0 1.3E-40 2.8E-45 345.7 23.6 251 201-517 6-317 (317)
73 cd05616 STKc_cPKC_beta Catalyt 100.0 7.3E-41 1.6E-45 349.3 21.8 252 197-519 1-262 (323)
74 cd05592 STKc_nPKC_theta_delta 100.0 5.5E-41 1.2E-45 349.4 20.8 247 202-519 1-253 (316)
75 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.8E-41 2.1E-45 345.7 22.5 254 194-519 4-291 (309)
76 cd05584 STKc_p70S6K Catalytic 100.0 6.2E-41 1.3E-45 350.0 21.1 247 202-519 2-261 (323)
77 cd05591 STKc_nPKC_epsilon Cata 100.0 5.7E-41 1.2E-45 349.8 20.7 247 202-519 1-259 (321)
78 cd05620 STKc_nPKC_delta Cataly 100.0 5.3E-41 1.1E-45 349.5 20.4 247 202-519 1-253 (316)
79 KOG0604|consensus 100.0 7.8E-42 1.7E-46 333.5 13.1 251 196-520 61-328 (400)
80 KOG0594|consensus 100.0 9E-41 2E-45 336.1 21.1 261 195-520 10-308 (323)
81 cd05588 STKc_aPKC Catalytic do 100.0 9.2E-41 2E-45 349.6 21.8 247 202-519 1-267 (329)
82 cd05598 STKc_LATS Catalytic do 100.0 4.3E-41 9.4E-46 358.4 19.4 256 196-519 1-306 (376)
83 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-40 2.9E-45 349.0 22.8 265 193-533 2-318 (333)
84 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-40 2.4E-45 353.7 21.9 254 195-518 23-322 (364)
85 cd05629 STKc_NDR_like_fungal C 100.0 8.2E-41 1.8E-45 356.4 21.0 256 196-519 1-310 (377)
86 cd05625 STKc_LATS1 Catalytic d 100.0 9.1E-41 2E-45 356.7 21.3 255 197-519 2-310 (382)
87 PTZ00283 serine/threonine prot 100.0 1.5E-40 3.2E-45 366.5 23.6 265 194-520 30-303 (496)
88 cd05594 STKc_PKB_alpha Catalyt 100.0 4.8E-41 1E-45 351.0 18.6 246 202-519 1-257 (325)
89 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-40 2.4E-45 349.1 20.6 247 202-519 1-267 (329)
90 cd07853 STKc_NLK Catalytic dom 100.0 7.2E-41 1.6E-45 356.3 19.4 258 197-520 1-294 (372)
91 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-40 3.6E-45 354.0 21.9 261 188-509 30-372 (374)
92 PLN00034 mitogen-activated pro 100.0 7.8E-41 1.7E-45 353.5 19.0 258 192-522 70-336 (353)
93 cd05619 STKc_nPKC_theta Cataly 100.0 1.7E-40 3.6E-45 345.8 20.6 247 202-519 1-253 (316)
94 PHA03207 serine/threonine kina 100.0 3.2E-40 6.9E-45 354.0 23.2 250 195-522 91-383 (392)
95 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.9E-40 8.6E-45 339.7 22.9 253 194-518 4-290 (301)
96 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-40 2.7E-45 350.2 19.2 254 196-519 15-303 (343)
97 cd05570 STKc_PKC Catalytic dom 100.0 1.7E-40 3.6E-45 346.0 19.9 247 202-519 1-257 (318)
98 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.6E-40 7.7E-45 334.0 21.8 253 193-508 2-264 (266)
99 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-40 8.4E-45 336.6 21.8 245 204-519 1-262 (280)
100 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-40 5.6E-45 352.7 21.3 260 188-508 27-373 (375)
101 PTZ00267 NIMA-related protein 100.0 4E-40 8.8E-45 362.0 23.1 252 195-518 66-327 (478)
102 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-40 4.9E-45 350.9 20.2 256 196-519 1-298 (360)
103 cd05622 STKc_ROCK1 Catalytic d 100.0 3.3E-40 7.1E-45 351.4 21.5 262 191-520 38-310 (371)
104 cd05605 STKc_GRK4_like Catalyt 100.0 5E-40 1.1E-44 336.7 22.0 251 197-519 1-266 (285)
105 cd05575 STKc_SGK Catalytic dom 100.0 2.8E-40 6E-45 345.0 20.0 246 202-519 1-256 (323)
106 cd05615 STKc_cPKC_alpha Cataly 100.0 4.1E-40 8.8E-45 343.9 21.2 252 197-519 1-262 (323)
107 cd05096 PTKc_DDR1 Catalytic do 100.0 7.6E-40 1.6E-44 338.1 22.9 252 194-507 3-303 (304)
108 cd05597 STKc_DMPK_like Catalyt 100.0 7.8E-40 1.7E-44 342.9 22.5 259 196-519 1-271 (331)
109 PHA03209 serine/threonine kina 100.0 4.9E-40 1.1E-44 348.2 21.0 243 196-519 66-356 (357)
110 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-40 5E-45 344.7 18.2 245 202-519 2-259 (318)
111 PHA03211 serine/threonine kina 100.0 9E-40 1.9E-44 355.9 23.4 247 195-519 168-460 (461)
112 PTZ00284 protein kinase; Provi 100.0 4.9E-40 1.1E-44 360.5 21.1 260 194-522 127-446 (467)
113 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-39 3E-44 337.5 23.4 251 201-517 6-317 (317)
114 cd05623 STKc_MRCK_alpha Cataly 100.0 1E-39 2.2E-44 342.2 22.4 259 196-519 1-271 (332)
115 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.4E-40 1.4E-44 343.0 20.9 247 202-519 1-265 (327)
116 KOG0194|consensus 100.0 2.1E-40 4.6E-45 352.7 16.9 268 183-512 144-423 (474)
117 KOG0596|consensus 100.0 6.2E-40 1.3E-44 342.2 19.4 261 193-519 358-632 (677)
118 cd05111 PTK_HER3 Pseudokinase 100.0 1.9E-39 4.2E-44 331.1 22.6 262 193-517 4-276 (279)
119 KOG1026|consensus 100.0 1.8E-40 3.9E-45 363.9 15.3 261 189-511 479-764 (774)
120 cd07861 STKc_CDK1_euk Catalyti 100.0 3E-39 6.4E-44 329.5 23.3 250 197-517 1-285 (285)
121 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-39 2.6E-44 341.5 20.8 259 196-519 1-271 (331)
122 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-39 5.3E-44 330.2 22.5 250 197-517 1-284 (284)
123 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-39 3.5E-44 337.8 21.4 261 193-516 4-275 (316)
124 KOG0574|consensus 100.0 1.4E-41 3E-46 331.3 5.3 252 196-523 33-292 (502)
125 cd05604 STKc_SGK3 Catalytic do 100.0 7.7E-40 1.7E-44 341.9 18.6 246 202-519 1-256 (325)
126 cd05630 STKc_GRK6 Catalytic do 100.0 3.1E-39 6.7E-44 331.0 22.3 251 197-519 1-266 (285)
127 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-39 3E-44 331.8 19.6 253 193-507 2-281 (283)
128 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-39 2.7E-44 340.4 19.6 245 202-518 1-255 (325)
129 cd05586 STKc_Sck1_like Catalyt 100.0 4.5E-40 9.8E-45 344.2 16.3 248 204-519 1-258 (330)
130 cd05072 PTKc_Lyn Catalytic dom 100.0 4E-39 8.6E-44 324.5 22.5 252 191-507 1-259 (261)
131 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.1E-39 9E-44 323.7 22.4 248 194-506 2-255 (256)
132 KOG4279|consensus 100.0 1.5E-40 3.2E-45 352.4 12.3 245 203-518 582-836 (1226)
133 cd05052 PTKc_Abl Catalytic dom 100.0 5.8E-39 1.3E-43 324.2 23.2 253 191-508 1-261 (263)
134 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.8E-39 8.2E-44 346.2 22.8 262 187-509 28-397 (400)
135 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-39 3.9E-44 338.4 19.7 245 202-518 1-255 (321)
136 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.4E-39 5.1E-44 330.9 20.2 270 196-534 1-282 (286)
137 cd05607 STKc_GRK7 Catalytic do 100.0 4.1E-39 8.8E-44 328.6 21.6 248 204-519 1-259 (277)
138 cd06625 STKc_MEKK3_like Cataly 100.0 9.3E-39 2E-43 321.7 24.0 255 196-517 2-263 (263)
139 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-39 5.4E-44 340.2 20.6 260 191-510 2-334 (337)
140 cd08529 STKc_FA2-like Catalyti 100.0 8.2E-39 1.8E-43 320.5 23.4 249 197-517 1-256 (256)
141 KOG0589|consensus 100.0 6.5E-40 1.4E-44 343.1 15.7 248 195-504 3-257 (426)
142 cd06637 STKc_TNIK Catalytic do 100.0 5.8E-39 1.3E-43 325.1 22.0 259 196-517 6-272 (272)
143 cd05090 PTKc_Ror1 Catalytic do 100.0 5.5E-39 1.2E-43 327.9 21.8 253 193-507 2-281 (283)
144 cd05109 PTKc_HER2 Catalytic do 100.0 7.3E-39 1.6E-43 326.3 22.5 261 193-516 4-275 (279)
145 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.1E-39 2E-43 325.5 23.1 269 196-533 1-280 (283)
146 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-38 2.5E-43 330.4 23.5 260 196-531 1-304 (308)
147 KOG0667|consensus 100.0 4.3E-39 9.2E-44 344.7 20.6 250 197-518 187-506 (586)
148 KOG0610|consensus 100.0 1.9E-39 4.2E-44 329.4 16.8 264 189-518 70-396 (459)
149 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-38 2.8E-43 321.6 22.8 257 197-517 1-265 (265)
150 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-38 2.5E-43 321.1 22.4 248 194-506 2-255 (256)
151 cd05062 PTKc_IGF-1R Catalytic 100.0 8.5E-39 1.8E-43 325.4 21.6 255 191-507 1-276 (277)
152 KOG0607|consensus 100.0 4.9E-40 1.1E-44 323.1 11.9 262 198-522 79-369 (463)
153 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-38 2.4E-43 326.9 22.3 264 191-519 1-285 (288)
154 KOG0196|consensus 100.0 2.7E-40 5.8E-45 355.8 10.5 270 185-517 618-899 (996)
155 KOG0577|consensus 100.0 3.2E-40 7E-45 345.1 10.8 256 197-524 27-288 (948)
156 cd05033 PTKc_EphR Catalytic do 100.0 1.3E-38 2.8E-43 321.9 22.2 253 194-508 2-264 (266)
157 cd07844 STKc_PCTAIRE_like Cata 100.0 1.9E-38 4.1E-43 325.0 23.6 251 195-517 4-291 (291)
158 cd05082 PTKc_Csk Catalytic dom 100.0 1.9E-38 4E-43 319.0 22.9 248 191-507 1-254 (256)
159 cd06619 PKc_MKK5 Catalytic dom 100.0 1.4E-38 3.1E-43 324.6 22.2 252 196-527 1-266 (279)
160 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-38 6E-43 317.1 23.9 250 197-517 1-257 (257)
161 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-38 3.2E-43 325.8 22.3 251 198-520 2-267 (285)
162 KOG0586|consensus 100.0 5.4E-39 1.2E-43 340.7 19.5 258 191-521 51-313 (596)
163 PF00069 Pkinase: Protein kina 100.0 2.4E-39 5.2E-44 324.8 15.7 247 198-517 1-260 (260)
164 KOG1989|consensus 100.0 1.3E-38 2.8E-43 350.7 22.7 273 196-518 37-319 (738)
165 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-38 3.8E-43 325.4 22.3 260 194-516 3-286 (288)
166 cd05116 PTKc_Syk Catalytic dom 100.0 1.5E-38 3.2E-43 320.1 21.4 245 203-509 2-255 (257)
167 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.8E-38 8.3E-43 318.2 24.4 260 197-517 1-267 (267)
168 cd06654 STKc_PAK1 Catalytic do 100.0 3.2E-38 6.9E-43 325.2 24.0 251 196-522 20-278 (296)
169 PTZ00266 NIMA-related protein 100.0 1.9E-38 4.1E-43 362.9 24.5 265 190-518 7-299 (1021)
170 cd06656 STKc_PAK3 Catalytic do 100.0 3.6E-38 7.7E-43 325.0 24.3 253 196-524 19-279 (297)
171 cd05059 PTKc_Tec_like Catalyti 100.0 2.1E-38 4.5E-43 318.9 22.0 248 194-506 2-255 (256)
172 KOG4236|consensus 100.0 1.2E-39 2.5E-44 337.1 12.9 250 201-520 569-825 (888)
173 cd05068 PTKc_Frk_like Catalyti 100.0 3.1E-38 6.6E-43 318.3 23.0 252 191-507 1-259 (261)
174 cd08227 PK_STRAD_alpha Pseudok 100.0 2.2E-38 4.9E-43 331.0 22.6 255 200-519 2-312 (327)
175 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.8E-38 6E-43 318.5 22.3 251 191-507 1-258 (260)
176 cd05115 PTKc_Zap-70 Catalytic 100.0 2.8E-38 6E-43 318.7 22.2 245 203-509 2-255 (257)
177 cd07837 STKc_CdkB_plant Cataly 100.0 3.3E-38 7.2E-43 323.6 23.0 258 196-518 1-295 (295)
178 cd05091 PTKc_Ror2 Catalytic do 100.0 9.2E-39 2E-43 326.0 18.8 253 193-507 2-281 (283)
179 cd05071 PTKc_Src Catalytic dom 100.0 3.6E-38 7.9E-43 318.6 22.8 254 191-510 1-261 (262)
180 cd05094 PTKc_TrkC Catalytic do 100.0 3.4E-38 7.4E-43 323.7 22.8 255 193-510 2-283 (291)
181 cd07845 STKc_CDK10 Catalytic d 100.0 4.9E-38 1.1E-42 325.4 23.9 256 194-518 5-294 (309)
182 cd06624 STKc_ASK Catalytic dom 100.0 5E-38 1.1E-42 318.0 23.5 252 195-517 7-268 (268)
183 cd06651 STKc_MEKK3 Catalytic d 100.0 8E-38 1.7E-42 316.4 24.8 257 196-518 2-265 (266)
184 cd06618 PKc_MKK7 Catalytic dom 100.0 4.8E-38 1E-42 323.4 23.6 279 188-535 7-294 (296)
185 cd06646 STKc_MAP4K5 Catalytic 100.0 5.5E-38 1.2E-42 317.3 23.5 246 196-504 9-264 (267)
186 cd05084 PTKc_Fes Catalytic dom 100.0 1.9E-38 4.2E-43 317.8 20.0 244 202-507 1-251 (252)
187 cd05069 PTKc_Yes Catalytic dom 100.0 4.7E-38 1E-42 317.0 22.9 252 191-508 1-259 (260)
188 PF07714 Pkinase_Tyr: Protein 100.0 1.1E-38 2.4E-43 322.3 18.3 246 199-506 2-259 (259)
189 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.8E-38 1E-42 316.7 22.8 251 191-507 1-258 (260)
190 cd06655 STKc_PAK2 Catalytic do 100.0 4.3E-38 9.3E-43 324.4 22.8 250 196-521 19-276 (296)
191 cd07865 STKc_CDK9 Catalytic do 100.0 9.1E-38 2E-42 322.1 25.1 265 194-517 10-310 (310)
192 cd06645 STKc_MAP4K3 Catalytic 100.0 2.7E-38 5.8E-43 319.6 20.7 250 195-516 8-267 (267)
193 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.1E-38 8.9E-43 325.8 22.5 260 189-509 11-299 (307)
194 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.8E-38 1.7E-42 319.4 24.3 251 198-509 6-281 (283)
195 cd07832 STKc_CCRK Catalytic do 100.0 4E-38 8.7E-43 321.0 21.9 252 197-518 1-286 (286)
196 cd05053 PTKc_FGFR Catalytic do 100.0 4.6E-38 9.9E-43 322.5 22.3 259 189-508 5-290 (293)
197 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.4E-38 9.4E-43 320.8 21.9 259 196-517 16-282 (282)
198 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-37 2.7E-42 317.4 25.1 250 196-517 1-286 (286)
199 cd08228 STKc_Nek6 Catalytic do 100.0 5.5E-38 1.2E-42 317.0 22.3 251 196-508 2-264 (267)
200 cd06612 STKc_MST1_2 Catalytic 100.0 6.1E-38 1.3E-42 314.2 22.5 246 196-517 3-256 (256)
201 cd05088 PTKc_Tie2 Catalytic do 100.0 4.1E-38 8.8E-43 325.5 21.7 261 193-517 4-288 (303)
202 cd07849 STKc_ERK1_2_like Catal 100.0 2.1E-38 4.5E-43 332.5 19.7 259 196-520 5-298 (336)
203 cd05032 PTKc_InsR_like Catalyt 100.0 4.6E-38 1E-42 319.3 21.7 255 191-507 1-276 (277)
204 cd05035 PTKc_Axl_like Catalyti 100.0 7E-38 1.5E-42 316.8 22.9 256 198-508 1-271 (273)
205 cd05049 PTKc_Trk Catalytic dom 100.0 2.2E-38 4.7E-43 322.2 19.3 252 194-507 3-279 (280)
206 cd06643 STKc_SLK Catalytic dom 100.0 5.8E-38 1.3E-42 320.1 22.3 254 198-520 7-268 (282)
207 cd05065 PTKc_EphR_B Catalytic 100.0 5E-38 1.1E-42 318.2 21.6 256 194-508 2-267 (269)
208 cd05075 PTKc_Axl Catalytic dom 100.0 5.2E-38 1.1E-42 318.1 21.6 256 198-508 1-270 (272)
209 cd06639 STKc_myosinIIIB Cataly 100.0 1.3E-37 2.8E-42 319.0 24.7 260 195-518 21-291 (291)
210 cd07843 STKc_CDC2L1 Catalytic 100.0 6.4E-38 1.4E-42 321.6 22.4 254 195-517 4-293 (293)
211 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-37 3E-42 317.6 24.7 260 194-517 16-286 (286)
212 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.2E-38 7E-43 332.3 20.5 260 191-510 2-340 (343)
213 cd05107 PTKc_PDGFR_beta Cataly 100.0 5.2E-38 1.1E-42 337.4 22.4 261 188-509 29-399 (401)
214 cd06609 STKc_MST3_like Catalyt 100.0 8.4E-38 1.8E-42 317.4 22.7 252 196-522 1-259 (274)
215 cd06652 STKc_MEKK2 Catalytic d 100.0 2E-37 4.4E-42 313.0 25.4 257 196-518 2-265 (265)
216 cd05580 STKc_PKA Catalytic dom 100.0 6.6E-38 1.4E-42 321.4 22.1 249 196-519 1-259 (290)
217 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-37 2.8E-42 319.0 24.2 250 196-517 5-291 (291)
218 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.3E-38 1.4E-42 323.8 21.9 260 190-510 9-297 (304)
219 cd06608 STKc_myosinIII_like Ca 100.0 8.7E-38 1.9E-42 315.8 22.5 259 196-517 6-275 (275)
220 cd07855 STKc_ERK5 Catalytic do 100.0 4E-38 8.7E-43 330.1 20.6 259 196-518 5-298 (334)
221 cd05055 PTKc_PDGFR Catalytic d 100.0 7.3E-38 1.6E-42 323.6 22.2 259 189-508 28-300 (302)
222 cd06611 STKc_SLK_like Catalyti 100.0 3.4E-38 7.3E-43 321.3 19.4 256 196-520 5-268 (280)
223 PRK13184 pknD serine/threonine 100.0 1.1E-37 2.3E-42 355.4 25.2 267 195-518 1-299 (932)
224 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.1E-37 2.3E-42 315.4 22.2 255 193-508 2-266 (268)
225 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-37 2.3E-42 313.2 21.8 247 192-507 2-254 (256)
226 cd06630 STKc_MEKK1 Catalytic d 100.0 1.6E-37 3.5E-42 313.5 23.1 258 197-518 1-268 (268)
227 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-37 2.5E-42 329.2 23.0 253 196-518 16-315 (353)
228 cd05089 PTKc_Tie1 Catalytic do 100.0 9.3E-38 2E-42 321.6 21.8 254 196-513 2-279 (297)
229 cd07860 STKc_CDK2_3 Catalytic 100.0 5.8E-38 1.3E-42 320.0 20.0 250 197-517 1-284 (284)
230 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-37 4.3E-42 312.1 23.6 254 196-517 1-267 (267)
231 KOG1095|consensus 100.0 3.5E-38 7.6E-43 357.1 20.1 257 192-510 688-962 (1025)
232 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.6E-38 9.9E-43 321.5 19.1 250 193-518 2-270 (284)
233 cd05051 PTKc_DDR Catalytic dom 100.0 1E-37 2.2E-42 320.1 21.7 252 194-507 3-295 (296)
234 cd06644 STKc_STK10_LOK Catalyt 100.0 1.4E-37 3.1E-42 319.1 22.6 255 196-519 12-274 (292)
235 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-37 3.8E-42 312.3 22.8 253 191-508 1-260 (261)
236 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4E-37 8.7E-42 310.2 25.4 252 196-509 2-265 (267)
237 cd05066 PTKc_EphR_A Catalytic 100.0 1E-37 2.2E-42 315.8 21.1 254 194-508 2-265 (267)
238 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-37 3.8E-42 322.2 23.4 260 189-509 5-293 (314)
239 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.4E-37 3E-42 316.8 22.2 255 194-507 4-276 (277)
240 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-37 2.5E-42 318.7 21.5 260 195-524 3-277 (288)
241 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-37 3E-42 312.2 21.8 244 197-504 1-251 (255)
242 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-37 2.4E-42 314.8 20.9 251 196-508 2-264 (267)
243 KOG0983|consensus 100.0 1.1E-38 2.4E-43 308.0 12.9 279 189-537 85-372 (391)
244 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-37 4E-42 321.0 23.0 260 197-517 1-316 (316)
245 cd08220 STKc_Nek8 Catalytic do 100.0 1.9E-37 4.2E-42 310.5 22.4 249 197-517 1-256 (256)
246 cd08217 STKc_Nek2 Catalytic do 100.0 1.8E-37 3.9E-42 311.4 22.2 251 197-517 1-265 (265)
247 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-37 3.1E-42 312.6 21.3 247 196-504 3-259 (262)
248 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-37 2.5E-42 312.9 20.5 244 193-507 3-252 (254)
249 cd05633 STKc_GRK3 Catalytic do 100.0 1.8E-37 3.9E-42 316.9 22.3 247 203-519 1-260 (279)
250 KOG0690|consensus 100.0 4.1E-39 8.8E-44 317.0 9.6 262 191-517 163-433 (516)
251 cd08218 STKc_Nek1 Catalytic do 100.0 2.3E-37 5.1E-42 310.5 22.6 249 197-517 1-256 (256)
252 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-37 2.5E-42 318.0 20.7 251 194-507 3-279 (280)
253 cd06917 STKc_NAK1_like Catalyt 100.0 3.1E-37 6.7E-42 313.5 23.6 256 197-523 2-264 (277)
254 cd07841 STKc_CDK7 Catalytic do 100.0 3E-37 6.6E-42 317.1 23.8 255 197-519 1-287 (298)
255 PLN00009 cyclin-dependent kina 100.0 2E-37 4.4E-42 318.0 22.4 254 195-518 1-288 (294)
256 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.8E-37 6E-42 315.3 23.2 252 196-507 4-281 (284)
257 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-37 3.2E-42 318.6 21.2 252 197-510 1-287 (290)
258 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.1E-37 6.7E-42 312.7 23.2 260 197-517 2-272 (272)
259 PHA03210 serine/threonine kina 100.0 6.2E-38 1.4E-42 346.3 19.6 269 195-521 147-461 (501)
260 cd07831 STKc_MOK Catalytic dom 100.0 2.8E-37 6E-42 314.2 22.8 249 198-517 1-282 (282)
261 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.8E-38 1.9E-42 314.5 19.0 249 194-507 4-259 (261)
262 cd05574 STKc_phototropin_like 100.0 2.3E-37 4.9E-42 321.2 22.4 258 196-519 1-294 (316)
263 cd05609 STKc_MAST Catalytic do 100.0 2.3E-37 5E-42 319.9 22.4 260 196-519 1-278 (305)
264 cd07866 STKc_BUR1 Catalytic do 100.0 2.9E-37 6.2E-42 318.5 23.0 265 195-517 7-311 (311)
265 KOG4257|consensus 100.0 3.6E-38 7.7E-43 331.6 16.3 250 197-510 390-650 (974)
266 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-37 5.3E-42 315.5 22.1 252 196-517 1-288 (288)
267 cd05073 PTKc_Hck Catalytic dom 100.0 4.1E-37 9E-42 310.1 23.5 252 191-508 1-259 (260)
268 cd06607 STKc_TAO Catalytic dom 100.0 2.6E-37 5.7E-42 319.8 22.7 255 196-522 15-275 (307)
269 cd08221 STKc_Nek9 Catalytic do 100.0 5.7E-37 1.2E-41 307.7 24.2 249 197-517 1-256 (256)
270 cd05056 PTKc_FAK Catalytic dom 100.0 2.1E-37 4.6E-42 313.8 21.2 255 193-511 3-267 (270)
271 KOG0612|consensus 100.0 7.3E-39 1.6E-43 356.5 11.3 259 193-518 72-342 (1317)
272 cd07836 STKc_Pho85 Catalytic d 100.0 2E-37 4.4E-42 315.7 21.1 249 197-517 1-284 (284)
273 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.7E-37 3.6E-42 316.7 20.2 250 196-517 1-286 (286)
274 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-37 3.7E-42 319.2 20.4 253 193-507 2-294 (295)
275 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.5E-38 1.4E-42 318.9 17.0 249 196-519 4-258 (277)
276 cd05112 PTKc_Itk Catalytic dom 100.0 4.1E-37 8.8E-42 308.7 22.5 248 194-506 2-255 (256)
277 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.7E-37 5.9E-42 324.3 22.1 257 196-519 5-296 (337)
278 cd06605 PKc_MAPKK Catalytic do 100.0 7.5E-38 1.6E-42 315.4 16.9 249 196-519 1-262 (265)
279 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-37 7.1E-42 308.3 21.4 242 202-506 1-248 (250)
280 cd05578 STKc_Yank1 Catalytic d 100.0 1.6E-37 3.4E-42 312.3 19.1 248 197-517 1-258 (258)
281 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-37 5.4E-42 316.4 20.8 252 194-507 3-287 (288)
282 cd06632 STKc_MEKK1_plant Catal 100.0 6.8E-37 1.5E-41 306.7 23.5 251 197-517 1-258 (258)
283 cd06640 STKc_MST4 Catalytic do 100.0 4E-37 8.7E-42 313.3 21.9 250 196-520 4-259 (277)
284 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-37 1E-41 308.9 22.0 244 202-508 1-254 (257)
285 cd07864 STKc_CDK12 Catalytic d 100.0 3E-37 6.5E-42 317.6 21.0 264 194-517 5-302 (302)
286 cd05606 STKc_beta_ARK Catalyti 100.0 6.5E-37 1.4E-41 312.5 23.2 248 203-520 1-261 (278)
287 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-37 8.9E-42 322.4 22.2 261 189-510 5-294 (334)
288 cd05043 PTK_Ryk Pseudokinase d 100.0 4.5E-37 9.8E-42 313.0 21.9 256 193-509 3-276 (280)
289 cd05057 PTKc_EGFR_like Catalyt 100.0 5.9E-37 1.3E-41 312.2 22.7 256 193-511 4-270 (279)
290 cd07835 STKc_CDK1_like Catalyt 100.0 2.9E-37 6.2E-42 314.7 20.4 249 198-517 1-283 (283)
291 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.7E-36 3.7E-41 310.5 26.2 254 196-522 1-274 (287)
292 cd05095 PTKc_DDR2 Catalytic do 100.0 5.5E-37 1.2E-41 315.5 22.5 252 194-507 3-295 (296)
293 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.9E-37 1.5E-41 312.8 22.9 254 196-508 4-282 (284)
294 cd05110 PTKc_HER4 Catalytic do 100.0 2.8E-37 6E-42 319.2 20.1 259 193-514 4-273 (303)
295 KOG0579|consensus 100.0 8.8E-39 1.9E-43 335.9 8.7 277 196-542 32-316 (1187)
296 cd00192 PTKc Catalytic domain 100.0 5.4E-37 1.2E-41 307.1 21.3 243 202-506 1-261 (262)
297 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 9.9E-37 2.2E-41 308.9 23.3 249 202-507 1-268 (269)
298 PHA03390 pk1 serine/threonine- 100.0 8.3E-37 1.8E-41 310.0 22.7 240 196-518 14-266 (267)
299 cd08225 STKc_Nek5 Catalytic do 100.0 5.9E-37 1.3E-41 307.2 21.1 250 197-517 1-257 (257)
300 cd07879 STKc_p38delta_MAPK13 C 100.0 4.2E-37 9.1E-42 323.6 20.9 261 190-522 10-305 (342)
301 cd05058 PTKc_Met_Ron Catalytic 100.0 6.3E-37 1.4E-41 308.4 21.3 249 202-509 1-259 (262)
302 cd07838 STKc_CDK4_6_like Catal 100.0 9.9E-37 2.1E-41 310.6 22.9 255 198-517 1-287 (287)
303 cd05572 STKc_cGK_PKG Catalytic 100.0 6.4E-37 1.4E-41 308.6 21.1 243 204-519 1-257 (262)
304 cd06641 STKc_MST3 Catalytic do 100.0 7E-37 1.5E-41 311.6 21.5 252 196-522 4-261 (277)
305 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.6E-36 5.7E-41 304.9 25.4 256 196-517 2-264 (264)
306 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-37 3.8E-42 319.3 17.0 250 196-521 22-279 (292)
307 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.6E-37 9.9E-42 323.5 20.5 254 196-519 15-303 (343)
308 cd07857 STKc_MPK1 Catalytic do 100.0 9E-37 1.9E-41 319.6 22.6 259 197-518 1-296 (332)
309 cd05047 PTKc_Tie Catalytic dom 100.0 7.6E-37 1.6E-41 310.1 21.3 245 202-510 1-269 (270)
310 cd05042 PTKc_Aatyk Catalytic d 100.0 9E-37 1.9E-41 309.0 21.8 249 202-507 1-268 (269)
311 cd06647 STKc_PAK_I Catalytic d 100.0 9.2E-37 2E-41 313.9 22.0 251 196-522 19-277 (293)
312 cd07852 STKc_MAPK15 Catalytic 100.0 3.8E-37 8.3E-42 322.9 19.4 259 196-519 7-300 (337)
313 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.1E-37 1.5E-41 321.9 21.4 266 196-518 5-304 (342)
314 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8E-37 1.7E-41 309.1 20.6 241 202-505 1-260 (262)
315 cd05611 STKc_Rim15_like Cataly 100.0 6.9E-37 1.5E-41 308.0 20.0 247 202-520 2-257 (260)
316 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-36 2.6E-41 305.9 21.5 250 196-519 1-261 (264)
317 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-36 2.5E-41 320.8 22.3 256 196-521 17-307 (345)
318 cd06659 STKc_PAK6 Catalytic do 100.0 5.5E-37 1.2E-41 316.3 19.1 249 196-520 21-277 (297)
319 KOG4645|consensus 100.0 1.1E-38 2.3E-43 359.1 6.7 250 197-504 1236-1493(1509)
320 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-36 3.8E-41 308.6 22.0 243 204-518 1-258 (277)
321 cd05613 STKc_MSK1_N N-terminal 100.0 2.3E-36 5E-41 309.6 22.7 257 197-520 1-274 (290)
322 cd06635 STKc_TAO1 Catalytic do 100.0 2.9E-36 6.4E-41 313.6 23.4 255 196-522 25-285 (317)
323 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-36 4.9E-41 309.6 22.1 250 197-522 20-277 (285)
324 KOG0666|consensus 100.0 8.5E-38 1.9E-42 306.5 10.9 262 196-520 24-343 (438)
325 cd06626 STKc_MEKK4 Catalytic d 100.0 3.3E-36 7.2E-41 303.0 22.8 255 197-517 1-264 (264)
326 PHA02882 putative serine/threo 100.0 3.2E-36 6.9E-41 310.2 23.0 268 193-506 9-293 (294)
327 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-36 2.7E-41 309.9 19.5 241 203-506 2-273 (274)
328 cd05041 PTKc_Fes_like Catalyti 100.0 2.6E-36 5.7E-41 301.9 21.6 244 202-507 1-250 (251)
329 KOG2345|consensus 100.0 4.9E-37 1.1E-41 293.4 15.4 267 189-508 14-299 (302)
330 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-36 2.5E-41 320.4 19.7 256 196-521 15-305 (343)
331 cd06633 STKc_TAO3 Catalytic do 100.0 5.2E-36 1.1E-40 311.3 23.9 253 198-522 23-281 (313)
332 cd08216 PK_STRAD Pseudokinase 100.0 2.1E-36 4.6E-41 313.5 20.8 259 198-521 4-302 (314)
333 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-36 3.5E-41 308.7 19.6 252 198-517 1-287 (287)
334 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.3E-37 9.2E-42 309.9 15.1 242 202-506 1-257 (258)
335 cd05040 PTKc_Ack_like Catalyti 100.0 2.7E-36 5.9E-41 302.9 20.5 244 202-507 1-256 (257)
336 cd05583 STKc_MSK_N N-terminal 100.0 3.2E-36 7E-41 308.2 21.4 260 197-520 1-272 (288)
337 cd05044 PTKc_c-ros Catalytic d 100.0 2.3E-36 5E-41 305.5 20.1 249 202-507 1-268 (269)
338 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-36 2.8E-41 317.5 18.6 259 197-519 1-294 (330)
339 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.5E-36 9.8E-41 304.0 21.9 256 198-508 1-271 (273)
340 cd06634 STKc_TAO2 Catalytic do 100.0 5E-36 1.1E-40 310.6 22.7 257 196-524 15-277 (308)
341 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-35 2.3E-40 296.7 24.2 252 197-517 1-260 (260)
342 KOG0669|consensus 100.0 2.8E-38 6.1E-43 302.0 5.1 286 196-540 17-341 (376)
343 PTZ00024 cyclin-dependent prot 100.0 3.5E-36 7.6E-41 315.2 21.2 269 196-519 8-318 (335)
344 cd05581 STKc_PDK1 Catalytic do 100.0 2.5E-36 5.5E-41 306.2 19.5 256 196-517 1-280 (280)
345 KOG0986|consensus 100.0 3.5E-37 7.6E-42 315.1 12.9 256 191-518 180-450 (591)
346 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.8E-36 1E-40 305.1 21.3 253 196-507 4-281 (284)
347 cd08215 STKc_Nek Catalytic dom 100.0 7.2E-36 1.6E-40 298.3 22.0 249 197-517 1-258 (258)
348 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-35 2.2E-40 297.1 22.7 248 197-517 1-254 (254)
349 cd05046 PTK_CCK4 Pseudokinase 100.0 4.7E-36 1E-40 304.5 20.5 250 195-507 4-274 (275)
350 cd05122 PKc_STE Catalytic doma 100.0 1.2E-35 2.7E-40 295.0 22.9 245 197-516 1-253 (253)
351 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.6E-36 1.4E-40 312.9 22.0 248 196-518 10-292 (328)
352 cd05118 STKc_CMGC Catalytic do 100.0 4.5E-36 9.7E-41 305.2 20.0 249 198-517 1-283 (283)
353 KOG0584|consensus 100.0 5E-37 1.1E-41 326.1 13.2 251 198-520 42-302 (632)
354 cd07830 STKc_MAK_like Catalyti 100.0 5.9E-36 1.3E-40 304.8 20.0 248 198-517 1-283 (283)
355 KOG3653|consensus 100.0 5.5E-37 1.2E-41 315.7 12.3 261 192-508 206-502 (534)
356 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.8E-36 1.3E-40 300.3 19.6 241 202-506 1-258 (259)
357 KOG1035|consensus 100.0 3.2E-36 7E-41 337.9 19.0 282 196-519 479-876 (1351)
358 cd08226 PK_STRAD_beta Pseudoki 100.0 4.9E-36 1.1E-40 313.5 19.0 252 202-518 4-312 (328)
359 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.8E-35 4E-40 299.8 22.4 248 202-506 1-266 (268)
360 smart00219 TyrKc Tyrosine kina 100.0 1.1E-35 2.4E-40 297.5 20.5 244 198-504 1-256 (258)
361 cd07829 STKc_CDK_like Catalyti 100.0 1.4E-35 3.1E-40 301.3 21.4 249 198-517 1-282 (282)
362 cd05579 STKc_MAST_like Catalyt 100.0 6.6E-36 1.4E-40 300.1 18.5 249 204-519 1-262 (265)
363 cd08222 STKc_Nek11 Catalytic d 100.0 6.6E-36 1.4E-40 300.9 18.5 251 197-517 1-260 (260)
364 cd06657 STKc_PAK4 Catalytic do 100.0 1E-35 2.2E-40 306.3 19.7 249 198-522 22-278 (292)
365 cd06614 STKc_PAK Catalytic dom 100.0 2.4E-35 5.2E-40 301.5 21.9 249 196-519 19-275 (286)
366 KOG4278|consensus 100.0 2.3E-36 4.9E-41 317.3 14.4 258 188-510 259-524 (1157)
367 KOG1094|consensus 100.0 4.7E-36 1E-40 314.2 16.2 255 191-507 533-802 (807)
368 KOG2052|consensus 100.0 7.1E-36 1.5E-40 305.5 17.0 258 196-507 211-501 (513)
369 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-35 5.4E-40 294.9 20.4 243 197-504 1-252 (256)
370 KOG4250|consensus 100.0 6.1E-36 1.3E-40 321.4 15.8 207 198-458 15-226 (732)
371 cd08528 STKc_Nek10 Catalytic d 100.0 4E-35 8.8E-40 296.7 20.8 256 197-507 1-268 (269)
372 KOG1027|consensus 100.0 3.2E-36 6.9E-41 327.5 12.9 268 201-543 514-792 (903)
373 PLN03225 Serine/threonine-prot 100.0 1.4E-34 3E-39 322.5 26.2 269 190-522 126-458 (566)
374 cd05576 STKc_RPK118_like Catal 100.0 3.1E-35 6.8E-40 293.0 18.7 226 207-517 4-237 (237)
375 KOG0696|consensus 100.0 3.1E-36 6.7E-41 304.4 11.2 248 189-498 342-594 (683)
376 cd05610 STKc_MASTL Catalytic d 100.0 5.1E-35 1.1E-39 333.2 22.7 147 195-393 3-152 (669)
377 cd05123 STKc_AGC Catalytic dom 100.0 5.6E-35 1.2E-39 291.6 19.8 242 204-517 1-250 (250)
378 KOG0199|consensus 100.0 7.6E-36 1.7E-40 317.6 12.2 250 193-504 107-367 (1039)
379 KOG0662|consensus 100.0 3.2E-35 7E-40 268.4 12.6 254 196-520 2-289 (292)
380 KOG0614|consensus 100.0 1.9E-36 4.1E-41 312.8 4.2 257 189-518 413-681 (732)
381 KOG0608|consensus 100.0 8.2E-35 1.8E-39 306.6 16.4 260 192-519 625-933 (1034)
382 KOG1006|consensus 100.0 2.5E-36 5.4E-41 290.8 3.7 262 188-520 56-333 (361)
383 KOG0587|consensus 100.0 4E-34 8.7E-39 312.5 21.4 262 196-521 19-289 (953)
384 KOG0200|consensus 100.0 4.9E-34 1.1E-38 321.0 19.8 257 190-508 290-578 (609)
385 KOG1151|consensus 100.0 6.6E-35 1.4E-39 296.8 11.5 265 195-518 462-745 (775)
386 PLN03224 probable serine/threo 100.0 3.7E-33 8.1E-38 304.6 24.5 285 191-518 140-504 (507)
387 KOG0671|consensus 100.0 4.4E-34 9.5E-39 288.0 10.0 259 195-522 88-414 (415)
388 PLN00113 leucine-rich repeat r 100.0 7.1E-33 1.5E-37 329.5 20.9 236 196-509 690-951 (968)
389 KOG1025|consensus 100.0 1.8E-33 4E-38 304.0 12.9 259 197-518 697-966 (1177)
390 KOG0695|consensus 100.0 2.2E-33 4.7E-38 277.4 12.4 248 188-498 242-503 (593)
391 KOG0665|consensus 100.0 1E-32 2.3E-37 272.3 10.5 252 196-518 17-314 (369)
392 KOG0668|consensus 100.0 1E-32 2.3E-37 260.6 9.5 253 189-518 32-326 (338)
393 smart00220 S_TKc Serine/Threon 100.0 3.4E-31 7.3E-36 260.9 19.0 235 208-517 1-244 (244)
394 KOG0984|consensus 100.0 4.5E-32 9.7E-37 253.0 9.5 209 191-459 41-255 (282)
395 KOG0664|consensus 100.0 4.4E-33 9.6E-38 268.9 1.6 257 196-518 53-347 (449)
396 KOG1152|consensus 100.0 2.5E-31 5.4E-36 278.8 11.9 209 193-458 558-771 (772)
397 KOG1290|consensus 100.0 1.7E-29 3.6E-34 261.1 18.5 143 192-376 74-224 (590)
398 KOG0670|consensus 100.0 2.2E-30 4.8E-35 268.5 11.9 252 196-519 432-751 (752)
399 KOG1167|consensus 100.0 3.1E-30 6.7E-35 263.5 12.4 251 196-518 36-385 (418)
400 PLN00181 protein SPA1-RELATED; 100.0 9.2E-30 2E-34 296.2 13.5 214 270-519 30-270 (793)
401 KOG0576|consensus 100.0 3.6E-30 7.7E-35 274.1 6.4 252 196-520 15-277 (829)
402 KOG1024|consensus 100.0 8.4E-28 1.8E-32 242.4 17.9 260 196-509 284-555 (563)
403 cd00180 PKc Catalytic domain o 100.0 4.5E-27 9.7E-32 225.3 22.0 209 204-504 1-213 (215)
404 KOG1345|consensus 100.0 1.3E-28 2.9E-33 238.1 8.3 247 196-504 24-283 (378)
405 smart00750 KIND kinase non-cat 99.9 3.5E-27 7.7E-32 223.6 11.9 152 324-504 1-164 (176)
406 smart00221 STYKc Protein kinas 99.9 1.4E-25 3.1E-30 219.1 18.0 199 198-458 1-202 (225)
407 KOG0195|consensus 99.9 1.3E-24 2.9E-29 210.3 8.0 258 185-509 179-446 (448)
408 PRK09188 serine/threonine prot 99.9 1.3E-23 2.9E-28 220.7 14.1 188 192-440 14-210 (365)
409 KOG0590|consensus 99.9 1.6E-24 3.4E-29 241.7 7.0 257 199-519 321-590 (601)
410 KOG1164|consensus 99.9 8E-22 1.7E-26 206.1 24.3 264 197-510 19-298 (322)
411 COG0515 SPS1 Serine/threonine 99.9 8.6E-22 1.9E-26 199.7 22.7 251 198-504 2-274 (384)
412 KOG1163|consensus 99.9 3E-22 6.5E-27 191.3 15.0 259 190-507 9-282 (341)
413 KOG1165|consensus 99.9 6E-22 1.3E-26 197.0 16.1 257 196-509 28-299 (449)
414 PF14531 Kinase-like: Kinase-l 99.9 5.3E-21 1.1E-25 193.4 16.8 262 196-496 12-288 (288)
415 KOG0603|consensus 99.9 1.1E-22 2.5E-27 217.8 3.3 244 203-517 1-252 (612)
416 KOG1240|consensus 99.8 3.1E-21 6.8E-26 215.7 5.9 253 197-504 24-290 (1431)
417 cd05147 RIO1_euk RIO kinase fa 99.8 1.2E-20 2.7E-25 182.0 9.1 154 201-395 2-167 (190)
418 KOG0606|consensus 99.8 1.2E-20 2.6E-25 211.1 9.2 147 350-507 153-314 (1205)
419 cd05145 RIO1_like RIO kinase f 99.8 8E-20 1.7E-24 176.4 12.0 155 201-397 2-169 (190)
420 PRK10359 lipopolysaccharide co 99.8 3E-19 6.6E-24 175.6 11.9 185 196-450 31-216 (232)
421 PRK12274 serine/threonine prot 99.8 4.6E-19 1E-23 171.0 11.5 197 199-460 5-211 (218)
422 PRK10345 hypothetical protein; 99.8 1E-18 2.2E-23 170.8 12.8 145 199-392 5-156 (210)
423 KOG1033|consensus 99.8 1.4E-19 3E-24 190.8 3.7 178 312-504 328-511 (516)
424 KOG1023|consensus 99.8 3.7E-18 8E-23 183.2 12.7 205 269-509 4-224 (484)
425 KOG1166|consensus 99.7 3.3E-17 7.2E-22 187.1 13.0 253 192-507 694-951 (974)
426 smart00090 RIO RIO-like kinase 99.7 1.6E-17 3.4E-22 165.9 8.4 158 197-397 29-200 (237)
427 PRK14879 serine/threonine prot 99.7 8.9E-17 1.9E-21 157.1 13.0 141 202-394 2-143 (211)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 1.9E-16 4.1E-21 153.4 11.9 137 203-394 1-138 (199)
429 cd05144 RIO2_C RIO kinase fami 99.7 1.6E-16 3.4E-21 154.3 10.2 152 198-397 17-177 (198)
430 PRK09605 bifunctional UGMP fam 99.7 3.8E-16 8.3E-21 174.3 13.2 142 198-395 335-477 (535)
431 KOG0590|consensus 99.6 2.7E-17 5.9E-22 183.9 0.4 257 195-519 19-291 (601)
432 cd05119 RIO RIO kinase family, 99.6 3E-15 6.6E-20 143.4 10.1 151 201-396 2-165 (187)
433 PRK01723 3-deoxy-D-manno-octul 99.6 1.1E-14 2.3E-19 145.7 14.0 148 202-394 37-191 (239)
434 KOG0601|consensus 99.5 3.7E-14 8.1E-19 152.6 8.5 252 196-504 114-378 (524)
435 cd05120 APH_ChoK_like Aminogly 99.5 1.8E-13 3.8E-18 124.7 10.6 133 200-394 2-138 (155)
436 TIGR01982 UbiB 2-polyprenylphe 99.4 6.4E-13 1.4E-17 144.2 13.4 160 202-396 123-308 (437)
437 KOG1266|consensus 99.3 1.1E-12 2.4E-17 131.2 5.6 198 270-504 125-330 (458)
438 PRK04750 ubiB putative ubiquin 99.3 8.3E-12 1.8E-16 137.5 10.6 167 195-397 119-316 (537)
439 KOG0606|consensus 99.3 2.2E-12 4.9E-17 145.5 4.5 181 315-507 879-1091(1205)
440 cd05151 ChoK Choline Kinase (C 99.2 6E-11 1.3E-15 111.5 9.2 127 201-394 3-136 (170)
441 cd05146 RIO3_euk RIO kinase fa 99.2 1.2E-10 2.6E-15 112.4 11.3 153 201-396 2-175 (197)
442 KOG0601|consensus 99.2 2.6E-11 5.5E-16 130.9 7.2 248 192-504 261-513 (524)
443 KOG3087|consensus 99.1 1.6E-09 3.5E-14 101.2 13.6 151 200-394 11-165 (229)
444 KOG1243|consensus 99.0 8.9E-09 1.9E-13 112.6 15.6 179 258-502 59-238 (690)
445 COG3642 Mn2+-dependent serine/ 98.9 1.5E-08 3.2E-13 95.3 12.8 138 202-394 2-140 (204)
446 PRK15123 lipopolysaccharide co 98.8 4.5E-08 9.7E-13 99.4 14.2 153 210-394 36-194 (268)
447 PF01163 RIO1: RIO1 family; I 98.8 8.3E-09 1.8E-13 99.1 8.4 144 211-396 1-157 (188)
448 COG4248 Uncharacterized protei 98.8 1.7E-07 3.7E-12 97.5 17.9 178 315-505 85-296 (637)
449 KOG2137|consensus 98.8 3.1E-09 6.7E-14 116.5 5.2 156 338-504 97-264 (700)
450 cd05154 ACAD10_11_like Acyl-Co 98.8 3.2E-08 7E-13 96.8 10.1 145 202-394 4-206 (223)
451 KOG0690|consensus 98.6 1.9E-08 4.1E-13 100.9 3.7 60 60-121 398-465 (516)
452 PF06293 Kdo: Lipopolysacchari 98.6 2.3E-07 4.9E-12 90.8 11.2 80 313-395 90-171 (206)
453 KOG3741|consensus 98.6 1E-06 2.2E-11 94.0 16.0 218 208-507 288-523 (655)
454 PRK09902 hypothetical protein; 98.6 6.6E-07 1.4E-11 86.9 12.9 150 204-394 26-179 (216)
455 COG0478 RIO-like serine/threon 98.4 1.2E-06 2.7E-11 87.2 9.3 148 199-394 94-251 (304)
456 KOG0694|consensus 98.4 1.6E-07 3.4E-12 102.8 2.5 63 57-121 595-665 (694)
457 COG0661 AarF Predicted unusual 98.4 2.4E-06 5.3E-11 94.0 11.6 161 202-397 131-317 (517)
458 KOG0598|consensus 98.3 3.2E-07 6.9E-12 94.0 2.9 67 59-127 255-328 (357)
459 KOG1235|consensus 98.1 2.6E-05 5.6E-10 85.8 11.6 162 202-397 167-357 (538)
460 PF06176 WaaY: Lipopolysacchar 98.1 5.6E-05 1.2E-09 73.9 12.7 152 196-394 31-183 (229)
461 COG1718 RIO1 Serine/threonine 97.8 3.7E-05 8E-10 76.0 7.2 74 315-396 141-217 (268)
462 KOG0576|consensus 97.8 5.4E-06 1.2E-10 90.6 0.3 245 198-518 244-502 (829)
463 TIGR02172 Fb_sc_TIGR02172 Fibr 97.8 0.00035 7.7E-09 69.3 12.7 29 360-394 154-182 (226)
464 PF13095 FTA2: Kinetochore Sim 97.7 0.00041 8.9E-09 67.1 12.4 161 196-392 37-206 (207)
465 COG2112 Predicted Ser/Thr prot 97.7 0.00019 4.2E-09 67.4 8.7 129 198-395 24-156 (201)
466 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.00073 1.6E-08 65.6 11.8 150 201-388 6-165 (199)
467 PF01636 APH: Phosphotransfera 97.6 0.00068 1.5E-08 66.3 11.8 28 201-228 2-29 (239)
468 KOG1035|consensus 97.5 0.00014 3.1E-09 84.6 7.2 202 258-519 232-439 (1351)
469 PLN02876 acyl-CoA dehydrogenas 97.5 0.0007 1.5E-08 79.8 11.7 64 201-283 43-112 (822)
470 cd05150 APH Aminoglycoside 3'- 97.4 0.0015 3.2E-08 65.3 11.3 30 359-393 163-192 (244)
471 PF12260 PIP49_C: Protein-kina 97.2 0.001 2.2E-08 64.1 7.4 98 257-395 8-112 (188)
472 KOG0696|consensus 97.0 0.00032 6.9E-09 73.1 2.5 56 59-118 579-644 (683)
473 KOG1826|consensus 96.8 0.0023 4.9E-08 76.7 6.7 175 314-504 1305-1491(2724)
474 PRK10593 hypothetical protein; 96.8 0.025 5.4E-07 58.6 13.8 65 199-283 17-81 (297)
475 PRK09550 mtnK methylthioribose 96.7 0.015 3.4E-07 62.4 12.0 69 201-280 31-101 (401)
476 cd05157 ETNK_euk Ethanolamine 96.7 0.017 3.6E-07 57.2 11.4 30 360-393 171-200 (235)
477 cd05155 APH_ChoK_like_1 Unchar 96.6 0.0093 2E-07 59.3 9.4 31 359-394 164-194 (235)
478 TIGR02721 ycfN_thiK thiamine k 96.5 0.02 4.2E-07 57.7 10.5 28 360-393 147-174 (256)
479 TIGR00938 thrB_alt homoserine 96.4 0.025 5.4E-07 58.7 11.0 29 359-392 187-215 (307)
480 cd05153 HomoserineK_II Homoser 96.4 0.014 3E-07 60.0 8.9 29 359-392 175-203 (296)
481 KOG0695|consensus 96.3 0.0025 5.5E-08 64.9 2.9 60 60-121 489-557 (593)
482 TIGR01767 MTRK 5-methylthiorib 96.3 0.035 7.5E-07 58.7 11.3 67 203-280 2-70 (370)
483 KOG0605|consensus 96.2 0.0022 4.7E-08 69.2 2.0 49 61-114 423-477 (550)
484 PRK05231 homoserine kinase; Pr 96.2 0.077 1.7E-06 55.2 13.6 29 359-392 187-215 (319)
485 KOG0610|consensus 96.2 0.0019 4.2E-08 67.7 1.4 42 59-101 366-413 (459)
486 KOG2268|consensus 95.9 0.0033 7.1E-08 64.6 1.6 153 198-396 94-253 (465)
487 PRK12396 5-methylribose kinase 95.8 0.044 9.5E-07 58.6 9.3 68 201-280 34-103 (409)
488 KOG0616|consensus 95.3 0.01 2.2E-07 59.9 2.5 41 60-100 271-319 (355)
489 KOG0986|consensus 95.3 0.0092 2E-07 63.4 2.0 42 61-102 421-470 (591)
490 cd05156 ChoK_euk Choline Kinas 95.2 0.13 2.8E-06 53.1 10.4 32 360-392 180-211 (302)
491 KOG1236|consensus 95.2 0.069 1.5E-06 56.7 8.2 60 315-376 320-381 (565)
492 cd05582 STKc_RSK_N N-terminal 95.1 0.016 3.4E-07 60.2 3.2 78 57-136 225-314 (318)
493 KOG1093|consensus 94.4 0.045 9.8E-07 59.6 4.4 70 435-504 110-193 (725)
494 PLN02756 S-methyl-5-thioribose 94.2 0.61 1.3E-05 50.3 12.6 29 200-228 36-64 (418)
495 COG5072 ALK1 Serine/threonine 94.2 0.12 2.6E-06 54.2 7.0 75 312-397 298-373 (488)
496 KOG2270|consensus 94.2 0.29 6.3E-06 51.5 9.6 75 315-397 239-316 (520)
497 KOG0614|consensus 94.1 0.047 1E-06 58.9 3.8 56 58-115 649-712 (732)
498 PLN02421 phosphotransferase, a 93.9 0.57 1.2E-05 49.2 11.7 29 360-392 183-211 (330)
499 KOG0612|consensus 93.4 0.061 1.3E-06 63.1 3.5 54 59-114 310-370 (1317)
500 COG3173 Predicted aminoglycosi 92.7 0.77 1.7E-05 47.9 10.0 31 360-395 199-229 (321)
No 1
>KOG4158|consensus
Probab=100.00 E-value=3.6e-66 Score=519.59 Aligned_cols=522 Identities=37% Similarity=0.552 Sum_probs=436.5
Q ss_pred CchhhhhHhhhhcchhhhhhhccC---CCCCccc-----cc-------cCCCCCCCCCCCCCCC-CCCchhhHHhHHHHH
Q psy4039 1 MSLRTLLFRFYHNGKLLVRYIKPL---QPGHKIE-----FL-------TQPPATSSGQGRLSAP-AGHPIQTYFQNARKL 64 (588)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 64 (588)
||+|.++.|.||+||.||-..... +||++.- .+ -..|+.+|.|++++.| ....+++++||.++|
T Consensus 1 Msvr~~~~r~~~~gr~ll~~~~~kp~~~rglprp~pAa~~lr~~vPr~v~~p~~~Pr~~~l~~p~~~tr~~rv~q~~~~l 80 (598)
T KOG4158|consen 1 MSVRRFGKRAYRIGRELLAKGGRKPIFQRGLPRPFPAAYNLRVHVPRVVLKPAPFPRQNALRIPRLVTRHGRVFQPFSSL 80 (598)
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCchhhccCCCCccccccccccccceecCCCCCccccccCCCccchhhhhhhccHHHH
Confidence 999999999999999998777322 6665531 11 1267778999998888 336788999999999
Q ss_pred HHHhhhhhhcCCchhHHHhHHHHHHhhhcCCCCcccccccccccCcccccccccccccchhhHHhhhhhhccCCCCceee
Q psy4039 65 FVNSLLNRVTNSMASDLRRKTIQQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSMASDLRRKTLQQLLYKDNSKPFLA 144 (588)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 144 (588)
+.++-..|+++.-.++.+-..--+|. .
T Consensus 81 ~i~~~r~~v~~~w~~~~~~rat~~l~-----------------------------------------------------f 107 (598)
T KOG4158|consen 81 IIERHRFQVQNDWRRKFQPRATIRLE-----------------------------------------------------F 107 (598)
T ss_pred HHHHHHHHHHHHHhhhcCccceeeec-----------------------------------------------------c
Confidence 99999999976533322221111111 1
Q ss_pred eeeeeeccccccCCCcchhhhhhHHHHHHHhHhhhhhcccccC-CCccccccCCeEEeeeecccCceeEEEEEEC-----
Q psy4039 145 FVGVSLASGTGILTKEDEFEGVCWEIRHAVNNMFDKLVQVETL-PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR----- 218 (588)
Q Consensus 145 ~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~----- 218 (588)
-+++.++.+.+.+.. +++++|||++......+... .+++. .....+.+++|++++.||+|+.+.||.|+..
T Consensus 108 g~gv~Lve~~~~~s~--~l~gvCwEir~~~~~ks~~w-hDei~~r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~ 184 (598)
T KOG4158|consen 108 GRGVDLVERIRQISG--NLSGVCWEIRYNEDLKSTEW-HDEIPNRIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSD 184 (598)
T ss_pred ccCccHHHHHHHHhc--chhhHHHHHHHHHhhhccCC-CCcCcchhhcccchhhhcccchhhccchhhhhhhhcCCCccc
Confidence 133444444444433 38899999999887665444 44544 5567899999999999999999999998876
Q ss_pred --------------------------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH------
Q psy4039 219 --------------------------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM------ 260 (588)
Q Consensus 219 --------------------------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~------ 260 (588)
..+.|||+|++.+..+++..+++.|.+|.++.......-|..
T Consensus 185 le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~ 264 (598)
T KOG4158|consen 185 LESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRP 264 (598)
T ss_pred ccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCchHHHHHHhhhhccCcchhhhhcccccceeee
Confidence 347899999999999999999999999999988766654431
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHH
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMH 340 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~ 340 (588)
.-+....+.+|||||+++++|.+..+.+++....||+++|.|++|+ |++++.++|+||..|..+|.+|+-.+ ..+..
T Consensus 265 l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~-g~g~~~tlylvMkrY~~tLr~yl~~~--~~s~r 341 (598)
T KOG4158|consen 265 LPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS-GAGEPKTLYLVMKRYRQTLREYLWTR--HRSYR 341 (598)
T ss_pred CCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc-ccCCCceEEEehhcchhhHHHHHhcC--CCchH
Confidence 1112224468999999999999999999999999999999999999 78999999999999999999999887 78999
Q ss_pred HHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC-CCccccccccccccCCccccch
Q psy4039 341 ERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS-GLSMQYSSADIELGGNVALMAP 419 (588)
Q Consensus 341 ~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~-~~~~~~~~~~~~~~GT~~Y~AP 419 (588)
....++.|+++|+.|||.+||.|||+|++|||+.-+ ++.++.++|+|||+|...+. +...++.+...+.+|+-..|||
T Consensus 342 ~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eld-dD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELD-DDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHHHHHccchhhcccccceEEEec-CCCCcEEEEcccceeeeccccccccccccccccCCCcceecch
Confidence 999999999999999999999999999999999887 44558999999999988665 6778899988999999999999
Q ss_pred hHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc----cccccccccccCCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 420 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS----ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 420 E~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~----~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
|+...-++.+.+.+|.|+|.|+.|.+.||+++...||++. .....|.+...|.+++.+|+.+++||..+|++||++
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999982 444557888999999999999999999999999999
Q ss_pred CCCHHHHHHHHhhhhhcCCcccc-CCCCChhHHHHHHHhhhccccccCccccC---------CcccCHHHHHHHHHhhhH
Q psy4039 496 RPSAELAATVCQLYLWAPKHWLY-GATPSHNEIMQWLLTLTTKVLCTGVSYGG---------HVRRTFVEYQLISTFLKR 565 (588)
Q Consensus 496 Rps~~e~l~~L~~~~~~~h~w~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~e~~~~~~fl~~ 565 (588)
|+++.-+.+++++.+|.+|.|++ ...+...++++||.+.+++++|++++... .......++.++.+++++
T Consensus 501 Rvsp~iAANvl~LsLw~~~~~vka~~~~~~~~~~~wLL~~sskvl~~~r~~~~~~~m~~~~~~~~~a~~~~~Lic~~l~q 580 (598)
T KOG4158|consen 501 RVSPNIAANVLNLSLWRMGEDVKAMMEKCGISQMTWLLAGSSKVLSQKRNSRLDKVMNLITAETIMANLAPHLICRALRQ 580 (598)
T ss_pred cCCccHHHhHHHHHHhcCchHHHHhcccccHHHHHHHHHhhHHHHhccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 67788899999999999999999997522 223445667799999999
Q ss_pred HhHHHHHHHHHHHHHhc
Q psy4039 566 AEFRLITNALQYIQRVL 582 (588)
Q Consensus 566 ~~~~~i~~a~~~~~~~~ 582 (588)
+.+..+..+..|++...
T Consensus 581 arl~~~s~~~~Wr~~~~ 597 (598)
T KOG4158|consen 581 ARLTFLSRMDIWRSLQY 597 (598)
T ss_pred HHHHHhhhhHHHHHhhc
Confidence 99999999999998754
No 2
>KOG0615|consensus
Probab=100.00 E-value=1.5e-52 Score=424.20 Aligned_cols=263 Identities=27% Similarity=0.330 Sum_probs=216.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|.+.+.||+|+||.|-+|..+ |+.||||++.+......+. .......+.+|++||++| +|||
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~----------~~~~~~~v~~EieILkkL----~HP~ 237 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR----------AIAKTRDVQNEIEILKKL----SHPN 237 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc----------cccchhhhHHHHHHHHhc----CCCC
Confidence 77899999999999999999987 8999999996533222111 011233457899999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++|+..+ +.|+||||+ +|+|.+++-.++ .+.+.....+++||+.|
T Consensus 238 IV~~~d~f~~~d----------------------------s~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~a 288 (475)
T KOG0615|consen 238 IVRIKDFFEVPD----------------------------SSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTA 288 (475)
T ss_pred EEEEeeeeecCC----------------------------ceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHH
Confidence 999999998753 489999999 689999998765 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|||++||+||||||+|||+..+.++ ..+||+|||+|+..+.+..+ .+.||||.|.|||++.......
T Consensus 289 vkYLH~~GI~HRDiKPeNILl~~~~e~--~llKItDFGlAK~~g~~sfm------~TlCGTpsYvAPEVl~~kg~~~--- 357 (475)
T KOG0615|consen 289 VKYLHSQGIIHRDIKPENILLSNDAED--CLLKITDFGLAKVSGEGSFM------KTLCGTPSYVAPEVLASKGVEY--- 357 (475)
T ss_pred HHHHHHcCcccccCCcceEEeccCCcc--eEEEecccchhhccccceeh------hhhcCCccccChhheecCCeec---
Confidence 999999999999999999999876332 68999999999987654333 3789999999999998765331
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc-------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
+..|+|+||+||++|-+++|.+||.+...... -.....|..|..+++++++||.+||..||++|||++++++
T Consensus 358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~- 436 (475)
T KOG0615|consen 358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN- 436 (475)
T ss_pred ccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc-
Confidence 23589999999999999999999987543331 1123345667889999999999999999999999999999
Q ss_pred HhhhhhcCCccccCCC
Q psy4039 506 CQLYLWAPKHWLYGAT 521 (588)
Q Consensus 506 L~~~~~~~h~w~~~~~ 521 (588)
|||++...
T Consensus 437 --------hpW~~~~~ 444 (475)
T KOG0615|consen 437 --------HPWFKDAP 444 (475)
T ss_pred --------Chhhhccc
Confidence 99998443
No 3
>KOG0581|consensus
Probab=100.00 E-value=1.9e-50 Score=406.38 Aligned_cols=270 Identities=22% Similarity=0.303 Sum_probs=226.9
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
...+..++++..+.||+|..|+||++.++ ++.+|+|.+.. +..+..++++.+|++|++.+
T Consensus 73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~----------------~~~~~~~~Qi~rEl~il~~~-- 134 (364)
T KOG0581|consen 73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL----------------NIDPALQKQILRELEILRSC-- 134 (364)
T ss_pred ccccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc----------------cCCHHHHHHHHHHHHHHhhC--
Confidence 34567788999999999999999999998 89999999932 11122456677899999998
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+|||||++||+|.+.. . .+.++|||| +|||++++...+ .++|.....|+
T Consensus 135 --~spyIV~~ygaF~~~~--------------------------~-~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia 184 (364)
T KOG0581|consen 135 --QSPYIVGFYGAFYSNG--------------------------E-EISICMEYMDGGSLDDILKRVG-RIPEPVLGKIA 184 (364)
T ss_pred --CCCCeeeEeEEEEeCC--------------------------c-eEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHH
Confidence 9999999999998731 0 499999999 589999998764 89999999999
Q ss_pred HHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 347 TQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 347 ~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
.+|++||.|||+ ++||||||||+|||++.. +.+||||||.++.+.+. ...+++||..|||||.+.+.
T Consensus 185 ~~VL~GL~YLh~~~~IIHRDIKPsNlLvNsk-----GeVKicDFGVS~~lvnS-------~a~tfvGT~~YMsPERi~g~ 252 (364)
T KOG0581|consen 185 RAVLRGLSYLHEERKIIHRDIKPSNLLVNSK-----GEVKICDFGVSGILVNS-------IANTFVGTSAYMSPERISGE 252 (364)
T ss_pred HHHHHHHHHHhhccCeeeccCCHHHeeeccC-----CCEEeccccccHHhhhh-------hcccccccccccChhhhcCC
Confidence 999999999995 999999999999999988 89999999999876543 22368899999999999988
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccc--------ccccccccCCCCCC-ccHHHHHHHHHhhhhCCCCC
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN--------TDYEVNALPQLNTN-VPEVMRRLVAKLLENDPSDR 496 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~--------~~~~~~~~~~~~~~-~~~~l~~Li~~~L~~dP~~R 496 (588)
. |+.++||||||+.++|+.+|+.||...... ..+.....|.+|.. +|++++++|..||++||.+|
T Consensus 253 ~------Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R 326 (364)
T KOG0581|consen 253 S------YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSER 326 (364)
T ss_pred c------CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccC
Confidence 6 556799999999999999999999774110 11223456777876 99999999999999999999
Q ss_pred CCHHHHHHHHhhhhhcCCccccCCCCChhHHHHHHHhh
Q psy4039 497 PSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLTL 534 (588)
Q Consensus 497 ps~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~~ 534 (588)
||+.|+++ |||++.......++..|+...
T Consensus 327 ~s~~qLl~---------Hpfi~~~~~~~vd~~~~~~~~ 355 (364)
T KOG0581|consen 327 PSAKQLLQ---------HPFIKKFEDPNVDMASFVRKA 355 (364)
T ss_pred CCHHHHhc---------CHHHhhcccccccHHHHHHHh
Confidence 99999999 999997766666676676643
No 4
>KOG0575|consensus
Probab=100.00 E-value=6e-50 Score=423.69 Aligned_cols=251 Identities=27% Similarity=0.379 Sum_probs=214.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|..++.||+|||+.||++++. |..||+|++.+.... + ...++.+.+||+|.+.| +|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-----------k---~~~reKv~~EIeIHr~L----~Hpn 79 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-----------K---PKQREKVLNEIEIHRSL----KHPN 79 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-----------C---cchHHHHHHHHHHHHhc----CCCc
Confidence 56999999999999999999994 899999999653222 1 12455677899999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++|+|.. ++|+|+|+| +++|..+++.+ ..++|.+++.+++||+.|
T Consensus 80 IV~f~~~FEDs~----------------------------nVYivLELC~~~sL~el~Krr-k~ltEpEary~l~QIv~G 130 (592)
T KOG0575|consen 80 IVQFYHFFEDSN----------------------------NVYIVLELCHRGSLMELLKRR-KPLTEPEARYFLRQIVEG 130 (592)
T ss_pred EEeeeeEeecCC----------------------------ceEEEEEecCCccHHHHHHhc-CCCCcHHHHHHHHHHHHH
Confidence 999999999853 599999999 69999999844 499999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+|||||..|+|++++ .++||+|||+|......... ..+.||||.|+|||++.....
T Consensus 131 lkYLH~~~IiHRDLKLGNlfL~~~-----~~VKIgDFGLAt~le~~~Er-----k~TlCGTPNYIAPEVl~k~gH----- 195 (592)
T KOG0575|consen 131 LKYLHSLGIIHRDLKLGNLFLNEN-----MNVKIGDFGLATQLEYDGER-----KKTLCGTPNYIAPEVLNKSGH----- 195 (592)
T ss_pred HHHHHhcCceecccchhheeecCc-----CcEEecccceeeeecCcccc-----cceecCCCcccChhHhccCCC-----
Confidence 999999999999999999999998 89999999999887643221 126899999999999987664
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
+..+||||+||+||.||+|++||........+.. .....+|..++.++++||.++|++||.+|||+++++.
T Consensus 196 -sfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~------ 268 (592)
T KOG0575|consen 196 -SFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD------ 268 (592)
T ss_pred -CCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc------
Confidence 3569999999999999999999988644444332 1223466789999999999999999999999999999
Q ss_pred hcCCcccc
Q psy4039 511 WAPKHWLY 518 (588)
Q Consensus 511 ~~~h~w~~ 518 (588)
|+|++
T Consensus 269 ---h~Ff~ 273 (592)
T KOG0575|consen 269 ---HPFFK 273 (592)
T ss_pred ---CHhhh
Confidence 99995
No 5
>KOG0603|consensus
Probab=100.00 E-value=3.8e-50 Score=427.52 Aligned_cols=333 Identities=20% Similarity=0.263 Sum_probs=270.0
Q ss_pred HHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccccchhh----H
Q psy4039 60 NARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSMASDLR----R 127 (588)
Q Consensus 60 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 127 (588)
-++.+|++||.|||+.| ++.|||+|.| ++|.+|++.||||++++-.. ++..||.+||..+|.+++ +
T Consensus 217 ~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~--~~~~fd~eft~~~P~dsp~~~~~ 294 (612)
T KOG0603|consen 217 LFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITER--DVAQFDPEFTSQVPADSPLLSAS 294 (612)
T ss_pred HHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchh--hhhhcCchhccCCcccCCCCCCC
Confidence 36799999999999998 9999999999 89999999999999998887 788899999999999876 6
Q ss_pred HhhhhhhccCCCCceeeeeeeeeccccccCCCcchhhhhhHHHHHHHhHhhhhhcccccCCCccccccCCeEEeeeeccc
Q psy4039 128 KTLQQLLYKDNSKPFLAFVGVSLASGTGILTKEDEFEGVCWEIRHAVNNMFDKLVQVETLPDVDDVKVDDIQIGKFIAKG 207 (588)
Q Consensus 128 ~~~~~~~~~~~s~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~IG~G 207 (588)
.+.|++|+| +.+++.. ++.. . .+. . ..++|.+...+|.|
T Consensus 295 ~s~~~if~g------~sfva~~------il~~--------------~----------~~~----~-~~~~y~~~~~~~~g 333 (612)
T KOG0603|consen 295 GSDHTIFSG------PSFVAPG------VLED--------------A----------VTA----P-FTESYEFREELGEG 333 (612)
T ss_pred ccccchhcC------CCccChH------Hhhc--------------c----------ccC----C-cchhhccccccCCC
Confidence 777888888 6665544 2211 0 000 0 12778888889999
Q ss_pred CceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeeeeccC
Q psy4039 208 TNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFTDFV 285 (588)
Q Consensus 208 ~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~ 285 (588)
+|++|-.|.+. ++..|||++.+. ..+..+|+.++... .+||||++++++|.+.
T Consensus 334 s~s~~~~~~~~~t~~~~~vkii~~~---------------------~~~~~~e~~~~~~~---~~h~niv~~~~v~~~~- 388 (612)
T KOG0603|consen 334 SFSAVKYCESSPTDQEPAVKIISKR---------------------ADDNQDEIPISLLV---RDHPNIVKSHDVYEDG- 388 (612)
T ss_pred Cccceeeeeccccccchhheecccc---------------------ccccccccchhhhh---cCCCcceeecceecCC-
Confidence 99999999987 789999999432 22334567666655 5899999999998773
Q ss_pred CCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q psy4039 286 PSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAHR 364 (588)
Q Consensus 286 ~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHr 364 (588)
.+.|+|||.++ +-|.+.+... +....++..|+++|+.|+.|||++|||||
T Consensus 389 ---------------------------~~~~~v~e~l~g~ell~ri~~~--~~~~~e~~~w~~~lv~Av~~LH~~gvvhR 439 (612)
T KOG0603|consen 389 ---------------------------KEIYLVMELLDGGELLRRIRSK--PEFCSEASQWAAELVSAVDYLHEQGVVHR 439 (612)
T ss_pred ---------------------------ceeeeeehhccccHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 25999999994 4555555444 23337888999999999999999999999
Q ss_pred cCCCCcEEEc-CCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHH
Q psy4039 365 DLKSDNILLD-CSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 443 (588)
Q Consensus 365 DLKp~NILld-~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~G 443 (588)
||||+|||++ +. ++++|+|||.++...... .+.+=|..|.|||++.... ++++|||||||
T Consensus 440 DLkp~NIL~~~~~-----g~lrltyFG~a~~~~~~~--------~tp~~t~~y~APEvl~~~~------yt~acD~WSLG 500 (612)
T KOG0603|consen 440 DLKPGNILLDGSA-----GHLRLTYFGFWSELERSC--------DTPALTLQYVAPEVLAIQE------YTEACDWWSLG 500 (612)
T ss_pred CCChhheeecCCC-----CcEEEEEechhhhCchhh--------cccchhhcccChhhhccCC------CCcchhhHHHH
Confidence 9999999996 44 799999999998765541 1345688999999998655 56889999999
Q ss_pred HHHHHHhcCCCCCcccccc-ccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 444 TVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 444 vil~ElltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++||+|++|+.||...... ........+.+...+|+++++||+.||+.||.+||+++++.. |||+
T Consensus 501 vlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~---------h~w~ 566 (612)
T KOG0603|consen 501 VLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA---------HPWF 566 (612)
T ss_pred HHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhcc---------Ccch
Confidence 9999999999999875444 233334555666899999999999999999999999999999 9999
No 6
>KOG0595|consensus
Probab=100.00 E-value=4.8e-48 Score=392.05 Aligned_cols=250 Identities=29% Similarity=0.438 Sum_probs=206.8
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.+.||.|+||+||+|+++ +..||||.|.+.... ....+....||+||+.+ +||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~---------------~k~~e~L~~Ei~iLkel----~H~ 69 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN---------------KKLVELLLSEIKILKEL----KHP 69 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC---------------HHHHHHHHHHHHHHHhc----CCc
Confidence 388999999999999999999998 889999999542211 11334456799999998 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||.+++++.+.. .+|+||||| +|+|.+||+.++ .+++..+..++.||+.
T Consensus 70 nIV~l~d~~~~~~----------------------------~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~ 120 (429)
T KOG0595|consen 70 NIVRLLDCIEDDD----------------------------FIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLAS 120 (429)
T ss_pred ceeeEEEEEecCC----------------------------eEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 9999999998742 599999999 589999999876 8999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCC-CCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSE-DNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~-~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
||++||+++||||||||.||||+... ......+||+|||+||....+... .+.||+|.|||||++..+.
T Consensus 121 alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a------~tlcGSplYMAPEV~~~~~---- 190 (429)
T KOG0595|consen 121 ALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMA------ETLCGSPLYMAPEVIMSQQ---- 190 (429)
T ss_pred HHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHH------HHhhCCccccCHHHHHhcc----
Confidence 99999999999999999999998762 222257999999999998764332 2689999999999997654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccccc-----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
|+.|+|+||+|+|+|+|++|++||......... .....+.++..++....+|+...|..+|.+|.+..+...
T Consensus 191 --YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 191 --YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred --ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhh
Confidence 668999999999999999999999864322111 123344455667777889999999999999999988766
No 7
>KOG0192|consensus
Probab=100.00 E-value=2.6e-47 Score=399.71 Aligned_cols=263 Identities=26% Similarity=0.360 Sum_probs=219.8
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEECCee-EEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFRGVE-YALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~-vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
...+.++.+++.+.+.||+|+||+||+|.++|.. ||||++...+.... ..+.|.+|+.+|.++
T Consensus 33 ~~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~---------------~~~~f~~E~~il~~l- 96 (362)
T KOG0192|consen 33 LPEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDE---------------SRKAFRREASLLSRL- 96 (362)
T ss_pred ccceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChH---------------HHHHHHHHHHHHHhC-
Confidence 3556777788888889999999999999999998 99999954322111 145678899999997
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH-hcCCCCHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE-RCAQLSMHERVL 344 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~-~~~~l~~~~~~~ 344 (588)
+|||||+++|+|.+.. + .+.+||||+ +|+|.+++.. +...+++..++.
T Consensus 97 ---~HpNIV~f~G~~~~~~----------------------~-----~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~ 146 (362)
T KOG0192|consen 97 ---RHPNIVQFYGACTSPP----------------------G-----SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLR 146 (362)
T ss_pred ---CCCCeeeEEEEEcCCC----------------------C-----ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHH
Confidence 9999999999998732 0 389999999 7999999988 355899999999
Q ss_pred HHHHHHHHHHHHHhCC-ceeccCCCCcEEEcCCCCCCCC-ceeeeccccccccCCCCccccccccccccCCccccchhHH
Q psy4039 345 LFTQLLEGVTHLNMHR-TAHRDLKSDNILLDCSEDNTCP-QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 422 (588)
Q Consensus 345 i~~ql~~gL~yLH~~~-IvHrDLKp~NILld~~~~~~~~-~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 422 (588)
++.||++||.|||+++ ||||||||+|||++.+ + ++||+|||+++...... ...+...||+.|||||++
T Consensus 147 ~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~-----~~~~KI~DFGlsr~~~~~~-----~~~~~~~GT~~wMAPEv~ 216 (362)
T KOG0192|consen 147 IALDIARGMEYLHSEGPIIHRDLKSDNILVDLK-----GKTLKIADFGLSREKVISK-----TSMTSVAGTYRWMAPEVL 216 (362)
T ss_pred HHHHHHHHHHHHhcCCCeeecccChhhEEEcCC-----CCEEEECCCccceeecccc-----ccccCCCCCccccChhhh
Confidence 9999999999999999 9999999999999988 5 99999999998765421 111136799999999999
Q ss_pred hcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc----cccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 423 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 423 ~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
.+. ...++.|+||||||+++|||+||+.||.+... ........+|.++..+++.+..||.+||+.||.+||+
T Consensus 217 ~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~ 292 (362)
T KOG0192|consen 217 RGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPS 292 (362)
T ss_pred cCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCC
Confidence 854 11267899999999999999999999987543 2222346677888889999999999999999999999
Q ss_pred HHHHHHHHhhhh
Q psy4039 499 AELAATVCQLYL 510 (588)
Q Consensus 499 ~~e~l~~L~~~~ 510 (588)
+.+++..|+.+.
T Consensus 293 f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 293 FLEIVSRLESIM 304 (362)
T ss_pred HHHHHHHHHHHH
Confidence 999999888664
No 8
>KOG0598|consensus
Probab=100.00 E-value=1.2e-47 Score=386.25 Aligned_cols=255 Identities=25% Similarity=0.384 Sum_probs=212.2
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
....++|++.++||+|+||+||.++.+ ++.||+|+|++..+... ........|..||..+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~--------------~e~~~~~~Er~IL~~v---- 82 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK--------------KEVRHTKAERNILSKI---- 82 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh--------------hhHHHHHHHHHHHHhC----
Confidence 566799999999999999999999887 88999999965332211 1233455689999987
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+||.||+++..|++.. .+|+|+||+ +|.|...|...+ .+++..+..++..
T Consensus 83 ~hPFiv~l~ysFQt~~----------------------------kLylVld~~~GGeLf~hL~~eg-~F~E~~arfYlaE 133 (357)
T KOG0598|consen 83 KHPFIVKLIYSFQTEE----------------------------KLYLVLDYLNGGELFYHLQREG-RFSEDRARFYLAE 133 (357)
T ss_pred CCCcEeeeEEecccCC----------------------------eEEEEEeccCCccHHHHHHhcC-CcchhHHHHHHHH
Confidence 9999999999998742 599999999 679999998765 8999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
|+.||.|||++|||||||||+|||||.+ ++++|+|||+|+..-.... .+.++|||+.|||||++.+.+
T Consensus 134 i~lAL~~LH~~gIiyRDlKPENILLd~~-----GHi~LtDFgL~k~~~~~~~-----~t~tfcGT~eYmAPEil~~~g-- 201 (357)
T KOG0598|consen 134 IVLALGYLHSKGIIYRDLKPENILLDEQ-----GHIKLTDFGLCKEDLKDGD-----ATRTFCGTPEYMAPEILLGKG-- 201 (357)
T ss_pred HHHHHHHHHhCCeeeccCCHHHeeecCC-----CcEEEeccccchhcccCCC-----ccccccCCccccChHHHhcCC--
Confidence 9999999999999999999999999999 9999999999986443211 122589999999999999886
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---ccccCCCCCCccHHHHHHHHHhhhhCCCCCC----CHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNALPQLNTNVPEVMRRLVAKLLENDPSDRP----SAEL 501 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp----s~~e 501 (588)
++..+|+||+||++|||++|.+||.+......+. ....+..+..++.+++++++++|+.||++|. ++.+
T Consensus 202 ----y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ 277 (357)
T KOG0598|consen 202 ----YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE 277 (357)
T ss_pred ----CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHH
Confidence 5677999999999999999999999865433332 2233445566899999999999999999996 5666
Q ss_pred HHHHHhhhhhcCCcccc
Q psy4039 502 AATVCQLYLWAPKHWLY 518 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~ 518 (588)
+.+ |||+.
T Consensus 278 ik~---------HpfF~ 285 (357)
T KOG0598|consen 278 IKR---------HPFFK 285 (357)
T ss_pred hhc---------Ccccc
Confidence 666 88876
No 9
>KOG0592|consensus
Probab=100.00 E-value=1.8e-47 Score=398.74 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=219.7
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.....+|.+++.||.|+|++|++|+.+ ++.||||++.+ +...+|. +.+.+.+|-.+|..| .
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K-----------~~Iike~---KvkYV~~Ek~~l~~L---~ 131 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK-----------RYIIKEK---KVKYVTREKEALTQL---S 131 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhH-----------HHHHhhc---ccchhhHHHHHHHHh---h
Confidence 345589999999999999999999998 89999999953 2223332 455667899999887 5
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
.||.||+||..|+|+. .+|+|+||+ +|+|.++|+.-+ .|++..++.++.+
T Consensus 132 ~hPgivkLy~TFQD~~----------------------------sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAe 182 (604)
T KOG0592|consen 132 GHPGIVKLYFTFQDEE----------------------------SLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAE 182 (604)
T ss_pred CCCCeEEEEEEeeccc----------------------------ceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHH
Confidence 8999999999999854 499999999 899999999876 9999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc------c--cccccccccCCccccchh
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM------Q--YSSADIELGGNVALMAPE 420 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~------~--~~~~~~~~~GT~~Y~APE 420 (588)
|+.||+|||++|||||||||+|||||.+ +++||+|||.|+.+...... + .++....++||..|++||
T Consensus 183 IldAleylH~~GIIHRDlKPENILLd~d-----mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPE 257 (604)
T KOG0592|consen 183 ILDALEYLHSNGIIHRDLKPENILLDKD-----GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPE 257 (604)
T ss_pred HHHHHHHHHhcCceeccCChhheeEcCC-----CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHH
Confidence 9999999999999999999999999999 89999999999987652211 1 111124689999999999
Q ss_pred HHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 421 VALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 421 ~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
++..+. .+..+|+|+||||+|.|+.|.+||.+......+.. .....++..+|+.+++||+++|..||.+|+|
T Consensus 258 lL~~~~------~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt 331 (604)
T KOG0592|consen 258 LLNDSP------AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLT 331 (604)
T ss_pred HhcCCC------CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCcccccc
Confidence 998776 34679999999999999999999988655444332 2334678899999999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCcccc
Q psy4039 499 AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~ 518 (588)
++++.+ ||||.
T Consensus 332 ~~qIk~---------HpFF~ 342 (604)
T KOG0592|consen 332 SQQIKA---------HPFFE 342 (604)
T ss_pred HHHHhh---------Ccccc
Confidence 999988 77776
No 10
>KOG0616|consensus
Probab=100.00 E-value=1e-45 Score=360.75 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=215.1
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
..+++|++.+.||.|+||.|..++.+ |..||+|++.+.. +++. ...+...+|..+|+.+ .
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------vVkl-------KQveH~~nEk~vL~~v----~ 102 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------VVKL-------KQVEHTHNEKRVLKAV----S 102 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-------HHHH-------HHHHHHhhHHHHHhhc----c
Confidence 78899999999999999999999998 8899999995321 1110 1223456799999988 8
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||.+++|++.|.|. .++|+||||. +|.|..+|+..+ ++++..++.++.||
T Consensus 103 ~PFlv~l~~t~~d~----------------------------~~lymvmeyv~GGElFS~Lrk~~-rF~e~~arFYAAei 153 (355)
T KOG0616|consen 103 HPFLVKLYGTFKDN----------------------------SNLYMVMEYVPGGELFSYLRKSG-RFSEPHARFYAAEI 153 (355)
T ss_pred CceeEEEEEeeccC----------------------------CeEEEEEeccCCccHHHHHHhcC-CCCchhHHHHHHHH
Confidence 99999999998874 2599999999 689999999876 99999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||+|||+.+|++|||||+|||||.+ +.+||+|||+|+..... +-+.||||.|+|||++...+
T Consensus 154 vlAleylH~~~iiYRDLKPENiLlD~~-----G~iKitDFGFAK~v~~r--------T~TlCGTPeYLAPEii~sk~--- 217 (355)
T KOG0616|consen 154 VLALEYLHSLDIIYRDLKPENLLLDQN-----GHIKITDFGFAKRVSGR--------TWTLCGTPEYLAPEIIQSKG--- 217 (355)
T ss_pred HHHHHHHHhcCeeeccCChHHeeeccC-----CcEEEEeccceEEecCc--------EEEecCCccccChHHhhcCC---
Confidence 999999999999999999999999998 99999999999886543 12689999999999999887
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc--ccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELA 502 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~ 502 (588)
++.++|.|||||++|||++|.+||+.+.....++.. ..-.+|..+++++++|+.++|+.|-.+|. ...++
T Consensus 218 ---ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dI 294 (355)
T KOG0616|consen 218 ---YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDI 294 (355)
T ss_pred ---CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCcccc
Confidence 557799999999999999999999997666555442 23357888999999999999999999993 45677
Q ss_pred HHHHhhhhhcCCcccc
Q psy4039 503 ATVCQLYLWAPKHWLY 518 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~ 518 (588)
.+ |||++
T Consensus 295 k~---------H~wF~ 301 (355)
T KOG0616|consen 295 KN---------HPWFK 301 (355)
T ss_pred cc---------Ccccc
Confidence 77 99997
No 11
>KOG0583|consensus
Probab=100.00 E-value=3.8e-45 Score=386.24 Aligned_cols=260 Identities=25% Similarity=0.361 Sum_probs=211.5
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
...+.|.+++.||+|+||+|+.|.+. +..||||++........ . ....+.+.+|+.+++.+ ..
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~-----------~-~~~~~~i~rEi~~~~~~---~~ 78 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSK-----------S-QKLDELIKREISILRRL---RS 78 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhccccc-----------c-cccchhhHHHHHHHHHh---cc
Confidence 44589999999999999999999886 89999997743211100 0 11233445799999988 23
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||||+++++++.... .+|+||||+ +|+|.+++.+. .++.+.++..+++|+
T Consensus 79 HpnI~~l~ev~~t~~----------------------------~~~ivmEy~~gGdL~~~i~~~-g~l~E~~ar~~F~Ql 129 (370)
T KOG0583|consen 79 HPNIIRLLEVFATPT----------------------------KIYIVMEYCSGGDLFDYIVNK-GRLKEDEARKYFRQL 129 (370)
T ss_pred CCCEeEEEEEEecCC----------------------------eEEEEEEecCCccHHHHHHHc-CCCChHHHHHHHHHH
Confidence 999999999998742 399999999 67999999984 499999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC-CCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK-SGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~-~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
+.|++|||++||+||||||+|||+|.+. +++||+|||++.... .+.. ..+.+||+.|+|||++.+...
T Consensus 130 isav~y~H~~gi~HRDLK~ENilld~~~----~~~Kl~DFG~s~~~~~~~~~------l~t~cGsp~Y~aPEvl~~~~~- 198 (370)
T KOG0583|consen 130 ISAVAYCHSRGIVHRDLKPENILLDGNE----GNLKLSDFGLSAISPGEDGL------LKTFCGSPAYAAPEVLSGKGT- 198 (370)
T ss_pred HHHHHHHHhCCEeeCCCCHHHEEecCCC----CCEEEeccccccccCCCCCc------ccCCCCCcccCCHHHhCCCCC-
Confidence 9999999999999999999999999873 589999999998773 2211 126899999999999987651
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCc-cHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNV-PEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~-~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
+.+.++||||+||+||.|++|+.||........+.. .....+|..+ ++++++|+.+||..||.+|+|+.++++
T Consensus 199 ---Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~- 274 (370)
T KOG0583|consen 199 ---YSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE- 274 (370)
T ss_pred ---cCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh-
Confidence 135789999999999999999999988543322222 2223456677 999999999999999999999999998
Q ss_pred HhhhhhcCCccccC
Q psy4039 506 CQLYLWAPKHWLYG 519 (588)
Q Consensus 506 L~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 275 --------h~w~~~ 280 (370)
T KOG0583|consen 275 --------HPWFQK 280 (370)
T ss_pred --------Chhhcc
Confidence 999996
No 12
>KOG0661|consensus
Probab=100.00 E-value=2e-46 Score=385.47 Aligned_cols=257 Identities=25% Similarity=0.371 Sum_probs=209.9
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.++||.|+||.||+|+.. +..||||.|++.- .........||+..|+++ ..||
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf----------------~s~ee~~nLREvksL~kl---n~hp 69 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKF----------------YSWEECMNLREVKSLRKL---NPHP 69 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhh----------------ccHHHHHHHHHHHHHHhc---CCCC
Confidence 478999999999999999999987 7889999985311 112333446799999887 3499
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|||++.+++.+.. ..+|+|||||+++|.+++++++..|++.++..|+.||++|
T Consensus 70 niikL~Evi~d~~---------------------------~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 70 NIIKLKEVIRDND---------------------------RILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred cchhhHHHhhccC---------------------------ceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 9999999998742 1599999999999999999988789999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|+|+|.+|+.|||+||+|||+... ..+||+|||+||..... .+++ ..+.|.+|.|||++.... .
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~~-----~~iKiaDFGLARev~Sk--pPYT----eYVSTRWYRAPEvLLrs~-----~ 186 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISGN-----DVIKIADFGLAREVRSK--PPYT----EYVSTRWYRAPEVLLRSG-----Y 186 (538)
T ss_pred HHHHHhcCcccccCChhheEeccc-----ceeEecccccccccccC--CCcc----hhhhcccccchHHhhhcc-----c
Confidence 999999999999999999999965 69999999999987653 2333 678899999999998664 2
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---------------------------ccc-----cccCCCCCCccHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---------------------------YEV-----NALPQLNTNVPEV 480 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---------------------------~~~-----~~~~~~~~~~~~~ 480 (588)
|+.+.||||+|||++|+.+-++.|.+..+... +.. .....+-.+++++
T Consensus 187 Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~ 266 (538)
T KOG0661|consen 187 YSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSE 266 (538)
T ss_pred cCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHH
Confidence 66789999999999999999999977311100 000 1111122457899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
+.+||.+||.+||++||||+|+++ |||++...+
T Consensus 267 ~~~li~~ll~WDP~kRpTA~~al~---------~pffq~~~~ 299 (538)
T KOG0661|consen 267 AASLIERLLAWDPDKRPTASQALQ---------HPFFQVGRA 299 (538)
T ss_pred HHHHHHHHhcCCCccCccHHHHhc---------Ccccccccc
Confidence 999999999999999999999999 999994433
No 13
>KOG0588|consensus
Probab=100.00 E-value=1.9e-45 Score=390.57 Aligned_cols=254 Identities=25% Similarity=0.399 Sum_probs=218.4
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+.-|++++.||+|+-|.|..|++. |+.+|||++.+.. +........+.+||.||+.+ .||
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~--------------~~s~s~~~~IerEIviMkLi----~Hp 72 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS--------------ELSSSQPAGIEREIVIMKLI----EHP 72 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeecccc--------------ccccccccchhhhhHHHHHh----cCC
Confidence 377899999999999999999997 9999999996432 11222334567899999887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++|+++++.. .+|+|+||+ +|.|++++-.++ .+++.++++++.||+.
T Consensus 73 nVl~LydVwe~~~----------------------------~lylvlEyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~ 123 (786)
T KOG0588|consen 73 NVLRLYDVWENKQ----------------------------HLYLVLEYVPGGELFDYLVRKG-PLPEREAAHFFRQILD 123 (786)
T ss_pred CeeeeeeeeccCc----------------------------eEEEEEEecCCchhHHHHHhhC-CCCCHHHHHHHHHHHH
Confidence 9999999998743 599999999 789999998876 9999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
|+.|+|..+|+||||||+|+|||.. .++||+|||+|.....+.... +.||+|.|.|||++.+.++
T Consensus 124 gv~yCH~~~icHRDLKpENlLLd~~-----~nIKIADFGMAsLe~~gklLe------TSCGSPHYA~PEIV~G~pY---- 188 (786)
T KOG0588|consen 124 GVSYCHAFNICHRDLKPENLLLDVK-----NNIKIADFGMASLEVPGKLLE------TSCGSPHYAAPEIVSGRPY---- 188 (786)
T ss_pred HHHHHhhhcceeccCCchhhhhhcc-----cCEeeeccceeecccCCcccc------ccCCCcccCCchhhcCCCC----
Confidence 9999999999999999999999988 789999999998765554433 5689999999999999885
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc--ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++||||+|||||-||+|+.||.++.....+... ...++|..+|+++++|+.+||..||++|+|++++++
T Consensus 189 -dG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k----- 262 (786)
T KOG0588|consen 189 -DGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK----- 262 (786)
T ss_pred -CCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhh-----
Confidence 567899999999999999999999987554444332 233567899999999999999999999999999999
Q ss_pred hhcCCccccCC
Q psy4039 510 LWAPKHWLYGA 520 (588)
Q Consensus 510 ~~~~h~w~~~~ 520 (588)
|||+...
T Consensus 263 ----HP~l~g~ 269 (786)
T KOG0588|consen 263 ----HPFLSGY 269 (786)
T ss_pred ----CchhhcC
Confidence 9999943
No 14
>KOG0593|consensus
Probab=100.00 E-value=5.5e-46 Score=363.23 Aligned_cols=252 Identities=21% Similarity=0.264 Sum_probs=205.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|+...++|+|+||+||+|+++ |+.||||++...+ -.+.-++-..+||++|+++ +|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese---------------dd~~VkKIAlREIrmLKqL----kH~N 62 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE---------------DDPVVKKIALREIRMLKQL----KHEN 62 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC---------------ccHHHHHHHHHHHHHHHhc----ccch
Confidence 56888899999999999999998 8999999984211 1112234456799999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+|.|+++|... ..+++|+|||+.++.+-|......++...+.+++.|++.|+
T Consensus 63 LVnLiEVFrrk----------------------------rklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai 114 (396)
T KOG0593|consen 63 LVNLIEVFRRK----------------------------RKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAI 114 (396)
T ss_pred HHHHHHHHHhc----------------------------ceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHh
Confidence 99999999763 24999999999888888877766899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|+|++++|||||||+||||+.+ +.+||||||+|+.+..... .| ++.+.|.+|.|||++.+... |
T Consensus 115 ~~cHk~n~IHRDIKPENILit~~-----gvvKLCDFGFAR~L~~pgd-~Y----TDYVATRWYRaPELLvGDtq-----Y 179 (396)
T KOG0593|consen 115 HFCHKNNCIHRDIKPENILITQN-----GVVKLCDFGFARTLSAPGD-NY----TDYVATRWYRAPELLVGDTQ-----Y 179 (396)
T ss_pred hhhhhcCeecccCChhheEEecC-----CcEEeccchhhHhhcCCcc-hh----hhhhhhhhccChhhhcccCc-----C
Confidence 99999999999999999999998 8999999999998764211 12 36789999999999988642 6
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccc------------------------cccccccccCCC---------CCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSAR------------------------NTDYEVNALPQL---------NTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~------------------------~~~~~~~~~~~~---------~~~~~~~ 480 (588)
+..+||||+||++.||++|.+.|.+... +..+.....|+. ...++.-
T Consensus 180 G~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~ 259 (396)
T KOG0593|consen 180 GKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNV 259 (396)
T ss_pred CCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHH
Confidence 6789999999999999999999987311 111111112211 1345667
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+.|++++||+.||++|++.+|++. |++|.
T Consensus 260 ~ld~~k~cL~~dP~~R~sc~qll~---------H~yFd 288 (396)
T KOG0593|consen 260 LLDLLKKCLKMDPDDRLSCEQLLH---------HPYFD 288 (396)
T ss_pred HHHHHHHHhcCCccccccHHHHhc---------ChHHH
Confidence 899999999999999999999998 99883
No 15
>KOG0591|consensus
Probab=100.00 E-value=4.2e-47 Score=367.74 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=206.2
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
..++.+|++.+.||+|+||.||++.+. |..||.|.|. . ..+....+++...|+.+|++|
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~-f--------------~~md~k~rq~~v~Ei~lLkQL---- 75 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQ-F--------------GMMDAKARQDCVKEISLLKQL---- 75 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcc-h--------------hhccHHHHHHHHHHHHHHHhc----
Confidence 344578999999999999999999886 8999999984 1 122233456667899999998
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLL 345 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i 345 (588)
+|||||+++++-... .+..+++|||+| .|+|.+.++. ....+++..+|++
T Consensus 76 ~HpNIVqYy~~~f~~--------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~ 129 (375)
T KOG0591|consen 76 NHPNIVQYYAHSFIE--------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKY 129 (375)
T ss_pred CCchHHHHHHHhhhc--------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHH
Confidence 999999998743221 122489999999 6999999873 3457999999999
Q ss_pred HHHHHHHHHHHHh--CC--ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhH
Q psy4039 346 FTQLLEGVTHLNM--HR--TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 421 (588)
Q Consensus 346 ~~ql~~gL~yLH~--~~--IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 421 (588)
+.|++.||.++|+ .. |+||||||.||+|+.+ +.+||+|||+++.+..... .....+|||.||+||.
T Consensus 130 f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~-----gvvKLGDfGL~r~l~s~~t-----fA~S~VGTPyYMSPE~ 199 (375)
T KOG0591|consen 130 FVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN-----GVVKLGDFGLGRFLSSKTT-----FAHSLVGTPYYMSPER 199 (375)
T ss_pred HHHHHHHHHHHhccccccceeeccCcchheEEcCC-----CceeeccchhHhHhcchhH-----HHHhhcCCCcccCHHH
Confidence 9999999999999 45 9999999999999988 8999999999999876432 2236899999999999
Q ss_pred HhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc---cccccccccCCCC-CCccHHHHHHHHHhhhhCCCCCC
Q psy4039 422 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR---NTDYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDRP 497 (588)
Q Consensus 422 l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~---~~~~~~~~~~~~~-~~~~~~l~~Li~~~L~~dP~~Rp 497 (588)
+...+ ++.||||||+||++|||+.-.+||+++.. ...+.....+++| ..+|.++..||..|+..||+.||
T Consensus 200 i~~~~------Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP 273 (375)
T KOG0591|consen 200 IHESG------YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRP 273 (375)
T ss_pred HhcCC------CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCC
Confidence 99887 56899999999999999999999998632 2233445666677 67899999999999999999999
Q ss_pred CHHHHHH
Q psy4039 498 SAELAAT 504 (588)
Q Consensus 498 s~~e~l~ 504 (588)
+.-..+.
T Consensus 274 ~t~~~v~ 280 (375)
T KOG0591|consen 274 DTVPYVQ 280 (375)
T ss_pred CcchHHH
Confidence 8544433
No 16
>KOG0600|consensus
Probab=100.00 E-value=3.1e-45 Score=379.24 Aligned_cols=262 Identities=23% Similarity=0.292 Sum_probs=215.0
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
.+.....+.|+..++||+|+||.||+|++. |+.||+|+++-..... ..-....+||.||++|
T Consensus 110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~---------------~~~~t~~REI~ILr~l- 173 (560)
T KOG0600|consen 110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE---------------GFPITAIREIKILRRL- 173 (560)
T ss_pred cccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCC---------------cchHHHHHHHHHHHhc-
Confidence 334445588999999999999999999997 8899999996322111 1223446799999998
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
.|||||+|.+..++.. .+++|+|+|||+.+|..++...+..|++.++..++
T Consensus 174 ---~HpNIikL~eivt~~~--------------------------~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~m 224 (560)
T KOG0600|consen 174 ---DHPNIIKLEEIVTSKL--------------------------SGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYM 224 (560)
T ss_pred ---CCCcccceeeEEEecC--------------------------CceEEEEEecccchhhhhhcCCCcccChHHHHHHH
Confidence 9999999999988741 23599999999999999999887899999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
+||+.||+|||++||+|||||.+|||||.+ +.+||+|||+|+.+......+++ ..+-|++|.|||++.+..
T Consensus 225 kQLl~Gl~~cH~~gvlHRDIK~SNiLidn~-----G~LKiaDFGLAr~y~~~~~~~~T----~rVvTLWYRpPELLLG~t 295 (560)
T KOG0600|consen 225 KQLLEGLEYCHSRGVLHRDIKGSNILIDNN-----GVLKIADFGLARFYTPSGSAPYT----SRVVTLWYRPPELLLGAT 295 (560)
T ss_pred HHHHHHHHHHhhcCeeeccccccceEEcCC-----CCEEeccccceeeccCCCCcccc----cceEEeeccChHHhcCCc
Confidence 999999999999999999999999999988 99999999999987765544444 466799999999999876
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccc---------------ccccccccC----------------CCCC
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN---------------TDYEVNALP----------------QLNT 475 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~---------------~~~~~~~~~----------------~~~~ 475 (588)
. |+.++|+||+||||.||+.|++.|.+.... ..+....+| +...
T Consensus 296 ~-----Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 296 S-----YGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred c-----cccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 3 678899999999999999999999873111 111111111 0123
Q ss_pred CccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 476 NVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 476 ~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.+|+.+.+|+..||..||++|.|+.++++ ++||.
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~---------seyF~ 404 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQ---------SEYFT 404 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhc---------Ccccc
Confidence 56888999999999999999999999999 89985
No 17
>KOG0197|consensus
Probab=100.00 E-value=4.6e-45 Score=382.96 Aligned_cols=258 Identities=22% Similarity=0.296 Sum_probs=216.2
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEECCe-eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFRGV-EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~-~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
...|++.-+.+.+.+.||+|.||.|+.|.+++. .||||.+... .+..+.|.+|+.+|++|
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~------------------~m~~~~f~~Ea~iMk~L- 258 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG------------------SMSPEAFLREAQIMKKL- 258 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc------------------ccChhHHHHHHHHHHhC-
Confidence 566788888899999999999999999999976 9999999542 22446677899999998
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH-hcCCCCHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE-RCAQLSMHERVL 344 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~-~~~~l~~~~~~~ 344 (588)
+|+|||+++++|..+.| +||||||+ .|+|.+||+. .+..++..+.+.
T Consensus 259 ---~H~~lV~l~gV~~~~~p----------------------------iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~ 307 (468)
T KOG0197|consen 259 ---RHEKLVKLYGVCTKQEP----------------------------IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLD 307 (468)
T ss_pred ---cccCeEEEEEEEecCCc----------------------------eEEEEEecccCcHHHHhhhcCCCccchHHHHH
Confidence 99999999999987532 99999999 7999999997 456899999999
Q ss_pred HHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhc
Q psy4039 345 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 345 i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
++.|||+|++||+++++|||||-+.|||++++ ..+||+|||+||...++...... ..--.+.|.|||.+..
T Consensus 308 ~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~-----~~vKIsDFGLAr~~~d~~Y~~~~----~~kfPIkWtAPEa~~~ 378 (468)
T KOG0197|consen 308 FAAQIAEGMAYLESKNYIHRDLAARNILVDED-----LVVKISDFGLARLIGDDEYTASE----GGKFPIKWTAPEALNY 378 (468)
T ss_pred HHHHHHHHHHHHHhCCccchhhhhhheeeccC-----ceEEEcccccccccCCCceeecC----CCCCCceecCHHHHhh
Confidence 99999999999999999999999999999988 89999999999965543221111 1123568999999987
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 500 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~ 500 (588)
.. ++.|||||||||+||||+| |+.||.+...... .+.+.+.+-|..||+++.++|..||+.+|++|||++
T Consensus 379 ~~------FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~ 452 (468)
T KOG0197|consen 379 GK------FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFE 452 (468)
T ss_pred CC------cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHH
Confidence 65 5689999999999999998 7888877433222 234455567889999999999999999999999999
Q ss_pred HHHHHHhhhh
Q psy4039 501 LAATVCQLYL 510 (588)
Q Consensus 501 e~l~~L~~~~ 510 (588)
.+...+..+.
T Consensus 453 ~L~~~l~~~~ 462 (468)
T KOG0197|consen 453 TLREVLEDFF 462 (468)
T ss_pred HHHHHHHHhh
Confidence 8888777554
No 18
>KOG0585|consensus
Probab=100.00 E-value=2e-45 Score=377.61 Aligned_cols=280 Identities=20% Similarity=0.279 Sum_probs=213.3
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhh--cccccchhhhHHHHHh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKEL--LPLRKPLRLNEDMLMN 263 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~--~~~~~~~~~~Ei~il~ 263 (588)
.......+++|++++.||+|.||.|-+|++. ++.||||++.+.....+. .+.... .....+...+||.||+
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~-----~~~~~~a~~~~~~ekv~~EIailK 163 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQY-----GFPRQPAMKLMPIEKVRREIAILK 163 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhc-----ccccccccccCcHHHHHHHHHHHH
Confidence 4556677899999999999999999999997 889999999653322110 011111 1112246788999999
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHH
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHER 342 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~ 342 (588)
++ .|||||+|+++..|.. ...+|||+|||. |.+...=.+ ...+++.++
T Consensus 164 kl----~H~nVV~LiEvLDDP~--------------------------s~~~YlVley~s~G~v~w~p~d-~~els~~~A 212 (576)
T KOG0585|consen 164 KL----HHPNVVKLIEVLDDPE--------------------------SDKLYLVLEYCSKGEVKWCPPD-KPELSEQQA 212 (576)
T ss_pred hc----CCcCeeEEEEeecCcc--------------------------cCceEEEEEeccCCccccCCCC-cccccHHHH
Confidence 98 9999999999987742 235999999994 654322111 223999999
Q ss_pred HHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHH
Q psy4039 343 VLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 422 (588)
Q Consensus 343 ~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 422 (588)
++++++++.||+|||.+|||||||||+|+||+++ +++||+|||.+.....+............+|||+|||||.+
T Consensus 213 r~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~-----g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c 287 (576)
T KOG0585|consen 213 RKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD-----GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELC 287 (576)
T ss_pred HHHHHHHHHHHHHHHhcCeeccccchhheEEcCC-----CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhh
Confidence 9999999999999999999999999999999998 89999999999876544222211122246899999999999
Q ss_pred hcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccC--CCC--CCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 423 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALP--QLN--TNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 423 ~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~--~~~--~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
.+....+ ..+.+.||||+||+||.|+.|+.||.++.....+...... .+| ..+.++++|||.+||.+||++|++
T Consensus 288 ~~~~~~~--~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 288 SGGNSFS--YSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRIT 365 (576)
T ss_pred cCCCCcc--ccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheee
Confidence 8754311 1456789999999999999999999986544433322111 122 246789999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCccccC
Q psy4039 499 AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~~ 519 (588)
..++.. |||...
T Consensus 366 l~~ik~---------Hpwvt~ 377 (576)
T KOG0585|consen 366 LPDIKL---------HPWVTR 377 (576)
T ss_pred hhhhee---------cceecc
Confidence 999988 999983
No 19
>KOG0198|consensus
Probab=100.00 E-value=4.6e-45 Score=372.57 Aligned_cols=259 Identities=23% Similarity=0.299 Sum_probs=208.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.++..++.||+|+||.||++.+. |...|||.+...+ .. ..+.+.+|+.+|.++ +|||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~----~~-------------~~~~l~~Ei~iL~~l----~~p~ 75 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED----SP-------------TSESLEREIRILSRL----NHPN 75 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc----ch-------------hHHHHHHHHHHHHhC----CCCC
Confidence 56888899999999999999997 6899999984321 00 033456799999998 7999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++|...... + ..++++|||+ +|+|.+++...+..|++..+..+.+|+++|
T Consensus 76 IV~~~G~~~~~~----------------------~----~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~G 129 (313)
T KOG0198|consen 76 IVQYYGSSSSRE----------------------N----DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEG 129 (313)
T ss_pred EEeeCCcccccc----------------------C----eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 999998754321 0 2489999999 789999999875579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcC-CCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDC-SEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~-~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
|.|||++|||||||||+|||++. + +.+||+|||+++..... ...........||+.|||||++.....
T Consensus 130 L~ylHs~g~vH~DiK~~NiLl~~~~-----~~~KlaDFG~a~~~~~~--~~~~~~~~~~~Gtp~~maPEvi~~g~~---- 198 (313)
T KOG0198|consen 130 LAYLHSKGIVHCDIKPANILLDPSN-----GDVKLADFGLAKKLESK--GTKSDSELSVQGTPNYMAPEVIRNGEV---- 198 (313)
T ss_pred HHHHHhCCEeccCcccceEEEeCCC-----CeEEeccCccccccccc--cccccccccccCCccccCchhhcCCCc----
Confidence 99999999999999999999998 5 79999999999876531 111122235789999999999985211
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccc--ccc---ccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQS--ARN---TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~--~~~---~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
...++||||+||++.||+||.+||... ... ........|.+|..+|+++++++.+|+..||++||||+++++
T Consensus 199 -~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~-- 275 (313)
T KOG0198|consen 199 -ARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE-- 275 (313)
T ss_pred -CCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh--
Confidence 124799999999999999999999862 111 111123456888999999999999999999999999999999
Q ss_pred hhhhhcCCccccCCCC
Q psy4039 507 QLYLWAPKHWLYGATP 522 (588)
Q Consensus 507 ~~~~~~~h~w~~~~~~ 522 (588)
|||+....+
T Consensus 276 -------hpf~~~~~~ 284 (313)
T KOG0198|consen 276 -------HPFLKQNSI 284 (313)
T ss_pred -------Chhhhcccc
Confidence 999985544
No 20
>KOG0599|consensus
Probab=100.00 E-value=1.6e-45 Score=354.97 Aligned_cols=260 Identities=23% Similarity=0.397 Sum_probs=212.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|...+.||+|..++|.+|.++ +.++|+|+|........... .+++. +.-..|+.||+++ +.|||
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~-~~~~~--------EaT~~Ev~ILRqv---~GHP~ 84 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGET-PYEMR--------EATRQEISILRQV---MGHPY 84 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCcc-HHHHH--------HHHHHHHHHHHHh---cCCCc
Confidence 66778889999999999999987 88999999975443332222 22222 2234599999998 79999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++.++|+... .+|+|+|.| .|.|.+||.+.- .+++.....|++|+.+|
T Consensus 85 II~l~D~yes~s----------------------------F~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfeg 135 (411)
T KOG0599|consen 85 IIDLQDVYESDA----------------------------FVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEG 135 (411)
T ss_pred EEEeeeeccCcc----------------------------hhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHH
Confidence 999999998742 489999999 699999998864 89999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
++|||.++||||||||+|||+|++ .++||+|||+|..+..|.... ..||||+|+|||.+..+-..-.--
T Consensus 136 VeylHa~~IVHRDLKpENILlddn-----~~i~isDFGFa~~l~~GekLr------elCGTPgYLAPEtikC~m~e~~pG 204 (411)
T KOG0599|consen 136 VEYLHARNIVHRDLKPENILLDDN-----MNIKISDFGFACQLEPGEKLR------ELCGTPGYLAPETIKCSMYENHPG 204 (411)
T ss_pred HHHHHHhhhhhcccChhheeeccc-----cceEEeccceeeccCCchhHH------HhcCCCcccChhheeeecccCCCC
Confidence 999999999999999999999998 899999999999988765442 689999999999987542211111
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccc--------cccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQS--------ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~--------~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
|+..+|+||+|||||.|+.|.+||+.. +....+.. ..+-|.+++.+.+|||.+||+.||.+|.|++|+++
T Consensus 205 Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF--~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 205 YSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQF--RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccccc--CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 445699999999999999999999873 22233332 22456789999999999999999999999999999
Q ss_pred HHhhhhhcCCcccc
Q psy4039 505 VCQLYLWAPKHWLY 518 (588)
Q Consensus 505 ~L~~~~~~~h~w~~ 518 (588)
|||+.
T Consensus 283 ---------Hpff~ 287 (411)
T KOG0599|consen 283 ---------HPFFI 287 (411)
T ss_pred ---------ChHHH
Confidence 99994
No 21
>KOG0605|consensus
Probab=100.00 E-value=1.4e-44 Score=377.56 Aligned_cols=259 Identities=22% Similarity=0.344 Sum_probs=208.1
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.+.+++|++++.||+|+||.||.|+-+ |..+|+|++++.+.... + ...-+..|-.||...
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~----------~----Qv~hV~aERdiL~~~---- 198 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKK----------N----QVEHVRAERDILAEV---- 198 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhh----------h----hHHHHHHHHHHhhhc----
Confidence 667899999999999999999999987 89999999975332110 0 122344577788775
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
.+|+||+||..|++.. ++||||||. +|++..+|...+ .|++..+..++.+
T Consensus 199 ds~~vVKLyYsFQD~~----------------------------~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE 249 (550)
T KOG0605|consen 199 DSPWVVKLYYSFQDKE----------------------------YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAE 249 (550)
T ss_pred CCCcEEEEEEEecCCC----------------------------eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHH
Confidence 9999999999999843 599999999 689999998776 8999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCC-------------------cccccc----
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGL-------------------SMQYSS---- 405 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~-------------------~~~~~~---- 405 (588)
++.|+.-||..|+|||||||+|+|||.. |++||+|||+|..+.... ......
T Consensus 250 ~vlAI~~iH~~gyIHRDIKPdNlLiD~~-----GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (550)
T KOG0605|consen 250 TVLAIESIHQLGYIHRDIKPDNLLIDAK-----GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTP 324 (550)
T ss_pred HHHHHHHHHHcCcccccCChhheeecCC-----CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccc
Confidence 9999999999999999999999999998 999999999996432200 000000
Q ss_pred -------------------ccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc
Q psy4039 406 -------------------ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE 466 (588)
Q Consensus 406 -------------------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~ 466 (588)
.....+|||.|||||++.+.. ++..||+||+|||+||||.|.+||.++.....+.
T Consensus 325 ~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg------Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~r 398 (550)
T KOG0605|consen 325 RSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG------YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYR 398 (550)
T ss_pred cchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC------CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 012357999999999999887 4467999999999999999999999875544432
Q ss_pred c------cccCCCCCCccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCcccc
Q psy4039 467 V------NALPQLNTNVPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 467 ~------~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~w~~ 518 (588)
. ...-+-...++++++|||.+||. ||++|.. ++|+.. ||||+
T Consensus 399 kI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~---------HPfF~ 449 (550)
T KOG0605|consen 399 KIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK---------HPFFK 449 (550)
T ss_pred HHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc---------CCccc
Confidence 2 12222234677999999999999 9999975 778777 99998
No 22
>KOG0582|consensus
Probab=100.00 E-value=7.3e-44 Score=364.17 Aligned_cols=267 Identities=23% Similarity=0.296 Sum_probs=212.4
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
...+....++|++.+.||.|..++||+|++. +..||||++....... .-..+.+|+..|..+
T Consensus 18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~----------------~ld~l~kE~~~msl~ 81 (516)
T KOG0582|consen 18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN----------------DLDALRKEVQTMSLI 81 (516)
T ss_pred cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh----------------hHHHHHHHHHHhhhc
Confidence 3456677799999999999999999999997 8899999994322111 123345688888877
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERV 343 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~ 343 (588)
+|||||+++..|.... .+|+||.|| .||+.+.++.. ...++|..+.
T Consensus 82 ----~HPNIv~~~~sFvv~~----------------------------~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia 129 (516)
T KOG0582|consen 82 ----DHPNIVTYHCSFVVDS----------------------------ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIA 129 (516)
T ss_pred ----CCCCcceEEEEEEecc----------------------------eeEEeehhhcCCcHHHHHHHHccccccHHHHH
Confidence 9999999999998742 599999999 58999999875 4479999999
Q ss_pred HHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC-CCccccccccccccCCccccchhHH
Q psy4039 344 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS-GLSMQYSSADIELGGNVALMAPEVA 422 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~-~~~~~~~~~~~~~~GT~~Y~APE~l 422 (588)
.|++++++||.|||.+|.||||||+.||||+++ |.+||+|||.+...-. +....+. . .+++||+.|||||++
T Consensus 130 ~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~d-----G~VkLadFgvsa~l~~~G~R~~~r-f-~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 130 TILREVLKALDYLHQNGHIHRDVKAGNILIDSD-----GTVKLADFGVSASLFDSGDRQVTR-F-NTFVGTPCWMAPEVL 202 (516)
T ss_pred HHHHHHHHHHHHHHhcCceecccccccEEEcCC-----CcEEEcCceeeeeecccCceeeEe-e-ccccCcccccChHHh
Confidence 999999999999999999999999999999999 9999999998776444 3222211 1 468999999999997
Q ss_pred hcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc--cccccCC----------CCCCccHHHHHHHHHhhh
Q psy4039 423 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY--EVNALPQ----------LNTNVPEVMRRLVAKLLE 490 (588)
Q Consensus 423 ~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~--~~~~~~~----------~~~~~~~~l~~Li~~~L~ 490 (588)
.++... |+.|+||||||+++.||.+|..||..-...... .....|+ -...++..++++|..||+
T Consensus 203 ~q~~~G----YdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 203 MQQLHG----YDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred hhcccC----ccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhh
Confidence 665544 568999999999999999999999763222111 1111111 113456789999999999
Q ss_pred hCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 491 NDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 491 ~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
.||.+|||++++++ |+||+....
T Consensus 279 kDP~kRptAskLlk---------h~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLK---------HAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhc---------cHHHhhccc
Confidence 99999999999999 999985443
No 23
>KOG0578|consensus
Probab=100.00 E-value=1.4e-44 Score=380.18 Aligned_cols=251 Identities=26% Similarity=0.349 Sum_probs=211.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|..-.+||+|+.|.||.|... ++.||||+|.... ...++.+.+|+.+|+.. +|+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-----------------Q~~keLilnEi~Vm~~~----~H~N 331 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-----------------QPKKELLLNEILVMRDL----HHPN 331 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-----------------CCchhhhHHHHHHHHhc----cchH
Confidence 56888889999999999999887 7899999995322 12456677899999997 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||.+++.|--. +.+|+||||+ +|+|.+.+... .++|.++..|++++++|
T Consensus 332 iVnfl~Sylv~----------------------------deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~a 381 (550)
T KOG0578|consen 332 IVNFLDSYLVG----------------------------DELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQG 381 (550)
T ss_pred HHHHHHHhccc----------------------------ceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHH
Confidence 99999876542 3599999999 68999999877 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|+|||.+||+|||||.+|||++.+ +.+||+|||+|..+..... ...+.+|||.|||||++....
T Consensus 382 L~fLH~~gIiHrDIKSDnILL~~~-----g~vKltDFGFcaqi~~~~~-----KR~TmVGTPYWMAPEVvtrk~------ 445 (550)
T KOG0578|consen 382 LKFLHARGIIHRDIKSDNILLTMD-----GSVKLTDFGFCAQISEEQS-----KRSTMVGTPYWMAPEVVTRKP------ 445 (550)
T ss_pred HHHHHhcceeeeccccceeEeccC-----CcEEEeeeeeeeccccccC-----ccccccCCCCccchhhhhhcc------
Confidence 999999999999999999999988 8999999999988765432 223678999999999998877
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc-c--cccccC--CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-Y--EVNALP--QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-~--~~~~~~--~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|++|.||||||++++||+-|++||..+..... + .....| ..++.+++++++++.+||+.|+++|+++.++|+
T Consensus 446 YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~--- 522 (550)
T KOG0578|consen 446 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE--- 522 (550)
T ss_pred cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc---
Confidence 67899999999999999999999986432221 1 112222 345789999999999999999999999999999
Q ss_pred hhhhcCCccccCCCC
Q psy4039 508 LYLWAPKHWLYGATP 522 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~ 522 (588)
||||+...+
T Consensus 523 ------HpFl~~a~p 531 (550)
T KOG0578|consen 523 ------HPFLKMAKP 531 (550)
T ss_pred ------ChhhhhcCC
Confidence 999974444
No 24
>KOG0033|consensus
Probab=100.00 E-value=8.9e-46 Score=352.09 Aligned_cols=252 Identities=22% Similarity=0.360 Sum_probs=208.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|.|++||+|.+. |+.+|+|++.... |. ....+.+.+|+.|-+.| +|||
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k-----------~~----~~~~e~l~rEarIC~~L----qHP~ 71 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-----------LS----ARDFQKLEREARICRKL----QHPN 71 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhh-----------hc----cccHHHHHHHHHHHHhc----CCCc
Confidence 77999999999999999999987 8999999984211 11 12456677899998887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+|++.+.+. + ..|+|+|++ +++|..-|-.+. .+++..+...++||+++
T Consensus 72 IvrL~~ti~~~-----------------------~-----~~ylvFe~m~G~dl~~eIV~R~-~ySEa~aSH~~rQiLea 122 (355)
T KOG0033|consen 72 IVRLHDSIQEE-----------------------S-----FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILEA 122 (355)
T ss_pred Eeehhhhhccc-----------------------c-----eeEEEEecccchHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999877653 2 499999999 568877666553 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|+|.++|||||+||+|+|+.+.... .-+||+|||+|.....+.. ....+|||+|||||++...+
T Consensus 123 l~yCH~n~IvHRDvkP~nllLASK~~~--A~vKL~~FGvAi~l~~g~~------~~G~~GtP~fmaPEvvrkdp------ 188 (355)
T KOG0033|consen 123 LAYCHSNGIVHRDLKPENLLLASKAKG--AAVKLADFGLAIEVNDGEA------WHGFAGTPGYLSPEVLKKDP------ 188 (355)
T ss_pred HHHHHhcCceeccCChhheeeeeccCC--CceeecccceEEEeCCccc------cccccCCCcccCHHHhhcCC------
Confidence 999999999999999999999877443 4699999999988774321 22678999999999999887
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc------cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~------~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
++..+||||.|||||-|+.|++||+++.....++. ...++.++.+++++++||++||..||.+|+|+.|+++
T Consensus 189 y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~-- 266 (355)
T KOG0033|consen 189 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK-- 266 (355)
T ss_pred CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC--
Confidence 45679999999999999999999998533332221 2233467889999999999999999999999999999
Q ss_pred hhhhhcCCcccc
Q psy4039 507 QLYLWAPKHWLY 518 (588)
Q Consensus 507 ~~~~~~~h~w~~ 518 (588)
|||+.
T Consensus 267 -------HpWi~ 271 (355)
T KOG0033|consen 267 -------HPWIC 271 (355)
T ss_pred -------Cchhc
Confidence 99997
No 25
>KOG0580|consensus
Probab=100.00 E-value=8.7e-45 Score=345.06 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=220.7
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
.....+.+++|++++.||+|-||.||.|+.+ +..||+|++++..+ . .....+++.+|++|...|
T Consensus 14 ~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi-----------~---~~~v~~qlrREiEIqs~L 79 (281)
T KOG0580|consen 14 RATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI-----------L---KTQVEHQLRREIEIQSHL 79 (281)
T ss_pred ccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH-----------H---HhcchhhhhheeEeeccc
Confidence 4556788899999999999999999999998 77999999965221 1 112456678899999987
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERV 343 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~ 343 (588)
+||||+++|++|.|.. ..|+++||. +|+|...|.+. ..++++..++
T Consensus 80 ----~hpnilrlY~~fhd~~----------------------------riyLilEya~~gel~k~L~~~~~~~f~e~~~a 127 (281)
T KOG0580|consen 80 ----RHPNILRLYGYFHDSK----------------------------RIYLILEYAPRGELYKDLQEGRMKRFDEQRAA 127 (281)
T ss_pred ----CCccHHhhhhheeccc----------------------------eeEEEEEecCCchHHHHHHhcccccccccchh
Confidence 9999999999999854 399999999 69999999864 3479999999
Q ss_pred HHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHh
Q psy4039 344 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 423 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 423 (588)
.++.|+|.||.|+|.++||||||||+|+|++.. +.+||+|||-+...+.+. ..+.|||.-|.+||+..
T Consensus 128 ~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~-----~~lkiAdfGwsV~~p~~k-------R~tlcgt~dyl~pEmv~ 195 (281)
T KOG0580|consen 128 TYIKQLANALLYCHLKRVIHRDIKPENLLLGSA-----GELKIADFGWSVHAPSNK-------RKTLCGTLDYLPPEMVE 195 (281)
T ss_pred HHHHHHHHHHHHhccCCcccCCCCHHHhccCCC-----CCeeccCCCceeecCCCC-------ceeeecccccCCHhhcC
Confidence 999999999999999999999999999999988 899999999986654322 23689999999999998
Q ss_pred cCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc--ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 424 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 424 ~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
+.. .+..+|+|++|++.||++.|.+||........|... ..-.+|..++.+++|+|.+||..+|.+|.+..|
T Consensus 196 ~~~------hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~ 269 (281)
T KOG0580|consen 196 GRG------HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTE 269 (281)
T ss_pred CCC------ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHH
Confidence 776 456799999999999999999999987755555432 233467889999999999999999999999999
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||+..
T Consensus 270 v~~---------hpwI~a 278 (281)
T KOG0580|consen 270 VMD---------HPWIVA 278 (281)
T ss_pred Hhh---------hHHHHh
Confidence 999 999863
No 26
>KOG0659|consensus
Probab=100.00 E-value=9.7e-44 Score=342.35 Aligned_cols=253 Identities=24% Similarity=0.271 Sum_probs=207.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|...+.||+|.||+||+|++. |+.||||+|+....... ......+||+.|+.+ +|||
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdG---------------i~~talREIK~Lqel----~h~n 62 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDG---------------INRTALREIKLLQEL----KHPN 62 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccC---------------ccHHHHHHHHHHHHc----cCcc
Confidence 56888899999999999999997 89999999975433221 223346799999998 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
||.++++|-... .+.+|+||+..+|...++++...++..++..++.++++||
T Consensus 63 Ii~LiD~F~~~~----------------------------~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl 114 (318)
T KOG0659|consen 63 IIELIDVFPHKS----------------------------NLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGL 114 (318)
T ss_pred hhhhhhhccCCC----------------------------ceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence 999999986532 4899999999999999999877899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
+|||++.|+||||||.|+|++++ +.+||+|||+|+.+....... + ..+-|..|.|||++.|... |
T Consensus 115 ~y~H~~~IlHRDlKPnNLLis~~-----g~lKiADFGLAr~f~~p~~~~-~----~~V~TRWYRAPELLfGsr~-----Y 179 (318)
T KOG0659|consen 115 AYCHSKWILHRDLKPNNLLISSD-----GQLKIADFGLARFFGSPNRIQ-T----HQVVTRWYRAPELLFGSRQ-----Y 179 (318)
T ss_pred HHHHhhhhhcccCCccceEEcCC-----CcEEeecccchhccCCCCccc-c----cceeeeeccChHHhccchh-----c
Confidence 99999999999999999999998 899999999999987643321 1 2367889999999987653 5
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc------------------------cccc------cccCCCCCCccHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT------------------------DYEV------NALPQLNTNVPEVMRR 483 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~------------------------~~~~------~~~~~~~~~~~~~l~~ 483 (588)
+..+||||.|||+.||+-|.+-|.++.... ++.. .....+...+++++.|
T Consensus 180 g~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ld 259 (318)
T KOG0659|consen 180 GTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALD 259 (318)
T ss_pred CCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHH
Confidence 678999999999999999887776631110 1110 0011123456788999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 484 LVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 484 Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
|+.+||..||.+|++++|+++ |+||+.
T Consensus 260 Ll~~m~~ynP~~Rita~qaL~---------~~yf~~ 286 (318)
T KOG0659|consen 260 LLSKMLTYNPKKRITASQALK---------HPYFKS 286 (318)
T ss_pred HHHhhhccCchhcccHHHHhc---------chhhhc
Confidence 999999999999999999999 999984
No 27
>KOG0597|consensus
Probab=100.00 E-value=1.9e-44 Score=375.86 Aligned_cols=250 Identities=22% Similarity=0.309 Sum_probs=208.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||+||||+.+ .+.||+|.+.+..... + .-+.+.+|++|++.+ +|||
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~----------k-----~l~~l~~ev~i~r~l----kHpn 62 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE----------K-----ELKNLRQEVRILRSL----KHPN 62 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch----------H-----HHHHHHHHHHHHHhc----CCcc
Confidence 67888999999999999999988 6789999995432111 1 123456799999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
||.++++|+... .+|+|+||+-|+|..+|...+ .++|+++..|+.|++.||
T Consensus 63 iv~m~esfEt~~----------------------------~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL 113 (808)
T KOG0597|consen 63 IVEMLESFETSA----------------------------HLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSAL 113 (808)
T ss_pred hhhHHHhhcccc----------------------------eEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence 999999998743 599999999889999998765 999999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+|+|||+||.|||++.. +.+|+||||+|+....+..+ .+.+.|||.|||||+..++++
T Consensus 114 ~yLhs~rilhrd~kPqniLl~~~-----~~~KlcdFg~Ar~m~~~t~v-----ltsikGtPlYmAPElv~e~py------ 177 (808)
T KOG0597|consen 114 YYLHSNRILHRDMKPQNILLEKG-----GTLKLCDFGLARAMSTNTSV-----LTSIKGTPLYMAPELVEEQPY------ 177 (808)
T ss_pred HHHHhcCcccccCCcceeeecCC-----CceeechhhhhhhcccCcee-----eeeccCcccccCHHHHcCCCc------
Confidence 99999999999999999999988 89999999999987664332 235779999999999998874
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLW 511 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~ 511 (588)
+..+|+||+|||+|||++|++||+........+. ......|...+.++..++..+|.+||.+|.+..+++.
T Consensus 178 d~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~------- 250 (808)
T KOG0597|consen 178 DHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG------- 250 (808)
T ss_pred cchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc-------
Confidence 4569999999999999999999987533222211 1222334578999999999999999999999999777
Q ss_pred cCCcccc
Q psy4039 512 APKHWLY 518 (588)
Q Consensus 512 ~~h~w~~ 518 (588)
|||.+
T Consensus 251 --HpF~k 255 (808)
T KOG0597|consen 251 --HPFWK 255 (808)
T ss_pred --ChHHh
Confidence 77766
No 28
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.1e-43 Score=369.60 Aligned_cols=257 Identities=24% Similarity=0.347 Sum_probs=209.8
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
.....+.+++|++.+.||+|+||.||+|.+. ++.||||++...... . ....+.+.+|+.+++.+
T Consensus 10 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------~---~~~~~~~~~E~~~l~~l 75 (329)
T PTZ00263 10 PDTSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-----------K---MKQVQHVAQEKSILMEL 75 (329)
T ss_pred cccCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-----------h---hhhHHHHHHHHHHHHhC
Confidence 3455667799999999999999999999997 789999998531100 0 01224466799999987
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVL 344 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~ 344 (588)
+||||+++++++.+.. .+|+||||+ +|+|.+++.... .+++..+..
T Consensus 76 ----~hp~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~ 122 (329)
T PTZ00263 76 ----SHPFIVNMMCSFQDEN----------------------------RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKF 122 (329)
T ss_pred ----CCCCCCcEEEEEEcCC----------------------------EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHH
Confidence 9999999999987632 499999999 679999998764 789999999
Q ss_pred HHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhc
Q psy4039 345 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 345 i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+++...... ....||+.|+|||++.+
T Consensus 123 ~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~-----~~~kl~Dfg~~~~~~~~~--------~~~~gt~~y~aPE~~~~ 189 (329)
T PTZ00263 123 YHAELVLAFEYLHSKDIIYRDLKPENLLLDNK-----GHVKVTDFGFAKKVPDRT--------FTLCGTPEYLAPEVIQS 189 (329)
T ss_pred HHHHHHHHHHHHHHCCeeecCCCHHHEEECCC-----CCEEEeeccCceEcCCCc--------ceecCChhhcCHHHHcC
Confidence 99999999999999999999999999999987 899999999997654321 13579999999999976
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCC----
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS---- 498 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps---- 498 (588)
.. ++.++|||||||++|||++|..||.+......+. ......++..++..+++||.+||+.||.+||+
T Consensus 190 ~~------~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 263 (329)
T PTZ00263 190 KG------HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKG 263 (329)
T ss_pred CC------CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCC
Confidence 65 4578999999999999999999997643222111 12233456678999999999999999999997
Q ss_pred -HHHHHHHHhhhhhcCCccccC
Q psy4039 499 -AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 499 -~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++++++ |||+..
T Consensus 264 ~~~~ll~---------hp~f~~ 276 (329)
T PTZ00263 264 GVADVKN---------HPYFHG 276 (329)
T ss_pred CHHHHhc---------CCccCC
Confidence 789888 999974
No 29
>KOG0663|consensus
Probab=100.00 E-value=8.7e-44 Score=351.92 Aligned_cols=268 Identities=26% Similarity=0.338 Sum_probs=213.8
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
-.+++|+..+.|++|+||.||+|+++ +..||+|+++-.. .++..+.. ..+||.+|.++ +
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek------------ek~GFPIt---sLREIniLl~~----~ 133 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK------------EKEGFPIT---SLREINILLKA----R 133 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc------------ccCCCcch---hHHHHHHHHhc----C
Confidence 34588999999999999999999998 7899999985211 12222222 35799999998 8
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||||.+-++..... ...+|+|||||+.+|...+..-..++...++.-++.|++
T Consensus 134 H~NIV~vkEVVvG~~--------------------------~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL 187 (419)
T KOG0663|consen 134 HPNIVEVKEVVVGSN--------------------------MDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLL 187 (419)
T ss_pred CCCeeeeEEEEeccc--------------------------cceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHH
Confidence 999999998876521 235999999999999999998777999999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+|+.|||.+.|+|||||++|+|+... +.+||+|||+||.++.... +++ ..+-|.+|.|||++.+.+.
T Consensus 188 ~glk~lH~~wilHRDLK~SNLLm~~~-----G~lKiaDFGLAR~ygsp~k-~~T----~lVVTLWYRaPELLLG~~t--- 254 (419)
T KOG0663|consen 188 RGLKHLHDNWILHRDLKTSNLLLSHK-----GILKIADFGLAREYGSPLK-PYT----PLVVTLWYRAPELLLGAKT--- 254 (419)
T ss_pred HHHHHHhhceeEecccchhheeeccC-----CcEEecccchhhhhcCCcc-cCc----ceEEEeeecCHHHhcCCcc---
Confidence 99999999999999999999999988 8999999999999877532 233 5678999999999998763
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----------cccccC-----------------------CCCC-C
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----------EVNALP-----------------------QLNT-N 476 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----------~~~~~~-----------------------~~~~-~ 476 (588)
|+++.|+||+|||+.||+++++.|.+....... ....+| .++. .
T Consensus 255 --yst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~ 332 (419)
T KOG0663|consen 255 --YSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS 332 (419)
T ss_pred --cCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccc
Confidence 668899999999999999999999873111100 000111 1111 2
Q ss_pred ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC-CCCChhHHHH
Q psy4039 477 VPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG-ATPSHNEIMQ 529 (588)
Q Consensus 477 ~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~-~~~~~~~~~~ 529 (588)
+++...+|+..+|..||.+|.|++++++ |+|+.+ ..|.+.+.+.
T Consensus 333 lse~g~~Lln~llt~dP~kR~tA~~~L~---------h~~F~e~P~p~~P~~~P 377 (419)
T KOG0663|consen 333 LSEQGFDLLNKLLTYDPGKRITAEDGLK---------HEYFRETPLPIDPSMFP 377 (419)
T ss_pred cchhHHHHHHHHhccCccccccHHHhhc---------ccccccCCCCCChhhcC
Confidence 5688899999999999999999999999 999984 3444444433
No 30
>KOG4721|consensus
Probab=100.00 E-value=9.5e-44 Score=370.28 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=212.6
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
.+.|++.++....++-||.|+.|.||+|++.++.||||+++. .-..+|+-|++|
T Consensus 116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~e------------------------lkETdIKHLRkL-- 169 (904)
T KOG4721|consen 116 EELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRE------------------------LKETDIKHLRKL-- 169 (904)
T ss_pred hhhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhh------------------------hhhhhHHHHHhc--
Confidence 567999999999999999999999999999999999999731 112367778887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+|||||.+.|+|+... .++|||||| .|-|...|+..+ .++......+.
T Consensus 170 --kH~NII~FkGVCtqsP----------------------------cyCIiMEfCa~GqL~~VLka~~-~itp~llv~Ws 218 (904)
T KOG4721|consen 170 --KHPNIITFKGVCTQSP----------------------------CYCIIMEFCAQGQLYEVLKAGR-PITPSLLVDWS 218 (904)
T ss_pred --cCcceeeEeeeecCCc----------------------------eeEEeeeccccccHHHHHhccC-ccCHHHHHHHH
Confidence 9999999999998732 489999999 699999998765 88999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.+||.|+.|||.+.|||||||+-||||..+ ..+||+|||.++..... +....++||..|||||++...+
T Consensus 219 k~IA~GM~YLH~hKIIHRDLKSPNiLIs~~-----d~VKIsDFGTS~e~~~~------STkMSFaGTVaWMAPEvIrneP 287 (904)
T KOG4721|consen 219 KGIAGGMNYLHLHKIIHRDLKSPNILISYD-----DVVKISDFGTSKELSDK------STKMSFAGTVAWMAPEVIRNEP 287 (904)
T ss_pred HHhhhhhHHHHHhhHhhhccCCCceEeecc-----ceEEeccccchHhhhhh------hhhhhhhhhHhhhCHHHhhcCC
Confidence 999999999999999999999999999988 68999999999876542 1122689999999999999887
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.++|+|||||||+|||||||..||.+-.....+ .....-+.|..||+.++-||++||+..|..||++.++
T Consensus 288 ------csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqi 361 (904)
T KOG4721|consen 288 ------CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQI 361 (904)
T ss_pred ------cccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHH
Confidence 568999999999999999999999773222222 2233345678999999999999999999999999999
Q ss_pred HHHHhhh
Q psy4039 503 ATVCQLY 509 (588)
Q Consensus 503 l~~L~~~ 509 (588)
+.+|+.+
T Consensus 362 l~HldIa 368 (904)
T KOG4721|consen 362 LLHLDIA 368 (904)
T ss_pred HHHHhhc
Confidence 9977754
No 31
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-42 Score=355.93 Aligned_cols=252 Identities=22% Similarity=0.287 Sum_probs=199.9
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
.+++|++.+.||.|+||.||+|.+. +..||+|.+...... .....+.+|+.+++.+ +|
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h 62 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----------------GAPCTAIREVSLLKNL----KH 62 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC----------------CcchhHHHHHHHHHhC----CC
Confidence 3588999999999999999999986 789999998532111 0123445799999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||+++++++.+.. ..++||||+.|+|.+++...+..+++..+..++.||+.
T Consensus 63 ~niv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~ 114 (288)
T cd07871 63 ANIVTLHDIIHTER----------------------------CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLR 114 (288)
T ss_pred CCEeeEEEEEcCCC----------------------------eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999987531 48999999999999999876656899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||+|||++||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+...
T Consensus 115 aL~~LH~~~ivH~dlkp~Nil~~~~-----~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~---- 180 (288)
T cd07871 115 GLSYCHKRKILHRDLKPQNLLINEK-----GELKLADFGLARAKSVPTK-----TYSNEVVTLWYRPPDVLLGSTE---- 180 (288)
T ss_pred HHHHHHhCCcccCCCCHHHEEECCC-----CCEEECcCcceeeccCCCc-----cccCceecccccChHHhcCCcc----
Confidence 9999999999999999999999987 7899999999976533211 1123568999999999865321
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccc------------------------cccccC--------CCCCCccH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------------------------EVNALP--------QLNTNVPE 479 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------------------------~~~~~~--------~~~~~~~~ 479 (588)
++.++||||+||++|||++|++||.+....... .....+ .....+++
T Consensus 181 -~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T cd07871 181 -YSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDT 259 (288)
T ss_pred -cCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCH
Confidence 456899999999999999999999653211000 000000 01234678
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++++|+.+||+.||.+|||++|+++ ||||
T Consensus 260 ~~~dll~~mL~~dp~~R~t~~~~l~---------hp~f 288 (288)
T cd07871 260 DGIDLLSSLLLYETKSRISAEAALR---------HSYF 288 (288)
T ss_pred HHHHHHHHhcCcCcccCCCHHHHhc---------CCCC
Confidence 8999999999999999999999999 9996
No 32
>KOG0032|consensus
Probab=100.00 E-value=1.3e-42 Score=367.09 Aligned_cols=256 Identities=24% Similarity=0.398 Sum_probs=214.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|++++.||+|.||.||+|+.+ |+.+|+|++.+...... .....+.+|+.||+++ ..|||
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~--------------~~~~~v~~Ev~il~~l---~~hpn 97 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK--------------EDREDVRREVAILQQL---SGHPN 97 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc--------------ccHHHHHHHHHHHHhc---cCCCC
Confidence 67999999999999999999998 88999999965332211 0335678899999998 34999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++|++.. .+++|||++ +|.|.+.+... .+++..+..++.|++.+
T Consensus 98 iv~l~~~~e~~~----------------------------~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~a 147 (382)
T KOG0032|consen 98 IVQLKDAFEDPD----------------------------SVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEA 147 (382)
T ss_pred EEEEEEEEEcCC----------------------------eEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHH
Confidence 999999999843 599999999 68999999876 49999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|||+.||+||||||+|+|+.....+. +.+|++|||+|.....+... ...+||+.|+|||++.+.+
T Consensus 148 v~~lH~~gvvHrDlKpEN~L~~~~~~~~-~~ik~~DFGla~~~~~~~~~------~~~~Gtp~y~APEvl~~~~------ 214 (382)
T KOG0032|consen 148 VKYLHSLGVVHRDLKPENLLLASKDEGS-GRIKLIDFGLAKFIKPGERL------HTIVGTPEYVAPEVLGGRP------ 214 (382)
T ss_pred HHHHHhCCceeccCCHHHeeeccccCCC-CcEEEeeCCCceEccCCceE------eeecCCccccCchhhcCCC------
Confidence 9999999999999999999998774333 58999999999887652221 2688999999999998655
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc------ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
++..+||||+||++|.|++|.+||.+........ .....+.+..++..++++|.+||..||.+|+|+.++++
T Consensus 215 y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~-- 292 (382)
T KOG0032|consen 215 YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ-- 292 (382)
T ss_pred CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc--
Confidence 5678999999999999999999998864322221 12233456788999999999999999999999999999
Q ss_pred hhhhhcCCccccCC
Q psy4039 507 QLYLWAPKHWLYGA 520 (588)
Q Consensus 507 ~~~~~~~h~w~~~~ 520 (588)
|||++..
T Consensus 293 -------HpWi~~~ 299 (382)
T KOG0032|consen 293 -------HPWIKSI 299 (382)
T ss_pred -------CccccCC
Confidence 9999853
No 33
>KOG0660|consensus
Probab=100.00 E-value=2.1e-43 Score=354.27 Aligned_cols=258 Identities=22% Similarity=0.301 Sum_probs=206.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|...+.||+|+||.|+.+.++ |..||||++.+ .|.... ..++-.+|+++|+++ +|+|
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~------------~F~~~~---~akRtlRElklLr~~----~HeN 82 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN------------PFENQI---DAKRTLRELKLLRHL----RHEN 82 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhh------------hhhchH---HHHHHHHHHHHHHHh----cCCC
Confidence 55666799999999999999997 89999999841 122221 334456799999998 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
||.+++++... .......+|+|+|+|+.+|.+.|+.+. .|+...+..+++|+++||
T Consensus 83 Ii~l~di~~p~-----------------------~~~~f~DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgL 138 (359)
T KOG0660|consen 83 IIGLLDIFRPP-----------------------SRDKFNDVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGL 138 (359)
T ss_pred cceEEeecccc-----------------------cccccceeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhc
Confidence 99999998752 112233599999999999999998873 599999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|+|+.+|+||||||+|+|++.+ ..+||+|||+||..... ......+..+.|.+|.|||++..... +
T Consensus 139 KyiHSAnViHRDLKPsNll~n~~-----c~lKI~DFGLAR~~~~~---~~~~~mTeYVaTRWYRAPElll~~~~-----Y 205 (359)
T KOG0660|consen 139 KYIHSANVIHRDLKPSNLLLNAD-----CDLKICDFGLARYLDKF---FEDGFMTEYVATRWYRAPELLLNSSE-----Y 205 (359)
T ss_pred chhhcccccccccchhheeeccC-----CCEEeccccceeecccc---CcccchhcceeeeeecCHHHHhcccc-----c
Confidence 99999999999999999999988 78999999999987653 22233346788999999999965432 5
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc--------------------------ccc--ccccC-----CCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT--------------------------DYE--VNALP-----QLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~--------------------------~~~--~~~~~-----~~~~~~~~~ 480 (588)
+.+.||||+|||+.||++|++-|.+..... .+. ....+ .+....++.
T Consensus 206 t~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~ 285 (359)
T KOG0660|consen 206 TKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPL 285 (359)
T ss_pred cchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHH
Confidence 567899999999999999999998731000 000 01111 122467899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+.+|+.+||+.||.+|+|++|+++ |||+.
T Consensus 286 AidLlekmL~fdP~kRita~eAL~---------hPYl~ 314 (359)
T KOG0660|consen 286 AIDLLEKMLVFDPKKRITAEEALA---------HPYLA 314 (359)
T ss_pred HHHHHHHHhccCccccCCHHHHhc---------Chhhh
Confidence 999999999999999999999999 99998
No 34
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.9e-43 Score=360.92 Aligned_cols=249 Identities=25% Similarity=0.352 Sum_probs=203.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++....... ....+.+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~E~~~l~~l----~hp~ 62 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR--------------LKQEQHVHNEKRVLKEV----SHPF 62 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh--------------hHHHHHHHHHHHHHHhC----CCCc
Confidence 47899999999999999999997 8899999985311100 00223466799999987 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+. ..+++||||+ +|+|.+++...+ .+++..+..++.|++.|
T Consensus 63 iv~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~ 113 (291)
T cd05612 63 IIRLFWTEHDQ----------------------------RFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCA 113 (291)
T ss_pred HhhhHhhhccC----------------------------CeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 99999887653 2499999999 689999998764 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|+|||++||+||||||+|||++.+ +.+||+|||+++...... ...+||+.|+|||++.+..
T Consensus 114 l~~lH~~~i~H~dlkp~NIli~~~-----~~~kl~Dfg~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~------ 174 (291)
T cd05612 114 LEYLHSKEIVYRDLKPENILLDKE-----GHIKLTDFGFAKKLRDRT--------WTLCGTPEYLAPEVIQSKG------ 174 (291)
T ss_pred HHHHHHCCeeecCCCHHHeEECCC-----CCEEEEecCcchhccCCc--------ccccCChhhcCHHHHcCCC------
Confidence 999999999999999999999877 789999999997654321 1356999999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AELAATV 505 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e~l~~ 505 (588)
++.++|||||||++|||++|+.||.+......+. ......++..+++.+++||++||+.||.+||+ ++++++
T Consensus 175 ~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~- 253 (291)
T cd05612 175 HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN- 253 (291)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc-
Confidence 4578999999999999999999997743222111 11223456678999999999999999999995 999888
Q ss_pred HhhhhhcCCccccC
Q psy4039 506 CQLYLWAPKHWLYG 519 (588)
Q Consensus 506 L~~~~~~~h~w~~~ 519 (588)
|||+..
T Consensus 254 --------h~~~~~ 259 (291)
T cd05612 254 --------HRWFKS 259 (291)
T ss_pred --------CccccC
Confidence 999963
No 35
>KOG0611|consensus
Probab=100.00 E-value=1.2e-43 Score=357.13 Aligned_cols=277 Identities=24% Similarity=0.329 Sum_probs=225.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|++.+.||+|+||.|-+|+.. |+.||||.|++..+.+.. ....+.+||+||..| +|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeq--------------DlvhIRREIeIMSsL----NHPh 114 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQ--------------DLVHIRREIEIMSSL----NHPH 114 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHH--------------HHHHHHHHHHHHhhc----CCCc
Confidence 57999999999999999999885 999999999765443321 223356799999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++|++|+..+ .+.+||||. +|.|.+|+.+++ .|++.++..+++||+.|
T Consensus 115 II~IyEVFENkd----------------------------KIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSA 165 (668)
T KOG0611|consen 115 IIQIYEVFENKD----------------------------KIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSA 165 (668)
T ss_pred eeehhhhhcCCc----------------------------eEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHH
Confidence 999999998743 499999999 799999999886 99999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|+|.++++|||||.+|||+|.+ +++||+|||++..+..+.-. .++||+|-|.+||++.+.++
T Consensus 166 VhYCHknrVvHRDLKLENILLD~N-----~NiKIADFGLSNly~~~kfL------qTFCGSPLYASPEIvNG~PY----- 229 (668)
T KOG0611|consen 166 VHYCHKNRVVHRDLKLENILLDQN-----NNIKIADFGLSNLYADKKFL------QTFCGSPLYASPEIVNGTPY----- 229 (668)
T ss_pred HHHHhhccceecccchhheeecCC-----CCeeeeccchhhhhccccHH------HHhcCCcccCCccccCCCCC-----
Confidence 999999999999999999999998 89999999999877664333 27899999999999999884
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLW 511 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~ 511 (588)
-++.+|-||+||+||.|+.|..||.+............... .+.-|.++.-||+.||..||++|-|++++..
T Consensus 230 ~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAs------- 302 (668)
T KOG0611|consen 230 KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPSDASGLIRWMLMVNPERRATIEDIAS------- 302 (668)
T ss_pred CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhh-------
Confidence 35679999999999999999999988432222221111111 1235677899999999999999999999999
Q ss_pred cCCcccc---------------CCCCChhHHHHHHHhhhccccccCcc
Q psy4039 512 APKHWLY---------------GATPSHNEIMQWLLTLTTKVLCTGVS 544 (588)
Q Consensus 512 ~~h~w~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~ 544 (588)
|.|+. ...|....+.+|....++-++.....
T Consensus 303 --HWWvNwgy~~~V~~~ea~h~~~~P~~~~m~dw~~Rs~~~~~~~~Ak 348 (668)
T KOG0611|consen 303 --HWWVNWGYNMPVIQEEAQHIDHTPGSDSMADWTERSETMIVQDLAK 348 (668)
T ss_pred --hheeecccccccccccccccCCCCcchhhhHHhhccccchhhhhhh
Confidence 88876 23455566777887766665555443
No 36
>KOG0193|consensus
Probab=100.00 E-value=2.3e-43 Score=372.02 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=213.7
Q ss_pred CCCccccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 187 LPDVDDVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 187 ~~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
....|++..+++.+++.||+|+||+||+|.|-| +||||++.-..... ...+.|.+|+.++++.
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~---------------~qlqaFKnEVa~lkkT- 445 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTP---------------EQLQAFKNEVAVLKKT- 445 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCH---------------HHHHHHHHHHHHHhhc-
Confidence 458899999999999999999999999999975 79999995322211 1345577789999887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i 345 (588)
+|.||+-+.|+|..+ .+.||+.+|+| +|..+|+....+|++.+.+.|
T Consensus 446 ---RH~NIlLFMG~~~~p-----------------------------~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idI 493 (678)
T KOG0193|consen 446 ---RHENILLFMGACMNP-----------------------------PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDI 493 (678)
T ss_pred ---chhhheeeehhhcCC-----------------------------ceeeeehhccCchhhhhccchhhhhhHHHHHHH
Confidence 999999999998763 26899999965 899999988779999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
++|+++|+.|||.++|||||||+.||+++++ +.|||+|||++..-..-. .........|...|||||++..+
T Consensus 494 AqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~-----~kVkIgDFGLatvk~~w~---g~~q~~qp~gsilwmAPEvIRmq 565 (678)
T KOG0193|consen 494 AQQIAQGMDYLHAKNIIHRDLKSNNIFLHED-----LKVKIGDFGLATVKTRWS---GEQQLEQPHGSLLWMAPEVIRMQ 565 (678)
T ss_pred HHHHHHhhhhhhhhhhhhhhccccceEEccC-----CcEEEecccceeeeeeec---cccccCCCccchhhhcHHHHhhc
Confidence 9999999999999999999999999999988 899999999997633210 01111234588999999999865
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccccc----C---CCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNAL----P---QLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~----~---~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
.. ..++..+|||||||++|||+||..||........+-.... + ....+++.++++|+..||..++++||.
T Consensus 566 d~---nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~ 642 (678)
T KOG0193|consen 566 DD---NPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPL 642 (678)
T ss_pred cc---CCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCcc
Confidence 42 1256789999999999999999999986543333221111 1 233578899999999999999999999
Q ss_pred HHHHHHHHhhhhh
Q psy4039 499 AELAATVCQLYLW 511 (588)
Q Consensus 499 ~~e~l~~L~~~~~ 511 (588)
+.+++..|+..+-
T Consensus 643 F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 643 FPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHHHhhh
Confidence 9999997776553
No 37
>KOG0694|consensus
Probab=100.00 E-value=3.4e-43 Score=376.23 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=211.6
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
..+.+++|.+.++||+|+||+|+++..+ ++.||||++++..+-.++. .+....|..|+...
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~--------------Ve~~~~EkrI~~la--- 425 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDE--------------VESLMCEKRIFELA--- 425 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecccc--------------HHHHHHHHHHHHHh---
Confidence 4788899999999999999999999998 6799999998766554431 12234577888766
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
.+||.+++|+.+|+... ++|.||||. +|++..+.+. ..+++..+..++.
T Consensus 426 ~~HPFL~~L~~~fQT~~----------------------------~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaA 475 (694)
T KOG0694|consen 426 NRHPFLVNLFSCFQTKE----------------------------HLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAA 475 (694)
T ss_pred ccCCeEeecccccccCC----------------------------eEEEEEEecCCCcEEEEEec--ccccHHHHHHHHH
Confidence 47999999999998743 599999999 4674333332 3899999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
.|+.||.|||++|||+||||.+|||+|.+ |.+||+|||+|+..... ...+.++||||.|||||++.++.
T Consensus 476 ev~l~L~fLH~~~IIYRDlKLdNiLLD~e-----Gh~kiADFGlcKe~m~~-----g~~TsTfCGTpey~aPEil~e~~- 544 (694)
T KOG0694|consen 476 EVVLGLQFLHENGIIYRDLKLDNLLLDTE-----GHVKIADFGLCKEGMGQ-----GDRTSTFCGTPEFLAPEVLTEQS- 544 (694)
T ss_pred HHHHHHHHHHhcCceeeecchhheEEccc-----CcEEecccccccccCCC-----CCccccccCChhhcChhhhccCc-
Confidence 99999999999999999999999999998 99999999999874321 22334899999999999999886
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----H
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----E 500 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~ 500 (588)
|+..+|+|||||+||||+.|..||.++.....+. ....+..|..+|.++.++++++|.+||++|..+ +
T Consensus 545 -----Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~ 619 (694)
T KOG0694|consen 545 -----YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAE 619 (694)
T ss_pred -----ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCch
Confidence 5577999999999999999999999865554443 234455778899999999999999999999865 5
Q ss_pred HHHHHHhhhhhcCCcccc
Q psy4039 501 LAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 501 e~l~~L~~~~~~~h~w~~ 518 (588)
++.. ||||+
T Consensus 620 ~i~~---------hpFFr 628 (694)
T KOG0694|consen 620 DIKK---------HPFFR 628 (694)
T ss_pred hhhh---------CCccc
Confidence 6666 88886
No 38
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.2e-42 Score=353.89 Aligned_cols=257 Identities=25% Similarity=0.311 Sum_probs=197.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
++|++.+.||+|+||.||+|.+. +..||||.+........ ......+|+.+++.+.. ..||
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~~-~~hp 64 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---------------MPLSTIREVAVLRHLET-FEHP 64 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC---------------chHHHHHHHHHHHhhcc-cCCC
Confidence 46899999999999999999874 67899999854221111 11233457777766522 2799
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
||++++++|.... ......+++||||++++|.+++... ...+++..+..++.|++.
T Consensus 65 niv~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~ 121 (290)
T cd07862 65 NVVRLFDVCTVSR-----------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 121 (290)
T ss_pred CcceEEEEEeccc-----------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 9999999986421 1123358999999999999999764 235899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+||||||+|||++.+ +.+||+|||+++...... ......||+.|+|||++.+..
T Consensus 122 aL~~lH~~~iiH~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~----- 185 (290)
T cd07862 122 GLDFLHSHRVVHRDLKPQNILVTSS-----GQIKLADFGLARIYSFQM------ALTSVVVTLWYRAPEVLLQSS----- 185 (290)
T ss_pred HHHHHHHCCeeeCCCCHHHEEEcCC-----CCEEEccccceEeccCCc------ccccccccccccChHHHhCCC-----
Confidence 9999999999999999999999987 789999999997654321 112456899999999997654
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc----------ccc-------------------cCCCCCCccHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----------VNA-------------------LPQLNTNVPEVMR 482 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----------~~~-------------------~~~~~~~~~~~l~ 482 (588)
++.++|||||||++|||++|.+||.+........ ... ...+...+++.++
T Consensus 186 -~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (290)
T cd07862 186 -YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK 264 (290)
T ss_pred -CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHH
Confidence 4578999999999999999999997632110000 000 0011235778899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+++.+||+.||++|||+.++++ |||+
T Consensus 265 ~li~~~l~~~P~~R~s~~~~l~---------hp~f 290 (290)
T cd07862 265 DLLLKCLTFNPAKRISAYSALS---------HPYF 290 (290)
T ss_pred HHHHHHhccCchhcCCHHHHhc---------CCCC
Confidence 9999999999999999999999 9996
No 39
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.8e-42 Score=357.72 Aligned_cols=256 Identities=22% Similarity=0.297 Sum_probs=201.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++...... .......+|+.+++.+ +|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h~n 64 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE----------------GTPFTAIREASLLKGL----KHAN 64 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc----------------ccchhHHHHHHHHhhC----CCCC
Confidence 78999999999999999999996 789999998532111 0122345689999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+.. ..++||||++++|.+++......+++..+..++.|++.||
T Consensus 65 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 65 IVLLHDIIHTKE----------------------------TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred cCeEEEEEecCC----------------------------eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 999999987632 4899999999999999987655799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+... +
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~-----~ 181 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT-----GELKLADFGLARAKSVPSH-----TYSNEVVTLWYRPPDVLLGSTE-----Y 181 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC-----CCEEECCCCcceeccCCCc-----cCCCCcccCCCCChHHHcCCCC-----C
Confidence 99999999999999999999987 7899999999975432111 1113568999999999865431 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc-c----------ccccc------CC---------C---------CCCcc
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-Y----------EVNAL------PQ---------L---------NTNVP 478 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-~----------~~~~~------~~---------~---------~~~~~ 478 (588)
+.++||||+||++|||++|..||.+...... . ....+ +. . ....+
T Consensus 182 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (303)
T cd07869 182 STCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYV 261 (303)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCC
Confidence 4679999999999999999999975211000 0 00000 00 0 01245
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCCC
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPS 523 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~~ 523 (588)
+++++|+.+||+.||.+|||++++++ |||++...+.
T Consensus 262 ~~~~dli~~mL~~dp~~R~s~~~~l~---------h~~f~~~~~~ 297 (303)
T cd07869 262 NHAEDLASKLLQCFPKNRLSAQAALS---------HEYFSDLPPR 297 (303)
T ss_pred hHHHHHHHHHhccCchhccCHHHHhc---------CcccccCChh
Confidence 77899999999999999999999999 9999866553
No 40
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-42 Score=365.49 Aligned_cols=257 Identities=22% Similarity=0.302 Sum_probs=208.2
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNS 264 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~ 264 (588)
.....+..++|++.+.||+|+||.||+|.+. +..||||++...... .......+.+|+.+++.
T Consensus 22 ~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~~~~E~~~l~~ 87 (340)
T PTZ00426 22 KRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--------------KQKQVDHVFSERKILNY 87 (340)
T ss_pred ccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--------------hhhhHHHHHHHHHHHHh
Confidence 3446677899999999999999999999875 358999998531110 00122345678999988
Q ss_pred hcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHH
Q psy4039 265 VENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERV 343 (588)
Q Consensus 265 l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~ 343 (588)
+ +|||||++++++.+.. .+|+||||+ +|+|.+++.... .+++..+.
T Consensus 88 l----~hp~Iv~~~~~~~~~~----------------------------~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~ 134 (340)
T PTZ00426 88 I----NHPFCVNLYGSFKDES----------------------------YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGC 134 (340)
T ss_pred C----CCCCCcceEEEEEeCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHH
Confidence 7 8999999999987632 499999999 689999998764 79999999
Q ss_pred HHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHh
Q psy4039 344 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 423 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 423 (588)
.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+++...... ....||+.|||||++.
T Consensus 135 ~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~-----~~ikL~DFG~a~~~~~~~--------~~~~gt~~y~aPE~~~ 201 (340)
T PTZ00426 135 FYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKD-----GFIKMTDFGFAKVVDTRT--------YTLCGTPEYIAPEILL 201 (340)
T ss_pred HHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC-----CCEEEecCCCCeecCCCc--------ceecCChhhcCHHHHh
Confidence 999999999999999999999999999999877 899999999997654311 2457999999999997
Q ss_pred cCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC----
Q psy4039 424 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP---- 497 (588)
Q Consensus 424 ~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp---- 497 (588)
+.. ++.++|||||||++|||++|..||.+......+. ......++..++++++++|++||+.||++|+
T Consensus 202 ~~~------~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~ 275 (340)
T PTZ00426 202 NVG------HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLK 275 (340)
T ss_pred CCC------CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCC
Confidence 654 4578999999999999999999998743221111 1122345677899999999999999999995
Q ss_pred -CHHHHHHHHhhhhhcCCccccC
Q psy4039 498 -SAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 498 -s~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+++++++ |||+..
T Consensus 276 ~~~~~~~~---------hp~f~~ 289 (340)
T PTZ00426 276 KGAQNVKE---------HPWFGN 289 (340)
T ss_pred CCHHHHHc---------CCCcCC
Confidence 8999988 999974
No 41
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-42 Score=362.77 Aligned_cols=260 Identities=23% Similarity=0.293 Sum_probs=202.6
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|.+..++|++.+.||+|+||.||+|.+. +..||||++...... .....+.+|+.++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~E~~~l~ 65 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA----------------SEHKALMSELKILI 65 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch----------------HHHHHHHHHHHHHH
Confidence 5667789999999999999999999753 468999998532110 01234567899998
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
.+ .+|||||+++++|.+.. ..++++|||+ +|+|.+++....
T Consensus 66 ~l---~~h~niv~~~~~~~~~~---------------------------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 115 (338)
T cd05102 66 HI---GNHLNVVNLLGACTKPN---------------------------GPLMVIVEFCKYGNLSNFLRAKREFFSPYRE 115 (338)
T ss_pred Hh---ccCcceeeEEeEecCCC---------------------------CceEEEEecCCCCcHHHHHHhcchhcccccc
Confidence 87 58999999999876521 1389999999 689999997531
Q ss_pred -----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy4039 335 -----------------------------------------------------AQLSMHERVLLFTQLLEGVTHLNMHRT 361 (588)
Q Consensus 335 -----------------------------------------------------~~l~~~~~~~i~~ql~~gL~yLH~~~I 361 (588)
..+++..+..++.||++||.|||++||
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 195 (338)
T cd05102 116 KSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKC 195 (338)
T ss_pred cchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 247888999999999999999999999
Q ss_pred eeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhh
Q psy4039 362 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWT 441 (588)
Q Consensus 362 vHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS 441 (588)
+||||||+|||++.+ +.+||+|||+++......... ......+|+.|||||++.+.. ++.++||||
T Consensus 196 vHrDiKp~Nil~~~~-----~~~kl~DfG~a~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~sDiws 261 (338)
T cd05102 196 IHRDLAARNILLSEN-----NVVKICDFGLARDIYKDPDYV---RKGSARLPLKWMAPESIFDKV------YTTQSDVWS 261 (338)
T ss_pred ECCCCccceEEEcCC-----CcEEEeecccccccccCcchh---cccCCCCCccccCcHHhhcCC------CCcccCHHH
Confidence 999999999999987 789999999998653321111 111345678999999997654 457899999
Q ss_pred HHHHHHHHhc-CCCCCcccccccc----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 442 AGTVAYEIFG-HDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 442 ~Gvil~Ellt-G~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
|||++|||++ |..||.+...... ......+..+..+++++.+++.+||+.||++|||+.++++.|+..+
T Consensus 262 lG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 262 FGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999997 9999976322111 1112233456678999999999999999999999999999887543
No 42
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.3e-42 Score=359.51 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=199.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|++. +..||||++...... ......+.+|+.+++.+ +||||
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~hpni 61 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH---------------VSDATRILREIKLLRLL----RHPDI 61 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc---------------chhHHHHHHHHHHHHhC----CCCCE
Confidence 4889999999999999999986 789999998421100 00122456799999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.... ......+|+||||++++|.+++.... .+++..+..++.||++||.
T Consensus 62 v~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~ 117 (338)
T cd07859 62 VEIKHIMLPPS-----------------------RREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALK 117 (338)
T ss_pred eeecceEeccC-----------------------CCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHH
Confidence 99999886532 11122489999999999999997654 7999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+|||++.+ +.+||+|||+++........ ........||+.|+|||++.+.... ++
T Consensus 118 ~LH~~~ivH~dlkp~NIll~~~-----~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~----~~ 186 (338)
T cd07859 118 YIHTANVFHRDLKPKNILANAD-----CKLKICDFGLARVAFNDTPT--AIFWTDYVATRWYRAPELCGSFFSK----YT 186 (338)
T ss_pred HHHHCCeecCCCCHHHeEECCC-----CcEEEccCccccccccccCc--cccccCCCCCCCcCCHHHHhccccc----cC
Confidence 9999999999999999999987 89999999999864332111 0111245799999999998653221 45
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccc------------------------------ccccc---cCCCCCCccHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------------YEVNA---LPQLNTNVPEVM 481 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------------~~~~~---~~~~~~~~~~~l 481 (588)
.++|||||||++|||++|++||.+...... ..... .......+++++
T Consensus 187 ~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (338)
T cd07859 187 PAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLA 266 (338)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHH
Confidence 789999999999999999999965321000 00000 001113467889
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.+++.+||+.||++|||++++++ |||++.
T Consensus 267 ~~li~~~l~~~P~~Rpt~~e~l~---------hp~f~~ 295 (338)
T cd07859 267 LRLLERLLAFDPKDRPTAEEALA---------DPYFKG 295 (338)
T ss_pred HHHHHHHcCcCcccCCCHHHHhc---------Cchhhh
Confidence 99999999999999999999999 999974
No 43
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.3e-42 Score=350.61 Aligned_cols=251 Identities=19% Similarity=0.265 Sum_probs=196.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|+++ ++.||||++...... ....+.+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~h~~ 61 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN---------------EEVKETTLRELKMLRTL----KQEN 61 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc---------------ccchhhHHHHHHHHHhC----CCcc
Confidence 47999999999999999999997 789999998532111 11233456789999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+.. .+++||||+.+++.+.+......+++..+..++.|++.||
T Consensus 62 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 62 IVELKEAFRRRG----------------------------KLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred ccchhhhEecCC----------------------------EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 999999887632 4899999997665566655445799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+|+||||||+||+++.+ +.+||+|||+++......... .....||+.|+|||++.+.. +
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~------~ 178 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN-----DVLKLCDFGFARNLSEGSNAN----YTEYVATRWYRSPELLLGAP------Y 178 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC-----CcEEEeeccCccccccccccc----ccccccccccCCcHHHcCCC------C
Confidence 99999999999999999999887 789999999998764422111 12456899999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccccccC----------CCCCCccH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEVNALP----------QLNTNVPE 479 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~~~~~----------~~~~~~~~ 479 (588)
+.++|||||||++|||++|++||.+...... ......+ .....+|.
T Consensus 179 ~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 258 (287)
T cd07848 179 GKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSG 258 (287)
T ss_pred CCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCH
Confidence 5789999999999999999999975311000 0000000 01123678
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++.+||++||+.||++|||++++++ |||+
T Consensus 259 ~~~dll~~~L~~~P~~R~s~~~~l~---------hp~f 287 (287)
T cd07848 259 VLLDLMKNLLKLNPTDRYLTEQCLN---------HPAF 287 (287)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc---------CCCC
Confidence 8999999999999999999999999 9996
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.8e-42 Score=351.65 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=200.9
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|+..+.||+|+||.||+|.+. ++.||||.+....... ......+.+|+.++..+ +|+||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------~~~~~~~~~E~~il~~l----~~~~i 62 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--------------RKGEAMALNEKRILEKV----NSRFV 62 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh--------------hhhHHHHHHHHHHHHhc----CCCcE
Confidence 3788899999999999999986 8899999985321110 00123456799999987 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. .+++||||+ +|+|..++... ...+++..+..++.|++.|
T Consensus 63 v~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 63 VSLAYAYETKD----------------------------ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred EEEEEEEccCC----------------------------eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 99999887632 489999999 68999888754 2368999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++++ +.+||+|||++.....+... ....||+.|||||++.+..
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~------ 177 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR-----GHIRISDLGLAVQIPEGETV------RGRVGTVGYMAPEVINNEK------ 177 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC-----CCEEEeeCCCcEEcCCCCee------cCCCCCCCccCHhhhcCCC------
Confidence 999999999999999999999987 78999999999775432211 1356999999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AEL 501 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e 501 (588)
++.++|||||||++|||++|+.||......... .......++..+++++.+|+.+||+.||.+||+ +++
T Consensus 178 ~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~ 257 (285)
T cd05631 178 YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAG 257 (285)
T ss_pred CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHH
Confidence 457899999999999999999999764321111 111223455678999999999999999999997 889
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||+..
T Consensus 258 ~~~---------h~~~~~ 266 (285)
T cd05631 258 VKQ---------HPIFKN 266 (285)
T ss_pred Hhc---------CHhhcC
Confidence 888 999965
No 45
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.2e-42 Score=360.94 Aligned_cols=246 Identities=23% Similarity=0.311 Sum_probs=197.2
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||||++....... ......+.+|+.+++.+ +||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~l----~hp~i~~~~~ 62 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA--------------KDEVAHTLTESRVLQNT----RHPFLTALKY 62 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--------------hHHHHHHHHHHHHHHhC----CCCCCCCEEE
Confidence 46999999999999986 7899999985311100 00122345688899887 9999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+++||||+ +|+|.+++.... .+++.++..++.||+.||+|||+
T Consensus 63 ~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH~ 113 (323)
T cd05571 63 SFQTHD----------------------------RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALGYLHS 113 (323)
T ss_pred EEEcCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 887632 499999999 689999997654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++...... ......+||+.|+|||++.+.. ++.++|
T Consensus 114 ~~ivHrDlkp~NIll~~~-----~~~kl~DfG~a~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~------~~~~~D 177 (323)
T cd05571 114 CDVVYRDLKLENLMLDKD-----GHIKITDFGLCKEGISDG-----ATMKTFCGTPEYLAPEVLEDND------YGRAVD 177 (323)
T ss_pred CCeEeCCCCHHHEEECCC-----CCEEEeeCCCCcccccCC-----CcccceecCccccChhhhcCCC------CCcccc
Confidence 999999999999999987 789999999987532211 1112467999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLYLW 511 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~~~ 511 (588)
|||+||++|||++|..||.......... ......++..+++++.++|.+||+.||++|| ++.++++
T Consensus 178 iwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~------- 250 (323)
T cd05571 178 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME------- 250 (323)
T ss_pred CcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc-------
Confidence 9999999999999999997643222111 1223356678899999999999999999999 8999988
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|||+..
T Consensus 251 --h~~f~~ 256 (323)
T cd05571 251 --HRFFAS 256 (323)
T ss_pred --CCCcCC
Confidence 999974
No 46
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.3e-42 Score=373.05 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=199.1
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|++++.||+|+||+||+|.+. ++.||||++... .....+|+.+|+.+ +||
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~---------------------~~~~~~Ei~il~~l----~h~ 119 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD---------------------PQYKNRELLIMKNL----NHI 119 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC---------------------cchHHHHHHHHHhc----CCC
Confidence 368999999999999999999986 789999998421 11234689999987 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHH---hcCCCCHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRE---RCAQLSMHERVLLFTQL 349 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~---~~~~l~~~~~~~i~~ql 349 (588)
|||+++++|..... ........+++||||++++|.+++.. ....+++..++.++.||
T Consensus 120 niv~l~~~~~~~~~--------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi 179 (440)
T PTZ00036 120 NIIFLKDYYYTECF--------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQL 179 (440)
T ss_pred CCcceeeeEeeccc--------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 99999998765320 01122335889999999899888764 23479999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+++|+||||||+|||++.+. ..+||+|||+|+....+.. .....||+.|+|||++.+...
T Consensus 180 ~~gL~yLH~~~IiHrDLKp~NILl~~~~----~~vkL~DFGla~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~-- 247 (440)
T PTZ00036 180 CRALAYIHSKFICHRDLKPQNLLIDPNT----HTLKLCDFGSAKNLLAGQR------SVSYICSRFYRAPELMLGATN-- 247 (440)
T ss_pred HHHHHHHHHCCEecCCcCHHHEEEcCCC----CceeeeccccchhccCCCC------cccCCCCcCccCHHHhcCCCC--
Confidence 9999999999999999999999998652 4799999999987543221 113568999999999865431
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc----------------------ccccc---------cCCCCCCcc
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----------------------YEVNA---------LPQLNTNVP 478 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----------------------~~~~~---------~~~~~~~~~ 478 (588)
++.++|||||||++|||++|.+||.+...... +.... ...++...|
T Consensus 248 ---~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~ 324 (440)
T PTZ00036 248 ---YTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTP 324 (440)
T ss_pred ---CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCC
Confidence 45789999999999999999999976421100 00000 011334578
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+++++||.+||+.||.+|||+.++++ |||+.
T Consensus 325 ~~~~~li~~~L~~dP~~R~ta~e~l~---------hp~f~ 355 (440)
T PTZ00036 325 DDAINFISQFLKYEPLKRLNPIEALA---------DPFFD 355 (440)
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhC---------ChhHH
Confidence 89999999999999999999999999 99987
No 47
>KOG0658|consensus
Probab=100.00 E-value=1.7e-42 Score=348.30 Aligned_cols=251 Identities=26% Similarity=0.369 Sum_probs=204.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
-.|...++||.|+||+||+|... +.+||||++.. .++.-.+|..||+.+ .|||
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~---------------------d~r~knrEl~im~~l----~HpN 78 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQ---------------------DKRYKNRELQIMRKL----DHPN 78 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecC---------------------CCCcCcHHHHHHHhc----CCcC
Confidence 35778899999999999999997 68999999853 333446799999976 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER---CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~---~~~l~~~~~~~i~~ql~ 350 (588)
||+|..+|..... ....++.+||||+..+|.++++.- +..++.-.+..++.||+
T Consensus 79 IV~L~~~f~~~~~-----------------------~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlf 135 (364)
T KOG0658|consen 79 IVRLLYFFSSSTE-----------------------SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLF 135 (364)
T ss_pred eeeEEEEEEecCC-----------------------CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHH
Confidence 9999999887431 123358899999999999999852 45899999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||+.||+||||||.|||+|.+. +.+||||||.|+....+... ....-|..|.|||++.+...
T Consensus 136 rgl~yLh~~~IcHRDIKPqNlLvD~~t----g~LKicDFGSAK~L~~~epn------iSYicSRyYRaPELifga~~--- 202 (364)
T KOG0658|consen 136 RGLAYLHSHGICHRDIKPQNLLVDPDT----GVLKICDFGSAKVLVKGEPN------ISYICSRYYRAPELIFGATE--- 202 (364)
T ss_pred HHHHHHHhcCcccCCCChheEEEcCCC----CeEEeccCCcceeeccCCCc------eeEEEeccccCHHHHcCccc---
Confidence 999999999999999999999999874 89999999999987664321 13445779999999988763
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccc----------------------cccccc--------cccCC-CCCCccH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR----------------------NTDYEV--------NALPQ-LNTNVPE 479 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~----------------------~~~~~~--------~~~~~-~~~~~~~ 479 (588)
|+.+.||||.||++.||+-|++-|.++.. +..+.. ..+.. +....++
T Consensus 203 --Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~ 280 (364)
T KOG0658|consen 203 --YTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPP 280 (364)
T ss_pred --cCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCH
Confidence 66789999999999999999999987311 111111 11111 3456789
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++.+|+.++|..+|.+|.++.|++. ||++.
T Consensus 281 d~~dll~~~L~Y~P~~R~~~~~~l~---------h~fFd 310 (364)
T KOG0658|consen 281 DALDLLSKLLQYSPSKRLSALEALA---------HPFFD 310 (364)
T ss_pred HHHHHHHHHhccChhhcCCHHHHhc---------chhhH
Confidence 9999999999999999999999999 99986
No 48
>KOG1187|consensus
Probab=100.00 E-value=5e-42 Score=361.67 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=196.2
Q ss_pred CCeEEeeeecccCceeEEEEEECC-eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFRG-VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~g-~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
++|...+.||+|+||.||+|...+ ..||||++...... . .++|.+|+.++.++ +|||+
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~----------------~-~~eF~~Ei~~ls~l----~H~Nl 133 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ----------------G-EREFLNEVEILSRL----RHPNL 133 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc----------------c-hhHHHHHHHHHhcC----CCcCc
Confidence 888888999999999999999985 89999987432110 0 34588899999998 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCA-QLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~-~l~~~~~~~i~~ql~~g 352 (588)
|+|+|||.+.. . ..++|+||+ +|+|.++|..... .++|.++.+|+.++|+|
T Consensus 134 v~LlGyC~e~~-----------------------~----~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~g 186 (361)
T KOG1187|consen 134 VKLLGYCLEGG-----------------------E----HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARG 186 (361)
T ss_pred ccEEEEEecCC-----------------------c----eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999998732 0 389999999 7999999998755 89999999999999999
Q ss_pred HHHHHhC---CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC-CCccccccccccc-cCCccccchhHHhcCCC
Q psy4039 353 VTHLNMH---RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS-GLSMQYSSADIEL-GGNVALMAPEVALATPG 427 (588)
Q Consensus 353 L~yLH~~---~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~-~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~ 427 (588)
|+|||+. .||||||||+|||+|++ +++||+|||+|+.... ..... +. .||.+|+|||++..+.
T Consensus 187 L~yLH~~~~~~iiHrDiKssNILLD~~-----~~aKlsDFGLa~~~~~~~~~~~------~~~~gt~gY~~PEy~~~g~- 254 (361)
T KOG1187|consen 187 LAYLHEGCPPPIIHRDIKSSNILLDED-----FNAKLSDFGLAKLGPEGDTSVS------TTVMGTFGYLAPEYASTGK- 254 (361)
T ss_pred HHHHccCCCCCEecCCCCHHHeeECCC-----CCEEccCccCcccCCcccccee------eecCCCCccCChhhhccCC-
Confidence 9999984 49999999999999988 8999999999976543 21111 12 7999999999997533
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccc---------------ccccccccccCCCC-CCcc--HH---HHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA---------------RNTDYEVNALPQLN-TNVP--EV---MRRLVA 486 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~---------------~~~~~~~~~~~~~~-~~~~--~~---l~~Li~ 486 (588)
.++|+|||||||+++|++||+.|..... ..........+.+. ...+ .+ +..+..
T Consensus 255 -----lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~ 329 (361)
T KOG1187|consen 255 -----LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELAL 329 (361)
T ss_pred -----cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHH
Confidence 5689999999999999999998876421 01112222233332 2333 22 556777
Q ss_pred HhhhhCCCCCCCHHHHHHHHh
Q psy4039 487 KLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 487 ~~L~~dP~~Rps~~e~l~~L~ 507 (588)
+|++.+|.+||+|.+++..|+
T Consensus 330 ~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 330 RCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HHcCcCCCcCcCHHHHHHHHH
Confidence 899999999999999988774
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-41 Score=355.12 Aligned_cols=265 Identities=21% Similarity=0.268 Sum_probs=208.3
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+..++|++.+.||+|+||.||++.+. +..||+|.+.... . ......+.+|+.+++.+ +
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~-------------~~~~~~~~~E~~~l~~l----~ 61 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---K-------------PAIRNQIIRELQVLHEC----N 61 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---C-------------HHHHHHHHHHHHHHHHC----C
Confidence 44589999999999999999999997 7889999985311 0 01223466799999987 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||||+++++++.+.. .+++||||+ +|+|.+++.... .+++..+..++.|+
T Consensus 62 h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i 112 (331)
T cd06649 62 SPYIVGFYGAFYSDG----------------------------EISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAV 112 (331)
T ss_pred CCCCCeEEEEEEECC----------------------------EEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 999999999987632 489999999 579999998754 79999999999999
Q ss_pred HHHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++...... .....||+.|+|||++.+..
T Consensus 113 ~~~l~~lH~~~~ivH~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~-- 178 (331)
T cd06649 113 LRGLAYLREKHQIMHRDVKPSNILVNSR-----GEIKLCDFGVSGQLIDSM-------ANSFVGTRSYMSPERLQGTH-- 178 (331)
T ss_pred HHHHHHHhhcCCEEcCCCChhhEEEcCC-----CcEEEccCcccccccccc-------cccCCCCcCcCCHhHhcCCC--
Confidence 9999999986 69999999999999987 789999999987653321 11356999999999997654
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc---------------c----------------------------
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---------------Y---------------------------- 465 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---------------~---------------------------- 465 (588)
++.++|||||||++|||++|+.||........ .
T Consensus 179 ----~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T cd06649 179 ----YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIF 254 (331)
T ss_pred ----CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHH
Confidence 45789999999999999999999964210000 0
Q ss_pred ------cccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCCChhHHHHHHHh
Q psy4039 466 ------EVNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLT 533 (588)
Q Consensus 466 ------~~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~ 533 (588)
.....+.. ...+++++++||.+||+.||++|||++++++ |||++.......+...++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~---------h~~~~~~~~~~~~~~~~~~~ 320 (331)
T cd06649 255 ELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN---------HTFIKRSEVEEVDFAGWLCK 320 (331)
T ss_pred HHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc---------ChHHhhcccccccHHHHHHH
Confidence 00001111 1246789999999999999999999999999 99998655555555555543
No 50
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-41 Score=354.86 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=200.7
Q ss_pred CeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+|++.+.||+|+||.||++... +..||+|++.+...... ....+.+.+|+.++..+ ..|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~-------------~~~~~~~~~e~~~l~~l---~~~ 64 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQK-------------AKTVEHTRTERNVLEHV---RQS 64 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhh-------------hhHHHHHHHHHHHHHhc---cCC
Confidence 5889999999999999998863 78999999853111000 01123455688888876 469
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||+++++++.+.. .+++||||+ +|+|.+++..+. .+++.++..++.||+
T Consensus 65 ~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~ 115 (332)
T cd05614 65 PFLVTLHYAFQTEA----------------------------KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEII 115 (332)
T ss_pred CCcccEEEEEecCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 99999998887532 489999999 679999997654 799999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++||+||||||+|||++.+ +.+||+|||+++........ .....+||+.|||||++.+...
T Consensus 116 ~~l~~lH~~~ivHrDlkp~Nili~~~-----~~~kl~DfG~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~--- 183 (332)
T cd05614 116 LALEHLHKLGIVYRDIKLENILLDSE-----GHVVLTDFGLSKEFLSEEKE----RTYSFCGTIEYMAPEIIRGKGG--- 183 (332)
T ss_pred HHHHHHHHCCcEecCCCHHHeEECCC-----CCEEEeeCcCCccccccCCC----ccccccCCccccCHHHhcCCCC---
Confidence 99999999999999999999999987 79999999999764332111 1124679999999999975431
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccccc---c---cccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---Y---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SA 499 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~ 499 (588)
++.++|||||||++|||++|..||........ + .....+.++..+++.+++++.+||+.||++|| ++
T Consensus 184 --~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~ 261 (332)
T cd05614 184 --HGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGA 261 (332)
T ss_pred --CCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCH
Confidence 34679999999999999999999964321111 0 11233456677899999999999999999999 78
Q ss_pred HHHHHHHhhhhhcCCccccC
Q psy4039 500 ELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~ 519 (588)
+++++ |||++.
T Consensus 262 ~~~l~---------h~~~~~ 272 (332)
T cd05614 262 SEIKE---------HPFFKG 272 (332)
T ss_pred HHHHc---------CCCcCC
Confidence 89888 999975
No 51
>KOG0201|consensus
Probab=100.00 E-value=6.1e-43 Score=357.34 Aligned_cols=253 Identities=22% Similarity=0.279 Sum_probs=211.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|...+.||+|+||.||+|.+. ++.||+|++....... ..+++..|+.++..+ +++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d----------------eIediqqei~~Ls~~----~~~~ 72 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED----------------EIEDIQQEISVLSQC----DSPN 72 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch----------------hhHHHHHHHHHHHhc----Ccch
Confidence 45667799999999999999998 7899999995422211 234566799999998 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|.++|+.|.... .++++|||| +|++.+.|.... .+++..+..|+++++.|
T Consensus 73 it~yygsyl~g~----------------------------~LwiiMey~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~ 123 (467)
T KOG0201|consen 73 ITEYYGSYLKGT----------------------------KLWIIMEYCGGGSVLDLLKSGN-ILDEFEIAVILREVLKG 123 (467)
T ss_pred HHhhhhheeecc----------------------------cHHHHHHHhcCcchhhhhccCC-CCccceeeeehHHHHHH
Confidence 999999887632 499999999 689999998763 55999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++.+|||||+.|||+..+ +.+||+|||.+-........ ..+++|||.|||||++.+..
T Consensus 124 l~ylH~~~kiHrDIKaanil~s~~-----g~vkl~DfgVa~ql~~~~~r-----r~tfvGTPfwMAPEVI~~~~------ 187 (467)
T KOG0201|consen 124 LDYLHSEKKIHRDIKAANILLSES-----GDVKLADFGVAGQLTNTVKR-----RKTFVGTPFWMAPEVIKQSG------ 187 (467)
T ss_pred hhhhhhcceecccccccceeEecc-----CcEEEEecceeeeeechhhc-----cccccccccccchhhhcccc------
Confidence 999999999999999999999988 89999999999776553322 13789999999999998655
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
|+.|+||||||++++||++|.+|+....... .+.....|.+...+++.++++|..||+.||+.||+|.+++.
T Consensus 188 Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK----- 262 (467)
T KOG0201|consen 188 YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK----- 262 (467)
T ss_pred ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh-----
Confidence 6689999999999999999999997743322 23344556677789999999999999999999999999999
Q ss_pred hhcCCccccCCCC
Q psy4039 510 LWAPKHWLYGATP 522 (588)
Q Consensus 510 ~~~~h~w~~~~~~ 522 (588)
|.|++...+
T Consensus 263 ----h~FIk~a~k 271 (467)
T KOG0201|consen 263 ----HKFIKRAKK 271 (467)
T ss_pred ----hHHHHhcCC
Confidence 999997443
No 52
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-41 Score=353.49 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=195.0
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|+||.||+|.+. ++.||||++....... ......+.+|+.+++.+ +||||++++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~--------------~~~~~~~~~E~~~l~~l----~h~~iv~~~~~~ 62 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS--------------RSEVTHTLAERTVLAQV----NCPFIVPLKFSF 62 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhHHHHHHHHHHHHHhC----CCCcEeceeeEE
Confidence 799999999999987 7789999985311100 00123455688899887 999999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+.. .+|+||||+ +|+|.+++.... .+++..+..++.|++.||.|||++|
T Consensus 63 ~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 63 QSPE----------------------------KLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred ecCC----------------------------eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7632 489999999 689999997654 7999999999999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchh
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAW 440 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVw 440 (588)
|+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++|||
T Consensus 114 i~HrDlkp~Nili~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~Dvw 177 (312)
T cd05585 114 VIYRDLKPENILLDYQ-----GHIALCDFGLCKLNMKDDD-----KTNTFCGTPEYLAPELLLGHG------YTKAVDWW 177 (312)
T ss_pred eEeCCCCHHHeEECCC-----CcEEEEECcccccCccCCC-----ccccccCCcccCCHHHHcCCC------CCCcccee
Confidence 9999999999999987 7899999999975432111 112467999999999997654 45789999
Q ss_pred hHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCc
Q psy4039 441 TAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKH 515 (588)
Q Consensus 441 S~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~ 515 (588)
||||++|||++|+.||.+......+. ......++..+++++++++.+||+.||.+||+ +.++++ ||
T Consensus 178 slGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~---------hp 248 (312)
T cd05585 178 TLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN---------HP 248 (312)
T ss_pred chhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc---------CC
Confidence 99999999999999997643222111 12233456788999999999999999999985 667666 99
Q ss_pred cccCC
Q psy4039 516 WLYGA 520 (588)
Q Consensus 516 w~~~~ 520 (588)
|+...
T Consensus 249 ~~~~~ 253 (312)
T cd05585 249 FFSQL 253 (312)
T ss_pred CcCCC
Confidence 99754
No 53
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=346.25 Aligned_cols=258 Identities=18% Similarity=0.198 Sum_probs=203.1
Q ss_pred ccccCCeEEe--eeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIG--KFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~--~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.++.++++.. ..||+|++|.||+|.+.|+.||||.+...... ... ..+.+.+|+.+|.++
T Consensus 14 ~i~~~~i~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~--~~~------------~~~~~~~E~~~l~~l---- 75 (283)
T PHA02988 14 CIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG--HKV------------LIDITENEIKNLRRI---- 75 (283)
T ss_pred ecCHHHcCCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccc--cHH------------HHHHHHHHHHHHHhc----
Confidence 3444555555 67999999999999999999999998542211 100 123456799999988
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+|||||++++++.+.. .....+++||||+ +|+|.+++.... .+++.....++.|
T Consensus 76 ~h~nIv~~~g~~~~~~------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~i~~~ 130 (283)
T PHA02988 76 DSNNILKIYGFIIDIV------------------------DDLPRLSLILEYCTRGYLREVLDKEK-DLSFKTKLDMAID 130 (283)
T ss_pred CCCCEEEEeeeEEecc------------------------cCCCceEEEEEeCCCCcHHHHHhhCC-CCChhHHHHHHHH
Confidence 9999999999987621 1122489999999 589999998754 7999999999999
Q ss_pred HHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 349 LLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 349 l~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
++.||.|||+ .+++||||||+|||++.+ +.+||+|||+++...... ....||+.|+|||++.+...
T Consensus 131 i~~~l~~lH~~~~~~Hrdlkp~nill~~~-----~~~kl~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~ 197 (283)
T PHA02988 131 CCKGLYNLYKYTNKPYKNLTSVSFLVTEN-----YKLKIICHGLEKILSSPP--------FKNVNFMVYFSYKMLNDIFS 197 (283)
T ss_pred HHHHHHHHHhcCCCCCCcCChhhEEECCC-----CcEEEcccchHhhhcccc--------ccccCcccccCHHHhhhccc
Confidence 9999999998 499999999999999988 899999999997653321 13458899999999975321
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
. ++.++|||||||++|||++|+.||.+......+ .....+.++..+|+++++++.+||+.||++|||+++++
T Consensus 198 ~----~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell 273 (283)
T PHA02988 198 E----YTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEIL 273 (283)
T ss_pred c----ccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 1 457899999999999999999999864322111 12233445567899999999999999999999999999
Q ss_pred HHHhhh
Q psy4039 504 TVCQLY 509 (588)
Q Consensus 504 ~~L~~~ 509 (588)
+.|+.+
T Consensus 274 ~~l~~~ 279 (283)
T PHA02988 274 YNLSLY 279 (283)
T ss_pred HHHHHH
Confidence 988754
No 54
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-41 Score=363.46 Aligned_cols=247 Identities=20% Similarity=0.332 Sum_probs=197.1
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+...+|++.+.||+|+||.||+|.+. ++.||||... ...+.+|+.+++.+ +
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----------------------~~~~~~E~~il~~l----~ 141 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----------------------RGGTATEAHILRAI----N 141 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----------------------hhhhHHHHHHHHhC----C
Confidence 44578999999999999999999987 7899999752 12345799999987 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||||+++++|.... ..+++||++.++|..++.... .+++.+++.++.||+
T Consensus 142 HpnIv~~~~~~~~~~----------------------------~~~lv~e~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~ 192 (391)
T PHA03212 142 HPSIIQLKGTFTYNK----------------------------FTCLILPRYKTDLYCYLAAKR-NIAICDILAIERSVL 192 (391)
T ss_pred CCCCCCEeEEEEECC----------------------------eeEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 999999999987632 489999999999999987654 789999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++||+||||||+|||++.+ +.+||+|||+|+....... .......||+.|+|||++.+..
T Consensus 193 ~aL~ylH~~~IvHrDiKP~NIll~~~-----~~vkL~DFG~a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~---- 259 (391)
T PHA03212 193 RAIQYLHENRIIHRDIKAENIFINHP-----GDVCLGDFGAACFPVDINA----NKYYGWAGTIATNAPELLARDP---- 259 (391)
T ss_pred HHHHHHHhCCcccCCCChHhEEEcCC-----CCEEEEeCCcccccccccc----cccccccCccCCCChhhhcCCC----
Confidence 99999999999999999999999987 7899999999975322111 1112457999999999997654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccc---------------------ccc-------------c----cccCC
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------------------DYE-------------V----NALPQ 472 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------------------~~~-------------~----~~~~~ 472 (588)
++.++|||||||++|||++|..||....... .+. . ...+.
T Consensus 260 --~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (391)
T PHA03212 260 --YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPG 337 (391)
T ss_pred --CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCC
Confidence 4578999999999999999998875421000 000 0 00000
Q ss_pred -C-----CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 473 -L-----NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 473 -~-----~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
. ...+|.++.+||.+||+.||.+|||++|+++ |||++.
T Consensus 338 ~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~---------hp~f~~ 381 (391)
T PHA03212 338 SRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD---------FAAFQD 381 (391)
T ss_pred CCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc---------Chhhcc
Confidence 0 0135678999999999999999999999999 999974
No 55
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.7e-41 Score=361.12 Aligned_cols=261 Identities=20% Similarity=0.314 Sum_probs=205.6
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
..+..++|++.+.||+|+||.||+|.+. +..||||++....... ......+.+|+.+++.+
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~il~~~--- 100 (370)
T cd05596 38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK--------------RSDSAFFWEERDIMAHA--- 100 (370)
T ss_pred CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhhHHHHHHHHHHHHhC---
Confidence 4456689999999999999999999987 7899999985311100 01223356788898887
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+.. .+|+||||+ +|+|.+++... .+++..+..++.
T Consensus 101 -~h~~iv~~~~~~~~~~----------------------------~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~ 149 (370)
T cd05596 101 -NSEWIVQLHYAFQDDK----------------------------YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTA 149 (370)
T ss_pred -CCCCcceEEEEEecCC----------------------------EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHH
Confidence 9999999999887632 499999999 68999999765 789999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
||+.||.|||++||+||||||+|||++.+ +.+||+|||+++......... ....+||+.|||||++.+...
T Consensus 150 qi~~aL~~LH~~~ivHrDLkp~NILl~~~-----~~~kL~DfG~~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~ 220 (370)
T cd05596 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKS-----GHLKLADFGTCMKMDANGMVR----CDTAVGTPDYISPEVLKSQGG 220 (370)
T ss_pred HHHHHHHHHHHCCeeccCCCHHHEEEcCC-----CCEEEEeccceeeccCCCccc----CCCCCCCcCeECHHHhccCCC
Confidence 99999999999999999999999999987 899999999998754322111 124579999999999976432
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc----ccCCCC--CCccHHHHHHHHHhhhhCCCC--CCCH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN----ALPQLN--TNVPEVMRRLVAKLLENDPSD--RPSA 499 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~----~~~~~~--~~~~~~l~~Li~~~L~~dP~~--Rps~ 499 (588)
...++.++|||||||++|||++|+.||.+......+... ....++ ..+|.++++||.+||+.+|.+ |+++
T Consensus 221 --~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~ 298 (370)
T cd05596 221 --DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGV 298 (370)
T ss_pred --CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCH
Confidence 111457899999999999999999999875332221111 111222 257899999999999999987 9999
Q ss_pred HHHHHHHhhhhhcCCccccC
Q psy4039 500 ELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~ 519 (588)
+++++ |||++.
T Consensus 299 ~ell~---------h~~~~~ 309 (370)
T cd05596 299 DEIKS---------HPFFKN 309 (370)
T ss_pred HHHhc---------CcccCC
Confidence 99999 999974
No 56
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.8e-41 Score=359.50 Aligned_cols=256 Identities=21% Similarity=0.327 Sum_probs=199.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||+||+|.+. ++.||||++...... . ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~---~~~~~~~~~E~~il~~l----~h~~ 62 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-----------E---KEQVAHVRAERDILAEA----DNPW 62 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-----------h---hhHHHHHHHHHHHHHhC----CCCC
Confidence 47999999999999999999996 789999999531100 0 01123456789999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|++++++|.+.. .+|+||||+ +|+|.+++...+ .+++..+..++.|++.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~a 113 (364)
T cd05599 63 VVKLYYSFQDEN----------------------------YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILA 113 (364)
T ss_pred CcceEEEEEcCC----------------------------eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999988632 499999999 689999998754 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc-----------------------------
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY----------------------------- 403 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~----------------------------- 403 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++..........
T Consensus 114 L~~lH~~~ivH~Dlkp~NIl~~~~-----~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (364)
T cd05599 114 IDSIHKLGYIHRDIKPDNLLLDAK-----GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETW 188 (364)
T ss_pred HHHHHHCCeEeccCCHHHeEECCC-----CCEEEeecccceeccccccccccccccccccccccccccccccccccccch
Confidence 999999999999999999999988 8999999999976432111000
Q ss_pred ----ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc----ccccCCC--
Q psy4039 404 ----SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----VNALPQL-- 473 (588)
Q Consensus 404 ----~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----~~~~~~~-- 473 (588)
.......+||+.|+|||++.... ++.++|||||||++|||++|..||.+........ ......+
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 262 (364)
T cd05599 189 KRNRRALAYSTVGTPDYIAPEVFLQTG------YNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPD 262 (364)
T ss_pred hhcccccccccccCccccCHHHHcCCC------CCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCC
Confidence 00011346999999999987654 4578999999999999999999997643221111 0011112
Q ss_pred CCCccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCccccC
Q psy4039 474 NTNVPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 474 ~~~~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~w~~~ 519 (588)
...++++++++|.+||. +|.+|++ ++++++ |||++.
T Consensus 263 ~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~---------h~~~~~ 301 (364)
T cd05599 263 EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS---------HPFFKG 301 (364)
T ss_pred CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc---------CCCcCC
Confidence 23578999999999996 9999998 999888 999974
No 57
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.3e-41 Score=359.05 Aligned_cols=258 Identities=21% Similarity=0.304 Sum_probs=197.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||+||+|.+. ++.||||++....... ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~E~~il~~~----~~~~ 62 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE--------------KEQVGHIRAERDILVEA----DSLW 62 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH--------------hhHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 7899999995311100 00123456788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .+|+||||+ +|+|.+++...+ .+++.++..++.|++.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~a 113 (363)
T cd05628 63 VVKMFYSFQDKL----------------------------NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLA 113 (363)
T ss_pred cceEEEEEecCC----------------------------eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999998754 89999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc------------------------------
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ------------------------------ 402 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~------------------------------ 402 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+|+.........
T Consensus 114 L~~lH~~givHrDlKp~NILi~~~-----~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (363)
T cd05628 114 IDSIHQLGFIHRDIKPDNLLLDSK-----GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRN 188 (363)
T ss_pred HHHHHhCCeEecCCCHHHeEECCC-----CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhc
Confidence 999999999999999999999987 799999999997643211000
Q ss_pred cccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc----ccCCCC--CC
Q psy4039 403 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN----ALPQLN--TN 476 (588)
Q Consensus 403 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~----~~~~~~--~~ 476 (588)
........+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+......+... ....++ ..
T Consensus 189 ~~~~~~~~~Gt~~Y~aPE~~~~~~------~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 262 (363)
T cd05628 189 RRQLAFSTVGTPDYIAPEVFMQTG------YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVP 262 (363)
T ss_pred cccccccccCCccccCHHHHcCCC------CCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCC
Confidence 000012457999999999997654 457899999999999999999999764322221110 111122 24
Q ss_pred ccHHHHHHHHHhhh--hCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 477 VPEVMRRLVAKLLE--NDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 477 ~~~~l~~Li~~~L~--~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+++++++++.+|+. .++..||+++++++ |||++..
T Consensus 263 ~s~~~~~li~~l~~~~~~r~~r~~~~ei~~---------hp~f~~~ 299 (363)
T cd05628 263 ISEKAKDLILRFCCEWEHRIGAPGVEEIKT---------NPFFEGV 299 (363)
T ss_pred CCHHHHHHHHHHcCChhhcCCCCCHHHHhC---------CCCCCCC
Confidence 78899999999764 23345689999988 9999743
No 58
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=7.5e-41 Score=342.00 Aligned_cols=256 Identities=23% Similarity=0.293 Sum_probs=196.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||+||+|.++ ++.||+|.+........ ......+|+.+++.+.. .+||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~~-~~h~ni 64 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG---------------LPLSTVREVALLKRLEA-FDHPNI 64 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC---------------CchHHHHHHHHHHHhhh-cCCCCe
Confidence 4889999999999999999987 78999999853211110 11233457777666522 279999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ......++++||++.++|.+++.... ..+++.++..++.|++.||
T Consensus 65 ~~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al 121 (288)
T cd07863 65 VRLMDVCATSR-----------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGL 121 (288)
T ss_pred eeeeeeecccc-----------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 99999887531 11223589999999889999987643 3589999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++....... .....||+.|+|||++.+.. +
T Consensus 122 ~~lH~~~ivH~dikp~Nili~~~-----~~~kl~dfg~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~------~ 184 (288)
T cd07863 122 DFLHANCIVHRDLKPENILVTSG-----GQVKLADFGLARIYSCQMA------LTPVVVTLWYRAPEVLLQST------Y 184 (288)
T ss_pred HHHHhCCeecCCCCHHHEEECCC-----CCEEECccCccccccCccc------CCCccccccccCchHhhCCC------C
Confidence 99999999999999999999987 7899999999976543211 11356899999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc---------------cc------c--------ccCCCCCCccHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---------------EV------N--------ALPQLNTNVPEVMRRL 484 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---------------~~------~--------~~~~~~~~~~~~l~~L 484 (588)
+.++||||+||++|||++|.+||......... .. . ........++++++++
T Consensus 185 ~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (288)
T cd07863 185 ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQL 264 (288)
T ss_pred CCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHH
Confidence 57899999999999999999999653111000 00 0 0001123577889999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 485 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 485 i~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+.+||+.||++|||+.+++. ||||
T Consensus 265 i~~~L~~dP~~R~t~~~~l~---------hp~f 288 (288)
T cd07863 265 LLEMLTFNPHKRISAFRALQ---------HPFF 288 (288)
T ss_pred HHHHhccCcccCCCHHHHhc---------CCCC
Confidence 99999999999999999999 9996
No 59
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-41 Score=354.08 Aligned_cols=249 Identities=26% Similarity=0.300 Sum_probs=200.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++....... ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~~----~h~~ 62 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK--------------LNEVRHVLTERDILTTT----KSEW 62 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh--------------hhHHHHHHHHHHHHHhC----CCCC
Confidence 47999999999999999999996 7899999985311000 00123456788898887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..|+||||+ +|+|.+++.... .+++.++..++.||+.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~ 113 (333)
T cd05600 63 LVKLLYAFQDDE----------------------------YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEA 113 (333)
T ss_pred CccEEEEEEcCC----------------------------EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 599999999 689999997654 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++.... ......||+.|+|||++.+..
T Consensus 114 l~~lH~~~ivH~dlkp~Nil~~~~-----~~~kL~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~~~------ 174 (333)
T cd05600 114 VDALHELGYIHRDLKPENFLIDAS-----GHIKLTDFGLSKGIVT--------YANSVVGSPDYMAPEVLRGKG------ 174 (333)
T ss_pred HHHHHHCCccccCCCHHHEEECCC-----CCEEEEeCcCCccccc--------ccCCcccCccccChhHhcCCC------
Confidence 999999999999999999999987 7999999999976533 112457999999999997664
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc------c-cccCCCC---CCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE------V-NALPQLN---TNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~------~-~~~~~~~---~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
++.++|||||||++|||++|..||........+. . ...+... ..+++++.+++.+||..+|.+||+++++
T Consensus 175 ~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~l 254 (333)
T cd05600 175 YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDI 254 (333)
T ss_pred CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHH
Confidence 4578999999999999999999997642211110 0 1111111 2568999999999999999999999999
Q ss_pred HHHHhhhhhcCCccccC
Q psy4039 503 ATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~~ 519 (588)
++ |||+..
T Consensus 255 l~---------h~~~~~ 262 (333)
T cd05600 255 KN---------HPFFKE 262 (333)
T ss_pred Hh---------CcccCC
Confidence 99 999974
No 60
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.2e-41 Score=354.32 Aligned_cols=246 Identities=22% Similarity=0.316 Sum_probs=196.3
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||++.+. ++.||||++........ .....+.+|+.+++.+ +||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--------------~~~~~~~~E~~~l~~l----~hp~iv~~~~ 62 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAK--------------DEVAHTLTESRVLKNT----RHPFLTSLKY 62 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhC----CCCCCcceEE
Confidence 46999999999999986 78999999853211100 0123455688888887 9999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+++||||+ +|+|..++.... .+++.++..++.||+.||.|||+
T Consensus 63 ~~~~~~----------------------------~~~lv~Ey~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~ 113 (328)
T cd05593 63 SFQTKD----------------------------RLCFVMEYVNGGELFFHLSRER-VFSEDRTRFYGAEIVSALDYLHS 113 (328)
T ss_pred EEEcCC----------------------------EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 887632 499999999 689998887654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++|
T Consensus 114 ~~ivHrDikp~NIll~~~-----~~~kL~DfG~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 177 (328)
T cd05593 114 GKIVYRDLKLENLMLDKD-----GHIKITDFGLCKEGITDAA-----TMKTFCGTPEYLAPEVLEDND------YGRAVD 177 (328)
T ss_pred CCeEecccCHHHeEECCC-----CcEEEecCcCCccCCCccc-----ccccccCCcCccChhhhcCCC------CCccCC
Confidence 999999999999999987 7899999999875322111 112457999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLYLW 511 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~~~ 511 (588)
||||||++|||++|+.||.......... ......++..+++++.++|.+||+.||++|| ++.++++
T Consensus 178 iwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~------- 250 (328)
T cd05593 178 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR------- 250 (328)
T ss_pred ccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc-------
Confidence 9999999999999999997643221111 1123346678899999999999999999997 8999888
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|||+..
T Consensus 251 --h~~~~~ 256 (328)
T cd05593 251 --HSFFTG 256 (328)
T ss_pred --CCCcCC
Confidence 999864
No 61
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-41 Score=355.48 Aligned_cols=254 Identities=23% Similarity=0.288 Sum_probs=197.0
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|++.+.||+|+||.||+|.+. +..||||++....... .....+.+|+.+++.+ +||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h~ 80 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ---------------THAKRAYRELVLLKCV----NHK 80 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch---------------hHHHHHHHHHHHHHhC----CCC
Confidence 489999999999999999999886 7899999984321100 0123345688888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.... .......+|+||||++++|.+.+.. .+++..+..++.|++.|
T Consensus 81 niv~~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~ 135 (359)
T cd07876 81 NIISLLNVFTPQK----------------------SLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCG 135 (359)
T ss_pred CEeeeeeeeccCC----------------------CccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHH
Confidence 9999999987532 1112234899999999888887753 68999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++....... .....||+.|+|||++.+..
T Consensus 136 L~~LH~~~ivHrDlkp~NIl~~~~-----~~~kl~Dfg~a~~~~~~~~------~~~~~~t~~y~aPE~~~~~~------ 198 (359)
T cd07876 136 IKHLHSAGIIHRDLKPSNIVVKSD-----CTLKILDFGLARTACTNFM------MTPYVVTRYYRAPEVILGMG------ 198 (359)
T ss_pred HHHHHhCCcccCCCCHHHEEECCC-----CCEEEecCCCccccccCcc------CCCCcccCCCCCchhccCCC------
Confidence 999999999999999999999987 8999999999976433211 12356899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc----------------------c--cccc------------------
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----------------------E--VNAL------------------ 470 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----------------------~--~~~~------------------ 470 (588)
++.++|||||||++|||++|+.||.+......+ . ....
T Consensus 199 ~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (359)
T cd07876 199 YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFP 278 (359)
T ss_pred CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccc
Confidence 457899999999999999999999753110000 0 0000
Q ss_pred --CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 471 --PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 471 --~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.......++++++||.+||+.||++|||++|+++ |||+.
T Consensus 279 ~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~---------hp~~~ 319 (359)
T cd07876 279 SESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR---------HPYIT 319 (359)
T ss_pred cccccccccchhHHHHHHHHhccCcccCCCHHHHhc---------Cchhh
Confidence 0011224678999999999999999999999999 99987
No 62
>KOG4717|consensus
Probab=100.00 E-value=9.3e-42 Score=351.87 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=214.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.-|++.+.||+|-|++|-.|++- |..||||++.+.....- ....+-.|+.-|+.+ +|||
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~---------------st~hlfqEVRCMKLV----QHpN 78 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL---------------STGHLFQEVRCMKLV----QHPN 78 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh---------------hhhHHHHHHHHHHHh----cCcC
Confidence 55889999999999999999886 99999999976443321 223344588888776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+||++...+. .+|+|+|.. +|+|.+||-++...+++..+.+++.||+.|
T Consensus 79 iVRLYEViDTQT----------------------------KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A 130 (864)
T KOG4717|consen 79 IVRLYEVIDTQT----------------------------KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA 130 (864)
T ss_pred eeeeeehhcccc----------------------------eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 999999876642 499999999 579999999887799999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|+|...+|||||||+||.+-+.- +-+||+|||++-.+..+.... +.||++.|.|||++.+..+
T Consensus 131 I~YCHqLHVVHRDLKPENVVFFEKl----GlVKLTDFGFSNkf~PG~kL~------TsCGSLAYSAPEILLGDsY----- 195 (864)
T KOG4717|consen 131 ISYCHQLHVVHRDLKPENVVFFEKL----GLVKLTDFGFSNKFQPGKKLT------TSCGSLAYSAPEILLGDSY----- 195 (864)
T ss_pred HHHHhhhhhhcccCCcceeEEeeec----CceEeeeccccccCCCcchhh------cccchhhccCchhhhcCcc-----
Confidence 9999999999999999999887663 899999999998877765432 6789999999999998763
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc--cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY--EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
+.+++||||+|||||.|+||++||......... .......+|..++.++++||..||..||.+|-+.+++..
T Consensus 196 DAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s------ 269 (864)
T KOG4717|consen 196 DAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS------ 269 (864)
T ss_pred CCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc------
Confidence 456799999999999999999999875433322 233445678889999999999999999999999999999
Q ss_pred hcCCccccCC
Q psy4039 511 WAPKHWLYGA 520 (588)
Q Consensus 511 ~~~h~w~~~~ 520 (588)
++|++..
T Consensus 270 ---~~Wlq~~ 276 (864)
T KOG4717|consen 270 ---TSWLQAG 276 (864)
T ss_pred ---cccccCC
Confidence 9999933
No 63
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.6e-41 Score=351.82 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=197.0
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||+|+||.||+|.+. ++.||||++.+...... ...+.+.+|+.++..+.+ ++||||+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~l~~e~~~~~~~~~-l~hp~i~ 65 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR--------------DEVESLMCEKRIFETANS-ERHPFLV 65 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhccc-cCCCChh
Confidence 678899999999999999986 78999999953211100 012234456665544322 3899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+.. .+|+||||+ +++|..++... .+++..+..++.||+.||.
T Consensus 66 ~~~~~~~~~~----------------------------~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~ 115 (324)
T cd05589 66 NLFACFQTED----------------------------HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQ 115 (324)
T ss_pred ceeeEEEcCC----------------------------EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHH
Confidence 9999987632 499999999 57998888654 7999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+|||++.+ +.+||+|||+++...... ......+||+.|||||++.+.. ++
T Consensus 116 ~lH~~~ivHrdlkp~Nill~~~-----~~~kL~Dfg~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~------~~ 179 (324)
T cd05589 116 YLHENKIVYRDLKLDNLLLDTE-----GFVKIADFGLCKEGMGFG-----DRTSTFCGTPEFLAPEVLTETS------YT 179 (324)
T ss_pred HHHhCCeEecCCCHHHeEECCC-----CcEEeCcccCCccCCCCC-----CcccccccCccccCHhHhcCCC------CC
Confidence 9999999999999999999988 799999999987532211 1112467999999999997654 45
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHh
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQ 507 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~ 507 (588)
.++|||||||++|||++|+.||.+........ ....+..+..+++++.++|.+||+.||.+|| ++.++++
T Consensus 180 ~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~--- 256 (324)
T cd05589 180 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK--- 256 (324)
T ss_pred cccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh---
Confidence 78999999999999999999997643221111 1122345677899999999999999999999 6788777
Q ss_pred hhhhcCCccccC
Q psy4039 508 LYLWAPKHWLYG 519 (588)
Q Consensus 508 ~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 ------~~~f~~ 262 (324)
T cd05589 257 ------QPFFRD 262 (324)
T ss_pred ------CCCcCC
Confidence 999864
No 64
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-41 Score=352.46 Aligned_cols=247 Identities=19% Similarity=0.267 Sum_probs=194.5
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||+||+|.++ ++.||||++.+...... .....+..|+.++..+ .+||||+++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~l~~~---~~h~~iv~~~~ 63 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD--------------DDVECTMTEKRILSLA---RNHPFLTQLYC 63 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhc--------------cHHHHHHHHHHHHHhc---cCCCchhceee
Confidence 46999999999999987 78999999853111000 0122344577777655 47999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+|+||||+ +|+|.+++.... .+++..+..++.|++.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~ 114 (320)
T cd05590 64 CFQTPD----------------------------RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHD 114 (320)
T ss_pred EEEcCC----------------------------EEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 489999999 579999987654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivH~dlkp~NIli~~~-----~~~kL~DfG~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (320)
T cd05590 115 KGIIYRDLKLDNVLLDHE-----GHCKLADFGMCKEGIFNGK-----TTSTFCGTPDYIAPEILQEML------YGPSVD 178 (320)
T ss_pred CCeEeCCCCHHHeEECCC-----CcEEEeeCCCCeecCcCCC-----cccccccCccccCHHHHcCCC------CCCccc
Confidence 999999999999999987 7899999999875322111 112457999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH------HHHHHHHhhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA------ELAATVCQLYL 510 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~------~e~l~~L~~~~ 510 (588)
||||||++|||++|+.||........+. .......+..+++++++++.+||+.||.+||++ +++++
T Consensus 179 iwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~------ 252 (320)
T cd05590 179 WWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR------ 252 (320)
T ss_pred hhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc------
Confidence 9999999999999999997643222111 112234556789999999999999999999998 78777
Q ss_pred hcCCccccC
Q psy4039 511 WAPKHWLYG 519 (588)
Q Consensus 511 ~~~h~w~~~ 519 (588)
|||+..
T Consensus 253 ---h~~f~~ 258 (320)
T cd05590 253 ---HPFFKE 258 (320)
T ss_pred ---CCCcCC
Confidence 999974
No 65
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.4e-41 Score=357.45 Aligned_cols=256 Identities=19% Similarity=0.211 Sum_probs=197.1
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|++.+.||+|+||+||+|++. ++.||||++........ .....+.+|+.+++.+ +||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~--------------~~~~~~~~E~~il~~l----~h~~i 63 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNR--------------NQVAHVKAERDILAEA----DNEWV 63 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh--------------HHHHHHHHHHHHHHhc----CCCCe
Confidence 6889999999999999999986 78999999953221110 0123456788999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++++++.+.. .+|+||||+ +|+|.+++.... .+++..+..++.||+.||
T Consensus 64 v~l~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL 114 (381)
T cd05626 64 VKLYYSFQDKD----------------------------NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAI 114 (381)
T ss_pred eeeEEEEecCC----------------------------EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 99999988632 499999999 689999998754 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc--------------------------------
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM-------------------------------- 401 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~-------------------------------- 401 (588)
.|||+.||+||||||+|||++.+ +.+||+|||+++........
T Consensus 115 ~~LH~~givHrDlKp~Nili~~~-----~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (381)
T cd05626 115 ESVHKMGFIHRDIKPDNILIDLD-----GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRL 189 (381)
T ss_pred HHHHhCCeeecCCcHHHEEECCC-----CCEEEeeCcCCcccccccccccccccccccccccCccccccccccccccccc
Confidence 99999999999999999999987 79999999998643210000
Q ss_pred ----------ccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc------
Q psy4039 402 ----------QYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------ 465 (588)
Q Consensus 402 ----------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------ 465 (588)
.........+||+.|+|||++.+.. ++.++|||||||++|||++|..||.........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~ 263 (381)
T cd05626 190 KTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG------YTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINW 263 (381)
T ss_pred chhhccccccccccccccccCCccccCHHHHcCCC------CCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcc
Confidence 0000012457999999999997654 457899999999999999999999764321111
Q ss_pred cccccCCCCCCccHHHHHHHHHhh--hhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 466 EVNALPQLNTNVPEVMRRLVAKLL--ENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 466 ~~~~~~~~~~~~~~~l~~Li~~~L--~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
......+....+++++++||.+|+ ..+|..||+++++++ |||+..
T Consensus 264 ~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~---------hp~f~~ 310 (381)
T cd05626 264 ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA---------HPFFSE 310 (381)
T ss_pred ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc---------CcccCC
Confidence 011111122357899999999955 556667999999999 999974
No 66
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=5.2e-41 Score=354.89 Aligned_cols=254 Identities=23% Similarity=0.269 Sum_probs=197.3
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|++.+.||+|+||.||+|.+. ++.||||.+....... .....+.+|+.+++.+ +||
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h~ 76 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ---------------THAKRAYRELVLMKCV----NHK 76 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh---------------HHHHHHHHHHHHHHHh----CCC
Confidence 389999999999999999999886 7899999985321110 0123345688888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.... ........|+||||++++|.+++.. .+++..+..++.|+++|
T Consensus 77 niv~~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~a 131 (355)
T cd07874 77 NIISLLNVFTPQK----------------------SLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCG 131 (355)
T ss_pred chhceeeeeeccc----------------------cccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHH
Confidence 9999999987532 1112235899999999888888754 68999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++....... .....||+.|+|||++.+..
T Consensus 132 L~~LH~~givHrDikp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~------ 194 (355)
T cd07874 132 IKHLHSAGIIHRDLKPSNIVVKSD-----CTLKILDFGLARTAGTSFM------MTPYVVTRYYRAPEVILGMG------ 194 (355)
T ss_pred HHHHHhCCcccCCCChHHEEECCC-----CCEEEeeCcccccCCCccc------cCCccccCCccCHHHHcCCC------
Confidence 999999999999999999999987 7999999999986543221 11356899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc--------------------------------cccc-----------
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY--------------------------------EVNA----------- 469 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~--------------------------------~~~~----------- 469 (588)
++.++|||||||++|||++|+.||.+......+ ....
T Consensus 195 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (355)
T cd07874 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFP 274 (355)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccc
Confidence 457899999999999999999999653110000 0000
Q ss_pred -cCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 470 -LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 470 -~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
....+...+.++++||.+||+.||++|||++|+++ |||+.
T Consensus 275 ~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~---------hp~~~ 315 (355)
T cd07874 275 ADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ---------HPYIN 315 (355)
T ss_pred cccccccccchHHHHHHHHHhcCCchhcCCHHHHhc---------Ccchh
Confidence 00011224567899999999999999999999999 99996
No 67
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.3e-41 Score=353.91 Aligned_cols=259 Identities=20% Similarity=0.284 Sum_probs=202.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++....... ......+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~i~~~~----~~~~ 62 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA--------------QETVSFFEEERDILSIS----NSPW 62 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhHHHHHHHHHHHHHhC----CCCC
Confidence 47999999999999999999986 7899999995321100 01223456688888776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+ +|+|.+++......+++..+..++.|++.|
T Consensus 63 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~a 114 (330)
T cd05601 63 IPQLQYAFQDKD----------------------------NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLA 114 (330)
T ss_pred CcceeeEEecCC----------------------------eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999887632 489999999 689999998875589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++.+ +.+||+|||++......... ......||+.|+|||++..........
T Consensus 115 L~~lH~~~i~H~Dlkp~NIll~~~-----~~~kL~Dfg~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~ 185 (330)
T cd05601 115 IHSVHQMGYVHRDIKPENVLIDRT-----GHIKLADFGSAARLTANKMV----NSKLPVGTPDYIAPEVLTTMNGDGKGT 185 (330)
T ss_pred HHHHHHCCeEcccCchHheEECCC-----CCEEeccCCCCeECCCCCce----eeecccCCccccCHHHhccccccccCC
Confidence 999999999999999999999987 89999999999876442211 111356999999999987432211122
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
++.++|||||||++|||++|..||........+.. ..... ....+++++.+|+.+||. ||.+||+++++++
T Consensus 186 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~-- 262 (330)
T cd05601 186 YGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC-- 262 (330)
T ss_pred CCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC--
Confidence 45789999999999999999999976432211111 11111 223578999999999998 9999999999998
Q ss_pred hhhhhcCCccccC
Q psy4039 507 QLYLWAPKHWLYG 519 (588)
Q Consensus 507 ~~~~~~~h~w~~~ 519 (588)
|||+..
T Consensus 263 -------h~~~~~ 268 (330)
T cd05601 263 -------HPFFSK 268 (330)
T ss_pred -------CCCcCC
Confidence 999974
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-41 Score=352.54 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=195.9
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||++.+. |..||+|++....... ......+.+|+.+++.+ +||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------~~~~~~~~~E~~~l~~l----~hp~i~~~~~ 62 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------------KDEVAHTVTESRVLQNT----RHPFLTALKY 62 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--------------hHHHHHHHHHHHHHHhC----CCCCCcceee
Confidence 46999999999999986 7899999985311000 00122345688888887 9999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
+|.+.. .+|+||||+ +|+|..++.... .+++..+..++.||+.||.|||+
T Consensus 63 ~~~~~~----------------------------~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~ 113 (323)
T cd05595 63 AFQTHD----------------------------RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHS 113 (323)
T ss_pred EEecCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 887632 499999999 689998887654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++|
T Consensus 114 ~~ivH~Dlkp~NIll~~~-----~~~kL~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 177 (323)
T cd05595 114 RDVVYRDIKLENLMLDKD-----GHIKITDFGLCKEGISDGA-----TMKTFCGTPEYLAPEVLEDND------YGRAVD 177 (323)
T ss_pred CCeEecCCCHHHEEEcCC-----CCEEecccHHhccccCCCC-----ccccccCCcCcCCcccccCCC------CCchhc
Confidence 999999999999999987 7899999999875322111 112457999999999987654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLYLW 511 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~~~ 511 (588)
||||||++|||++|+.||.......... ......++..++++++++|.+||+.||.+|| ++.++++
T Consensus 178 iwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~------- 250 (323)
T cd05595 178 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME------- 250 (323)
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc-------
Confidence 9999999999999999997643222111 1122345678899999999999999999998 8999888
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|+|+..
T Consensus 251 --h~~~~~ 256 (323)
T cd05595 251 --HRFFLS 256 (323)
T ss_pred --CCCcCC
Confidence 999974
No 69
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.4e-41 Score=349.91 Aligned_cols=252 Identities=19% Similarity=0.280 Sum_probs=197.5
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. ++.||||++.......+ ...+.+..|+.++..+ ..|++|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--------------~~~~~~~~e~~~l~~~---~~~~~i 63 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQD--------------DDVECTMVEKRVLALP---GKPPFL 63 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhc---CCCCce
Confidence 5889999999999999999987 57899999853211000 0122345677777766 245668
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. .+|+||||+ +|+|.+++.... .+++..+..++.||+.||
T Consensus 64 ~~~~~~~~~~~----------------------------~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al 114 (324)
T cd05587 64 TQLHSCFQTMD----------------------------RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGL 114 (324)
T ss_pred eeeEEEEEcCC----------------------------EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 89998887632 499999999 689999997654 789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++...... ......+||+.|+|||++.+.. +
T Consensus 115 ~~lH~~~ivH~dlkp~Nill~~~-----~~~kL~Dfg~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~------~ 178 (324)
T cd05587 115 FFLHSKGIIYRDLKLDNVMLDAE-----GHIKIADFGMCKENIFGG-----KTTRTFCGTPDYIAPEIIAYQP------Y 178 (324)
T ss_pred HHHHHCCeEecCCCHHHeEEcCC-----CCEEEeecCcceecCCCC-----CceeeecCCccccChhhhcCCC------C
Confidence 99999999999999999999987 789999999987532211 1112467999999999997665 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----HHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----ELAATVC 506 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~e~l~~L 506 (588)
+.++||||+||++|||++|+.||.+......+. ....+.++..+++++.+++.+||+.||.+|++. +++++
T Consensus 179 ~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~-- 256 (324)
T cd05587 179 GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE-- 256 (324)
T ss_pred CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc--
Confidence 578999999999999999999997643221111 122334567789999999999999999999986 67777
Q ss_pred hhhhhcCCccccC
Q psy4039 507 QLYLWAPKHWLYG 519 (588)
Q Consensus 507 ~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 -------hp~~~~ 262 (324)
T cd05587 257 -------HAFFRR 262 (324)
T ss_pred -------CCCcCC
Confidence 999864
No 70
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.6e-41 Score=357.14 Aligned_cols=260 Identities=20% Similarity=0.302 Sum_probs=201.9
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+..++|++.+.||+|+||.||++.+. ++.||+|++.+..... ......+.+|+.+++.+ +
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~i~~~~----~ 101 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK--------------RSDSAFFWEERDIMAFA----N 101 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhhHHHHHHHHHHHHhC----C
Confidence 34488999999999999999999997 7899999985311100 01123456788888876 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||||+++++++.+.. .+|+||||+ +|+|.+++... .+++..+..++.||
T Consensus 102 hp~iv~~~~~~~~~~----------------------------~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qi 151 (370)
T cd05621 102 SPWVVQLFCAFQDDK----------------------------YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEV 151 (370)
T ss_pred CCCEeeEEEEEEcCC----------------------------EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHH
Confidence 999999999987632 499999999 68999999765 78999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||+|||+++|+||||||+|||++.+ +.+||+|||+|+......... ....+||+.|||||++.+....
T Consensus 152 l~aL~~LH~~~IvHrDLKp~NILl~~~-----~~~kL~DFG~a~~~~~~~~~~----~~~~~gt~~Y~aPE~~~~~~~~- 221 (370)
T cd05621 152 VLALDAIHSMGLIHRDVKPDNMLLDKH-----GHLKLADFGTCMKMDETGMVR----CDTAVGTPDYISPEVLKSQGGD- 221 (370)
T ss_pred HHHHHHHHHCCeEecCCCHHHEEECCC-----CCEEEEecccceecccCCcee----cccCCCCcccCCHHHHhccCCC-
Confidence 999999999999999999999999987 899999999998754322111 1246799999999999765321
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccCCCC--CCccHHHHHHHHHhhhhCCCC--CCCHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALPQLN--TNVPEVMRRLVAKLLENDPSD--RPSAEL 501 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~~~~--~~~~~~l~~Li~~~L~~dP~~--Rps~~e 501 (588)
..++.++||||+||++|||++|+.||........+.. .....++ ..++..+++++.+||..++.+ |+++++
T Consensus 222 -~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e 300 (370)
T cd05621 222 -GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEE 300 (370)
T ss_pred -CCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHH
Confidence 1145789999999999999999999976532221111 1111222 356899999999999855543 889999
Q ss_pred HHHHHhhhhhcCCccccCC
Q psy4039 502 AATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~~ 520 (588)
+++ |||++..
T Consensus 301 ~l~---------hp~~~~~ 310 (370)
T cd05621 301 IKQ---------HPFFKND 310 (370)
T ss_pred Hhc---------CcccCCC
Confidence 998 9999753
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-41 Score=355.05 Aligned_cols=256 Identities=24% Similarity=0.348 Sum_probs=202.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||+||+|.+. ++.||||++....... ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~~----~~~~ 62 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--------------RNQIAHVRAERDILADA----DSPW 62 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--------------ccHHHHHHHHHHHHHhc----CCCC
Confidence 47999999999999999999998 8999999985321100 01223456788899887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .+++||||+ +++|.+++... ..+++..+..++.|++.|
T Consensus 63 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~a 113 (350)
T cd05573 63 IVKLYYSFQDEE----------------------------HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLA 113 (350)
T ss_pred ccchhhheecCC----------------------------eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHH
Confidence 999998887632 499999999 68999999876 389999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc------------------------ccccccc
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM------------------------QYSSADI 408 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~------------------------~~~~~~~ 408 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++........ .......
T Consensus 114 L~~LH~~giiH~Dlkp~NIll~~~-----~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (350)
T cd05573 114 LDSVHKLGFIHRDIKPDNILIDAD-----GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRAN 188 (350)
T ss_pred HHHHHHCCeeccCCCHHHeEECCC-----CCEEeecCCCCccCcccCccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999988 89999999999865442200 0001122
Q ss_pred cccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc------ccccCCCCCCccHHHH
Q psy4039 409 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE------VNALPQLNTNVPEVMR 482 (588)
Q Consensus 409 ~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~l~ 482 (588)
...||+.|+|||++.+.. ++.++|||||||++|||++|+.||........+. .....+....+++++.
T Consensus 189 ~~~gt~~y~aPE~~~~~~------~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~ 262 (350)
T cd05573 189 STVGTPDYIAPEVLRGTP------YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAI 262 (350)
T ss_pred ccccCccccCHHHHcCCC------CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHH
Confidence 456999999999997764 4578999999999999999999997643221111 1111112234699999
Q ss_pred HHHHHhhhhCCCCCCC-HHHHHHHHhhhhhcCCccccC
Q psy4039 483 RLVAKLLENDPSDRPS-AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps-~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++|.+||. ||.+||+ ++++++ |||++.
T Consensus 263 ~li~~ll~-dp~~R~~s~~~ll~---------hp~~~~ 290 (350)
T cd05573 263 DLICRLLC-DPEDRLGSFEEIKS---------HPFFKG 290 (350)
T ss_pred HHHHHHcc-ChhhcCCCHHHHhc---------CCCcCC
Confidence 99999997 9999999 999998 999974
No 72
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.3e-40 Score=345.66 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=189.5
Q ss_pred eeeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 201 GKFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+++||+|+||+||+|.+. ++.||||.+.... ......+|+.+++.+ +||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-------------------~~~~~~~E~~~l~~l----~h~niv~ 62 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-------------------ISMSACREIALLREL----KHPNVIS 62 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-------------------CcHHHHHHHHHHHhc----CCCCCcc
Confidence 468999999999999975 5789999984321 112345699999987 9999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh--------cCCCCHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER--------CAQLSMHERVLLFTQ 348 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~--------~~~l~~~~~~~i~~q 348 (588)
+++++.+.. ...++++|||++++|.+++... ...+++..+..++.|
T Consensus 63 ~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 116 (317)
T cd07868 63 LQKVFLSHA--------------------------DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 116 (317)
T ss_pred eeeeEecCC--------------------------CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHH
Confidence 999886531 1248999999999999988642 125899999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
|+.||.|||++||+||||||+|||++.+.+. .+.+||+|||+|+........ ........||+.|+|||++.+...
T Consensus 117 i~~al~~LH~~~ivHrDlkp~Nil~~~~~~~-~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~- 192 (317)
T cd07868 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPE-RGRVKIADMGFARLFNSPLKP--LADLDPVVVTFWYRAPELLLGARH- 192 (317)
T ss_pred HHHHHHHHHhCCEEcCCCCHHHEEEecCCCC-cCcEEEeecCceeccCCCCcc--ccccCCccccccccCCHHHcCCCC-
Confidence 9999999999999999999999999643222 278999999999876542211 111124678999999999976431
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccc-cccC------------
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEV-NALP------------ 471 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~-~~~~------------ 471 (588)
++.++||||+||++|||++|++||........ +.. ...+
T Consensus 193 ----~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07868 193 ----YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN 268 (317)
T ss_pred ----cCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc
Confidence 45679999999999999999999964211000 000 0000
Q ss_pred ------------CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 472 ------------QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 472 ------------~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
......+.++.+||.+||+.||.+|||++|+++ |||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~---------hp~f 317 (317)
T cd07868 269 TYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ---------DPYF 317 (317)
T ss_pred ccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc---------CCCC
Confidence 000123456899999999999999999999999 9996
No 73
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.3e-41 Score=349.31 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=197.9
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. +..||||++.+...... ........|..++..+ ..||+|
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~l~~~---~~~~~i 63 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQD--------------DDVECTMVEKRVLALS---GKPPFL 63 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhc---cCCCeE
Confidence 5889999999999999999987 67999999853211000 0112234466666655 478999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. .+|+||||+ +|+|.+++.... .+++.++..++.|++.||
T Consensus 64 ~~~~~~~~~~~----------------------------~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL 114 (323)
T cd05616 64 TQLHSCFQTMD----------------------------RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGL 114 (323)
T ss_pred eeEEEEEecCC----------------------------EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 99999887632 499999999 689999987654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. +
T Consensus 115 ~~LH~~~ivHrDlkp~Nill~~~-----~~~kL~DfG~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~ 178 (323)
T cd05616 115 FFLHSKGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKENMWDGV-----TTKTFCGTPDYIAPEIIAYQP------Y 178 (323)
T ss_pred HHHHHCCEEecCCCHHHeEECCC-----CcEEEccCCCceecCCCCC-----ccccCCCChhhcCHHHhcCCC------C
Confidence 99999999999999999999988 7999999999975432111 112467999999999997665 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----HHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----ELAATVC 506 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~e~l~~L 506 (588)
+.++|||||||++|||++|+.||.+........ ......++..+++++.+++.+||+.||++|++. .++++
T Consensus 179 ~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~-- 256 (323)
T cd05616 179 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE-- 256 (323)
T ss_pred CCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc--
Confidence 578999999999999999999997643222111 112234567789999999999999999999984 67666
Q ss_pred hhhhhcCCccccC
Q psy4039 507 QLYLWAPKHWLYG 519 (588)
Q Consensus 507 ~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 -------h~~~~~ 262 (323)
T cd05616 257 -------HAFFRY 262 (323)
T ss_pred -------CCCcCC
Confidence 999863
No 74
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.5e-41 Score=349.39 Aligned_cols=247 Identities=21% Similarity=0.329 Sum_probs=192.7
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||||++....... ....+....|..++..+ ..||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~~---~~hp~i~~~~~ 63 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE--------------DDDVECTMVERRVLALA---WEHPFLTHLFC 63 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhhHHHHHHHHHHHHhc---cCCCCccceee
Confidence 36999999999999987 6789999985311100 00112233455555543 48999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+. ..+|+||||+ +|+|..++.... .+++..+..++.|++.||.|||+
T Consensus 64 ~~~~~----------------------------~~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~ 114 (316)
T cd05592 64 TFQTK----------------------------EHLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHK 114 (316)
T ss_pred EEEcC----------------------------CEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 88763 1499999999 689999987654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
++|+||||||+|||++.+ +.+||+|||+|+....... .....+||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivH~dlkp~Nill~~~-----~~~kL~Dfg~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (316)
T cd05592 115 KGIIYRDLKLDNVLLDKD-----GHIKIADFGMCKENMNGEG-----KASTFCGTPDYIAPEILKGQK------YNESVD 178 (316)
T ss_pred CCEEeCCCCHHHeEECCC-----CCEEEccCcCCeECCCCCC-----ccccccCCccccCHHHHcCCC------CCCccc
Confidence 999999999999999987 7899999999976433211 112467999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH-HHHHHHhhhhhcCCc
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE-LAATVCQLYLWAPKH 515 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~-e~l~~L~~~~~~~h~ 515 (588)
||||||++|||++|..||.+......+. ....+.++..++.++.+++.+||+.||.+||++. ++++ ||
T Consensus 179 vwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~---------h~ 249 (316)
T cd05592 179 WWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ---------HP 249 (316)
T ss_pred chhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc---------Cc
Confidence 9999999999999999997643221111 1233456677899999999999999999999875 6666 99
Q ss_pred cccC
Q psy4039 516 WLYG 519 (588)
Q Consensus 516 w~~~ 519 (588)
|+..
T Consensus 250 ~~~~ 253 (316)
T cd05592 250 FFRG 253 (316)
T ss_pred ccCC
Confidence 9863
No 75
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.8e-41 Score=345.74 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=200.9
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
..++|.+.+.||+|+||.||+|++. +..||||.+....... ....+.+|+.+++.+ +|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------~~~~~~~E~~~l~~l----~h 63 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG----------------APCTAIREVSLLKDL----KH 63 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC----------------cchhHHHHHHHHHhC----CC
Confidence 3478999999999999999999986 7789999985321110 122345689999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||+++++++.+.. ..++||||++++|.+++......+++..+..++.|++.
T Consensus 64 ~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~ 115 (309)
T cd07872 64 ANIVTLHDIVHTDK----------------------------SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILR 115 (309)
T ss_pred CCcceEEEEEeeCC----------------------------eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999987632 48999999998999999876657899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+||||||+|||++.+ +.+||+|||+++........ .....||+.|+|||++.+...
T Consensus 116 aL~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~---- 181 (309)
T cd07872 116 GLAYCHRRKVLHRDLKPQNLLINER-----GELKLADFGLARAKSVPTKT-----YSNEVVTLWYRPPDVLLGSSE---- 181 (309)
T ss_pred HHHHHHHCCeecCCCCHHHEEECCC-----CCEEECccccceecCCCccc-----cccccccccccCCHHHhCCCC----
Confidence 9999999999999999999999987 78999999999764332111 113468999999999865431
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccc------------------------cccccC--------CCCCCccH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------------------------EVNALP--------QLNTNVPE 479 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------------------------~~~~~~--------~~~~~~~~ 479 (588)
++.++||||+||++|||++|+.||.+....... .....+ .....+++
T Consensus 182 -~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (309)
T cd07872 182 -YSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDT 260 (309)
T ss_pred -CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCH
Confidence 456899999999999999999999653211000 000000 11135788
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++++||.+||+.||.+|||++++++ |||++.
T Consensus 261 ~~~~li~~~L~~dp~~R~t~~e~l~---------h~~~~~ 291 (309)
T cd07872 261 EGIELLTKFLQYESKKRISAEEAMK---------HAYFRS 291 (309)
T ss_pred HHHHHHHHhccCChhhCCCHHHHhc---------Chhhhh
Confidence 9999999999999999999999999 999984
No 76
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.2e-41 Score=349.97 Aligned_cols=247 Identities=22% Similarity=0.359 Sum_probs=196.5
Q ss_pred eeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|+||.||++... ++.||||++.......+ ......+.+|+.+++.+ +||||++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~-------------~~~~~~~~~E~~il~~l----~hp~iv~ 64 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRN-------------QKDTAHTKAERNILEAV----KHPFIVD 64 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhh-------------hhhHHHHHHHHHHHHhC----CCCchhc
Confidence 57999999999999863 78899999853211100 00123345789999887 9999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++|.+.. .+|+||||+ +++|.+++...+ .+++..+..++.|++.||.|
T Consensus 65 ~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~ 115 (323)
T cd05584 65 LIYAFQTGG----------------------------KLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEH 115 (323)
T ss_pred eeeEEecCC----------------------------eEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 999987631 489999999 579999997654 78999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||++||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.
T Consensus 116 lH~~~ivH~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~ 179 (323)
T cd05584 116 LHQQGIIYRDLKPENILLDAQ-----GHVKLTDFGLCKESIHEGT-----VTHTFCGTIEYMAPEILMRSG------HGK 179 (323)
T ss_pred HHHCCeecCCCCHHHeEECCC-----CCEEEeeCcCCeecccCCC-----cccccCCCccccChhhccCCC------CCC
Confidence 999999999999999999987 8999999999875432111 112457999999999987654 457
Q ss_pred cCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhh
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQL 508 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~ 508 (588)
++|||||||++|||++|+.||........... .....++..+++++.++|.+||+.||++|| +++++++
T Consensus 180 ~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~---- 255 (323)
T cd05584 180 AVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS---- 255 (323)
T ss_pred cceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc----
Confidence 89999999999999999999976432221111 122345677899999999999999999999 8999888
Q ss_pred hhhcCCccccC
Q psy4039 509 YLWAPKHWLYG 519 (588)
Q Consensus 509 ~~~~~h~w~~~ 519 (588)
|||+..
T Consensus 256 -----h~~~~~ 261 (323)
T cd05584 256 -----HPFFRH 261 (323)
T ss_pred -----CCCcCC
Confidence 999864
No 77
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.7e-41 Score=349.80 Aligned_cols=247 Identities=19% Similarity=0.282 Sum_probs=194.8
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||||++........ .....+..|..++..+ .+||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~il~~~---~~hp~i~~~~~ 63 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD--------------DDVDCTMTEKRILALA---AKHPFLTALHC 63 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh--------------hHHHHHHHHHHHHHhc---cCCCCccceee
Confidence 46999999999999987 67999999853211000 0122344577777655 48999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+|+||||+ +|+|..++.... .+++..+..++.||+.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~ 114 (321)
T cd05591 64 CFQTKD----------------------------RLFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHR 114 (321)
T ss_pred EEEcCC----------------------------eEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 489999999 579999987654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivHrDikp~Nill~~~-----~~~kL~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (321)
T cd05591 115 HGVIYRDLKLDNILLDAE-----GHCKLADFGMCKEGILNGV-----TTTTFCGTPDYIAPEILQELE------YGPSVD 178 (321)
T ss_pred CCeeccCCCHHHeEECCC-----CCEEEeecccceecccCCc-----cccccccCccccCHHHHcCCC------CCCccc
Confidence 999999999999999987 8999999999875432111 112457999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCC-------CHHHHHHHHhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRP-------SAELAATVCQLY 509 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-------s~~e~l~~L~~~ 509 (588)
||||||++|||++|+.||........+.. ......+..+++++.+++.+||+.||++|| +++++++
T Consensus 179 vwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~----- 253 (321)
T cd05591 179 WWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ----- 253 (321)
T ss_pred eechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc-----
Confidence 99999999999999999976432222211 112234556889999999999999999999 8899888
Q ss_pred hhcCCccccC
Q psy4039 510 LWAPKHWLYG 519 (588)
Q Consensus 510 ~~~~h~w~~~ 519 (588)
|||+..
T Consensus 254 ----hp~~~~ 259 (321)
T cd05591 254 ----HPFFKE 259 (321)
T ss_pred ----CCccCC
Confidence 999964
No 78
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.3e-41 Score=349.52 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=194.2
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. +..||||++.......+ ........|..++... .+||||+++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--------------~~~~~~~~e~~~l~~~---~~~~~i~~~~~ 63 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID--------------DDVECTMVEKRVLALA---WENPFLTHLYC 63 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc--------------chHHHHHHHHHHHHhc---cCCCCccCeeE
Confidence 46999999999999997 78999999853111000 0112234466666544 48999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+|+||||+ +|+|..++..+. .+++.++..++.|+++||+|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 114 (316)
T cd05620 64 TFQTKE----------------------------HLFFVMEFLNGGDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLHS 114 (316)
T ss_pred EEEeCC----------------------------EEEEEECCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 599999999 579999987754 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivHrDlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (316)
T cd05620 115 KGIIYRDLKLDNVMLDRD-----GHIKIADFGMCKENVFGDN-----RASTFCGTPDYIAPEILQGLK------YTFSVD 178 (316)
T ss_pred CCeEecCCCHHHeEECCC-----CCEEeCccCCCeecccCCC-----ceeccCCCcCccCHHHHcCCC------CCcccc
Confidence 999999999999999987 7899999999875322111 112467999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-HHHHHHHhhhhhcCCc
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-ELAATVCQLYLWAPKH 515 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-~e~l~~L~~~~~~~h~ 515 (588)
|||+||++|||++|..||.+........ ....+.++..++.++++++.+||+.||++||++ +++++ ||
T Consensus 179 iwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~---------h~ 249 (316)
T cd05620 179 WWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRG---------HP 249 (316)
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc---------CC
Confidence 9999999999999999997643222111 122345566789999999999999999999997 57777 99
Q ss_pred cccC
Q psy4039 516 WLYG 519 (588)
Q Consensus 516 w~~~ 519 (588)
|++.
T Consensus 250 ~f~~ 253 (316)
T cd05620 250 FFKT 253 (316)
T ss_pred CcCC
Confidence 9974
No 79
>KOG0604|consensus
Probab=100.00 E-value=7.8e-42 Score=333.53 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=203.6
Q ss_pred CCeEEe-eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 196 DDIQIG-KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 196 ~~~~~~-~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
++|.+. ++||-|-.|.|..|.++ ++.+|+|++. ......+|+++.-.. ..||
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~----------------------Ds~KARrEVeLHw~~---s~h~ 115 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL----------------------DSPKARREVELHWMA---SGHP 115 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHh----------------------cCHHHHhHhhhhhhh---cCCC
Confidence 777775 68999999999999998 8899999984 222334566654433 4899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLL 350 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~ 350 (588)
|||.++++|+. .+.....+.+|||.+ +|.|.+.+.+++ ..++++++..|++||+
T Consensus 116 ~iV~IidVyeN------------------------s~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~ 171 (400)
T KOG0604|consen 116 HIVSIIDVYEN------------------------SYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIG 171 (400)
T ss_pred ceEEeehhhhh------------------------hccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHH
Confidence 99999999987 233355799999999 689999999875 3599999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.|+.|||+.+|.||||||+|+|......+ ..+||+|||+|+.......+ .+.+-||.|.|||++....
T Consensus 172 ~Av~~lH~~nIAHRDlKpENLLyt~t~~n--a~lKLtDfGFAK~t~~~~~L------~TPc~TPyYvaPevlg~eK---- 239 (400)
T KOG0604|consen 172 LAVRYLHSMNIAHRDLKPENLLYTTTSPN--APLKLTDFGFAKETQEPGDL------MTPCFTPYYVAPEVLGPEK---- 239 (400)
T ss_pred HHHHHHHhcchhhccCChhheeeecCCCC--cceEecccccccccCCCccc------cCCcccccccCHHHhCchh----
Confidence 99999999999999999999999877544 47999999999886542222 2567899999999996654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccc------------cccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR------------NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~------------~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
+...+|+||+||++|-|+||.+||+.... ...|. ...+-|..+|++++|+|+.+|..+|.+|.|
T Consensus 240 --ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~--FP~pEWs~VSe~aKdlIR~LLkt~PteRlT 315 (400)
T KOG0604|consen 240 --YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYE--FPEPEWSCVSEAAKDLIRKLLKTEPTERLT 315 (400)
T ss_pred --cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCcc--CCChhHhHHHHHHHHHHHHHhcCCchhhee
Confidence 44569999999999999999999987421 11121 112335678999999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCccccCC
Q psy4039 499 AELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
++++++ |||+...
T Consensus 316 I~~~m~---------hpwi~~~ 328 (400)
T KOG0604|consen 316 IEEVMD---------HPWINQY 328 (400)
T ss_pred HHHhhc---------Cchhccc
Confidence 999999 9999833
No 80
>KOG0594|consensus
Probab=100.00 E-value=9e-41 Score=336.14 Aligned_cols=261 Identities=26% Similarity=0.322 Sum_probs=205.8
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
...|+..++||+|+||+||+|+.+ |+.||+|+++.... .|.. -....+|+.+++.+ +|+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~------------~EG~---P~taiREisllk~L----~~~ 70 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFE------------EEGV---PSTAIREISLLKRL----SHA 70 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccc------------ccCC---CchhhHHHHHHHHh----CCC
Confidence 466788888999999999999997 88999999964221 0111 22336799999998 999
Q ss_pred c-eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc---CCCCHHHHHHHHHH
Q psy4039 273 N-VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC---AQLSMHERVLLFTQ 348 (588)
Q Consensus 273 N-IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~---~~l~~~~~~~i~~q 348 (588)
| ||.|++++.+... ......+++|+||+.-+|.+++.... ..++...+..+++|
T Consensus 71 ~~iv~L~dv~~~~~~----------------------~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Q 128 (323)
T KOG0594|consen 71 NHIVRLHDVIHTSNN----------------------HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQ 128 (323)
T ss_pred cceEEEEeeeeeccc----------------------ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHH
Confidence 9 9999999987531 12234699999999999999999865 36888999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
|+.||+|||+++|+||||||.||||+++ +.+||+|||+|+...-.... + +..++|..|.|||++.+...
T Consensus 129 ll~gl~~~H~~~IlHRDLKPQNlLi~~~-----G~lKlaDFGlAra~~ip~~~-y----t~evvTlWYRaPEvLlGs~~- 197 (323)
T KOG0594|consen 129 LLRGLAFLHSHGILHRDLKPQNLLISSS-----GVLKLADFGLARAFSIPMRT-Y----TPEVVTLWYRAPEVLLGSTS- 197 (323)
T ss_pred HHHHHHHHHhCCeecccCCcceEEECCC-----CcEeeeccchHHHhcCCccc-c----cccEEEeeccCHHHhcCCCc-
Confidence 9999999999999999999999999987 89999999999976532221 2 24678999999999988752
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc------------------------cccc--cccC------CCCCC
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT------------------------DYEV--NALP------QLNTN 476 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~------------------------~~~~--~~~~------~~~~~ 476 (588)
+++..||||+|||+.||+++++-|.+..... .+.. ..+. ...+.
T Consensus 198 ----Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~ 273 (323)
T KOG0594|consen 198 ----YSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPK 273 (323)
T ss_pred ----CCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccc
Confidence 5678999999999999999999997731100 1110 0000 00012
Q ss_pred ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 477 VPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 477 ~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
..++..+++.+||+.+|.+|.|++.+++ |||+...
T Consensus 274 ~~~~~~dll~~~L~y~p~~R~Sa~~al~---------h~yf~~~ 308 (323)
T KOG0594|consen 274 LDPDGIELLSKLLQYDPAKRISAKGALT---------HPYFSEL 308 (323)
T ss_pred cCccHHHHHHHHhccCcccCcCHHHHhc---------Chhhccc
Confidence 2357899999999999999999999999 9999744
No 81
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.2e-41 Score=349.65 Aligned_cols=247 Identities=18% Similarity=0.272 Sum_probs=194.5
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||||+++....... .....+.+|+.++..+ .+||||+++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~--------------~~~~~~~~e~~il~~~---~~hp~Iv~~~~ 63 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD--------------EDIDWVQTEKHVFETA---SNHPFLVGLHS 63 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhc---cCCCCCCceEE
Confidence 46999999999999986 78999999953211100 0122345688888776 57999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
+|.+.. .+|+||||+ +|+|.+++...+ .+++..+..++.|++.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~e~~~~g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~ 114 (329)
T cd05588 64 CFQTES----------------------------RLFFVIEFVSGGDLMFHMQRQR-KLPEEHARFYSAEISLALNFLHE 114 (329)
T ss_pred EEEcCC----------------------------EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 489999999 579999887654 89999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++...... ......+||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivH~dlkp~Nili~~~-----~~~kL~Dfg~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (329)
T cd05588 115 RGIIYRDLKLDNVLLDAE-----GHIKLTDYGMCKEGIRPG-----DTTSTFCGTPNYIAPEILRGED------YGFSVD 178 (329)
T ss_pred CCeEecCCCHHHeEECCC-----CCEEECcCccccccccCC-----CccccccCCccccCHHHHcCCC------CCCccc
Confidence 999999999999999987 789999999987532211 1112467999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCccccccc-----------cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC------HHH
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNT-----------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS------AEL 501 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps------~~e 501 (588)
||||||++|||++|+.||....... .........++..++.++.+++.+||+.||.+||+ +++
T Consensus 179 iwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~ 258 (329)
T cd05588 179 WWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRD 258 (329)
T ss_pred eechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHH
Confidence 9999999999999999996311000 00112233466788999999999999999999997 678
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||+..
T Consensus 259 i~~---------hp~~~~ 267 (329)
T cd05588 259 IKS---------HPFFRN 267 (329)
T ss_pred Hhc---------CCCCCC
Confidence 888 999963
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.3e-41 Score=358.35 Aligned_cols=256 Identities=20% Similarity=0.234 Sum_probs=198.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++...... . ......+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~-----------~---~~~~~~~~~E~~il~~l----~h~~ 62 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL-----------M---RNQAAHVKAERDILAEA----DNEW 62 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH-----------h---hhhHHHHHHHHHHHHhC----CCCC
Confidence 47999999999999999999987 789999998431100 0 01223456799999987 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++.|.+.. .+|+||||+ +|+|.+++...+ .+++..+..++.||+.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~a 113 (376)
T cd05598 63 VVKLYYSFQDKD----------------------------NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCA 113 (376)
T ss_pred cceEEEEEEcCC----------------------------EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999998764 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc-------------------------------
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM------------------------------- 401 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~------------------------------- 401 (588)
|+|||++||+||||||+|||++.+ +.+||+|||+|..+......
T Consensus 114 l~~lH~~~ivHrDlkp~Nill~~~-----~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (376)
T cd05598 114 IESVHKMGFIHRDIKPDNILIDRD-----GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPL 188 (376)
T ss_pred HHHHHHCCeEeCCCCHHHEEECCC-----CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccch
Confidence 999999999999999999999987 79999999998543210000
Q ss_pred -------ccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc------ccc
Q psy4039 402 -------QYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVN 468 (588)
Q Consensus 402 -------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------~~~ 468 (588)
.........+||+.|||||++.+.. ++.++|||||||++|||++|+.||.+....... ...
T Consensus 189 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 262 (376)
T cd05598 189 ERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG------YTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETT 262 (376)
T ss_pred hhhhhhhcccccccccCCCccccCHHHHcCCC------CCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcc
Confidence 0000012357999999999997665 457899999999999999999999764322111 111
Q ss_pred ccCCCCCCccHHHHHHHHHhhhhCCCCCC---CHHHHHHHHhhhhhcCCccccC
Q psy4039 469 ALPQLNTNVPEVMRRLVAKLLENDPSDRP---SAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 469 ~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp---s~~e~l~~L~~~~~~~h~w~~~ 519 (588)
...+....+++++.++|.+|+ .+|.+|+ +++++++ |||++.
T Consensus 263 ~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~---------h~~~~~ 306 (376)
T cd05598 263 LHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA---------HPFFKG 306 (376)
T ss_pred ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC---------CCCcCC
Confidence 111223467899999999977 5999999 8999998 999974
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-40 Score=349.04 Aligned_cols=265 Identities=20% Similarity=0.265 Sum_probs=208.7
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+..++|++.+.||+|+||.||+|.+. +..+|+|++.... .. .....+.+|+.+++.+ +
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~-------------~~~~~~~~E~~~l~~l----~ 61 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KP-------------AIRNQIIRELQVLHEC----N 61 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CH-------------HHHHHHHHHHHHHHHC----C
Confidence 44588999999999999999999997 7789999985311 00 0123456799999987 8
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||||++++++|.+.. .+++||||+ +|+|.+++.... .+++..+..++.|+
T Consensus 62 h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l 112 (333)
T cd06650 62 SPYIVGFYGAFYSDG----------------------------EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAV 112 (333)
T ss_pred CCcccceeEEEEECC----------------------------EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 999999999998732 499999999 679999998754 78999999999999
Q ss_pred HHHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
+.||.|||+. +|+||||||+|||++.+ +.+||+|||++........ ....||+.|+|||++.+..
T Consensus 113 ~~~l~~lH~~~~ivH~dlkp~Nili~~~-----~~~kL~Dfg~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~-- 178 (333)
T cd06650 113 IKGLTYLREKHKIMHRDVKPSNILVNSR-----GEIKLCDFGVSGQLIDSMA-------NSFVGTRSYMSPERLQGTH-- 178 (333)
T ss_pred HHHHHHHHhcCCEEecCCChhhEEEcCC-----CCEEEeeCCcchhhhhhcc-------ccCCCCccccCHHHhcCCC--
Confidence 9999999975 79999999999999887 7899999999876533211 1356899999999997654
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc-------------------------------------------
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------------------------------------------- 465 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------------------------------------------- 465 (588)
++.++|||||||++|||++|+.||.........
T Consensus 179 ----~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (333)
T cd06650 179 ----YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFEL 254 (333)
T ss_pred ----CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHH
Confidence 457899999999999999999998642110000
Q ss_pred ----cccccCCCC-CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCCChhHHHHHHHh
Q psy4039 466 ----EVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLT 533 (588)
Q Consensus 466 ----~~~~~~~~~-~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~ 533 (588)
.....+..+ ..++.++++||.+||+.||++|||+++++. |+|++.......+...|+.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~---------h~~~~~~~~~~~~~~~~~~~ 318 (333)
T cd06650 255 LDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV---------HAFIKRSEAEEVDFAGWLCS 318 (333)
T ss_pred HHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh---------CHHHhcCccccccHHHHHHH
Confidence 000001111 135788999999999999999999999998 99999766556667788744
No 84
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-40 Score=353.70 Aligned_cols=254 Identities=23% Similarity=0.264 Sum_probs=197.0
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.+.||+|+||.||+|.+. ++.||||++....... .....+.+|+.+++.+ +||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h~ 83 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ---------------THAKRAYRELVLMKCV----NHK 83 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc---------------hhHHHHHHHHHHHHhc----CCC
Confidence 488999999999999999999986 7899999985321110 0123345688888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.... .......+|+||||++++|.+++.. .+++..+..++.|++.|
T Consensus 84 ~ii~~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~a 138 (364)
T cd07875 84 NIIGLLNVFTPQK----------------------SLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCG 138 (364)
T ss_pred Cccccceeecccc----------------------cccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHH
Confidence 9999999886532 1112235899999999899888853 68899999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++....... .....||+.|+|||++.+..
T Consensus 139 L~~LH~~~ivH~Dlkp~NIll~~~-----~~~kL~DfG~a~~~~~~~~------~~~~~~t~~y~aPE~~~~~~------ 201 (364)
T cd07875 139 IKHLHSAGIIHRDLKPSNIVVKSD-----CTLKILDFGLARTAGTSFM------MTPYVVTRYYRAPEVILGMG------ 201 (364)
T ss_pred HHHHhhCCeecCCCCHHHEEECCC-----CcEEEEeCCCccccCCCCc------ccCCcccCCcCCHHHHhCCC------
Confidence 999999999999999999999987 7999999999976543211 12356899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc------------------------ccc------------------
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV------------------------NAL------------------ 470 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~------------------------~~~------------------ 470 (588)
++.++|||||||++|||++|+.||.+......+.. ...
T Consensus 202 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (364)
T cd07875 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFP 281 (364)
T ss_pred CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccc
Confidence 45789999999999999999999965311000000 000
Q ss_pred --CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 471 --PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 471 --~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.......+.++++||.+||+.||.+|||++++++ |||+.
T Consensus 282 ~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~---------hp~~~ 322 (364)
T cd07875 282 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ---------HPYIN 322 (364)
T ss_pred ccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc---------Ccccc
Confidence 0011123567899999999999999999999999 99996
No 85
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.2e-41 Score=356.45 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=196.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||.||+|.+. ++.||||++.+.... .. .....+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----------~~----~~~~~~~~E~~il~~l----~hp~ 62 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF----------KK----DQLAHVKAERDVLAES----DSPW 62 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH----------Hh----HHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999886 789999998531100 00 0123456788999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++|.+.. .+|+||||+ +|+|.+++.... .+++..+..++.|++.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~a 113 (377)
T cd05629 63 VVSLYYSFQDAQ----------------------------YLYLIMEFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLA 113 (377)
T ss_pred cceEEEEEEcCC----------------------------eeEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999988632 499999999 689999997654 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc-----------ccc-----------------
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM-----------QYS----------------- 404 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~-----------~~~----------------- 404 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++........ ...
T Consensus 114 L~~LH~~givHrDlkp~NIll~~~-----~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (377)
T cd05629 114 IEAVHKLGFIHRDIKPDNILIDRG-----GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTM 188 (377)
T ss_pred HHHHHhCCeeccCCCHHHEEECCC-----CCEEEeecccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999977 79999999999643210000 000
Q ss_pred --------------cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc---
Q psy4039 405 --------------SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--- 467 (588)
Q Consensus 405 --------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--- 467 (588)
......+||+.|+|||++.+.. ++.++|||||||++|||++|..||........+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 262 (377)
T cd05629 189 SSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG------YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIIN 262 (377)
T ss_pred cchhhhhhhhhcccccccccCCCccccCHHHHccCC------CCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 0001246999999999997654 45789999999999999999999976432211111
Q ss_pred -cccCCCC--CCccHHHHHHHHHhhhhCCCCC---CCHHHHHHHHhhhhhcCCccccC
Q psy4039 468 -NALPQLN--TNVPEVMRRLVAKLLENDPSDR---PSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 468 -~~~~~~~--~~~~~~l~~Li~~~L~~dP~~R---ps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.....++ ..++.++++||.+||. +|.+| +++.++++ |||+..
T Consensus 263 ~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~---------hp~~~~ 310 (377)
T cd05629 263 WRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS---------HPFFRG 310 (377)
T ss_pred cCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc---------CCCcCC
Confidence 1111222 2578999999999997 77765 59999988 999974
No 86
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.1e-41 Score=356.75 Aligned_cols=255 Identities=21% Similarity=0.227 Sum_probs=197.1
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|++.+.||+|+||.||+|.+. ++.||||++...... . ......+.+|+.+++.+ +||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-----------~---~~~~~~~~~E~~il~~~----~h~~i 63 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-----------L---RNQVAHVKAERDILAEA----DNEWV 63 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-----------h---HHHHHHHHHHHHHHHhC----CCCcC
Confidence 5889999999999999999986 789999998531100 0 00223466799999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++|.+.. .+|+||||+ +|+|.+++...+ .+++..+..++.||+.||
T Consensus 64 v~~~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al 114 (382)
T cd05625 64 VRLYYSFQDKD----------------------------NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAV 114 (382)
T ss_pred CeEEEEEEeCC----------------------------EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 99999988632 499999999 679999997654 789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc--------------------------------
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM-------------------------------- 401 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~-------------------------------- 401 (588)
.|||++||+||||||+|||++.+ +.+||+|||+|+........
T Consensus 115 ~~lH~~~ivHrDlKp~NILl~~~-----g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (382)
T cd05625 115 ESVHKMGFIHRDIKPDNILIDRD-----GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRL 189 (382)
T ss_pred HHHHhCCeecCCCCHHHEEECCC-----CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999987 89999999998643210000
Q ss_pred ----------ccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----c-
Q psy4039 402 ----------QYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----E- 466 (588)
Q Consensus 402 ----------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~- 466 (588)
.........+||+.|+|||++.+.. ++.++||||+||++|||++|++||......... .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~ 263 (382)
T cd05625 190 KPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG------YTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW 263 (382)
T ss_pred cchhhhhccccccccccccccCcccCCHHHhcCCC------CCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHcc
Confidence 0000012357999999999997654 457899999999999999999999764321111 1
Q ss_pred -ccccCCCCCCccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCccccC
Q psy4039 467 -VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 467 -~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.....+....+++++.++|.+|+ .||.+|++ ++++++ |||++.
T Consensus 264 ~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~---------hp~f~~ 310 (382)
T cd05625 264 QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA---------HPFFKT 310 (382)
T ss_pred CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc---------CCCcCC
Confidence 11111123467899999999987 59999997 888888 999974
No 87
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-40 Score=366.46 Aligned_cols=265 Identities=23% Similarity=0.290 Sum_probs=207.0
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
..++|.+.+.||+|+||+||+|.+. ++.||||++........ ....+.+|+.++..+ +|
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~---------------~~~~~~~Ei~~l~~~----~h 90 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEA---------------DKNRAQAEVCCLLNC----DF 90 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHH---------------HHHHHHHHHHHHhcC----CC
Confidence 3479999999999999999999885 88999999854322110 122345688888776 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFT 347 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ 347 (588)
+||+++++.+....+. .......+++||||+ +|+|.+++..+ ...+++..+..++.
T Consensus 91 ~~iv~~~~~~~~~~~~--------------------~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~ 150 (496)
T PTZ00283 91 FSIVKCHEDFAKKDPR--------------------NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFI 150 (496)
T ss_pred CcEEEeecceeccccc--------------------CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 9999998877643210 001112478999999 68999999764 24689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++......... .....+||+.|+|||++.+..
T Consensus 151 qll~aL~~lH~~~IiHrDLKP~NILl~~~-----~~vkL~DFGls~~~~~~~~~~---~~~~~~Gt~~Y~aPE~~~~~~- 221 (496)
T PTZ00283 151 QVLLAVHHVHSKHMIHRDIKSANILLCSN-----GLVKLGDFGFSKMYAATVSDD---VGRTFCGTPYYVAPEIWRRKP- 221 (496)
T ss_pred HHHHHHHHHHhCCEecCCCCHHHEEEeCC-----CCEEEEecccCeecccccccc---ccccccCCcceeCHHHhCCCC-
Confidence 99999999999999999999999999987 799999999998754422111 112467999999999997654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
++.++|||||||++|||++|+.||.+......+ ......+++..+++++.+++.+||+.||.+||++.++++
T Consensus 222 -----~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 222 -----YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred -----CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 457899999999999999999999764322111 122334567789999999999999999999999999998
Q ss_pred HHhhhhhcCCccccCC
Q psy4039 505 VCQLYLWAPKHWLYGA 520 (588)
Q Consensus 505 ~L~~~~~~~h~w~~~~ 520 (588)
|||++..
T Consensus 297 ---------~p~~~~~ 303 (496)
T PTZ00283 297 ---------MPICKLF 303 (496)
T ss_pred ---------CHHHHHh
Confidence 9987643
No 88
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.8e-41 Score=350.98 Aligned_cols=246 Identities=22% Similarity=0.324 Sum_probs=195.0
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||++.+. +..||||++.+...... .....+.+|+.++..+ +||||+++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~--------------~~~~~~~~e~~~l~~~----~hp~i~~~~~ 62 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--------------DEVAHTLTENRVLQNS----RHPFLTALKY 62 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhC----CCCCCCceEE
Confidence 46999999999999986 78999999953211100 0112345678888876 8999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+++||||+ +|+|..++.... .+++..+..++.||+.||.|||+
T Consensus 63 ~~~~~~----------------------------~~~lv~E~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~ 113 (325)
T cd05594 63 SFQTHD----------------------------RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS 113 (325)
T ss_pred EEEcCC----------------------------EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 887632 499999999 689998887654 79999999999999999999997
Q ss_pred -CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 359 -HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 359 -~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++
T Consensus 114 ~~~ivHrDikp~NIll~~~-----~~~kL~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~ 177 (325)
T cd05594 114 EKNVVYRDLKLENLMLDKD-----GHIKITDFGLCKEGIKDGA-----TMKTFCGTPEYLAPEVLEDND------YGRAV 177 (325)
T ss_pred cCCEEecCCCCCeEEECCC-----CCEEEecCCCCeecCCCCc-----ccccccCCcccCCHHHHccCC------CCCcc
Confidence 799999999999999987 7999999999875322111 112456999999999997654 45789
Q ss_pred chhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLYL 510 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~~ 510 (588)
|||||||++|||++|..||.+........ ......++..+++++.+++.+||+.||++|+ ++.++++
T Consensus 178 DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~------ 251 (325)
T cd05594 178 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ------ 251 (325)
T ss_pred ccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc------
Confidence 99999999999999999997643222111 1222345677899999999999999999997 8999988
Q ss_pred hcCCccccC
Q psy4039 511 WAPKHWLYG 519 (588)
Q Consensus 511 ~~~h~w~~~ 519 (588)
|||+..
T Consensus 252 ---h~~~~~ 257 (325)
T cd05594 252 ---HKFFAG 257 (325)
T ss_pred ---CCCcCC
Confidence 999974
No 89
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-40 Score=349.10 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=193.6
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||+|++........ .....+.+|+.++..+ .+||||+++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~E~~~l~~~---~~hp~iv~~~~ 63 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD--------------EDIDWVQTEKHVFEQA---SNHPFLVGLHS 63 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch--------------hHHHHHHHHHHHHHhc---CCCCcCCceee
Confidence 46999999999999987 68999999964211110 0112345677777665 58999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. ..++||||+ +|+|..++.... .+++..+..++.|++.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~E~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~ 114 (329)
T cd05618 64 CFQTES----------------------------RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE 114 (329)
T ss_pred EEEeCC----------------------------EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 489999999 589998887654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivH~Dikp~Nili~~~-----~~~kL~DfG~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (329)
T cd05618 115 RGIIYRDLKLDNVLLDSE-----GHIKLTDYGMCKEGLRPGD-----TTSTFCGTPNYIAPEILRGED------YGFSVD 178 (329)
T ss_pred CCeeeCCCCHHHEEECCC-----CCEEEeeCCccccccCCCC-----ccccccCCccccCHHHHcCCC------CCCccc
Confidence 999999999999999988 7999999999875322111 112467999999999997664 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccc----c-------cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC------HHH
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARN----T-------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS------AEL 501 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~----~-------~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps------~~e 501 (588)
||||||++|||++|+.||...... . .........++..++.++.+++.+||+.||.+||+ +++
T Consensus 179 iwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~ 258 (329)
T cd05618 179 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFAD 258 (329)
T ss_pred eecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHH
Confidence 999999999999999999531000 0 00112233567788999999999999999999998 578
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||++.
T Consensus 259 i~~---------hp~f~~ 267 (329)
T cd05618 259 IQG---------HPFFRN 267 (329)
T ss_pred Hhc---------CCCCCC
Confidence 777 999964
No 90
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.2e-41 Score=356.25 Aligned_cols=258 Identities=22% Similarity=0.250 Sum_probs=199.7
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. ++.||||.+.... .+. ...+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~-------------~~~~~~~~E~~~l~~l----~h~ni 61 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF--QNL-------------VSCKRVFRELKMLCFF----KHDNV 61 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc--cch-------------HHHHHHHHHHHHHHhC----CCCCc
Confidence 4788999999999999999975 8899999984311 000 0123456789999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.+.. ......+|+||||+.++|.+++.... .+++..+..++.||+.||.
T Consensus 62 v~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~ 117 (372)
T cd07853 62 LSALDILQPPH-----------------------IDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLK 117 (372)
T ss_pred CCHhheecCCC-----------------------ccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHH
Confidence 99999987632 01122489999999989998886653 7999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+|||++.+ +.+||+|||+++........ ......||+.|+|||++.+... ++
T Consensus 118 ~LH~~~ivH~dlkp~Nili~~~-----~~~kL~Dfg~a~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~-----~~ 183 (372)
T cd07853 118 YLHSAGILHRDIKPGNLLVNSN-----CVLKICDFGLARVEEPDESK----HMTQEVVTQYYRAPEILMGSRH-----YT 183 (372)
T ss_pred HHHhCCeeCCCCChHHEEECCC-----CCEEeccccceeecccCccc----cCCCCCcCCCcCCHHHHcCCCC-----CC
Confidence 9999999999999999999987 89999999999865432111 1123468999999999876432 35
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccccc---------------------------cccc-------cCCCCCCccHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---------------------------EVNA-------LPQLNTNVPEV 480 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---------------------------~~~~-------~~~~~~~~~~~ 480 (588)
.++||||+||++|||++|+.||.+....... .... ........+++
T Consensus 184 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
T cd07853 184 SAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHE 263 (372)
T ss_pred cHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHH
Confidence 6899999999999999999999653211000 0000 00123456889
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+.+||.+||+.||.+|||++++++ |||+...
T Consensus 264 ~~~li~~mL~~dP~~R~t~~e~l~---------hp~~~~~ 294 (372)
T cd07853 264 AVHLLCRMLVFDPDKRISAADALA---------HPYLDEG 294 (372)
T ss_pred HHHHHHHhCCCChhhCcCHHHHhc---------CHhhCCC
Confidence 999999999999999999999999 9999854
No 91
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-40 Score=353.99 Aligned_cols=261 Identities=21% Similarity=0.276 Sum_probs=203.2
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM 260 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~ 260 (588)
...|.+..++|++++.||+|+||.||+|++. +..||||++...... .....+.+|+.
T Consensus 30 ~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~E~~ 93 (374)
T cd05106 30 NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT----------------DEREALMSELK 93 (374)
T ss_pred cccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH----------------HHHHHHHHHHH
Confidence 4567788899999999999999999999864 357999998532110 01234567888
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----- 334 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----- 334 (588)
+++.+ .+|||||+++++|.+.. .+++||||+ +|+|.+++..+.
T Consensus 94 il~~l---~~h~nIv~~~~~~~~~~----------------------------~~~lv~ey~~~g~L~~~l~~~~~~~~~ 142 (374)
T cd05106 94 ILSHL---GQHKNIVNLLGACTHGG----------------------------PVLVITEYCCYGDLLNFLRKKAETFLN 142 (374)
T ss_pred HHHhh---ccCCceeeEeeEecCCC----------------------------CeEEeHhhccCCcHHHHHHhhhhhhcc
Confidence 88876 57999999999987632 389999999 689999986431
Q ss_pred ----------------------------------------------------------------CCCCHHHHHHHHHHHH
Q psy4039 335 ----------------------------------------------------------------AQLSMHERVLLFTQLL 350 (588)
Q Consensus 335 ----------------------------------------------------------------~~l~~~~~~~i~~ql~ 350 (588)
..+++.+++.++.||+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 222 (374)
T cd05106 143 FVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVA 222 (374)
T ss_pred ccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHH
Confidence 2478889999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||++||+||||||+|||++++ ..+||+|||+++.......... .....+++.|||||++.+..
T Consensus 223 ~aL~yLH~~giiHrDLkp~Nil~~~~-----~~~kL~DfGla~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~---- 290 (374)
T cd05106 223 QGMDFLASKNCIHRDVAARNVLLTDG-----RVAKICDFGLARDIMNDSNYVV---KGNARLPVKWMAPESIFDCV---- 290 (374)
T ss_pred HHHHHHHHCCEEeccCchheEEEeCC-----CeEEEeeceeeeeccCCcceee---ccCCCCccceeCHHHhcCCC----
Confidence 99999999999999999999999977 7899999999986544221111 11234567899999986554
Q ss_pred CCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
++.++|||||||++|||++ |+.||......... .....+..+..+|+++++++.+||+.||.+|||++++++.
T Consensus 291 --~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 291 --YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred --CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 5678999999999999997 99999764322111 1122333455678999999999999999999999999998
Q ss_pred Hhhh
Q psy4039 506 CQLY 509 (588)
Q Consensus 506 L~~~ 509 (588)
|+..
T Consensus 369 l~~~ 372 (374)
T cd05106 369 IQRQ 372 (374)
T ss_pred HHHH
Confidence 7643
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.8e-41 Score=353.48 Aligned_cols=258 Identities=22% Similarity=0.311 Sum_probs=199.4
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
...+++|+..+.||+|+||.||+|++. ++.||||++.... . .. ....+.+|+.+++.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~-~~------------~~~~~~~E~~~l~~l---- 129 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---E-DT------------VRRQICREIEILRDV---- 129 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---c-HH------------HHHHHHHHHHHHHhC----
Confidence 344578888999999999999999986 7899999985321 0 00 123456799999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+|+||+++++++.+. ..+++||||+ +|+|.+. ...++..+..++.|
T Consensus 130 ~h~~iv~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~q 176 (353)
T PLN00034 130 NHPNVVKCHDMFDHN----------------------------GEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQ 176 (353)
T ss_pred CCCCcceeeeEeccC----------------------------CeEEEEEecCCCCccccc-----ccCCHHHHHHHHHH
Confidence 999999999988753 2489999999 5677542 25678888999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
|+.||.|||++||+||||||+|||++.+ +.+||+|||+++........ .....||+.|+|||++.....
T Consensus 177 i~~aL~~LH~~~ivHrDlkp~NIll~~~-----~~~kL~DfG~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~- 245 (353)
T PLN00034 177 ILSGIAYLHRRHIVHRDIKPSNLLINSA-----KNVKIADFGVSRILAQTMDP-----CNSSVGTIAYMSPERINTDLN- 245 (353)
T ss_pred HHHHHHHHHHCCEeecCCCHHHEEEcCC-----CCEEEcccccceeccccccc-----ccccccCccccCccccccccc-
Confidence 9999999999999999999999999987 79999999999875432211 124579999999998854321
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc------cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT------DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~------~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.....+.++|||||||++|||++|+.||....... .......+..+..++.++++||.+||+.||++|||++++
T Consensus 246 ~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~el 325 (353)
T PLN00034 246 HGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQL 325 (353)
T ss_pred cCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11113357999999999999999999997421111 011122334556789999999999999999999999999
Q ss_pred HHHHhhhhhcCCccccCCCC
Q psy4039 503 ATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~~~~~ 522 (588)
++ |||+....+
T Consensus 326 l~---------hp~~~~~~~ 336 (353)
T PLN00034 326 LQ---------HPFILRAQP 336 (353)
T ss_pred hc---------CcccccCCc
Confidence 99 999986543
No 93
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.7e-40 Score=345.82 Aligned_cols=247 Identities=21% Similarity=0.312 Sum_probs=193.1
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||+||+|.+. ++.||||++........ ........|..++..+ .+||||+++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~--------------~~~~~~~~e~~~l~~~---~~hp~iv~~~~ 63 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD--------------DDVECTMVEKRVLSLA---WEHPFLTHLYC 63 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc--------------chHHHHHHHHHHHHhc---cCCCcCcceEE
Confidence 46999999999999987 67899999953211000 0112234466666554 58999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+++||||+ +|+|.+++.... .+++.++..++.|++.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH~ 114 (316)
T cd05619 64 TFQTKE----------------------------NLFFVMEYLNGGDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLHS 114 (316)
T ss_pred EEEeCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 987632 499999999 689999998653 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivHrdikp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (316)
T cd05619 115 KGIVYRDLKLDNILLDTD-----GHIKIADFGMCKENMLGDA-----KTCTFCGTPDYIAPEILLGQK------YNTSVD 178 (316)
T ss_pred CCeEeCCCCHHHEEECCC-----CCEEEccCCcceECCCCCC-----ceeeecCCccccCHHHHcCCC------CCchhh
Confidence 999999999999999987 7899999999875322111 112457999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH-HHHHHHhhhhhcCCc
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE-LAATVCQLYLWAPKH 515 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~-e~l~~L~~~~~~~h~ 515 (588)
||||||++|||++|..||.......... ....+.++..++.++++++.+||+.||++||++. ++++ ||
T Consensus 179 vwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~---------h~ 249 (316)
T cd05619 179 WWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ---------HP 249 (316)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc---------Cc
Confidence 9999999999999999997643221111 1122345566889999999999999999999996 7777 99
Q ss_pred cccC
Q psy4039 516 WLYG 519 (588)
Q Consensus 516 w~~~ 519 (588)
|++.
T Consensus 250 ~~~~ 253 (316)
T cd05619 250 FFRE 253 (316)
T ss_pred ccCC
Confidence 9874
No 94
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-40 Score=354.00 Aligned_cols=250 Identities=21% Similarity=0.318 Sum_probs=198.9
Q ss_pred cCCeEEeeeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
..+|.+.+.||+|+||.||+|... +..||||.+.. .....+|+.+++.+ +
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~----------------------~~~~~~E~~il~~l----~ 144 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG----------------------GKTPGREIDILKTI----S 144 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc----------------------cccHHHHHHHHHhc----C
Confidence 367999999999999999999865 57899998732 12234699999987 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||||++++++.... .++++||++.++|.+++... ..+++.+++.++.||+
T Consensus 145 h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~-~~l~~~~~~~i~~ql~ 195 (392)
T PHA03207 145 HRAIINLIHAYRWKS----------------------------TVCMVMPKYKCDLFTYVDRS-GPLPLEQAITIQRRLL 195 (392)
T ss_pred CCCccceeeeEeeCC----------------------------EEEEEehhcCCCHHHHHHhc-CCCCHHHHHHHHHHHH
Confidence 999999999887532 48999999999999999544 4899999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++||+||||||+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+..
T Consensus 196 ~aL~~LH~~givHrDlkp~Nill~~~-----~~~~l~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---- 263 (392)
T PHA03207 196 EALAYLHGRGIIHRDVKTENIFLDEP-----ENAVLGDFGAACKLDAHPDT---PQCYGWSGTLETNSPELLALDP---- 263 (392)
T ss_pred HHHHHHHHCCccccCCCHHHEEEcCC-----CCEEEccCccccccCccccc---ccccccccccCccCHhHhcCCC----
Confidence 99999999999999999999999987 78999999999765442211 1112467999999999997654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccc-----------------c---------------ccccccCCC-----
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT-----------------D---------------YEVNALPQL----- 473 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-----------------~---------------~~~~~~~~~----- 473 (588)
++.++|||||||++|||++|+.||.+..... . +.....++.
T Consensus 264 --~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (392)
T PHA03207 264 --YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPV 341 (392)
T ss_pred --CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccch
Confidence 4578999999999999999999997632110 0 000001100
Q ss_pred --CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 474 --NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 474 --~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
...++.+++++|.+||..||++|||+.++++ |||+....+
T Consensus 342 ~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~---------~p~f~~~~~ 383 (392)
T PHA03207 342 IRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS---------LPLFTKEPI 383 (392)
T ss_pred hhccCcchhHHHHHHHHhccChhhCCCHHHHhh---------Cchhhccch
Confidence 1235678999999999999999999999999 999986544
No 95
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.9e-40 Score=339.74 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=201.0
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
.+++|.+.+.||+|+||.||+|.+. +..||+|.+....... ....+.+|+.+++.+ +|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~----------------~~~~~~~E~~~l~~l----~h 63 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG----------------APCTAIREVSLLKDL----KH 63 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC----------------chhHHHHHHHHHHhc----CC
Confidence 4588999999999999999999986 7899999985322111 122345689999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||+++++++.+.. ..++||||+.++|.+++......+++..+..++.|+++
T Consensus 64 ~nI~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~ 115 (301)
T cd07873 64 ANIVTLHDIIHTEK----------------------------SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLR 115 (301)
T ss_pred CCcceEEEEEecCC----------------------------eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 99999999987632 48999999999999999876557999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+++|+||||||+|||++.+ +.++|+|||++......... .....+++.|+|||++.+...
T Consensus 116 aL~~lH~~~i~H~dlkp~Nil~~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~---- 181 (301)
T cd07873 116 GLNYCHRRKVLHRDLKPQNLLINER-----GELKLADFGLARAKSIPTKT-----YSNEVVTLWYRPPDILLGSTD---- 181 (301)
T ss_pred HHHHHHhCCeeCCCCCHHHEEECCC-----CcEEECcCcchhccCCCCCc-----ccccceeecccCcHHHhCCCC----
Confidence 9999999999999999999999987 78999999999764332111 113457899999999865431
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccccccC--------CCCCCccH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEVNALP--------QLNTNVPE 479 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~~~~~--------~~~~~~~~ 479 (588)
++.++|||||||++|||++|++||........ +.....+ .....+++
T Consensus 182 -~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (301)
T cd07873 182 -YSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDS 260 (301)
T ss_pred -CccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCH
Confidence 34679999999999999999999975321000 0000001 11235788
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++++||.+||+.||.+|||++++++ |||++
T Consensus 261 ~~~~li~~ml~~dp~~R~t~~eil~---------h~~f~ 290 (301)
T cd07873 261 DGAELLSKLLQFEGRKRISAEEAMK---------HPYFH 290 (301)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc---------Ccccc
Confidence 9999999999999999999999999 99997
No 96
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-40 Score=350.20 Aligned_cols=254 Identities=21% Similarity=0.244 Sum_probs=197.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||+||+|.+. +..||||++...... ......+.+|+.+++.+ +|||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~h~~ 75 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS---------------LIHARRTYRELRLLKHM----KHEN 75 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh---------------hHHHHHHHHHHHHHHhc----CCCc
Confidence 78999999999999999999886 789999998431100 00122345689999987 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++..... .......|++|++++++|.+++... .+++..+..++.||+.||
T Consensus 76 iv~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL 131 (343)
T cd07878 76 VIGLLDVFTPATS----------------------IENFNEVYLVTNLMGADLNNIVKCQ--KLSDEHVQFLIYQLLRGL 131 (343)
T ss_pred hhhhhhhhccccc----------------------ccccCcEEEEeecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 9999998865321 1112248999999999999888654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++...... ....||+.|+|||++.+... +
T Consensus 132 ~~LH~~~ivHrdikp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~-----~ 193 (343)
T cd07878 132 KYIHSAGIIHRDLKPSNVAVNED-----CELRILDFGLARQADDEM--------TGYVATRWYRAPEIMLNWMH-----Y 193 (343)
T ss_pred HHHHHCCeecccCChhhEEECCC-----CCEEEcCCccceecCCCc--------CCccccccccCchHhcCCcc-----C
Confidence 99999999999999999999987 789999999998654321 14568999999999865321 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc-------------------------ccccC--------CCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-------------------------VNALP--------QLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-------------------------~~~~~--------~~~~~~~~~ 480 (588)
+.++|||||||++|||++|+.||.+........ ....+ ......++.
T Consensus 194 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
T cd07878 194 NQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPL 273 (343)
T ss_pred CchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHH
Confidence 578999999999999999999996521100000 00000 111245677
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+.+|+.+||+.||.+|||++++++ |||+..
T Consensus 274 ~~~li~~mL~~dp~~R~s~~ell~---------hp~~~~ 303 (343)
T cd07878 274 AIDLLEKMLVLDSDKRISASEALA---------HPYFSQ 303 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc---------Ccchhc
Confidence 899999999999999999999999 999984
No 97
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.7e-40 Score=345.96 Aligned_cols=247 Identities=20% Similarity=0.303 Sum_probs=195.5
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||+||+|.+. +..||||++....... ......+.+|+.++..+ .+||||+++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~il~~~---~~h~~i~~~~~ 63 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ--------------DDDVECTMTEKRVLALA---GKHPFLTQLHS 63 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh--------------hhHHHHHHHHHHHHHhc---cCCCCccceee
Confidence 46999999999999987 6799999985321100 00122345677777765 47999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+++||||+ +|+|..++.... .+++.++..++.|++.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~ 114 (318)
T cd05570 64 CFQTKD----------------------------RLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHE 114 (318)
T ss_pred EEEcCC----------------------------EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 987632 499999999 689999887654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
++|+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivH~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~------~~~~~D 178 (318)
T cd05570 115 RGIIYRDLKLDNVLLDSE-----GHIKIADFGMCKEGILGGV-----TTSTFCGTPDYIAPEILSYQP------YGPAVD 178 (318)
T ss_pred CCeEccCCCHHHeEECCC-----CcEEecccCCCeecCcCCC-----cccceecCccccCHHHhcCCC------CCcchh
Confidence 999999999999999987 7899999999875322111 112456999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----HHHHHHHhhhhh
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----ELAATVCQLYLW 511 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~e~l~~L~~~~~ 511 (588)
||||||++|||++|+.||.+........ ......++..+++++.++|.+||+.||.+||++ .++++
T Consensus 179 iwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~------- 251 (318)
T cd05570 179 WWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG------- 251 (318)
T ss_pred hhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc-------
Confidence 9999999999999999997643221111 112234566789999999999999999999999 99888
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|||++.
T Consensus 252 --~~~~~~ 257 (318)
T cd05570 252 --HPFFRE 257 (318)
T ss_pred --CCCcCC
Confidence 999974
No 98
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.6e-40 Score=334.00 Aligned_cols=253 Identities=18% Similarity=0.269 Sum_probs=199.2
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
+..++|++.+.||+|+||.||+|.+. +..||+|++...... .....+.+|+.++..+
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~----------------~~~~~~~~e~~~l~~l-- 63 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD----------------KQRRGFLAEALTLGQF-- 63 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH----------------HHHHHHHHHHHHHhcC--
Confidence 44578999999999999999999864 568999998532110 0123456788888876
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+||||+++++++.... ..++||||+ +|+|.+++......+++.+++.++
T Consensus 64 --~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~ 113 (266)
T cd05064 64 --DHSNIVRLEGVITRGN----------------------------TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGML 113 (266)
T ss_pred --CCCCcCeEEEEEecCC----------------------------CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 8999999999987531 489999999 579999998765589999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||+|||++|++||||||+|||++.+ +.++++|||.+......... ......++..|+|||++.+..
T Consensus 114 ~~i~~al~~lH~~~iiH~dikp~nili~~~-----~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~ 184 (266)
T cd05064 114 PGLASGMKYLSEMGYVHKGLAAHKVLVNSD-----LVCKISGFRRLQEDKSEAIY----TTMSGKSPVLWAAPEAIQYHH 184 (266)
T ss_pred HHHHHHHHHHHHCCEeeccccHhhEEEcCC-----CcEEECCCcccccccccchh----cccCCCCceeecCHHHHhhCC
Confidence 999999999999999999999999999887 78999999987654321111 111234567899999987654
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
++.++|||||||++||+++ |..||.+..... .......++.+..+|..+.+++.+||+.+|++||+++++
T Consensus 185 ------~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i 258 (266)
T cd05064 185 ------FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQI 258 (266)
T ss_pred ------ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 4578999999999999775 999997642211 111222334567889999999999999999999999999
Q ss_pred HHHHhh
Q psy4039 503 ATVCQL 508 (588)
Q Consensus 503 l~~L~~ 508 (588)
++.|..
T Consensus 259 ~~~l~~ 264 (266)
T cd05064 259 HSILSK 264 (266)
T ss_pred HHHHHh
Confidence 987653
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.9e-40 Score=336.62 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=193.1
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|+||+||+|.+. ++.||||.+........ ...+.+..|+.+++.+ +||||+++++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~--------------~~~~~~~~E~~il~~l----~~~~i~~~~~~~ 62 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR--------------KGYEGAMVEKRILAKV----HSRFIVSLAYAF 62 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh--------------HHHHHHHHHHHHHHhC----CCCcEeeeeEEE
Confidence 799999999999986 78999999853211000 0113345688899887 999999999888
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
.+. ..+++||||+ +|+|..++.. ....+++..+..++.||+.||.|||
T Consensus 63 ~~~----------------------------~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 114 (280)
T cd05608 63 QTK----------------------------TDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH 114 (280)
T ss_pred cCC----------------------------CeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 753 2489999999 5899988854 2346999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
+++|+||||||+||+++.+ +.++|+|||++.....+... .....||+.|+|||++.+.. ++.++
T Consensus 115 ~~~i~H~dlkp~Nili~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~------~~~~~ 178 (280)
T cd05608 115 QRRIIYRDLKPENVLLDND-----GNVRISDLGLAVELKDGQSK-----TKGYAGTPGFMAPELLQGEE------YDFSV 178 (280)
T ss_pred HCCcccCCCCHHHEEECCC-----CCEEEeeCccceecCCCCcc-----ccccCCCcCccCHHHhcCCC------CCccc
Confidence 9999999999999999877 78999999999765443211 12356999999999997654 45689
Q ss_pred chhhHHHHHHHHhcCCCCCccccccccc------cccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHH
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVC 506 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L 506 (588)
|||||||++|||++|+.||......... ........+..+++++.+++.+||+.||++|| +++++++
T Consensus 179 DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~-- 256 (280)
T cd05608 179 DYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT-- 256 (280)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc--
Confidence 9999999999999999999753211110 01112234567899999999999999999999 7889888
Q ss_pred hhhhhcCCccccC
Q psy4039 507 QLYLWAPKHWLYG 519 (588)
Q Consensus 507 ~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 -------h~~~~~ 262 (280)
T cd05608 257 -------HPLFRD 262 (280)
T ss_pred -------Chhhhc
Confidence 999975
No 100
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.6e-40 Score=352.66 Aligned_cols=260 Identities=22% Similarity=0.250 Sum_probs=201.4
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM 260 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~ 260 (588)
...+.+..++|++++.||+|+||.||+|++. +..||||++...... ...+.+.+|+.
T Consensus 27 ~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~----------------~~~~~~~~Ei~ 90 (375)
T cd05104 27 DHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL----------------TEREALMSELK 90 (375)
T ss_pred ccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc----------------HHHHHHHHHHH
Confidence 3456677789999999999999999999752 568999998532111 01234567999
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----- 334 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----- 334 (588)
++..+ .+|||||+++++|.+.. ..++||||+ +|+|.+++....
T Consensus 91 il~~l---~~HpnIv~l~~~~~~~~----------------------------~~~lv~E~~~~g~L~~~l~~~~~~~~~ 139 (375)
T cd05104 91 VLSYL---GNHINIVNLLGACTVGG----------------------------PTLVITEYCCYGDLLNFLRRKRDSFIC 139 (375)
T ss_pred HHHHh---cCCcceeeeeeeeccCC----------------------------cceeeehhccCCcHHHHHHhccccccc
Confidence 99876 47999999999987632 389999999 689999986531
Q ss_pred ---------------------------------------------------------------------CCCCHHHHHHH
Q psy4039 335 ---------------------------------------------------------------------AQLSMHERVLL 345 (588)
Q Consensus 335 ---------------------------------------------------------------------~~l~~~~~~~i 345 (588)
..+++..+..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 219 (375)
T cd05104 140 PKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSF 219 (375)
T ss_pred ccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHH
Confidence 14788899999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.||++||.|||+++|+||||||+|||++.+ ..+||+|||+++.......... .....++..|+|||++.+.
T Consensus 220 ~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~-----~~~kl~DfG~a~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~ 291 (375)
T cd05104 220 SYQVAKGMSFLASKNCIHRDLAARNILLTHG-----RITKICDFGLARDIRNDSNYVV---KGNARLPVKWMAPESIFNC 291 (375)
T ss_pred HHHHHHHHHHHHHCCeeccCCchhhEEEECC-----CcEEEecCccceeccCcccccc---cCCCCCCcceeChhHhcCC
Confidence 9999999999999999999999999999877 7899999999986544221111 1123456789999999765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc----cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 500 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~ 500 (588)
. ++.++|||||||++|||++ |..||....... .......+..+...|.++++|+.+||+.||++|||+.
T Consensus 292 ~------~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 365 (375)
T cd05104 292 V------YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFK 365 (375)
T ss_pred C------CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHH
Confidence 4 4578999999999999997 889986532211 1111222334556788999999999999999999999
Q ss_pred HHHHHHhh
Q psy4039 501 LAATVCQL 508 (588)
Q Consensus 501 e~l~~L~~ 508 (588)
++++.|+.
T Consensus 366 eil~~l~~ 373 (375)
T cd05104 366 QIVQLIEQ 373 (375)
T ss_pred HHHHHHHh
Confidence 99997764
No 101
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4e-40 Score=362.01 Aligned_cols=252 Identities=21% Similarity=0.292 Sum_probs=201.3
Q ss_pred cCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
...|.+.+.||+|+||.||+|... +..||+|.+...+ .. ....+.+|+.+++.+ +|
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~----~~-------------~~~~~~~E~~~l~~l----~H 124 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND----ER-------------QAAYARSELHCLAAC----DH 124 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC----HH-------------HHHHHHHHHHHHHhC----CC
Confidence 355999999999999999999875 5678999763211 00 112345688999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFT 347 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ 347 (588)
||||+++++|.+.. .+|+||||+ +|+|.+++... ...+++.++..++.
T Consensus 125 pniv~~~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~ 176 (478)
T PTZ00267 125 FGIVKHFDDFKSDD----------------------------KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFY 176 (478)
T ss_pred CCEeEEEEEEEECC----------------------------EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 99999999987632 599999999 68999988753 33689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++......... .....+||+.|+|||++.+..
T Consensus 177 qi~~aL~~lH~~~ivHrDlkp~NIll~~~-----~~~kL~DFgla~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~- 247 (478)
T PTZ00267 177 QIVLALDEVHSRKMMHRDLKSANIFLMPT-----GIIKLGDFGFSKQYSDSVSLD---VASSFCGTPYYLAPELWERKR- 247 (478)
T ss_pred HHHHHHHHHHhCCEEECCcCHHhEEECCC-----CcEEEEeCcCceecCCccccc---cccccCCCccccCHhHhCCCC-
Confidence 99999999999999999999999999987 789999999998765432211 112467999999999997654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
++.++|||||||++|||++|+.||......... .....++.+..++.+++++|.+||+.||++||++++++.
T Consensus 248 -----~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 248 -----YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 457899999999999999999999764322111 112233456678999999999999999999999999988
Q ss_pred HHhhhhhcCCcccc
Q psy4039 505 VCQLYLWAPKHWLY 518 (588)
Q Consensus 505 ~L~~~~~~~h~w~~ 518 (588)
|+|++
T Consensus 323 ---------~~~~~ 327 (478)
T PTZ00267 323 ---------TEFLK 327 (478)
T ss_pred ---------CHHHH
Confidence 77765
No 102
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-40 Score=350.92 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=197.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||++....... ......+.+|+.++..+ +|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~l----~~~~ 62 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE--------------KEQVAHIRAERDILVEA----DGAW 62 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh--------------hhhHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 7899999985311100 00123456688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .+|+||||+ +|+|.+++...+ .+++..+..++.|++.|
T Consensus 63 iv~~~~~~~~~~----------------------------~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~ 113 (360)
T cd05627 63 VVKMFYSFQDKR----------------------------NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLA 113 (360)
T ss_pred EeeEEEEEEcCC----------------------------EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999997654 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc------------------------------
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ------------------------------ 402 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~------------------------------ 402 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++.........
T Consensus 114 L~~lH~~givHrDLkp~NIli~~~-----~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (360)
T cd05627 114 IDAIHQLGFIHRDIKPDNLLLDAK-----GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKN 188 (360)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC-----CCEEEeeccCCcccccccccccccccccCCccccccccccccccccccccc
Confidence 999999999999999999999887 899999999987543211000
Q ss_pred cccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccCCCC--CC
Q psy4039 403 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALPQLN--TN 476 (588)
Q Consensus 403 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~~~~--~~ 476 (588)
........+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+......+.. .....++ ..
T Consensus 189 ~~~~~~~~~gt~~Y~APE~~~~~~------~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~ 262 (360)
T cd05627 189 RRQLAYSTVGTPDYIAPEVFMQTG------YNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVP 262 (360)
T ss_pred ccccccccCCCccccCHHHHcCCC------CCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCC
Confidence 000012357999999999997665 45789999999999999999999976433221111 0111122 24
Q ss_pred ccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCccccC
Q psy4039 477 VPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 477 ~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+++++++||.+|+. ||.+|++ ++++++ |||++.
T Consensus 263 ~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~---------hp~f~~ 298 (360)
T cd05627 263 ISEKAKDLILRFCT-DSENRIGSNGVEEIKS---------HPFFEG 298 (360)
T ss_pred CCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc---------CCCCCC
Confidence 78899999999874 9999985 678777 999974
No 103
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.3e-40 Score=351.40 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=201.9
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
..+..++|++.+.||+|+||.||+|.+. ++.||+|++...... . ......+.+|+.+++.+
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-----------~---~~~~~~~~~e~~i~~~~--- 100 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-----------K---RSDSAFFWEERDIMAFA--- 100 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-----------h---hHHHHHHHHHHHHHHhC---
Confidence 4555689999999999999999999997 789999998531110 0 00123456788888876
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+. ..+|+||||+ +|+|.+++... .+++..+..++.
T Consensus 101 -~hp~iv~~~~~~~~~----------------------------~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~ 149 (371)
T cd05622 101 -NSPWVVQLFYAFQDD----------------------------RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTA 149 (371)
T ss_pred -CCCCCCeEEEEEEcC----------------------------CEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHH
Confidence 999999999998763 2499999999 68999999765 789999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
||+.||.|||++||+||||||+|||++.+ +.+||+|||+|+........ .....+||+.|||||++.+...
T Consensus 150 qi~~aL~~LH~~~ivHrDLkp~NIll~~~-----~~ikL~DfG~a~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~ 220 (371)
T cd05622 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKS-----GHLKLADFGTCMKMNKEGMV----RCDTAVGTPDYISPEVLKSQGG 220 (371)
T ss_pred HHHHHHHHHHHCCEEeCCCCHHHEEECCC-----CCEEEEeCCceeEcCcCCcc----cccCcccCccccCHHHHhccCC
Confidence 99999999999999999999999999987 89999999999875432111 1124679999999999976532
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccC--CCCCCccHHHHHHHHHhhhhCCCC--CCCH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALP--QLNTNVPEVMRRLVAKLLENDPSD--RPSA 499 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~--~~~~~~~~~l~~Li~~~L~~dP~~--Rps~ 499 (588)
. ..++.++|||||||++|||++|..||........+.. .... +.+..++.+++++|..||..++.+ |+++
T Consensus 221 ~--~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~ 298 (371)
T cd05622 221 D--GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGV 298 (371)
T ss_pred C--ccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCH
Confidence 1 1145789999999999999999999986432211111 1111 123468999999999999843332 7899
Q ss_pred HHHHHHHhhhhhcCCccccCC
Q psy4039 500 ELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+++++ |+|++..
T Consensus 299 ~ei~~---------h~~~~~~ 310 (371)
T cd05622 299 EEIKR---------HLFFKND 310 (371)
T ss_pred HHHhc---------CcccCCC
Confidence 99888 9998753
No 104
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5e-40 Score=336.69 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=200.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||++.+. ++.||||++....... ......+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~~~~E~~~l~~l----~h~~i 62 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK--------------RKGEAMALNEKQILEKV----NSRFV 62 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh--------------hhhHHHHHHHHHHHHhc----CCCCE
Confidence 4788999999999999999986 7899999985311110 00223456799999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. .+++||||+ +|+|.+++... ...+++..+..++.|++.|
T Consensus 63 v~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 63 VSLAYAYETKD----------------------------ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred eeeeeeecCCC----------------------------eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 99999887532 499999999 58999888754 2369999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++++ +.++|+|||++.....+... ....||+.|+|||++.+..
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~-----~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~------ 177 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY-----GHIRISDLGLAVEIPEGETI------RGRVGTVGYMAPEVVKNER------ 177 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC-----CCEEEeeCCCceecCCCCcc------ccccCCCCccCcHHhcCCC------
Confidence 999999999999999999999987 78999999999775432211 1346899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc------cccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAEL 501 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e 501 (588)
++.++||||+||++|||++|..||.+....... ........+..+++.+.+|+.+||+.||.+|| ++++
T Consensus 178 ~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~ 257 (285)
T cd05605 178 YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEE 257 (285)
T ss_pred CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHH
Confidence 457899999999999999999999764221110 11222344567899999999999999999999 8999
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||+..
T Consensus 258 l~~---------~~~~~~ 266 (285)
T cd05605 258 VKA---------HPFFRT 266 (285)
T ss_pred Hhc---------CcCccC
Confidence 888 999964
No 105
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.8e-40 Score=344.95 Aligned_cols=246 Identities=25% Similarity=0.363 Sum_probs=190.1
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH-HHhhhcCCCCCCceEEEe
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM-LMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~-il~~l~~l~~HpNIV~l~ 278 (588)
+.||+|+||+||+|.+. ++.||||++........ .....+..|.. +++.+ +||||++++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------~~~~~~~~e~~~~~~~l----~hp~iv~~~ 62 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK--------------KEQKHIMAERNVLLKNV----KHPFLVGLH 62 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh--------------hHHHHHHHHHHHHHhhC----CCCCCCCee
Confidence 46999999999999996 78999999853211000 01112233443 44444 899999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++.+.. ..++||||+ +|+|..++.... .+++..+..++.||+.||.|||
T Consensus 63 ~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH 113 (323)
T cd05575 63 YSFQTAD----------------------------KLYFVLDYVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLH 113 (323)
T ss_pred EEEEeCC----------------------------EEEEEEcCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9887632 489999999 579999987654 7999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++||+||||||+|||++.+ +.+||+|||+++...... ......+||+.|+|||++.+.. ++.++
T Consensus 114 ~~givH~dikp~NIll~~~-----~~~kl~Dfg~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~------~~~~~ 177 (323)
T cd05575 114 SLNIIYRDLKPENILLDSQ-----GHVVLTDFGLCKEGIEHS-----KTTSTFCGTPEYLAPEVLRKQP------YDRTV 177 (323)
T ss_pred HCCeEeCCCCHHHeEECCC-----CcEEEeccCCCcccccCC-----CccccccCChhhcChhhhcCCC------CCccc
Confidence 9999999999999999987 799999999987532211 1112457999999999997654 45789
Q ss_pred chhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH----HHHHHHHhhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA----ELAATVCQLYLW 511 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~----~e~l~~L~~~~~ 511 (588)
|||||||++|||++|..||........+. ......++..+++++.++|.+||+.||.+||++ .++++
T Consensus 178 DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~------- 250 (323)
T cd05575 178 DWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKN------- 250 (323)
T ss_pred cccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHc-------
Confidence 99999999999999999997643222111 112234556789999999999999999999997 46666
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|||+..
T Consensus 251 --~~~~~~ 256 (323)
T cd05575 251 --HVFFSS 256 (323)
T ss_pred --CCCcCC
Confidence 999864
No 106
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.1e-40 Score=343.89 Aligned_cols=252 Identities=19% Similarity=0.268 Sum_probs=196.8
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. ++.||||++....... ....+.+..|+.++..+ ..|++|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~~---~~~~~i 63 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ--------------DDDVECTMVEKRVLALQ---DKPPFL 63 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh--------------hhHHHHHHHHHHHHHhc---cCCCch
Confidence 4788899999999999999986 7899999985311100 00122344577777665 457888
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. .+|+||||+ +|+|.+++.... .+++.++..++.|++.||
T Consensus 64 ~~~~~~~~~~~----------------------------~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al 114 (323)
T cd05615 64 TQLHSCFQTVD----------------------------RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGL 114 (323)
T ss_pred hheeeEEecCC----------------------------EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 89998887632 499999999 689999997654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. +
T Consensus 115 ~~lH~~~ivHrDikp~Nill~~~-----~~ikL~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~ 178 (323)
T cd05615 115 FFLHRRGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKEHMVDGV-----TTRTFCGTPDYIAPEIIAYQP------Y 178 (323)
T ss_pred HHHHHCCeeccCCCHHHeEECCC-----CCEEEeccccccccCCCCc-----cccCccCCccccCHHHHcCCC------C
Confidence 99999999999999999999987 7899999999875432111 112456999999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----HHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----ELAATVC 506 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~e~l~~L 506 (588)
+.++||||+||++|||++|+.||.+........ .......+..++.++.+++.+||+.||.+|++. +++.+
T Consensus 179 ~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~-- 256 (323)
T cd05615 179 GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIRE-- 256 (323)
T ss_pred CCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhc--
Confidence 578999999999999999999997643222111 112234566789999999999999999999984 56665
Q ss_pred hhhhhcCCccccC
Q psy4039 507 QLYLWAPKHWLYG 519 (588)
Q Consensus 507 ~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 -------h~~f~~ 262 (323)
T cd05615 257 -------HAFFRR 262 (323)
T ss_pred -------CcccCC
Confidence 999874
No 107
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.6e-40 Score=338.12 Aligned_cols=252 Identities=19% Similarity=0.195 Sum_probs=194.1
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC------------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchh
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR------------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLR 255 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~------------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~ 255 (588)
..++|.+.+.||+|+||.||+|.+. +..||||.+..... . .....+
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~---~-------------~~~~~~ 66 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN---K-------------NARNDF 66 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC---H-------------HHHHHH
Confidence 4478999999999999999999863 34799999853211 0 012346
Q ss_pred hhHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc
Q psy4039 256 LNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC 334 (588)
Q Consensus 256 ~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~ 334 (588)
.+|+.++..+ +||||+++++++.+.. ..+++|||+ +|+|.+++....
T Consensus 67 ~~E~~~l~~l----~h~niv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~ 114 (304)
T cd05096 67 LKEVKILSRL----KDPNIIRLLGVCVDED----------------------------PLCMITEYMENGDLNQFLSSHH 114 (304)
T ss_pred HHHHHHHhhc----CCCCeeEEEEEEecCC----------------------------ceEEEEecCCCCcHHHHHHhcc
Confidence 6789999887 9999999999987632 389999999 689999996531
Q ss_pred ------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 335 ------------------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 335 ------------------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
..+++..+..++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~DfG~~~~~~ 189 (304)
T cd05096 115 LDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN-----LTIKIADFGMSRNLY 189 (304)
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC-----ccEEECCCccceecc
Confidence 246888999999999999999999999999999999999987 789999999998654
Q ss_pred CCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc--CCCCCccccccccc---------
Q psy4039 397 SGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG--HDNPFYQSARNTDY--------- 465 (588)
Q Consensus 397 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt--G~~Pf~~~~~~~~~--------- 465 (588)
.+.... ......++..|||||++.+.. ++.++|||||||++|||++ +..||.........
T Consensus 190 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~ 260 (304)
T cd05096 190 AGDYYR---IQGRAVLPIRWMAWECILMGK------FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRD 260 (304)
T ss_pred cCceeE---ecCcCCCCccccCHHHHhcCC------CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhh
Confidence 322111 112345688999999987654 4578999999999999986 56787653211110
Q ss_pred -cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 466 -EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 466 -~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
........+..+|..+.+++.+||+.||++|||++++.+.|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 261 QGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred ccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 011112234578899999999999999999999999987654
No 108
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.8e-40 Score=342.91 Aligned_cols=259 Identities=23% Similarity=0.339 Sum_probs=198.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. ++.||||++.+.... + ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----------~---~~~~~~~~~e~~~l~~~----~~~~ 62 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-----------K---RAETACFREERDVLVNG----DRRW 62 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-----------h---hhhHHHHHHHHHHHHhC----CCCC
Confidence 57999999999999999999987 789999998531100 0 01223456688888776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|++++++|.+.. .+|+||||+ +|+|.+++......+++..+..++.||+.|
T Consensus 63 i~~~~~~~~~~~----------------------------~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 114 (331)
T cd05597 63 ITNLHYAFQDEN----------------------------NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLA 114 (331)
T ss_pred CCceEEEEecCC----------------------------eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999998755589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++.+ +.+||+|||++.......... ....+||+.|||||++...... ...
T Consensus 115 l~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~Dfg~~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~-~~~ 184 (331)
T cd05597 115 IDSVHQLGYVHRDIKPDNVLLDKN-----GHIRLADFGSCLRLLADGTVQ----SNVAVGTPDYISPEILQAMEDG-KGR 184 (331)
T ss_pred HHHHHhCCeEECCCCHHHEEECCC-----CCEEEEECCceeecCCCCCcc----ccceeccccccCHHHHhhcccc-ccC
Confidence 999999999999999999999887 789999999987654322111 1134699999999999743211 011
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc-------ccccCCCCCCccHHHHHHHHHhhhhCCC--CCCCHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-------VNALPQLNTNVPEVMRRLVAKLLENDPS--DRPSAELAA 503 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~~l~~Li~~~L~~dP~--~Rps~~e~l 503 (588)
++.++|||||||++|||++|+.||.+......+. ....+.....+++++++++++||..+++ .|+++++++
T Consensus 185 ~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l 264 (331)
T cd05597 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFK 264 (331)
T ss_pred CCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 4568999999999999999999997642211110 1112223345799999999998865443 378999999
Q ss_pred HHHhhhhhcCCccccC
Q psy4039 504 TVCQLYLWAPKHWLYG 519 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~~ 519 (588)
+ |||+..
T Consensus 265 ~---------hp~~~~ 271 (331)
T cd05597 265 D---------HPFFEG 271 (331)
T ss_pred c---------CCCCCC
Confidence 9 999964
No 109
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-40 Score=348.15 Aligned_cols=243 Identities=28% Similarity=0.396 Sum_probs=192.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|++.+.||+|+||.||+|.+. +..||+|+... .....|+.+++.+ +|||
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----------------------~~~~~E~~~l~~l----~h~~ 118 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----------------------GTTLIEAMLLQNV----NHPS 118 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----------------------cccHHHHHHHHhC----CCCC
Confidence 57999999999999999999997 56899997521 1223588888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+.. ..++|||++.++|.+++......+++.++..|+.||+.||
T Consensus 119 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 119 VIRMKDTLVSGA----------------------------ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGL 170 (357)
T ss_pred CcChhheEEeCC----------------------------eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 999999987632 4899999999999999987666899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++...... ......||+.|+|||++.+.. +
T Consensus 171 ~~LH~~~ivHrDlkp~Nill~~~-----~~~kl~DfG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~~~------~ 233 (357)
T PHA03209 171 RYLHAQRIIHRDVKTENIFINDV-----DQVCIGDLGAAQFPVVAP------AFLGLAGTVETNAPEVLARDK------Y 233 (357)
T ss_pred HHHHHCCeecCCCCHHHEEECCC-----CCEEEecCccccccccCc------ccccccccccccCCeecCCCC------C
Confidence 99999999999999999999987 789999999997532211 112456999999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc-------------------cccccccC--------------------C--
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT-------------------DYEVNALP--------------------Q-- 472 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-------------------~~~~~~~~--------------------~-- 472 (588)
+.++|||||||++|||+++..|+....... .......+ +
T Consensus 234 ~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (357)
T PHA03209 234 NSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYT 313 (357)
T ss_pred CchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCccc
Confidence 578999999999999998655543210000 00000000 0
Q ss_pred -----CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 473 -----LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 473 -----~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
....++.++.+||.+||+.||.+|||+.|+++ ||||+.
T Consensus 314 ~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~---------hp~f~~ 356 (357)
T PHA03209 314 RYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN---------YPMFAQ 356 (357)
T ss_pred ccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc---------Cchhcc
Confidence 01245677888999999999999999999999 999863
No 110
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-40 Score=344.66 Aligned_cols=245 Identities=23% Similarity=0.343 Sum_probs=194.2
Q ss_pred eeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|+||.||++... ++.||||++...... ........+|+.+++.+ +||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~h~niv~ 62 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK---------------VRDRVRTKMERDILAEV----NHPFIVK 62 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh---------------hhhHHHHHHHHHHHHhC----CCCCccc
Confidence 57999999999998763 789999998531110 00122345688899887 9999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
+++++.+. ..+|+||||+ +|+|.+++.... .+++..+..++.||++||.|
T Consensus 63 ~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~ 113 (318)
T cd05582 63 LHYAFQTE----------------------------GKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDH 113 (318)
T ss_pred EEEEEEcC----------------------------CEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHH
Confidence 99998763 1489999999 689999997654 79999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+++|+||||||+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+.. ++.
T Consensus 114 lH~~~i~H~dlkp~Nil~~~~-----~~~kL~Dfg~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~------~~~ 177 (318)
T cd05582 114 LHSLGIIYRDLKPENILLDEE-----GHIKLTDFGLSKESIDHEK-----KAYSFCGTVEYMAPEVVNRRG------HTQ 177 (318)
T ss_pred HHHCCEecCCCCHHHeEECCC-----CcEEEeeccCCcccCCCCC-----ceecccCChhhcCHHHHcCCC------CCC
Confidence 999999999999999999987 7899999999876533211 112467999999999997654 457
Q ss_pred cCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHHHHHHHhh
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AELAATVCQL 508 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e~l~~L~~ 508 (588)
++|||||||++|||++|+.||.......... ......++..+++++.+++.+||+.||++||+ +++++.
T Consensus 178 ~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~---- 253 (318)
T cd05582 178 SADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKR---- 253 (318)
T ss_pred ccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhC----
Confidence 8999999999999999999997643221111 11223456678999999999999999999999 455555
Q ss_pred hhhcCCccccC
Q psy4039 509 YLWAPKHWLYG 519 (588)
Q Consensus 509 ~~~~~h~w~~~ 519 (588)
|||+..
T Consensus 254 -----~~~~~~ 259 (318)
T cd05582 254 -----HPFFST 259 (318)
T ss_pred -----CCCcCC
Confidence 999864
No 111
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9e-40 Score=355.94 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=195.4
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
..+|.+.+.||+|+||.||+|.+. ++.||||... ...+.+|+.+++.+ +||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----------------------~~~~~~E~~iL~~L----~Hp 220 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----------------------YASSVHEARLLRRL----SHP 220 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----------------------ccCHHHHHHHHHHC----CCC
Confidence 468999999999999999999997 6789999641 12235699999987 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|||++++++.... ..+++||++.++|.+++......+++.++..|+.||+.|
T Consensus 221 nIv~l~~~~~~~~----------------------------~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~a 272 (461)
T PHA03211 221 AVLALLDVRVVGG----------------------------LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSA 272 (461)
T ss_pred CCCcEEEEEEECC----------------------------EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 9999999887631 489999999999999998765579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++......... ......||+.|||||++.+..
T Consensus 273 L~yLH~~gIvHrDLKP~NILl~~~-----~~vkL~DFGla~~~~~~~~~~---~~~~~~GT~~Y~APE~~~~~~------ 338 (461)
T PHA03211 273 IDYIHGEGIIHRDIKTENVLVNGP-----EDICLGDFGAACFARGSWSTP---FHYGIAGTVDTNAPEVLAGDP------ 338 (461)
T ss_pred HHHHHHCCEEECcCCHHHEEECCC-----CCEEEcccCCceecccccccc---cccccCCCcCCcCHHHHcCCC------
Confidence 999999999999999999999987 789999999998754322111 112457999999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccc----------------ccccccccC---------------------CC--
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARN----------------TDYEVNALP---------------------QL-- 473 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~----------------~~~~~~~~~---------------------~~-- 473 (588)
++.++|||||||++|||++|..|+...... ........+ ..
T Consensus 339 ~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 418 (461)
T PHA03211 339 YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTR 418 (461)
T ss_pred CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCC
Confidence 457899999999999999987665431100 000000000 00
Q ss_pred --C---CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 474 --N---TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 474 --~---~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+ ..++.++.+||.+||+.||.+|||+.|+++ ||||+.
T Consensus 419 ~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~---------hp~f~~ 460 (461)
T PHA03211 419 PAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR---------LPLFQS 460 (461)
T ss_pred cchhhhccccchHHHHHHHHcccChhhCcCHHHHhh---------CcccCC
Confidence 0 134568999999999999999999999999 999963
No 112
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.9e-40 Score=360.49 Aligned_cols=260 Identities=19% Similarity=0.227 Sum_probs=193.8
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC--CC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN--LP 269 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~--l~ 269 (588)
..++|++.+.||+|+||+||+|.+. ++.||||++++... .......|+.+++.+.. ..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~------------------~~~~~~~e~~~l~~l~~~~~~ 188 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK------------------YTRDAKIEIQFMEKVRQADPA 188 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh------------------hHHHHHHHHHHHHHHhhcCcc
Confidence 3478999999999999999999986 78899999853110 11123346666666532 12
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
.|++|++++++|... ...+++|||+++++|.+++...+ .+++..+..|+.||
T Consensus 189 ~~~~i~~i~~~~~~~---------------------------~~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi 240 (467)
T PTZ00284 189 DRFPLMKIQRYFQNE---------------------------TGHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQT 240 (467)
T ss_pred cCcceeeeEEEEEcC---------------------------CceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHH
Confidence 567799999888652 12489999999999999997764 79999999999999
Q ss_pred HHHHHHHHh-CCceeccCCCCcEEEcCCCCC-----------CCCceeeeccccccccCCCCccccccccccccCCcccc
Q psy4039 350 LEGVTHLNM-HRTAHRDLKSDNILLDCSEDN-----------TCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM 417 (588)
Q Consensus 350 ~~gL~yLH~-~~IvHrDLKp~NILld~~~~~-----------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~ 417 (588)
+.||.|||+ .|||||||||+|||++.+... ....+||+|||.+...... ....+||+.||
T Consensus 241 ~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~--------~~~~~gt~~Y~ 312 (467)
T PTZ00284 241 GVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS--------RTAIVSTRHYR 312 (467)
T ss_pred HHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccc--------cccccCCcccc
Confidence 999999998 599999999999999865310 1135999999988543221 12467999999
Q ss_pred chhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------------c--c
Q psy4039 418 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------------V--N 468 (588)
Q Consensus 418 APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------------~--~ 468 (588)
|||++.+.. ++.++|||||||++|||++|+.||.+........ . .
T Consensus 313 APE~~~~~~------~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 313 SPEVVLGLG------WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CcHHhhcCC------CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999998765 4578999999999999999999996532110000 0 0
Q ss_pred ccCCC--------------C-CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 469 ALPQL--------------N-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 469 ~~~~~--------------~-~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
..+.. . ....+.+.+||.+||+.||.+|||++|+++ ||||....+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~---------Hp~~~~~~~ 446 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT---------HPYVLKYYP 446 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc---------CccccccCC
Confidence 00000 0 011355789999999999999999999999 999985544
No 113
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-39 Score=337.54 Aligned_cols=251 Identities=24% Similarity=0.295 Sum_probs=188.5
Q ss_pred eeeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 201 GKFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.+||+|+||.||+|+.. +..||+|.+.... ....+.+|+.+++.+ +||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------------------~~~~~~~E~~~l~~l----~h~niv~ 62 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------------------ISMSACREIALLREL----KHPNVIA 62 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------------------CcHHHHHHHHHHHhC----CCCCeee
Confidence 468999999999999975 4789999984311 112345689999987 9999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh--------cCCCCHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER--------CAQLSMHERVLLFTQ 348 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~--------~~~l~~~~~~~i~~q 348 (588)
+++++.... ...++++|||++++|.+++... ...+++..+..++.|
T Consensus 63 ~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 116 (317)
T cd07867 63 LQKVFLSHS--------------------------DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQ 116 (317)
T ss_pred EEEEEeccC--------------------------CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHH
Confidence 999986521 2248999999998999888632 125889999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
|+.||.|||+++|+||||||+|||++.+.... +.+||+|||+|+........ ........||+.|+|||++.+...
T Consensus 117 i~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~-~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~- 192 (317)
T cd07867 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPER-GRVKIADMGFARLFNSPLKP--LADLDPVVVTFWYRAPELLLGARH- 192 (317)
T ss_pred HHHHHHHHHhCCEEcCCCCHHHEEEccCCCCC-CcEEEeeccceeccCCCccc--ccccCcceecccccCcHHhcCCCc-
Confidence 99999999999999999999999996442222 78999999999876543211 111124578999999999875431
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccc----c------------
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEV----N------------ 468 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~----~------------ 468 (588)
++.++|||||||++|||++|.+||........ +.. .
T Consensus 193 ----~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (317)
T cd07867 193 ----YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRT 268 (317)
T ss_pred ----cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhccc
Confidence 45679999999999999999999964211000 000 0
Q ss_pred ---------ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 469 ---------ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 469 ---------~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.........+..+.+|+.+||+.||.+|||++|+++ |||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~---------hp~f 317 (317)
T cd07867 269 TYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ---------DPYF 317 (317)
T ss_pred ccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc---------CCCC
Confidence 000001123456889999999999999999999999 9996
No 114
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1e-39 Score=342.17 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=198.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.++ ++.||+|++.+... .. ......+.+|+.++..+ +|||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------~~---~~~~~~~~~e~~~l~~~----~~~~ 62 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-----------LK---RAETACFREERDVLVNG----DNQW 62 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH-----------HH---hhHHHHHHHHHHHHhhC----CCCC
Confidence 47899999999999999999987 67899999842110 00 01123456688888776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .+|+||||+ +|+|.+++......+++..+..++.||+.|
T Consensus 63 i~~~~~~~~~~~----------------------------~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~a 114 (332)
T cd05623 63 ITTLHYAFQDEN----------------------------NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIA 114 (332)
T ss_pred EeeEEEEEecCC----------------------------EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999998755589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++.+ +.+||+|||+++......... ....+||+.|||||++.+.... ...
T Consensus 115 l~~lH~~~iiHrDlkp~Nili~~~-----~~~kL~DfG~a~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~-~~~ 184 (332)
T cd05623 115 IDSVHQLHYVHRDIKPDNILMDMN-----GHIRLADFGSCLKLMEDGTVQ----SSVAVGTPDYISPEILQAMEDG-KGK 184 (332)
T ss_pred HHHHHHCCeEecCCCHHHEEECCC-----CCEEEeecchheecccCCcce----ecccccCccccCHHHHhccccC-CCC
Confidence 999999999999999999999977 789999999997653321111 1135799999999998642110 011
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc-------ccccCCCCCCccHHHHHHHHHhhhhCCC--CCCCHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-------VNALPQLNTNVPEVMRRLVAKLLENDPS--DRPSAELAA 503 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~~l~~Li~~~L~~dP~--~Rps~~e~l 503 (588)
++.++|||||||++|||++|+.||........+. ....+.....+++++++|+.+||..++. .|+++++++
T Consensus 185 ~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~ 264 (332)
T cd05623 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFK 264 (332)
T ss_pred CCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHh
Confidence 4578999999999999999999997642211111 1112333356799999999999965444 368999999
Q ss_pred HHHhhhhhcCCccccC
Q psy4039 504 TVCQLYLWAPKHWLYG 519 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~~ 519 (588)
+ |||+..
T Consensus 265 ~---------h~~f~~ 271 (332)
T cd05623 265 Q---------HPFFTG 271 (332)
T ss_pred C---------CCCcCC
Confidence 8 999974
No 115
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=6.4e-40 Score=343.00 Aligned_cols=247 Identities=19% Similarity=0.281 Sum_probs=193.9
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|.+. ++.||||++........ .....+.+|+.++..+ ..||||+++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~~~~~---~~~~~i~~~~~ 63 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDD--------------EDIDWVQTEKHVFEQA---SSNPFLVGLHS 63 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHhh---cCCCCEeeEEE
Confidence 46999999999999986 68999999953211100 0123355678887776 57999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. .+|+||||+ +|+|..++.... .+++..+..++.||+.||.|||+
T Consensus 64 ~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~ 114 (327)
T cd05617 64 CFQTTS----------------------------RLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHE 114 (327)
T ss_pred EEEeCC----------------------------EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987632 499999999 689999887654 79999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
+||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++|
T Consensus 115 ~~ivHrDlkp~Nili~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~D 178 (327)
T cd05617 115 RGIIYRDLKLDNVLLDAD-----GHIKLTDYGMCKEGLGPGD-----TTSTFCGTPNYIAPEILRGEE------YGFSVD 178 (327)
T ss_pred CCeeccCCCHHHEEEeCC-----CCEEEeccccceeccCCCC-----ceecccCCcccCCHHHHCCCC------CCchhe
Confidence 999999999999999987 7899999999875322111 112467999999999997654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccc---------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC------HHHHH
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTD---------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS------AELAA 503 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~---------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps------~~e~l 503 (588)
||||||++|||++|..||........ ........++..++..+.+++.+||+.||.+|++ +++++
T Consensus 179 iwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 258 (327)
T cd05617 179 WWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIK 258 (327)
T ss_pred eehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHH
Confidence 99999999999999999964211110 0112223466778999999999999999999998 46877
Q ss_pred HHHhhhhhcCCccccC
Q psy4039 504 TVCQLYLWAPKHWLYG 519 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~~ 519 (588)
+ |||+..
T Consensus 259 ~---------h~~f~~ 265 (327)
T cd05617 259 S---------HTFFRS 265 (327)
T ss_pred c---------CCCCCC
Confidence 7 999874
No 116
>KOG0194|consensus
Probab=100.00 E-value=2.1e-40 Score=352.69 Aligned_cols=268 Identities=21% Similarity=0.280 Sum_probs=216.5
Q ss_pred ccccCCCccccccCCeEEeeeecccCceeEEEEEEC---C---eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhh
Q psy4039 183 QVETLPDVDDVKVDDIQIGKFIAKGTNAVVYEATFR---G---VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRL 256 (588)
Q Consensus 183 ~~~~~~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---g---~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~ 256 (588)
...+....|++..++..+.+.||+|+||.||+|+++ + .+||||....... ........+.
T Consensus 144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~--------------~~~~~~~e~m 209 (474)
T KOG0194|consen 144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE--------------LTKEQIKEFM 209 (474)
T ss_pred cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccccc--------------ccHHHHHHHH
Confidence 345567889999999999999999999999999997 2 2389999853110 1111345677
Q ss_pred hHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcC
Q psy4039 257 NEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCA 335 (588)
Q Consensus 257 ~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~ 335 (588)
+|.++|+.+ +|||||++||++.+..| +++|||+| +|+|.+||++.+.
T Consensus 210 ~EArvMr~l----~H~NVVr~yGVa~~~~P----------------------------l~ivmEl~~gGsL~~~L~k~~~ 257 (474)
T KOG0194|consen 210 KEARVMRQL----NHPNVVRFYGVAVLEEP----------------------------LMLVMELCNGGSLDDYLKKNKK 257 (474)
T ss_pred HHHHHHHhC----CCCCEEEEEEEEcCCCc----------------------------cEEEEEecCCCcHHHHHHhCCC
Confidence 899999997 99999999999998765 99999999 6899999999866
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCcc
Q psy4039 336 QLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA 415 (588)
Q Consensus 336 ~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~ 415 (588)
.++..+...++.+.+.||+|||++++|||||-++|+|++.+ ..+||+|||+++.-....... ...--...
T Consensus 258 ~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~-----~~vKISDFGLs~~~~~~~~~~-----~~~klPir 327 (474)
T KOG0194|consen 258 SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKK-----GVVKISDFGLSRAGSQYVMKK-----FLKKLPIR 327 (474)
T ss_pred CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCC-----CeEEeCccccccCCcceeecc-----ccccCcce
Confidence 79999999999999999999999999999999999999987 678999999987643211100 01123568
Q ss_pred ccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccc----cccccccccCCCCCCccHHHHHHHHHhhh
Q psy4039 416 LMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSAR----NTDYEVNALPQLNTNVPEVMRRLVAKLLE 490 (588)
Q Consensus 416 Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~l~~Li~~~L~ 490 (588)
|+|||.+.... ++.++|||||||++||+++ |..||.+... ..........+.+...|.++..++.+||.
T Consensus 328 WLAPEtl~~~~------~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~ 401 (474)
T KOG0194|consen 328 WLAPETLNTGI------FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWK 401 (474)
T ss_pred ecChhhhccCc------cccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhcc
Confidence 99999997663 6689999999999999998 7889987422 11113344455677889999999999999
Q ss_pred hCCCCCCCHHHHHHHHhhhhhc
Q psy4039 491 NDPSDRPSAELAATVCQLYLWA 512 (588)
Q Consensus 491 ~dP~~Rps~~e~l~~L~~~~~~ 512 (588)
.||++||+|.++.+.++...-.
T Consensus 402 ~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 402 KDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred CChhhccCHHHHHHHHHHHHhc
Confidence 9999999999999988765433
No 117
>KOG0596|consensus
Probab=100.00 E-value=6.2e-40 Score=342.24 Aligned_cols=261 Identities=23% Similarity=0.235 Sum_probs=202.6
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+.-..|++.++||+||.+.||++... .+.||+|++... +.......-+.+||.+|.+| ..|
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~---------------~~D~qtl~gy~nEI~lL~KL---kg~ 419 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL---------------EADNQTLDGYRNEIALLNKL---KGH 419 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh---------------hcCHHHHHHHHHHHHHHHHh---cCC
Confidence 33356999999999999999999986 467888876321 11122334577899999998 689
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
.+||+|++|-..+ +.+|+|||+.+.+|.++|++....+....+..+..||+.
T Consensus 420 ~~IIqL~DYEv~d----------------------------~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~ 471 (677)
T KOG0596|consen 420 DKIIQLYDYEVTD----------------------------GYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLL 471 (677)
T ss_pred ceEEEEeeeeccC----------------------------ceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHH
Confidence 9999999985542 249999999999999999987545554589999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC---
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL--- 428 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~--- 428 (588)
|+.++|.+||||.||||.|+|+-. |.+||+|||.|..+...... -.....+||+.||+||.+......
T Consensus 472 aV~~IH~~gIVHSDLKPANFLlVk------G~LKLIDFGIA~aI~~DTTs---I~kdsQvGT~NYMsPEAl~~~~s~~~~ 542 (677)
T KOG0596|consen 472 AVKTIHQHGIVHSDLKPANFLLVK------GRLKLIDFGIANAIQPDTTS---IVKDSQVGTVNYMSPEALTDMSSSREN 542 (677)
T ss_pred HHHHHHHhceeecCCCcccEEEEe------eeEEeeeechhcccCccccc---eeeccccCcccccCHHHHhhccccccC
Confidence 999999999999999999999975 58999999999987664322 122367899999999999754332
Q ss_pred --ccCCCCCcCchhhHHHHHHHHhcCCCCCcccc-ccccc-------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 429 --FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA-RNTDY-------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 429 --~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~-~~~~~-------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
.....+.++||||+|||||+|+.|++||..-. ....+ .....|.++.. .++.++++.||.+||.+||+
T Consensus 543 ~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~s 620 (677)
T KOG0596|consen 543 GKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWS 620 (677)
T ss_pred CCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCC
Confidence 22235578999999999999999999997621 11111 11122233322 23999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCccccC
Q psy4039 499 AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~~ 519 (588)
..++|+ |||++.
T Consensus 621 i~eLLq---------hpFl~~ 632 (677)
T KOG0596|consen 621 IPELLQ---------HPFLQI 632 (677)
T ss_pred cHHHhc---------Cccccc
Confidence 999998 999975
No 118
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.9e-39 Score=331.13 Aligned_cols=262 Identities=20% Similarity=0.203 Sum_probs=203.0
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--Ce----eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GV----EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~----~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+..++|++.+.||+|+||+||+|.+. +. .||+|.+.... ... ....+..|+.++..+
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~----~~~------------~~~~~~~~~~~l~~l- 66 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS----GRQ------------TFQEITDHMLAMGSL- 66 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc----chH------------HHHHHHHHHHHHhcC-
Confidence 34478999999999999999999985 33 47777763210 000 112334466666665
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
.||||+++++++... ..++++||+ +|+|.+++......+++..+..+
T Consensus 67 ---~h~~iv~~~~~~~~~-----------------------------~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i 114 (279)
T cd05111 67 ---DHAYIVRLLGICPGA-----------------------------SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNW 114 (279)
T ss_pred ---CCCCcceEEEEECCC-----------------------------ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHH
Confidence 899999999986431 267889998 68999999876668999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.|++.||.|||+++++||||||+|||++.+ +.+||+|||+++.......... .....|+..|+|||++.+.
T Consensus 115 ~~qi~~~l~~lH~~~iiH~dlkp~nili~~~-----~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~y~~pE~~~~~ 186 (279)
T cd05111 115 CVQIAKGMYYLEEHRMVHRNLAARNILLKSD-----SIVQIADFGVADLLYPDDKKYF---YSEHKTPIKWMALESILFG 186 (279)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC-----CcEEEcCCccceeccCCCcccc---cCCCCCcccccCHHHhccC
Confidence 9999999999999999999999999999987 7899999999986543221111 1134577899999999765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. ++.++|||||||++|||++ |..||.+..... .......+..+..++.++.+++.+||..||++|||+.+
T Consensus 187 ~------~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~e 260 (279)
T cd05111 187 R------YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKE 260 (279)
T ss_pred C------cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHH
Confidence 4 4578999999999999998 999997642211 11222333445567889999999999999999999999
Q ss_pred HHHHHhhhhhcCCccc
Q psy4039 502 AATVCQLYLWAPKHWL 517 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~ 517 (588)
+++.+..+.-.+.+|+
T Consensus 261 l~~~l~~~~~~~~~~~ 276 (279)
T cd05111 261 LANEFTRMARDPPRYL 276 (279)
T ss_pred HHHHHHHHHhCCccee
Confidence 9999988888887776
No 119
>KOG1026|consensus
Probab=100.00 E-value=1.8e-40 Score=363.86 Aligned_cols=261 Identities=25% Similarity=0.301 Sum_probs=213.5
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDML 261 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~i 261 (588)
...+++..+.+..+.||+|.||+||+|... ..-||||.++... ....+++|++|+++
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a----------------~~~~~~dF~REaeL 542 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA----------------ENQARQDFRREAEL 542 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc----------------cHHHHHHHHHHHHH
Confidence 344677788899999999999999999987 4579999985321 11145788999999
Q ss_pred HhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc------
Q psy4039 262 MNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC------ 334 (588)
Q Consensus 262 l~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~------ 334 (588)
+..+ +|||||+|+|+|.+..| +++|+||| .|||.+||+.+.
T Consensus 543 la~l----~H~nIVrLlGVC~~~~P----------------------------~~MvFEYm~~GDL~eFLra~sP~a~~~ 590 (774)
T KOG1026|consen 543 LAEL----QHPNIVRLLGVCREGDP----------------------------LCMVFEYMDHGDLHEFLRARSPKADKL 590 (774)
T ss_pred HHhc----cCCCeEEEEEEEccCCe----------------------------eEEEEEecccccHHHHHHhhCCccccc
Confidence 9998 99999999999998654 99999999 699999998531
Q ss_pred ---CC----CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccc
Q psy4039 335 ---AQ----LSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSAD 407 (588)
Q Consensus 335 ---~~----l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 407 (588)
.. |+..+.+.|+.|||.|++||-++.+|||||-.+|+||.++ ..|||+|||++|..-........
T Consensus 591 ~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~-----l~VKIsDfGLsRdiYssDYYk~~--- 662 (774)
T KOG1026|consen 591 ASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN-----LVVKISDFGLSRDIYSSDYYKVR--- 662 (774)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc-----eEEEecccccchhhhhhhhhccc---
Confidence 22 8899999999999999999999999999999999999988 89999999999875332111111
Q ss_pred ccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc---ccccCCCCCCccHHHHH
Q psy4039 408 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE---VNALPQLNTNVPEVMRR 483 (588)
Q Consensus 408 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 483 (588)
....-.+.|||||.+.... ++++||||||||+|||+++ |+.||++-.....+. ....-+-|++||.++.+
T Consensus 663 ~~t~lPIRWMppEsIly~k------FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~ 736 (774)
T KOG1026|consen 663 GNTLLPIRWMPPESILYGK------FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYS 736 (774)
T ss_pred CCceeeeecCCHHHhhcCc------ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHH
Confidence 0112356899999998776 6689999999999999997 899998854433332 23334568899999999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHhhhhh
Q psy4039 484 LVAKLLENDPSDRPSAELAATVCQLYLW 511 (588)
Q Consensus 484 Li~~~L~~dP~~Rps~~e~l~~L~~~~~ 511 (588)
||..||+.+|.+||++.++-..|+.+.-
T Consensus 737 LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 737 LMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 9999999999999999999998886543
No 120
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3e-39 Score=329.46 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=196.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|++. +..||||.+...... ......+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~h~~i 61 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE---------------EGVPSTAIREISLLKEL----QHPNI 61 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc---------------CCchHHHHHHHHHHHhc----CCCCE
Confidence 5889999999999999999986 789999998532111 01223456688999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC--AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~--~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. .+++||||+.++|.+++.... ..+++..+..++.|+++|
T Consensus 62 ~~~~~~~~~~~----------------------------~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~ 113 (285)
T cd07861 62 VCLQDVLMQES----------------------------RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQG 113 (285)
T ss_pred eeeEEEEeeCC----------------------------eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 99999987632 489999999989999987532 478999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++.+ +.++|+|||++......... .....|++.|+|||++.+...
T Consensus 114 L~~lH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~----- 178 (285)
T cd07861 114 ILFCHSRRVLHRDLKPQNLLIDNK-----GVIKLADFGLARAFGIPVRV-----YTHEVVTLWYRAPEVLLGSPR----- 178 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEEcCC-----CcEEECcccceeecCCCccc-----ccCCcccccccChHHhcCCCC-----
Confidence 999999999999999999999987 88999999999765432111 113457889999999865431
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccc------------------------ccc-------ccccCCCCCCccHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNT------------------------DYE-------VNALPQLNTNVPEVM 481 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~------------------------~~~-------~~~~~~~~~~~~~~l 481 (588)
.+.++|||||||++|||++|++||.+..... .+. ..........+++++
T Consensus 179 ~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (285)
T cd07861 179 YSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDG 258 (285)
T ss_pred cCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHH
Confidence 3467999999999999999999997532100 000 000001123578899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+++|.+||+.||++|||+.++++ |||+
T Consensus 259 ~~li~~~l~~dP~~Rpt~~~ll~---------~~~~ 285 (285)
T cd07861 259 LDLLEKMLIYDPAKRISAKKALN---------HPYF 285 (285)
T ss_pred HHHHHHHhcCChhhCCCHHHHhc---------CCCC
Confidence 99999999999999999999999 9996
No 121
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-39 Score=341.53 Aligned_cols=259 Identities=22% Similarity=0.341 Sum_probs=198.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. ++.||||++..... .. ......+.+|+.++..+ .|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----------~~---~~~~~~~~~e~~~l~~~----~~~~ 62 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM-----------LK---RAETACFREERNVLVNG----DCQW 62 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH-----------Hh---hHHHHHHHHHHHHHHhC----CCCC
Confidence 57999999999999999999987 68899999843110 00 01223355678888776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..|+||||+ +|+|.+++......+++..+..++.|++.|
T Consensus 63 i~~l~~~~~~~~----------------------------~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~ 114 (331)
T cd05624 63 ITTLHYAFQDEN----------------------------YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLA 114 (331)
T ss_pred EeeEEEEEEcCC----------------------------EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 689999998755589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++........ ......||+.|||||++.+...... .
T Consensus 115 L~~lH~~~iiHrDlkp~Nill~~~-----~~~kl~DfG~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~-~ 184 (331)
T cd05624 115 IHSIHQLHYVHRDIKPDNVLLDMN-----GHIRLADFGSCLKMNQDGTV----QSSVAVGTPDYISPEILQAMEDGMG-K 184 (331)
T ss_pred HHHHHHCCeeeccCchHHEEEcCC-----CCEEEEeccceeeccCCCce----eeccccCCcccCCHHHHhccccCCC-C
Confidence 999999999999999999999977 78999999999765432211 1113569999999999875321110 1
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc-------cccCCCCCCccHHHHHHHHHhhhhCCCC--CCCHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV-------NALPQLNTNVPEVMRRLVAKLLENDPSD--RPSAELAA 503 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~l~~Li~~~L~~dP~~--Rps~~e~l 503 (588)
++.++|||||||++|||++|+.||........+.. ...+.....+++++++++.+||..++.+ |+++++++
T Consensus 185 ~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~ 264 (331)
T cd05624 185 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFK 264 (331)
T ss_pred CCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHh
Confidence 34689999999999999999999976422111110 1122223457899999999999865544 46899988
Q ss_pred HHHhhhhhcCCccccC
Q psy4039 504 TVCQLYLWAPKHWLYG 519 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~~ 519 (588)
+ |+|++.
T Consensus 265 ~---------h~~f~~ 271 (331)
T cd05624 265 K---------HAFFEG 271 (331)
T ss_pred c---------CCCcCC
Confidence 8 999874
No 122
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-39 Score=330.18 Aligned_cols=250 Identities=21% Similarity=0.266 Sum_probs=196.4
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|++. |..||+|.+...... ......+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~---------------~~~~~~~~~ei~~l~~l----~h~~i 61 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---------------EGVPSSALREICLLKEL----KHKNI 61 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc---------------ccCccchhHHHHHHHhc----CCCCe
Confidence 4788999999999999999996 889999998532111 01223455699999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.+.. ..++++||++++|.+++......+++..+..++.||++||.
T Consensus 62 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~ 113 (284)
T cd07839 62 VRLYDVLHSDK----------------------------KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLA 113 (284)
T ss_pred eeHHHHhccCC----------------------------ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999887632 48999999999999998875557999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+++|+||||||+||+++.+ +.+||+|||+++........ .....+++.|+|||++.+... ++
T Consensus 114 ~LH~~~i~H~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~-----~~ 178 (284)
T cd07839 114 FCHSHNVLHRDLKPQNLLINKN-----GELKLADFGLARAFGIPVRC-----YSAEVVTLWYRPPDVLFGAKL-----YS 178 (284)
T ss_pred HHHHCCEecCCCCHHHEEEcCC-----CcEEECccchhhccCCCCCC-----cCCCccccCCcChHHHhCCcc-----cC
Confidence 9999999999999999999987 78999999999765432111 113457899999999866431 35
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccc-c---------------c-------ccccc---------CCCCCCccHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNT-D---------------Y-------EVNAL---------PQLNTNVPEVMR 482 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-~---------------~-------~~~~~---------~~~~~~~~~~l~ 482 (588)
.++|||||||++|||++|..||....... . + ..... ......++++++
T Consensus 179 ~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (284)
T cd07839 179 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGR 258 (284)
T ss_pred cHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHH
Confidence 68999999999999999998864321100 0 0 00000 111235788999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++|.+||+.||.+|||++++++ |||+
T Consensus 259 ~li~~~l~~~P~~R~t~~~il~---------h~~f 284 (284)
T cd07839 259 DLLQNLLVCNPVQRISAEEALQ---------HPYF 284 (284)
T ss_pred HHHHHHhcCChhhcCCHHHHhc---------CCCC
Confidence 9999999999999999999999 9996
No 123
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-39 Score=337.83 Aligned_cols=261 Identities=19% Similarity=0.218 Sum_probs=202.6
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--C----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--G----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+...+|++.+.||+|+||.||+|++. + ..||||++..... . ...+.+.+|+.+++.+
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~-------------~~~~~~~~e~~~l~~l- 66 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---P-------------KANKEILDEAYVMASV- 66 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC---H-------------HHHHHHHHHHHHHHhC-
Confidence 34478999999999999999999874 2 3489999842110 0 0123456688888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
+||||++++++|... ..++++||+ +|+|.+++......+++..+..+
T Consensus 67 ---~h~niv~~~g~~~~~-----------------------------~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~ 114 (316)
T cd05108 67 ---DNPHVCRLLGICLTS-----------------------------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 114 (316)
T ss_pred ---CCCCCCeEEEEEcCC-----------------------------CceeeeecCCCCCHHHHHHhccccCCHHHHHHH
Confidence 999999999988652 267889998 68999999886657899999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.||+.||+|||+++|+||||||+|||++.+ +.+||+|||+++......... ......++..|+|||++.+.
T Consensus 115 ~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~-----~~~kl~DfG~a~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~ 186 (316)
T cd05108 115 CVQIAKGMNYLEERRLVHRDLAARNVLVKTP-----QHVKITDFGLAKLLGADEKEY---HAEGGKVPIKWMALESILHR 186 (316)
T ss_pred HHHHHHHHHHHHhcCeeccccchhheEecCC-----CcEEEccccccccccCCCcce---eccCCccceeecChHHhccC
Confidence 9999999999999999999999999999887 789999999998765422111 01123356789999999765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. ++.++|||||||++|||++ |..||.+..... ........+.+..++.++.+++.+||..||++||++.+
T Consensus 187 ~------~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~ 260 (316)
T cd05108 187 I------YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRE 260 (316)
T ss_pred C------CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 4 4578999999999999997 999997632211 11122233445678899999999999999999999999
Q ss_pred HHHHHhhhhhcCCcc
Q psy4039 502 AATVCQLYLWAPKHW 516 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w 516 (588)
++..+....-.+..|
T Consensus 261 l~~~l~~~~~~~~~~ 275 (316)
T cd05108 261 LIIEFSKMARDPQRY 275 (316)
T ss_pred HHHHHHHHHcCCchh
Confidence 999887665444443
No 124
>KOG0574|consensus
Probab=100.00 E-value=1.4e-41 Score=331.26 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=208.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+-|++.++||+|+||.||+|.++ |+.||||.+.. ..+. +.+..||.||+++ +.|+
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV---~sDL----------------QEIIKEISIMQQC----~S~y 89 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV---DTDL----------------QEIIKEISIMQQC----KSKY 89 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc---cchH----------------HHHHHHHHHHHHc----CCch
Confidence 34778899999999999999998 89999999842 2222 3345599999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
+|++||.|.. +..+|+|||||+ ||+.+.++.++.+|++.++..++++.++|
T Consensus 90 VVKYYGSYFK----------------------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKG 141 (502)
T KOG0574|consen 90 VVKYYGSYFK----------------------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKG 141 (502)
T ss_pred hhhhhhhhcc----------------------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhH
Confidence 9999987654 335999999995 99999999888899999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|+|||...-||||||+.|||++.+ +.+||+|||.|-.+.+... ...+..|||.|||||++..-.
T Consensus 142 L~YLH~~~KIHRDIKAGNILLNT~-----G~AKLADFGVAGQLTDTMA-----KRNTVIGTPFWMAPEVI~EIG------ 205 (502)
T KOG0574|consen 142 LQYLHDLKKIHRDIKAGNILLNTD-----GIAKLADFGVAGQLTDTMA-----KRNTVIGTPFWMAPEVIEEIG------ 205 (502)
T ss_pred HHHHHHHHHHHhhcccccEEEccc-----chhhhhhccccchhhhhHH-----hhCccccCcccccHHHHHHhc------
Confidence 999999999999999999999988 8999999999977544221 123578999999999998655
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccc-cccccc--ccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARN-TDYEVN--ALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~-~~~~~~--~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|..++||||+|++..||.-|++||.+-... ..+... ..|. -|+.++.++.|+|++||.++|++|-|+-++++
T Consensus 206 Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~--- 282 (502)
T KOG0574|consen 206 YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE--- 282 (502)
T ss_pred cchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh---
Confidence 567899999999999999999999874222 222211 1122 24567889999999999999999999999877
Q ss_pred hhhhcCCccccCCCCC
Q psy4039 508 LYLWAPKHWLYGATPS 523 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~~ 523 (588)
|||++...+.
T Consensus 283 ------H~FiknA~g~ 292 (502)
T KOG0574|consen 283 ------HTFIKNAPGC 292 (502)
T ss_pred ------hhhhcCCCcc
Confidence 9999966554
No 125
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7.7e-40 Score=341.89 Aligned_cols=246 Identities=24% Similarity=0.333 Sum_probs=189.0
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH-HHhhhcCCCCCCceEEEe
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM-LMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~-il~~l~~l~~HpNIV~l~ 278 (588)
+.||+|+||.||+|.+. |+.||||++........ .....+..|.. +++.+ +||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~~l~~~----~hp~iv~~~ 62 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR--------------KEQKHIMAERNVLLKNV----KHPFLVGLH 62 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh--------------hHHHHHHHHHHHHHHhC----CCCCCccEE
Confidence 46999999999999986 78999999853211000 01122333444 34444 999999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++.+.. .+|+||||+ +|+|..++.... .+++.++..++.||+.||.|||
T Consensus 63 ~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH 113 (325)
T cd05604 63 YSFQTTE----------------------------KLYFVLDFVNGGELFFHLQRER-SFPEPRARFYAAEIASALGYLH 113 (325)
T ss_pred EEEecCC----------------------------EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9887632 489999999 679998887654 7999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|||||++.+.. ++.++
T Consensus 114 ~~givH~Dlkp~NIll~~~-----~~~kL~DfG~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~ 177 (325)
T cd05604 114 SINIVYRDLKPENILLDSQ-----GHVVLTDFGLCKEGIAQSD-----TTTTFCGTPEYLAPEVIRKQP------YDNTV 177 (325)
T ss_pred HCCeeecCCCHHHeEECCC-----CCEEEeecCCcccCCCCCC-----CcccccCChhhCCHHHHcCCC------CCCcC
Confidence 9999999999999999988 7999999999875322111 112467999999999997654 45789
Q ss_pred chhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH----HHHHHHhhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE----LAATVCQLYLW 511 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~----e~l~~L~~~~~ 511 (588)
|||||||++|||++|..||........+.. ......+..++..+.+++.+||+.||.+||++. ++++
T Consensus 178 DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~------- 250 (325)
T cd05604 178 DWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQE------- 250 (325)
T ss_pred ccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhc-------
Confidence 999999999999999999976432221111 112234456889999999999999999999874 6665
Q ss_pred cCCccccC
Q psy4039 512 APKHWLYG 519 (588)
Q Consensus 512 ~~h~w~~~ 519 (588)
|||+..
T Consensus 251 --h~~f~~ 256 (325)
T cd05604 251 --HPFFES 256 (325)
T ss_pred --CCCcCC
Confidence 999974
No 126
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.1e-39 Score=330.99 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=199.1
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|+..+.||+|+||.||+|.+. ++.||||.+........ .....+.+|+.+++.+ +|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~--------------~~~~~~~~E~~il~~l----~~~~i 62 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR--------------KGESMALNEKQILEKV----NSRFV 62 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccch--------------HHHHHHHHHHHHHHhC----CCCCe
Confidence 3678889999999999999997 78999999853221110 0112345688899887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~g 352 (588)
+++++.+.+.. .+++||||+ +++|.+++.... ..+++..+..++.|++.|
T Consensus 63 ~~~~~~~~~~~----------------------------~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 63 VSLAYAYETKD----------------------------ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred eeeeEEEecCC----------------------------EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 99998887632 489999999 689999986542 369999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+||||||+||+++.+ +.++|+|||++.....+... ....||+.|+|||++.+..
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~-----~~~~l~Dfg~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~------ 177 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH-----GHIRISDLGLAVHVPEGQTI------KGRVGTVGYMAPEVVKNER------ 177 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC-----CCEEEeeccceeecCCCccc------cCCCCCccccChHHHcCCC------
Confidence 999999999999999999999987 78999999998765432211 1346899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AEL 501 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e 501 (588)
++.++||||+||++|||++|+.||........ .........+..+++++++|+.+||+.||++||| +++
T Consensus 178 ~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~ 257 (285)
T cd05630 178 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGARE 257 (285)
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHH
Confidence 45789999999999999999999976322110 0111122345678899999999999999999999 899
Q ss_pred HHHHHhhhhhcCCccccC
Q psy4039 502 AATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~ 519 (588)
+++ |||++.
T Consensus 258 ~~~---------h~~~~~ 266 (285)
T cd05630 258 VKE---------HPLFKQ 266 (285)
T ss_pred HHc---------Chhhhc
Confidence 988 999864
No 127
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-39 Score=331.83 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=200.2
Q ss_pred cccCCeEEeeeecccCceeEEEEEECC-------eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFRG-------VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~g-------~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
+.+++|++.+.||+|+||.||+|.+.+ ..||+|.+..... . .....+.+|+.++..+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~----~------------~~~~~~~~ei~~l~~l 65 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE----P------------KVQQEFRQEAELMSDL 65 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC----H------------HHHHHHHHHHHHHHhc
Confidence 456789999999999999999998762 5699999843210 0 0123466789999887
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----------
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---------- 334 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---------- 334 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++....
T Consensus 66 ----~h~~i~~~~~~~~~~~----------------------------~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~ 113 (283)
T cd05048 66 ----QHPNIVCLLGVCTKEQ----------------------------PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESG 113 (283)
T ss_pred ----CCcccceEEEEEcCCC----------------------------ceEEEEecCCCCcHHHHHHhcCCCcccccccc
Confidence 8999999999987632 389999999 689999997641
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccccc
Q psy4039 335 -----AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE 409 (588)
Q Consensus 335 -----~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 409 (588)
..+++.++..++.|++.||.|||+++|+||||||+||+++++ +.++|+|||+++......... ....
T Consensus 114 ~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~-----~~~~L~dfg~~~~~~~~~~~~---~~~~ 185 (283)
T cd05048 114 DETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG-----LTVKISDFGLSRDIYSADYYR---VQSK 185 (283)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC-----CcEEECCCcceeecccccccc---ccCC
Confidence 358899999999999999999999999999999999999987 789999999997653321111 1113
Q ss_pred ccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHH
Q psy4039 410 LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLV 485 (588)
Q Consensus 410 ~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li 485 (588)
..+|+.|+|||.+.+.. .+.++|||||||++|||++ |..||.+...... ......+..+..+|+++.+|+
T Consensus 186 ~~~~~~y~aPE~~~~~~------~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 259 (283)
T cd05048 186 SLLPVRWMPPEAILYGK------FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALM 259 (283)
T ss_pred CcccccccCHHHhccCc------CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHH
Confidence 45788999999986554 4578999999999999998 9999976332211 112233445678999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHh
Q psy4039 486 AKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+||+.||.+||++.++++.|+
T Consensus 260 ~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 260 IECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHccCChhhCcCHHHHHHHHh
Confidence 9999999999999999998775
No 128
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.2e-39 Score=340.36 Aligned_cols=245 Identities=26% Similarity=0.365 Sum_probs=187.3
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH-HHhhhcCCCCCCceEEEe
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM-LMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~-il~~l~~l~~HpNIV~l~ 278 (588)
+.||+|+||+||+|.+. ++.||+|++........ .....+..|.. +++.+ +||||++++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~~l~~~----~h~~Iv~~~ 62 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK--------------KEEKHIMSERNVLLKNV----KHPFLVGLH 62 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh--------------hHHHHHHHHHHHHHHhC----CCCCCCcee
Confidence 46999999999999987 67899999853111000 01112223333 34444 899999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++.+.. .+|+||||+ +|+|.+++.... .+++..+..++.||++||.|||
T Consensus 63 ~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH 113 (325)
T cd05602 63 FSFQTAD----------------------------KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH 113 (325)
T ss_pred EEEEcCC----------------------------eEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9887632 489999999 579999997654 7899999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++
T Consensus 114 ~~giiHrDlkp~Nili~~~-----~~~kl~DfG~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~ 177 (325)
T cd05602 114 SLNIVYRDLKPENILLDSQ-----GHIVLTDFGLCKENIEHNG-----TTSTFCGTPEYLAPEVLHKQP------YDRTV 177 (325)
T ss_pred HCCeEecCCCHHHeEECCC-----CCEEEccCCCCcccccCCC-----CcccccCCccccCHHHHcCCC------CCCcc
Confidence 9999999999999999987 7899999999975322111 112467999999999997654 45789
Q ss_pred chhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH----HHHHHHhhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE----LAATVCQLYLW 511 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~----e~l~~L~~~~~ 511 (588)
||||+||++|||++|..||.+......+.. ......+..+++++.+++.+||+.||.+||++. ++++
T Consensus 178 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~------- 250 (325)
T cd05602 178 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKN------- 250 (325)
T ss_pred ccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhc-------
Confidence 999999999999999999976432222111 112234567899999999999999999999876 4444
Q ss_pred cCCcccc
Q psy4039 512 APKHWLY 518 (588)
Q Consensus 512 ~~h~w~~ 518 (588)
|+|+.
T Consensus 251 --~~~~~ 255 (325)
T cd05602 251 --HIFFS 255 (325)
T ss_pred --CcccC
Confidence 88875
No 129
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.5e-40 Score=344.22 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=188.6
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|+||+||+|.+. ++.||||++...... .+. .......|..++..+ .+..||||+++++++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----------~~~---~~~~~~~e~~~l~~~-~~~~~p~i~~~~~~~ 65 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-----------AKK---EVAHTIGERNILVRT-LLDESPFIVGLKFSF 65 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-----------hhh---HHHHHHHHHHHHHHh-ccCCCCcCcceEEEE
Confidence 799999999999987 789999998531110 000 011123355555543 112799999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+.. .+|+||||+ +|+|..++.... .+++..+..++.||++||+|||++|
T Consensus 66 ~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~ 116 (330)
T cd05586 66 QTDS----------------------------DLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYD 116 (330)
T ss_pred ecCC----------------------------eEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7632 489999999 689999987654 7999999999999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchh
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAW 440 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVw 440 (588)
|+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+... ++.++|||
T Consensus 117 ivHrDlkp~Nili~~~-----~~~kl~Dfg~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-----~~~~~Dvw 181 (330)
T cd05586 117 IVYRDLKPENILLDAT-----GHIALCDFGLSKANLTDNK-----TTNTFCGTTEYLAPEVLLDEKG-----YTKHVDFW 181 (330)
T ss_pred eEeccCCHHHeEECCC-----CCEEEecCCcCcCCCCCCC-----CccCccCCccccCHHHHcCCCC-----CCCcccee
Confidence 9999999999999987 7899999999875432211 1124679999999999865432 35789999
Q ss_pred hHHHHHHHHhcCCCCCcccccccccccc--ccCCCC-CCccHHHHHHHHHhhhhCCCCCC----CHHHHHHHHhhhhhcC
Q psy4039 441 TAGTVAYEIFGHDNPFYQSARNTDYEVN--ALPQLN-TNVPEVMRRLVAKLLENDPSDRP----SAELAATVCQLYLWAP 513 (588)
Q Consensus 441 S~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~~~~-~~~~~~l~~Li~~~L~~dP~~Rp----s~~e~l~~L~~~~~~~ 513 (588)
||||++|||++|..||........+... ....++ ..+++++++++.+||+.||.+|| +++++++
T Consensus 182 slGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~--------- 252 (330)
T cd05586 182 SLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE--------- 252 (330)
T ss_pred ccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc---------
Confidence 9999999999999999774322211111 111222 34789999999999999999998 6788777
Q ss_pred CccccC
Q psy4039 514 KHWLYG 519 (588)
Q Consensus 514 h~w~~~ 519 (588)
|||+..
T Consensus 253 h~~~~~ 258 (330)
T cd05586 253 HPFFAD 258 (330)
T ss_pred CccccC
Confidence 999974
No 130
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4e-39 Score=324.53 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=201.1
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|++.++||+|+||.||+|.+. +..||+|.+..... ..+.+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~------------------~~~~~~~e~~~l~~l---- 58 (261)
T cd05072 1 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM------------------SVQAFLEEANLMKTL---- 58 (261)
T ss_pred CcCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch------------------hHHHHHHHHHHHHhC----
Confidence 5677799999999999999999999876 57899998742110 123466789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++... ...+++..+..++.
T Consensus 59 ~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 110 (261)
T cd05072 59 QHDKLVRLYAVVTKEE----------------------------PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 110 (261)
T ss_pred CCCCeeeEEEEEcCCC----------------------------CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHH
Confidence 8999999998876532 389999999 68999999764 34689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|+++||+|||+.+++||||||+||+++.+ +.++|+|||+++......... .....++..|+|||++.+..
T Consensus 111 ~l~~~l~~LH~~~i~H~dl~p~nili~~~-----~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~- 180 (261)
T cd05072 111 QIAEGMAYIERKNYIHRDLRAANVLVSES-----LMCKIADFGLARVIEDNEYTA----REGAKFPIKWTAPEAINFGS- 180 (261)
T ss_pred HHHHHHHHHHHCCeeccccchhhEEecCC-----CcEEECCCccceecCCCceec----cCCCccceecCCHHHhccCC-
Confidence 99999999999999999999999999987 789999999998765432211 11234677899999986654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||........ .......+....+|.++.+++.+||+.||++||+++++.
T Consensus 181 -----~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 255 (261)
T cd05072 181 -----FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQ 255 (261)
T ss_pred -----CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 4468999999999999998 9999965322111 111122234456889999999999999999999999999
Q ss_pred HHHh
Q psy4039 504 TVCQ 507 (588)
Q Consensus 504 ~~L~ 507 (588)
++|+
T Consensus 256 ~~l~ 259 (261)
T cd05072 256 SVLD 259 (261)
T ss_pred HHHh
Confidence 8776
No 131
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.1e-39 Score=323.71 Aligned_cols=248 Identities=21% Similarity=0.250 Sum_probs=197.1
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+.++|++.+.||+|+||.||++.++ +..+|+|.+..... ....+.+|+.+++.+ +||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~------------------~~~~~~~e~~~l~~l----~h~ 59 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM------------------SEEDFIEEAKVMMKL----SHP 59 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc------------------cHHHHHHHHHHHHHC----CCC
Confidence 4478999999999999999999987 45899998743211 123466799999987 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..+++|||+ +|+|.+++......+++..+..++.|++.
T Consensus 60 ~i~~~~~~~~~~~----------------------------~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05114 60 KLVQLYGVCTQQK----------------------------PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCE 111 (256)
T ss_pred CceeEEEEEccCC----------------------------CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 9999999987632 389999999 68999999865447899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+||||||+||+++.+ +.+||+|||+++......... .....++..|+|||++.+..
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~-----~~~kl~d~g~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~----- 177 (256)
T cd05114 112 GMEYLERNSFIHRDLAARNCLVSST-----GVVKVSDFGMTRYVLDDEYTS----SSGAKFPVKWSPPEVFNFSK----- 177 (256)
T ss_pred HHHHHHHCCccccccCcceEEEcCC-----CeEEECCCCCccccCCCceec----cCCCCCchhhCChhhcccCc-----
Confidence 9999999999999999999999987 789999999997653321111 11233567899999987554
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++||||||+++|||++ |+.||........ ......+..+...+.++.+++.+||+.||++||+++++++.|
T Consensus 178 -~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 178 -YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 4468999999999999999 8999976432211 111222334556788999999999999999999999998754
No 132
>KOG4279|consensus
Probab=100.00 E-value=1.5e-40 Score=352.43 Aligned_cols=245 Identities=25% Similarity=0.339 Sum_probs=204.7
Q ss_pred eecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 203 FIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
+||+|+||+||.|++. ...+|||-|...+ ....+-+.+||.+.+.+ +|.|||+++|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd-----------------sr~~QPLhEEIaLH~~L----rHkNIVrYLGs 640 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD-----------------SREVQPLHEEIALHSTL----RHKNIVRYLGS 640 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc-----------------chhhccHHHHHHHHHHH----hhHhHHHHhhc
Confidence 8999999999999998 5678999884221 11334556799999988 99999999988
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHH
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQL--SMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l--~~~~~~~i~~ql~~gL~yLH 357 (588)
+.+ ++.+-|.||-. +|||.++|+...+++ ++...-.+.+||++||.|||
T Consensus 641 ~se----------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH 692 (1226)
T KOG4279|consen 641 VSE----------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH 692 (1226)
T ss_pred cCC----------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh
Confidence 643 34588999998 789999999986677 88899999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++.|||||||-+|||++.-. +.+||+|||.++.+.. .+..+.++.||..|||||++..++.. |+.++
T Consensus 693 en~IVHRDIKGDNVLvNTyS----GvlKISDFGTsKRLAg-----inP~TETFTGTLQYMAPEvIDqG~RG----YG~aA 759 (1226)
T KOG4279|consen 693 ENKIVHRDIKGDNVLVNTYS----GVLKISDFGTSKRLAG-----INPCTETFTGTLQYMAPEVIDQGPRG----YGKAA 759 (1226)
T ss_pred hcceeeccccCCcEEEeecc----ceEEecccccchhhcc-----CCccccccccchhhhChHhhccCCcC----CCchh
Confidence 99999999999999998653 8999999999987543 22333478899999999999987755 56789
Q ss_pred chhhHHHHHHHHhcCCCCCccc--ccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhc
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQS--ARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWA 512 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~--~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~ 512 (588)
|||||||++.||.||++||..- ..... -.....|++|..++.+++.+|.+|+.+||.+||++.+++.
T Consensus 760 DIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~-------- 831 (1226)
T KOG4279|consen 760 DIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ-------- 831 (1226)
T ss_pred hhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc--------
Confidence 9999999999999999999762 11111 1234677899999999999999999999999999999888
Q ss_pred CCcccc
Q psy4039 513 PKHWLY 518 (588)
Q Consensus 513 ~h~w~~ 518 (588)
.||++
T Consensus 832 -DpFlq 836 (1226)
T KOG4279|consen 832 -DPFLQ 836 (1226)
T ss_pred -Ccccc
Confidence 88888
No 133
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=5.8e-39 Score=324.19 Aligned_cols=253 Identities=22% Similarity=0.253 Sum_probs=202.1
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
|++...+|.+.+.||+|+||.||+|.+. +..||+|.+..... ....+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------------------~~~~~~~e~~~l~~l--- 59 (263)
T cd05052 1 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------------------EVEEFLKEAAVMKEI--- 59 (263)
T ss_pred CCCchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch------------------HHHHHHHHHHHHHhC---
Confidence 4566788999999999999999999986 78999999842110 123456788999887
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLF 346 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~ 346 (588)
+||||+++++++.... .++++|||+ +++|.+++... ...+++..+..++
T Consensus 60 -~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~ 110 (263)
T cd05052 60 -KHPNLVQLLGVCTREP----------------------------PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 110 (263)
T ss_pred -CCCChhheEEEEcCCC----------------------------CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHH
Confidence 8999999999887632 389999999 68999999764 3368999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|+++||+|||++||+||||||+|||++++ +.+||+|||+++......... .....+++.|+|||++.+..
T Consensus 111 ~ql~~~l~~lH~~~i~H~dlkp~nil~~~~-----~~~kl~df~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 181 (263)
T cd05052 111 TQISSAMEYLEKKNFIHRDLAARNCLVGEN-----HLVKVADFGLSRLMTGDTYTA----HAGAKFPIKWTAPESLAYNK 181 (263)
T ss_pred HHHHHHHHHHHhCCEeecccCcceEEEcCC-----CcEEeCCCccccccccceeec----cCCCCCccccCCHHHhccCC
Confidence 999999999999999999999999999877 789999999998765422111 11223467899999987654
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|||||||++|||++ |..||.+...... ......+..+..+|.++.+++.+||..||++||++.++
T Consensus 182 ------~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l 255 (263)
T cd05052 182 ------FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255 (263)
T ss_pred ------CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 4578999999999999998 9999876322211 11122345567889999999999999999999999999
Q ss_pred HHHHhh
Q psy4039 503 ATVCQL 508 (588)
Q Consensus 503 l~~L~~ 508 (588)
++.|+.
T Consensus 256 ~~~l~~ 261 (263)
T cd05052 256 HQAFET 261 (263)
T ss_pred HHHHHh
Confidence 987764
No 134
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.8e-39 Score=346.20 Aligned_cols=262 Identities=22% Similarity=0.275 Sum_probs=204.8
Q ss_pred CCCccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHH
Q psy4039 187 LPDVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNED 259 (588)
Q Consensus 187 ~~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei 259 (588)
....++++.++|.+++.||+|+||.||+|++. +..||||++...... ...+.+.+|+
T Consensus 28 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~----------------~~~~~~~~Ei 91 (400)
T cd05105 28 YDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS----------------SEKQALMSEL 91 (400)
T ss_pred CCCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh----------------HHHHHHHHHH
Confidence 34567788899999999999999999999874 246999998532110 0123567799
Q ss_pred HHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----
Q psy4039 260 MLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---- 334 (588)
Q Consensus 260 ~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---- 334 (588)
.+++.+ ..|||||+++++|.+.. .+|+||||| +|+|.++|..+.
T Consensus 92 ~~l~~l---~~HpnIv~l~~~~~~~~----------------------------~~~lv~Ey~~~g~L~~~l~~~~~~~~ 140 (400)
T cd05105 92 KIMTHL---GPHLNIVNLLGACTKSG----------------------------PIYIITEYCFYGDLVNYLHKNRDNFL 140 (400)
T ss_pred HHHHhc---CCCCCeeeEEEEEccCC----------------------------ceEEEEEecCCCcHHHHHHHhhhhhh
Confidence 999887 35999999999987632 389999999 689999987531
Q ss_pred --------------------------------------------------------------------------------
Q psy4039 335 -------------------------------------------------------------------------------- 334 (588)
Q Consensus 335 -------------------------------------------------------------------------------- 334 (588)
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
T cd05105 141 SRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDS 220 (400)
T ss_pred ccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchh
Confidence
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 335 -----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 335 -----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
..+++.++..++.|+++||.|||+++|+||||||+|||++.+ +.+||+|||+++........
T Consensus 221 ~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~-----~~~kL~DfGla~~~~~~~~~-- 293 (400)
T cd05105 221 EVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG-----KIVKICDFGLARDIMHDSNY-- 293 (400)
T ss_pred hHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC-----CEEEEEeCCcceeccccccc--
Confidence 147888899999999999999999999999999999999987 78999999999865432211
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc----ccccccCCCCCCcc
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD----YEVNALPQLNTNVP 478 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~----~~~~~~~~~~~~~~ 478 (588)
.......+++.|+|||++.+.. ++.++|||||||++|||++ |..||........ ......+..+..+|
T Consensus 294 -~~~~~~~~~~~y~aPE~~~~~~------~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (400)
T cd05105 294 -VSKGSTFLPVKWMAPESIFDNL------YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHAT 366 (400)
T ss_pred -cccCCcCCCcceEChhhhcCCC------CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCC
Confidence 1111345778999999987654 4578999999999999997 9999876422111 11122334556789
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.++.+++.+||+.||++||++.++.+.|+..
T Consensus 367 ~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 9999999999999999999999999987743
No 135
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-39 Score=338.40 Aligned_cols=245 Identities=24% Similarity=0.326 Sum_probs=187.6
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH-HHhhhcCCCCCCceEEEe
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM-LMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~-il~~l~~l~~HpNIV~l~ 278 (588)
+.||+|+||.||+|.+. +..||||++...... .. .....+..|+. +++.+ +||||++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----------~~---~~~~~~~~e~~~~l~~~----~h~~iv~~~ 62 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-----------KK---KEQNHIMAERNVLLKNL----KHPFLVGLH 62 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-----------Hh---hHHHHHHHHHHHHHHhC----CCCCcccee
Confidence 46999999999999986 789999998531110 00 01122333443 45554 999999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++.+.. ..|+||||+ +|+|..++.... .+++..+..++.||++||.|||
T Consensus 63 ~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH 113 (321)
T cd05603 63 YSFQTAE----------------------------KLYFVLDYVNGGELFFHLQRER-CFLEPRARFYAAEVASAIGYLH 113 (321)
T ss_pred eEEEcCC----------------------------EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9887632 489999999 579988887643 7899999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++||+||||||+|||++.+ +.+||+|||+++....... .....+||+.|+|||++.+.. ++.++
T Consensus 114 ~~~ivH~Dlkp~NIll~~~-----~~~kl~Dfg~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~------~~~~~ 177 (321)
T cd05603 114 SLNIIYRDLKPENILLDSQ-----GHVVLTDFGLCKEGVEPEE-----TTSTFCGTPEYLAPEVLRKEP------YDRTV 177 (321)
T ss_pred HCCeEeccCCHHHeEECCC-----CCEEEccCCCCccCCCCCC-----ccccccCCcccCCHHHhcCCC------CCCcC
Confidence 9999999999999999987 7999999999875322111 112467999999999987654 45789
Q ss_pred chhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH----HHHHHHhhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE----LAATVCQLYLW 511 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~----e~l~~L~~~~~ 511 (588)
|||||||++|||++|..||........+.. .....++...+.++.+++.+||+.||.+||++. ++++
T Consensus 178 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~------- 250 (321)
T cd05603 178 DWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKN------- 250 (321)
T ss_pred cccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhC-------
Confidence 999999999999999999976432211111 122345567889999999999999999999764 5444
Q ss_pred cCCcccc
Q psy4039 512 APKHWLY 518 (588)
Q Consensus 512 ~~h~w~~ 518 (588)
|+|+.
T Consensus 251 --~~~~~ 255 (321)
T cd05603 251 --HVFFS 255 (321)
T ss_pred --CCCcC
Confidence 88875
No 136
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.4e-39 Score=330.85 Aligned_cols=270 Identities=21% Similarity=0.252 Sum_probs=211.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. +..||+|.+.... +. .....+.+|+.+++.+ +|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~-------------~~~~~~~~e~~~l~~~----~~~~ 60 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DE-------------SKFNQIIMELDILHKA----VSPY 60 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CH-------------HHHHHHHHHHHHHHhc----CCCc
Confidence 46889999999999999999997 8899999984211 10 0123456688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh--cCCCCHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER--CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~--~~~l~~~~~~~i~~ql~ 350 (588)
|+++++++... ...++||||+ +++|..++... ...+++..+..++.|++
T Consensus 61 i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 112 (286)
T cd06622 61 IVDFYGAFFIE----------------------------GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVV 112 (286)
T ss_pred HHhhhhheecC----------------------------CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 99999987752 2489999999 57999988764 23789999999999999
Q ss_pred HHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 351 EGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 351 ~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
.||.|||+ .+|+||||||+||+++.+ +.++|+|||++........ ....|++.|+|||++.+.....
T Consensus 113 ~~l~~LH~~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~ 180 (286)
T cd06622 113 KGLKFLKEEHNIIHRDVKPTNVLVNGN-----GQVKLCDFGVSGNLVASLA-------KTNIGCQSYMAPERIKSGGPNQ 180 (286)
T ss_pred HHHHHHHhcCCEeeCCCCHHHEEECCC-----CCEEEeecCCcccccCCcc-------ccCCCccCccCcchhcCCCCCc
Confidence 99999997 599999999999999987 7899999999876533211 1345888999999986543222
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
...++.++|||||||++|||++|..||........ ......+.++..+++++.++|.+||+.+|++||++++++
T Consensus 181 ~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 260 (286)
T cd06622 181 NPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLL 260 (286)
T ss_pred cCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 22245789999999999999999999965322111 111233456667899999999999999999999999999
Q ss_pred HHHhhhhhcCCccccCCCCChhHHHHHHHhh
Q psy4039 504 TVCQLYLWAPKHWLYGATPSHNEIMQWLLTL 534 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~~ 534 (588)
+ |||+........++..|+...
T Consensus 261 ~---------~~~~~~~~~~~~~~~~~~~~~ 282 (286)
T cd06622 261 E---------HPWLVKYKNADVDMAEWVTGA 282 (286)
T ss_pred c---------ChhhhhccCCccchHHHHHHH
Confidence 9 999986666677777776543
No 137
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.1e-39 Score=328.58 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=189.5
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|+||.||++..+ |+.||+|.+........ ........|+.+++.+ +||||+++++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~--------------~~~~~~~~E~~il~~l----~hp~i~~~~~~~ 62 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK--------------SGEKMALLEKEILEKV----NSPFIVNLAYAF 62 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc--------------hhhHHHHHHHHHHHhc----CCCcEEEEEEEE
Confidence 799999999999986 88999999843111100 0122334588899887 999999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
.+.. ..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.
T Consensus 63 ~~~~----------------------------~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 114 (277)
T cd05607 63 ESKT----------------------------HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM 114 (277)
T ss_pred ecCC----------------------------eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 7632 489999999 689998886542 3689999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
||+||||||+|||++.+ +.++|+|||++.....+... ....||+.|+|||++.+.. ++.++||
T Consensus 115 ~ivH~dikp~Nili~~~-----~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~------~~~~~Dv 177 (277)
T cd05607 115 DIVYRDMKPENVLLDDQ-----GNCRLSDLGLAVELKDGKTI------TQRAGTNGYMAPEILKEEP------YSYPVDW 177 (277)
T ss_pred CEEEccCChHhEEEcCC-----CCEEEeeceeeeecCCCcee------eccCCCCCccCHHHHccCC------CCCchhH
Confidence 99999999999999987 78999999999775442211 1346899999999997654 4578999
Q ss_pred hhHHHHHHHHhcCCCCCcccccccc---c-c---ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhc
Q psy4039 440 WTAGTVAYEIFGHDNPFYQSARNTD---Y-E---VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWA 512 (588)
Q Consensus 440 wS~Gvil~ElltG~~Pf~~~~~~~~---~-~---~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~ 512 (588)
||+||++|||++|..||........ . . ....+.....+++++++|+.+||+.||++||++.++++.+..
T Consensus 178 wslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~---- 253 (277)
T cd05607 178 FAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK---- 253 (277)
T ss_pred HHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc----
Confidence 9999999999999999975321110 0 0 011111224678999999999999999999999543321111
Q ss_pred CCccccC
Q psy4039 513 PKHWLYG 519 (588)
Q Consensus 513 ~h~w~~~ 519 (588)
|+|++.
T Consensus 254 -h~~f~~ 259 (277)
T cd05607 254 -HEFFKT 259 (277)
T ss_pred -ChhhcC
Confidence 999964
No 138
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.3e-39 Score=321.68 Aligned_cols=255 Identities=23% Similarity=0.285 Sum_probs=202.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++++.||+|++|.||.|.+. +++||+|.+.......... .....+.+|+.+++.+ +|||
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~------------~~~~~~~~e~~~l~~l----~~~~ 65 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETK------------KEVNALECEIQLLKNL----QHER 65 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhH------------HHHHHHHHHHHHHHhC----CCCC
Confidence 67899999999999999999875 7899999986432211110 0123456788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .++++|||+ +++|.+++.... .+++..+..++.|++.|
T Consensus 66 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~ 116 (263)
T cd06625 66 IVQYYGCLRDDE----------------------------TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEG 116 (263)
T ss_pred eeeeEEEEccCC----------------------------eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 599999999 579999998764 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+||||||+||+++++ +.++|+|||+++........ ........|+..|+|||++.+..
T Consensus 117 l~~lH~~~i~H~dl~p~nilv~~~-----~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~------ 183 (263)
T cd06625 117 VEYLHSNMIVHRDIKGANILRDSA-----GNVKLGDFGASKRLQTICSS--GTGMKSVTGTPYWMSPEVISGEG------ 183 (263)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCC-----CCEEEeecccceeccccccc--cccccCCCcCccccCcceeccCC------
Confidence 999999999999999999999987 78999999999765432111 00001356888999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+.++||||+||++|||++|+.||........ ......+.++..++.++.+++.+||..+|.+|||+.++++
T Consensus 184 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~---- 259 (263)
T cd06625 184 YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR---- 259 (263)
T ss_pred CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh----
Confidence 45789999999999999999999976322111 1112234566788999999999999999999999999999
Q ss_pred hhhcCCccc
Q psy4039 509 YLWAPKHWL 517 (588)
Q Consensus 509 ~~~~~h~w~ 517 (588)
|+|+
T Consensus 260 -----~~~~ 263 (263)
T cd06625 260 -----HFFV 263 (263)
T ss_pred -----CCCC
Confidence 9996
No 139
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.5e-39 Score=340.17 Aligned_cols=260 Identities=22% Similarity=0.270 Sum_probs=201.4
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|++.-++|++.+.||+|+||.||+|.+. ++.||+|+++.... .. ..+.+..|+.++.
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~~-------------~~~~~~~E~~~~~ 65 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---AS-------------EYKALMTELKILI 65 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC---HH-------------HHHHHHHHHHHHH
Confidence 5666789999999999999999999754 46899999843110 00 1123456888887
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
++ .+||||++++++|.... ..++++|||+ +++|.+++....
T Consensus 66 ~l---~~h~niv~~~~~~~~~~---------------------------~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~ 115 (337)
T cd05054 66 HI---GHHLNVVNLLGACTKPG---------------------------GPLMVIVEYCKFGNLSNYLRSKRECFSPYRN 115 (337)
T ss_pred hh---ccCcchhheeeeEecCC---------------------------CCEEEEEecCCCCCHHHHHHhcccccccccc
Confidence 76 57999999999886531 1388999999 689999986421
Q ss_pred ----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCce
Q psy4039 335 ----------------------------------------------------AQLSMHERVLLFTQLLEGVTHLNMHRTA 362 (588)
Q Consensus 335 ----------------------------------------------------~~l~~~~~~~i~~ql~~gL~yLH~~~Iv 362 (588)
..+++..+..++.||+.||.|||++||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~iv 195 (337)
T cd05054 116 KSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCI 195 (337)
T ss_pred ccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 2689999999999999999999999999
Q ss_pred eccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhH
Q psy4039 363 HRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTA 442 (588)
Q Consensus 363 HrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~ 442 (588)
||||||+|||++.+ +.++|+|||+++......... ......++..|+|||++.+.. ++.++|||||
T Consensus 196 HrDikp~Nill~~~-----~~vkL~DfG~a~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~Sl 261 (337)
T cd05054 196 HRDLAARNILLSEN-----NVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPESIFDKV------YTTQSDVWSF 261 (337)
T ss_pred cCCCCcceEEEeCC-----CcEEEeccccchhcccCcchh---hccCCCCCccccCcHHhcCCC------CCccccHHHH
Confidence 99999999999987 789999999998754322111 111345678899999987654 5678999999
Q ss_pred HHHHHHHhc-CCCCCccccccc----cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 443 GTVAYEIFG-HDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 443 Gvil~Ellt-G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
||++|||++ |..||.+..... .......+..+..+++++.+++.+||+.+|++||+++++++.|...+
T Consensus 262 Gv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 262 GVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999999997 999996532111 11122233445677899999999999999999999999999887554
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.2e-39 Score=320.47 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=202.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|++. +..||+|.+...... ......+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~h~~i 61 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN---------------RREREEAIDEARVLAKL----DSSYI 61 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC---------------HHHHHHHHHHHHHHHhc----CCCCe
Confidence 5788999999999999999986 789999998532211 11234456788888887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. ..+++|||+ +++|.+++... ...+++..++.++.|++.|
T Consensus 62 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a 113 (256)
T cd08529 62 IRYYESFLDKG----------------------------KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG 113 (256)
T ss_pred ehheeeeccCC----------------------------EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 99999887632 489999999 67999999875 4579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+||||||+||+++.+ +.++|+|||+++........ .....|++.|+|||++.+..
T Consensus 114 l~~lH~~~i~h~dl~~~nili~~~-----~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~------ 177 (256)
T cd08529 114 LAHLHSKKILHRDIKSLNLFLDAY-----DNVKIGDLGVAKLLSDNTNF-----ANTIVGTPYYLSPELCEDKP------ 177 (256)
T ss_pred HHHHHHCCcccCCCCcceEEEeCC-----CCEEEcccccceeccCccch-----hhccccCccccCHHHhcCCC------
Confidence 999999999999999999999987 78999999999876542211 11356889999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|||++|+.||........ ......+.++..++.++.+++.+||+.+|++||++.+++.
T Consensus 178 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~----- 252 (256)
T cd08529 178 YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR----- 252 (256)
T ss_pred CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh-----
Confidence 45789999999999999999999976432111 1123344555678899999999999999999999999998
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 253 ----~~~~ 256 (256)
T cd08529 253 ----NPSL 256 (256)
T ss_pred ----CCCC
Confidence 9996
No 141
>KOG0589|consensus
Probab=100.00 E-value=6.5e-40 Score=343.05 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=209.1
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|..++.||+|+||.++.++++ +..|++|.|.-...... .++....|+.+++++ .||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~---------------~r~~A~~E~~lis~~----~hP 63 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP---------------ERRSAIQEMDLLSKL----LHP 63 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch---------------hhHHHHHHHHHHHhc----cCC
Confidence 478999999999999999988887 77999999964322211 222456799999987 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLL 350 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~ 350 (588)
|||.+.+.|.+. +..++|||+|| +|+|.+.|.... ..++++.+..++.|++
T Consensus 64 ~iv~y~ds~~~~---------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~ 116 (426)
T KOG0589|consen 64 NIVEYKDSFEED---------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQIL 116 (426)
T ss_pred CeeeeccchhcC---------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 999999988763 22499999999 689999998764 6799999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.|+.|||+++|+|||||+.|||++.+ ..+||+|||+|+........ ..+.+|||.||.||++.+.+
T Consensus 117 ~av~ylH~~~iLHRDlK~~Nifltk~-----~~VkLgDfGlaK~l~~~~~~-----a~tvvGTp~YmcPEil~d~p---- 182 (426)
T KOG0589|consen 117 LAVNYLHENRVLHRDLKCANIFLTKD-----KKVKLGDFGLAKILNPEDSL-----ASTVVGTPYYMCPEILSDIP---- 182 (426)
T ss_pred HHHHHHHhhhhhcccchhhhhhcccc-----CceeecchhhhhhcCCchhh-----hheecCCCcccCHHHhCCCC----
Confidence 99999999999999999999999998 77899999999998764322 22678999999999999887
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
|+.|+|||||||++|||++-+++|......... ......+++..++.+++.+|..||..+|+.||++.+++.
T Consensus 183 --Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 183 --YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred --CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 668999999999999999999999875332221 223356788899999999999999999999999999988
No 142
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.8e-39 Score=325.06 Aligned_cols=259 Identities=21% Similarity=0.281 Sum_probs=199.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|++.+.||+|+||.||+|.+. ++.||+|.+..... ....+..|+.++..+ .+|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------------------~~~~~~~e~~~l~~~---~~h~~ 64 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------------------EEEEIKQEINMLKKY---SHHRN 64 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc------------------cHHHHHHHHHHHHHh---cCCCC
Confidence 56888899999999999999986 78999999853210 123345688888776 47999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
|++++++|.+..+ .+.....|++|||+ +++|.+++... ...+++..+..++.|++.
T Consensus 65 i~~~~~~~~~~~~----------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~ 122 (272)
T cd06637 65 IATYYGAFIKKNP----------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 122 (272)
T ss_pred eeeEeeEEeecCC----------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 9999999876421 01123589999999 57999999864 346899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+++|+||||||+||+++.+ +.++|+|||+++....... ......|++.|+|||++.+.... ..
T Consensus 123 ~l~~LH~~~ivh~dl~~~nili~~~-----~~~~l~Dfg~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~-~~ 191 (272)
T cd06637 123 GLSHLHQHKVIHRDIKGQNVLLTEN-----AEVKLVDFGVSAQLDRTVG-----RRNTFIGTPYWMAPEVIACDENP-DA 191 (272)
T ss_pred HHHHHHHCCCccCCCCHHHEEECCC-----CCEEEccCCCceecccccc-----cCCcccccccccCHhHhccccCc-CC
Confidence 9999999999999999999999987 7899999999976543211 11246699999999998643211 11
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc----ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.++.++|||||||++|||++|..||.......... .......+..++.++.+|+.+||..||.+|||+++++.
T Consensus 192 ~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~--- 268 (272)
T cd06637 192 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK--- 268 (272)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh---
Confidence 24568999999999999999999996532111111 11111223467889999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 269 ------~~~~ 272 (272)
T cd06637 269 ------HPFI 272 (272)
T ss_pred ------CCCC
Confidence 9996
No 143
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.5e-39 Score=327.85 Aligned_cols=253 Identities=22% Similarity=0.277 Sum_probs=198.4
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+.+++|++.+.||+|+||+||+|.+. +..||+|.+..... . .....+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~---~-------------~~~~~~~~E~~~l~~l- 64 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN---P-------------QQWGEFQQEASLMAEL- 64 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC---H-------------HHHHHHHHHHHHHhhC-
Confidence 45688999999999999999999862 57899999853111 0 0123456788999887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----------
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----------- 334 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----------- 334 (588)
+||||+++++++.... ..+++|||+ +++|.+++..+.
T Consensus 65 ---~h~niv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 113 (283)
T cd05090 65 ---HHPNIVCLLGVVTQEQ----------------------------PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDE 113 (283)
T ss_pred ---CCCCeeeEEEEEecCC----------------------------ceEEEEEcCCCCcHHHHHHhcCCCCcccccccc
Confidence 8999999999987632 389999999 579999996431
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccccc
Q psy4039 335 -----AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE 409 (588)
Q Consensus 335 -----~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 409 (588)
..+++.++..++.|++.||.|||+++|+||||||+|||++.+ ..+||+|||+++.......... ...
T Consensus 114 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~-----~~~kl~dfg~~~~~~~~~~~~~---~~~ 185 (283)
T cd05090 114 DGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ-----LHVKISDLGLSREIYSADYYRV---QPK 185 (283)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC-----CcEEeccccccccccCCcceec---ccC
Confidence 247899999999999999999999999999999999999987 7899999999987543221111 123
Q ss_pred ccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHH
Q psy4039 410 LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLV 485 (588)
Q Consensus 410 ~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li 485 (588)
..++..|+|||++.+.. .+.++|||||||++|||++ |..||.+..... .......+..+..+++.+.+++
T Consensus 186 ~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 259 (283)
T cd05090 186 SLLPIRWMPPEAIMYGK------FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLM 259 (283)
T ss_pred CCccceecChHHhccCC------CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 44678899999986554 4578999999999999998 999997632211 1112223345677899999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHh
Q psy4039 486 AKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+||+.||.+||++.++++.+.
T Consensus 260 ~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 260 TECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHcccCcccCcCHHHHHHHhh
Confidence 9999999999999999988665
No 144
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.3e-39 Score=326.26 Aligned_cols=261 Identities=19% Similarity=0.213 Sum_probs=201.3
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--Ce----eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GV----EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~----~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+..++|++.+.||+|+||+||+|++. +. .||||++....... ....+.+|+.++..+
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~----------------~~~~~~~e~~~l~~~- 66 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK----------------ANKEILDEAYVMAGV- 66 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH----------------HHHHHHHHHHHHHhc-
Confidence 34588999999999999999999875 33 58999985322110 123455678888776
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
.||||+++++++... ..+++||++ +|+|.+++......+++..+..+
T Consensus 67 ---~~~~i~~~~~~~~~~-----------------------------~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~ 114 (279)
T cd05109 67 ---GSPYVCRLLGICLTS-----------------------------TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNW 114 (279)
T ss_pred ---CCCCCceEEEEEcCC-----------------------------CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHH
Confidence 899999999988642 267899999 68999999876557999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.|++.||.|||+++|+||||||+|||++++ +.+||+|||+++......... ......+++.|+|||.+.+.
T Consensus 115 ~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~-----~~~kL~dfG~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~ 186 (279)
T cd05109 115 CVQIAKGMSYLEEVRLVHRDLAARNVLVKSP-----NHVKITDFGLARLLDIDETEY---HADGGKVPIKWMALESILHR 186 (279)
T ss_pred HHHHHHHHHHHHHCCeeccccccceEEEcCC-----CcEEECCCCceeeccccccee---ecCCCccchhhCCHHHhccC
Confidence 9999999999999999999999999999877 789999999998764322110 11123356789999998665
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. ++.++|||||||++|||++ |..||....... .......++.+..++.++.+++.+||+.||++||++.+
T Consensus 187 ~------~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~ 260 (279)
T cd05109 187 R------FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRE 260 (279)
T ss_pred C------CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 4 4578999999999999998 899986532111 11122233445678899999999999999999999999
Q ss_pred HHHHHhhhhhcCCcc
Q psy4039 502 AATVCQLYLWAPKHW 516 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w 516 (588)
++..+......+.+|
T Consensus 261 l~~~l~~~~~~~~~~ 275 (279)
T cd05109 261 LVDEFSRMARDPSRF 275 (279)
T ss_pred HHHHHHHhhcCCcCe
Confidence 998777665444444
No 145
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.1e-39 Score=325.53 Aligned_cols=269 Identities=18% Similarity=0.200 Sum_probs=203.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. |..||||.+....... ....+..|+.++.+. ..|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------~~~~~~~e~~~~~~~---~~~~~ 61 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ----------------EQKRLLMDLDISMRS---VDCPY 61 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH----------------HHHHHHHHHHHHHHH---cCCCC
Confidence 47899999999999999999997 8899999985321111 011222344443332 48999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER---CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~---~~~l~~~~~~~i~~ql~ 350 (588)
|+++++++.+.. ..+++|||++|+|.+++... ...+++..++.++.|++
T Consensus 62 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~ 113 (283)
T cd06617 62 TVTFYGALFREG----------------------------DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIV 113 (283)
T ss_pred eeeeeEEEecCC----------------------------cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 999999987632 38999999999999988753 34689999999999999
Q ss_pred HHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 351 EGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 351 ~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
.||.|||++ +++||||||+|||++.+ +.+||+|||+++....... .....|+..|+|||++.+...
T Consensus 114 ~~l~~lH~~~~i~h~dlkp~nil~~~~-----~~~kl~dfg~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-- 180 (283)
T cd06617 114 KALEYLHSKLSVIHRDVKPSNVLINRN-----GQVKLCDFGISGYLVDSVA------KTIDAGCKPYMAPERINPELN-- 180 (283)
T ss_pred HHHHHHhhcCCeecCCCCHHHEEECCC-----CCEEEeecccccccccccc------cccccCCccccChhhcCCccc--
Confidence 999999997 99999999999999987 7999999999976543211 112458899999999865321
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccc-c---cccccccCCCC-CCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN-T---DYEVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~-~---~~~~~~~~~~~-~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
...++.++|+|||||++|||++|..||...... . .......+.++ ..+|+++.++|.+||..+|++||+++++++
T Consensus 181 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 181 QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011457899999999999999999999642111 0 01111222222 357899999999999999999999999999
Q ss_pred HHhhhhhcCCccccCCCCChhHHHHHHHh
Q psy4039 505 VCQLYLWAPKHWLYGATPSHNEIMQWLLT 533 (588)
Q Consensus 505 ~L~~~~~~~h~w~~~~~~~~~~~~~~l~~ 533 (588)
|||+....-...+..+++..
T Consensus 261 ---------~~~~~~~~~~~~~~~~~~~~ 280 (283)
T cd06617 261 ---------HPFFELHLSKNTDVASFVSL 280 (283)
T ss_pred ---------CchhhhcccccHHHHHHHHh
Confidence 99999666555555555543
No 146
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-38 Score=330.43 Aligned_cols=260 Identities=21% Similarity=0.274 Sum_probs=202.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. +..||+|.+.... .. .....+.+|+++++.+ +|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~---~~-------------~~~~~~~~E~~~l~~l----~h~~ 60 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI---KP-------------AIRNQIIRELKVLHEC----NSPY 60 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc---CH-------------HHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 7889999984311 00 0123456799999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|++++++|.+.. .++++|||+ +++|.+++.... .+++..+..++.|+++|
T Consensus 61 iv~~~~~~~~~~----------------------------~~~lv~ey~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~ 111 (308)
T cd06615 61 IVGFYGAFYSDG----------------------------EISICMEHMDGGSLDQVLKKAG-RIPENILGKISIAVLRG 111 (308)
T ss_pred CCeEEEEEeeCC----------------------------EEEEEeeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 579999998764 78999999999999999
Q ss_pred HHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 353 VTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 353 L~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
|.|||+ .+++||||||+|||++.+ +.+||+|||++........ ....|++.|+|||++.+..
T Consensus 112 l~~lH~~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~aPE~~~~~~----- 174 (308)
T cd06615 112 LTYLREKHKIMHRDVKPSNILVNSR-----GEIKLCDFGVSGQLIDSMA-------NSFVGTRSYMSPERLQGTH----- 174 (308)
T ss_pred HHHHHhhCCEEECCCChHHEEEecC-----CcEEEccCCCccccccccc-------ccCCCCcCccChhHhcCCC-----
Confidence 999997 699999999999999987 7899999999875433211 1456899999999986543
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------------------------ccccCC
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------------------------VNALPQ 472 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------------------------~~~~~~ 472 (588)
.+.++|||||||++|||++|+.||.......... ....+.
T Consensus 175 -~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (308)
T cd06615 175 -YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPK 253 (308)
T ss_pred -CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCcc
Confidence 4468999999999999999999986421100000 000111
Q ss_pred CC-CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCCChhHHHHHH
Q psy4039 473 LN-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWL 531 (588)
Q Consensus 473 ~~-~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l 531 (588)
.+ ..++.++++++.+||..||++|||+.++++ |||+....-...+..+|.
T Consensus 254 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~---------~~~~~~~~~~~~~~~~~~ 304 (308)
T cd06615 254 LPSGAFSDEFQDFVDKCLKKNPKERADLKELTK---------HPFIKRAELEEVDFAGWV 304 (308)
T ss_pred CcCcccCHHHHHHHHHHccCChhhCcCHHHHhc---------Chhhhhcccccchhhhhh
Confidence 11 236788999999999999999999999999 999985444444444554
No 147
>KOG0667|consensus
Probab=100.00 E-value=4.3e-39 Score=344.70 Aligned_cols=250 Identities=23% Similarity=0.254 Sum_probs=197.8
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC-C-CCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL-P-PHP 272 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l-~-~Hp 272 (588)
+|.+.+.||+|+||.|.+|.+. ++.||||++++... +. .+-..|+.||..|+.. . .--
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~----------f~--------~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR----------FL--------RQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH----------HH--------HHHHHHHHHHHHHhccCCCCCe
Confidence 7899999999999999999997 78999999975321 11 1223589999998421 1 234
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~ 351 (588)
|+|+++++|.... +++||+|.+..+|.++|+.+. ..|+...++.|+.||+.
T Consensus 249 n~Vrm~d~F~fr~----------------------------HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~ 300 (586)
T KOG0667|consen 249 NIVRMLDYFYFRN----------------------------HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILT 300 (586)
T ss_pred eEEEeeecccccc----------------------------ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 9999999998632 599999999999999999863 46999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.+||+.+|||+||||+||||.+-.. ..+||+|||.|........ +..-+..|.|||++.+.+
T Consensus 301 ~L~~L~~l~IIHcDLKPENILL~~~~r---~~vKVIDFGSSc~~~q~vy--------tYiQSRfYRAPEVILGlp----- 364 (586)
T KOG0667|consen 301 ALLFLHELGIIHCDLKPENILLKDPKR---SRIKVIDFGSSCFESQRVY--------TYIQSRFYRAPEVILGLP----- 364 (586)
T ss_pred HHHHHHhCCeeeccCChhheeeccCCc---CceeEEecccccccCCcce--------eeeeccccccchhhccCC-----
Confidence 999999999999999999999986532 5899999999987655432 345677999999999988
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccc------------------------------cc--cccc-----c-------
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSA------------------------------RN--TDYE-----V------- 467 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~------------------------------~~--~~~~-----~------- 467 (588)
++.+.||||||||+.||++|.+.|.++. .. .... .
T Consensus 365 -Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~ 443 (586)
T KOG0667|consen 365 -YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKS 443 (586)
T ss_pred -CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccc
Confidence 6689999999999999999988887620 00 0000 0
Q ss_pred -------------cccC-C-------CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 468 -------------NALP-Q-------LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 468 -------------~~~~-~-------~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
...| . +...-...+.|++++||+.||.+|+|+.++++ |||+.
T Consensus 444 ~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~---------Hpfl~ 506 (586)
T KOG0667|consen 444 PEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN---------HPFLT 506 (586)
T ss_pred hhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc---------Ccccc
Confidence 0001 0 00011245799999999999999999999999 99998
No 148
>KOG0610|consensus
Probab=100.00 E-value=1.9e-39 Score=329.45 Aligned_cols=264 Identities=22% Similarity=0.277 Sum_probs=210.8
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEECC--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFRG--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
....+.++.|++.+.||+|.-|+||++.+++ ..+|+|+|.+..... .+ .-.+...|-+||+.+
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-----rk---------Kl~Ra~tE~eIL~~l- 134 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-----RK---------KLKRAQTEREILSLL- 134 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-----hh---------HHHHHHHHHHHHHhc-
Confidence 4456777999999999999999999999985 799999995422211 01 222345588888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVL 344 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~ 344 (588)
.||-+..||..|+.+. ..+++|||| +|+|..+++.+ +..+++..++.
T Consensus 135 ---DHPFlPTLYa~fet~~----------------------------~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRF 183 (459)
T KOG0610|consen 135 ---DHPFLPTLYASFETDK----------------------------YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARF 183 (459)
T ss_pred ---CCCccchhhheeeccc----------------------------eeEEEEecCCCccHHHHHhhCCCCccchhhHHH
Confidence 9999999999998743 499999999 78999999876 45799999999
Q ss_pred HHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCC-------------------------
Q psy4039 345 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGL------------------------- 399 (588)
Q Consensus 345 i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~------------------------- 399 (588)
++..|+-||+|||-.|||.|||||+||||.++ +++.|+||.++.......
T Consensus 184 YaAEvl~ALEYLHmlGivYRDLKPENILvred-----GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f 258 (459)
T KOG0610|consen 184 YAAEVLLALEYLHMLGIVYRDLKPENILVRED-----GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCF 258 (459)
T ss_pred HHHHHHHHHHHHHhhceeeccCCcceeEEecC-----CcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccccc
Confidence 99999999999999999999999999999998 999999999876421100
Q ss_pred --------c------------------cccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCC
Q psy4039 400 --------S------------------MQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHD 453 (588)
Q Consensus 400 --------~------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~ 453 (588)
. .+.......++||-.|+|||++.+.. .+.++|+|+|||++|||+.|.
T Consensus 259 ~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G------HgsAVDWWtfGIflYEmLyG~ 332 (459)
T KOG0610|consen 259 SPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG------HGSAVDWWTFGIFLYEMLYGT 332 (459)
T ss_pred ccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC------CCchhhHHHHHHHHHHHHhCC
Confidence 0 00011223568999999999999886 457799999999999999999
Q ss_pred CCCcccccccccccc--ccCCCC--CCccHHHHHHHHHhhhhCCCCCCC----HHHHHHHHhhhhhcCCcccc
Q psy4039 454 NPFYQSARNTDYEVN--ALPQLN--TNVPEVMRRLVAKLLENDPSDRPS----AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 454 ~Pf~~~~~~~~~~~~--~~~~~~--~~~~~~l~~Li~~~L~~dP~~Rps----~~e~l~~L~~~~~~~h~w~~ 518 (588)
.||.+......+... ..+.++ ..++..++|||+++|.+||.+|.. +.||.+ ||||+
T Consensus 333 TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~---------HpFF~ 396 (459)
T KOG0610|consen 333 TPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR---------HPFFE 396 (459)
T ss_pred CCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc---------Ccccc
Confidence 999987655443321 111222 256789999999999999999998 888888 99987
No 149
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-38 Score=321.56 Aligned_cols=257 Identities=23% Similarity=0.256 Sum_probs=201.7
Q ss_pred CeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
+|++++.||+|+||.||+|... +..+|||.+.......... . + ....+.+|+.+++.+ +|+||+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~---~---~-----~~~~~~~e~~~l~~l----~~~~i~ 65 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAA---E---K-----EYEKLQEEVDLLKSL----KHVNIV 65 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhH---H---H-----HHHHHHHHHHHHHhc----CCCCEe
Confidence 4778899999999999999875 7889999985322111100 0 0 123466799999887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+. ...+++|||+ +++|.+++.... .+++..+..++.|++.||.
T Consensus 66 ~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~ 116 (265)
T cd06631 66 QYLGTCLDD----------------------------NTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVA 116 (265)
T ss_pred eEeeEeecC----------------------------CeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Confidence 999998763 2489999999 679999997654 7899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCC-CccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG-LSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~-~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
|||+.+|+|+||||+||+++++ +.++|+|||++...... .....+.......||..|+|||++.+.. .
T Consensus 117 ~lH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~------~ 185 (265)
T cd06631 117 YLHNNCVVHRDIKGNNVMLMPN-----GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESG------Y 185 (265)
T ss_pred HHHhCCcccCCcCHHhEEECCC-----CeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCC------C
Confidence 9999999999999999999977 79999999998764321 1111111122456899999999987654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc-----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
+.++|||||||++|+|++|..||......... .....+.++..++.++.+++++||+.+|++||++.++++
T Consensus 186 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~---- 261 (265)
T cd06631 186 GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR---- 261 (265)
T ss_pred cchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc----
Confidence 57899999999999999999999753211111 112345567788999999999999999999999999999
Q ss_pred hhhcCCccc
Q psy4039 509 YLWAPKHWL 517 (588)
Q Consensus 509 ~~~~~h~w~ 517 (588)
|||+
T Consensus 262 -----~~~~ 265 (265)
T cd06631 262 -----HDFL 265 (265)
T ss_pred -----CCCC
Confidence 9996
No 150
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-38 Score=321.07 Aligned_cols=248 Identities=22% Similarity=0.267 Sum_probs=196.4
Q ss_pred ccCCeEEeeeecccCceeEEEEEECC-eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFRG-VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~g-~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+.++|++.+.||+|+||.||.|.+.+ ..||||.+..... ....+.+|+.+++.+ +||
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~------------------~~~~~~~e~~~l~~l----~h~ 59 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------------------SEDEFIEEAKVMMKL----SHE 59 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc------------------cHHHHHHHHHHHhcC----CCC
Confidence 45789999999999999999998874 4699999853211 123456788888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..+++|||+ +|+|.+++......+++.+++.++.|++.
T Consensus 60 ~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 60 KLVQLYGVCTKQR----------------------------PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred CeeeEEEEEccCC----------------------------CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 9999999987632 279999999 57999999876557999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+.||+|+||||+||+++.+ +.+||+|||+++........ ......++..|+|||++.+..
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~-----~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~----- 177 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ-----GCVKVSDFGLSRYVLDDEYT----SSVGSKFPVRWSPPEVLLYSK----- 177 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC-----CCEEECCCccceecCCCcee----ecCCCccChhhCCHHHHhcCc-----
Confidence 9999999999999999999999987 78999999998765432111 111234667899999997554
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
++.++|||||||++|||++ |..||....... .......+..+...++.+++++.+||+.||.+||++.+++..+
T Consensus 178 -~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 178 -FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred -ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 4578999999999999998 999986532111 1112223334456789999999999999999999999998754
No 151
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.5e-39 Score=325.45 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=197.6
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|.+..++|++.+.||+|+||.||+|.+. +..||||++...... .....+.+|+.+++
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~----------------~~~~~~~~e~~~l~ 64 (277)
T cd05062 1 WEVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM----------------RERIEFLNEASVMK 64 (277)
T ss_pred CcccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH----------------HHHHHHHHHHHHHH
Confidence 3455688999999999999999999875 357999997421100 01223567888888
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
.+ +||||+++++++.+.. ..++||||+ +++|.+++....
T Consensus 65 ~l----~~~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 112 (277)
T cd05062 65 EF----NCHHVVRLLGVVSQGQ----------------------------PTLVIMELMTRGDLKSYLRSLRPEMENNPV 112 (277)
T ss_pred hC----CCCCeeeEEEEEcCCC----------------------------CeEEEEecCCCCCHHHHHHHcCcccccccc
Confidence 87 9999999999886532 389999999 689999997632
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCC
Q psy4039 335 -AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 413 (588)
Q Consensus 335 -~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT 413 (588)
..+++..+..++.|+++||.|||+.+++||||||+||+++++ +.++|+|||+++.......... .....++
T Consensus 113 ~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~ 184 (277)
T cd05062 113 QAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED-----FTVKIGDFGMTRDIYETDYYRK---GGKGLLP 184 (277)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC-----CCEEECCCCCccccCCcceeec---CCCCccC
Confidence 136788999999999999999999999999999999999987 7899999999976543221110 1123467
Q ss_pred ccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhh
Q psy4039 414 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 414 ~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
+.|||||++.+.. .+.++|||||||++|||++ |..||.+....... .....+..+..+++.+++++.+||
T Consensus 185 ~~y~aPE~~~~~~------~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (277)
T cd05062 185 VRWMSPESLKDGV------FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCW 258 (277)
T ss_pred HhhcChhHhhcCC------cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 8999999987654 4578999999999999998 78898764322111 122334456778999999999999
Q ss_pred hhCCCCCCCHHHHHHHHh
Q psy4039 490 ENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~ 507 (588)
+.||++|||+.++++.++
T Consensus 259 ~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 259 QYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCChhhCcCHHHHHHHhh
Confidence 999999999999988654
No 152
>KOG0607|consensus
Probab=100.00 E-value=4.9e-40 Score=323.08 Aligned_cols=262 Identities=21% Similarity=0.323 Sum_probs=205.5
Q ss_pred eEE-eeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 198 IQI-GKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 198 ~~~-~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
|++ .+.||+|+|+.|--|+.. |.+||||+|.+..- -.+.++-+|++++..+ ..|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-----------------HsR~RvfREVe~f~~C---qgh~ni 138 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-----------------HSRSRVFREVETFYQC---QGHKNI 138 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc-----------------hHHHHHHHHHHHHHHh---cCCccH
Confidence 444 367999999999988775 89999999964311 1334556799999888 589999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
++|+++|+++. .+|+|||.+ +|+|...|.++. .+++.++..+.++|+.||
T Consensus 139 lqLiefFEdd~----------------------------~FYLVfEKm~GGplLshI~~~~-~F~E~EAs~vvkdia~aL 189 (463)
T KOG0607|consen 139 LQLIEFFEDDT----------------------------RFYLVFEKMRGGPLLSHIQKRK-HFNEREASRVVKDIASAL 189 (463)
T ss_pred HHHHHHhcccc----------------------------eEEEEEecccCchHHHHHHHhh-hccHHHHHHHHHHHHHHH
Confidence 99999999854 499999999 689999998775 899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC--CCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS--GLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~--~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
.|||.+||.||||||+|||-.+. +.-.-+|||||.+...... ......+....+.+|+..|||||+..--.+.-+
T Consensus 190 dFlH~kgIAHRDlKPENiLC~~p--n~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~- 266 (463)
T KOG0607|consen 190 DFLHTKGIAHRDLKPENILCESP--NKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQAT- 266 (463)
T ss_pred HHHhhcCcccccCCccceeecCC--CCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccc-
Confidence 99999999999999999999754 3335799999998876443 222223444567899999999999763322211
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccc-----------------------ccccccccccCCCCCCccHHHHHHHHHh
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSA-----------------------RNTDYEVNALPQLNTNVPEVMRRLVAKL 488 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~Li~~~ 488 (588)
.|..+||.||+|||+|-|++|.+||.+.. ....|+. ...-|..++.+++||++.+
T Consensus 267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeF--PdkdWahIS~eakdlisnL 344 (463)
T KOG0607|consen 267 FYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEF--PDKDWAHISSEAKDLISNL 344 (463)
T ss_pred cccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcC--ChhhhHHhhHHHHHHHHHH
Confidence 24567999999999999999999997621 1111111 1122456899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 489 LENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 489 L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
|..|+.+|.++.++++ |||++...+
T Consensus 345 lvrda~~rlsa~~vln---------hPw~~~~~~ 369 (463)
T KOG0607|consen 345 LVRDAKQRLSAAQVLN---------HPWVQRCAP 369 (463)
T ss_pred HhccHHhhhhhhhccC---------Cccccccch
Confidence 9999999999999888 999985444
No 153
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-38 Score=326.88 Aligned_cols=264 Identities=21% Similarity=0.238 Sum_probs=203.4
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|++..++|++.+.||+|+||.||+|.++ +..||||.+..... .. ....+.+|+.+++
T Consensus 1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~--------------~~~~~~~e~~~l~ 64 (288)
T cd05061 1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LR--------------ERIEFLNEASVMK 64 (288)
T ss_pred CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HH--------------HHHHHHHHHHHHH
Confidence 5666789999999999999999999764 45899998742110 00 1123456888888
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
.+ +||||+++++++.+.. ..+++|||+ +|+|.+++....
T Consensus 65 ~l----~~~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~ 112 (288)
T cd05061 65 GF----TCHHVVRLLGVVSKGQ----------------------------PTLVVMELMAHGDLKSYLRSLRPEAENNPG 112 (288)
T ss_pred hC----CCCCeeeEEEEEcCCC----------------------------CcEEEEeCCCCCCHHHHHHHhccccccCCC
Confidence 87 8999999999886532 389999999 689999997531
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCC
Q psy4039 335 -AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 413 (588)
Q Consensus 335 -~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT 413 (588)
..+++..+..++.|++.||.|||+++|+||||||+|||++.+ +.++|+|||+++......... ......++
T Consensus 113 ~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~-----~~~~L~Dfg~~~~~~~~~~~~---~~~~~~~~ 184 (288)
T cd05061 113 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD-----FTVKIGDFGMTRDIYETDYYR---KGGKGLLP 184 (288)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC-----CcEEECcCCcccccccccccc---ccCCCccc
Confidence 235677889999999999999999999999999999999987 789999999998654321111 11123457
Q ss_pred ccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhh
Q psy4039 414 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 414 ~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
..|+|||.+.+.. .+.++|||||||++|||++ |..||.+....... .....+..+..+++.+++++.+||
T Consensus 185 ~~y~~pE~~~~~~------~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (288)
T cd05061 185 VRWMAPESLKDGV------FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCW 258 (288)
T ss_pred ccccCHHHhccCC------CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHc
Confidence 7899999987654 4578999999999999998 78898653221111 112233455677899999999999
Q ss_pred hhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 490 ENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+.||++|||+.++++.++..+ |||+.+
T Consensus 259 ~~~p~~Rps~~~ll~~l~~~~---~~~~~~ 285 (288)
T cd05061 259 QFNPKMRPTFLEIVNLLKDDL---HPSFPE 285 (288)
T ss_pred CCChhHCcCHHHHHHHHHhhc---CCCCCC
Confidence 999999999999999887665 888763
No 154
>KOG0196|consensus
Probab=100.00 E-value=2.7e-40 Score=355.82 Aligned_cols=270 Identities=21% Similarity=0.326 Sum_probs=228.7
Q ss_pred ccCCCccccccCCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHH
Q psy4039 185 ETLPDVDDVKVDDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNED 259 (588)
Q Consensus 185 ~~~~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei 259 (588)
+...+..+++.....+.++||.|.||.||+|+++ ...||||.++... ....+.+|..|.
T Consensus 618 AvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy----------------tekqrrdFL~EA 681 (996)
T KOG0196|consen 618 AVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY----------------TEKQRRDFLSEA 681 (996)
T ss_pred HHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc----------------cHHHHhhhhhhh
Confidence 3345677899999999999999999999999998 5689999995322 122567889999
Q ss_pred HHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCC
Q psy4039 260 MLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLS 338 (588)
Q Consensus 260 ~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~ 338 (588)
.||.++ .||||++|.|+.+...| +.||.||| ||+|+.||+.+..+++
T Consensus 682 sIMGQF----dHPNIIrLEGVVTks~P----------------------------vMIiTEyMENGsLDsFLR~~DGqft 729 (996)
T KOG0196|consen 682 SIMGQF----DHPNIIRLEGVVTKSKP----------------------------VMIITEYMENGSLDSFLRQNDGQFT 729 (996)
T ss_pred hhcccC----CCCcEEEEEEEEecCce----------------------------eEEEhhhhhCCcHHHHHhhcCCceE
Confidence 999998 99999999999987554 89999999 8999999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccC--Cccc
Q psy4039 339 MHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG--NVAL 416 (588)
Q Consensus 339 ~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~G--T~~Y 416 (588)
..+...++++|+.|+.||-+.+.|||||.++|||++.+ ..+|++|||++|.+.++....++ +.+| .+.|
T Consensus 730 viQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn-----LvCKVsDFGLSRvledd~~~~yt----t~GGKIPiRW 800 (996)
T KOG0196|consen 730 VIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN-----LVCKVSDFGLSRVLEDDPEAAYT----TLGGKIPIRW 800 (996)
T ss_pred eehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc-----eEEEeccccceeecccCCCcccc----ccCCccceee
Confidence 99999999999999999999999999999999999998 89999999999988765433333 3344 4589
Q ss_pred cchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhC
Q psy4039 417 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLEND 492 (588)
Q Consensus 417 ~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~d 492 (588)
.|||.+.... .+.+||||||||+|||.++ |..||++...+.. ++...+-+-|-+||..+..||..||++|
T Consensus 801 TAPEAIa~RK------FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkd 874 (996)
T KOG0196|consen 801 TAPEAIAYRK------FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKD 874 (996)
T ss_pred cChhHhhhcc------cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH
Confidence 9999997665 5588999999999999885 9999988544333 2334444557899999999999999999
Q ss_pred CCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 493 PSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 493 P~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
...||.++|+++.|..+...|+.-.
T Consensus 875 R~~RP~F~qiV~~lDklIrnP~SLk 899 (996)
T KOG0196|consen 875 RNRRPKFAQIVSTLDKLIRNPNSLK 899 (996)
T ss_pred hhcCCCHHHHHHHHHHHhcCchhhc
Confidence 9999999999999999887766543
No 155
>KOG0577|consensus
Probab=100.00 E-value=3.2e-40 Score=345.15 Aligned_cols=256 Identities=24% Similarity=0.304 Sum_probs=209.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
-|.-...||.|+||.||-|++. ...||||+|.=...+++. .-+++..|+.+|+.+ +|||+
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~E--------------KWqDIlKEVrFL~~l----~HPnt 88 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------------KWQDILKEVRFLRQL----RHPNT 88 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHH--------------HHHHHHHHHHHHHhc----cCCCc
Confidence 3566678999999999999987 678999999422222111 335667799999998 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
|.+-|||-.. .+.|+|||||-||-.+++.-...++-+.++..|+.+.+.||+
T Consensus 89 ieYkgCyLre----------------------------~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLa 140 (948)
T KOG0577|consen 89 IEYKGCYLRE----------------------------HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 140 (948)
T ss_pred ccccceeecc----------------------------chHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999998753 248999999988888888877669999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+.+.||||||+.|||+.+. +.|||+|||.|..... ...++|||.|||||++..-... .|+
T Consensus 141 YLHS~~~IHRDiKAGNILLse~-----g~VKLaDFGSAsi~~P---------AnsFvGTPywMAPEVILAMDEG---qYd 203 (948)
T KOG0577|consen 141 YLHSHNRIHRDIKAGNILLSEP-----GLVKLADFGSASIMAP---------ANSFVGTPYWMAPEVILAMDEG---QYD 203 (948)
T ss_pred HHHHhhHHhhhccccceEecCC-----CeeeeccccchhhcCc---------hhcccCCccccchhHheecccc---ccC
Confidence 9999999999999999999988 8999999999866433 1268999999999999754321 256
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccc-c--cccccCCCC-CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD-Y--EVNALPQLN-TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-~--~~~~~~~~~-~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
-|+||||+|++..||.-.++|+++...... | .....|.+. ..++..++.+|..||++-|.+|||.++++.
T Consensus 204 gkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~------ 277 (948)
T KOG0577|consen 204 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK------ 277 (948)
T ss_pred CccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh------
Confidence 799999999999999999999887533221 1 223334443 467899999999999999999999999999
Q ss_pred hcCCccccCCCCCh
Q psy4039 511 WAPKHWLYGATPSH 524 (588)
Q Consensus 511 ~~~h~w~~~~~~~~ 524 (588)
|+|+....|..
T Consensus 278 ---H~fv~R~Rp~t 288 (948)
T KOG0577|consen 278 ---HRFVLRERPPT 288 (948)
T ss_pred ---cchhccCCCch
Confidence 99998777654
No 156
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.3e-38 Score=321.94 Aligned_cols=253 Identities=21% Similarity=0.310 Sum_probs=199.3
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
..++|++.+.||+|+||+||+|.+. ...||||.++.... . .....+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~---~-------------~~~~~~~~e~~~l~~l--- 62 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS---D-------------KQRLDFLTEASIMGQF--- 62 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC---h-------------HHHHHHHHHHHHHHhC---
Confidence 3478999999999999999999985 34799999853211 0 0223456788888887
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++......+++.++..++.
T Consensus 63 -~h~~i~~~~~~~~~~~----------------------------~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 113 (266)
T cd05033 63 -DHPNIIRLEGVVTKSR----------------------------PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLR 113 (266)
T ss_pred -CCCCcceEeEEEecCC----------------------------ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 8999999999886532 389999999 5799999987655899999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+|||++++ +.++|+|||+++........ ... ....+++.|+|||.+.+..
T Consensus 114 ~l~~~l~~Lh~~~i~H~di~p~nili~~~-----~~~~l~dfg~~~~~~~~~~~-~~~--~~~~~~~~y~~Pe~~~~~~- 184 (266)
T cd05033 114 GIASGMKYLSEMNYVHRDLAARNILVNSN-----LVCKVSDFGLSRRLEDSEAT-YTT--KGGKIPIRWTAPEAIAYRK- 184 (266)
T ss_pred HHHHHHHHHHhCCcccCCCCcceEEEcCC-----CCEEECccchhhcccccccc-eec--cCCCCCccccChhhhccCC-
Confidence 99999999999999999999999999987 78999999999876521111 111 1233567899999987654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++||||||+++|||++ |..||........ .......+.+..+|+.+.+++.+||+.+|++||++++++
T Consensus 185 -----~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~ 259 (266)
T cd05033 185 -----FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIV 259 (266)
T ss_pred -----CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 4578999999999999998 9999965322111 111122234567899999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 260 ~~l~~ 264 (266)
T cd05033 260 STLDK 264 (266)
T ss_pred HHHHh
Confidence 98764
No 157
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.9e-38 Score=325.01 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=195.9
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+++|++.+.||+|+||.||+|..+ ++.||||.+...... .....+.+|+.+++.+ +||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h~ 63 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE----------------GAPFTAIREASLLKDL----KHA 63 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc----------------CCchhHHHHHHHHhhC----CCc
Confidence 488999999999999999999986 789999998532111 0112345699999987 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.+.. ..++||||+.++|.+++......+++..+..++.|+++|
T Consensus 64 ~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~a 115 (291)
T cd07844 64 NIVTLHDIIHTKK----------------------------TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRG 115 (291)
T ss_pred ceeeEEEEEecCC----------------------------eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 9999999987632 489999999889999998765578999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.+||+|||+++........ .....++..|+|||++.+...
T Consensus 116 l~~lH~~~i~H~dl~p~nil~~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~----- 180 (291)
T cd07844 116 LAYCHQRRVLHRDLKPQNLLISER-----GELKLADFGLARAKSVPSKT-----YSNEVVTLWYRPPDVLLGSTE----- 180 (291)
T ss_pred HHHHHhCCeecccCCHHHEEEcCC-----CCEEECccccccccCCCCcc-----ccccccccccCCcHHhhcCcc-----
Confidence 999999999999999999999987 78999999998754321110 012346889999999865321
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccc----------------cc---------ccccc-----C---CCCCCcc-
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----------------DY---------EVNAL-----P---QLNTNVP- 478 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~----------------~~---------~~~~~-----~---~~~~~~~- 478 (588)
++.++||||+||++|||++|+.||....... .+ ..... . .....++
T Consensus 181 ~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (291)
T cd07844 181 YSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDR 260 (291)
T ss_pred cCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCC
Confidence 3468999999999999999999996432000 00 00000 0 0011233
Q ss_pred -HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 479 -EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 479 -~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.++.+++.+||+.||++|||++++++ ||||
T Consensus 261 ~~~~~~li~~~L~~~p~~Rps~~e~l~---------~~~f 291 (291)
T cd07844 261 IPHGEELALKFLQYEPKKRISAAEAMK---------HPYF 291 (291)
T ss_pred chhHHHHHHHHhccCcccccCHHHHhc---------CCCC
Confidence 78899999999999999999999999 9996
No 158
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.9e-38 Score=318.96 Aligned_cols=248 Identities=22% Similarity=0.260 Sum_probs=199.1
Q ss_pred cccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
|.+..++|++.+.||+|+||.||++...+..||+|.+.... ..+.+.+|+.+++.+ +
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~-------------------~~~~~~~e~~~l~~l----~ 57 (256)
T cd05082 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-------------------TAQAFLAEASVMTQL----R 57 (256)
T ss_pred CCccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc-------------------hHHHHHHHHHHHHhC----C
Confidence 45667899999999999999999999999999999984211 123456788888887 8
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQ 348 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~q 348 (588)
|+||+++++++.... ...+++|||+ +++|.+++.... ..+++..+..++.|
T Consensus 58 ~~~i~~~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 110 (256)
T cd05082 58 HSNLVQLLGVIVEEK---------------------------GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110 (256)
T ss_pred CCCeeeEEEEEEcCC---------------------------CceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 999999998765421 1389999999 579999998753 34899999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||+|||++||+||||||+||+++.+ +.+||+|||+++....... ...++..|+|||++.+..
T Consensus 111 i~~~l~~lH~~~i~H~dlkp~nil~~~~-----~~~kl~dfg~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~-- 175 (256)
T cd05082 111 VCEAMEYLEANNFVHRDLAARNVLVSED-----NVAKVSDFGLTKEASSTQD--------TGKLPVKWTAPEALREKK-- 175 (256)
T ss_pred HHHHHHHHHhCCEeccccchheEEEcCC-----CcEEecCCccceeccccCC--------CCccceeecCHHHHccCC--
Confidence 9999999999999999999999999987 7899999999876433111 233567899999986654
Q ss_pred ccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++|||||||++|||++ |+.||........ ......+..+..+|+.+.+++.+||+.||++|||++++++
T Consensus 176 ----~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 176 ----FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ----CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 4568999999999999997 9999865322111 1112233455678999999999999999999999999988
Q ss_pred HHh
Q psy4039 505 VCQ 507 (588)
Q Consensus 505 ~L~ 507 (588)
.|+
T Consensus 252 ~l~ 254 (256)
T cd05082 252 QLE 254 (256)
T ss_pred HHh
Confidence 665
No 159
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.4e-38 Score=324.58 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=197.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..||||++...... .....+.+|+.+++.+ +|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h~~ 60 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV----------------ELQKQIMSELEILYKC----DSPY 60 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh----------------HHHHHHHHHHHHHHhC----CCCC
Confidence 46788899999999999999985 789999998532100 0123466788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..+++|||+ +++|..+. .+++..+..++.|++.|
T Consensus 61 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~ 107 (279)
T cd06619 61 IIGFYGAFFVEN----------------------------RISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKG 107 (279)
T ss_pred eeeEEEEEEECC----------------------------EEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHH
Confidence 999999988732 488999999 56776542 67899999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+|+||||+|||++.+ +.++|+|||++....... .....||..|+|||++.+..
T Consensus 108 l~~lH~~~i~H~dlkp~Nill~~~-----~~~~l~dfg~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~------ 169 (279)
T cd06619 108 LTYLWSLKILHRDVKPSNMLVNTR-----GQVKLCDFGVSTQLVNSI-------AKTYVGTNAYMAPERISGEQ------ 169 (279)
T ss_pred HHHHHHCCEeeCCCCHHHEEECCC-----CCEEEeeCCcceeccccc-------ccCCCCChhhcCceeecCCC------
Confidence 999999999999999999999987 899999999997654321 11457899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc-------cc---ccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-------YE---VNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-------~~---~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
.+.++|||||||++|+|++|..||........ .. ....+.. ....++++++++.+||+.||++||++++
T Consensus 170 ~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~e 249 (279)
T cd06619 170 YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPEN 249 (279)
T ss_pred CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHH
Confidence 45789999999999999999999965221110 00 0111111 2347789999999999999999999999
Q ss_pred HHHHHhhhhhcCCccccCCCCChhHH
Q psy4039 502 AATVCQLYLWAPKHWLYGATPSHNEI 527 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~~~~~~~~~~~ 527 (588)
+++ |||+........++
T Consensus 250 il~---------~~~~~~~~~~~~~~ 266 (279)
T cd06619 250 LMD---------HPFIVQYNDGNAEV 266 (279)
T ss_pred Hhc---------CcccccccCccHHH
Confidence 999 99998554443333
No 160
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.8e-38 Score=317.14 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=199.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|++|.||++.+. ++.||||.+....... ...+.+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i 61 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR---------------RERKAAEQEAQLLSQL----KHPNI 61 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH---------------HHHHHHHHHHHHHHhC----CCCCe
Confidence 5899999999999999999986 6789999985322110 0123355688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++.+... ...++++|||+ +++|.+++... ...+++.++..++.|++.|
T Consensus 62 ~~~~~~~~~~---------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~ 114 (257)
T cd08223 62 VAYRESWEGE---------------------------DGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMA 114 (257)
T ss_pred eeeeeeecCC---------------------------CCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 9998876532 12489999999 57999999874 3468999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|+|||++||+||||||+||+++.+ +.++|+|||++........ ......|++.|+|||++.+..
T Consensus 115 l~~lH~~~i~H~di~p~nil~~~~-----~~~~l~df~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------ 178 (257)
T cd08223 115 LQYLHEKHILHRDLKTQNVFLTRT-----NIIKVGDLGIARVLENQCD-----MASTLIGTPYYMSPELFSNKP------ 178 (257)
T ss_pred HHHHHhCCeeccCCCchhEEEecC-----CcEEEecccceEEecccCC-----ccccccCCcCccChhHhcCCC------
Confidence 999999999999999999999887 7899999999987543211 112456899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|+|++|+.||........ ......+..+..+++++.+++.+||+.||++||++.++++
T Consensus 179 ~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~----- 253 (257)
T cd08223 179 YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR----- 253 (257)
T ss_pred CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc-----
Confidence 45789999999999999999999975322111 1122334456678899999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 254 ----~~~~ 257 (257)
T cd08223 254 ----QPYI 257 (257)
T ss_pred ----CCCC
Confidence 9996
No 161
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.5e-38 Score=325.77 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=198.7
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|+..+.||+|+||+||+|.+. ++.||+|.+........ .....+.+|+.+++.+ +|+||+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~E~~il~~l----~~~~i~ 63 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR--------------KGESMALNEKQILEKV----NSQFVV 63 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhh--------------hHHHHHHHHHHHHHHc----CCcCce
Confidence 677889999999999999996 78999999853211100 0123356689999887 999999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL 353 (588)
++++++.+.. ..+++|||+ +++|.+++.... ..+++..+..++.|++.||
T Consensus 64 ~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l 115 (285)
T cd05632 64 NLAYAYETKD----------------------------ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGL 115 (285)
T ss_pred eEEEEEecCC----------------------------EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 9998887632 489999999 579998887643 3699999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+||+++++ +.++|+|||++........ .....||+.|+|||++.+.. +
T Consensus 116 ~~lH~~~iiH~dikp~Nili~~~-----~~~kl~Dfg~~~~~~~~~~------~~~~~g~~~~~aPE~~~~~~------~ 178 (285)
T cd05632 116 EDLHRENTVYRDLKPENILLDDY-----GHIRISDLGLAVKIPEGES------IRGRVGTVGYMAPEVLNNQR------Y 178 (285)
T ss_pred HHHHhCCeeecCCCHHHEEECCC-----CCEEEecCCcceecCCCCc------ccCCCCCcCccChHHhcCCC------C
Confidence 99999999999999999999987 7899999999876533211 11356899999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc---c---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---Y---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AELA 502 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e~ 502 (588)
+.++|||||||++|||++|..||........ . ........+..+++++.+|+.+||+.||++||+ ++++
T Consensus 179 ~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l 258 (285)
T cd05632 179 TLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEV 258 (285)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHH
Confidence 5789999999999999999999976322110 0 011122345678899999999999999999999 7888
Q ss_pred HHHHhhhhhcCCccccCC
Q psy4039 503 ATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~~~ 520 (588)
++ |+|+...
T Consensus 259 ~~---------~~~~~~~ 267 (285)
T cd05632 259 KR---------HPFFRNM 267 (285)
T ss_pred Hc---------ChhhhcC
Confidence 88 9999754
No 162
>KOG0586|consensus
Probab=100.00 E-value=5.4e-39 Score=340.71 Aligned_cols=258 Identities=26% Similarity=0.319 Sum_probs=215.9
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
.......|.+.+.||+|.|++|..|++. +..||||.+.+...... ..+.+-+|+++|..+
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~---------------~~~k~~rev~imk~l--- 112 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS---------------KRQKLGREVDIMKSL--- 112 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH---------------HHHHHHHHHHHHHhc---
Confidence 3445588999999999999999999997 89999999965332211 122256799999987
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+|||||+++.+...+. .+|+||||+ +|.+++||...+ ...+..+..++.
T Consensus 113 -~HPnIvkl~~v~~t~~----------------------------~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~ 162 (596)
T KOG0586|consen 113 -NHPNIVKLFSVIETEA----------------------------TLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFR 162 (596)
T ss_pred -CCcceeeeeeeeeecc----------------------------eeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhH
Confidence 9999999999988643 499999999 799999999876 777799999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|+.+|++|||+++|||||||++||||+.+ .++||+|||++..+..+.... +.||++.|.|||++.+..+
T Consensus 163 q~vsaveYcH~k~ivHrdLk~eNilL~~~-----mnikIaDfgfS~~~~~~~~lq------t~cgsppyAaPEl~~g~~y 231 (596)
T KOG0586|consen 163 QIVSAVEYCHSKNIVHRDLKAENILLDEN-----MNIKIADFGFSTFFDYGLMLQ------TFCGSPPYAAPELFNGKKY 231 (596)
T ss_pred HHHHHHHHHhhcceeccccchhhcccccc-----cceeeeccccceeeccccccc------ccCCCCCccChHhhcCccc
Confidence 99999999999999999999999999998 789999999998877544332 6789999999999998874
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
.++.+|+||+|+++|-|++|..||.+......-. ......++..++.++.+||+++|..+|.+|++++++..
T Consensus 232 -----~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~- 305 (596)
T KOG0586|consen 232 -----DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK- 305 (596)
T ss_pred -----CCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh-
Confidence 5688999999999999999999999853322211 12233466778899999999999999999999999999
Q ss_pred HhhhhhcCCccccCCC
Q psy4039 506 CQLYLWAPKHWLYGAT 521 (588)
Q Consensus 506 L~~~~~~~h~w~~~~~ 521 (588)
|.|+....
T Consensus 306 --------~~W~n~~~ 313 (596)
T KOG0586|consen 306 --------DRWRNDLL 313 (596)
T ss_pred --------hcccchhh
Confidence 99987443
No 163
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.4e-39 Score=324.82 Aligned_cols=247 Identities=30% Similarity=0.430 Sum_probs=193.9
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++++.||+|+||+||++... ++.||+|++........ ......+|+.+++.+ +||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~---------------~~~~~~~e~~~~~~l----~~~~i~ 61 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE---------------EREENIREIKILRRL----RHPNIV 61 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH---------------HHHHHHHHHHHHHHH----TBTTBC
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc---------------ccchhhhhhhccccc----cccccc
Confidence 788999999999999999998 66899999964321111 111123388899988 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+.. ..+++||++.+ +|.+++.... .+++.++..++.|+++||.
T Consensus 62 ~~~~~~~~~~----------------------------~~~~v~~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~ 112 (260)
T PF00069_consen 62 QILDVFQDDN----------------------------YLYIVMEYCPGGSLQDYLQKNK-PLSEEEILKIAYQILEALA 112 (260)
T ss_dssp HEEEEEEESS----------------------------EEEEEEEEETTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHH
T ss_pred cccccccccc----------------------------cccccccccccccccccccccc-ccccccccccccccccccc
Confidence 9999988732 48999999965 9999998443 8999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHh-cCCCCccCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL-ATPGLFSFVN 433 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~~~~ 433 (588)
|||+++|+||||||+||+++.+ +.++|+|||.+....... .......||..|+|||++. +.. .
T Consensus 113 ~Lh~~~i~H~dikp~NIl~~~~-----~~~~l~Dfg~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~------~ 176 (260)
T PF00069_consen 113 YLHSKGIVHRDIKPENILLDEN-----GEVKLIDFGSSVKLSENN-----ENFNPFVGTPEYMAPEVLQQGKK------Y 176 (260)
T ss_dssp HHHHTTEEESSBSGGGEEESTT-----SEEEESSGTTTEESTSTT-----SEBSSSSSSGGGSCHHHHTTTSS------B
T ss_pred cccccccccccccccccccccc-----cccccccccccccccccc-----ccccccccccccccccccccccc------c
Confidence 9999999999999999999977 789999999997641111 1112456899999999987 332 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccc---ccccccc------cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSA---RNTDYEV------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~---~~~~~~~------~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
+.++||||+|+++|+|++|..||.... ....... ..........++++.+++.+||+.||++||+++++++
T Consensus 177 ~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 177 TRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp STHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 578999999999999999999998741 1111110 0001111223489999999999999999999999999
Q ss_pred HHhhhhhcCCccc
Q psy4039 505 VCQLYLWAPKHWL 517 (588)
Q Consensus 505 ~L~~~~~~~h~w~ 517 (588)
|||+
T Consensus 257 ---------~~~~ 260 (260)
T PF00069_consen 257 ---------HPWF 260 (260)
T ss_dssp ---------SGGG
T ss_pred ---------CCCC
Confidence 9996
No 164
>KOG1989|consensus
Probab=100.00 E-value=1.3e-38 Score=350.75 Aligned_cols=273 Identities=23% Similarity=0.284 Sum_probs=204.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
-++++.+.|.+|||+.||.|.+. |.+||+|++... ++. .-+...+||.+|+.| ..|+|
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-----de~------------~L~~v~~EI~~MK~L---~gh~n 96 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-----DEE------------ALNAVKREIDIMKLL---SGHKN 96 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-----CHH------------HHHHHHHHHHHHHHh---cCCCc
Confidence 56788899999999999999997 489999999532 222 223456799999998 57999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
||.+++...... . +....-.++|+||||. |+|-+++..+ ...|++.++++|+.|+++
T Consensus 97 IV~yidss~~~~--------------------~-~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~ 155 (738)
T KOG1989|consen 97 IVSYIDSSAINR--------------------S-SNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCE 155 (738)
T ss_pred eeeEeccccccc--------------------c-CCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 999998422110 0 1111236899999995 8999999865 346999999999999999
Q ss_pred HHHHHHhCC--ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCc----cccccccccccCCccccchhHHhcC
Q psy4039 352 GVTHLNMHR--TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS----MQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 352 gL~yLH~~~--IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~----~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
|+++||... |||||||-+||||..+ ++.||||||.|...-.... ..+-...+...-|+.|.|||++.-.
T Consensus 156 AVa~mH~~~pPiIHRDLKiENvLls~~-----g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly 230 (738)
T KOG1989|consen 156 AVAAMHYLKPPIIHRDLKIENVLLSAD-----GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY 230 (738)
T ss_pred HHHHHhcCCCccchhhhhhhheEEcCC-----CCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh
Confidence 999999876 9999999999999988 8999999999865322110 1111122344579999999998633
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
.+. ..++|+|||||||+||-|+....||...-...........+....++..+++||+.||+.||++||++-|++..
T Consensus 231 sg~---pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 231 SGL---PIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred cCC---CCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 221 15689999999999999999999998752222222211112235788999999999999999999999998887
Q ss_pred HhhhhhcCCcccc
Q psy4039 506 CQLYLWAPKHWLY 518 (588)
Q Consensus 506 L~~~~~~~h~w~~ 518 (588)
+..+.-. +.|+.
T Consensus 308 ~~~l~~~-~~~~~ 319 (738)
T KOG1989|consen 308 IFELANK-PCPIP 319 (738)
T ss_pred HHHHhcC-CCCcc
Confidence 6655433 44544
No 165
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-38 Score=325.39 Aligned_cols=260 Identities=22% Similarity=0.256 Sum_probs=202.7
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
.-++|.+.+.||+|+||.||++.+. +..+|+|.+.... . .....+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~--------------~~~~~~~~e~~~l~~l- 64 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---D--------------NARKDFHREAELLTNL- 64 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---H--------------HHHHHHHHHHHHHHhC-
Confidence 3478999999999999999999863 4569999884311 0 0223456788999887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----------
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----------- 334 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----------- 334 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++....
T Consensus 65 ---~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (288)
T cd05093 65 ---QHEHIVKFYGVCVEGD----------------------------PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNR 113 (288)
T ss_pred ---CCCCcceEEEEEecCC----------------------------ccEEEEEcCCCCCHHHHHHHcCCccccccccCC
Confidence 8999999999987532 389999999 589999997542
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCC
Q psy4039 335 -AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 413 (588)
Q Consensus 335 -~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT 413 (588)
..+++.++..++.|++.||+|||++||+||||||+|||++++ +.+||+|||+++........ .......++
T Consensus 114 ~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-----~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~ 185 (288)
T cd05093 114 PAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-----LLVKIGDFGMSRDVYSTDYY---RVGGHTMLP 185 (288)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC-----CcEEeccCCccccccCCcee---ecCCCCCcc
Confidence 248999999999999999999999999999999999999987 78999999999765432111 111134467
Q ss_pred ccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhh
Q psy4039 414 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 414 ~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
+.|+|||++.+.. .+.++|||||||++|||++ |..||........ ......+..+..++.++.+++.+||
T Consensus 186 ~~y~aPE~~~~~~------~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l 259 (288)
T cd05093 186 IRWMPPESIMYRK------FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCW 259 (288)
T ss_pred ccccCHHHhccCC------CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHc
Confidence 8999999987654 4578999999999999998 8999866322111 1112223445678899999999999
Q ss_pred hhCCCCCCCHHHHHHHHhhhhhcCCcc
Q psy4039 490 ENDPSDRPSAELAATVCQLYLWAPKHW 516 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~~~~~~~h~w 516 (588)
+.||.+|||+.+++..|+.+.-....|
T Consensus 260 ~~~p~~Rpt~~~v~~~l~~~~~~~~~~ 286 (288)
T cd05093 260 QREPHMRLNIKEIHSLLQNLAKASPVY 286 (288)
T ss_pred cCChhhCCCHHHHHHHHHHHHHhcccc
Confidence 999999999999999888765544444
No 166
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.5e-38 Score=320.08 Aligned_cols=245 Identities=22% Similarity=0.240 Sum_probs=191.9
Q ss_pred eecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 203 FIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.||+|+||.||+|.++ +..||||++.... ... ...+.+.+|+.+++.+ .||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~---~~~------------~~~~~~~~e~~~l~~l----~h~~i~~~~ 62 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---NDP------------ALKDELLREANVMQQL----DNPYIVRMI 62 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC---CcH------------HHHHHHHHHHHHHHhC----CCCCcceEE
Confidence 5899999999999764 6889999985321 111 0223456688888887 999999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++.+. ..++||||+ +|+|.+++.... .+++..+..++.|++.||.|||
T Consensus 63 ~~~~~~-----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH 112 (257)
T cd05116 63 GICEAE-----------------------------SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE 112 (257)
T ss_pred EEEcCC-----------------------------CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 987542 278999999 579999997654 7999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++||+||||||+||+++.+ +.+||+|||+++......... .......+++.|+|||.+.... .+.++
T Consensus 113 ~~~i~H~dlkp~nill~~~-----~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~------~~~~~ 179 (257)
T cd05116 113 ETNFVHRDLAARNVLLVTQ-----HYAKISDFGLSKALGADENYY--KAKTHGKWPVKWYAPECMNYYK------FSSKS 179 (257)
T ss_pred HCCEeecccchhhEEEcCC-----CeEEECCCccccccCCCCCee--eecCCCCCCccccCHhHhccCC------cCchh
Confidence 9999999999999999987 789999999998754432211 1111234567999999986543 44689
Q ss_pred chhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 438 DAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 438 DVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
|||||||++|||++ |..||....... .......++.+..+|++++++|.+||+.||++||+++++...|+.+
T Consensus 180 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 180 DVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 99999999999997 999997632211 1122233456678999999999999999999999999999888754
No 167
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.8e-38 Score=318.17 Aligned_cols=260 Identities=25% Similarity=0.289 Sum_probs=202.7
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|.++..||+|+||.||+|.+. +..||+|.+............ .. ...+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~----~~----~~~~~~~~e~~~l~~l----~h~~i 68 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDR----KR----SMLDALAREIALLKEL----QHENI 68 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHH----HH----HHHHHHHHHHHHHHhc----CCCCe
Confidence 3677889999999999999985 789999998543222111000 00 0123456789999987 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..+++|||+ +++|.+++.... .+++..+..++.|++.||
T Consensus 69 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l 119 (267)
T cd06628 69 VQYLGSSLDAD----------------------------HLNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGL 119 (267)
T ss_pred eeEEEEEEeCC----------------------------ccEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHH
Confidence 99999987632 488999999 579999998754 789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc-ccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM-QYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
.|||++|++||||||+||+++++ +.++|+|||+++........ ..........|++.|+|||.+.+..
T Consensus 120 ~~lH~~~ivH~di~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~------ 188 (267)
T cd06628 120 NYLHNRGIIHRDIKGANILVDNK-----GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTS------ 188 (267)
T ss_pred HHHHhcCcccccCCHHHEEEcCC-----CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCC------
Confidence 99999999999999999999877 78999999999876532111 1111112356899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++||||+||++|+|++|..||........+ .....+.++..++.++.++|.+||+.||.+||+++++++
T Consensus 189 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~----- 263 (267)
T cd06628 189 YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK----- 263 (267)
T ss_pred CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh-----
Confidence 346799999999999999999999764222111 123345566788999999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 264 ----~~~~ 267 (267)
T cd06628 264 ----HPFL 267 (267)
T ss_pred ----CCCC
Confidence 9996
No 168
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.2e-38 Score=325.24 Aligned_cols=251 Identities=25% Similarity=0.318 Sum_probs=201.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|++.+.||+|+||.||+|.+. +..||+|.+...... ....+.+|+.+++.+ .|||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-----------------~~~~~~~e~~~l~~~----~h~~ 78 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----------------KKELIINEILVMREN----KNPN 78 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-----------------hHHHHHHHHHHHHhC----CCCC
Confidence 78999999999999999999875 789999998532211 123456688888876 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++.+.+.. ..++||||+ +++|.+++... .+++.++..++.|++.|
T Consensus 79 v~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~a 128 (296)
T cd06654 79 IVNYLDSYLVGD----------------------------ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQA 128 (296)
T ss_pred EeeEEEEEEeCC----------------------------EEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHH
Confidence 999999887631 489999999 68999998764 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+||||||+|||++.+ +.++|+|||++........ ......|++.|+|||.+.+..
T Consensus 129 L~~LH~~gi~H~dLkp~Nill~~~-----~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------ 192 (296)
T cd06654 129 LEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFCAQITPEQS-----KRSTMVGTPYWMAPEVVTRKA------ 192 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEEcCC-----CCEEECccccchhcccccc-----ccCcccCCccccCHHHHcCCC------
Confidence 999999999999999999999887 7899999999876433211 111346899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc---ccc--cCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNA--LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~--~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|+|++|+.||.......... ... ....+..++..+.+++.+||..||++||+++++++
T Consensus 193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~--- 269 (296)
T cd06654 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ--- 269 (296)
T ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh---
Confidence 4578999999999999999999997643211110 011 11234567889999999999999999999999999
Q ss_pred hhhhcCCccccCCCC
Q psy4039 508 LYLWAPKHWLYGATP 522 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~ 522 (588)
|||+....+
T Consensus 270 ------~~~~~~~~~ 278 (296)
T cd06654 270 ------HQFLKIAKP 278 (296)
T ss_pred ------ChhhhccCC
Confidence 999974433
No 169
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=362.92 Aligned_cols=265 Identities=23% Similarity=0.287 Sum_probs=203.0
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
..+..+++|.+.+.||+|+||+||+|.+. +..||+|.+........ ....+..|+.+++.+
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~---------------~~~~~~~EI~IL~~L-- 69 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKER---------------EKSQLVIEVNVMREL-- 69 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHH---------------HHHHHHHHHHHHHHc--
Confidence 34455689999999999999999999997 67899999853221110 123456799999998
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERV 343 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~ 343 (588)
+|||||+++++|.+.. +..+|+||||+ +|+|.++|... ...+++..++
T Consensus 70 --~HPNIVrl~d~f~de~--------------------------~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il 121 (1021)
T PTZ00266 70 --KHKNIVRYIDRFLNKA--------------------------NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIV 121 (1021)
T ss_pred --CCCCcCeEEEEEEecC--------------------------CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHH
Confidence 9999999999886532 22589999999 58999999763 2479999999
Q ss_pred HHHHHHHHHHHHHHhC-------CceeccCCCCcEEEcCCCC------------CCCCceeeeccccccccCCCCccccc
Q psy4039 344 LLFTQLLEGVTHLNMH-------RTAHRDLKSDNILLDCSED------------NTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~-------~IvHrDLKp~NILld~~~~------------~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
.|+.||+.||.|||+. +||||||||+||||+.+.. +....+||+|||+++.......
T Consensus 122 ~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---- 197 (1021)
T PTZ00266 122 DITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---- 197 (1021)
T ss_pred HHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc----
Confidence 9999999999999984 5999999999999975311 1125689999999976543211
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCC-CCccHHH
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLN-TNVPEVM 481 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~-~~~~~~l 481 (588)
.....||+.|+|||++.+.... ++.++||||||||+|||++|..||.......... ....+.++ ...+.++
T Consensus 198 --~~s~vGTp~YmAPEvL~ge~~~----~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL 271 (1021)
T PTZ00266 198 --AHSCVGTPYYWSPELLLHETKS----YDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKEL 271 (1021)
T ss_pred --ccccCCCccccCHHHHhccCCC----CCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHH
Confidence 1245699999999999754332 4578999999999999999999997532211111 11112222 3568899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.+||..||+.+|.+||++.+++. |+|++
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~---------h~~ik 299 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLG---------YQIIK 299 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhc---------cHHHh
Confidence 99999999999999999999988 77776
No 170
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-38 Score=325.02 Aligned_cols=253 Identities=26% Similarity=0.309 Sum_probs=202.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|... +..||||.+...... ..+.+.+|+.+++.+ +|||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----------------~~~~~~~e~~~l~~~----~h~~ 77 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-----------------KKELIINEILVMREN----KNPN 77 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-----------------hHHHHHHHHHHHHhC----CCCC
Confidence 78999999999999999999975 889999998532111 123356688888876 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.... ..++||||+ +++|.+++... .+++.++..++.|++.|
T Consensus 78 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~ 127 (297)
T cd06656 78 IVNYLDSYLVGD----------------------------ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQA 127 (297)
T ss_pred EeeEEEEEecCC----------------------------EEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHH
Confidence 999999987631 489999999 68999998765 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+||||||+|||++.+ +.++|+|||++......... .....|++.|+|||.+.+..
T Consensus 128 L~~LH~~~i~H~dL~p~Nili~~~-----~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~------ 191 (297)
T cd06656 128 LDFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFCAQITPEQSK-----RSTMVGTPYWMAPEVVTRKA------ 191 (297)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC-----CCEEECcCccceEccCCccC-----cCcccCCccccCHHHHcCCC------
Confidence 999999999999999999999987 78999999998765432111 11356899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc---cccc--CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNAL--PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~~--~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|+|++|..||.......... .... ...+..++..+++++.+||+.||++||+++++++
T Consensus 192 ~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--- 268 (297)
T cd06656 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ--- 268 (297)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc---
Confidence 3468999999999999999999997643211111 1111 1234567889999999999999999999999999
Q ss_pred hhhhcCCccccCCCCCh
Q psy4039 508 LYLWAPKHWLYGATPSH 524 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~~~ 524 (588)
|||++...+..
T Consensus 269 ------~~~~~~~~~~~ 279 (297)
T cd06656 269 ------HPFLKLAKPLS 279 (297)
T ss_pred ------Cchhccccccc
Confidence 99998555443
No 171
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.1e-38 Score=318.88 Aligned_cols=248 Identities=22% Similarity=0.261 Sum_probs=195.9
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+..+|++.+.||+|+||.||+|.+. +..+|||.+..... ....+.+|+.+++.+ +||
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------------------~~~~~~~e~~~l~~l----~~~ 59 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM------------------SEDDFIEEAKVMMKL----SHP 59 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC------------------CHHHHHHHHHHHHhC----CCC
Confidence 3467899999999999999999887 45899999843211 123456688888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..++||||+ +++|.+++......+++..+..++.|++.
T Consensus 60 ~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 60 NLVQLYGVCTKQR----------------------------PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred CEEEEEEEEcCCC----------------------------ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 9999999876531 389999999 67999999876557899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+||||||+||+++.+ +.+||+|||+++......... .....++..|+|||++.+..
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~-----~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~y~~Pe~~~~~~----- 177 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED-----NVVKVSDFGLARYVLDDQYTS----SQGTKFPVKWAPPEVFDYSR----- 177 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC-----CcEEECCcccceecccccccc----cCCCCCCccccCHHHhccCC-----
Confidence 9999999999999999999999987 789999999997654321111 11223456899999987654
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
++.++|||||||++|||++ |..||........ .........+..+|+++.+++.+||..+|++|||++++++.|
T Consensus 178 -~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 178 -FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 4568999999999999998 8999865321111 111223345567899999999999999999999999998743
No 172
>KOG4236|consensus
Probab=100.00 E-value=1.2e-39 Score=337.09 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=206.2
Q ss_pred eeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 201 GKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.+.||+|.||+||-|+++ |+.||||+|.+.....+ ....+.+|+.||+.+ .||.||.+-
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k---------------qesqlR~EVaILq~l----~HPGiV~le 629 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK---------------QESQLRNEVAILQNL----HHPGIVNLE 629 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCc---------------hHHHHHHHHHHHHhc----CCCCeeEEE
Confidence 578999999999999998 99999999976544433 234566799999998 999999998
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYL-RERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L-~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
..|+..+ .+|+|||.++|+..+.| .....+|+++....++.||+.||.|||
T Consensus 630 ~M~ET~e----------------------------rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH 681 (888)
T KOG4236|consen 630 CMFETPE----------------------------RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH 681 (888)
T ss_pred EeecCCc----------------------------eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh
Confidence 8887643 39999999998765555 444568999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
-++|+|+||||+|||+.+. ++- +.+||||||+||.+++..- ....+|||+|+|||++..+. ++..-
T Consensus 682 ~knIvHCDLKPENVLLas~-~~F-PQvKlCDFGfARiIgEksF------RrsVVGTPAYLaPEVLrnkG------yNrSL 747 (888)
T KOG4236|consen 682 FKNIVHCDLKPENVLLASA-SPF-PQVKLCDFGFARIIGEKSF------RRSVVGTPAYLAPEVLRNKG------YNRSL 747 (888)
T ss_pred hcceeeccCCchheeeccC-CCC-Cceeeccccceeecchhhh------hhhhcCCccccCHHHHhhcc------ccccc
Confidence 9999999999999999876 333 7999999999999876321 12678999999999998875 34557
Q ss_pred chhhHHHHHHHHhcCCCCCcccccccc----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcC
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAP 513 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~ 513 (588)
|+||+|||+|--++|..||..+....+ ......+.-|..+++++.|||..+|+..=.+|.|.++.+.
T Consensus 748 DMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls--------- 818 (888)
T KOG4236|consen 748 DMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS--------- 818 (888)
T ss_pred cceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc---------
Confidence 999999999999999999977422211 1122334556789999999999999999999999999998
Q ss_pred CccccCC
Q psy4039 514 KHWLYGA 520 (588)
Q Consensus 514 h~w~~~~ 520 (588)
|||+++.
T Consensus 819 h~Wlq~y 825 (888)
T KOG4236|consen 819 HPWLQDY 825 (888)
T ss_pred chhhhcc
Confidence 9999744
No 173
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.1e-38 Score=318.31 Aligned_cols=252 Identities=20% Similarity=0.250 Sum_probs=200.0
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|++.+.||+|+||.||+|.+. +..||||.++.... ..+.+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~------------------~~~~~~~e~~~l~~l---- 58 (261)
T cd05068 1 WEIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM------------------DPKDFLAEAQIMKKL---- 58 (261)
T ss_pred CccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc------------------cHHHHHHHHHHHHHC----
Confidence 3556688999999999999999999986 57899999853211 123456789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ 347 (588)
+||||+++++++.... .++++|||+ +++|.+++.... ..+++..+..++.
T Consensus 59 ~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 110 (261)
T cd05068 59 RHPKLIQLYAVCTLEE----------------------------PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAA 110 (261)
T ss_pred CCCCccceeEEEecCC----------------------------CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHH
Confidence 8999999999877532 389999999 789999998653 4689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||++||+||||||+||+++++ +.++|+|||+++......... .....++..|+|||++.+..
T Consensus 111 ~i~~~l~~lH~~~i~H~dl~p~Nil~~~~-----~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~- 180 (261)
T cd05068 111 QVASGMAYLEAQNYIHRDLAARNVLVGEN-----NICKVADFGLARVIKEDIYEA----REGAKFPIKWTAPEAALYNR- 180 (261)
T ss_pred HHHHHHHHHHhCCeeeccCCcceEEEcCC-----CCEEECCcceEEEccCCcccc----cCCCcCceeccCccccccCC-
Confidence 99999999999999999999999999987 789999999998765321110 11122346899999986554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |+.||.+....... ........+..+++.+.+++.+||+.||++||+++++.
T Consensus 181 -----~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~ 255 (261)
T cd05068 181 -----FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQ 255 (261)
T ss_pred -----CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 4578999999999999999 99999763221111 11112234567889999999999999999999999999
Q ss_pred HHHh
Q psy4039 504 TVCQ 507 (588)
Q Consensus 504 ~~L~ 507 (588)
..|+
T Consensus 256 ~~l~ 259 (261)
T cd05068 256 WKLE 259 (261)
T ss_pred HHHh
Confidence 8776
No 174
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.2e-38 Score=331.00 Aligned_cols=255 Identities=16% Similarity=0.209 Sum_probs=190.7
Q ss_pred Eeeeeccc--CceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 200 IGKFIAKG--TNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 200 ~~~~IG~G--~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
+.++||+| +|++||++.++ |+.||||++........ ....+.+|+.+++.+ +|||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~---------------~~~~~~~e~~~l~~l----~hpniv 62 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNE---------------MVTFLQGELHVSKLF----NHPNIV 62 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHH---------------HHHHHHHHHHHHHhc----CCCCee
Confidence 46789999 78899999987 78999999853211100 123345688888876 999999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++|.+.. ..++||||+ +|+|.+++... ...+++..+..++.|++.||
T Consensus 63 ~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L 114 (327)
T cd08227 63 PYRATFIADN----------------------------ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKAL 114 (327)
T ss_pred eEEEEEEECC----------------------------EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 9999998632 489999999 58999999764 33689999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC-CCccc-cccccccccCCccccchhHHhcCCCCccC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS-GLSMQ-YSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~-~~~~~-~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
.|||+++|+||||||+|||++.+ +.++++|||.+..... +.... .........++..|+|||++.+....
T Consensus 115 ~~LH~~~iiH~dlkp~Nil~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~--- 186 (327)
T cd08227 115 DYIHHMGYVHRSVKASHILISVD-----GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQG--- 186 (327)
T ss_pred HHHHHCCEecCCCChhhEEEecC-----CcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCC---
Confidence 99999999999999999999987 7899999987654322 11110 00011123577889999999764222
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccc--------c-------------------------------------
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY--------E------------------------------------- 466 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~--------~------------------------------------- 466 (588)
++.++|||||||++|||++|+.||......... .
T Consensus 187 -~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (327)
T cd08227 187 -YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRP 265 (327)
T ss_pred -CCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCc
Confidence 457899999999999999999999642100000 0
Q ss_pred ---ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 467 ---VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 467 ---~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.....+....+++++.+++.+||+.||++|||++++++ |||++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~---------~p~f~~ 312 (327)
T cd08227 266 SNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN---------HSFFKQ 312 (327)
T ss_pred cccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc---------Chhhhh
Confidence 00000112345778999999999999999999999999 999974
No 175
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.8e-38 Score=318.46 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=198.7
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|++.+.||+|+||.||+|.+. +..||+|.+..... ..+.+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------------------~~~~~~~E~~~l~~l---- 58 (260)
T cd05070 1 WEIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------------------SPESFLEEAQIMKKL---- 58 (260)
T ss_pred CCCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC------------------CHHHHHHHHHHHHhc----
Confidence 4566688999999999999999999886 56899999853211 123466799999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+. ..+++|||+ +++|.+++... ...+++.++..++.
T Consensus 59 ~~~~i~~~~~~~~~~-----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 109 (260)
T cd05070 59 RHDKLVQLYAVVSEE-----------------------------PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAA 109 (260)
T ss_pred CCCceEEEEeEECCC-----------------------------CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHH
Confidence 999999999876431 278999999 57999999864 23589999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+||+++++ +.++|+|||++.......... .....++..|+|||++.+..
T Consensus 110 ~l~~al~~lH~~~i~H~di~p~Nili~~~-----~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~- 179 (260)
T cd05070 110 QVAAGMAYIERMNYIHRDLRSANILVGDG-----LVCKIADFGLARLIEDNEYTA----RQGAKFPIKWTAPEAALYGR- 179 (260)
T ss_pred HHHHHHHHHHHCCcccCCCccceEEEeCC-----ceEEeCCceeeeeccCccccc----ccCCCCCccccChHHHhcCC-
Confidence 99999999999999999999999999987 789999999997654322110 11233567899999986554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||.+...... ......++.+...+..+.+++.+||..||++|||++++.
T Consensus 180 -----~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 180 -----FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred -----CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 4568999999999999999 8999966322111 111223345667889999999999999999999999998
Q ss_pred HHHh
Q psy4039 504 TVCQ 507 (588)
Q Consensus 504 ~~L~ 507 (588)
+.|+
T Consensus 255 ~~l~ 258 (260)
T cd05070 255 SFLE 258 (260)
T ss_pred HHHh
Confidence 8765
No 176
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.8e-38 Score=318.72 Aligned_cols=245 Identities=21% Similarity=0.252 Sum_probs=192.3
Q ss_pred eecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 203 FIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.||+|+||.||+|.+. +..||||++..... . ...+.+.+|+.+++.+ +||||++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~----~------------~~~~~~~~E~~~l~~l----~h~~ii~~~ 61 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE----K------------SVRDEMMREAEIMHQL----DNPYIVRMI 61 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC----h------------HHHHHHHHHHHHHHhc----CCCCeEEEE
Confidence 3899999999999875 45799999843210 0 0223466789999887 999999999
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
+++... ..++||||+ +++|.+++......+++..+..++.|++.||.|||
T Consensus 62 ~~~~~~-----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH 112 (257)
T cd05115 62 GVCEAE-----------------------------ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE 112 (257)
T ss_pred EEEcCC-----------------------------CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 987532 289999999 68999999876558999999999999999999999
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
++|++||||||+|||++.+ +.+||+|||+++.......... ......+++.|+|||++.... .+.++
T Consensus 113 ~~~i~H~dlkp~nil~~~~-----~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~------~~~~~ 179 (257)
T cd05115 113 GKNFVHRDLAARNVLLVNQ-----HYAKISDFGLSKALGADDSYYK--ARSAGKWPLKWYAPECINFRK------FSSRS 179 (257)
T ss_pred hcCeeecccchheEEEcCC-----CcEEeccCCccccccCCcccee--ccCCCCCCcccCCHHHHccCC------CCchh
Confidence 9999999999999999887 7899999999976543221110 111223467899999987654 45789
Q ss_pred chhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 438 DAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 438 DVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
|||||||++||+++ |..||.+...... ......+..+..+++++.+++.+||..||++||++.++.+.|+.+
T Consensus 180 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 180 DVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred hHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 99999999999996 9999976422211 112233456677899999999999999999999999999988754
No 177
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.3e-38 Score=323.60 Aligned_cols=258 Identities=24% Similarity=0.261 Sum_probs=196.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||.+...... ......+.+|+.+++.+ ..|||
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---------------~~~~~~~~~E~~~l~~l---~~~~~ 62 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---------------EGIPPTALREISLLQML---SESIY 62 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---------------cCCchHHHHHHHHHHHc---cCCCC
Confidence 47899999999999999999986 789999997431100 01223456789999887 46799
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc----CCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC----AQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~----~~l~~~~~~~i~~ql 349 (588)
|+++++++..... ......|++|||+.++|.+++.... ..+++..+..++.||
T Consensus 63 i~~~~~~~~~~~~-----------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi 119 (295)
T cd07837 63 IVRLLDVEHVEEK-----------------------NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQL 119 (295)
T ss_pred ccceeeeEeecCC-----------------------CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHH
Confidence 9999998876321 1122489999999889999987542 358999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcC-CCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDC-SEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~-~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++||.|||+++|+||||||+||+++. + +.+||+|||+++........ .....+++.|+|||++.+...
T Consensus 120 ~~~L~~LH~~~i~H~dl~~~nil~~~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~- 188 (295)
T cd07837 120 LKGVAHCHKHGVMHRDLKPQNLLVDKQK-----GLLKIADLGLGRAFSIPVKS-----YTHEIVTLWYRAPEVLLGSTH- 188 (295)
T ss_pred HHHHHHHHHCCeeecCCChHHEEEecCC-----CeEEEeecccceecCCCccc-----cCCcccccCCCChHHhhCCCC-
Confidence 99999999999999999999999997 4 78999999999765332111 112357889999999865331
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---------------c----c---cccC--------CCCCCcc
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---------------E----V---NALP--------QLNTNVP 478 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---------------~----~---~~~~--------~~~~~~~ 478 (588)
.+.++|||||||++|||++|..||.+....... . . ...+ .....++
T Consensus 189 ----~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (295)
T cd07837 189 ----YSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLS 264 (295)
T ss_pred ----CCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccC
Confidence 357899999999999999999999653111000 0 0 0000 0113578
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+++.++|.+||+.||.+||++++++. |||++
T Consensus 265 ~~~~~~i~~~l~~~P~~R~~~~eil~---------~~~~~ 295 (295)
T cd07837 265 PEGLDLLQKMLRYDPAKRISAKAALT---------HPYFD 295 (295)
T ss_pred HHHHHHHHHHccCChhhcCCHHHHhc---------CCCcC
Confidence 88999999999999999999999999 99984
No 178
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.2e-39 Score=325.97 Aligned_cols=253 Identities=19% Similarity=0.244 Sum_probs=196.6
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
+...+|.+.+.||+|+||.||+|.+. +..||||++..... . .....+.+|+.++..+
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~----~------------~~~~~~~~e~~~~~~l 65 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE----G------------PLREEFKHEAMMRSRL 65 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC----H------------HHHHHHHHHHHHHhcC
Confidence 45577889999999999999999874 47899999853210 0 0123455688888776
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-----------
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER----------- 333 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~----------- 333 (588)
+||||+++++++.+.. ..++++||+ +++|.+++...
T Consensus 66 ----~h~~iv~~~~~~~~~~----------------------------~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (283)
T cd05091 66 ----QHPNIVCLLGVVTKEQ----------------------------PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDD 113 (283)
T ss_pred ----CCCCcCeEEEEEcCCC----------------------------ceEEEEEcCCCCcHHHHHHhcCCCcccccccc
Confidence 8999999999987632 388999999 57999998632
Q ss_pred ----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccccc
Q psy4039 334 ----CAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE 409 (588)
Q Consensus 334 ----~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 409 (588)
...+++..+..++.|++.||.|||++||+||||||+|||++++ +.+||+|||+++......... ....
T Consensus 114 ~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~~~~---~~~~ 185 (283)
T cd05091 114 DKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK-----LNVKISDLGLFREVYAADYYK---LMGN 185 (283)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC-----CceEecccccccccccchhee---eccC
Confidence 1247888999999999999999999999999999999999977 789999999988654322111 1123
Q ss_pred ccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc---ccccCCCCCCccHHHHHHH
Q psy4039 410 LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE---VNALPQLNTNVPEVMRRLV 485 (588)
Q Consensus 410 ~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~Li 485 (588)
..+++.|+|||.+.+.. .+.++|||||||++|||++ |..||.+........ .......+..+|.++.+++
T Consensus 186 ~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li 259 (283)
T cd05091 186 SLLPIRWMSPEAIMYGK------FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLM 259 (283)
T ss_pred ccCCccccCHHHHhcCC------CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence 45678999999986554 4578999999999999998 888887632221111 2223345678999999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHh
Q psy4039 486 AKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+||+.+|.+||++++++..|+
T Consensus 260 ~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 260 LECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHhCCCcccCCCHHHHHHHhh
Confidence 9999999999999999988665
No 179
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.6e-38 Score=318.57 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=199.7
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|.+.+.||+|+||.||+|.+. ...||||++..... ....+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------------------~~~~~~~E~~~l~~l---- 58 (262)
T cd05071 1 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------------------SPEAFLQEAQVMKKL---- 58 (262)
T ss_pred CCCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------------------CHHHHHHHHHHHHhC----
Confidence 3455578999999999999999999886 45799999853111 123466789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+. ..+++|||+ +|+|.+++... ...+++..+..++.
T Consensus 59 ~~~~i~~~~~~~~~~-----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 109 (262)
T cd05071 59 RHEKLVQLYAVVSEE-----------------------------PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 109 (262)
T ss_pred CCCCcceEEEEECCC-----------------------------CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHH
Confidence 899999999876431 278999999 57999999864 33689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|+++||.|||+.+|+||||||+||+++.+ +.++|+|||.++......... .....++..|+|||+..+..
T Consensus 110 ~l~~aL~~lH~~~i~H~dl~p~Nill~~~-----~~~~L~dfg~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~- 179 (262)
T cd05071 110 QIASGMAYVERMNYVHRDLRAANILVGEN-----LVCKVADFGLARLIEDNEYTA----RQGAKFPIKWTAPEAALYGR- 179 (262)
T ss_pred HHHHHHHHHHHCCccccccCcccEEEcCC-----CcEEeccCCceeecccccccc----ccCCcccceecCHhHhccCC-
Confidence 99999999999999999999999999987 789999999997654422111 11234677899999986554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc---ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE---VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||.+........ .......+..++..+.+++.+||+.||++||++.+++
T Consensus 180 -----~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~ 254 (262)
T cd05071 180 -----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ 254 (262)
T ss_pred -----CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 4578999999999999999 888886643221111 1112233456889999999999999999999999999
Q ss_pred HHHhhhh
Q psy4039 504 TVCQLYL 510 (588)
Q Consensus 504 ~~L~~~~ 510 (588)
+.|+.++
T Consensus 255 ~~l~~~~ 261 (262)
T cd05071 255 AFLEDYF 261 (262)
T ss_pred HHHHHhc
Confidence 9887654
No 180
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.4e-38 Score=323.75 Aligned_cols=255 Identities=19% Similarity=0.254 Sum_probs=200.1
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
++..+|.+.+.||+|+||.||+|.+. +..+|+|.+..... ...+.+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-----------------~~~~~~~~e~~~l~~l 64 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-----------------AARKDFQREAELLTNL 64 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-----------------HHHHHHHHHHHHHhcC
Confidence 34578999999999999999999864 45699998742110 0123456788888887
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----------
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---------- 334 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---------- 334 (588)
+||||+++++++.+.. ..++||||+ +++|.+++....
T Consensus 65 ----~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~ 112 (291)
T cd05094 65 ----QHEHIVKFYGVCGDGD----------------------------PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 112 (291)
T ss_pred ----CCCCcceEEEEEccCC----------------------------ceEEEEecCCCCcHHHHHHhcCcccccccccc
Confidence 9999999999987532 389999999 689999997642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccccc
Q psy4039 335 -----AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIE 409 (588)
Q Consensus 335 -----~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~ 409 (588)
..+++..++.++.|++.||.|||++||+||||||+|||++.+ +.++|+|||++......... .....
T Consensus 113 ~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~-----~~~~l~dfg~a~~~~~~~~~---~~~~~ 184 (291)
T cd05094 113 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN-----LLVKIGDFGMSRDVYSTDYY---RVGGH 184 (291)
T ss_pred cccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC-----CcEEECCCCcccccCCCcee---ecCCC
Confidence 248999999999999999999999999999999999999987 79999999999765432111 11123
Q ss_pred ccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHH
Q psy4039 410 LGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLV 485 (588)
Q Consensus 410 ~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li 485 (588)
..|++.|+|||++.+.. .+.++|||||||++|||++ |..||........ ......+..+..+|..+.+++
T Consensus 185 ~~~~~~y~aPE~~~~~~------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 258 (291)
T cd05094 185 TMLPIRWMPPESIMYRK------FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIM 258 (291)
T ss_pred CCcceeecChHHhccCC------CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHH
Confidence 45788999999987654 4568999999999999998 9999865322111 122233344566889999999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 486 AKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
.+||+.||++||+++++++.|+...
T Consensus 259 ~~~l~~~P~~Rpt~~~v~~~l~~~~ 283 (291)
T cd05094 259 LGCWQREPQQRLNIKEIYKILHALG 283 (291)
T ss_pred HHHcccChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999887553
No 181
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.9e-38 Score=325.38 Aligned_cols=256 Identities=26% Similarity=0.269 Sum_probs=199.6
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
..++|++.+.||+|+||.||+|.+. +..||+|.+....... .......+|+.+++.+ +|
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h 65 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---------------GIPISSLREITLLLNL----RH 65 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---------------CCcchhhHHHHHHHhC----CC
Confidence 4589999999999999999999986 7899999985321110 0112334689999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
+||+++++++.+.. ...+++||||++++|.+++......+++.++..++.|+++
T Consensus 66 ~~i~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 66 PNIVELKEVVVGKH--------------------------LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred CCCcceEEEEecCC--------------------------CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 99999999987531 1248999999998999998875557999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+.|++||||||+||+++.+ +.+||+|||++......... .....+++.|+|||++.+...
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~-----~~~kL~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~---- 185 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK-----GCLKIADFGLARTYGLPAKP-----MTPKVVTLWYRAPELLLGCTT---- 185 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC-----CCEEECccceeeecCCccCC-----CCcccccccccChhhhcCCCC----
Confidence 9999999999999999999999987 78999999999876542111 112346789999999865431
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc------------------------ccccCC--------CCCCccH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE------------------------VNALPQ--------LNTNVPE 479 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~------------------------~~~~~~--------~~~~~~~ 479 (588)
++.++||||+||++|||++|.+||.......... ....+. .....++
T Consensus 186 -~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (309)
T cd07845 186 -YTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSE 264 (309)
T ss_pred -cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCH
Confidence 4568999999999999999999996532111000 000000 0123578
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++.++|.+||+.||++|||+++++. |||++
T Consensus 265 ~~~~li~~ml~~dp~~R~t~~~il~---------h~~f~ 294 (309)
T cd07845 265 AGLRLLNFLLMYDPKKRATAEEALE---------SSYFK 294 (309)
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhc---------Chhhc
Confidence 8999999999999999999999998 99998
No 182
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5e-38 Score=318.01 Aligned_cols=252 Identities=24% Similarity=0.310 Sum_probs=197.4
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.+++.....||+|+||.||+|.+. +..||+|.+.... .. ..+.+.+|+.+++.+ +||
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~----~~-------------~~~~~~~e~~~l~~l----~h~ 65 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD----SR-------------YVQPLHEEIALHSYL----KHR 65 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC----HH-------------HHHHHHHHHHHHHhc----CCC
Confidence 355556678999999999999976 6789999874311 00 123456788999887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCC--CHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQL--SMHERVLLFTQL 349 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l--~~~~~~~i~~ql 349 (588)
||+++++++.+. ...+++|||+ +++|.+++......+ ++..+..++.|+
T Consensus 66 ~iv~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi 117 (268)
T cd06624 66 NIVQYLGSDSEN----------------------------GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQI 117 (268)
T ss_pred CeeeeeeeeccC----------------------------CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHH
Confidence 999999988763 2489999999 589999998754455 888999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||++||+||||||+||+++.+. +.++|+|||++........ ......|++.|+|||++......
T Consensus 118 ~~al~~lH~~~i~h~dl~p~nil~~~~~----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~~- 187 (268)
T cd06624 118 LEGLKYLHDNQIVHRDIKGDNVLVNTYS----GVVKISDFGTSKRLAGINP-----CTETFTGTLQYMAPEVIDKGPRG- 187 (268)
T ss_pred HHHHHHHHHCCEeecCCCHHHEEEcCCC----CeEEEecchhheecccCCC-----ccccCCCCccccChhhhcccccc-
Confidence 9999999999999999999999998642 5899999999876543211 11134589999999998654322
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc--c---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--Y---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++|||||||++|+|++|+.||........ . .....+.++..+++++++++.+||+.+|.+|||+.+++.
T Consensus 188 ---~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 188 ---YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ---CCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 34689999999999999999999965321110 0 112334566778899999999999999999999999999
Q ss_pred HHhhhhhcCCccc
Q psy4039 505 VCQLYLWAPKHWL 517 (588)
Q Consensus 505 ~L~~~~~~~h~w~ 517 (588)
|||+
T Consensus 265 ---------~~~~ 268 (268)
T cd06624 265 ---------DPFL 268 (268)
T ss_pred ---------CCCC
Confidence 9996
No 183
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8e-38 Score=316.41 Aligned_cols=257 Identities=22% Similarity=0.267 Sum_probs=199.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|+..+.||+|+||.||+|.+. +..||+|.+........... ....+.+|+.+++.+ +|||
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~------------~~~~~~~e~~~l~~l----~h~~ 65 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSK------------EVSALECEIQLLKNL----QHER 65 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHH------------HHHHHHHHHHHHHHc----CCCC
Confidence 47889999999999999999985 78999999854322111110 123456788899887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ...++++|||+ +++|.+++.... .+++.....++.|++.|
T Consensus 66 i~~~~~~~~~~~--------------------------~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~ 118 (266)
T cd06651 66 IVQYYGCLRDRA--------------------------EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEG 118 (266)
T ss_pred eeeEEEEEEcCC--------------------------CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999886521 12489999999 579999998654 68999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+||||||+||+++.+ +.++|+|||+++........ ........|+..|+|||++.+..
T Consensus 119 l~~LH~~~i~H~~l~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~------ 185 (266)
T cd06651 119 MSYLHSNMIVHRDIKGANILRDSA-----GNVKLGDFGASKRLQTICMS--GTGIRSVTGTPYWMSPEVISGEG------ 185 (266)
T ss_pred HHHHHhCCeeeCCCCHHHEEECCC-----CCEEEccCCCcccccccccc--CCccccCCccccccCHHHhCCCC------
Confidence 999999999999999999999877 78999999998765331110 11111345899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+.++|||||||++|||++|+.||......... .....+.++..+++.+++++ +||..+|++||+++++++
T Consensus 186 ~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~---- 260 (266)
T cd06651 186 YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR---- 260 (266)
T ss_pred CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc----
Confidence 457899999999999999999999753211111 11223455667788899999 688889999999999999
Q ss_pred hhhcCCcccc
Q psy4039 509 YLWAPKHWLY 518 (588)
Q Consensus 509 ~~~~~h~w~~ 518 (588)
|||++
T Consensus 261 -----hp~~~ 265 (266)
T cd06651 261 -----HPFAQ 265 (266)
T ss_pred -----Ccccc
Confidence 99985
No 184
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.8e-38 Score=323.40 Aligned_cols=279 Identities=20% Similarity=0.231 Sum_probs=216.2
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
...+.+..++|++.+.||+|+||.||+|.+. ++.||||.+....... ....+.+|+.++...
T Consensus 7 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------~~~~~~~e~~~~~~~ 70 (296)
T cd06618 7 GQKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE----------------ENKRILMDLDVVLKS 70 (296)
T ss_pred ceeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH----------------HHHHHHHHHHHHHhc
Confidence 3455677799999999999999999999998 8999999985422110 112233456555544
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
..||||+++++++.+.. ..|++|||++++|.+++......+++..+..+
T Consensus 71 ---~~~~~i~~~~~~~~~~~----------------------------~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i 119 (296)
T cd06618 71 ---HDCPYIVKCYGYFITDS----------------------------DVFICMELMSTCLDKLLKRIQGPIPEDILGKM 119 (296)
T ss_pred ---cCCCchHhhheeeecCC----------------------------eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHH
Confidence 46999999999987632 48999999988888888765558999999999
Q ss_pred HHHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhc
Q psy4039 346 FTQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 346 ~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
+.|+++||.|||+ .||+||||+|+||+++.+ +.+||+|||++......... ....|++.|+|||++.+
T Consensus 120 ~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~-----~~~kL~dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~ 188 (296)
T cd06618 120 TVAIVKALHYLKEKHGVIHRDVKPSNILLDAS-----GNVKLCDFGISGRLVDSKAK------TRSAGCAAYMAPERIDP 188 (296)
T ss_pred HHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC-----CCEEECccccchhccCCCcc------cCCCCCccccCHhhcCC
Confidence 9999999999997 699999999999999877 78999999998765432111 13357889999999875
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc-c---cccccCCC--CCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-Y---EVNALPQL--NTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-~---~~~~~~~~--~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
... ....+.++||||||+++|||++|+.||........ . .....+.. ...+++++.+++.+||+.||++||+
T Consensus 189 ~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~ 266 (296)
T cd06618 189 PDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK 266 (296)
T ss_pred CCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence 431 11144689999999999999999999965211100 0 01111112 2347899999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCccccCCCCChhHHHHHHHhhh
Q psy4039 499 AELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLTLT 535 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~~~ 535 (588)
+++++. |+|+....+...++..|+..+-
T Consensus 267 ~~~il~---------~~~~~~~~~~~~~~~~~~~~~~ 294 (296)
T cd06618 267 YRELLQ---------HPFIRRYETAEVDVAGWFQDVM 294 (296)
T ss_pred HHHHhc---------ChhhhccchhHHHHHHHHHHHh
Confidence 999999 9999999999999999988753
No 185
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.5e-38 Score=317.30 Aligned_cols=246 Identities=24% Similarity=0.290 Sum_probs=192.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|++. ++.||+|++...... ....+.+|+.+++.+ +|||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-----------------~~~~~~~e~~~l~~~----~h~~ 67 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD-----------------DFSLIQQEIFMVKEC----KHCN 67 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc-----------------hHHHHHHHHHHHHhc----CCCC
Confidence 78999999999999999999985 789999998532110 112345688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+ +++|.+++.... .+++.++..++.|++.|
T Consensus 68 ii~~~~~~~~~~----------------------------~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~ 118 (267)
T cd06646 68 IVAYFGSYLSRE----------------------------KLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQG 118 (267)
T ss_pred eeeeeEEEEeCC----------------------------EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 999999987632 489999999 579999987654 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+||||||+||+++.+ +.++|+|||+++....... ......|++.|+|||.+...... .
T Consensus 119 l~~lH~~~i~H~dl~p~nill~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~---~ 185 (267)
T cd06646 119 LAYLHSKGKMHRDIKGANILLTDN-----GDVKLADFGVAAKITATIA-----KRKSFIGTPYWMAPEVAAVEKNG---G 185 (267)
T ss_pred HHHHHHCCccccCCCHHHEEECCC-----CCEEECcCccceeeccccc-----ccCccccCccccCHhHcccccCC---C
Confidence 999999999999999999999877 7899999999976543211 11235689999999998543211 1
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cc-c-ccC--CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EV-N-ALP--QLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~-~-~~~--~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++|||||||++|||++|..||......... .. . ..+ .....++..+.+++.+||+.||++|||++++++
T Consensus 186 ~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 264 (267)
T cd06646 186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLT 264 (267)
T ss_pred CcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhc
Confidence 346799999999999999999998653211110 00 0 111 112356889999999999999999999999988
No 186
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.9e-38 Score=317.84 Aligned_cols=244 Identities=24% Similarity=0.315 Sum_probs=189.8
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||+|+||.||+|++. ++.||+|.+.... . . .....+.+|+.+++.+ +||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~---~------------~~~~~~~~e~~~l~~l----~h~~i~~~~~ 60 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-P---P------------DLKAKFLQEARILKQY----SHPNIVRLIG 60 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-C---H------------HHHHHHHHHHHHHHhC----CCCCcceEEE
Confidence 46999999999999985 8899999874211 0 0 0223456788888887 8999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. ..++||||+ +++|.+++......+++.+++.++.|++.||.|||+
T Consensus 61 ~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~ 112 (252)
T cd05084 61 VCTQKQ----------------------------PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES 112 (252)
T ss_pred EEcCCC----------------------------CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 987632 389999999 679999998765578999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
++|+||||||+|||++.+ +.+||+|||+++....+.... ......++..|+|||.+.+.. .+.++|
T Consensus 113 ~~i~H~dl~p~nil~~~~-----~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~D 178 (252)
T cd05084 113 KHCIHRDLAARNCLVTEK-----NVLKISDFGMSREEEDGVYAS---TGGMKQIPVKWTAPEALNYGR------YSSESD 178 (252)
T ss_pred CCccccccchheEEEcCC-----CcEEECccccCcccccccccc---cCCCCCCceeecCchhhcCCC------CChHHH
Confidence 999999999999999877 789999999987654321111 001122356799999986654 456899
Q ss_pred hhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 439 AWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 439 VwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
||||||++|||++ |..||....... ..........+..+|..+.+++.+||+.||++|||++++++.|+
T Consensus 179 v~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 179 VWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 9999999999997 888886532111 11112233455678899999999999999999999999988664
No 187
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.7e-38 Score=316.99 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=198.5
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|.+...||+|+||.||+|.+. +..+|+|.+..... ..+.+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~------------------~~~~~~~E~~~l~~l---- 58 (260)
T cd05069 1 WEIPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM------------------MPEAFLQEAQIMKKL---- 58 (260)
T ss_pred CcCChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc------------------cHHHHHHHHHHHHhC----
Confidence 3455578999999999999999999987 45799998743211 123456799999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+. ..+++|||+ +++|.+++... ...+++..+..++.
T Consensus 59 ~h~~i~~~~~~~~~~-----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 109 (260)
T cd05069 59 RHDKLVPLYAVVSEE-----------------------------PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAA 109 (260)
T ss_pred CCCCeeeEEEEEcCC-----------------------------CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHH
Confidence 999999999876431 278999999 57999999764 33589999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+.||+||||||+||+++++ +.++|+|||+++......... .....++..|+|||+..+..
T Consensus 110 ~l~~al~~lH~~~i~H~dl~~~Nill~~~-----~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~y~~Pe~~~~~~- 179 (260)
T cd05069 110 QIADGMAYIERMNYIHRDLRAANILVGDN-----LVCKIADFGLARLIEDNEYTA----RQGAKFPIKWTAPEAALYGR- 179 (260)
T ss_pred HHHHHHHHHHhCCEeecccCcceEEEcCC-----CeEEECCCccceEccCCcccc----cCCCccchhhCCHHHhccCC-
Confidence 99999999999999999999999999987 789999999997654322111 11234677899999986554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||.+...... ......+..+..++..+++++.+||+.||++||++++++
T Consensus 180 -----~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 254 (260)
T cd05069 180 -----FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQ 254 (260)
T ss_pred -----cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 3467999999999999999 8999976432211 111222344567889999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 255 ~~l~~ 259 (260)
T cd05069 255 SFLED 259 (260)
T ss_pred HHHhc
Confidence 87763
No 188
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.1e-38 Score=322.35 Aligned_cols=246 Identities=25% Similarity=0.347 Sum_probs=190.4
Q ss_pred EEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 199 QIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
++.+.||.|.||.||+|.+. +..|+||++.... .. ...+.+.+|+.+++.+ +||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~---~~-------------~~~~~~~~e~~~l~~l----~h~ 61 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS---SE-------------EEEEEFLNEIQILRKL----RHP 61 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS---SH-------------HHHHHHHHHHHHHHTH----SBT
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc---cc-------------ccceeeeecccccccc----ccc
Confidence 56789999999999999998 7899999994311 10 0134566788999887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~ 350 (588)
||++++|++.... ..++||||+ +|+|.++|... ...+++.++..|+.|++
T Consensus 62 ni~~~~g~~~~~~----------------------------~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~ 113 (259)
T PF07714_consen 62 NIVKLYGFCIENE----------------------------PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIA 113 (259)
T ss_dssp TBE-EEEEEESSS----------------------------SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHH
T ss_pred ccccccccccccc----------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998532 289999999 58999999987 55899999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||+++|+|+||+++|||++.+ +.+||+|||++......... .......+...|+|||.+....
T Consensus 114 ~~l~~Lh~~~iiH~~l~~~nill~~~-----~~~Kl~~f~~~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~---- 181 (259)
T PF07714_consen 114 EALSYLHSNNIIHGNLSPSNILLDSN-----GQVKLSDFGLSRPISEKSKY---KNDSSQQLPLRYLAPEVLKDGE---- 181 (259)
T ss_dssp HHHHHHHHTTEEEST-SGGGEEEETT-----TEEEEESTTTGEETTTSSSE---EESTTSESGGGGS-HHHHHHSE----
T ss_pred cccccccccccccccccccccccccc-----cccccccccccccccccccc---cccccccccccccccccccccc----
Confidence 99999999999999999999999988 89999999999876332111 1111344677999999998765
Q ss_pred CCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++||||||+++|||++ |+.||.+..... ..........+..+|..+.++|..||+.||++|||++++++.|
T Consensus 182 --~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 182 --YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --ccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 4578999999999999999 688986632211 1123333455678999999999999999999999999998744
No 189
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.8e-38 Score=316.72 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=199.9
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++.-++|++.++||+|+||.||+|... +..||+|.+..... ....+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~------------------~~~~~~~E~~~l~~l---- 58 (260)
T cd05067 1 WEVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM------------------SPEAFLAEANLMKQL---- 58 (260)
T ss_pred CccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC------------------cHHHHHHHHHHHHhc----
Confidence 3455688999999999999999999986 68999999843211 223466789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+. ..+++|||+ +++|.+++... +..+++.++..++.
T Consensus 59 ~h~~i~~~~~~~~~~-----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 109 (260)
T cd05067 59 QHPRLVRLYAVVTQE-----------------------------PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAA 109 (260)
T ss_pred CCcCeeeEEEEEccC-----------------------------CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHH
Confidence 899999999886431 279999999 68999998764 34789999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||+|||+.|++||||||+||+++.+ +.++|+|||++......... ......++..|+|||++.+..
T Consensus 110 ~i~~al~~LH~~~i~H~dl~p~ni~i~~~-----~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~- 179 (260)
T cd05067 110 QIAEGMAFIERKNYIHRDLRAANILVSET-----LCCKIADFGLARLIEDNEYT----AREGAKFPIKWTAPEAINYGT- 179 (260)
T ss_pred HHHHHHHHHhcCCeecccccHHhEEEcCC-----CCEEEccCcceeecCCCCcc----cccCCcccccccCHHHhccCC-
Confidence 99999999999999999999999999987 78999999999776532111 111234677899999987554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |+.||.+...... .......+.+..+|.++.+++.+||+.+|++||+++++.
T Consensus 180 -----~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05067 180 -----FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLR 254 (260)
T ss_pred -----cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 4568999999999999998 9999975422111 111222345567889999999999999999999999999
Q ss_pred HHHh
Q psy4039 504 TVCQ 507 (588)
Q Consensus 504 ~~L~ 507 (588)
..|+
T Consensus 255 ~~l~ 258 (260)
T cd05067 255 SVLE 258 (260)
T ss_pred HHhh
Confidence 8765
No 190
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-38 Score=324.39 Aligned_cols=250 Identities=24% Similarity=0.307 Sum_probs=201.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|++.+.||.|+||.||+|.+. ++.||||.+...... ....+.+|+.+++.+ +|||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-----------------~~~~~~~e~~~l~~l----~h~~ 77 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-----------------KKELIINEILVMKEL----KNPN 77 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-----------------hHHHHHHHHHHHHhc----CCCc
Confidence 67999999999999999999875 789999998432111 223456688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++|+||+ +++|..++... .+++.++..++.|++.|
T Consensus 78 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~a 127 (296)
T cd06655 78 IVNFLDSFLVGD----------------------------ELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQA 127 (296)
T ss_pred eeeeeeeEecCc----------------------------eEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHH
Confidence 999999987632 489999999 67999998765 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++|++||||||+||+++.+ +.+||+|||++......... .....|++.|+|||.+.+..
T Consensus 128 l~~LH~~~i~H~dL~p~Nili~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~------ 191 (296)
T cd06655 128 LEFLHANQVIHRDIKSDNVLLGMD-----GSVKLTDFGFCAQITPEQSK-----RSTMVGTPYWMAPEVVTRKA------ 191 (296)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC-----CCEEEccCccchhccccccc-----CCCcCCCccccCcchhcCCC------
Confidence 999999999999999999999887 78999999998765432111 11346899999999987554
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc-----ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-----VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|+|++|+.||.......... .......+..+++.+.++|.+||..||.+||++.+++.
T Consensus 192 ~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~--- 268 (296)
T cd06655 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ--- 268 (296)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh---
Confidence 4578999999999999999999997642211110 01111234568899999999999999999999999999
Q ss_pred hhhhcCCccccCCC
Q psy4039 508 LYLWAPKHWLYGAT 521 (588)
Q Consensus 508 ~~~~~~h~w~~~~~ 521 (588)
|||++...
T Consensus 269 ------~~~~~~~~ 276 (296)
T cd06655 269 ------HPFLKLAK 276 (296)
T ss_pred ------ChHhhhcc
Confidence 99998443
No 191
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.1e-38 Score=322.11 Aligned_cols=265 Identities=21% Similarity=0.238 Sum_probs=199.5
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
.+++|++.+.||+|+||.||+|... ++.||||.+....... .......+|+.+++.+ +|
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~h 70 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---------------GFPITALREIKILQLL----KH 70 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---------------CchhHHHHHHHHHHhC----CC
Confidence 3478999999999999999999986 7899999985321110 0112334688888887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||+++++++.+.... ........++||||++++|.+++......+++.++..++.|+++
T Consensus 71 ~~iv~~~~~~~~~~~~--------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 130 (310)
T cd07865 71 ENVVNLIEICRTKATP--------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLN 130 (310)
T ss_pred CCccceEEEEeccccc--------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 9999999998764210 11223358999999998999998876557999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+|+||||+||+++.+ +.+||+|||++.......... ........++..|+|||++.+...
T Consensus 131 al~~lH~~~i~H~dl~p~nil~~~~-----~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~---- 200 (310)
T cd07865 131 GLYYIHRNKILHRDMKAANILITKD-----GILKLADFGLARAFSLSKNSK-PNRYTNRVVTLWYRPPELLLGERD---- 200 (310)
T ss_pred HHHHHHHCCeeccCCCHHHEEECCC-----CcEEECcCCCcccccCCcccC-CCCccCcccCccccCcHHhcCCcc----
Confidence 9999999999999999999999987 799999999998654422111 111123567889999999865431
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccc----------ccc--------------ccCC---------C-CCCc
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----------EVN--------------ALPQ---------L-NTNV 477 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----------~~~--------------~~~~---------~-~~~~ 477 (588)
.+.++||||||+++|||++|..||.+....... ... ..+. + +...
T Consensus 201 -~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 279 (310)
T cd07865 201 -YGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK 279 (310)
T ss_pred -cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccC
Confidence 346899999999999999999998653211000 000 0000 0 1123
Q ss_pred cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 478 PEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 478 ~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+..+.++|.+||..||++|||++++++ |||+
T Consensus 280 ~~~~~dli~~~l~~~P~~R~t~~e~l~---------h~~f 310 (310)
T cd07865 280 DPHALDLIDKLLVLDPAKRIDADTALN---------HDFF 310 (310)
T ss_pred CHHHHHHHHHHhcCChhhccCHHHHhc---------CCCC
Confidence 567889999999999999999999999 9996
No 192
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.7e-38 Score=319.59 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=195.2
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.+.||+|+||.||+|.+. ++.||+|.++..... ....+.+|+.+++.+ +||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------~~~~~~~e~~~~~~l----~h~ 66 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE-----------------DFAVVQQEIIMMKDC----KHS 66 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh-----------------HHHHHHHHHHHHHhC----CCC
Confidence 368899999999999999999985 789999998532110 112345688888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..+++|||+ +++|.+++...+ .+++.++..++.|++.
T Consensus 67 ~ii~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~ 117 (267)
T cd06645 67 NIVAYFGSYLRRD----------------------------KLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQ 117 (267)
T ss_pred CeeeEEEEEEeCC----------------------------EEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 9999999887632 489999999 579999987654 7999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||++||+|+||||+||+++.+ +.++|+|||++........ ......||+.|+|||++......
T Consensus 118 ~l~~lH~~~i~H~dlkp~nili~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~--- 184 (267)
T cd06645 118 GLYYLHSKGKMHRDIKGANILLTDN-----GHVKLADFGVSAQITATIA-----KRKSFIGTPYWMAPEVAAVERKG--- 184 (267)
T ss_pred HHHHHHHCCeecCCCCHHHEEECCC-----CCEEECcceeeeEccCccc-----ccccccCcccccChhhhccccCC---
Confidence 9999999999999999999999877 7899999999876543211 11245689999999998532110
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc----ccc-cCCC--CCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----VNA-LPQL--NTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----~~~-~~~~--~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
..+.++|||||||++|||++|..||.......... ... .+.. ...++..+.+++.+||+.||++|||++++++
T Consensus 185 ~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 13468999999999999999999986532111110 011 1111 1246788999999999999999999999998
Q ss_pred HHhhhhhcCCcc
Q psy4039 505 VCQLYLWAPKHW 516 (588)
Q Consensus 505 ~L~~~~~~~h~w 516 (588)
|||
T Consensus 265 ---------~~~ 267 (267)
T cd06645 265 ---------HPF 267 (267)
T ss_pred ---------CCC
Confidence 998
No 193
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-38 Score=325.80 Aligned_cols=260 Identities=22% Similarity=0.249 Sum_probs=201.1
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNED 259 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei 259 (588)
..+++..++|.+++.||+|+||.||++.+. ...||+|.+..... . .....+.+|+
T Consensus 11 ~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~-------------~~~~~~~~e~ 74 (307)
T cd05098 11 PRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT---E-------------KDLSDLISEM 74 (307)
T ss_pred CcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC---h-------------HHHHHHHHHH
Confidence 356666789999999999999999999864 24699999853210 0 0123455688
Q ss_pred HHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----
Q psy4039 260 MLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---- 334 (588)
Q Consensus 260 ~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---- 334 (588)
.+++.+ .+||||+++++++.+.. ..|+||||+ +|+|.+++..+.
T Consensus 75 ~~l~~l---~~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~ 123 (307)
T cd05098 75 EMMKMI---GKHKNIINLLGACTQDG----------------------------PLYVIVEYASKGNLREYLRARRPPGM 123 (307)
T ss_pred HHHHHh---cCCCCEeeEEEEEecCC----------------------------ceEEEEecCCCCcHHHHHHhcCCccc
Confidence 888776 47999999999987632 389999999 589999998642
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 335 -----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 335 -----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
..+++.++..++.|++.||+|||++|++||||||+|||++.+ +.+||+|||+++.........
T Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~-----~~~kL~dfg~a~~~~~~~~~~- 197 (307)
T cd05098 124 EYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-----NVMKIADFGLARDIHHIDYYK- 197 (307)
T ss_pred ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC-----CcEEECCCcccccccccchhh-
Confidence 248899999999999999999999999999999999999987 789999999987654321111
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccH
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPE 479 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~ 479 (588)
......+++.|+|||++.+.. ++.++|||||||++|||++ |..||........ .........+..++.
T Consensus 198 --~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (307)
T cd05098 198 --KTTNGRLPVKWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN 269 (307)
T ss_pred --ccccCCCccceeChHHhccCC------CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCH
Confidence 111223457899999987654 4578999999999999998 8889865322111 112223345667889
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
++++++.+||+.+|++|||+.++++.|+..
T Consensus 270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999999987754
No 194
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.8e-38 Score=319.36 Aligned_cols=251 Identities=20% Similarity=0.243 Sum_probs=194.0
Q ss_pred eEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
|++.+.||+|+||+||.+.+. +..||+|.+...... .....+.+|+.+++.+ +|
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h 65 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ----------------QNTSGWKKEINILKTL----YH 65 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh----------------HHHHHHHHHHHHHHhC----CC
Confidence 488999999999999887643 678999998532110 0123456789999887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||+++++++.... ...++++|||+ +++|.+++... .+++.+++.++.|++
T Consensus 66 ~~i~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~ 117 (283)
T cd05080 66 ENIVKYKGCCSEQG--------------------------GKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQIC 117 (283)
T ss_pred CCEeeEEEEEecCC--------------------------CceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHH
Confidence 99999999876521 12489999999 57999999775 799999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||+++|+||||||+|||++.+ +.++|+|||+++....+.... .......++..|+|||++.+..
T Consensus 118 ~~l~~lH~~~i~H~dlkp~Nili~~~-----~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~---- 186 (283)
T cd05080 118 EGMAYLHSQHYIHRDLAARNVLLDND-----RLVKIGDFGLAKAVPEGHEYY--RVREDGDSPVFWYAVECLKENK---- 186 (283)
T ss_pred HHHHHHHHCCeeccccChheEEEcCC-----CcEEEeecccccccCCcchhh--ccCCCCCCCceeeCHhHhcccC----
Confidence 99999999999999999999999887 789999999998765422110 0011234667899999986554
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccc---------c---------ccccccCCCCCCccHHHHHHHHHhhhhC
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------D---------YEVNALPQLNTNVPEVMRRLVAKLLEND 492 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------~---------~~~~~~~~~~~~~~~~l~~Li~~~L~~d 492 (588)
.+.++|||||||++|||++|..||....... . ......++.+..+|.++.+++.+||+.|
T Consensus 187 --~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~ 264 (283)
T cd05080 187 --FSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE 264 (283)
T ss_pred --CCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC
Confidence 4578999999999999999999985421100 0 0001122345678899999999999999
Q ss_pred CCCCCCHHHHHHHHhhh
Q psy4039 493 PSDRPSAELAATVCQLY 509 (588)
Q Consensus 493 P~~Rps~~e~l~~L~~~ 509 (588)
|++|||++++++.++.+
T Consensus 265 p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 265 AKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhhCCCHHHHHHHHHHh
Confidence 99999999999977643
No 195
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4e-38 Score=320.99 Aligned_cols=252 Identities=24% Similarity=0.271 Sum_probs=198.5
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. +..||||++....... .....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~---------------~~~~~~~~e~~~l~~~----~~~~i 61 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG---------------GIPNQALREIKALQAC----QHPYV 61 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc---------------hhhHHHHHHHHHHHhC----CCCCC
Confidence 5889999999999999999986 7899999985432111 1223456788899887 79999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.+.. ..++||||++++|.+++......+++.+++.++.|+++||.
T Consensus 62 ~~~~~~~~~~~----------------------------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 113 (286)
T cd07832 62 VKLLDVFPHGS----------------------------GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVA 113 (286)
T ss_pred cceeeEEecCC----------------------------eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 99999987632 48999999988999999876557999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+.+|+|+||||+||+++.+ +.++|+|||++........... ....|+..|+|||++.+... .+
T Consensus 114 ~lH~~~i~H~dl~p~ni~~~~~-----~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~-----~~ 179 (286)
T cd07832 114 YMHANGIMHRDLKPANLLISAD-----GVLKIADFGLARLFSEEEPRLY----SHQVATRWYRAPELLYGARK-----YD 179 (286)
T ss_pred HHHHCCeecCCcCHHHEEEcCC-----CcEEEeeeeecccccCCCCCcc----ccccCcccccCceeeecccc-----CC
Confidence 9999999999999999999987 7899999999987654321111 13468999999999864331 34
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccccc--------cCCCCCCccHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEVNA--------LPQLNTNVPEVMR 482 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~~~--------~~~~~~~~~~~l~ 482 (588)
.++||||+||++|||++|.+||.+...... +.... ........+.++.
T Consensus 180 ~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (286)
T cd07832 180 PGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEAL 259 (286)
T ss_pred chhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHH
Confidence 689999999999999999888754321000 00000 0011235678999
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+++.+||+.||++|||++++++ |||+.
T Consensus 260 ~li~~~l~~~p~~R~~~~~~l~---------h~~~~ 286 (286)
T cd07832 260 DLLKGLLVYDPSKRLSAAEALR---------HPYFT 286 (286)
T ss_pred HHHHHHhccChhhCCCHHHHhh---------CcCcC
Confidence 9999999999999999999999 99973
No 196
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.6e-38 Score=322.49 Aligned_cols=259 Identities=21% Similarity=0.265 Sum_probs=201.2
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDML 261 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~i 261 (588)
..+.+..++|++.+.||+|+||.||++.+. ...+|+|.+..... .. ....+.+|+.+
T Consensus 5 ~~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~---~~-------------~~~~~~~E~~~ 68 (293)
T cd05053 5 PEWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT---EK-------------DLSDLVSEMEM 68 (293)
T ss_pred cccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC---HH-------------HHHHHHHHHHH
Confidence 356677789999999999999999999875 26799999853211 00 11235568888
Q ss_pred HhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-------
Q psy4039 262 MNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER------- 333 (588)
Q Consensus 262 l~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~------- 333 (588)
+..+ .+||||+++++++.+.. .++++|||+ +|+|.+++...
T Consensus 69 l~~l---~~h~~i~~~~~~~~~~~----------------------------~~~li~e~~~~~~L~~~l~~~~~~~~~~ 117 (293)
T cd05053 69 MKMI---GKHKNIINLLGVCTQEG----------------------------PLYVVVEYAAHGNLRDFLRARRPPGEYA 117 (293)
T ss_pred HHhh---cCCCCeeeEEEEEcCCC----------------------------CeEEEEEeCCCCcHHHHHHhcCCCcccc
Confidence 8776 47999999999987632 389999999 68999999742
Q ss_pred --------cCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccc
Q psy4039 334 --------CAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 405 (588)
Q Consensus 334 --------~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 405 (588)
...+++..+..++.|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++.........
T Consensus 118 ~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~-----~~~kL~Dfg~~~~~~~~~~~~--- 189 (293)
T cd05053 118 SPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED-----HVMKIADFGLARDIHHIDYYR--- 189 (293)
T ss_pred ccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC-----CeEEeCcccccccccccccee---
Confidence 2368999999999999999999999999999999999999887 789999999998765422111
Q ss_pred ccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHH
Q psy4039 406 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVM 481 (588)
Q Consensus 406 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l 481 (588)
......+++.|+|||++.+.. ++.++|||||||++|||++ |..||......... .....+..+..++.++
T Consensus 190 ~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05053 190 KTTNGRLPVKWMAPEALFDRV------YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQEL 263 (293)
T ss_pred ccCCCCCCccccCHHHhccCC------cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHH
Confidence 111233567899999986554 4578999999999999997 99998764221111 1122334556788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+|+.+||..||++|||+.++++.|+.
T Consensus 264 ~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 264 YHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 999999999999999999999997764
No 197
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.4e-38 Score=320.84 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=198.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|++.+.||.|+||.||+|.+. ++.||+|.+..... ....+..|+.++..+ .+|||
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~------------------~~~~~~~e~~~l~~~---~~h~~ 74 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED------------------EEEEIKLEINMLKKY---SHHRN 74 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH------------------HHHHHHHHHHHHHHh---cCCCc
Confidence 77899999999999999999996 78999999843110 112345577777776 47999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
|+++++++....+ .+.....+++|||+ +|+|.+++... ...+++..+..++.|+++
T Consensus 75 i~~~~~~~~~~~~----------------------~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 132 (282)
T cd06636 75 IATYYGAFIKKSP----------------------PGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR 132 (282)
T ss_pred EEEEeeehhcccc----------------------cCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence 9999999875321 11233689999999 57999999864 346899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+++|+||||||+||+++.+ +.++|+|||++........ ......|++.|+|||++...... ..
T Consensus 133 al~~LH~~~ivH~dl~~~nili~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~l~~~~~~-~~ 201 (282)
T cd06636 133 GLAHLHAHKVIHRDIKGQNVLLTEN-----AEVKLVDFGVSAQLDRTVG-----RRNTFIGTPYWMAPEVIACDENP-DA 201 (282)
T ss_pred HHHHHHHCCcccCCCCHHHEEECCC-----CCEEEeeCcchhhhhcccc-----CCCcccccccccCHhhcCcccCc-Cc
Confidence 9999999999999999999999987 7899999999876533111 11245689999999998643211 11
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccccc---c-ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV---N-ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~---~-~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.++.++|||||||++|||++|..||........... . ........+|.++.++|.+||+.||.+|||+.++++
T Consensus 202 ~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~--- 278 (282)
T cd06636 202 TYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK--- 278 (282)
T ss_pred CCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc---
Confidence 245689999999999999999999976422211111 1 111123457899999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 279 ------~~~~ 282 (282)
T cd06636 279 ------HPFI 282 (282)
T ss_pred ------CCCC
Confidence 9996
No 198
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-37 Score=317.39 Aligned_cols=250 Identities=20% Similarity=0.274 Sum_probs=193.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|++. ++.||+|++...... ....+.+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---------------~~~~~~~~~e~~~l~~~----~h~~ 61 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD---------------PVIKKIALREIRMLKQL----KHPN 61 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC---------------ccccHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 789999998532110 01223456789999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..+++|||+++ +|..++.. ...+++.++..++.|++.|
T Consensus 62 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~ 112 (286)
T cd07847 62 LVNLIEVFRRKR----------------------------KLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQA 112 (286)
T ss_pred EeeeeeEEeeCC----------------------------EEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHH
Confidence 999999987632 48999999964 55555443 3379999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.++|+|||++........ ......|+..|+|||++.+...
T Consensus 113 l~~LH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~~----- 177 (286)
T cd07847 113 VNFCHKHNCIHRDVKPENILITKQ-----GQIKLCDFGFARILTGPGD-----DYTDYVATRWYRAPELLVGDTQ----- 177 (286)
T ss_pred HHHHHHCCceecCCChhhEEEcCC-----CcEEECccccceecCCCcc-----cccCcccccccCCHHHHhCCCC-----
Confidence 999999999999999999999987 7899999999987644221 0113457889999999865321
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc-----------------------c-cccccCC---------CCCCccH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----------------------Y-EVNALPQ---------LNTNVPE 479 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-----------------------~-~~~~~~~---------~~~~~~~ 479 (588)
++.++|||||||++|||++|..||.+...... + .....+. ....++.
T Consensus 178 ~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (286)
T cd07847 178 YGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISS 257 (286)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCH
Confidence 45689999999999999999999965321000 0 0000000 1135678
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.+.+|+.+||+.||++||++.+++. |||+
T Consensus 258 ~~~~li~~~l~~~p~~Rp~~~eil~---------~~~f 286 (286)
T cd07847 258 PALSFLKGCLQMDPTERLSCEELLE---------HPYF 286 (286)
T ss_pred HHHHHHHHHhcCCccccCCHHHHhc---------CCCC
Confidence 8999999999999999999999999 9996
No 199
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.5e-38 Score=317.03 Aligned_cols=251 Identities=26% Similarity=0.351 Sum_probs=197.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|++. +..||||.+........ .....+.+|+.+++.+ +|||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l----~h~~ 63 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDA--------------KARQDCVKEIDLLKQL----NHPN 63 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCH--------------HHHHHHHHHHHHHHhC----CCcc
Confidence 78999999999999999999985 78999998854221111 0223456789999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~ql 349 (588)
|+++++++.+.. ..+++|||+ +++|.+++.. ....+++..+..++.|+
T Consensus 64 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (267)
T cd08228 64 VIKYLDSFIEDN----------------------------ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115 (267)
T ss_pred eeeeeeeEEECC----------------------------eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHH
Confidence 999999887632 489999999 5799988864 23358999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+++|+||||||+||+++.+ +.++|+|||++........ ......|++.|+|||.+.+..
T Consensus 116 ~~~l~~LH~~~i~H~dl~~~nil~~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~~--- 182 (267)
T cd08228 116 CSAVEHMHSRRVMHRDIKPANVFITAT-----GVVKLGDLGLGRFFSSKTT-----AAHSLVGTPYYMSPERIHENG--- 182 (267)
T ss_pred HHHHHHHhhCCeeCCCCCHHHEEEcCC-----CCEEECccccceeccchhH-----HHhcCCCCccccChhhhccCC---
Confidence 999999999999999999999999887 7899999999887543211 111346889999999987654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccc-c----ccccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT-D----YEVNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-~----~~~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++||||||+++|||++|+.||....... . ......++. ...++..+.+++.+||+.+|++||++.+++
T Consensus 183 ---~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl 259 (267)
T cd08228 183 ---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVH 259 (267)
T ss_pred ---CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHH
Confidence 3467999999999999999999997642211 1 111122222 345778899999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.++.
T Consensus 260 ~~~~~ 264 (267)
T cd08228 260 QIAKQ 264 (267)
T ss_pred HHHHH
Confidence 87763
No 200
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.1e-38 Score=314.15 Aligned_cols=246 Identities=22% Similarity=0.289 Sum_probs=200.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..||+|.+.... ....+.+|+.+++.+ +|||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------------------~~~~~~~e~~~~~~l----~~~~ 59 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-------------------DLQEIIKEISILKQC----DSPY 59 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-------------------HHHHHHHHHHHHHhC----CCCc
Confidence 78999999999999999999997 6899999984210 024566789998887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..|+++||+ +++|.+++......+++..+..++.|+++|
T Consensus 60 i~~~~~~~~~~~----------------------------~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~ 111 (256)
T cd06612 60 IVKYYGSYFKNT----------------------------DLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKG 111 (256)
T ss_pred EeeeeeeeecCC----------------------------cEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHH
Confidence 999999987632 489999999 579999998766689999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+||||+|+||+++.+ +.++|+|||++........ ......|+..|+|||++.+..
T Consensus 112 l~~lh~~~i~H~dl~~~ni~~~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~------ 175 (256)
T cd06612 112 LEYLHSNKKIHRDIKAGNILLNEE-----GQAKLADFGVSGQLTDTMA-----KRNTVIGTPFWMAPEVIQEIG------ 175 (256)
T ss_pred HHHHHHCCcccCCCCcceEEECCC-----CcEEEcccccchhcccCcc-----ccccccCCccccCHHHHhcCC------
Confidence 999999999999999999999987 7899999999987644221 111345889999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc-----cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV-----NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~-----~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|+|++|+.||........... ......+..++.++.+++.+||+.||++|||+++++.
T Consensus 176 ~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~--- 252 (256)
T cd06612 176 YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ--- 252 (256)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc---
Confidence 45789999999999999999999976322111110 1111223457789999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 253 ------~~~~ 256 (256)
T cd06612 253 ------HPFI 256 (256)
T ss_pred ------CCCC
Confidence 9996
No 201
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.1e-38 Score=325.54 Aligned_cols=261 Identities=22% Similarity=0.268 Sum_probs=200.3
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--Ce--eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GV--EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~--~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
+.+++|++.+.||+|+||.||+|.++ +. .+|+|.+..... ......+.+|+.++.++
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~----------------~~~~~~~~~Ei~~l~~l--- 64 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS----------------KDDHRDFAGELEVLCKL--- 64 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC----------------HHHHHHHHHHHHHHHHh---
Confidence 45689999999999999999999975 33 567777642110 00223456688888776
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-------------
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC------------- 334 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~------------- 334 (588)
.+||||+++++++.+.. ..|++|||+ +++|.+++....
T Consensus 65 ~~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 116 (303)
T cd05088 65 GHHPNIINLLGACEHRG----------------------------YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 116 (303)
T ss_pred cCCCCcceEEEEECCCC----------------------------CceEEEEeCCCCcHHHHHHhccccccccccccccc
Confidence 57999999999987531 389999999 689999997542
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccC
Q psy4039 335 --AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 412 (588)
Q Consensus 335 --~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~G 412 (588)
..+++.+++.++.|++.||+|||++||+||||||+|||++.+ +.+||+|||+++....... .....+
T Consensus 117 ~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~-----~~~kl~dfg~~~~~~~~~~------~~~~~~ 185 (303)
T cd05088 117 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN-----YVAKIADFGLSRGQEVYVK------KTMGRL 185 (303)
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC-----CcEEeCccccCcccchhhh------cccCCC
Confidence 257899999999999999999999999999999999999987 7899999999864322110 112234
Q ss_pred CccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc---ccccCCCCCCccHHHHHHHHHh
Q psy4039 413 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE---VNALPQLNTNVPEVMRRLVAKL 488 (588)
Q Consensus 413 T~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~Li~~~ 488 (588)
+..|+|||++.+.. .+.++|||||||++|||++ |..||.......... .......+..+++++.+++.+|
T Consensus 186 ~~~y~aPE~~~~~~------~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 259 (303)
T cd05088 186 PVRWMAIESLNYSV------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC 259 (303)
T ss_pred cccccCHHHHhccC------CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHH
Confidence 67899999986654 4578999999999999998 999997542221111 1112234456789999999999
Q ss_pred hhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 489 LENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 489 L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
|+.+|++||++++++..+...++..+.|.
T Consensus 260 l~~~p~~Rp~~~~il~~l~~~~~~~~~~~ 288 (303)
T cd05088 260 WREKPYERPSFAQILVSLNRMLEERKTYV 288 (303)
T ss_pred cCCChhhCcCHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999998887766555443
No 202
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.1e-38 Score=332.51 Aligned_cols=259 Identities=22% Similarity=0.282 Sum_probs=199.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||.+...... .....+.+|+.+++.+ +|||
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h~n 64 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ----------------TFCQRTLREIKILRRF----KHEN 64 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccc----------------hhHHHHHHHHHHHHhC----CCCC
Confidence 78999999999999999999886 789999998431110 0122345688899887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.... ......+|++|||+.++|.+++... .+++..+..++.|+++||
T Consensus 65 iv~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL 119 (336)
T cd07849 65 IIGILDIIRPPS-----------------------FESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGL 119 (336)
T ss_pred cCchhheeeccc-----------------------ccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 999999876531 1122358999999998999888654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+|||++.+ +.+||+|||+++........ ........||+.|+|||++.+... .
T Consensus 120 ~~LH~~~ivH~dlkp~Nill~~~-----~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-----~ 187 (336)
T cd07849 120 KYIHSANVLHRDLKPSNLLLNTN-----CDLKICDFGLARIADPEHDH--TGFLTEYVATRWYRAPEIMLNSKG-----Y 187 (336)
T ss_pred HHHHhCCeeccCCCHHHEEECCC-----CCEEECcccceeeccccccc--cCCcCCcCcCCCccChHHhhCCCC-----C
Confidence 99999999999999999999987 78999999999875432211 111124578999999998754321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc---------------ccc-----------c--ccc-----CCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------------DYE-----------V--NAL-----PQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------------~~~-----------~--~~~-----~~~~~~~~~~ 480 (588)
+.++||||+||++|+|++|+.||.+..... ... . ... ......++++
T Consensus 188 ~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (336)
T cd07849 188 TKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPK 267 (336)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcH
Confidence 468999999999999999999996531100 000 0 000 0011345788
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+.++|.+||+.||++|||+.++++ |||++..
T Consensus 268 ~~~li~~~l~~dP~~Rpt~~e~l~---------hp~~~~~ 298 (336)
T cd07849 268 ALDLLDKMLTFNPHKRITVEEALA---------HPYLEQY 298 (336)
T ss_pred HHHHHHHHcCCChhhCcCHHHHhc---------Ccccccc
Confidence 999999999999999999999999 9999844
No 203
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.6e-38 Score=319.31 Aligned_cols=255 Identities=20% Similarity=0.253 Sum_probs=199.4
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|++..++|.+.+.||+|+||.||+|.+. +..||+|.+.... ... ....+.+|+.+++
T Consensus 1 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~---~~~-------------~~~~~~~e~~~l~ 64 (277)
T cd05032 1 WELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA---SMR-------------ERIEFLNEASVMK 64 (277)
T ss_pred CccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc---CHH-------------HHHHHHHHHHHHH
Confidence 4566789999999999999999999886 3679999974321 100 1123556888888
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
.+ +||||+++++++.+.. ..++||||+ +|+|.+++....
T Consensus 65 ~~----~~~~i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~ 112 (277)
T cd05032 65 EF----NCHHVVRLLGVVSTGQ----------------------------PTLVVMELMAKGDLKSYLRSRRPEAENNPG 112 (277)
T ss_pred hC----CCCceeEEEEEEcCCC----------------------------CcEEEEecCCCCCHHHHHHhcccchhhccC
Confidence 87 8999999999987632 389999999 589999997531
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCC
Q psy4039 335 -AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 413 (588)
Q Consensus 335 -~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT 413 (588)
..+++..+..++.|++.||.|||+.+|+||||||+|||++.+ +.+||+|||+++......... ......+|
T Consensus 113 ~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~-----~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~ 184 (277)
T cd05032 113 LGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED-----LTVKIGDFGMTRDIYETDYYR---KGGKGLLP 184 (277)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC-----CCEEECCcccchhhccCcccc---cCCCCCcc
Confidence 247888999999999999999999999999999999999988 889999999997654321111 11234578
Q ss_pred ccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhh
Q psy4039 414 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 414 ~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
..|+|||.+.... .+.++|||||||++||+++ |..||........ ......+..+..++.++.+++.+||
T Consensus 185 ~~y~aPE~~~~~~------~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 258 (277)
T cd05032 185 VRWMAPESLKDGV------FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCW 258 (277)
T ss_pred ccccCHHHHhcCC------CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHc
Confidence 8999999986544 4578999999999999998 8999865322111 1122334556778999999999999
Q ss_pred hhCCCCCCCHHHHHHHHh
Q psy4039 490 ENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~ 507 (588)
+.+|++|||+.++++.|+
T Consensus 259 ~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 259 QYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCChhhCCCHHHHHHHhc
Confidence 999999999999988654
No 204
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7e-38 Score=316.78 Aligned_cols=256 Identities=21% Similarity=0.240 Sum_probs=195.6
Q ss_pred eEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
|++++.||+|+||.||+|.+. +..||||.+...... .. ....+.+|+.+++.+ +||
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~---~~------------~~~~~~~e~~~l~~l----~h~ 61 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT---YS------------EIEEFLSEAACMKDF----DHP 61 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC---HH------------HHHHHHHHHHHHHhC----CCC
Confidence 567889999999999999875 367999998532111 00 112356688888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-----cCCCCHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-----CAQLSMHERVLLF 346 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-----~~~l~~~~~~~i~ 346 (588)
||+++++++.+.. ........+++|||+ +|+|..++... ...+++..+..++
T Consensus 62 ~iv~~~~~~~~~~----------------------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 119 (273)
T cd05035 62 NVMKLIGVCFEAS----------------------SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM 119 (273)
T ss_pred CeeeEEeeeccCC----------------------ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHH
Confidence 9999999876532 111223479999999 68999998653 1368999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||.|||+++|+||||||+||+++++ +.+||+|||+++.......... .....++..|+|||++.+..
T Consensus 120 ~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~-----~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~~~~~ 191 (273)
T cd05035 120 VDIALGMEYLSNRNFIHRDLAARNCMLRED-----MTVCVADFGLSKKIYSGDYYRQ---GRIAKMPVKWIAIESLADRV 191 (273)
T ss_pred HHHHHHHHHHHhCCeeccccchheEEECCC-----CeEEECCccceeeccccccccc---cccccCCccccCHhhcccCC
Confidence 999999999999999999999999999987 7899999999987544221111 11233567899999986554
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|||||||++|||++ |..||.+....... .....+..+..+++++.+++.+||+.||.+|||+.++
T Consensus 192 ------~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~ 265 (273)
T cd05035 192 ------YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKL 265 (273)
T ss_pred ------CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 4578999999999999999 88998663221111 1122334567789999999999999999999999999
Q ss_pred HHHHhh
Q psy4039 503 ATVCQL 508 (588)
Q Consensus 503 l~~L~~ 508 (588)
+..|+.
T Consensus 266 ~~~l~~ 271 (273)
T cd05035 266 REVLEN 271 (273)
T ss_pred HHHHHh
Confidence 997764
No 205
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.2e-38 Score=322.23 Aligned_cols=252 Identities=20% Similarity=0.246 Sum_probs=197.8
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
..++|.+.+.||+|+||.||+|.+. +..||||.+..... . ...+.+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~---~-------------~~~~~~~~e~~~l~~l- 65 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS---N-------------DARKDFEREAELLTNF- 65 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC---H-------------HHHHHHHHHHHHHHhc-
Confidence 3477899999999999999999874 46899999843211 0 0124566789999887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----------
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----------- 334 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----------- 334 (588)
+||||+++++++.+. ...+++|||+ +++|.+++...+
T Consensus 66 ---~~~~i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 114 (280)
T cd05049 66 ---QHENIVKFYGVCTEG----------------------------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDS 114 (280)
T ss_pred ---CCCCchheeeEEecC----------------------------CCeEEEEecCCCCCHHHHHHhcCCchhhhccccc
Confidence 899999999998763 1489999999 689999997542
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccC
Q psy4039 335 --AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGG 412 (588)
Q Consensus 335 --~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~G 412 (588)
..+++.++..++.|++.||.|||++||+||||||+||+++.+ +.+||+|||+++......... ......+
T Consensus 115 ~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~-----~~~kl~d~g~~~~~~~~~~~~---~~~~~~~ 186 (280)
T cd05049 115 PMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD-----LVVKIGDFGMSRDVYTTDYYR---VGGHTML 186 (280)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC-----CeEEECCcccceecccCccee---cCCCCcc
Confidence 247899999999999999999999999999999999999988 899999999997643321111 1113346
Q ss_pred CccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHh
Q psy4039 413 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKL 488 (588)
Q Consensus 413 T~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~ 488 (588)
++.|+|||++.+.. ++.++|||||||++|||++ |..||......... .....+..+..++..+++++.+|
T Consensus 187 ~~~y~aPE~~~~~~------~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 260 (280)
T cd05049 187 PIRWMPPESIMYRK------FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGC 260 (280)
T ss_pred cceecChhhhccCC------cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence 78999999997655 4578999999999999998 99998763222111 12223344567899999999999
Q ss_pred hhhCCCCCCCHHHHHHHHh
Q psy4039 489 LENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 489 L~~dP~~Rps~~e~l~~L~ 507 (588)
|+.||++||++.++++.|+
T Consensus 261 l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 261 WKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCCcccCCCHHHHHHHhh
Confidence 9999999999999988654
No 206
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.8e-38 Score=320.15 Aligned_cols=254 Identities=22% Similarity=0.233 Sum_probs=197.4
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||+|+||.||+|.+. +..+|+|.+.... .. ....+.+|+.+++.+ +||||+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-----~~------------~~~~~~~e~~~l~~l----~h~~ii 65 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-----EE------------ELEDYMVEIDILASC----DHPNIV 65 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-----HH------------HHHHHHHHHHHHHHC----CCCCee
Confidence 577888999999999999997 6788999984211 00 123455688888887 999999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++|.+.. ..++||||+ +++|..++......+++..+..++.|+++||.
T Consensus 66 ~~~~~~~~~~----------------------------~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~ 117 (282)
T cd06643 66 KLLDAFYYEN----------------------------NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALN 117 (282)
T ss_pred eEEEEEeeCC----------------------------EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999887631 489999999 57898888765457999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+.||+||||||+|||++.+ +.++|+|||++........ ......||+.|+|||++...... ...++
T Consensus 118 ~LH~~~i~H~dlkp~nili~~~-----~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~-~~~~~ 186 (282)
T cd06643 118 YLHENKIIHRDLKAGNILFTLD-----GDIKLADFGVSAKNTRTIQ-----RRDSFIGTPYWMAPEVVMCETSK-DRPYD 186 (282)
T ss_pred HHHHCCeeecCCCcccEEEccC-----CCEEEcccccccccccccc-----ccccccccccccCHhhccccCCC-CCCCC
Confidence 9999999999999999999887 7899999999876433211 11135689999999998533211 11144
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccccc---ccc--ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~--~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.++|||||||++|||++|.+||......... ... .....+..++.+++++|.+||+.||++||+++++++
T Consensus 187 ~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~----- 261 (282)
T cd06643 187 YKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ----- 261 (282)
T ss_pred ccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc-----
Confidence 6899999999999999999999753221111 001 111234568899999999999999999999999998
Q ss_pred hhcCCccccCC
Q psy4039 510 LWAPKHWLYGA 520 (588)
Q Consensus 510 ~~~~h~w~~~~ 520 (588)
|||+...
T Consensus 262 ----~~~~~~~ 268 (282)
T cd06643 262 ----HPFVTVN 268 (282)
T ss_pred ----CCCEecc
Confidence 9999843
No 207
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5e-38 Score=318.16 Aligned_cols=256 Identities=21% Similarity=0.296 Sum_probs=196.7
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--C---eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--G---VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g---~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
...+|++.+.||+|+||.||+|.+. + ..||||++.... .. .....+..|+.+++.+
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~---~~-------------~~~~~~~~e~~~l~~l--- 62 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY---TE-------------KQRRDFLSEASIMGQF--- 62 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC---CH-------------HHHHHHHHHHHHHHhC---
Confidence 3467999999999999999999986 2 369999984321 10 0123466788888887
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
.||||+++++++.+.. ..++||||+ +++|.+++......+++.+++.++.
T Consensus 63 -~h~ni~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 113 (269)
T cd05065 63 -DHPNIIHLEGVVTKSR----------------------------PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR 113 (269)
T ss_pred -CCcCcceEEEEECCCC----------------------------ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHH
Confidence 8999999999886532 389999999 5799999987655799999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||++|++||||||+||+++.+ +.+||+|||+++..................++..|+|||++.+..
T Consensus 114 ~l~~al~~lH~~g~~H~dl~p~nili~~~-----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~- 187 (269)
T cd05065 114 GIAAGMKYLSEMNYVHRDLAARNILVNSN-----LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK- 187 (269)
T ss_pred HHHHHHHHHHHCCEeecccChheEEEcCC-----CcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCc-
Confidence 99999999999999999999999999877 789999999987654422211111001111245799999987554
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||......... ......+.+..+|..+.+++.+||..+|++||++++++
T Consensus 188 -----~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 262 (269)
T cd05065 188 -----FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIV 262 (269)
T ss_pred -----ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 4568999999999999886 99999763221111 11112233467889999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
..|+.
T Consensus 263 ~~l~~ 267 (269)
T cd05065 263 STLDK 267 (269)
T ss_pred HHHHh
Confidence 87663
No 208
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.2e-38 Score=318.07 Aligned_cols=256 Identities=21% Similarity=0.228 Sum_probs=192.6
Q ss_pred eEEeeeecccCceeEEEEEEC--C--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--G--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
|.+++.||+|+||.||+|.+. + ..||||.++...... . ..+.+.+|+.+++.+ +|||
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~---~------------~~~~~~~E~~~l~~l----~h~~ 61 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR---S------------EMEDFLSEAVCMKEF----DHPN 61 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH---H------------HHHHHHHHHHHHHhC----CCCC
Confidence 356789999999999999986 2 369999885321110 0 123455688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-----cCCCCHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-----CAQLSMHERVLLFT 347 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-----~~~l~~~~~~~i~~ 347 (588)
|+++++++..... .......+++|||+ +|+|.+++... ...+++..+..++.
T Consensus 62 iv~~~~~~~~~~~----------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (272)
T cd05075 62 VMRLIGVCLQTVE----------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMT 119 (272)
T ss_pred cceEEEEEccCCc----------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHH
Confidence 9999998765321 01112378999999 58999988532 23589999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++....+.... ......+++.|+|||++.+..
T Consensus 120 ~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~- 190 (272)
T cd05075 120 DIASGMEYLSSKSFIHRDLAARNCMLNEN-----MNVCVADFGLSKKIYNGDYYR---QGRIAKMPVKWIAIESLADRV- 190 (272)
T ss_pred HHHHHHHHHHHCCeeccccchhheEEcCC-----CCEEECCCCcccccCccccee---cCCcccCCcccCCHHHccCCC-
Confidence 99999999999999999999999999877 789999999998764422111 111234677899999987654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
++.++|||||||++|||++ |..||........ .........+..++..+.+++.+||+.||++|||+++++
T Consensus 191 -----~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~ 265 (272)
T cd05075 191 -----YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLR 265 (272)
T ss_pred -----cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 4578999999999999999 7899865322111 111222344567889999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 266 ~~l~~ 270 (272)
T cd05075 266 CELEK 270 (272)
T ss_pred HHHHh
Confidence 87663
No 209
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.3e-37 Score=319.04 Aligned_cols=260 Identities=24% Similarity=0.291 Sum_probs=199.6
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.+.||+|+||.||++... ++.+|+|.+.... . ....+.+|+.+++.+ .+||
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~---------------~~~~~~~e~~~l~~l---~~h~ 79 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---D---------------VDEEIEAEYNILQSL---PNHP 79 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---c---------------HHHHHHHHHHHHHHh---cCCC
Confidence 388999999999999999999986 7899999984311 0 112345677887776 5799
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQ 348 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~q 348 (588)
||+++++++..... ......++||||+ +++|.++++. ....+++..++.++.|
T Consensus 80 ni~~~~~~~~~~~~-----------------------~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~q 136 (291)
T cd06639 80 NVVKFYGMFYKADK-----------------------LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYG 136 (291)
T ss_pred CeEEEEEEEEeccc-----------------------cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHH
Confidence 99999999876321 1122489999999 6799998864 2347899999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||.|||+.+|+||||||+||+++.+ +.+||+|||++......... .....|+..|+|||++.....
T Consensus 137 i~~al~~lH~~~ivH~dlkp~nili~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~- 205 (291)
T cd06639 137 ALLGLQHLHNNRIIHRDVKGNNILLTTE-----GGVKLVDFGVSAQLTSTRLR-----RNTSVGTPFWMAPEVIACEQQ- 205 (291)
T ss_pred HHHHHHHHHhCCeeccCCCHHHEEEcCC-----CCEEEeecccchhccccccc-----ccCccCCccccChhhhcCCCC-
Confidence 9999999999999999999999999887 78999999998765432111 113468899999999864321
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccC--CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALP--QLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~--~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.....+.++|||||||++|||++|+.||......... .....+ ..+..++.++.++|.+||+.||++||++.+++
T Consensus 206 ~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 285 (291)
T cd06639 206 YDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLL 285 (291)
T ss_pred cccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 1112457899999999999999999999763221111 111111 12345678899999999999999999999999
Q ss_pred HHHhhhhhcCCcccc
Q psy4039 504 TVCQLYLWAPKHWLY 518 (588)
Q Consensus 504 ~~L~~~~~~~h~w~~ 518 (588)
+ |||++
T Consensus 286 ~---------~~~~~ 291 (291)
T cd06639 286 E---------HPFIK 291 (291)
T ss_pred c---------CcccC
Confidence 9 99984
No 210
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.4e-38 Score=321.62 Aligned_cols=254 Identities=26% Similarity=0.295 Sum_probs=199.3
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+++|++.+.||.|+||.||+|.+. ++.||||.++...... .....+.+|+.++..+ +||
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~h~ 64 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE---------------GFPITSLREINILLKL----QHP 64 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc---------------cchhhHHHHHHHHHhc----CCC
Confidence 378999999999999999999997 7899999985322110 0122345688888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.+.. ....|++|||++++|.+++......+++.++..++.|+++|
T Consensus 65 ni~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~a 118 (293)
T cd07843 65 NIVTVKEVVVGSN--------------------------LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSG 118 (293)
T ss_pred CEEEEEEEEEecC--------------------------CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 9999999887531 12499999999889999998765579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+|||++.+ +.++|+|||+++........ .....+++.|+|||++.+...
T Consensus 119 L~~LH~~~i~H~dl~p~nili~~~-----~~~~l~d~g~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~----- 183 (293)
T cd07843 119 VAHLHDNWILHRDLKTSNLLLNNR-----GILKICDFGLAREYGSPLKP-----YTQLVVTLWYRAPELLLGAKE----- 183 (293)
T ss_pred HHHHHHCCeeeccCCHHHEEECCC-----CcEEEeecCceeeccCCccc-----cccccccccccCchhhcCCcc-----
Confidence 999999999999999999999987 78999999999876543211 113457889999999865432
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc-----------------------------cc----cccCCCCCC-cc
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----------------------------EV----NALPQLNTN-VP 478 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----------------------------~~----~~~~~~~~~-~~ 478 (588)
.+.++||||+|+++|||++|.+||......... .. .....++.. ++
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd07843 184 YSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLS 263 (293)
T ss_pred ccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCC
Confidence 346899999999999999999999653110000 00 001112222 58
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+.+.++|++||+.||++|||+.|+++ |||+
T Consensus 264 ~~~~~li~~~l~~~p~~R~t~~ell~---------~~~f 293 (293)
T cd07843 264 DNGFDLLNRLLTYDPAKRISAEDALK---------HPYF 293 (293)
T ss_pred hHHHHHHHHHhccCccccCCHHHHhc---------CCCC
Confidence 88999999999999999999999999 9996
No 211
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.4e-37 Score=317.61 Aligned_cols=260 Identities=21% Similarity=0.253 Sum_probs=198.3
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
..++|++.+.||+|+||.||+|.+. +..||+|.+.... . ....+.+|+.++..+ .+|
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~---------------~~~~~~~e~~~l~~l---~~h 74 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---D---------------IDEEIEAEYNILKAL---SDH 74 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---c---------------hHHHHHHHHHHHHHH---hcC
Confidence 3488999999999999999999886 7899999874211 0 112345688888776 469
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFT 347 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ 347 (588)
|||+++++++.... .......+++|||+ +++|.+++... ...+++..+..++.
T Consensus 75 ~~i~~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 131 (286)
T cd06638 75 PNVVKFYGMYYKKD-----------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILH 131 (286)
T ss_pred CCeeeeeeeeeecc-----------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHH
Confidence 99999999886421 11123599999999 67999988642 34689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|+++||.|||+++|+||||||+||+++.+ +.++|+|||+++........ .....||+.|+|||++.....
T Consensus 132 ~i~~~l~~lH~~~i~H~dlkp~nili~~~-----~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~ 201 (286)
T cd06638 132 EALMGLQHLHVNKTIHRDVKGNNILLTTE-----GGVKLVDFGVSAQLTSTRLR-----RNTSVGTPFWMAPEVIACEQQ 201 (286)
T ss_pred HHHHHHHHHHhCCccccCCCHHhEEECCC-----CCEEEccCCceeecccCCCc-----cccccCCCcccChhhhchhhh
Confidence 99999999999999999999999999987 78999999999765432111 113468999999999864221
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---ccc--cCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNA--LPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~--~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
....++.++||||+||++|||++|+.||.......... ... ....+..++.++.+++.+||+.||++|||+.++
T Consensus 202 -~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el 280 (286)
T cd06638 202 -LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDL 280 (286)
T ss_pred -ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHH
Confidence 11114578999999999999999999997642211111 111 111234567899999999999999999999999
Q ss_pred HHHHhhhhhcCCccc
Q psy4039 503 ATVCQLYLWAPKHWL 517 (588)
Q Consensus 503 l~~L~~~~~~~h~w~ 517 (588)
++ |+|+
T Consensus 281 l~---------~~~~ 286 (286)
T cd06638 281 LQ---------HVFI 286 (286)
T ss_pred hh---------cccC
Confidence 99 9986
No 212
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.2e-38 Score=332.32 Aligned_cols=260 Identities=22% Similarity=0.257 Sum_probs=199.8
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
|++..++|++.+.||+|+||+||+|.+. ++.||||+++..... . ....+.+|+.++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~--------------~~~~~~~E~~~l~ 65 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--S--------------EHRALMSELKILI 65 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--H--------------HHHHHHHHHHHHH
Confidence 6677789999999999999999999853 678999998532110 0 1123556888888
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------- 334 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------- 334 (588)
.+ .+||||+++++++.... ..++++|||+ +|+|.+++....
T Consensus 66 ~l---~~h~niv~~~~~~~~~~---------------------------~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~ 115 (343)
T cd05103 66 HI---GHHLNVVNLLGACTKPG---------------------------GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKT 115 (343)
T ss_pred hc---cCCccHhhhcceeecCC---------------------------CceEEEEeccCCCcHHHHHHhcCCccccccc
Confidence 77 47899999999876521 1388999999 689999987531
Q ss_pred ----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHHH
Q psy4039 335 ----------------------------------------------------------AQLSMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 335 ----------------------------------------------------------~~l~~~~~~~i~~ql~~gL~yL 356 (588)
..+++..+..++.|+++||.||
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l 195 (343)
T cd05103 116 KDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFL 195 (343)
T ss_pred cccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 1367888999999999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCc
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 436 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~k 436 (588)
|+++|+||||||+|||++.+ +.+||+|||+++......... ......+++.|+|||++.+.. ++.+
T Consensus 196 H~~~i~H~dikp~Nil~~~~-----~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~ 261 (343)
T cd05103 196 ASRKCIHRDLAARNILLSEN-----NVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPETIFDRV------YTIQ 261 (343)
T ss_pred HhCCeecCCCccCeEEEcCC-----CcEEEEecccccccccCcchh---hcCCCCCCcceECcHHhcCCC------CCch
Confidence 99999999999999999977 789999999997653321111 111234677899999986554 4578
Q ss_pred CchhhHHHHHHHHhc-CCCCCccccccc----cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 437 SDAWTAGTVAYEIFG-HDNPFYQSARNT----DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 437 sDVwS~Gvil~Ellt-G~~Pf~~~~~~~----~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
+|||||||++|||++ |..||....... ..........+..+++++.+++.+||+.||++|||+.++++.|+..+
T Consensus 262 ~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 262 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred hhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999999999999996 899986532111 11122233445567889999999999999999999999999887554
No 213
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5.2e-38 Score=337.38 Aligned_cols=261 Identities=22% Similarity=0.260 Sum_probs=203.0
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM 260 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~ 260 (588)
...|++..++|.+++.||+|+||.||+|++. +..||||++...... . ..+.+.+|+.
T Consensus 29 ~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~---------------~~~~~~~E~~ 92 (401)
T cd05107 29 DSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-S---------------EKQALMSELK 92 (401)
T ss_pred CCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-h---------------HHHHHHHHHH
Confidence 4568888899999999999999999999975 358999999532110 0 1224567999
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----- 334 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----- 334 (588)
++..+ ..|||||+++++|.... .+++||||+ +|+|.++++...
T Consensus 93 ~l~~l---~~H~niv~~~~~~~~~~----------------------------~~~iv~E~~~~g~L~~~l~~~~~~~~~ 141 (401)
T cd05107 93 IMSHL---GPHLNIVNLLGACTKGG----------------------------PIYIITEYCRYGDLVDYLHRNKHTFLQ 141 (401)
T ss_pred HHHhc---CCCCCeEEEEEEEccCC----------------------------CcEEEEeccCCCcHHHHHHhccccchh
Confidence 99887 34999999999987632 389999999 689999997531
Q ss_pred --------------------------------------------------------------------------------
Q psy4039 335 -------------------------------------------------------------------------------- 334 (588)
Q Consensus 335 -------------------------------------------------------------------------------- 334 (588)
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (401)
T cd05107 142 YYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAP 221 (401)
T ss_pred hhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccC
Confidence
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc
Q psy4039 335 ------------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ 402 (588)
Q Consensus 335 ------------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~ 402 (588)
..+++..+..++.|++.||.|||+++|+||||||+|||++.+ ..+||+|||+++.........
T Consensus 222 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~-----~~~kL~DfGla~~~~~~~~~~ 296 (401)
T cd05107 222 ERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEG-----KLVKICDFGLARDIMRDSNYI 296 (401)
T ss_pred CCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCC-----CEEEEEecCcceecccccccc
Confidence 136778889999999999999999999999999999999977 789999999998653321111
Q ss_pred cccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc----ccccccCCCCCCc
Q psy4039 403 YSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD----YEVNALPQLNTNV 477 (588)
Q Consensus 403 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~----~~~~~~~~~~~~~ 477 (588)
......|++.|||||++.+.. .+.++|||||||++|||++ |..||........ ......+..+..+
T Consensus 297 ---~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~ 367 (401)
T cd05107 297 ---SKGSTFLPLKWMAPESIFNNL------YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHA 367 (401)
T ss_pred ---cCCCcCCCCceeChHHhcCCC------CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCC
Confidence 111345788999999997654 4578999999999999998 8899865322111 1112233456678
Q ss_pred cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 478 PEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 478 ~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++.+++.+||+.+|.+||++++++..|+..
T Consensus 368 ~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 368 SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999999987643
No 214
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.4e-38 Score=317.41 Aligned_cols=252 Identities=24% Similarity=0.286 Sum_probs=203.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||.|+||.||+|.+. +..||+|++...... .....+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 60 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE----------------DEIEDIQQEIQFLSQC----RSPY 60 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc----------------hHHHHHHHHHHHHHHc----CCCC
Confidence 46888899999999999999986 789999998432100 0123356688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+. ..+++|+||+ +++|.+++... .+++..+..++.|++.|
T Consensus 61 i~~~~~~~~~~----------------------------~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~ 110 (274)
T cd06609 61 ITKYYGSFLKG----------------------------SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLG 110 (274)
T ss_pred eeeeeEEEEEC----------------------------CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHH
Confidence 99999988763 2499999999 57999999876 89999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||+|+||+++++ +.++|+|||+++....... ......|++.|+|||++.+..
T Consensus 111 l~~lh~~~i~h~dl~p~ni~i~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~------ 174 (274)
T cd06609 111 LEYLHEEGKIHRDIKAANILLSEE-----GDVKLADFGVSGQLTSTMS-----KRNTFVGTPFWMAPEVIKQSG------ 174 (274)
T ss_pred HHHHHhCCcccCCCCHHHEEECCC-----CCEEEcccccceeeccccc-----ccccccCCccccChhhhccCC------
Confidence 999999999999999999999987 7899999999987654321 112456889999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCC-ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTN-VPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~-~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+.++|||||||++|+|++|..||........ ......+.++.. +++++.+++.+||..||++|||++++++
T Consensus 175 ~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~---- 250 (274)
T cd06609 175 YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK---- 250 (274)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh----
Confidence 45789999999999999999999965321111 111223333334 8899999999999999999999999999
Q ss_pred hhhcCCccccCCCC
Q psy4039 509 YLWAPKHWLYGATP 522 (588)
Q Consensus 509 ~~~~~h~w~~~~~~ 522 (588)
|||+.....
T Consensus 251 -----~~~~~~~~~ 259 (274)
T cd06609 251 -----HKFIKKAKK 259 (274)
T ss_pred -----ChhhcCCCc
Confidence 999985443
No 215
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2e-37 Score=313.01 Aligned_cols=257 Identities=22% Similarity=0.290 Sum_probs=199.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|++++.||+|+||.||+|.+. +..||||.+........... ..+.+.+|+.+++.+ .|||
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~------------~~~~~~~E~~~l~~l----~h~~ 65 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSK------------EVNALECEIQLLKNL----LHER 65 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHH------------HHHHHHHHHHHHHhc----CCCC
Confidence 67999999999999999999986 78999999853221111100 123456688999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ...++++|||+ +++|.+++.... .+++..+..++.|++.|
T Consensus 66 i~~~~~~~~~~~--------------------------~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~ 118 (265)
T cd06652 66 IVQYYGCLRDPM--------------------------ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEG 118 (265)
T ss_pred eeeEEeEeccCC--------------------------CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999876521 12488999999 579999998654 68999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+|+||||+||+++.+ +.++|+|||+++........ ........||..|+|||++.+..
T Consensus 119 l~~lH~~~i~H~dl~p~nil~~~~-----~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~------ 185 (265)
T cd06652 119 VSYLHSNMIVHRDIKGANILRDSV-----GNVKLGDFGASKRLQTICLS--GTGMKSVTGTPYWMSPEVISGEG------ 185 (265)
T ss_pred HHHHHhCCEecCCCCHHHEEecCC-----CCEEECcCcccccccccccc--ccccccCCCCccccChhhhcCCC------
Confidence 999999999999999999999987 78999999999765431110 01112356899999999987543
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+.++|||||||++|||++|+.||......... .....+..+..++..+.+++.+||. +|.+||+++++++
T Consensus 186 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~---- 260 (265)
T cd06652 186 YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR---- 260 (265)
T ss_pred CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc----
Confidence 457899999999999999999999753211111 1112234556677889999999995 9999999999998
Q ss_pred hhhcCCcccc
Q psy4039 509 YLWAPKHWLY 518 (588)
Q Consensus 509 ~~~~~h~w~~ 518 (588)
|||+.
T Consensus 261 -----~~~~~ 265 (265)
T cd06652 261 -----HTFVH 265 (265)
T ss_pred -----CcccC
Confidence 99973
No 216
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6.6e-38 Score=321.42 Aligned_cols=249 Identities=25% Similarity=0.361 Sum_probs=202.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. ++.||||++....... ......+.+|+.+++.+ .|||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~--------------~~~~~~~~~e~~~l~~l----~h~~ 62 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK--------------LKQVEHVLNEKRILQSI----RHPF 62 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh--------------hhHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 7899999985321100 01123456789999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .++++|||+ +++|.+++.... .+++..+..++.|+++|
T Consensus 63 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~ 113 (290)
T cd05580 63 LVNLYGSFQDDS----------------------------NLYLVMEYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLA 113 (290)
T ss_pred ccceeeEEEcCC----------------------------eEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999887631 489999999 789999998764 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||+|+|||++.+ +.+||+|||+++..... .....|++.|+|||.+.+..
T Consensus 114 l~~lH~~~i~H~dl~p~nili~~~-----~~~kl~dfg~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~------ 174 (290)
T cd05580 114 LEYLHSLDIVYRDLKPENLLLDSD-----GYIKITDFGFAKRVKGR--------TYTLCGTPEYLAPEIILSKG------ 174 (290)
T ss_pred HHHHHHCCEecCCCCHHHEEECCC-----CCEEEeeCCCccccCCC--------CCCCCCCccccChhhhcCCC------
Confidence 999999999999999999999987 78999999999775443 11356899999999986654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATV 505 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~ 505 (588)
.+.++||||||+++|+|++|..||.......... ......++..+++.+++++.+||..||.+|+ +++++++
T Consensus 175 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~- 253 (290)
T cd05580 175 YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN- 253 (290)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc-
Confidence 3467999999999999999999997643211111 1223456677899999999999999999999 8889888
Q ss_pred HhhhhhcCCccccC
Q psy4039 506 CQLYLWAPKHWLYG 519 (588)
Q Consensus 506 L~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 254 --------~~~~~~ 259 (290)
T cd05580 254 --------HPWFAG 259 (290)
T ss_pred --------Cccccc
Confidence 999864
No 217
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-37 Score=318.99 Aligned_cols=250 Identities=23% Similarity=0.272 Sum_probs=193.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||.||+|.+. +..||||.+...... .....+.+|+.+++.+ +|+|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~n 64 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE----------------GVPFTAIREASLLKGL----KHAN 64 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC----------------CCcHHHHHHHHHHHhc----CCCC
Confidence 78999999999999999999886 789999998532111 0122345688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+.. ..++||||++++|.+++......+++..+..++.|++.||
T Consensus 65 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L 116 (291)
T cd07870 65 IVLLHDIIHTKE----------------------------TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGL 116 (291)
T ss_pred EeEEEEEEecCC----------------------------eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 999999987521 4899999998899888876544788999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+|+||||||+|||++.+ +.++|+|||+++........ .....+++.|+|||++.+... .
T Consensus 117 ~~lH~~~i~H~dlkp~Nil~~~~-----~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~-----~ 181 (291)
T cd07870 117 AYIHGQHILHRDLKPQNLLISYL-----GELKLADFGLARAKSIPSQT-----YSSEVVTLWYRPPDVLLGATD-----Y 181 (291)
T ss_pred HHHHhCCcccCCCChHHEEEcCC-----CcEEEeccccccccCCCCCC-----CCCccccccccCCceeecCCC-----C
Confidence 99999999999999999999877 78999999999764332111 113457899999999865331 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc-------------------------cccccccC--------CCC--CCcc
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT-------------------------DYEVNALP--------QLN--TNVP 478 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-------------------------~~~~~~~~--------~~~--~~~~ 478 (588)
+.++|||||||++|||++|..||....... .+.....+ ..+ ...+
T Consensus 182 ~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (291)
T cd07870 182 SSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRP 261 (291)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCC
Confidence 467999999999999999999996522100 00000000 000 1235
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 479 EVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 479 ~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.++.+++.+||+.||.+|||+++++. |||+
T Consensus 262 ~~~~~ll~~~l~~dp~~R~t~~~~l~---------h~~~ 291 (291)
T cd07870 262 PKAEDLASQMLMMFPKDRISAQDALL---------HPYF 291 (291)
T ss_pred hHHHHHHHHHhCcCcccCcCHHHHhc---------CCCC
Confidence 78899999999999999999999999 9996
No 218
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.3e-38 Score=323.79 Aligned_cols=260 Identities=22% Similarity=0.259 Sum_probs=201.4
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM 260 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~ 260 (588)
.+.+..++|.+++.||+|+||.||+|.+. +..||+|.+..... ......+.+|+.
T Consensus 9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~----------------~~~~~~~~~E~~ 72 (304)
T cd05101 9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT----------------EKDLSDLVSEME 72 (304)
T ss_pred cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc----------------hHHHHHHHHHHH
Confidence 46777899999999999999999999753 35799998742110 001234566888
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----- 334 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----- 334 (588)
+++.+ .+||||+++++++.+.. ..+++|||+ +|+|.+++..+.
T Consensus 73 ~l~~l---~~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~ 121 (304)
T cd05101 73 MMKMI---GKHKNIINLLGACTQDG----------------------------PLYVIVEYASKGNLREYLRARRPPGME 121 (304)
T ss_pred HHHhh---ccCCCchheeEEEecCC----------------------------ceEEEEecCCCCcHHHHHHhcCCcccc
Confidence 88776 47999999999987632 389999999 589999998642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..+++.++..++.|+++||.|||++||+||||||+|||++.+ +.+||+|||+++..........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~-----~~~kl~D~g~~~~~~~~~~~~~- 195 (304)
T cd05101 122 YSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN-----NVMKIADFGLARDVNNIDYYKK- 195 (304)
T ss_pred cccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC-----CcEEECCCccceeccccccccc-
Confidence 257888999999999999999999999999999999999877 7899999999987644221111
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHH
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEV 480 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~ 480 (588)
.....+++.|+|||++.+.. ++.++|||||||++|||++ |..||.+...... .........+..++.+
T Consensus 196 --~~~~~~~~~y~aPE~~~~~~------~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (304)
T cd05101 196 --TTNGRLPVKWMAPEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNE 267 (304)
T ss_pred --ccCCCCCceeeCchhhccCC------CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHH
Confidence 11234678899999986654 4578999999999999998 7888865322211 1112223345678999
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
+++++.+||+.+|++|||+.++++.|+..+
T Consensus 268 ~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 268 LYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 999999999999999999999999776543
No 219
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.7e-38 Score=315.80 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=200.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||+|++..... ....+.+|+.+++.+ ..|||
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------------------~~~~~~~e~~~l~~~---~~h~~ 64 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED------------------EEEEIKEEYNILRKY---SNHPN 64 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch------------------hHHHHHHHHHHHHHh---cCCCC
Confidence 88999999999999999999996 67899999853210 123456788888876 47999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql 349 (588)
|+++++++.+..+ ......++++|||+ +++|.+++... ...+++..+..++.|+
T Consensus 65 i~~~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql 122 (275)
T cd06608 65 IATFYGAFIKKNP----------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET 122 (275)
T ss_pred hheEEEEEEecCC----------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 9999999987431 01233589999999 57999988753 3579999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+++|+|+||+|+||+++.+ +.++|+|||++........ ......|++.|+|||++......
T Consensus 123 ~~al~~lH~~~i~H~~l~p~ni~~~~~-----~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~- 191 (275)
T cd06608 123 LRGLAYLHENKVIHRDIKGQNILLTKN-----AEVKLVDFGVSAQLDSTLG-----RRNTFIGTPYWMAPEVIACDEQP- 191 (275)
T ss_pred HHHHHHHhcCCcccCCCCHHHEEEccC-----CeEEECCCccceecccchh-----hhcCccccccccCHhHhcccccc-
Confidence 999999999999999999999999987 7899999999876543211 11235689999999998654321
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
...++.++|||||||++|+|++|..||......... .....+. .+..+++++++++.+||..||++|||++++++
T Consensus 192 ~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 192 DASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 112456899999999999999999999753211111 1111111 12346789999999999999999999999999
Q ss_pred HHhhhhhcCCccc
Q psy4039 505 VCQLYLWAPKHWL 517 (588)
Q Consensus 505 ~L~~~~~~~h~w~ 517 (588)
|||+
T Consensus 272 ---------~~~~ 275 (275)
T cd06608 272 ---------HPFI 275 (275)
T ss_pred ---------CCCC
Confidence 9996
No 220
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4e-38 Score=330.05 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=200.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||.|+||.||+|... +..||+|++...... ......+.+|+.+++.+ +|||
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~h~~ 65 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---------------PTLAKRTLRELKILRHF----KHDN 65 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---------------ccchHHHHHHHHHHHhc----CCCC
Confidence 78999999999999999999986 889999998532110 01223445688999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.... .....+++||||++++|.+++.... .+++..+..++.||+.||
T Consensus 66 iv~~~~~~~~~~------------------------~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL 120 (334)
T cd07855 66 IIAIRDILRPPG------------------------ADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGL 120 (334)
T ss_pred ccCHHHhccccC------------------------CCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHH
Confidence 999999876521 1123589999999889999987654 699999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++|+||||||+||+++.+ +.+||+|||+++........ .........|+..|+|||++.+... +
T Consensus 121 ~~LH~~~ivH~dlkp~Nil~~~~-----~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~-----~ 189 (334)
T cd07855 121 KYIHSANVIHRDLKPSNLLVNED-----CELRIGDFGMARGLSSSPTE-HKYFMTEYVATRWYRAPELLLSLPE-----Y 189 (334)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC-----CcEEecccccceeecccCcC-CCcccccccccccccChHHhcCCcc-----c
Confidence 99999999999999999999987 89999999999765432211 1111124578999999999865321 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc-----------------------c-----ccccc-----CCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----------------------Y-----EVNAL-----PQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-----------------------~-----~~~~~-----~~~~~~~~~~ 480 (588)
+.++|||||||++|||++|+.||.+...... . ..... ......++++
T Consensus 190 ~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (334)
T cd07855 190 TTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPE 269 (334)
T ss_pred ccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHH
Confidence 5789999999999999999999965311000 0 00000 0112456889
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++++|++||+.||++||++++++. |||+.
T Consensus 270 ~~~li~~~l~~~P~~Rpt~~~~l~---------~~~~~ 298 (334)
T cd07855 270 ALDLLSQMLQFDPEERITVEQALQ---------HPFLA 298 (334)
T ss_pred HHHHHHHHccCChhhCcCHHHHHh---------Chhhh
Confidence 999999999999999999999999 99997
No 221
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.3e-38 Score=323.63 Aligned_cols=259 Identities=22% Similarity=0.279 Sum_probs=201.8
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDML 261 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~i 261 (588)
..+.+..++|.+.+.||+|+||.||+|.+. +..||||++...... ...+.+.+|+.+
T Consensus 28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~----------------~~~~~~~~E~~~ 91 (302)
T cd05055 28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS----------------SEREALMSELKI 91 (302)
T ss_pred ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh----------------HHHHHHHHHHHH
Confidence 456677789999999999999999999862 458999998532110 012345678888
Q ss_pred HhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCH
Q psy4039 262 MNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSM 339 (588)
Q Consensus 262 l~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~ 339 (588)
++++ .+||||+++++++.... ..+++|||+ +|+|.+++.... ..+++
T Consensus 92 l~~l---~~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~l~~ 140 (302)
T cd05055 92 MSHL---GNHENIVNLLGACTIGG----------------------------PILVITEYCCYGDLLNFLRRKRESFLTL 140 (302)
T ss_pred HHhc---cCCCCcceEEEEEecCC----------------------------ceEEEEEcCCCCcHHHHHHhCCCCCCCH
Confidence 8876 47999999999987632 389999999 589999998643 24899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccch
Q psy4039 340 HERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAP 419 (588)
Q Consensus 340 ~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~AP 419 (588)
.++..++.|++.||.|||+++|+|+||||+|||++.+ ..++|+|||+++......... ......+++.|+||
T Consensus 141 ~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~-----~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aP 212 (302)
T cd05055 141 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHG-----KIVKICDFGLARDIMNDSNYV---VKGNARLPVKWMAP 212 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCC-----CeEEECCCcccccccCCCcee---ecCCCCcccccCCH
Confidence 9999999999999999999999999999999999877 789999999998654422111 11123467889999
Q ss_pred hHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCC
Q psy4039 420 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPS 494 (588)
Q Consensus 420 E~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~ 494 (588)
|++.+.. .+.++||||+||++|||++ |..||......... .....+..+...++++.+++.+||+.+|+
T Consensus 213 E~~~~~~------~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 286 (302)
T cd05055 213 ESIFNCV------YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPL 286 (302)
T ss_pred hhhccCC------CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCch
Confidence 9987654 4578999999999999998 99998764322111 11112234456789999999999999999
Q ss_pred CCCCHHHHHHHHhh
Q psy4039 495 DRPSAELAATVCQL 508 (588)
Q Consensus 495 ~Rps~~e~l~~L~~ 508 (588)
+|||+.++++.|+.
T Consensus 287 ~Rpt~~ell~~l~~ 300 (302)
T cd05055 287 KRPTFKQIVQLIGK 300 (302)
T ss_pred hCcCHHHHHHHHHh
Confidence 99999999987764
No 222
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.4e-38 Score=321.32 Aligned_cols=256 Identities=25% Similarity=0.268 Sum_probs=202.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||.|+||.||+|.+. +..||+|.+.... . ...+.+.+|+.+++.+ +|||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----~-------------~~~~~~~~e~~~l~~l----~h~~ 63 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES----E-------------EELEDFMVEIDILSEC----KHPN 63 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC----H-------------HHHHHHHHHHHHHHhC----CCCc
Confidence 67999999999999999999986 7899999984311 0 0123456788899887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+ +++|.+++......+++..+..++.|++.|
T Consensus 64 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~ 115 (280)
T cd06611 64 IVGLYEAYFYEN----------------------------KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA 115 (280)
T ss_pred eeEEEEEEecCC----------------------------eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 999999987632 489999999 579999998765579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.++|+|||++........ ......||+.|+|||++....... ..
T Consensus 116 l~~lh~~~i~h~dl~p~nili~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~-~~ 184 (280)
T cd06611 116 LNFLHSHKVIHRDLKAGNILLTLD-----GDVKLADFGVSAKNKSTLQ-----KRDTFIGTPYWMAPEVVACETFKD-NP 184 (280)
T ss_pred HHHHHHCCcccCCCChhhEEECCC-----CCEEEccCccchhhccccc-----ccceeecchhhcCHHHHhhcccCC-CC
Confidence 999999999999999999999987 7999999999866433211 111356899999999986432111 11
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccC--CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALP--QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~--~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|||++|+.||......... .....+ ..+..++.++.+++.+||+.||++||+++++++
T Consensus 185 ~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~--- 261 (280)
T cd06611 185 YDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK--- 261 (280)
T ss_pred CCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc---
Confidence 346899999999999999999999764221111 111111 224567899999999999999999999999999
Q ss_pred hhhhcCCccccCC
Q psy4039 508 LYLWAPKHWLYGA 520 (588)
Q Consensus 508 ~~~~~~h~w~~~~ 520 (588)
|||+...
T Consensus 262 ------~~~~~~~ 268 (280)
T cd06611 262 ------HPFVSDQ 268 (280)
T ss_pred ------Chhhccc
Confidence 9999755
No 223
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=355.38 Aligned_cols=267 Identities=22% Similarity=0.293 Sum_probs=201.9
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+++|++.+.||+|+||.||+|.+. ++.||||++...... +. ...+.+.+|+.+++.+ +||
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~-~e-------------~~~~rflrEi~ILs~L----~HP 62 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE-NP-------------LLKKRFLREAKIAADL----IHP 62 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccccc-CH-------------HHHHHHHHHHHHHHhC----CCc
Confidence 378999999999999999999986 789999998532111 10 1234567799999887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh----------cCCCCHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER----------CAQLSMHE 341 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~----------~~~l~~~~ 341 (588)
||+++++++.+.. ..+++|||+ +|+|.+++... ...+++..
T Consensus 63 NIVkl~~v~~d~~----------------------------~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~ 114 (932)
T PRK13184 63 GIVPVYSICSDGD----------------------------PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGA 114 (932)
T ss_pred CcCeEEEEEeeCC----------------------------EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHH
Confidence 9999999987632 489999999 67999998742 12456778
Q ss_pred HHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCc----c---------ccccccc
Q psy4039 342 RVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS----M---------QYSSADI 408 (588)
Q Consensus 342 ~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~----~---------~~~~~~~ 408 (588)
+..++.||++||+|||++||+||||||+|||++.+ +.+||+|||+++....... . .......
T Consensus 115 iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d-----g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g 189 (932)
T PRK13184 115 FLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLF-----GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG 189 (932)
T ss_pred HHHHHHHHHHHHHHHHHCCccccCCchheEEEcCC-----CCEEEEecCcceecccccccccccccccccccccccccCC
Confidence 89999999999999999999999999999999987 7899999999987521100 0 0001112
Q ss_pred cccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc--ccC---CCCCCccHHHHH
Q psy4039 409 ELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--ALP---QLNTNVPEVMRR 483 (588)
Q Consensus 409 ~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~---~~~~~~~~~l~~ 483 (588)
..+||+.|||||++.+.. ++.++|||||||++|||++|..||............ ..+ .....+|+.+.+
T Consensus 190 ~~vGT~~YmAPE~l~g~~------~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~ 263 (932)
T PRK13184 190 KIVGTPDYMAPERLLGVP------ASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQ 263 (932)
T ss_pred CCCCCCCCCCHHHhcCCC------CCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHH
Confidence 357999999999997665 457899999999999999999999763221111000 000 112467899999
Q ss_pred HHHHhhhhCCCCCCC-HHHHHHHHhhhhhcCCcccc
Q psy4039 484 LVAKLLENDPSDRPS-AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 484 Li~~~L~~dP~~Rps-~~e~l~~L~~~~~~~h~w~~ 518 (588)
++.+||+.||++||+ ++++++.|+.++-....|..
T Consensus 264 LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~ 299 (932)
T PRK13184 264 IAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTV 299 (932)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHHhcCccccc
Confidence 999999999999965 66666777776665566654
No 224
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.1e-37 Score=315.36 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=197.6
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--C---eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--G---VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g---~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
+..++|+..+.||+|+||.||+|++. + ..+|||.+..... . ...+.+..|+.++..+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~---~-------------~~~~~~~~e~~~l~~l-- 63 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT---E-------------KQRQDFLSEASIMGQF-- 63 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC---H-------------HHHHHHHHHHHHHhcC--
Confidence 34578999999999999999999985 2 3799999843211 0 0123456688888887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+||||+++++++.+.. ..++||||+ +++|.+++......+++.++..++
T Consensus 64 --~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 113 (268)
T cd05063 64 --SHHNIIRLEGVVTKFK----------------------------PAMIITEYMENGALDKYLRDHDGEFSSYQLVGML 113 (268)
T ss_pred --CCCCeeEEEEEEccCC----------------------------CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 8999999999987632 389999999 579999998765589999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||.|||+.||+||||||+||+++.+ +.+||+|||++............ ......++.|+|||++.+..
T Consensus 114 ~~l~~al~~lH~~~i~H~dlkp~Nili~~~-----~~~kl~dfg~~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~ 186 (268)
T cd05063 114 RGIAAGMKYLSDMNYVHRDLAARNILVNSN-----LECKVSDFGLSRVLEDDPEGTYT--TSGGKIPIRWTAPEAIAYRK 186 (268)
T ss_pred HHHHHHHHHHHHCCeeccccchhhEEEcCC-----CcEEECCCccceeccccccccee--ccCCCcCceecCHHHhhcCC
Confidence 999999999999999999999999999977 78999999999765442211111 11122356799999987554
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
++.++|||||||++|||++ |..||......... ......+.+..++.++.+++.+||+.+|++||++.++
T Consensus 187 ------~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i 260 (268)
T cd05063 187 ------FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDI 260 (268)
T ss_pred ------cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 4578999999999999997 99999653221111 1112223445688999999999999999999999999
Q ss_pred HHHHhh
Q psy4039 503 ATVCQL 508 (588)
Q Consensus 503 l~~L~~ 508 (588)
++.|..
T Consensus 261 ~~~l~~ 266 (268)
T cd05063 261 VNLLDK 266 (268)
T ss_pred HHHHHh
Confidence 987763
No 225
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-37 Score=313.21 Aligned_cols=247 Identities=23% Similarity=0.329 Sum_probs=199.3
Q ss_pred ccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
.+..++|++.+.||+|+||.||+|...++.||||.+..... ..+.+.+|+.+++.+ +|
T Consensus 2 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~------------------~~~~~~~e~~~l~~l----~~ 59 (256)
T cd05039 2 AINSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST------------------AAQAFLAEASVMTTL----RH 59 (256)
T ss_pred ccChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh------------------HHHHHHHHHHHHHhc----CC
Confidence 45568899999999999999999999999999999853210 123456688899887 89
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQL 349 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql 349 (588)
+||+++++++.+.. ..++||||+ +++|.+++.... ..+++..+..++.|+
T Consensus 60 ~~i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi 111 (256)
T cd05039 60 PNLVQLLGVVLQGN----------------------------PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDV 111 (256)
T ss_pred cceeeeEEEEcCCC----------------------------CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 99999999987532 389999999 479999998653 368999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+++|+||||||+||+++.+ +.++|+|||.++....... ...++..|+|||++....
T Consensus 112 ~~~l~~lh~~~i~H~di~p~Nili~~~-----~~~~l~d~g~~~~~~~~~~--------~~~~~~~~~ape~~~~~~--- 175 (256)
T cd05039 112 CEGMEYLEEKNFVHRDLAARNVLVSED-----LVAKVSDFGLAKEASQGQD--------SGKLPVKWTAPEALREKK--- 175 (256)
T ss_pred HHHHHHHHhCCccchhcccceEEEeCC-----CCEEEcccccccccccccc--------cCCCcccccCchhhcCCc---
Confidence 999999999999999999999999987 7899999999977533211 123456899999986543
Q ss_pred cCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
.+.++||||||+++|||++ |..||......... .....+..+..+|+++.+++.+||..+|++|||++++++.
T Consensus 176 ---~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 176 ---FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred ---CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 4468999999999999997 99998664221111 1112234456788999999999999999999999999987
Q ss_pred Hh
Q psy4039 506 CQ 507 (588)
Q Consensus 506 L~ 507 (588)
|+
T Consensus 253 l~ 254 (256)
T cd05039 253 LA 254 (256)
T ss_pred Hh
Confidence 65
No 226
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.6e-37 Score=313.54 Aligned_cols=258 Identities=21% Similarity=0.286 Sum_probs=200.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|+.++.||+|+||.||+|... +..||+|.+........... ...+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~-----------~~~~~~~~e~~~l~~l----~h~~i 65 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQE-----------EVVEALRKEIRLMARL----NHPHI 65 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHH-----------HHHHHHHHHHHHHHHc----CCCce
Confidence 4778899999999999999875 78999999853221111100 0123456788999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+. ...++||||+ +++|.+++.... .+++..+..++.|++.||
T Consensus 66 v~~~~~~~~~----------------------------~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 66 IRMLGATCED----------------------------SHFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGL 116 (268)
T ss_pred ehhhceeccC----------------------------CeEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHH
Confidence 9999998752 1489999999 579999998754 789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++|++||||||+||+++.+. ..+||+|||.+.......... ........||..|+|||++.+.. .
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~~----~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~------~ 185 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDSTG----QRLRIADFGAAARLAAKGTGA-GEFQGQLLGTIAFMAPEVLRGEQ------Y 185 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCCC----CEEEEcccccccccccccccC-CccccccccccceeCHhHhccCC------C
Confidence 999999999999999999997652 369999999997765421110 11112356899999999986654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc-------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
+.++||||+||++|+|++|..||......... .....+..+..+++++.+++.+||..||++||++.++++
T Consensus 186 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~-- 263 (268)
T cd06630 186 GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK-- 263 (268)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc--
Confidence 57899999999999999999999653221111 112234556678899999999999999999999999999
Q ss_pred hhhhhcCCcccc
Q psy4039 507 QLYLWAPKHWLY 518 (588)
Q Consensus 507 ~~~~~~~h~w~~ 518 (588)
|||++
T Consensus 264 -------~~~~~ 268 (268)
T cd06630 264 -------HPVFR 268 (268)
T ss_pred -------CcccC
Confidence 99974
No 227
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-37 Score=329.24 Aligned_cols=253 Identities=24% Similarity=0.275 Sum_probs=195.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||.+...... . .....+.+|+.+++.+ +|||
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~-------------~~~~~~~~E~~~l~~l----~h~~ 76 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN--V-------------THAKRAYRELVLMKLV----NHKN 76 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC--h-------------hHHHHHHHHHHHHHhc----CCCC
Confidence 88999999999999999999986 789999998421110 0 0112344688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++++++|..... .......|+||||+.++|.+.+.. .+++..+..++.|++.||
T Consensus 77 iv~~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL 131 (353)
T cd07850 77 IIGLLNVFTPQKS----------------------LEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGI 131 (353)
T ss_pred CcceeeeeccCCC----------------------ccccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHH
Confidence 9999999875321 111224899999999999998864 489999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+||+++.+ +.+||+|||+++....... .....||+.|+|||++.+.. +
T Consensus 132 ~~LH~~gi~H~dlkp~Nil~~~~-----~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~------~ 194 (353)
T cd07850 132 KHLHSAGIIHRDLKPSNIVVKSD-----CTLKILDFGLARTAGTSFM------MTPYVVTRYYRAPEVILGMG------Y 194 (353)
T ss_pred HHHHhCCeeeCCCCHHHEEECCC-----CCEEEccCccceeCCCCCC------CCCCcccccccCHHHHhCCC------C
Confidence 99999999999999999999987 7899999999987544221 11345889999999997654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc-------------------------c----------------ccccC-
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------------------------E----------------VNALP- 471 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-------------------------~----------------~~~~~- 471 (588)
+.++|||||||++|+|++|+.||........+ . ....+
T Consensus 195 ~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (353)
T cd07850 195 KENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPP 274 (353)
T ss_pred CCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCc
Confidence 57899999999999999999999642110000 0 00000
Q ss_pred ---CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 472 ---QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 472 ---~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
..+...++.++++|.+||+.||++|||+.++++ |||++
T Consensus 275 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~---------~~~~~ 315 (353)
T cd07850 275 DSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ---------HPYIN 315 (353)
T ss_pred ccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc---------ChhHh
Confidence 001234667899999999999999999999999 99886
No 228
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.3e-38 Score=321.60 Aligned_cols=254 Identities=21% Similarity=0.264 Sum_probs=196.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC--C--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--G--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
++|++.+.||+|+||.||+|.+. + ..+|+|.+..... . ...+.+.+|+.++.++ .+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~---~-------------~~~~~~~~E~~~l~~l---~~h 62 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS---E-------------NDHRDFAGELEVLCKL---GHH 62 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC---H-------------HHHHHHHHHHHHHHhh---cCC
Confidence 78999999999999999999886 2 3578888742110 0 0123456788888776 479
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc---------------C
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---------------A 335 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---------------~ 335 (588)
|||+++++++.+.. ..+++|||+ +++|.+++.... .
T Consensus 63 p~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 114 (297)
T cd05089 63 PNIINLLGACENRG----------------------------YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAS 114 (297)
T ss_pred CchhheEEEEccCC----------------------------cceEEEEecCCCcHHHHHHhccccccccccccccCccC
Confidence 99999999886531 389999999 689999997532 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCcc
Q psy4039 336 QLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVA 415 (588)
Q Consensus 336 ~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~ 415 (588)
.+++..++.++.|++.||+|||++||+||||||+|||++.+ +.+||+|||++......... .....+..
T Consensus 115 ~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~dfg~~~~~~~~~~~------~~~~~~~~ 183 (297)
T cd05089 115 TLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN-----LASKIADFGLSRGEEVYVKK------TMGRLPVR 183 (297)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC-----CeEEECCcCCCccccceecc------CCCCcCcc
Confidence 48899999999999999999999999999999999999887 78999999998643221110 01223557
Q ss_pred ccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhh
Q psy4039 416 LMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLEN 491 (588)
Q Consensus 416 Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~ 491 (588)
|+|||++.+.. ++.++|||||||++|||++ |..||......... .....+..+..++.++.+++.+||..
T Consensus 184 y~aPE~~~~~~------~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 257 (297)
T cd05089 184 WMAIESLNYSV------YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRD 257 (297)
T ss_pred ccCchhhccCC------CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence 99999987654 4578999999999999997 99999764322111 11223345567899999999999999
Q ss_pred CCCCCCCHHHHHHHHhhhhhcC
Q psy4039 492 DPSDRPSAELAATVCQLYLWAP 513 (588)
Q Consensus 492 dP~~Rps~~e~l~~L~~~~~~~ 513 (588)
||.+||+++++++.|..++.+.
T Consensus 258 ~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 258 RPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred ChhhCcCHHHHHHHHHHHHHhh
Confidence 9999999999999888776544
No 229
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.8e-38 Score=320.00 Aligned_cols=250 Identities=22% Similarity=0.303 Sum_probs=195.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|+..+.||.|+||.||+|++. +..||||.+...... ......+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~h~~i 61 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---------------EGVPSTAIREISLLKEL----NHPNI 61 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc---------------cccchHHHHHHHHHHhc----CCCCC
Confidence 4889999999999999999986 789999998432111 01223466799999987 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER-CAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..+++|||++++|.+++... ...+++..+..++.|++.||
T Consensus 62 ~~~~~~~~~~~----------------------------~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l 113 (284)
T cd07860 62 VKLLDVIHTEN----------------------------KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGL 113 (284)
T ss_pred cchhhhcccCC----------------------------cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999886532 48999999988999998764 34789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
+|||+++++||||||+||+++.+ +.+||+|||++......... .....+++.|+|||++.+... .
T Consensus 114 ~~lh~~~i~H~~l~p~nill~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~-----~ 178 (284)
T cd07860 114 AFCHSHRVLHRDLKPQNLLINTE-----GAIKLADFGLARAFGVPVRT-----YTHEVVTLWYRAPEILLGCKY-----Y 178 (284)
T ss_pred HHHHHCCeecCCCCHHHEEECCC-----CCEEEeeccchhhcccCccc-----cccccccccccCCeEEecCCC-----C
Confidence 99999999999999999999988 78999999998765432111 113457889999998865431 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc-------------------------------ccccCCCCCCccHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-------------------------------VNALPQLNTNVPEVMR 482 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~l~ 482 (588)
+.++|||||||++|||++|+.||.......... ..........++++++
T Consensus 179 ~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (284)
T cd07860 179 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGR 258 (284)
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHH
Confidence 467999999999999999999996532110000 0000011235678899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++|.+||+.||++|||+++++. |||+
T Consensus 259 ~li~~~l~~~P~~Rpt~~~~l~---------~~~f 284 (284)
T cd07860 259 DLLSQMLHYDPNKRISAKAALA---------HPFF 284 (284)
T ss_pred HHHHHhcCCCcccCCCHHHHhc---------CCCC
Confidence 9999999999999999999999 9996
No 230
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2e-37 Score=312.12 Aligned_cols=254 Identities=26% Similarity=0.342 Sum_probs=199.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||.|+||+||+|.+. +..+|+|++....... ....+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------~~~~~~~e~~~l~~l----~~~~ 60 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT----------------SVDELRKEVQAMSQC----NHPN 60 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch----------------HHHHHHHHHHHHHhc----CCCC
Confidence 57999999999999999999985 7899999984311110 223456788888876 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--CCCCHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC--AQLSMHERVLLFTQLL 350 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~--~~l~~~~~~~i~~ql~ 350 (588)
|+++++.+.+.. ..+++||++ +++|.+++.... ..+++..+..++.|++
T Consensus 61 i~~~~~~~~~~~----------------------------~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~ 112 (267)
T cd06610 61 VVKYYTSFVVGD----------------------------ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL 112 (267)
T ss_pred EEEEEEEEeeCC----------------------------EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHH
Confidence 999999887632 489999999 579999998642 3689999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++||+||||||+||+++++ +.++|+|||++.......... ........|+..|+|||++.....
T Consensus 113 ~al~~lh~~~i~h~~l~p~ni~~~~~-----~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~--- 183 (267)
T cd06610 113 KGLEYLHSNGQIHRDIKAGNILLGED-----GSVKIADFGVSASLADGGDRT-RKVRKTFVGTPCWMAPEVMEQVHG--- 183 (267)
T ss_pred HHHHHHHhCCeecCCCCHHhEEEcCC-----CCEEEcccchHHHhccCcccc-ccccccccCChhhcChHHHccccC---
Confidence 99999999999999999999999987 789999999998765432211 011124568999999999876521
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc---cccCCC-----CCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV---NALPQL-----NTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~---~~~~~~-----~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|+|||||++|||++|+.||........+.. ...+.+ ...+++++.+++.+||+.||++||+++++
T Consensus 184 --~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l 261 (267)
T cd06610 184 --YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261 (267)
T ss_pred --cCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 45789999999999999999999976422211111 111111 13678899999999999999999999999
Q ss_pred HHHHhhhhhcCCccc
Q psy4039 503 ATVCQLYLWAPKHWL 517 (588)
Q Consensus 503 l~~L~~~~~~~h~w~ 517 (588)
+. |||+
T Consensus 262 l~---------~p~~ 267 (267)
T cd06610 262 LK---------HKFF 267 (267)
T ss_pred hh---------CCCC
Confidence 99 9996
No 231
>KOG1095|consensus
Probab=100.00 E-value=3.5e-38 Score=357.11 Aligned_cols=257 Identities=26% Similarity=0.331 Sum_probs=206.6
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC---C----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhh
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR---G----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNS 264 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~---g----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~ 264 (588)
.+..+..++...||+|.||.||.|... + ..||||.+..... .....+|.+|..+|++
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~----------------~~~~~~Fl~Ea~~m~~ 751 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS----------------EQEVSDFLKEALLMSK 751 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC----------------HHHHHHHHHHHHHHhc
Confidence 466678899999999999999999997 3 2489998853211 1144567889999999
Q ss_pred hcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh------cCCC
Q psy4039 265 VENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER------CAQL 337 (588)
Q Consensus 265 l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~------~~~l 337 (588)
+ +|||||+++|+|.+.. ..++++||| +|+|..||++. ...+
T Consensus 752 f----~HpNiv~liGv~l~~~----------------------------~~~i~leyM~gGDL~sflr~~r~~~~~~~~L 799 (1025)
T KOG1095|consen 752 F----DHPNIVSLIGVCLDSG----------------------------PPLILLEYMEGGDLLSFLRESRPAPFQPSNL 799 (1025)
T ss_pred C----CCcceeeEEEeecCCC----------------------------CcEEEehhcccCcHHHHHHhcccccCCCCCC
Confidence 8 9999999999998732 289999999 78999999987 5679
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCcccc
Q psy4039 338 SMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM 417 (588)
Q Consensus 338 ~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~ 417 (588)
+..+.+.++.|||+|+.||+++++|||||.++|+||+.. ..+||+|||+|+.+-..... .....-.-...||
T Consensus 800 ~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~-----r~VKIaDFGlArDiy~~~yy---r~~~~a~lPvkWm 871 (1025)
T KOG1095|consen 800 SMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER-----RVVKIADFGLARDIYDKDYY---RKHGEAMLPVKWM 871 (1025)
T ss_pred CHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc-----CcEEEcccchhHhhhhchhe---eccCccccceecC
Confidence 999999999999999999999999999999999999988 79999999999943322111 1111112245899
Q ss_pred chhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCC
Q psy4039 418 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDP 493 (588)
Q Consensus 418 APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP 493 (588)
|||.+.... +++|+|||||||++||++| |..||.+...... +....+-+.|..||+.+.++|..||+.+|
T Consensus 872 ~PEsl~d~i------FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~p 945 (1025)
T KOG1095|consen 872 PPESLKDGI------FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDP 945 (1025)
T ss_pred CHHHHhhcc------cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCCh
Confidence 999997643 5699999999999999998 7889877432222 22333556788999999999999999999
Q ss_pred CCCCCHHHHHHHHhhhh
Q psy4039 494 SDRPSAELAATVCQLYL 510 (588)
Q Consensus 494 ~~Rps~~e~l~~L~~~~ 510 (588)
++||++..+++-+....
T Consensus 946 e~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 946 EDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred hhCccHHHHHhhhhhhh
Confidence 99999999998655443
No 232
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-38 Score=321.46 Aligned_cols=250 Identities=23% Similarity=0.297 Sum_probs=199.2
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+..++|++.+.||+|+||+||++.+. ++.||+|++..... ......+.+|+.+++.+ +
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~----------------~~~~~~~~~E~~~l~~l----~ 61 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK----------------SSVRKQILRELQIMHEC----R 61 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc----------------chHHHHHHHHHHHHHHc----C
Confidence 34578999999999999999999987 88999999843210 01223456788899887 8
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
||||+++++++.+.. .+++||||+ +++|.+++...+ .+++..+..++.++
T Consensus 62 h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i 112 (284)
T cd06620 62 SPYIVSFYGAFLNEN----------------------------NICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAV 112 (284)
T ss_pred CCCcceEeeeEecCC----------------------------EEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHH
Confidence 999999999987632 489999999 579999987754 78999999999999
Q ss_pred HHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
+.||.|||+ .+|+||||||+||+++.+ +.++|+|||++........ ....||..|+|||++.+..
T Consensus 113 ~~~l~~LH~~~~i~H~dl~p~nil~~~~-----~~~~l~d~gl~~~~~~~~~-------~~~~~~~~~~aPE~~~~~~-- 178 (284)
T cd06620 113 VEGLTYLYNVHRIMHRDIKPSNILVNSR-----GQIKLCDFGVSGELINSIA-------DTFVGTSTYMSPERIQGGK-- 178 (284)
T ss_pred HHHHHHHHHhcCeeccCCCHHHEEECCC-----CcEEEccCCcccchhhhcc-------CccccCcccCCHHHHccCC--
Confidence 999999997 699999999999999887 7899999999865432111 1356899999999986553
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccc-----------c---cccccccCCCCC-CccHHHHHHHHHhhhhCC
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN-----------T---DYEVNALPQLNT-NVPEVMRRLVAKLLENDP 493 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~-----------~---~~~~~~~~~~~~-~~~~~l~~Li~~~L~~dP 493 (588)
.+.++|||||||++|+|++|..||...... . .......+.++. .++.++.+|+.+||+.||
T Consensus 179 ----~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp 254 (284)
T cd06620 179 ----YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDP 254 (284)
T ss_pred ----CCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCc
Confidence 457899999999999999999999753321 0 001111222322 378899999999999999
Q ss_pred CCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 494 SDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 494 ~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++|||++++++ |+|+.
T Consensus 255 ~~Rpt~~e~~~---------~~~~~ 270 (284)
T cd06620 255 TERPTPQQLCA---------MPPFI 270 (284)
T ss_pred ccCcCHHHHhc---------Ccccc
Confidence 99999999999 88876
No 233
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1e-37 Score=320.09 Aligned_cols=252 Identities=22% Similarity=0.237 Sum_probs=195.2
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC------------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchh
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR------------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLR 255 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~------------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~ 255 (588)
..++|++.+.||+|+||.||+|.+. +..||+|.+...... .....+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~----------------~~~~~~ 66 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD----------------NAREDF 66 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH----------------HHHHHH
Confidence 3478999999999999999999875 256899998532110 022345
Q ss_pred hhHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc
Q psy4039 256 LNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC 334 (588)
Q Consensus 256 ~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~ 334 (588)
.+|+.+++.+ +||||+++++++.+.. ..+++||++ +++|.+++....
T Consensus 67 ~~e~~~l~~l----~~~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~ 114 (296)
T cd05051 67 LKEVKILSRL----SDPNIARLLGVCTVDP----------------------------PLCMIMEYMENGDLNQFLQKHV 114 (296)
T ss_pred HHHHHHHHhc----CCCCEeEEEEEEecCC----------------------------CcEEEEecCCCCCHHHHHHhcc
Confidence 6789999987 8999999999987631 389999999 589999997653
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..+++..++.++.|++.||.|||+++|+||||||+||+++.+ +.++|+|||+++.........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~-----~~~~l~dfg~~~~~~~~~~~~-- 187 (296)
T cd05051 115 AETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN-----YTIKIADFGMSRNLYSSDYYR-- 187 (296)
T ss_pred cccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC-----CceEEccccceeecccCccee--
Confidence 258999999999999999999999999999999999999988 799999999997654322111
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc--CCCCCcccccccccc----------ccccCC
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG--HDNPFYQSARNTDYE----------VNALPQ 472 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt--G~~Pf~~~~~~~~~~----------~~~~~~ 472 (588)
......+|+.|+|||++.+.. .+.++|||||||++|||++ |..||........+. ......
T Consensus 188 -~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (296)
T cd05051 188 -VQGRAPLPIRWMAWESVLLGK------FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLP 260 (296)
T ss_pred -ecCcCCCCceecCHHHhhcCC------CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCC
Confidence 112345788999999987644 4578999999999999998 678886532111100 011112
Q ss_pred CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 473 LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 473 ~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+..+|+++.+++.+||+.||.+|||+.++++.|+
T Consensus 261 ~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 261 RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 34567899999999999999999999999988654
No 234
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.4e-37 Score=319.10 Aligned_cols=255 Identities=22% Similarity=0.242 Sum_probs=199.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|++.+.||.|+||.||+|.+. +..||+|++.... .. ..+.+.+|+.+++.+ +|||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-----~~------------~~~~~~~e~~~l~~l----~h~~ 70 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-----EE------------ELEDYMVEIEILATC----NHPY 70 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-----HH------------HHHHHHHHHHHHHhC----CCCc
Confidence 67999999999999999999986 7899999984321 00 123455688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.... ..++||||+ +++|..++......+++..+..++.|++.|
T Consensus 71 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~ 122 (292)
T cd06644 71 IVKLLGAFYWDG----------------------------KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEA 122 (292)
T ss_pred EeeeEEEEEeCC----------------------------eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 999999887531 489999999 578888887655579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.++|+|||++........ ......|++.|+|||++.+.... ...
T Consensus 123 l~~lH~~~i~H~dlkp~Nili~~~-----~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~-~~~ 191 (292)
T cd06644 123 LQYLHSMKIIHRDLKAGNVLLTLD-----GDIKLADFGVSAKNVKTLQ-----RRDSFIGTPYWMAPEVVMCETMK-DTP 191 (292)
T ss_pred HHHHhcCCeeecCCCcceEEEcCC-----CCEEEccCccceecccccc-----ccceecCCccccCceeecccccc-CCC
Confidence 999999999999999999999877 7899999999875433111 11135688999999998643211 111
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---ccccc--CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNAL--PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~--~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
++.++|||||||++|||++|..||......... ..... ...+..++.++.+++.+||+.||++||+++++++
T Consensus 192 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--- 268 (292)
T cd06644 192 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE--- 268 (292)
T ss_pred CCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc---
Confidence 356899999999999999999999663221111 11111 1234567889999999999999999999999998
Q ss_pred hhhhcCCccccC
Q psy4039 508 LYLWAPKHWLYG 519 (588)
Q Consensus 508 ~~~~~~h~w~~~ 519 (588)
|||+..
T Consensus 269 ------~~~~~~ 274 (292)
T cd06644 269 ------HPFVSS 274 (292)
T ss_pred ------Cccccc
Confidence 999973
No 235
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-37 Score=312.29 Aligned_cols=253 Identities=21% Similarity=0.256 Sum_probs=200.7
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|.+.+.||+|+||.||+|.+. ++.||||.+..... ....+.+|+.+++.+
T Consensus 1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~------------------~~~~~~~e~~~l~~l---- 58 (261)
T cd05034 1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM------------------SPEAFLQEAQIMKKL---- 58 (261)
T ss_pred CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc------------------CHHHHHHHHHHHhhC----
Confidence 4567789999999999999999999986 57899999853211 123466789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++.... ..+++..+..++.
T Consensus 59 ~h~~i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 110 (261)
T cd05034 59 RHDKLVQLYAVCSEEE----------------------------PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAA 110 (261)
T ss_pred CCCCEeeeeeeeecCC----------------------------ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHH
Confidence 8999999999876532 389999999 579999998753 4689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+|+||||+||+++++ +.++|+|||+++......... .....++..|+|||.+.+..
T Consensus 111 ~i~~al~~lh~~~i~h~di~p~nili~~~-----~~~~l~d~g~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~- 180 (261)
T cd05034 111 QIAEGMAYLESRNYIHRDLAARNILVGEN-----LVCKIADFGLARLIEDDEYTA----REGAKFPIKWTAPEAANYGR- 180 (261)
T ss_pred HHHHHHHHHHhCCcccCCcchheEEEcCC-----CCEEECccccceeccchhhhh----hhccCCCccccCHHHhccCC-
Confidence 99999999999999999999999999988 899999999998765321110 01223466899999987654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++||||+||++|||++ |+.||.+....... ........+..+|.++.+++.+||..||++||+++++.
T Consensus 181 -----~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 181 -----FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred -----cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 3468999999999999998 99999663221111 11112234566789999999999999999999999998
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 256 ~~l~~ 260 (261)
T cd05034 256 SFLED 260 (261)
T ss_pred HHHhc
Confidence 87763
No 236
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4e-37 Score=310.17 Aligned_cols=252 Identities=26% Similarity=0.365 Sum_probs=200.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||+|.++....... .....+.+|+.+++.+ +|+|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------~~~~~~~~ei~~l~~~----~~~~ 63 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDA--------------KARQDCLKEIDLLKQL----DHPN 63 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccch--------------hhHHHHHHHHHHHHhC----CCCC
Confidence 68999999999999999999997 88999999853221111 0234566789999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql 349 (588)
|+++++++.+.. ..+++|||+ +++|.+++... ...+++.++..++.|+
T Consensus 64 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 115 (267)
T cd08224 64 VIKYLASFIENN----------------------------ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQL 115 (267)
T ss_pred eeeeeeeeecCC----------------------------eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHH
Confidence 999999987632 389999999 57999998752 3468999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+.||+||||||+||+++.+ +.++|+|||+++........ .....|++.|+|||.+.+..
T Consensus 116 ~~~l~~lh~~~i~h~dl~p~nil~~~~-----~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~y~apE~~~~~~--- 182 (267)
T cd08224 116 CSALEHMHSKRIMHRDIKPANVFITAT-----GVVKLGDLGLGRFFSSKTTA-----AHSLVGTPYYMSPERIHENG--- 182 (267)
T ss_pred HHHHHHHHhCCEecCCcChhhEEECCC-----CcEEEeccceeeeccCCCcc-----cceecCCccccCHHHhccCC---
Confidence 999999999999999999999999987 78999999998765432111 12356889999999987654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccc-----cccccccCCCCC-CccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT-----DYEVNALPQLNT-NVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-----~~~~~~~~~~~~-~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|+|++|..||....... .......++.+. .++.++.+++.+||..+|++|||+.+++
T Consensus 183 ---~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il 259 (267)
T cd08224 183 ---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259 (267)
T ss_pred ---CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 4468999999999999999999996542211 111122333343 6788999999999999999999999999
Q ss_pred HHHhhh
Q psy4039 504 TVCQLY 509 (588)
Q Consensus 504 ~~L~~~ 509 (588)
+.++.+
T Consensus 260 ~~~~~~ 265 (267)
T cd08224 260 QVAKEM 265 (267)
T ss_pred HHHHHh
Confidence 877643
No 237
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1e-37 Score=315.77 Aligned_cols=254 Identities=21% Similarity=0.309 Sum_probs=198.1
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
...+|++.+.||+|+||.||+|.+. +..||+|.+..... . ...+.+.+|+.+++.+
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~---~-------------~~~~~~~~e~~~l~~l--- 62 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT---E-------------KQRRDFLSEASIMGQF--- 62 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC---H-------------HHHHHHHHHHHHHHhC---
Confidence 3478999999999999999999874 34799999843110 0 0123456788888887
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++......+++.++..++.
T Consensus 63 -~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~ 113 (267)
T cd05066 63 -DHPNIIHLEGVVTKSK----------------------------PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLR 113 (267)
T ss_pred -CCCCcceEEEEEecCC----------------------------ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHH
Confidence 8999999999986532 389999999 5799999987655789999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++++||||||+|||++.+ +.++|+|||+++........... .....++..|+|||++.+..
T Consensus 114 ~i~~~l~~lH~~~i~h~dlkp~nili~~~-----~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~- 185 (267)
T cd05066 114 GIASGMKYLSDMGYVHRDLAARNILVNSN-----LVCKVSDFGLSRVLEDDPEAAYT--TRGGKIPIRWTAPEAIAYRK- 185 (267)
T ss_pred HHHHHHHHHHHCCEeehhhchhcEEECCC-----CeEEeCCCCcccccccccceeee--cCCCccceeecCHhHhccCc-
Confidence 99999999999999999999999999887 78999999999876542211111 11223467899999997654
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++||+++ |..||........ .......+.+..+|+.+.+++.+||+.+|.+||++.+++
T Consensus 186 -----~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 260 (267)
T cd05066 186 -----FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIV 260 (267)
T ss_pred -----cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHH
Confidence 4578999999999999886 9999976322111 111122334557889999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 261 ~~l~~ 265 (267)
T cd05066 261 SILDK 265 (267)
T ss_pred HHHHh
Confidence 87764
No 238
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-37 Score=322.24 Aligned_cols=260 Identities=22% Similarity=0.269 Sum_probs=200.2
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNED 259 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei 259 (588)
..+.+..++|.+++.||+|+||.||+|.+. ...||+|++..... .. ....+.+|+
T Consensus 5 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~---~~-------------~~~~~~~E~ 68 (314)
T cd05099 5 PKWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT---DK-------------DLADLISEM 68 (314)
T ss_pred ccccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC---hH-------------HHHHHHHHH
Confidence 446667789999999999999999999763 45799999853211 00 112355688
Q ss_pred HHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----
Q psy4039 260 MLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---- 334 (588)
Q Consensus 260 ~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---- 334 (588)
.+++.+ ..||||+++++++.+.. ..+++|||+ +|+|.+++....
T Consensus 69 ~~l~~l---~~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~i~~~~~~~~ 117 (314)
T cd05099 69 ELMKLI---GKHKNIINLLGVCTQEG----------------------------PLYVIVEYAAKGNLREFLRARRPPGP 117 (314)
T ss_pred HHHHhc---cCCCCeeeEEEEEccCC----------------------------ceEEEEecCCCCcHHHHHHhcCCCcc
Confidence 888776 46999999999887531 389999999 689999997632
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 335 -----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 335 -----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
..+++.++..++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+++..........
T Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~-----~~~kL~Dfg~~~~~~~~~~~~~ 192 (314)
T cd05099 118 DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED-----NVMKIADFGLARGVHDIDYYKK 192 (314)
T ss_pred cccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC-----CcEEEccccccccccccccccc
Confidence 258999999999999999999999999999999999999877 7899999999986543211110
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccH
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPE 479 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~ 479 (588)
. ....+++.|||||++.+.. ++.++|||||||++|||++ |..||........+ ........+..++.
T Consensus 193 ~---~~~~~~~~y~aPE~~~~~~------~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (314)
T cd05099 193 T---SNGRLPVKWMAPEALFDRV------YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTH 263 (314)
T ss_pred c---ccCCCCccccCHHHHccCC------cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 1 1123456899999987654 4578999999999999999 88998663221111 11222345567889
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
++++++.+||+.||++|||+.++++.|+..
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 264 ELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 999999999999999999999999977754
No 239
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.4e-37 Score=316.76 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=195.8
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
..++|.+.+.||+|+||.||+|.+. +..||+|.+...... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~----------------~~~~~~~~e~~~l~~l- 66 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE----------------QDESDFLMEALIMSKF- 66 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH----------------HHHHHHHHHHHHHHhC-
Confidence 3478999999999999999999985 367999987421110 0123456688888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc------CCCCH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC------AQLSM 339 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~------~~l~~ 339 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++.... ..+++
T Consensus 67 ---~~~~i~~~~~~~~~~~----------------------------~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~ 115 (277)
T cd05036 67 ---NHQNIVRLIGVSFERL----------------------------PRFILLELMAGGDLKSFLRENRPRPERPSSLTM 115 (277)
T ss_pred ---CCCCEeeEEEEEccCC----------------------------CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCH
Confidence 9999999999887632 278999999 689999998653 25899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccch
Q psy4039 340 HERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAP 419 (588)
Q Consensus 340 ~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~AP 419 (588)
..+..++.||+.||.|||+++++||||||+|||++.+.+. ..+||+|||+++......... ......+++.|+||
T Consensus 116 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~--~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aP 190 (277)
T cd05036 116 KDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPG--RVAKIADFGMARDIYRASYYR---KGGRAMLPIKWMPP 190 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCC--cceEeccCccccccCCcccee---cCCCCCccHhhCCH
Confidence 9999999999999999999999999999999999865221 468999999998753321111 01122345689999
Q ss_pred hHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 420 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 420 E~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
|++.+.. ++.++|||||||++|||++ |..||.+....... .....+..+..+|..+.+++.+||+.||++
T Consensus 191 E~~~~~~------~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~ 264 (277)
T cd05036 191 EAFLDGI------FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPED 264 (277)
T ss_pred HHHhcCC------cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCccc
Confidence 9997654 4578999999999999997 99999764221111 112233455678999999999999999999
Q ss_pred CCCHHHHHHHHh
Q psy4039 496 RPSAELAATVCQ 507 (588)
Q Consensus 496 Rps~~e~l~~L~ 507 (588)
|||+.++++.|+
T Consensus 265 Rps~~~vl~~l~ 276 (277)
T cd05036 265 RPNFATILERIQ 276 (277)
T ss_pred CcCHHHHHHHhh
Confidence 999999988654
No 240
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-37 Score=318.74 Aligned_cols=260 Identities=18% Similarity=0.185 Sum_probs=196.5
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|...+.||+|+||.||++.+. +..||||.+...... .....+.+|+.++.++ ..||
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~----------------~~~~~~~~e~~~l~~~---~~~~ 63 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE----------------KEQKRLLMDLDVVMRS---SDCP 63 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh----------------HHHHHHHHHHHHHHHh---cCCC
Confidence 367778889999999999999986 789999998532111 0223455688888776 4599
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHH---Hh-cCCCCHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLR---ER-CAQLSMHERVLLFTQ 348 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~---~~-~~~l~~~~~~~i~~q 348 (588)
||+++++++.+.. ..+++||++.++|.++.. .. ...+++..+..++.|
T Consensus 64 ~iv~~~~~~~~~~----------------------------~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~ 115 (288)
T cd06616 64 YIVKFYGALFREG----------------------------DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVA 115 (288)
T ss_pred CEeeeeeEEecCC----------------------------cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 9999999887531 388999999877665443 22 347999999999999
Q ss_pred HHHHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 349 LLEGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 349 l~~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
+++||+|||+. +|+||||||+||+++.+ +.++|+|||+++........ ....||+.|+|||++.+...
T Consensus 116 i~~~l~~lh~~~~i~H~dlkp~Nil~~~~-----~~~kl~dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~ 184 (288)
T cd06616 116 TVKALNYLKEELKIIHRDVKPSNILLDRN-----GNIKLCDFGISGQLVDSIAK------TRDAGCRPYMAPERIDPSAR 184 (288)
T ss_pred HHHHHHHHhhcCCeeccCCCHHHEEEccC-----CcEEEeecchhHHhccCCcc------ccccCccCccCHHHhccccc
Confidence 99999999974 99999999999999987 78999999999765432111 13458999999999875520
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc----cccccccC----CCCCCccHHHHHHHHHhhhhCCCCCCCH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----DYEVNALP----QLNTNVPEVMRRLVAKLLENDPSDRPSA 499 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~----~~~~~~~~----~~~~~~~~~l~~Li~~~L~~dP~~Rps~ 499 (588)
..++.++|||||||++|||++|+.||....... .......+ ..+..++.++.+|+.+||+.||++|||+
T Consensus 185 ---~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~ 261 (288)
T cd06616 185 ---DGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKY 261 (288)
T ss_pred ---cCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCH
Confidence 014578999999999999999999996532100 00001111 1223578999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCccccCCCCCh
Q psy4039 500 ELAATVCQLYLWAPKHWLYGATPSH 524 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~~~~~~ 524 (588)
++++. |||++......
T Consensus 262 ~~i~~---------~~~~~~~~~~~ 277 (288)
T cd06616 262 KELLE---------HPFIKDYEERN 277 (288)
T ss_pred HHHhc---------Chhhhchhhcc
Confidence 99999 99997544333
No 241
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-37 Score=312.16 Aligned_cols=244 Identities=23% Similarity=0.344 Sum_probs=196.0
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|+||.||++.+. +..||+|.++..... ...+.+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~i 60 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS----------------SAVEDSRKEAVLLAKM----KHPNI 60 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch----------------HHHHHHHHHHHHHHhC----CCCCc
Confidence 5889999999999999999987 789999998532111 0123445688888877 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. .++++|||+ +++|.+++... ...+++..+..++.|++.|
T Consensus 61 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 112 (255)
T cd08219 61 VAFKESFEADG----------------------------HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112 (255)
T ss_pred ceEEEEEEECC----------------------------EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 99999987632 499999999 57999998763 3468999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+|+||||+||+++++ +.++|+|||.++........ .....|++.|+|||++.+..
T Consensus 113 l~~lH~~~i~H~dl~p~nili~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~------ 176 (255)
T cd08219 113 VQHIHEKRVLHRDIKSKNIFLTQN-----GKVKLGDFGSARLLTSPGAY-----ACTYVGTPYYVPPEIWENMP------ 176 (255)
T ss_pred HHHHhhCCcccCCCCcceEEECCC-----CcEEEcccCcceeecccccc-----cccccCCccccCHHHHccCC------
Confidence 999999999999999999999887 78999999999765432111 11356899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++||||||+++|+|++|..||........ .........+..++..+++++.+||+.||++|||+.++++
T Consensus 177 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 177 YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 45789999999999999999999976432211 1122333456678899999999999999999999999876
No 242
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-37 Score=314.83 Aligned_cols=251 Identities=26% Similarity=0.365 Sum_probs=197.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..||||.+....... ......+.+|+.+++.+ .|||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~--------------~~~~~~~~~e~~~l~~~----~h~~ 63 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD--------------AKARADCIKEIDLLKQL----NHPN 63 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh--------------HHHHHHHHHHHHHHHHc----cCCc
Confidence 67899999999999999999975 8899999885322110 00123556789999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql 349 (588)
|+++++++.+.. ..+++|||+ +++|.+++... ...+++..++.++.|+
T Consensus 64 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (267)
T cd08229 64 VIKYYASFIEDN----------------------------ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQL 115 (267)
T ss_pred hhhhhheeEeCC----------------------------eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 999999887632 489999999 57999998742 3468999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||++||+|+||||+||+++.+ +.++|+|||++......... .....|+..|+|||++.+..
T Consensus 116 ~~~l~~LH~~~i~H~dl~p~nili~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~ape~~~~~~--- 182 (267)
T cd08229 116 CSALEHMHSRRVMHRDIKPANVFITAT-----GVVKLGDLGLGRFFSSKTTA-----AHSLVGTPYYMSPERIHENG--- 182 (267)
T ss_pred HHHHHHHHHCCeecCCCCHHHEEEcCC-----CCEEECcchhhhccccCCcc-----cccccCCcCccCHHHhcCCC---
Confidence 999999999999999999999999877 78999999998765432211 11346899999999987654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccc-----cccccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT-----DYEVNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-----~~~~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++||||||+++|||++|..||.+..... .......++. +..+++++++++.+||+.||++|||+++++
T Consensus 183 ---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~ 259 (267)
T cd08229 183 ---YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVY 259 (267)
T ss_pred ---ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence 3467999999999999999999997532210 0111112222 345788999999999999999999999998
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.+..
T Consensus 260 ~~~~~ 264 (267)
T cd08229 260 DVAKR 264 (267)
T ss_pred HHHhh
Confidence 87664
No 243
>KOG0983|consensus
Probab=100.00 E-value=1.1e-38 Score=307.95 Aligned_cols=279 Identities=20% Similarity=0.237 Sum_probs=217.7
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+....++++++....||.|+.|.|++++++ |...|||.|+..+...+. +++...+.++...
T Consensus 85 ~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~----------------kRILmDldvv~~s- 147 (391)
T KOG0983|consen 85 QRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEEN----------------KRILMDLDVVLKS- 147 (391)
T ss_pred cccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHH----------------HHHHHhhhHHhhc-
Confidence 334556688889999999999999999998 699999999754322111 1223344444332
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
-..|+||+.+|+|.... .+++.||.|...++++++.-..+++|..+-++.
T Consensus 148 --~dcpyIV~c~GyFi~n~----------------------------dV~IcMelMs~C~ekLlkrik~piPE~ilGk~t 197 (391)
T KOG0983|consen 148 --HDCPYIVQCFGYFITNT----------------------------DVFICMELMSTCAEKLLKRIKGPIPERILGKMT 197 (391)
T ss_pred --cCCCeeeeeeeEEeeCc----------------------------hHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhH
Confidence 24799999999998632 388999999877888887665589999999999
Q ss_pred HHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 347 TQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 347 ~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
..+++||.||-+ ++|+|||+||+|||+|+. +++||||||++-..-+. ...+...|-+.|||||.+.-.
T Consensus 198 va~v~AL~YLKeKH~viHRDvKPSNILlDe~-----GniKlCDFGIsGrlvdS------kAhtrsAGC~~YMaPERidp~ 266 (391)
T KOG0983|consen 198 VAIVKALYYLKEKHGVIHRDVKPSNILLDER-----GNIKLCDFGISGRLVDS------KAHTRSAGCAAYMAPERIDPP 266 (391)
T ss_pred HHHHHHHHHHHHhcceeecccCccceEEccC-----CCEEeecccccceeecc------cccccccCCccccCccccCCC
Confidence 999999999997 699999999999999988 99999999998654332 222356799999999999654
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCC--CCccHHHHHHHHHhhhhCCCCCCCH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLN--TNVPEVMRRLVAKLLENDPSDRPSA 499 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~--~~~~~~l~~Li~~~L~~dP~~Rps~ 499 (588)
..+ .|.-++||||||++++||.||..||.+....... .....|.++ ..+++++++++..||++|+.+||..
T Consensus 267 ~~~---kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y 343 (391)
T KOG0983|consen 267 DKP---KYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKY 343 (391)
T ss_pred CCC---ccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcch
Confidence 211 1456799999999999999999999874222111 112223333 3489999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCccccCCCCChhHHHHHHHhhhcc
Q psy4039 500 ELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLTLTTK 537 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~~~~~ 537 (588)
.++++ |||+....+...++.+|......+
T Consensus 344 ~~Ll~---------h~Fi~~ye~a~~dVa~WF~dV~~~ 372 (391)
T KOG0983|consen 344 NKLLE---------HPFIKRYETAEVDVASWFKDVMAK 372 (391)
T ss_pred HHHhc---------CcceeecchhhccHHHHHHHHHhc
Confidence 99999 999998888889999999876544
No 244
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.8e-37 Score=321.00 Aligned_cols=260 Identities=24% Similarity=0.267 Sum_probs=196.8
Q ss_pred CeEEeeeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.|++.+.||+|+||.||+|.+. +..||||.+.......+ ...+...+|+.++..+ +||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l----~h~ 62 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYT--------------GISQSACREIALLREL----KHE 62 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccccc--------------CccHHHHHHHHHHHhc----CCC
Confidence 4788999999999999999984 58999999854221000 1223445688898887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc----CCCCHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC----AQLSMHERVLLFTQ 348 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~----~~l~~~~~~~i~~q 348 (588)
||+++++++.+.. ...+++||||++++|.+++.... ..+++..++.++.|
T Consensus 63 ~i~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~q 116 (316)
T cd07842 63 NVVSLVEVFLEHA--------------------------DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ 116 (316)
T ss_pred CccceEEEEeCCC--------------------------CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHH
Confidence 9999999987631 12599999999888888876431 26899999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||.|||+++|+||||||+||+++.++.. .+.+||+|||+++........ ........||+.|+|||++.+...
T Consensus 117 i~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~-~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~- 192 (316)
T cd07842 117 ILNGVHYLHSNWVLHRDLKPANILVMGEGPE-RGVVKIGDLGLARLFNAPLKP--LADLDPVVVTIWYRAPELLLGARH- 192 (316)
T ss_pred HHHHHHHHHhCCEeeCCCCHHHEEEcCCCCc-cceEEECCCccccccCCCccc--ccccCCccccccccCHHHHhCCCC-
Confidence 9999999999999999999999999983221 189999999999876442221 111124568999999999865431
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc---------------------------------ccc----ccccC
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------------------------------DYE----VNALP 471 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------------------------------~~~----~~~~~ 471 (588)
++.++|||||||++|||++|++||.+..... .+. .....
T Consensus 193 ----~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (316)
T cd07842 193 ----YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTK 268 (316)
T ss_pred ----CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCC
Confidence 3567999999999999999999997532211 000 00000
Q ss_pred CCC-----------CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 472 QLN-----------TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 472 ~~~-----------~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
..+ ...+.++.+++.+||+.||++|||++++++ |||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~---------~~~f 316 (316)
T cd07842 269 TYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE---------HPYF 316 (316)
T ss_pred CCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc---------CCCC
Confidence 011 145678999999999999999999999999 9996
No 245
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.9e-37 Score=310.51 Aligned_cols=249 Identities=23% Similarity=0.326 Sum_probs=199.4
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|... +..+|||.+........ ....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~---------------~~~~~~~e~~~l~~~----~~~~i 61 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKD---------------ERLAAQNECQVLKLL----SHPNI 61 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccH---------------HHHHHHHHHHHHhhC----CCCch
Confidence 5889999999999999999886 78999999854321110 123456788899887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++.+... ...++||||+ +++|.+++... ...+++..+..++.|+++|
T Consensus 62 ~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 113 (256)
T cd08220 62 IEYYENFLED----------------------------KALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA 113 (256)
T ss_pred hheeeeEecC----------------------------CEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 9999887652 1489999999 57999999875 3358999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+||+++.+. ..++|+|||++........ .....|+..|+|||.+.+..
T Consensus 114 l~~lh~~~i~h~dl~~~nil~~~~~----~~~~l~d~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~------ 177 (256)
T cd08220 114 LHHVHTKLILHRDLKTQNILLDKHK----MVVKIGDFGISKILSSKSK------AYTVVGTPCYISPELCEGKP------ 177 (256)
T ss_pred HHHHHhCCeecCCCCHHHEEEcCCC----CEEEEccCCCceecCCCcc------ccccccCCcccCchhccCCC------
Confidence 9999999999999999999998652 4689999999987644221 11356889999999987543
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++||||||+++|+|++|+.||......... ......+++..+++++++++.+||+.||++|||++++++
T Consensus 178 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~----- 252 (256)
T cd08220 178 YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA----- 252 (256)
T ss_pred CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh-----
Confidence 457899999999999999999999764221111 112233456678999999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 253 ----~p~~ 256 (256)
T cd08220 253 ----QPIC 256 (256)
T ss_pred ----CCCC
Confidence 9996
No 246
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.8e-37 Score=311.44 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=201.0
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|+||.||++.+. +..||+|.+....... ...+.+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i 61 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE---------------KEKQQLVSEVNILREL----KHPNI 61 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH---------------HHHHHHHHHHHHHHhc----CCCcc
Confidence 5888999999999999999886 7899999985322111 0123456688899887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql~ 350 (588)
+++++++.+.. ...++++|||+ +++|.+++... ...+++..++.++.|++
T Consensus 62 ~~~~~~~~~~~--------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~ 115 (265)
T cd08217 62 VRYYDRIIDRS--------------------------NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLL 115 (265)
T ss_pred ceeeeeeecCC--------------------------CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence 99998876421 22489999999 57999999764 34799999999999999
Q ss_pred HHHHHHH-----hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 351 EGVTHLN-----MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 351 ~gL~yLH-----~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
.||.||| +.+|+|+||||+||+++.+ +.+||+|||++......... .....|++.|+|||++.+.
T Consensus 116 ~~l~~lH~~~~~~~~i~h~dl~p~nili~~~-----~~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~~pE~~~~~ 185 (265)
T cd08217 116 LALYECHNRSDPGNTVLHRDLKPANIFLDAN-----NNVKLGDFGLAKILGHDSSF-----AKTYVGTPYYMSPEQLNHM 185 (265)
T ss_pred HHHHHHhcCccccCcceecCCCHHHEEEecC-----CCEEEecccccccccCCccc-----ccccccCCCccChhhhcCC
Confidence 9999999 8999999999999999987 89999999999876543211 1134689999999998665
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
. .+.++||||||+++|+|++|..||....... .......+.++..++.++.+++.+||+.+|++||++.++
T Consensus 186 ~------~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~i 259 (265)
T cd08217 186 S------YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259 (265)
T ss_pred C------CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 4 4467999999999999999999997642111 111223345566788999999999999999999999999
Q ss_pred HHHHhhhhhcCCccc
Q psy4039 503 ATVCQLYLWAPKHWL 517 (588)
Q Consensus 503 l~~L~~~~~~~h~w~ 517 (588)
++ |||+
T Consensus 260 l~---------~~~~ 265 (265)
T cd08217 260 LQ---------LPLI 265 (265)
T ss_pred hh---------CCCC
Confidence 99 9996
No 247
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-37 Score=312.58 Aligned_cols=247 Identities=23% Similarity=0.284 Sum_probs=195.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..+|+|.+...... ..+.+.+|+.+++.+ +|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------~~~~~~~e~~~l~~~----~h~~ 61 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-----------------DFEIIQQEISMLKEC----RHPN 61 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-----------------hHHHHHHHHHHHHhC----CCCC
Confidence 78999999999999999999986 678999998532110 123456788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. .++++|||+ +++|.+++......+++.++..++.|++.|
T Consensus 62 i~~~~~~~~~~~----------------------------~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~ 113 (262)
T cd06613 62 IVAYFGSYLRRD----------------------------KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKG 113 (262)
T ss_pred hhceEEEEEeCC----------------------------EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 999999887632 499999999 479999998764589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+|+||||+||+++.+ +.+||+|||++........ ......|+..|+|||++.+... ..
T Consensus 114 l~~lh~~~i~h~dl~p~ni~i~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~---~~ 180 (262)
T cd06613 114 LAYLHETGKIHRDIKGANILLTED-----GDVKLADFGVSAQLTATIA-----KRKSFIGTPYWMAPEVAAVERK---GG 180 (262)
T ss_pred HHHHHhCCceecCCChhhEEECCC-----CCEEECccccchhhhhhhh-----ccccccCCccccCchhhccccc---CC
Confidence 999999999999999999999987 7899999999876543211 1123568889999999865511 01
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc---cc----ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VN----ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~----~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++|||||||++|||++|..||.......... .. ........++.++++++.+||..||.+|||+++++.
T Consensus 181 ~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 181 YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 4468999999999999999999997632111110 00 011123356788999999999999999999999998
No 248
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.1e-37 Score=312.89 Aligned_cols=244 Identities=24% Similarity=0.342 Sum_probs=195.8
Q ss_pred cccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+.+++|++.+.||+|+||.||++...+..||+|.+.... ....+.+|+.+++.+ +||
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~-------------------~~~~~~~e~~~l~~~----~~~ 59 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV-------------------TAQAFLEETAVMTKL----HHK 59 (254)
T ss_pred ccHHHceeeeeeccCCCCceEecccCCCceEEEeecCcc-------------------hHHHHHHHHHHHHhC----CCC
Confidence 456889999999999999999999889999999984211 123456788888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLL 350 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~ 350 (588)
||+++++++... ..+++|||+ +++|.+++.... ..+++..+..++.|++
T Consensus 60 ~i~~~~~~~~~~-----------------------------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 110 (254)
T cd05083 60 NLVRLLGVILHN-----------------------------GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVA 110 (254)
T ss_pred CcCeEEEEEcCC-----------------------------CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHH
Confidence 999999987642 268999999 579999998653 3589999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||+.|++||||||+||+++.+ +.+||+|||+++....... ....+..|+|||++.+..
T Consensus 111 ~al~~lH~~~~~H~dl~p~nili~~~-----~~~kl~Dfg~~~~~~~~~~--------~~~~~~~y~~pe~~~~~~---- 173 (254)
T cd05083 111 EGMEYLESKKLVHRDLAARNILVSED-----GVAKVSDFGLARVGSMGVD--------NSKLPVKWTAPEALKHKK---- 173 (254)
T ss_pred HHHHHHHhCCeeccccCcceEEEcCC-----CcEEECCCccceeccccCC--------CCCCCceecCHHHhccCC----
Confidence 99999999999999999999999887 7899999999876433211 123456899999986544
Q ss_pred CCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++|||||||++|||++ |+.||....... .......+..+..+|+.+.+++.+||+.+|++||+++++++.+
T Consensus 174 --~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 251 (254)
T cd05083 174 --FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKL 251 (254)
T ss_pred --cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 4578999999999999997 999997642211 1111222334567889999999999999999999999998865
Q ss_pred h
Q psy4039 507 Q 507 (588)
Q Consensus 507 ~ 507 (588)
+
T Consensus 252 ~ 252 (254)
T cd05083 252 E 252 (254)
T ss_pred c
Confidence 4
No 249
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.8e-37 Score=316.89 Aligned_cols=247 Identities=24% Similarity=0.333 Sum_probs=188.8
Q ss_pred eecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 203 FIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
.||+|+||.||++.+. ++.||||.+.+....... ......+|..+++.+ ....||||+.++++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 65 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------------GETLALNERIMLSLV-STGDCPFIVCMTYA 65 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccch--------------HHHHHHHHHHHHHHH-hhCCCCcEeEEEEE
Confidence 4899999999999986 789999998643222111 011122233333222 22479999999988
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
+.... ..++||||+ +++|.+++..+. .+++..+..++.|++.||.|||++
T Consensus 66 ~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~ 116 (279)
T cd05633 66 FHTPD----------------------------KLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNR 116 (279)
T ss_pred EecCC----------------------------eEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 87532 489999999 689999998664 799999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
+|+||||||+|||++.+ +.++|+|||++........ ....||+.|+|||.+..... .+.++||
T Consensus 117 ~ivH~dikp~Nil~~~~-----~~~~l~dfg~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~-----~~~~~Di 179 (279)
T cd05633 117 FVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKP-------HASVGTHGYMAPEVLQKGTA-----YDSSADW 179 (279)
T ss_pred CcCCCCCCHHHEEECCC-----CCEEEccCCcceeccccCc-------cCcCCCcCccCHHHhcCCCC-----CCchhhh
Confidence 99999999999999987 7899999999875533211 13468999999999864221 4578999
Q ss_pred hhHHHHHHHHhcCCCCCcccccccc-----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhh
Q psy4039 440 WTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLY 509 (588)
Q Consensus 440 wS~Gvil~ElltG~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~ 509 (588)
||+||++|||++|..||........ ........++..+++++++++.+||..||.+|| +++++++
T Consensus 180 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~----- 254 (279)
T cd05633 180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE----- 254 (279)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh-----
Confidence 9999999999999999965321110 111223345677899999999999999999999 6999888
Q ss_pred hhcCCccccC
Q psy4039 510 LWAPKHWLYG 519 (588)
Q Consensus 510 ~~~~h~w~~~ 519 (588)
|||++.
T Consensus 255 ----h~~~~~ 260 (279)
T cd05633 255 ----HVFFKG 260 (279)
T ss_pred ----CccccC
Confidence 999975
No 250
>KOG0690|consensus
Probab=100.00 E-value=4.1e-39 Score=317.03 Aligned_cols=262 Identities=23% Similarity=0.358 Sum_probs=212.1
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccch--hhhHHHHHhhhc
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPL--RLNEDMLMNSVE 266 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~--~~~Ei~il~~l~ 266 (588)
..+..++|+..++||+|.||.|..|+-+ ++.||+|++++.. +..+.+. -..|-.+|+..
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKev----------------iiakdEVAHTlTE~RVL~~~- 225 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEV----------------IIAKDEVAHTLTENRVLQNC- 225 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhh----------------eeehHHhhhhhhHHHHHHhc-
Confidence 4578899999999999999999999987 8999999985422 2222111 12467788887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
+||.+..|-..|+.. ..++.||||. +|.|.-.|...+ .+++..+..+
T Consensus 226 ---~HPFLt~LKYsFQt~----------------------------drlCFVMeyanGGeLf~HLsrer-~FsE~RtRFY 273 (516)
T KOG0690|consen 226 ---RHPFLTSLKYSFQTQ----------------------------DRLCFVMEYANGGELFFHLSRER-VFSEDRTRFY 273 (516)
T ss_pred ---cCcHHHHhhhhhccC----------------------------ceEEEEEEEccCceEeeehhhhh-cccchhhhhh
Confidence 999999887776653 3599999999 578988887654 8999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
-..|+.||.|||+++||.||||.+|+|+|.+ +++||+|||+|+.--. +...+.++||||.|+|||++...
T Consensus 274 GaEIvsAL~YLHs~~ivYRDlKLENLlLDkD-----GHIKitDFGLCKE~I~-----~g~t~kTFCGTPEYLAPEVleDn 343 (516)
T KOG0690|consen 274 GAEIVSALGYLHSRNIVYRDLKLENLLLDKD-----GHIKITDFGLCKEEIK-----YGDTTKTFCGTPEYLAPEVLEDN 343 (516)
T ss_pred hHHHHHHhhhhhhCCeeeeechhhhheeccC-----CceEeeecccchhccc-----ccceeccccCChhhcCchhhccc
Confidence 9999999999999999999999999999999 9999999999986322 22233479999999999999876
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccccc--ccCCCCCCccHHHHHHHHHhhhhCCCCCCC--HHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVN--ALPQLNTNVPEVMRRLVAKLLENDPSDRPS--AEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps--~~e 501 (588)
. |+.++|+|.+||++|||+||+.||++......++.. ....+|..++++++.|+..+|.+||.+|.. .++
T Consensus 344 D------YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdD 417 (516)
T KOG0690|consen 344 D------YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDD 417 (516)
T ss_pred c------ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchh
Confidence 6 557799999999999999999999987555554432 223578899999999999999999999974 567
Q ss_pred HHHHHhhhhhcCCccc
Q psy4039 502 AATVCQLYLWAPKHWL 517 (588)
Q Consensus 502 ~l~~L~~~~~~~h~w~ 517 (588)
+.++.+.-+++.-.|-
T Consensus 418 akEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 418 AKEIMRHRFFASVDWE 433 (516)
T ss_pred HHHHHhhhhhccCCHH
Confidence 7777775555555553
No 251
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.3e-37 Score=310.49 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=200.1
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||++... ++.||||.+....... .....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i 61 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP---------------KEREESRKEVAVLSNM----KHPNI 61 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh---------------HHHHHHHHHHHHHHhC----CCCCe
Confidence 5889999999999999999886 7899999985321110 0123456788888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+. ...++||||+ +++|.+++... ...+++.++..++.|++.|
T Consensus 62 ~~~~~~~~~~----------------------------~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (256)
T cd08218 62 VQYQESFEEN----------------------------GNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLA 113 (256)
T ss_pred eeeEeeecCC----------------------------CeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 9999988652 2489999999 67999999764 3368999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++++|+||+|+|||++.+ +.++|+|||++......... .....|++.|+|||++.+..
T Consensus 114 l~~lh~~~i~h~~l~~~nil~~~~-----~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~------ 177 (256)
T cd08218 114 LKHVHDRKILHRDIKSQNIFLTKD-----GTIKLGDFGIARVLNSTVEL-----ARTCIGTPYYLSPEICENRP------ 177 (256)
T ss_pred HHHHHhCCEecCCCCHHHEEEcCC-----CCEEEeeccceeecCcchhh-----hhhccCCccccCHHHhCCCC------
Confidence 999999999999999999999887 78999999999765442211 11345889999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|+|++|..||......... .....+..+..++.++.++|.+||+.+|++||++.++++
T Consensus 178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~----- 252 (256)
T cd08218 178 YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE----- 252 (256)
T ss_pred CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh-----
Confidence 446899999999999999999999754221111 122334456678999999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
||||
T Consensus 253 ----~~~~ 256 (256)
T cd08218 253 ----KNFI 256 (256)
T ss_pred ----CcCC
Confidence 9996
No 252
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-37 Score=317.96 Aligned_cols=251 Identities=22% Similarity=0.252 Sum_probs=195.8
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
..++|...++||+|+||.||++... +..+|+|.+.... ......+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-----------------~~~~~~~~~e~~~l~~l- 64 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----------------ESARQDFQREAELLTVL- 64 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-----------------HHHHHHHHHHHHHHhcC-
Confidence 4478899999999999999999753 5689999874211 01223567788888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----------
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----------- 334 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----------- 334 (588)
+||||+++++++.+.. ..+++|||+ +++|.+++....
T Consensus 65 ---~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 113 (280)
T cd05092 65 ---QHQHIVRFYGVCTEGR----------------------------PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGED 113 (280)
T ss_pred ---CCCCCceEEEEEecCC----------------------------ceEEEEecCCCCCHHHHHHhcCcchhhhccccc
Confidence 9999999999887632 389999999 689999997642
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccccccccc
Q psy4039 335 ---AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELG 411 (588)
Q Consensus 335 ---~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~ 411 (588)
..+++..+..++.|++.||+|||++||+||||||+|||++++ +.+||+|||+++......... ......
T Consensus 114 ~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~-----~~~kL~dfg~~~~~~~~~~~~---~~~~~~ 185 (280)
T cd05092 114 VAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG-----LVVKIGDFGMSRDIYSTDYYR---VGGRTM 185 (280)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC-----CCEEECCCCceeEcCCCceee---cCCCcc
Confidence 248999999999999999999999999999999999999977 789999999997653321111 111234
Q ss_pred CCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHH
Q psy4039 412 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAK 487 (588)
Q Consensus 412 GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~ 487 (588)
+++.|+|||++.+.. .+.++|||||||++|||++ |.+||......... ........+..+|+.+.+++.+
T Consensus 186 ~~~~y~aPE~~~~~~------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 259 (280)
T cd05092 186 LPIRWMPPESILYRK------FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQG 259 (280)
T ss_pred ccccccCHHHhccCC------cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHH
Confidence 578899999987654 4578999999999999998 89998653221111 1122234456789999999999
Q ss_pred hhhhCCCCCCCHHHHHHHHh
Q psy4039 488 LLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 488 ~L~~dP~~Rps~~e~l~~L~ 507 (588)
||+.||.+||++++++..|+
T Consensus 260 cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 260 CWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HccCChhhCCCHHHHHHHHh
Confidence 99999999999999988664
No 253
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.1e-37 Score=313.49 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=200.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|++.+.||+|+||.||+|.+. +..||||.+....... ....+.+|+.+++.+.. ..||||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~----------------~~~~~~~e~~~l~~l~~-~~~~~v 64 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD----------------DVSDIQREVALLSQLRQ-SQPPNI 64 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCch----------------hHHHHHHHHHHHHHhcc-CCCCCe
Confidence 4777889999999999999985 7899999985321110 12235568888888722 259999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..+++|||+ +++|.+++... .+++..+..++.|++.||
T Consensus 65 i~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l 114 (277)
T cd06917 65 TKYYGSYLKGP----------------------------RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVAL 114 (277)
T ss_pred eeEeeeeeeCC----------------------------EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHH
Confidence 99999887531 489999999 67999998764 899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||+|+||+++.+ +.++|+|||++........ ......|+..|+|||.+..... .
T Consensus 115 ~~lh~~~i~H~dl~p~ni~i~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~-----~ 179 (277)
T cd06917 115 KYIHKVGVIHRDIKAANILVTNT-----GNVKLCDFGVAALLNQNSS-----KRSTFVGTPYWMAPEVITEGKY-----Y 179 (277)
T ss_pred HHHHhCCcccCCcCHHHEEEcCC-----CCEEEccCCceeecCCCcc-----ccccccCCcceeCHHHhccCCc-----c
Confidence 99999999999999999999987 7899999999977654321 1123568999999999864321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc---ccccCCCCC-CccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNALPQLNT-NVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~~~~~~~-~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++|||||||++|+|++|..||.......... ....+.++. .++.++.+++.+||+.||++||++.+++.
T Consensus 180 ~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~----- 254 (277)
T cd06917 180 DTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK----- 254 (277)
T ss_pred ccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh-----
Confidence 468999999999999999999997643222111 112223333 37889999999999999999999999998
Q ss_pred hhcCCccccCCCCC
Q psy4039 510 LWAPKHWLYGATPS 523 (588)
Q Consensus 510 ~~~~h~w~~~~~~~ 523 (588)
|+|++.....
T Consensus 255 ----~~~~~~~~~~ 264 (277)
T cd06917 255 ----SKWIKAHSKT 264 (277)
T ss_pred ----ChHhhccccC
Confidence 9999854443
No 254
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3e-37 Score=317.14 Aligned_cols=255 Identities=21% Similarity=0.238 Sum_probs=197.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. ++.||||.+......... ......+..|+.+++.+ +||||
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~------------~~~~~~~~~e~~~l~~~----~h~~i 64 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK------------DGINFTALREIKLLQEL----KHPNI 64 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccccc------------chhhHHHHHHHHHHhhc----CCCCC
Confidence 4788899999999999999986 789999999643322110 00123345688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.+. ...++||||++++|.+++......+++..+..++.||++||.
T Consensus 65 ~~~~~~~~~~----------------------------~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~ 116 (298)
T cd07841 65 IGLLDVFGHK----------------------------SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLE 116 (298)
T ss_pred hhhhheeecC----------------------------CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence 9999998762 148999999988999999876446999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+||+++.+ +.++|+|||+++........ .....+++.|+|||++.+... .+
T Consensus 117 ~lH~~~i~H~dl~p~nill~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~-----~~ 181 (298)
T cd07841 117 YLHSNWILHRDLKPNNLLIASD-----GVLKLADFGLARSFGSPNRK-----MTHQVVTRWYRAPELLFGARH-----YG 181 (298)
T ss_pred HHHhCCeeecCCChhhEEEcCC-----CCEEEccceeeeeccCCCcc-----ccccccceeeeCHHHHhCCCC-----CC
Confidence 9999999999999999999987 78999999999876542211 112346889999999854321 35
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccccc------------------------c-ccc-----cCCCCCCccHHHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------------------------E-VNA-----LPQLNTNVPEVMRRL 484 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------------------------~-~~~-----~~~~~~~~~~~l~~L 484 (588)
.++|||||||++|||++|.+||.+....... . ... .......++.++.++
T Consensus 182 ~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (298)
T cd07841 182 VGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDL 261 (298)
T ss_pred cHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHH
Confidence 6799999999999999998877542211000 0 000 001123457889999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 485 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 485 i~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
|.+||+.||++|||+.+++. |+|++.
T Consensus 262 i~~~l~~~P~~R~s~~e~l~---------~~~~~~ 287 (298)
T cd07841 262 LQRLLTLNPNKRITARQALE---------HPYFSN 287 (298)
T ss_pred HHHHhcCCcccCcCHHHHhh---------CccccC
Confidence 99999999999999999999 999984
No 255
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2e-37 Score=318.03 Aligned_cols=254 Identities=22% Similarity=0.275 Sum_probs=196.3
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+++|++.+.||+|++|.||+|.+. ++.||||.+...... ......+.+|+.+++.+ +||
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~h~ 61 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---------------EGVPSTAIREISLLKEM----QHG 61 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---------------ccchHHHHHHHHHHHhc----cCC
Confidence 378999999999999999999986 789999998432110 01223456788999887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..++||||++++|.+++.... ..+++..+..++.||+.
T Consensus 62 ~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~ 113 (294)
T PLN00009 62 NIVRLQDVVHSEK----------------------------RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILR 113 (294)
T ss_pred CEeeEEEEEecCC----------------------------eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHH
Confidence 9999999987632 499999999889998887543 24688899999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||+|||+++|+||||||+||+++.+. ..+||+|||++........ ......|++.|+|||++.+...
T Consensus 114 aL~~LH~~~i~H~dl~p~nill~~~~----~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~---- 180 (294)
T PLN00009 114 GIAYCHSHRVLHRDLKPQNLLIDRRT----NALKLADFGLARAFGIPVR-----TFTHEVVTLWYRAPEILLGSRH---- 180 (294)
T ss_pred HHHHHHhCCeeCCCCCcceEEEECCC----CEEEEcccccccccCCCcc-----ccccCceeecccCHHHHhCCCC----
Confidence 99999999999999999999998542 5789999999976543211 1113457899999999865321
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccccc-----------------------cccC--------CCCCCccHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV-----------------------NALP--------QLNTNVPEV 480 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~-----------------------~~~~--------~~~~~~~~~ 480 (588)
.+.++||||+||++|+|++|.+||........... ...+ .....++++
T Consensus 181 -~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (294)
T PLN00009 181 -YSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPA 259 (294)
T ss_pred -CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChH
Confidence 45689999999999999999999965311100000 0000 012356788
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+.+++.+||+.||++||+++++++ |||+.
T Consensus 260 ~~~~i~~~l~~~P~~Rps~~~~l~---------~~~~~ 288 (294)
T PLN00009 260 GVDLLSKMLRLDPSKRITARAALE---------HEYFK 288 (294)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc---------CchHh
Confidence 999999999999999999999999 99997
No 256
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.8e-37 Score=315.25 Aligned_cols=252 Identities=22% Similarity=0.264 Sum_probs=194.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.+|++.+.||+|+||.||+|.+. +..||||.+.... .. ..+.+.+|+.+++.+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-----~~------------~~~~~~~e~~~l~~l---- 62 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-----AE------------HLRDFEREIEILKSL---- 62 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-----HH------------HHHHHHHHHHHHHhC----
Confidence 67899999999999999999853 7789999984311 00 123456788999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+||||+++++++.... ...+++||||+ +++|.+++......+++..+..++.|
T Consensus 63 ~h~~iv~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~ 116 (284)
T cd05081 63 QHDNIVKYKGVCYSAG--------------------------RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ 116 (284)
T ss_pred CCCCeeEEEEEEccCC--------------------------CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHH
Confidence 9999999999875421 12389999999 68999999876557999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||.|||++||+||||||+||+++.+ +.+||+|||+++.......... ......++..|+|||++.+..
T Consensus 117 l~~aL~~LH~~~i~H~dlkp~nili~~~-----~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-- 187 (284)
T cd05081 117 ICKGMEYLGSKRYVHRDLATRNILVESE-----NRVKIGDFGLTKVLPQDKEYYK--VREPGESPIFWYAPESLTESK-- 187 (284)
T ss_pred HHHHHHHHHHCCceeccCCHhhEEECCC-----CeEEECCCcccccccCCCccee--ecCCCCCceEeeCHHHhccCC--
Confidence 9999999999999999999999999987 7899999999987644221100 001123455699999987654
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc-------c------------ccccccCCCCCCccHHHHHHHHHhh
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT-------D------------YEVNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~-------~------------~~~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
++.++|||||||++|||++|..|+....... . .......+.+..++.++.+++.+||
T Consensus 188 ----~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl 263 (284)
T cd05081 188 ----FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECW 263 (284)
T ss_pred ----cChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHc
Confidence 4578999999999999999877754321100 0 0011122345678899999999999
Q ss_pred hhCCCCCCCHHHHHHHHh
Q psy4039 490 ENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~ 507 (588)
..+|++|||+.++++.|+
T Consensus 264 ~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05081 264 NNDPSQRPSFSELALQVE 281 (284)
T ss_pred cCChhhCCCHHHHHHHHH
Confidence 999999999999998776
No 257
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-37 Score=318.62 Aligned_cols=252 Identities=24% Similarity=0.278 Sum_probs=195.3
Q ss_pred CeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
+|++.+.||+|+||.||+|... ...+|+|.+...... .....+.+|+.+++.+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~E~~~l~~l---- 60 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS----------------SELRDLLSEFNLLKQV---- 60 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH----------------HHHHHHHHHHHHHhhC----
Confidence 4778899999999999999875 256999987432110 0123466788999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------------
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------------- 334 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------------- 334 (588)
+||||+++++.+.... ..+++|||+ +++|.+++....
T Consensus 61 ~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 112 (290)
T cd05045 61 NHPHVIKLYGACSQDG----------------------------PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRN 112 (290)
T ss_pred CCCCEeeEEEEEecCC----------------------------CcEEEEEecCCCCHHHHHHhcCCccccccccccccc
Confidence 8999999999887632 378999999 589999987521
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccccc
Q psy4039 335 ---------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSS 405 (588)
Q Consensus 335 ---------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 405 (588)
..+++..++.++.|++.||.|||+++|+||||||+|||++++ +.+||+|||+++.........
T Consensus 113 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~-----~~~kl~dfg~~~~~~~~~~~~--- 184 (290)
T cd05045 113 SSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG-----RKMKISDFGLSRDVYEEDSYV--- 184 (290)
T ss_pred cccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC-----CcEEeccccccccccCccchh---
Confidence 247899999999999999999999999999999999999887 789999999997653321110
Q ss_pred ccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHH
Q psy4039 406 ADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVM 481 (588)
Q Consensus 406 ~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l 481 (588)
......++..|+|||++.+.. .+.++||||||+++|||++ |..||.+....... ........+..++.++
T Consensus 185 ~~~~~~~~~~y~apE~~~~~~------~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
T cd05045 185 KRSKGRIPVKWMAIESLFDHI------YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEM 258 (290)
T ss_pred cccCCCCCccccCHHHHccCC------cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHH
Confidence 011334677899999986544 4578999999999999998 99999764322111 1112234456788999
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
.+++.+||+.||++||+++++++.|+.++
T Consensus 259 ~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 259 YNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999887654
No 258
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.1e-37 Score=312.68 Aligned_cols=260 Identities=24% Similarity=0.296 Sum_probs=197.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|.+.+.||.|+||.||+|... ++.||||.+.......... +.... ...+.+.+|+.+++.+ +||||
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~---~~~~~----~~~~~~~~e~~~l~~l----~h~~i 70 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRH---DSRQK----DMVKALRSEIETLKDL----DHLNI 70 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhccc---chHHH----HHHHHHHHHHHHHHhc----CCCCc
Confidence 4778899999999999999875 7899999985321111000 00000 0123456688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..++||||+ +++|.+++.... .+++..+..++.|++.||
T Consensus 71 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 71 VQYLGFETTEE----------------------------YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred ceEEEEeccCC----------------------------ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHH
Confidence 99999876521 489999999 689999998764 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++++||||||+||+++.+ +.++|+|||+++........ .......|+..|+|||++...... .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~-----~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~----~ 189 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDAD-----GICKISDFGISKKSDDIYDN---DQNMSMQGSVFWMAPEVIHSYSQG----Y 189 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCC-----CeEEEeeccccccccccccc---cccccccCCccccCHHHhccccCC----C
Confidence 99999999999999999999987 79999999999765432111 111245689999999998764321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc----ccccc----CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNAL----PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~----~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
+.++||||||+++||+++|..||......... ..... ......++.++++++.+||+.||++|||++++++
T Consensus 190 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~- 268 (272)
T cd06629 190 SAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ- 268 (272)
T ss_pred CccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh-
Confidence 57899999999999999999999653211100 01111 1223456899999999999999999999999999
Q ss_pred HhhhhhcCCccc
Q psy4039 506 CQLYLWAPKHWL 517 (588)
Q Consensus 506 L~~~~~~~h~w~ 517 (588)
|||+
T Consensus 269 --------~~~~ 272 (272)
T cd06629 269 --------HPFI 272 (272)
T ss_pred --------CCCC
Confidence 9996
No 259
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-38 Score=346.35 Aligned_cols=269 Identities=18% Similarity=0.272 Sum_probs=191.6
Q ss_pred cCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhh--cccccchhhhHHHHHhhhcCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKEL--LPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~--~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.++|++.+.||+|+||+||+|.++ +..+++|.+....... ....+...+.. .......+.+|+.+|+.+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l---- 220 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGK--PKCERLIAKRVKAGSRAAIQLENEILALGRL---- 220 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccc--hhhhhhHhHHhhcchHHHHHHHHHHHHHHhC----
Confidence 478999999999999999999875 3334444331110000 00001111111 111234567899999998
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc----CCCCHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC----AQLSMHERVLL 345 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~----~~l~~~~~~~i 345 (588)
+|||||++++++.+.. ..|++|+++.++|.+++.... ......++..|
T Consensus 221 ~HpnIv~l~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i 272 (501)
T PHA03210 221 NHENILKIEEILRSEA----------------------------NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAI 272 (501)
T ss_pred CCCCcCcEeEEEEECC----------------------------eeEEEEeccccCHHHHHhhccccccccccHHHHHHH
Confidence 9999999999988732 389999999999999886531 13446678899
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.||+.||.|||++|||||||||+|||++.+ +.+||+|||+++........ ......||+.|+|||++.+.
T Consensus 273 ~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~-----~~vkL~DFGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~ 343 (501)
T PHA03210 273 MKQLLCAVEYIHDKKLIHRDIKLENIFLNCD-----GKIVLGDFGTAMPFEKEREA----FDYGWVGTVATNSPEILAGD 343 (501)
T ss_pred HHHHHHHHHHHHhCCeecCCCCHHHEEECCC-----CCEEEEeCCCceecCccccc----ccccccCCcCCCCchhhcCC
Confidence 9999999999999999999999999999987 78999999999876542211 11245799999999999765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc-cc--c---------ccccccC----------------CC----
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR-NT--D---------YEVNALP----------------QL---- 473 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~-~~--~---------~~~~~~~----------------~~---- 473 (588)
. ++.++|||||||++|||++|..|+..... .. . ......+ ..
T Consensus 344 ~------~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~ 417 (501)
T PHA03210 344 G------YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSV 417 (501)
T ss_pred C------CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccch
Confidence 4 45789999999999999998754432110 00 0 0000000 00
Q ss_pred -----CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCC
Q psy4039 474 -----NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGAT 521 (588)
Q Consensus 474 -----~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~ 521 (588)
...++.++.+++.+||+.||.+|||+.|+++ ||||....
T Consensus 418 ~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~---------hp~f~~~~ 461 (501)
T PHA03210 418 PPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA---------LPLFSAEE 461 (501)
T ss_pred hhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh---------ChhhhcCC
Confidence 1135667888999999999999999999999 99997543
No 260
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.8e-37 Score=314.19 Aligned_cols=249 Identities=26% Similarity=0.286 Sum_probs=191.6
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||+|+||.||+|.+. +..||+|.+....... ......+|+.++.++ ..||||+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~----------------~~~~~~~e~~~l~~l---~~h~~i~ 61 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL----------------EQVNNLREIQALRRL---SPHPNIL 61 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc----------------hhhhHHHHHHHHhhc---CCCCCcc
Confidence 577889999999999999986 7899999985321110 111223577777666 4699999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++++.+.. +..+++||||++++|.+++......+++.++..++.|++.||.|
T Consensus 62 ~~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~ 115 (282)
T cd07831 62 RLIEVLFDRK--------------------------TGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDH 115 (282)
T ss_pred ceEEEEecCC--------------------------CCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 9999987631 12489999999999999998765579999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+.+|+||||||+||+++. +.+||+|||+++........ ....+|+.|+|||++..... .+.
T Consensus 116 LH~~~i~H~dl~p~ni~l~~------~~~kl~dfg~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~-----~~~ 178 (282)
T cd07831 116 MHRNGIFHRDIKPENILIKD------DILKLADFGSCRGIYSKPPY------TEYISTRWYRAPECLLTDGY-----YGP 178 (282)
T ss_pred HHHCCceecccCHHHEEEcC------CCeEEEecccccccccCCCc------CCCCCCcccCChhHhhcCCC-----CCc
Confidence 99999999999999999986 47999999999765432111 13457899999998754321 346
Q ss_pred cCchhhHHHHHHHHhcCCCCCccccccccc-----------------------ccccc--------CCCCCCccHHHHHH
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----------------------EVNAL--------PQLNTNVPEVMRRL 484 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----------------------~~~~~--------~~~~~~~~~~l~~L 484 (588)
++||||+||++|||++|..||.+......+ ..... ......++.++.++
T Consensus 179 ~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (282)
T cd07831 179 KMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDL 258 (282)
T ss_pred chhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHH
Confidence 899999999999999999999653110000 00000 01123568899999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 485 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 485 i~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
|.+||+.||++||+++++++ |||+
T Consensus 259 i~~~l~~~P~~R~~~~~~l~---------~~~~ 282 (282)
T cd07831 259 LKKLLAYDPDERITAKQALR---------HPYF 282 (282)
T ss_pred HHHHhccCcccccCHHHHhh---------CCCC
Confidence 99999999999999999999 9996
No 261
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.8e-38 Score=314.46 Aligned_cols=249 Identities=20% Similarity=0.291 Sum_probs=199.5
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
...+|++.+.||.|+||.||+|.+. +..+|+|.+..... .....+.+|+.+++.+ +||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-----------------~~~~~~~~e~~~l~~l----~~~ 62 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-----------------LKQQDFQKEVQALKRL----RHK 62 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-----------------hhHHHHHHHHHHHhcC----CCc
Confidence 3467999999999999999999987 68899999853211 0123456688888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~ 350 (588)
||+++++++.+.. ..+++|||+ +++|.+++... +..+++.++..++.|++
T Consensus 63 ~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~ 114 (261)
T cd05148 63 HLISLFAVCSVGE----------------------------PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVA 114 (261)
T ss_pred chhheeeeEecCC----------------------------CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 9999999887632 389999999 57999999864 34689999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++||+||||||+||+++.+ +.+||+|||++.......... ....++..|+|||++....
T Consensus 115 ~al~~lH~~~i~h~dl~~~nilv~~~-----~~~kl~d~g~~~~~~~~~~~~-----~~~~~~~~~~~PE~~~~~~---- 180 (261)
T cd05148 115 EGMAYLEEQNSIHRDLAARNILVGED-----LVCKVADFGLARLIKEDVYLS-----SDKKIPYKWTAPEAASHGT---- 180 (261)
T ss_pred HHHHHHHHCCeeccccCcceEEEcCC-----ceEEEccccchhhcCCccccc-----cCCCCceEecCHHHHccCC----
Confidence 99999999999999999999999987 789999999997764422111 1234677899999987654
Q ss_pred CCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++||||||+++|+|++ |+.||........+ .....++.+..+++.+.+++.+||+.||.+|||+.++++.|
T Consensus 181 --~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L 258 (261)
T cd05148 181 --FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL 258 (261)
T ss_pred --CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 4468999999999999998 89999664322111 12223345678899999999999999999999999999877
Q ss_pred h
Q psy4039 507 Q 507 (588)
Q Consensus 507 ~ 507 (588)
+
T Consensus 259 ~ 259 (261)
T cd05148 259 D 259 (261)
T ss_pred h
Confidence 6
No 262
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.3e-37 Score=321.19 Aligned_cols=258 Identities=24% Similarity=0.313 Sum_probs=200.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|... ++.||||.+........ ...+.+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l----~~~~ 62 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR--------------NKVKRVLTEQEILATL----DHPF 62 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH--------------HHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999986 68999999854321110 0123456788888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
|+++++.+.+. ...+++|||+ +++|.+++... ...+++..+..++.|+++
T Consensus 63 i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~ 114 (316)
T cd05574 63 LPTLYASFQTE----------------------------TYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLL 114 (316)
T ss_pred chhheeeeecC----------------------------CEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHH
Confidence 99999988653 2489999999 57999999764 347999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc------------------------ccccc
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ------------------------YSSAD 407 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~------------------------~~~~~ 407 (588)
||.|||+.|++||||||+||+++.+ +.++|+|||++.......... .....
T Consensus 115 ~l~~lH~~~i~H~dlkp~Nili~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (316)
T cd05574 115 ALEYLHLLGIVYRDLKPENILLHES-----GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRS 189 (316)
T ss_pred HHHHHHHCCeeccCCChHHeEEcCC-----CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCC
Confidence 9999999999999999999999987 789999999987653321100 00111
Q ss_pred ccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCC--CCCccHHHHH
Q psy4039 408 IELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQL--NTNVPEVMRR 483 (588)
Q Consensus 408 ~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~--~~~~~~~l~~ 483 (588)
....||..|+|||++.+.. .+.++|||||||++|+|++|..||.+......+.. ...... ...+++++++
T Consensus 190 ~~~~g~~~y~aPE~~~~~~------~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (316)
T cd05574 190 NSFVGTEEYIAPEVISGDG------HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARD 263 (316)
T ss_pred CCCcCccCCcCHHHHcCCC------CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHH
Confidence 2356899999999997654 45789999999999999999999976432221111 111112 2236899999
Q ss_pred HHHHhhhhCCCCCCC----HHHHHHHHhhhhhcCCccccC
Q psy4039 484 LVAKLLENDPSDRPS----AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 484 Li~~~L~~dP~~Rps----~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++.+||+.||++||| ++++++ |||++.
T Consensus 264 li~~~l~~~p~~R~s~~~~~~~ll~---------~~~~~~ 294 (316)
T cd05574 264 LIRKLLVKDPSKRLGSKRGAAEIKQ---------HPFFRG 294 (316)
T ss_pred HHHHHccCCHhHCCCchhhHHHHHc---------Cchhhc
Confidence 999999999999999 999888 999973
No 263
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.3e-37 Score=319.90 Aligned_cols=260 Identities=23% Similarity=0.335 Sum_probs=197.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. ++.||||.+....... ......+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~--------------~~~~~~~~~e~~~l~~~----~~~~ 62 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL--------------RNQIQQVFVERDILTFA----ENPF 62 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh--------------HHHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999987 6899999985321100 00123455788888876 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++.+... ..++++|||+ +++|.+++...+ .+++..+..++.|++.|
T Consensus 63 i~~~~~~~~~~----------------------------~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~ 113 (305)
T cd05609 63 VVSMFCSFETK----------------------------RHLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLA 113 (305)
T ss_pred eeeeEEEEecC----------------------------CEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 99999988753 1489999999 579999997764 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc----------cccccccccCCccccchhHH
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ----------YSSADIELGGNVALMAPEVA 422 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~----------~~~~~~~~~GT~~Y~APE~l 422 (588)
|.|||+++|+||||||+||+++.+ +.++|+|||+++......... .........|+..|+|||.+
T Consensus 114 l~~lH~~~i~H~dl~p~NIll~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 188 (305)
T cd05609 114 LEYLHNYGIVHRDLKPDNLLITSM-----GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVI 188 (305)
T ss_pred HHHHHHCCccccCCchHHEEECCC-----CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhc
Confidence 999999999999999999999887 789999999987421110000 00011134688999999998
Q ss_pred hcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc-----cccCCCCCCccHHHHHHHHHhhhhCCCCCC
Q psy4039 423 LATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV-----NALPQLNTNVPEVMRRLVAKLLENDPSDRP 497 (588)
Q Consensus 423 ~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~-----~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp 497 (588)
.+.. .+.++|||||||++|||++|..||.+......... ...+.....+|.++.++|.+||+.||++||
T Consensus 189 ~~~~------~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 262 (305)
T cd05609 189 LRQG------YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERL 262 (305)
T ss_pred cCCC------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhcc
Confidence 6544 45789999999999999999999976432211111 112222336789999999999999999999
Q ss_pred CHHHHHHHHhhhhhcCCccccC
Q psy4039 498 SAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 498 s~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++..+.++++ |||+..
T Consensus 263 ~~~~~~~ll~------~~~~~~ 278 (305)
T cd05609 263 GTGGAFEVKQ------HRFFLG 278 (305)
T ss_pred CccCHHHHHh------CccccC
Confidence 9555544455 999853
No 264
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.9e-37 Score=318.55 Aligned_cols=265 Identities=23% Similarity=0.246 Sum_probs=199.9
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++|.+.+.||+|+||.||+|.+. ++.||||.+....... .......+|+.+++.+ +||
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~h~ 67 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD---------------GFPITALREIKILKKL----KHP 67 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC---------------CcchhHHHHHHHHHhc----CCC
Confidence 489999999999999999999986 7899999985322111 0112345688999887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.+.... .......++++|||+.++|...+......+++..+..++.|+++|
T Consensus 68 ~i~~~~~~~~~~~~~--------------------~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~a 127 (311)
T cd07866 68 NVVPLIDMAVERPDK--------------------SKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEG 127 (311)
T ss_pred Cccchhhheeccccc--------------------ccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 999999987763210 011233589999999888988887655589999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc------ccccccccCCccccchhHHhcCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY------SSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
|.|||++||+||||||+||+++++ +.++|+|||+++.......... ........||+.|+|||++.+..
T Consensus 128 l~~lH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~ 202 (311)
T cd07866 128 INYLHENHILHRDIKAANILIDNQ-----GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGER 202 (311)
T ss_pred HHHHHhCCeecCCCCHHHEEECCC-----CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCC
Confidence 999999999999999999999987 8999999999986543221110 11112356789999999986542
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------c----cccCC-------CC
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------V----NALPQ-------LN 474 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------~----~~~~~-------~~ 474 (588)
. .+.++|||||||++|||++|++||.+........ . ..... ..
T Consensus 203 ~-----~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (311)
T cd07866 203 R-----YTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERF 277 (311)
T ss_pred c-----cCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHc
Confidence 1 3568999999999999999999986532110000 0 00000 01
Q ss_pred CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 475 TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 475 ~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
..+++++.+++.+||+.||.+|||+.+++. |||+
T Consensus 278 ~~~~~~~~~~i~~~l~~~p~~R~t~~ell~---------~~~f 311 (311)
T cd07866 278 GKLGPEGLDLLSKLLSLDPYKRLTASDALE---------HPYF 311 (311)
T ss_pred ccCChhHHHHHHHHcccCcccCcCHHHHhc---------CCCC
Confidence 234567899999999999999999999999 9996
No 265
>KOG4257|consensus
Probab=100.00 E-value=3.6e-38 Score=331.61 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=208.6
Q ss_pred CeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
...+.+.||.|-||.||+|++. .-.||||.++..... ...+.|..|..+|+.+ +
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~----------------d~tekflqEa~iMrnf----d 449 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP----------------DDTEKFLQEASIMRNF----D 449 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh----------------hhHHHHHHHHHHHHhC----C
Confidence 3455679999999999999986 236999998653322 2456677899999998 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
|||||+|+|+|.+.. .|+|||.+. |.|..||..+...|+......++.||
T Consensus 450 HphIikLIGv~~e~P-----------------------------~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi 500 (974)
T KOG4257|consen 450 HPHIIKLIGVCVEQP-----------------------------MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQI 500 (974)
T ss_pred Ccchhheeeeeeccc-----------------------------eeEEEecccchhHHHHHHhccccchHHHHHHHHHHH
Confidence 999999999998743 899999994 99999999887789999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||+|||+.+.|||||-.+|||+.+. ..+||+|||++|..........+ ...-.+.|||||.+.-..
T Consensus 501 ~talaYLeSkrfVHRDIAaRNiLVsSp-----~CVKLaDFGLSR~~ed~~yYkaS----~~kLPIKWmaPESINfRr--- 568 (974)
T KOG4257|consen 501 CTALAYLESKRFVHRDIAARNILVSSP-----QCVKLADFGLSRYLEDDAYYKAS----RGKLPIKWMAPESINFRR--- 568 (974)
T ss_pred HHHHHHHHhhchhhhhhhhhheeecCc-----ceeeecccchhhhccccchhhcc----ccccceeecCccccchhc---
Confidence 999999999999999999999999877 67999999999998764432221 223466899999986544
Q ss_pred cCCCCCcCchhhHHHHHHHHhc-CCCCCcccc---ccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSA---RNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~---~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
.++++|||.|||++||++. |..||.+-. ....++.+.+.+.|++||+.+..|+.+||+.||.+||++.++...
T Consensus 569 ---FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 569 ---FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred ---ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 5588999999999999986 899998732 233456677888999999999999999999999999999999887
Q ss_pred Hhhhh
Q psy4039 506 CQLYL 510 (588)
Q Consensus 506 L~~~~ 510 (588)
|...+
T Consensus 646 lsdv~ 650 (974)
T KOG4257|consen 646 LSDVL 650 (974)
T ss_pred HHHHH
Confidence 76544
No 266
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-37 Score=315.55 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=196.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||||.++.... .......+.+|+.+++.+ .|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~---------------~~~~~~~~~~e~~~l~~l----~~~~ 61 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED---------------DEDVKKTALREVKVLRQL----RHEN 61 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc---------------cccchhHHHHHHHHHHhc----CCCC
Confidence 46999999999999999999987 78999998843211 111234566799999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+.. ..+++|||+++++.+.+..+...+++.++..++.||+.||
T Consensus 62 i~~~~~~~~~~~----------------------------~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 62 IVNLKEAFRRKG----------------------------RLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred eeehhheEEECC----------------------------EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 999999987632 4899999997665555544444799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++|+||||||+||+++.+ +.+||+|||++.......... .....|+..|+|||++.+... .
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~-----~~~kl~d~g~~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~-----~ 179 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES-----GVLKLCDFGFARALRARPASP----LTDYVATRWYRAPELLVGDTN-----Y 179 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC-----CCEEEEeeecccccCCCcccc----ccCcccccCCcCCchhcCCCC-----c
Confidence 99999999999999999999987 899999999998765432211 124568899999999976521 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc------------------------cccccccC----------CCCCCccH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT------------------------DYEVNALP----------QLNTNVPE 479 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~------------------------~~~~~~~~----------~~~~~~~~ 479 (588)
+.++||||||+++|+|++|.+||.+..... .+.....+ ..+..+++
T Consensus 180 ~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T cd07833 180 GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSS 259 (288)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccch
Confidence 578999999999999999999986421100 00000000 12234588
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++.++|++||..||++|||+++++. |||+
T Consensus 260 ~~~~li~~~l~~~p~~Rps~~~il~---------~~~f 288 (288)
T cd07833 260 PALDFLKACLRMDPKERLTCDELLQ---------HPYF 288 (288)
T ss_pred HHHHHHHHHhccCchhcccHHHHhc---------CCCC
Confidence 9999999999999999999999999 9996
No 267
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.1e-37 Score=310.11 Aligned_cols=252 Identities=22% Similarity=0.287 Sum_probs=199.4
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
|++..++|++.+.||+|+||.||++.+. +..+|+|.+.... .....+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~------------------~~~~~~~~e~~~l~~l---- 58 (260)
T cd05073 1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS------------------MSVEAFLAEANVMKTL---- 58 (260)
T ss_pred CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh------------------hHHHHHHHHHHHHHhc----
Confidence 5667799999999999999999999875 5679999874211 0123466789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ 347 (588)
+|+||+++++++.+. ..+++|||+ +++|.+++... ...+++..+..++.
T Consensus 59 ~~~~i~~~~~~~~~~-----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 109 (260)
T cd05073 59 QHDKLVKLHAVVTKE-----------------------------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 109 (260)
T ss_pred CCCCcceEEEEEcCC-----------------------------CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHH
Confidence 899999999887641 279999999 57999999864 34689999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+.|++||||||+||+++.+ +.+||+|||++.......... .....++..|+|||++....
T Consensus 110 ~l~~aL~~lH~~~i~H~dl~p~ni~i~~~-----~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~- 179 (260)
T cd05073 110 QIAEGMAFIEQRNYIHRDLRAANILVSAS-----LVCKIADFGLARVIEDNEYTA----REGAKFPIKWTAPEAINFGS- 179 (260)
T ss_pred HHHHHHHHHHhCCccccccCcceEEEcCC-----CcEEECCCcceeeccCCCccc----ccCCcccccccCHhHhccCC-
Confidence 99999999999999999999999999887 899999999997654422111 11234567899999987544
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|++++ |..||........ .......+.+...+.++.+++.+||+.||++||++.+++
T Consensus 180 -----~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05073 180 -----FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 254 (260)
T ss_pred -----cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 4468999999999999998 8999976322111 111222234567889999999999999999999999999
Q ss_pred HHHhh
Q psy4039 504 TVCQL 508 (588)
Q Consensus 504 ~~L~~ 508 (588)
+.|+.
T Consensus 255 ~~L~~ 259 (260)
T cd05073 255 SVLDD 259 (260)
T ss_pred HHHhc
Confidence 87763
No 268
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.6e-37 Score=319.76 Aligned_cols=255 Identities=24% Similarity=0.297 Sum_probs=200.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|++.+.||+|+||.||+|.+. ++.||+|.+........ .....+.+|+.+++.+ +|||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~--------------~~~~~~~~Ei~~l~~l----~h~n 76 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN--------------EKWQDIIKEVRFLQQL----RHPN 76 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH--------------HHHHHHHHHHHHHHhC----CCCC
Confidence 66899999999999999999986 78999999853221111 0123456788899887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++++++|.+.. ..++||||+.|+|.+++......+++..+..++.|++.||
T Consensus 77 iv~~~~~~~~~~----------------------------~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L 128 (307)
T cd06607 77 TIEYKGCYLREH----------------------------TAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGL 128 (307)
T ss_pred EEEEEEEEEeCC----------------------------eEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHH
Confidence 999999988632 3899999999999888876555799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+|+||||+|+||+++++ +.++|+|||++...... ....|++.|+|||++.+... ...
T Consensus 129 ~~LH~~~i~H~dl~p~nIl~~~~-----~~~kL~dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~---~~~ 191 (307)
T cd06607 129 AYLHSHERIHRDIKAGNILLTEP-----GTVKLADFGSASLVSPA---------NSFVGTPYWMAPEVILAMDE---GQY 191 (307)
T ss_pred HHHHHCCceecCCCcccEEECCC-----CCEEEeecCcceecCCC---------CCccCCccccCceeeeccCC---CCC
Confidence 99999999999999999999987 78999999998654321 13468889999998753211 114
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCC-CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQL-NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~-~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++||||||+++|||++|..||.+....... .....+.. +..++.++++++.+||..||++||++.+++.
T Consensus 192 ~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~----- 266 (307)
T cd06607 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK----- 266 (307)
T ss_pred CcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc-----
Confidence 57899999999999999999999763211110 01111122 2346789999999999999999999999998
Q ss_pred hhcCCccccCCCC
Q psy4039 510 LWAPKHWLYGATP 522 (588)
Q Consensus 510 ~~~~h~w~~~~~~ 522 (588)
|||+....+
T Consensus 267 ----~~~~~~~~~ 275 (307)
T cd06607 267 ----HRFVLRERP 275 (307)
T ss_pred ----ChhhcccCC
Confidence 999986544
No 269
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.7e-37 Score=307.65 Aligned_cols=249 Identities=21% Similarity=0.231 Sum_probs=199.7
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|+..+.||.|+||.||.+... +..+|+|.+....... .....+.+|+.+++.+ +|+||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---------------~~~~~~~~e~~~l~~~----~h~~i 61 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE---------------KERRDALNEIVILSLL----QHPNI 61 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch---------------hHHHHHHHHHHHHHhC----CCCCe
Confidence 5889999999999998888775 7899999985322111 0223456789999887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. .++++|||+ +++|.+++... ...+++.++..++.|++.|
T Consensus 62 ~~~~~~~~~~~----------------------------~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (256)
T cd08221 62 IAYYNHFMDDN----------------------------TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSA 113 (256)
T ss_pred eEEEeEEecCC----------------------------eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 99999987632 489999999 57999999875 4468999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+++||||||+||+++.+ +.+||+|||++........ ......|++.|+|||++.+..
T Consensus 114 l~~lh~~~i~h~dl~p~ni~~~~~-----~~~kl~d~~~~~~~~~~~~-----~~~~~~~~~~y~ape~~~~~~------ 177 (256)
T cd08221 114 VSYIHKAGILHRDIKTLNIFLTKA-----GLIKLGDFGISKILGSEYS-----MAETVVGTPYYMSPELCQGVK------ 177 (256)
T ss_pred HHHHHhCCccccCCChHhEEEeCC-----CCEEECcCcceEEcccccc-----cccccCCCccccCHhhcCCCC------
Confidence 999999999999999999999987 7899999999987644221 112456899999999986543
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++||||||+++|||++|..||......... ........+..++.++.+++.+||..||++||+++++++
T Consensus 178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~----- 252 (256)
T cd08221 178 YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLD----- 252 (256)
T ss_pred CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhh-----
Confidence 346799999999999999999999764322211 112223344667899999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|+|+
T Consensus 253 ----~~~l 256 (256)
T cd08221 253 ----QPLL 256 (256)
T ss_pred ----CcCC
Confidence 8875
No 270
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.1e-37 Score=313.76 Aligned_cols=255 Identities=25% Similarity=0.321 Sum_probs=199.9
Q ss_pred cccCCeEEeeeecccCceeEEEEEECC-----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFRG-----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~g-----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
+..++|.+.+.||+|+||.||+|.+.. ..||||....... . ...+.+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~---~-------------~~~~~~~~e~~~l~~~-- 64 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS---P-------------SVREKFLQEAYIMRQF-- 64 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC---H-------------HHHHHHHHHHHHHHhC--
Confidence 344779999999999999999998752 3699998743211 0 0223456788888887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
.||||+++++++.+. ..+++|||+ +|+|.+++......+++..+..++
T Consensus 65 --~h~~i~~~~~~~~~~-----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ 113 (270)
T cd05056 65 --DHPHIVKLIGVITEN-----------------------------PVWIVMELAPLGELRSYLQVNKYSLDLASLILYS 113 (270)
T ss_pred --CCCchhceeEEEcCC-----------------------------CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 899999999987652 268999999 589999998765579999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||.|||+.+++||||||+|||++.+ +.++|+|||+++.......... ....+++.|+|||.+....
T Consensus 114 ~~l~~~l~~lH~~~~~H~dl~p~nili~~~-----~~~~l~d~g~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~ 184 (270)
T cd05056 114 YQLSTALAYLESKRFVHRDIAARNVLVSSP-----DCVKLGDFGLSRYLEDESYYKA----SKGKLPIKWMAPESINFRR 184 (270)
T ss_pred HHHHHHHHHHHhCCeeccccChheEEEecC-----CCeEEccCceeeecccccceec----CCCCccccccChhhhccCC
Confidence 999999999999999999999999999987 7899999999987544321111 1223567899999986554
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|||||||++||+++ |..||....... ..........+..+|.++.+++.+||..+|++|||+.++
T Consensus 185 ------~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~ 258 (270)
T cd05056 185 ------FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTEL 258 (270)
T ss_pred ------CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 4478999999999999986 999996643211 111223334567889999999999999999999999999
Q ss_pred HHHHhhhhh
Q psy4039 503 ATVCQLYLW 511 (588)
Q Consensus 503 l~~L~~~~~ 511 (588)
+..|+...+
T Consensus 259 ~~~l~~~~~ 267 (270)
T cd05056 259 KAQLSDILQ 267 (270)
T ss_pred HHHHHHHHh
Confidence 998776543
No 271
>KOG0612|consensus
Probab=100.00 E-value=7.3e-39 Score=356.48 Aligned_cols=259 Identities=24% Similarity=0.311 Sum_probs=210.8
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
...++|.+.++||+|+||.|..++++ ++.||+|++.+- .|.+. .....|.+|-.||..- +
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~-----------eMlKr---~~tA~F~EERDimv~~----n 133 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW-----------EMLKR---AETACFREERDIMVFG----N 133 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHH-----------HHhhc---hhHHHHHHHhHHHHcC----C
Confidence 34489999999999999999999997 789999998431 12211 2344677788898875 7
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
.+-||+++..|+|.. ++|+||||| ||+|..++.+-. .+++..++.++..|
T Consensus 134 s~Wiv~LhyAFQD~~----------------------------~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEi 184 (1317)
T KOG0612|consen 134 SEWIVQLHYAFQDER----------------------------YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEI 184 (1317)
T ss_pred cHHHHHHHHHhcCcc----------------------------ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHH
Confidence 899999999998843 599999999 799999999876 89999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+-||.-||+.|+|||||||+|||||.. |++||+|||.|-.......... ...+|||-|++||++....+.
T Consensus 185 VlAldslH~mgyVHRDiKPDNvLld~~-----GHikLADFGsClkm~~dG~V~s----~~aVGTPDYISPEvLqs~~~~- 254 (1317)
T KOG0612|consen 185 VLALDSLHSMGYVHRDIKPDNVLLDKS-----GHIKLADFGSCLKMDADGTVRS----SVAVGTPDYISPEVLQSQGDG- 254 (1317)
T ss_pred HHHHHHHHhccceeccCCcceeEeccc-----CcEeeccchhHHhcCCCCcEEe----ccccCCCCccCHHHHHhhcCC-
Confidence 999999999999999999999999998 9999999999987664333222 256899999999999866543
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccCCCC--CCccHHHHHHHHHhhhhCCCCCCC---HH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALPQLN--TNVPEVMRRLVAKLLENDPSDRPS---AE 500 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~~~~--~~~~~~l~~Li~~~L~~dP~~Rps---~~ 500 (588)
.+.|+..||+||+||++|||++|..||+.+.....|.. ...-.+| ..+|+++++||.+++. +|+.|.. ++
T Consensus 255 ~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngie 333 (1317)
T KOG0612|consen 255 KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIE 333 (1317)
T ss_pred ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHH
Confidence 34577889999999999999999999988633322211 1111233 4589999999999885 6899998 99
Q ss_pred HHHHHHhhhhhcCCcccc
Q psy4039 501 LAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 501 e~l~~L~~~~~~~h~w~~ 518 (588)
++.+ ||||.
T Consensus 334 dik~---------HpFF~ 342 (1317)
T KOG0612|consen 334 DIKN---------HPFFE 342 (1317)
T ss_pred HHHh---------Ccccc
Confidence 9888 88886
No 272
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2e-37 Score=315.73 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=196.1
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|++|.||+|++. +..||||.+....... ....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------~~~~~~~E~~~l~~l----~h~~i 60 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG----------------TPSTAIREISLMKEL----KHENI 60 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc----------------chHHHHHHHHHHHhh----cCCCE
Confidence 5889999999999999999996 8899999985422111 123345688999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC--AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~--~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.+.. ..++||||+.++|.+++.... ..+++..+..++.|++.|
T Consensus 61 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~ 112 (284)
T cd07836 61 VRLHDVIHTEN----------------------------KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKG 112 (284)
T ss_pred eeeeeeEeeCC----------------------------cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence 99999988632 389999999889999987653 468999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+||+++++ +.++|+|||+++....... ......+|+.|+|||++.+...
T Consensus 113 l~~lH~~~i~h~dl~p~ni~~~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~----- 177 (284)
T cd07836 113 IAFCHENRVLHRDLKPQNLLINKR-----GELKLADFGLARAFGIPVN-----TFSNEVVTLWYRAPDVLLGSRT----- 177 (284)
T ss_pred HHHHHHCCeeeCCCCHHHEEECCC-----CcEEEeecchhhhhcCCcc-----ccccccccccccChHHhcCCCC-----
Confidence 999999999999999999999987 7899999999976543211 1113457889999999865431
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc--------------------c---cc--------cCCCCCCccHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE--------------------V---NA--------LPQLNTNVPEVM 481 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~--------------------~---~~--------~~~~~~~~~~~l 481 (588)
++.++|||||||++|+|++|..||.+........ . .. ...+...++.++
T Consensus 178 ~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (284)
T cd07836 178 YSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLG 257 (284)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHH
Confidence 3568999999999999999999997532110000 0 00 001112457889
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++++.+||+.||.+||+++++++ |||+
T Consensus 258 ~~~i~~~l~~~p~~R~~~~~~l~---------~~~f 284 (284)
T cd07836 258 IDLLHRLLQLNPELRISAHDALQ---------HPWF 284 (284)
T ss_pred HHHHHHHhcCCcccCCCHHHHhc---------CCCC
Confidence 99999999999999999999998 9996
No 273
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.7e-37 Score=316.73 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=193.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. ++.||+|.+...... ....+.+.+|+.+++.+ +|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~h~~ 61 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD---------------KMVKKIAMREIRMLKQL----RHEN 61 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc---------------chhhHHHHHHHHHHHhc----CCcc
Confidence 47899999999999999999996 789999997421111 01223456789999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+. ++|..+.... ..+++.++..++.|+++|
T Consensus 62 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~ 112 (286)
T cd07846 62 LVNLIEVFRRKK----------------------------RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRG 112 (286)
T ss_pred hhhHHHhcccCC----------------------------eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHH
Confidence 999999986532 4899999995 5666655443 369999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+||||+|+||+++++ +.++|+|||++......... .....|+..|+|||++.+...
T Consensus 113 l~~LH~~~i~h~~l~p~ni~~~~~-----~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~----- 177 (286)
T cd07846 113 IEFCHSHNIIHRDIKPENILVSQS-----GVVKLCDFGFARTLAAPGEV-----YTDYVATRWYRAPELLVGDTK----- 177 (286)
T ss_pred HHHHHHCCccccCCCHHHEEECCC-----CcEEEEeeeeeeeccCCccc-----cCcccceeeccCcHHhccccc-----
Confidence 999999999999999999999987 78999999999775442211 113468899999999865331
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------ccccccC---------CCCCCccH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------YEVNALP---------QLNTNVPE 479 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~~~~~~~---------~~~~~~~~ 479 (588)
.+.++|||||||++|||++|++||........ ......+ .....++.
T Consensus 178 ~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (286)
T cd07846 178 YGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSG 257 (286)
T ss_pred cCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCH
Confidence 34679999999999999999999864221000 0000000 11246788
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.+.+++.+||+.||++||++.+++. |||+
T Consensus 258 ~~~~li~~~l~~~P~~Rp~~~~il~---------~~~~ 286 (286)
T cd07846 258 LVLDLAKQCLRIDPDDRPSSSQLLH---------HEFF 286 (286)
T ss_pred HHHHHHHHHhcCCcccchhHHHHhc---------CCCC
Confidence 9999999999999999999999998 9996
No 274
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-37 Score=319.20 Aligned_cols=253 Identities=21% Similarity=0.241 Sum_probs=193.6
Q ss_pred cccCCeEEeeeecccCceeEEEEEECC----------------eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhh
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFRG----------------VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRL 256 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~g----------------~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~ 256 (588)
+..++|++.+.||+|+||.||+|.+.+ ..||||.+..... . .....+.
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~-------------~~~~~~~ 65 (295)
T cd05097 2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT---K-------------TARNDFL 65 (295)
T ss_pred CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC---H-------------HHHHHHH
Confidence 344789999999999999999998642 3589999853210 0 0123466
Q ss_pred hHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-
Q psy4039 257 NEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC- 334 (588)
Q Consensus 257 ~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~- 334 (588)
+|+++++.+ +||||+++++++.... ..++||||+ +++|.+++....
T Consensus 66 ~ei~~l~~l----~h~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~ 113 (295)
T cd05097 66 KEIKIMSRL----KNPNIIRLLGVCVSDD----------------------------PLCMITEYMENGDLNQFLSQREI 113 (295)
T ss_pred HHHHHHHhC----CCCCcCeEEEEEcCCC----------------------------ccEEEEecCCCCcHHHHHHhccc
Confidence 799999987 9999999999987532 389999999 689999996532
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..+++..+..++.|++.||.|||+++++||||||+||+++.+ +.+||+|||+++........
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~-----~~~kl~dfg~~~~~~~~~~~--- 185 (295)
T cd05097 114 ESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH-----YTIKIADFGMSRNLYSGDYY--- 185 (295)
T ss_pred cccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC-----CcEEecccccccccccCcce---
Confidence 136889999999999999999999999999999999999977 78999999999765432111
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc--CCCCCccccccccc----------cccccCC
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG--HDNPFYQSARNTDY----------EVNALPQ 472 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt--G~~Pf~~~~~~~~~----------~~~~~~~ 472 (588)
.......+++.|+|||++.+.. .+.++|||||||++|||++ |..||......... .......
T Consensus 186 ~~~~~~~~~~~y~aPE~~~~~~------~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (295)
T cd05097 186 RIQGRAVLPIRWMAWESILLGK------FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLS 259 (295)
T ss_pred eccCcCcCceeecChhhhccCC------cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCC
Confidence 1111344678999999987654 4578999999999999988 66788652211100 0111123
Q ss_pred CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 473 LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 473 ~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+..+|+.+.+++.+||+.||++|||++++++.|+
T Consensus 260 ~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 260 QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 34567899999999999999999999999988664
No 275
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.5e-38 Score=318.95 Aligned_cols=249 Identities=21% Similarity=0.241 Sum_probs=198.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|+..+.||+|+||.||+|.+. +..||||.+...... ...+.+.+|+.+++.+ +|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 63 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE----------------DEIEDIQQEITVLSQC----DSPY 63 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch----------------HHHHHHHHHHHHHHcC----CCCc
Confidence 44667788999999999999886 789999998422110 0123466788888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+. ...++||||+ +++|.+++... .+++..+..++.|+++|
T Consensus 64 i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~ 113 (277)
T cd06642 64 ITRYYGSYLKG----------------------------TKLWIIMEYLGGGSALDLLKPG--PLEETYIATILREILKG 113 (277)
T ss_pred cHhhhcccccC----------------------------CceEEEEEccCCCcHHHHhhcC--CCCHHHHHHHHHHHHHH
Confidence 99999988652 1489999999 57999988654 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+|+||+|+||+++.+ +.++|+|||++........ ......|+..|+|||++.+..
T Consensus 114 l~~lH~~~ivH~dl~p~ni~i~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------ 177 (277)
T cd06642 114 LDYLHSERKIHRDIKAANVLLSEQ-----GDVKLADFGVAGQLTDTQI-----KRNTFVGTPFWMAPEVIKQSA------ 177 (277)
T ss_pred HHHHhcCCeeccCCChheEEEeCC-----CCEEEccccccccccCcch-----hhhcccCcccccCHHHhCcCC------
Confidence 999999999999999999999987 7899999999976543211 111346889999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|||++|..||........ ......+.+...++.++.+++.+||+.+|++||++.++++
T Consensus 178 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~----- 252 (277)
T cd06642 178 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK----- 252 (277)
T ss_pred CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH-----
Confidence 45689999999999999999999865322111 1112233445568889999999999999999999999999
Q ss_pred hhcCCccccC
Q psy4039 510 LWAPKHWLYG 519 (588)
Q Consensus 510 ~~~~h~w~~~ 519 (588)
|||+..
T Consensus 253 ----~~~~~~ 258 (277)
T cd06642 253 ----HKFITR 258 (277)
T ss_pred ----hHHHHH
Confidence 999863
No 276
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.1e-37 Score=308.73 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=196.3
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
...+|++.+.||+|+||.||+|.+. +..+|||.+..... ....+.+|+.+++.+ +||
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~------------------~~~~~~~e~~~l~~l----~~~ 59 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM------------------SEEDFIEEAQVMMKL----SHP 59 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC------------------CHHHHHHHHHHHHhC----CCC
Confidence 3478999999999999999999886 78999999843211 123456789999887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..+++|||+ +++|.+++......++++.+..++.|++.
T Consensus 60 ~i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 60 KLVQLYGVCTERS----------------------------PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred CeeeEEEEEccCC----------------------------ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 9999999887532 389999999 57999999876557899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+.+++||||||+||+++.+ +.++|+|||+++........ . .....++..|+|||++.+..
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~-----~~~~l~d~g~~~~~~~~~~~---~-~~~~~~~~~~~aPe~~~~~~----- 177 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN-----QVVKVSDFGMTRFVLDDQYT---S-STGTKFPVKWSSPEVFSFSK----- 177 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC-----CeEEECCCcceeecccCccc---c-cCCCccchhhcCHhHhccCC-----
Confidence 9999999999999999999999877 78999999998765432111 0 11233567899999987554
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++|||||||++|||++ |..||......... ........+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 178 -~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 178 -YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred -cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 4467999999999999998 99999753221111 11122233455789999999999999999999999998754
No 277
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.7e-37 Score=324.31 Aligned_cols=257 Identities=24% Similarity=0.278 Sum_probs=199.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||+||+|.+. +..||||.+....... .......+|+.+++.+ +|||
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h~n 65 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR---------------IDAKRTLREIKLLRHL----DHEN 65 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc---------------chhHHHHHHHHHHHhc----CCCC
Confidence 67999999999999999999986 7899999985321100 0122345688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.... ......+|++|||++++|.+++...+ .+++..+..++.|++.||
T Consensus 66 i~~~~~~~~~~~-----------------------~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL 121 (337)
T cd07858 66 VIAIKDIMPPPH-----------------------REAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGL 121 (337)
T ss_pred ccchHHheeccc-----------------------ccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHH
Confidence 999999887531 11112489999999999999987654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++++||||||+||+++.+ +.+||+|||+++....... ......||..|+|||.+..... .
T Consensus 122 ~~LH~~~i~H~dlkp~Nil~~~~-----~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~-----~ 186 (337)
T cd07858 122 KYIHSANVLHRDLKPSNLLLNAN-----CDLKICDFGLARTTSEKGD-----FMTEYVVTRWYRAPELLLNCSE-----Y 186 (337)
T ss_pred HHHHhCCEecCCCCHHHEEEcCC-----CCEEECcCccccccCCCcc-----cccccccccCccChHHHhcCCC-----C
Confidence 99999999999999999999987 7899999999986543211 1113457889999999865321 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc---------------ccc------------------ccccCCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------------DYE------------------VNALPQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------------~~~------------------~~~~~~~~~~~~~~ 480 (588)
+.++|||||||++|+|++|++||.+..... ... ..........++++
T Consensus 187 ~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd07858 187 TTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPL 266 (337)
T ss_pred CCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHH
Confidence 578999999999999999999996531100 000 00001123467889
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+.++|++||+.||++|||++++++ |||+..
T Consensus 267 ~~~li~~~l~~~P~~Rps~~ell~---------h~~~~~ 296 (337)
T cd07858 267 AIDLLEKMLVFDPSKRITVEEALA---------HPYLAS 296 (337)
T ss_pred HHHHHHHHhcCChhhccCHHHHHc---------Ccchhh
Confidence 999999999999999999999999 999973
No 278
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.5e-38 Score=315.44 Aligned_cols=249 Identities=24% Similarity=0.278 Sum_probs=200.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++.+. ++.||+|.+...... .....+.+|+.+++.+ .|||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------~~~~~~~~e~~~l~~~----~~~~ 60 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE----------------AIQKQILRELDILHKC----NSPY 60 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh----------------HHHHHHHHHHHHHHHC----CCCc
Confidence 46788899999999999999997 789999998542211 1223456788888887 7999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+. ...+++|||+. ++|.+++......+++..+..++.|+++|
T Consensus 61 i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~ 112 (265)
T cd06605 61 IVGFYGAFYNN----------------------------GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKG 112 (265)
T ss_pred hhhhheeeecC----------------------------CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 99999988763 24999999995 79999998764589999999999999999
Q ss_pred HHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 353 VTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 353 L~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
|.|||+ .+++||||||+||+++.+ +.++|+|||.+......... ...|+..|+|||++.+..
T Consensus 113 l~~lH~~~~i~H~dl~~~ni~~~~~-----~~~~l~d~g~~~~~~~~~~~-------~~~~~~~y~~PE~~~~~~----- 175 (265)
T cd06605 113 LTYLHEKHKIIHRDVKPSNILVNSR-----GQIKLCDFGVSGQLVNSLAK-------TFVGTSSYMAPERIQGND----- 175 (265)
T ss_pred HHHHcCCCCeecCCCCHHHEEECCC-----CCEEEeecccchhhHHHHhh-------cccCChhccCHHHHcCCC-----
Confidence 999999 999999999999999987 78999999998665322111 256888999999987654
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccc----c----cccccccCCCCCC-ccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARN----T----DYEVNALPQLNTN-VPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~----~----~~~~~~~~~~~~~-~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++||||||+++|+|++|..||...... . .......+.++.. ++++++++|.+||..||++|||+.++
T Consensus 176 -~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l 254 (265)
T cd06605 176 -YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKEL 254 (265)
T ss_pred -CCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 457899999999999999999999654110 0 0111222333333 78899999999999999999999999
Q ss_pred HHHHhhhhhcCCccccC
Q psy4039 503 ATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~~ 519 (588)
+. |||++.
T Consensus 255 l~---------~~~~~~ 262 (265)
T cd06605 255 LE---------HPFIKK 262 (265)
T ss_pred hh---------Cchhhc
Confidence 99 999964
No 279
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-37 Score=308.32 Aligned_cols=242 Identities=21% Similarity=0.287 Sum_probs=189.9
Q ss_pred eeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 202 KFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
++||+|+||.||+|... +..||+|.+..... . .....+.+|+.+++.+ +||||++++++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~---~-------------~~~~~~~~e~~~l~~l----~h~~i~~~~~~ 60 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP---Q-------------ELKIKFLSEARILKQY----DHPNIVKLIGV 60 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC---H-------------HHHHHHHHHHHHHHhC----CCCCcCeEEEE
Confidence 36999999999999876 67899999743110 0 0123456788888887 99999999999
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
+.+.. ..++||||+ +++|.+++......+++..+..++.|++.||.|||++
T Consensus 61 ~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 112 (250)
T cd05085 61 CTQRQ----------------------------PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK 112 (250)
T ss_pred EecCC----------------------------ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 87632 389999999 6899999987655789999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
|++||||||+||+++.+ +.+||+|||++.....+... ......+++.|+|||++.+.. .+.++||
T Consensus 113 ~~~H~dl~p~nili~~~-----~~~~l~d~g~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~------~~~~~Di 177 (250)
T cd05085 113 NCIHRDLAARNCLVGEN-----NVLKISDFGMSRQEDDGIYS----SSGLKQIPIKWTAPEALNYGR------YSSESDV 177 (250)
T ss_pred CeeecccChheEEEcCC-----CeEEECCCccceeccccccc----cCCCCCCcccccCHHHhccCC------CCchhHH
Confidence 99999999999999887 78999999999764432211 111234567899999986554 4578999
Q ss_pred hhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 440 WTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 440 wS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
|||||++||+++ |..||........ .........+..++.++.+++.+||+.+|++||++.++++.|
T Consensus 178 ~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 178 WSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 999999999998 9999976422111 111222344567899999999999999999999999998754
No 280
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.6e-37 Score=312.33 Aligned_cols=248 Identities=23% Similarity=0.325 Sum_probs=201.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|+||.||+|.+. +..||+|.+....... ....+.+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--------------~~~~~~~~~e~~~l~~l----~h~~i 62 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE--------------KGSVRNVLNERRILQEL----NHPFL 62 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc--------------hhHHHHHHHHHHHHHhC----CCCCh
Confidence 5889999999999999999997 8899999985321110 01234566788888887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+. ..+++||||+ +++|.+++... ..+++.++..++.|+++||
T Consensus 63 ~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l 113 (258)
T cd05578 63 VNLWYSFQDE----------------------------ENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLAL 113 (258)
T ss_pred HHHHHhhcCC----------------------------CeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHH
Confidence 9999887652 2499999999 67999999876 3899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++|+|+||||+||+++++ +.++|+|||.+........ .....|+..|+|||++.... .
T Consensus 114 ~~lh~~~i~h~dl~~~nil~~~~-----~~~~l~d~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~------~ 176 (258)
T cd05578 114 EYLHSKGIIHRDIKPDNILLDEQ-----GHVHITDFNIATKVTPDTL------TTSTSGTPGYMAPEVLCRQG------Y 176 (258)
T ss_pred HHHHhCCeeccCCCHHHeEEcCC-----CCEEEeecccccccCCCcc------ccccCCChhhcCHHHHcccC------C
Confidence 99999999999999999999987 7899999999876544221 11355888999999987654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccc--cccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH--HHHHHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSAR--NTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA--ELAATVC 506 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~--~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~--~e~l~~L 506 (588)
+.++|+||||+++|+|++|..||..... ...+ .....+..+..+|.++.++|.+||+.||.+||++ +++++
T Consensus 177 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~-- 254 (258)
T cd05578 177 SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKN-- 254 (258)
T ss_pred CCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhc--
Confidence 5789999999999999999999976432 1111 1113345667789999999999999999999999 89888
Q ss_pred hhhhhcCCccc
Q psy4039 507 QLYLWAPKHWL 517 (588)
Q Consensus 507 ~~~~~~~h~w~ 517 (588)
||||
T Consensus 255 -------~~~~ 258 (258)
T cd05578 255 -------HPYF 258 (258)
T ss_pred -------CCCC
Confidence 9996
No 281
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.5e-37 Score=316.43 Aligned_cols=252 Identities=25% Similarity=0.298 Sum_probs=195.7
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
..++|++.+.||+|+||.||+|.+. +..||+|++..... . .....+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~---~-------------~~~~~~~~ei~~l~~l- 65 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS---A-------------DMQADFQREAALMAEF- 65 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC---H-------------HHHHHHHHHHHHHHhc-
Confidence 4478999999999999999999874 57899999843210 0 0123466789999887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----------
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----------- 334 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----------- 334 (588)
.||||+++++++.+.. ..+++|||+ +|+|.+++....
T Consensus 66 ---~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 114 (288)
T cd05050 66 ---DHPNIVKLLGVCAVGK----------------------------PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHST 114 (288)
T ss_pred ---CCCchheEEEEEcCCC----------------------------ccEEEEecCCCCCHHHHHHHcCccccccccccc
Confidence 9999999999887632 379999999 579999997531
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..+++.+++.++.|++.||.|||+++++||||||+|||++.+ +.++|+|||+++.........
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~-- 187 (288)
T cd05050 115 SSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN-----MVVKIADFGLSRNIYSADYYK-- 187 (288)
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC-----CceEECccccceecccCcccc--
Confidence 247888999999999999999999999999999999999887 789999999987653321111
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHH
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEV 480 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~ 480 (588)
......+++.|+|||.+.+.. ++.++|||||||++|||++ |..||.+...... .........+..++.+
T Consensus 188 -~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T cd05050 188 -ASENDAIPIRWMPPESIFYNR------YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLE 260 (288)
T ss_pred -ccCCCccChhhcCHHHHhcCC------CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHH
Confidence 011233567899999987654 4578999999999999997 8889865322111 1112222345678899
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
+.+++.+||+.||++|||+.|+++.|+
T Consensus 261 l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 261 LYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 999999999999999999999998775
No 282
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.8e-37 Score=306.66 Aligned_cols=251 Identities=23% Similarity=0.284 Sum_probs=199.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|+..+.||+|+||.||+|... +..||+|.+........... ..+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~------------~~~~~~~e~~~l~~~----~h~~i 64 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQE------------AVKQLEQEIALLSKL----QHPNI 64 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchH------------HHHHHHHHHHHHHhc----CCCCc
Confidence 3677789999999999999986 78999999854322211111 123456688888887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. .++++|||+ +++|.+++.... .+++..+..++.|+++||
T Consensus 65 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l 115 (258)
T cd06632 65 VQYLGTEREED----------------------------NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGL 115 (258)
T ss_pred hheeeeEecCC----------------------------eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Confidence 99999887531 489999999 579999998764 689999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+|+||||+||+++.+ +.+||+|||++........ .....|++.|+|||.+.... . .
T Consensus 116 ~~lH~~~i~H~dl~~~ni~~~~~-----~~~kl~d~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~-~----~ 179 (258)
T cd06632 116 EYLHDRNTVHRDIKGANILVDTN-----GVVKLADFGMAKQVVEFSF------AKSFKGSPYWMAPEVIAQQG-G----Y 179 (258)
T ss_pred HHHHHCCcccCCCCHHHEEECCC-----CCEEEccCccceecccccc------ccccCCCcceeCHHHhcCCC-C----C
Confidence 99999999999999999999987 7999999999877544221 12456899999999986543 1 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++|+|||||++|+|++|..||........ ......+.++..+++++++++.+||+.+|++||++++++.
T Consensus 180 ~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~----- 254 (258)
T cd06632 180 GLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE----- 254 (258)
T ss_pred CchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc-----
Confidence 4679999999999999999999966421111 1112344566778999999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 255 ----~~~~ 258 (258)
T cd06632 255 ----HPFV 258 (258)
T ss_pred ----CCCC
Confidence 9996
No 283
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4e-37 Score=313.33 Aligned_cols=250 Identities=21% Similarity=0.255 Sum_probs=200.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|+..+.||.|+||.||+|.+. +..||||.+...... .....+.+|+.+++.+ .|||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 63 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE----------------DEIEDIQQEITVLSQC----DSPY 63 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH----------------HHHHHHHHHHHHHHhC----CCCC
Confidence 45777889999999999999986 789999998532110 0123456788888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+ +++|.+++... .+++.++..++.|++.|
T Consensus 64 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~ 113 (277)
T cd06640 64 VTKYYGSYLKGT----------------------------KLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKG 113 (277)
T ss_pred EeeEEEEEEECC----------------------------EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 999999987632 499999999 67999998754 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+++|+||+|+||+++.+ +.++|+|||++........ ......|+..|+|||++.+..
T Consensus 114 l~~lh~~~ivH~dl~p~Nil~~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~------ 177 (277)
T cd06640 114 LDYLHSEKKIHRDIKAANVLLSEQ-----GDVKLADFGVAGQLTDTQI-----KRNTFVGTPFWMAPEVIQQSA------ 177 (277)
T ss_pred HHHHHhCCccCcCCChhhEEEcCC-----CCEEEcccccceeccCCcc-----ccccccCcccccCHhHhccCC------
Confidence 999999999999999999999987 7899999999976543221 111346888999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|||++|..||......... .....+.++..++..+.+++.+||+.+|++||++++++.
T Consensus 178 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~----- 252 (277)
T cd06640 178 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK----- 252 (277)
T ss_pred CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHh-----
Confidence 457899999999999999999999764322111 112234455678889999999999999999999999999
Q ss_pred hhcCCccccCC
Q psy4039 510 LWAPKHWLYGA 520 (588)
Q Consensus 510 ~~~~h~w~~~~ 520 (588)
|+|+...
T Consensus 253 ----~~~~~~~ 259 (277)
T cd06640 253 ----HKFIVKN 259 (277)
T ss_pred ----ChHhhhc
Confidence 9998633
No 284
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.8e-37 Score=308.87 Aligned_cols=244 Identities=23% Similarity=0.273 Sum_probs=190.6
Q ss_pred eeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|+||.||+|.+. +..||+|.+...... ...+.+.+|+.+++.+ .|||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~iv~ 60 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA----------------AGKKEFLREASVMAQL----DHPCIVR 60 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch----------------HHHHHHHHHHHHHHhc----CCCCeee
Confidence 46999999999999875 268999998532211 0223456688888887 8999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
+++++... ..+++|||+ +|+|.+++.... .+++..+..++.|++.||.|
T Consensus 61 ~~~~~~~~-----------------------------~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 110 (257)
T cd05060 61 LIGVCKGE-----------------------------PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAY 110 (257)
T ss_pred EEEEEcCC-----------------------------ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHH
Confidence 99886532 279999999 579999998764 79999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+++++||||||+|||++.+ +.+||+|||+++......... .. .....++..|+|||.+.+.. .+.
T Consensus 111 lh~~~i~H~di~p~nili~~~-----~~~kl~df~~~~~~~~~~~~~-~~-~~~~~~~~~y~aPE~~~~~~------~~~ 177 (257)
T cd05060 111 LESKHFVHRDLAARNVLLVNR-----HQAKISDFGMSRALGAGSDYY-RA-TTAGRWPLKWYAPECINYGK------FSS 177 (257)
T ss_pred HhhcCeeccCcccceEEEcCC-----CcEEeccccccceeecCCccc-cc-ccCccccccccCHHHhcCCC------CCc
Confidence 999999999999999999987 789999999998764432211 11 11222456899999986554 457
Q ss_pred cCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 436 KSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 436 ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
++|||||||++|||++ |..||........ .........+..++..+++++.+||..||++||++.++++.|+.
T Consensus 178 ~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred cchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 8999999999999998 9999965322111 11122234556788999999999999999999999999997764
No 285
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3e-37 Score=317.58 Aligned_cols=264 Identities=24% Similarity=0.275 Sum_probs=200.4
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
..++|++.+.||+|+||.||+|.+. ++.||||.+....... .....+.+|+.+++.+ +|
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---------------~~~~~~~~e~~~~~~l----~h 65 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE---------------GFPITAIREIKILRQL----NH 65 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc---------------CchHHHHHHHHHHHhC----CC
Confidence 3488999999999999999999996 7899999985422110 0123345688888887 89
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
|||+++++++.+..... - -...+..++++|||++++|.+++......+++.++..++.|++.
T Consensus 66 ~~i~~~~~~~~~~~~~~-----~-------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~ 127 (302)
T cd07864 66 RNIVNLKEIVTDKQDAL-----D-------------FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLE 127 (302)
T ss_pred CCeeeeeheecCcchhh-----h-------------ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999987642100 0 00112359999999988888888765557999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||+.||+||||||+||+++++ +.+||+|||++..........+. ...++..|+|||.+.+...
T Consensus 128 aL~~LH~~~i~H~dl~p~nili~~~-----~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~---- 194 (302)
T cd07864 128 GLNYCHKKNFLHRDIKCSNILLNNK-----GQIKLADFGLARLYNSEESRPYT----NKVITLWYRPPELLLGEER---- 194 (302)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC-----CcEEeCcccccccccCCcccccc----cceeccCccChHHhcCCCC----
Confidence 9999999999999999999999987 89999999999876443221111 2346789999998864321
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccccccc----------ccccc----------------------CCCCCCccH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----------EVNAL----------------------PQLNTNVPE 479 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----------~~~~~----------------------~~~~~~~~~ 479 (588)
.+.++|||||||++|||++|++||......... ....+ ......+|.
T Consensus 195 -~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (302)
T cd07864 195 -YGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPT 273 (302)
T ss_pred -CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCH
Confidence 346899999999999999999999653110000 00000 011235689
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.+.+++.+||+.||.+||++++++. |||+
T Consensus 274 ~~~~li~~~l~~~P~~Rp~~~~il~---------~~~~ 302 (302)
T cd07864 274 PALDLLDHMLTLDPSKRCTAEEALN---------SPWL 302 (302)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc---------CCCC
Confidence 9999999999999999999999999 9996
No 286
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.5e-37 Score=312.50 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=189.6
Q ss_pred eecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 203 FIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
.||+|+||.||+|.+. ++.||||.+.......... ...+..|..+++.+ +...||||++++++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 65 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--------------ETLALNERIMLSLV-STGDCPFIVCMSYA 65 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh--------------HHHHHHHHHHHHHH-HhCCCCcEeeeeee
Confidence 4899999999999875 7899999986432221110 01122233333222 11379999999988
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
+.+.. ..++||||+ +++|.+++.... .+++..+..++.|+++||.|||+.
T Consensus 66 ~~~~~----------------------------~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~ 116 (278)
T cd05606 66 FHTPD----------------------------KLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNR 116 (278)
T ss_pred eecCC----------------------------EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 87632 489999999 689999887654 799999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
+|+||||||+||+++.+ +.++|+|||++........ ....||..|+|||++.+... ++.++||
T Consensus 117 ~i~H~di~p~nili~~~-----~~~kl~dfg~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~-----~~~~~Di 179 (278)
T cd05606 117 FVVYRDLKPANILLDEH-----GHVRISDLGLACDFSKKKP-------HASVGTHGYMAPEVLQKGVA-----YDSSADW 179 (278)
T ss_pred CEEcCCCCHHHEEECCC-----CCEEEccCcCccccCccCC-------cCcCCCcCCcCcHHhcCCCC-----CCcccch
Confidence 99999999999999987 7899999999875533211 13468999999999864321 4567999
Q ss_pred hhHHHHHHHHhcCCCCCcccccccc-----ccccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhhh
Q psy4039 440 WTAGTVAYEIFGHDNPFYQSARNTD-----YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQLY 509 (588)
Q Consensus 440 wS~Gvil~ElltG~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~~ 509 (588)
||+||++|||++|+.||........ ......+.++..++.++.+++.+||..||.+|| ++.++++
T Consensus 180 ~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~----- 254 (278)
T cd05606 180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE----- 254 (278)
T ss_pred HhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh-----
Confidence 9999999999999999976421111 111223455667899999999999999999999 9999988
Q ss_pred hhcCCccccCC
Q psy4039 510 LWAPKHWLYGA 520 (588)
Q Consensus 510 ~~~~h~w~~~~ 520 (588)
|||++..
T Consensus 255 ----~~~~~~~ 261 (278)
T cd05606 255 ----HPFFRSL 261 (278)
T ss_pred ----CccccCC
Confidence 9999753
No 287
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-37 Score=322.41 Aligned_cols=261 Identities=22% Similarity=0.262 Sum_probs=201.5
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHH
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNED 259 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei 259 (588)
..|++...+|++++.||+|+||.||+|.+. +..||+|.+.... .. .....+.+|+
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~---~~-------------~~~~~~~~E~ 68 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA---TD-------------KDLSDLVSEM 68 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc---CH-------------HHHHHHHHHH
Confidence 456777788999999999999999999863 2369999874211 00 0123455688
Q ss_pred HHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----
Q psy4039 260 MLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---- 334 (588)
Q Consensus 260 ~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---- 334 (588)
.+++++ .+||||++++++|.+.. .++++|||+ +|+|.+++....
T Consensus 69 ~~l~~l---~~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~ 117 (334)
T cd05100 69 EMMKMI---GKHKNIINLLGACTQDG----------------------------PLYVLVEYASKGNLREYLRARRPPGM 117 (334)
T ss_pred HHHHhh---cCCCCeeeeeEEEccCC----------------------------ceEEEEecCCCCcHHHHHHhcCCccc
Confidence 888776 47999999999987632 389999999 679999997531
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 335 -----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 335 -----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
..+++.++..++.|+++||.|||++||+||||||+|||++.+ +.+||+|||+++.........
T Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~-----~~~kL~Dfg~~~~~~~~~~~~- 191 (334)
T cd05100 118 DYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED-----NVMKIADFGLARDVHNIDYYK- 191 (334)
T ss_pred ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC-----CcEEECCcccceecccccccc-
Confidence 247889999999999999999999999999999999999887 789999999998754421111
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccH
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPE 479 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~ 479 (588)
......++..|+|||++.+.. ++.++|||||||++|||++ |..||.+....... .....+..+..++.
T Consensus 192 --~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (334)
T cd05100 192 --KTTNGRLPVKWMAPEALFDRV------YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTH 263 (334)
T ss_pred --cccCCCcCceEcCHHHhccCC------cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence 111233567899999987654 4578999999999999998 88998764222111 11223345567889
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
++.+++.+||+.+|++|||+.++++.|+...
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 264 ELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999887654
No 288
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.5e-37 Score=313.03 Aligned_cols=256 Identities=19% Similarity=0.223 Sum_probs=198.5
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+..++|++.+.||+|+||.||+|.+. +..||+|++.... +. .....+.+|+.+++.+
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~---~~-------------~~~~~~~~e~~~l~~l- 65 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA---SE-------------IQVTLLLQESCLLYGL- 65 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC---CH-------------HHHHHHHHHHHHHHhC-
Confidence 34488999999999999999999986 3789999874211 00 0123455688888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-------CCCC
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-------AQLS 338 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-------~~l~ 338 (588)
+||||+++++++.+.. ...++++||+ +++|.+++.... ..++
T Consensus 66 ---~h~ni~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 66 ---SHQNILPILHVCIEDG---------------------------EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred ---CCCCCCeEEEEEecCC---------------------------CCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 9999999999876521 1378999998 589999997642 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccc
Q psy4039 339 MHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMA 418 (588)
Q Consensus 339 ~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~A 418 (588)
+.+++.++.|++.||+|||+++++||||||+||+++++ +.+||+|||+++.......... .....++..|+|
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~-----~~~kl~d~g~~~~~~~~~~~~~---~~~~~~~~~y~a 187 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE-----LQVKITDNALSRDLFPMDYHCL---GDNENRPVKWMA 187 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC-----CcEEECCCCCcccccCCceEEe---CCCCCcchhccC
Confidence 99999999999999999999999999999999999987 7999999999986543211100 112346778999
Q ss_pred hhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCC
Q psy4039 419 PEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPS 494 (588)
Q Consensus 419 PE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~ 494 (588)
||++.+.. .+.++|||||||++||+++ |+.||......... ........+..+|+++.+++.+||..||+
T Consensus 188 pE~~~~~~------~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 261 (280)
T cd05043 188 LESLVNKE------YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPE 261 (280)
T ss_pred HHHHhcCC------CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence 99987654 4578999999999999998 99999763221111 11122234456789999999999999999
Q ss_pred CCCCHHHHHHHHhhh
Q psy4039 495 DRPSAELAATVCQLY 509 (588)
Q Consensus 495 ~Rps~~e~l~~L~~~ 509 (588)
+|||+.++++.|+.+
T Consensus 262 ~Rps~~~~~~~l~~~ 276 (280)
T cd05043 262 ERPSFSQLVQCLTDF 276 (280)
T ss_pred hCCCHHHHHHHHHHH
Confidence 999999999987754
No 289
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.9e-37 Score=312.22 Aligned_cols=256 Identities=21% Similarity=0.242 Sum_probs=200.5
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--C----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--G----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+..++|++.+.||+|+||+||+|.++ + ..||+|.+..... ......+.+|+.+++.+
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~----------------~~~~~~~~~e~~~l~~l- 66 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS----------------PKANKEILDEAYVMASV- 66 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC----------------HHHHHHHHHHHHHHHhC-
Confidence 34478999999999999999999975 2 3699998743211 01223456788898887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
+||||+++++++... ..+++|||+ +|+|.+++......+++..+..+
T Consensus 67 ---~h~~i~~~~~~~~~~-----------------------------~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 114 (279)
T cd05057 67 ---DHPHVVRLLGICLSS-----------------------------QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNW 114 (279)
T ss_pred ---CCCCcceEEEEEecC-----------------------------ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHH
Confidence 999999999988641 388999999 68999999886657999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.|++.||+|||+++|+||||||+|||++++ +.+||+|||+++........ .. .....++..|+|||.+...
T Consensus 115 ~~qi~~~l~~LH~~~i~H~di~p~nil~~~~-----~~~kL~dfg~~~~~~~~~~~-~~--~~~~~~~~~y~~PE~~~~~ 186 (279)
T cd05057 115 CVQIAKGMSYLEEKRLVHRDLAARNVLVKTP-----QHVKITDFGLAKLLDVDEKE-YH--AEGGKVPIKWMALESILHR 186 (279)
T ss_pred HHHHHHHHHHHHhCCEEecccCcceEEEcCC-----CeEEECCCcccccccCcccc-ee--cCCCcccccccCHHHhhcC
Confidence 9999999999999999999999999999877 78999999999876532211 11 0112246789999998654
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. .+.++|||||||++||+++ |..||....... ........+.+..++.++.+++.+||..||.+||++.+
T Consensus 187 ~------~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~ 260 (279)
T cd05057 187 I------YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKE 260 (279)
T ss_pred C------cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 4 4578999999999999998 999997642211 11122223445667889999999999999999999999
Q ss_pred HHHHHhhhhh
Q psy4039 502 AATVCQLYLW 511 (588)
Q Consensus 502 ~l~~L~~~~~ 511 (588)
+++.+..++-
T Consensus 261 l~~~l~~~~~ 270 (279)
T cd05057 261 LINEFSKMAR 270 (279)
T ss_pred HHHHHHHHHh
Confidence 9998876643
No 290
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.9e-37 Score=314.74 Aligned_cols=249 Identities=25% Similarity=0.315 Sum_probs=194.4
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||.|++|.||+|.+. |..||||++....... .....+.+|+.+++.+ +||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~~~~iv 61 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE---------------GVPSTAIREISLLKEL----NHPNIV 61 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc---------------cchhHHHHHHHHHHhc----CCCCcc
Confidence 567889999999999999986 8999999985322110 0123456689999887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+. ...+++|||++++|.+++.... ..+++..+..++.|+++||.
T Consensus 62 ~~~~~~~~~----------------------------~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~ 113 (283)
T cd07835 62 RLLDVVHSE----------------------------NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIA 113 (283)
T ss_pred CHhheeccC----------------------------CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999998763 1489999999889999997653 36899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+++++||||+|+||+++.+ +.++|+|||+++........ .....+++.|+|||++.+... ++
T Consensus 114 ~lH~~~~~H~dl~p~nil~~~~-----~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~-----~~ 178 (283)
T cd07835 114 YCHSHRVLHRDLKPQNLLIDRE-----GALKLADFGLARAFGVPVRT-----YTHEVVTLWYRAPEILLGSRQ-----YS 178 (283)
T ss_pred HHHHCCeeCCCCCHHHEEEcCC-----CcEEEeecccccccCCCccc-----cCccccccCCCCCceeecCcc-----cC
Confidence 9999999999999999999987 78999999999765432111 112356889999998765321 34
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccc------------------------c-------cccccCCCCCCccHHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------Y-------EVNALPQLNTNVPEVMRR 483 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------~-------~~~~~~~~~~~~~~~l~~ 483 (588)
.++|||||||++|||++|.+||........ + ...........++.++.+
T Consensus 179 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (283)
T cd07835 179 TPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLD 258 (283)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHH
Confidence 679999999999999999999965321000 0 000011123457789999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 484 LVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 484 Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++.+||+.||.+|||++++++ |||+
T Consensus 259 li~~~l~~~P~~Rpt~~~il~---------~~~~ 283 (283)
T cd07835 259 LLSKMLVYDPAKRISAKAALQ---------HPYF 283 (283)
T ss_pred HHHHHhcCChhhCcCHHHHhc---------CCCC
Confidence 999999999999999999999 9996
No 291
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-36 Score=310.46 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=197.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|+..+.||.|++|.||+|.+. ++.||+|.+...... .....+.+|+++++.+ +|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 60 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP----------------DLQKQILRELEINKSC----KSPY 60 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch----------------HHHHHHHHHHHHHHhC----CCCC
Confidence 47899999999999999999996 789999998532111 0223456788888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~ql 349 (588)
|++++++|.+.. ...+++||||+ +++|.+++.. ....+++..+..++.|+
T Consensus 61 iv~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i 114 (287)
T cd06621 61 IVKYYGAFLDES--------------------------SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESV 114 (287)
T ss_pred eeeeeeEEEccC--------------------------CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 999999987532 22489999999 5799988764 23468999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||.|||+.+++|+||+|+||+++.+ +.++|+|||++........ ....++..|+|||.+.+..
T Consensus 115 ~~~L~~lH~~~i~H~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~-------~~~~~~~~y~~pE~~~~~~--- 179 (287)
T cd06621 115 LKGLSYLHSRKIIHRDIKPSNILLTRK-----GQVKLCDFGVSGELVNSLA-------GTFTGTSFYMAPERIQGKP--- 179 (287)
T ss_pred HHHHHHHHHCCcccCCCCHHHEEEecC-----CeEEEeecccccccccccc-------ccccCCccccCHHHhcCCC---
Confidence 999999999999999999999999887 7899999999865433211 1345788999999987654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccc----ccc---cc-ccccCCCC------CCccHHHHHHHHHhhhhCCCC
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR----NTD---YE-VNALPQLN------TNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~----~~~---~~-~~~~~~~~------~~~~~~l~~Li~~~L~~dP~~ 495 (588)
++.++||||+||++|||++|..||..... ... .. ....+.++ ..+++.+.+++.+||+.||++
T Consensus 180 ---~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 256 (287)
T cd06621 180 ---YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTR 256 (287)
T ss_pred ---CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCccc
Confidence 45689999999999999999999976411 000 00 00111111 235678999999999999999
Q ss_pred CCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 496 RPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 496 Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
|||+.+++. |||++....
T Consensus 257 Rpt~~eil~---------~~~~~~~~~ 274 (287)
T cd06621 257 RPTPWDMLE---------HPWIKAQMK 274 (287)
T ss_pred CCCHHHHHh---------Ccccccccc
Confidence 999999999 999974433
No 292
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.5e-37 Score=315.54 Aligned_cols=252 Identities=20% Similarity=0.233 Sum_probs=193.0
Q ss_pred ccCCeEEeeeecccCceeEEEEEEC------------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchh
Q psy4039 194 KVDDIQIGKFIAKGTNAVVYEATFR------------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLR 255 (588)
Q Consensus 194 ~~~~~~~~~~IG~G~fG~Vy~a~~~------------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~ 255 (588)
..++|++.+.||+|+||.||++.+. +..||||++..... ......+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~----------------~~~~~~~ 66 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN----------------KNARNDF 66 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC----------------HHHHHHH
Confidence 3478999999999999999998643 34689999843110 0122356
Q ss_pred hhHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc
Q psy4039 256 LNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC 334 (588)
Q Consensus 256 ~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~ 334 (588)
.+|+.+++.+ +||||+++++++.+.. ..+++|||+ +++|.+++....
T Consensus 67 ~~E~~~l~~l----~~~~i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~ 114 (296)
T cd05095 67 LKEIKIMSRL----KDPNIIRLLAVCITSD----------------------------PLCMITEYMENGDLNQFLSRHE 114 (296)
T ss_pred HHHHHHHHhC----CCCCcceEEEEEecCC----------------------------ccEEEEEeCCCCcHHHHHHhcC
Confidence 6789999887 8999999999987632 389999999 589999997642
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..+++.++..++.|++.||.|||++||+||||||+|||++.+ +.++|+|||+++..........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~-----~~~~l~dfg~~~~~~~~~~~~~- 188 (296)
T cd05095 115 PQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN-----YTIKIADFGMSRNLYSGDYYRI- 188 (296)
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC-----CCEEeccCcccccccCCcceec-
Confidence 247788999999999999999999999999999999999877 7899999999976543221111
Q ss_pred cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc--CCCCCcccccccccc----------ccccCC
Q psy4039 405 SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG--HDNPFYQSARNTDYE----------VNALPQ 472 (588)
Q Consensus 405 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt--G~~Pf~~~~~~~~~~----------~~~~~~ 472 (588)
.....+++.|+|||+..+.. ++.++|||||||++|||++ |..||.......... .....+
T Consensus 189 --~~~~~~~~~~~~pe~~~~~~------~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (296)
T cd05095 189 --QGRAVLPIRWMSWESILLGK------FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLP 260 (296)
T ss_pred --cCcCcCccccCCHHHHhcCC------ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCC
Confidence 11234567899999886654 4578999999999999998 778886532111110 011122
Q ss_pred CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 473 LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 473 ~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+..+++.+.+++.+||+.||.+||+++++.+.|+
T Consensus 261 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 261 KPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 34568899999999999999999999999988765
No 293
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.9e-37 Score=312.75 Aligned_cols=254 Identities=20% Similarity=0.238 Sum_probs=196.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.-|++.+.||+|+||.||.|.+. +..||+|.++..... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~----------------~~~~~~~~e~~~l~~l---- 63 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG----------------NHIADLKKEIEILRNL---- 63 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH----------------HHHHHHHHHHHHHHhC----
Confidence 45788899999999999999853 778999998532110 0123456789999887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
.||||+++++++.+.. ....++||||+ +++|.+++......+++.++..++.|
T Consensus 64 ~h~~i~~~~~~~~~~~--------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~ 117 (284)
T cd05079 64 YHENIVKYKGICTEDG--------------------------GNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQ 117 (284)
T ss_pred CCCCeeeeeeEEecCC--------------------------CCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHH
Confidence 9999999999887631 11389999999 68999999776547899999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||.|||++||+||||||+||+++.+ +.++|+|||+++........ ........|+..|+|||++.+..
T Consensus 118 i~~aL~~lH~~gi~H~dlkp~Nil~~~~-----~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~-- 188 (284)
T cd05079 118 ICKGMDYLGSRQYVHRDLAARNVLVESE-----HQVKIGDFGLTKAIETDKEY--YTVKDDLDSPVFWYAPECLIQSK-- 188 (284)
T ss_pred HHHHHHHHHHCCeeecccchheEEEcCC-----CCEEECCCccccccccCccc--eeecCCCCCCccccCHHHhccCC--
Confidence 9999999999999999999999999887 78999999999876542221 11112356788899999986554
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc---------c---------ccccccCCCCCCccHHHHHHHHHhhh
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT---------D---------YEVNALPQLNTNVPEVMRRLVAKLLE 490 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---------~---------~~~~~~~~~~~~~~~~l~~Li~~~L~ 490 (588)
.+.++|||||||++|||+++..|+....... . .......+.+..++..+.+|+.+||+
T Consensus 189 ----~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (284)
T cd05079 189 ----FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWE 264 (284)
T ss_pred ----CCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHcc
Confidence 4578999999999999999877654321100 0 00112223456789999999999999
Q ss_pred hCCCCCCCHHHHHHHHhh
Q psy4039 491 NDPSDRPSAELAATVCQL 508 (588)
Q Consensus 491 ~dP~~Rps~~e~l~~L~~ 508 (588)
.||++|||++++++.++.
T Consensus 265 ~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 265 FQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred CCcccCcCHHHHHHHHHh
Confidence 999999999999987664
No 294
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.8e-37 Score=319.18 Aligned_cols=259 Identities=19% Similarity=0.221 Sum_probs=198.9
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--Ce----eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GV----EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~----~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+..++|+..+.||+|+||.||+|.+. +. .||+|.+..... . .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~---~-------------~~~~~~~~e~~~~~~l- 66 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG---P-------------KANVEFMDEALIMASM- 66 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC---H-------------HHHHHHHHHHHHHHhC-
Confidence 34478899999999999999999875 33 578898743111 0 0112355688888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
.||||+++++++... ..++++||+ +|+|.+++......+++..+..+
T Consensus 67 ---~h~niv~~~~~~~~~-----------------------------~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~ 114 (303)
T cd05110 67 ---DHPHLVRLLGVCLSP-----------------------------TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNW 114 (303)
T ss_pred ---CCCCcccEEEEEcCC-----------------------------CceeeehhcCCCCHHHHHHhcccCCCHHHHHHH
Confidence 999999999988642 156889999 58999999876557899999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++......... ......++..|+|||++.+.
T Consensus 115 ~~qi~~~L~~LH~~~ivH~dikp~Nill~~~-----~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~ 186 (303)
T cd05110 115 CVQIAKGMMYLEERRLVHRDLAARNVLVKSP-----NHVKITDFGLARLLEGDEKEY---NADGGKMPIKWMALECIHYR 186 (303)
T ss_pred HHHHHHHHHHHhhcCeeccccccceeeecCC-----CceEEccccccccccCccccc---ccCCCccccccCCHHHhccC
Confidence 9999999999999999999999999999877 789999999998764322111 11123467799999998765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. .+.++|||||||++|||++ |..||.+..... ..........+..++.++.+++.+||..||++||++++
T Consensus 187 ~------~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~ 260 (303)
T cd05110 187 K------FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKE 260 (303)
T ss_pred C------CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 4 4578999999999999997 899997632111 11112223344567889999999999999999999999
Q ss_pred HHHHHhhhhhcCC
Q psy4039 502 AATVCQLYLWAPK 514 (588)
Q Consensus 502 ~l~~L~~~~~~~h 514 (588)
+++.+......+.
T Consensus 261 l~~~l~~~~~~~~ 273 (303)
T cd05110 261 LAAEFSRMARDPQ 273 (303)
T ss_pred HHHHHHHHHhchh
Confidence 9998876654443
No 295
>KOG0579|consensus
Probab=100.00 E-value=8.8e-39 Score=335.95 Aligned_cols=277 Identities=22% Similarity=0.250 Sum_probs=209.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+-+.+...||.|+||.||+|..+ +...|-|+|.. .+. + .-+++.-||+||..+ .||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kse--E------------ELEDylVEIeILa~C----dHP~ 90 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSE--E------------ELEDYLVEIEILAEC----DHPV 90 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cch--h------------HHhhhhhhhhhhhcC----CChH
Confidence 44667788999999999999987 44567777732 111 1 234566799999998 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+|++.|.-.. .+|++.||| +|-++..+-.-+..|++.++..+++|++.|
T Consensus 91 ivkLl~ayy~en----------------------------kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldA 142 (1187)
T KOG0579|consen 91 IVKLLSAYYFEN----------------------------KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDA 142 (1187)
T ss_pred HHHHHHHHhccC----------------------------ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHH
Confidence 999998775421 499999999 577888877766699999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|||||||+.|||++.+ |.++|+|||.+........ ....+.|||+|||||+....... ...
T Consensus 143 Ln~LHs~~iIHRDLKAGNiL~Tld-----GdirLADFGVSAKn~~t~q-----kRDsFIGTPYWMAPEVvmCET~K-D~P 211 (1187)
T KOG0579|consen 143 LNWLHSQNIIHRDLKAGNILLTLD-----GDIRLADFGVSAKNKSTRQ-----KRDSFIGTPYWMAPEVVMCETFK-DQP 211 (1187)
T ss_pred HHHHhhcchhhhhccccceEEEec-----CcEeeecccccccchhHHh-----hhccccCCcccccchheeecccc-CCC
Confidence 999999999999999999999999 8999999998754332211 11257899999999998654321 112
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCC--CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQL--NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~--~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|..++||||||++|.||.-+.+|-..-...... .....|.+ |..++..+.|++.+||..||..||+++++++
T Consensus 212 YDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~--- 288 (1187)
T KOG0579|consen 212 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK--- 288 (1187)
T ss_pred chhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh---
Confidence 456899999999999999999997653222211 11222222 4567889999999999999999999999999
Q ss_pred hhhhcCCccccCCCCChhHHHHHHHhhhccccccC
Q psy4039 508 LYLWAPKHWLYGATPSHNEIMQWLLTLTTKVLCTG 542 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~~~~~~~~~l~~~~~~~~~~~ 542 (588)
|||++..... ..+...+......|..+.
T Consensus 289 ------Hpfv~~~~Sn-K~ireLlAEakAeV~EEv 316 (1187)
T KOG0579|consen 289 ------HPFVQNAPSN-KMIRELLAEAKAEVQEEV 316 (1187)
T ss_pred ------CcccccCCcc-hHHHHHHHHHHHHHHHHh
Confidence 9999754433 444555554545544443
No 296
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.4e-37 Score=307.09 Aligned_cols=243 Identities=24% Similarity=0.313 Sum_probs=194.7
Q ss_pred eeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|+||.||+|.+. +..||||.+....... ....+.+|+.++..+ +|+||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~----------------~~~~~~~e~~~l~~~----~~~~i~~ 60 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE----------------ERKDFLKEARVMKKL----GHPNVVR 60 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh----------------HHHHHHHHHHHHhhc----CCCChhe
Confidence 46999999999999997 7799999985322110 124456788888887 7999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh--------cCCCCHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER--------CAQLSMHERVLLFT 347 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~--------~~~l~~~~~~~i~~ 347 (588)
+++++.+.. ..+++|||+ +++|.+++... ...+++.+++.++.
T Consensus 61 ~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (262)
T cd00192 61 LLGVCTEEE----------------------------PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAI 112 (262)
T ss_pred eeeeecCCC----------------------------ceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHH
Confidence 999887621 489999999 78999999875 35899999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+||+++.+ +.+||+|||.+.......... ......+++.|+|||.+....
T Consensus 113 ~l~~al~~lH~~~i~H~di~p~nili~~~-----~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~- 183 (262)
T cd00192 113 QIAKGMEYLASKKFVHRDLAARNCLVGED-----LVVKISDFGLSRDVYDDDYYR---KKTGGKLPIRWMAPESLKDGI- 183 (262)
T ss_pred HHHHHHHHHHcCCcccCccCcceEEECCC-----CcEEEcccccccccccccccc---cccCCCcCccccCHHHhccCC-
Confidence 99999999999999999999999999988 799999999998765432111 112455788999999987653
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++||||+||++|||++ |..||........ .........+..+|+++.+++.+||..||++|||+++++
T Consensus 184 -----~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~ 258 (262)
T cd00192 184 -----FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELV 258 (262)
T ss_pred -----cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHH
Confidence 4578999999999999999 6999976422111 111223345677899999999999999999999999998
Q ss_pred HHH
Q psy4039 504 TVC 506 (588)
Q Consensus 504 ~~L 506 (588)
+.|
T Consensus 259 ~~l 261 (262)
T cd00192 259 ERL 261 (262)
T ss_pred Hhh
Confidence 854
No 297
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=9.9e-37 Score=308.90 Aligned_cols=249 Identities=20% Similarity=0.216 Sum_probs=184.8
Q ss_pred eeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 202 KFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
+.||+|+||.||+|.+. +..+|+|.++..... .....+.+|+.+++.+ +||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~E~~~l~~l----~h~~iv~~ 60 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV----------------QEQMKFLEEAQPYRSL----QHSNLLQC 60 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh----------------HHHHHHHHHHHHHHhC----CCCCEeeE
Confidence 36999999999999875 457999988532110 0112456688888887 99999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----~~l~~~~~~~i~~ql~~g 352 (588)
++++.+.. ..++||||+ +|+|.+++.... ..+++..+..++.|++.|
T Consensus 61 ~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~a 112 (269)
T cd05087 61 LGQCTEVT----------------------------PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALG 112 (269)
T ss_pred EEEEcCCC----------------------------CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHH
Confidence 99887632 379999999 589999997642 246777888999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc-cC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF-SF 431 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~-~~ 431 (588)
|.|||+.+++||||||+||+++.+ +.+||+|||+++........ .......|++.|+|||++.+..... ..
T Consensus 113 l~~lH~~~i~H~dlkp~nil~~~~-----~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 184 (269)
T cd05087 113 LLHLHKNNFIHSDLALRNCLLTAD-----LTVKIGDYGLSHNKYKEDYY---VTPDQLWVPLRWIAPELVDEVHGNLLVV 184 (269)
T ss_pred HHHHHHCCEeccccCcceEEEcCC-----CcEEECCccccccccCccee---ecCCCcCCcccccCHhHhcccccccccc
Confidence 999999999999999999999987 78999999999754332111 1111345788999999986532211 11
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCccccccccc--------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY--------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
..+.++|||||||++|||++ |..||......... .....+.+....++.+.+++.+|| .+|++|||++++
T Consensus 185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l 263 (269)
T cd05087 185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEV 263 (269)
T ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHH
Confidence 13578999999999999996 99999653211110 111122333457788999999999 689999999999
Q ss_pred HHHHh
Q psy4039 503 ATVCQ 507 (588)
Q Consensus 503 l~~L~ 507 (588)
...|+
T Consensus 264 ~~~l~ 268 (269)
T cd05087 264 HLLLS 268 (269)
T ss_pred HHHhc
Confidence 87654
No 298
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.3e-37 Score=310.03 Aligned_cols=240 Identities=19% Similarity=0.286 Sum_probs=188.8
Q ss_pred CCeEEeeee--cccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 196 DDIQIGKFI--AKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 196 ~~~~~~~~I--G~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
++|++.+.+ |+|+||.||++..+ +..+|+|.+...... ..|+.+...+ .+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----------------------~~e~~~~~~~---~~h 68 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----------------------AIEPMVHQLM---KDN 68 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----------------------hhhHHHHHHh---hcC
Confidence 456665555 99999999999986 788999998431100 0122222222 379
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||++++++|.+.. ..++||||+ +++|.+++.... .+++.++..++.|++
T Consensus 69 ~~iv~~~~~~~~~~----------------------------~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~ 119 (267)
T PHA03390 69 PNFIKLYYSVTTLK----------------------------GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLV 119 (267)
T ss_pred CCEEEEEEEEecCC----------------------------eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Confidence 99999999987632 499999999 689999998765 899999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCC-ceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCP-QLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~-~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+||.|||+.||+||||||+||+++.+ + .++|+|||+++...... ...||+.|+|||++.+..
T Consensus 120 ~~l~~lH~~~i~H~dl~p~nil~~~~-----~~~~~l~dfg~~~~~~~~~---------~~~~~~~y~aPE~~~~~~--- 182 (267)
T PHA03390 120 EALNDLHKHNIIHNDIKLENVLYDRA-----KDRIYLCDYGLCKIIGTPS---------CYDGTLDYFSPEKIKGHN--- 182 (267)
T ss_pred HHHHHHHhCCeeeCCCCHHHEEEeCC-----CCeEEEecCccceecCCCc---------cCCCCCcccChhhhcCCC---
Confidence 99999999999999999999999987 5 89999999987654321 245889999999997654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccc----cc--cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-HHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----DY--EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-AELA 502 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~----~~--~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-~~e~ 502 (588)
++.++|||||||++|||++|..||....... .. ........+..+++.+.++|.+||+.||.+||+ ++++
T Consensus 183 ---~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 259 (267)
T PHA03390 183 ---YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEI 259 (267)
T ss_pred ---CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHH
Confidence 4468999999999999999999997532111 01 111222344578999999999999999999996 6999
Q ss_pred HHHHhhhhhcCCcccc
Q psy4039 503 ATVCQLYLWAPKHWLY 518 (588)
Q Consensus 503 l~~L~~~~~~~h~w~~ 518 (588)
++ |||++
T Consensus 260 l~---------h~~~~ 266 (267)
T PHA03390 260 IK---------HPFLK 266 (267)
T ss_pred hc---------CCccc
Confidence 98 99985
No 299
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.9e-37 Score=307.19 Aligned_cols=250 Identities=24% Similarity=0.371 Sum_probs=198.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|.+.+.||+|+||.||+|.+. +..||+|.+...... ....+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---------------~~~~~~~~~E~~~l~~~----~h~~i 61 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP---------------VKEKEASKKEVILLAKM----KHPNI 61 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc---------------chhhHHHHHHHHHHHhC----CCCCh
Confidence 5889999999999999999996 789999998532111 01223456789999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~g 352 (588)
+++++.+.+.. ..++++||+ +++|.+++... ...+++..+..++.|+++|
T Consensus 62 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (257)
T cd08225 62 VTFFASFQENG----------------------------RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG 113 (257)
T ss_pred hhhhheeccCC----------------------------eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 99999876531 489999999 67999999764 3358999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.+|+|+||||+||+++++. ..+||+|||.+.......... ....|++.|+|||++....
T Consensus 114 l~~lh~~~i~H~dl~~~nil~~~~~----~~~~l~d~~~~~~~~~~~~~~-----~~~~~~~~~~ape~~~~~~------ 178 (257)
T cd08225 114 LKHIHDRKILHRDIKSQNIFLSKNG----MVAKLGDFGIARQLNDSMELA-----YTCVGTPYYLSPEICQNRP------ 178 (257)
T ss_pred HHHHHHCCcccccCCHHHEEEcCCC----CeEEecccccchhccCCcccc-----cccCCCccccCHHHHcCCC------
Confidence 9999999999999999999998762 357999999997754422111 1345899999999986543
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|||++|..||......... .....+.....++.+++++|.+||..+|++|||+.+++.
T Consensus 179 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~----- 253 (257)
T cd08225 179 YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK----- 253 (257)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh-----
Confidence 457899999999999999999999753221111 112233445677899999999999999999999999999
Q ss_pred hhcCCccc
Q psy4039 510 LWAPKHWL 517 (588)
Q Consensus 510 ~~~~h~w~ 517 (588)
|||+
T Consensus 254 ----~~~~ 257 (257)
T cd08225 254 ----RPFL 257 (257)
T ss_pred ----CCCC
Confidence 9996
No 300
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.2e-37 Score=323.61 Aligned_cols=261 Identities=22% Similarity=0.249 Sum_probs=198.5
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
.|++. ++|.+.+.||+|+||.||+|++. +..||||++...... ......+.+|+.+++.+
T Consensus 10 ~~~~~-~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~~~~e~~~l~~l-- 71 (342)
T cd07879 10 VWELP-ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS---------------EIFAKRAYRELTLLKHM-- 71 (342)
T ss_pred hhccc-cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc---------------ccchhHHHHHHHHHHhc--
Confidence 34443 78999999999999999999975 789999998431110 00123356788898887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+||||+++++++..... .......++||||+..+|..++. ..+++..+..++.
T Consensus 72 --~h~niv~~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~ 124 (342)
T cd07879 72 --QHENVIGLLDVFTSAVS----------------------GDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVY 124 (342)
T ss_pred --CCCCccchhheeccccc----------------------CCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHH
Confidence 99999999999875321 01122479999999878877652 2789999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.||.|||+++|+||||||+|||++.+ +.+||+|||+++...... ....||+.|+|||++.+...
T Consensus 125 qi~~aL~~LH~~~i~H~dlkp~NIll~~~-----~~~kL~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~ 191 (342)
T cd07879 125 QMLCGLKYIHSAGIIHRDLKPGNLAVNED-----CELKILDFGLARHADAEM--------TGYVVTRWYRAPEVILNWMH 191 (342)
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEECCC-----CCEEEeeCCCCcCCCCCC--------CCceeeecccChhhhcCccc
Confidence 99999999999999999999999999987 899999999987643211 13467889999999865321
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc-------------------------ccccC--------CCC
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-------------------------VNALP--------QLN 474 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-------------------------~~~~~--------~~~ 474 (588)
++.++|||||||++|||++|+.||.+......+. ....+ ...
T Consensus 192 -----~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (342)
T cd07879 192 -----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLF 266 (342)
T ss_pred -----cCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHh
Confidence 4568999999999999999999997632110000 00000 111
Q ss_pred CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 475 TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 475 ~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
..+++++.++|.+||+.||.+||++++++. |||+....+
T Consensus 267 ~~~~~~~~~li~~~l~~dP~~R~~~~e~l~---------h~~f~~~~~ 305 (342)
T cd07879 267 PKASPQAVDLLEKMLELDVDKRLTATEALE---------HPYFDSFRD 305 (342)
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhc---------Ccchhhccc
Confidence 346788999999999999999999999999 999985443
No 301
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=6.3e-37 Score=308.43 Aligned_cols=249 Identities=20% Similarity=0.247 Sum_probs=186.5
Q ss_pred eeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|+||.||+|.+. ...||||.+.... +. . ....+.+|+.+++.+ +||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~-~------------~~~~~~~e~~~l~~l----~h~~iv~ 60 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT---DL-E------------EVEQFLKEGIIMKDF----SHPNVLS 60 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC---CH-H------------HHHHHHHHHHHHccC----CCCCcce
Confidence 46899999999999874 3579999873211 00 0 123455688888776 9999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
+++++.... ...+++|||+ +|+|.+++......+++..+..++.|+++||.|
T Consensus 61 ~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 113 (262)
T cd05058 61 LLGICLPSE---------------------------GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEY 113 (262)
T ss_pred EEEEeecCC---------------------------CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999775421 1378999999 689999998765567888899999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+.+|+||||||+|||++.+ +.+||+|||+++........... ......+++.|+|||++.+.. .+.
T Consensus 114 lH~~~i~H~dlk~~nili~~~-----~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~------~~~ 181 (262)
T cd05058 114 LASKKFVHRDLAARNCMLDES-----FTVKVADFGLARDIYDKEYYSVH-NHTGAKLPVKWMALESLQTQK------FTT 181 (262)
T ss_pred HHhCCccccccCcceEEEcCC-----CcEEECCccccccccCCcceeec-ccccCcCCccccChhHhccCc------cch
Confidence 999999999999999999987 78999999999765432111100 111334677899999986554 457
Q ss_pred cCchhhHHHHHHHHhcC-CCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 436 KSDAWTAGTVAYEIFGH-DNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG-~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
++|||||||++|||++| .+||........ ......+..+..+|+.+.+++.+||+.+|++||++.++++.++..
T Consensus 182 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 182 KSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 89999999999999995 556654211111 111122334456789999999999999999999999999987744
No 302
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.9e-37 Score=310.63 Aligned_cols=255 Identities=26% Similarity=0.313 Sum_probs=194.8
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||+|+||.||+|.++ +..||||++........ ....+.+|+.+++.+.. ..||||+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~---------------~~~~~~~e~~~l~~l~~-~~h~~i~ 64 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG---------------IPLSTLREIALLKQLES-FEHPNIV 64 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccch---------------hhhhHHHHHHHHHHhhc-cCCCCcc
Confidence 678899999999999999997 78999999853221100 11233457777766522 2699999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+... ......+++||+++++|.+++.... ..+++..+..++.|+++||.
T Consensus 65 ~~~~~~~~~~~-----------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~ 121 (287)
T cd07838 65 RLLDVCHGPRT-----------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVD 121 (287)
T ss_pred eEEEEEeeccC-----------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHH
Confidence 99999887421 1122489999999889999987653 36999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+.+++|+||||+||+++.+ +.+||+|||++......... ....+++.|+|||++.+.. .+
T Consensus 122 ~LH~~~i~h~~l~~~nili~~~-----~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~------~~ 184 (287)
T cd07838 122 FLHSHRIVHRDLKPQNILVTSD-----GQVKIADFGLARIYSFEMAL------TSVVVTLWYRAPEVLLQSS------YA 184 (287)
T ss_pred HHHHCCeeeccCChhhEEEccC-----CCEEEeccCcceeccCCccc------ccccccccccChHHhccCC------CC
Confidence 9999999999999999999988 78999999999776442211 1345788999999997654 45
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------cccc--------CCCCCCccHHHHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------VNAL--------PQLNTNVPEVMRRLV 485 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------~~~~--------~~~~~~~~~~l~~Li 485 (588)
.++|||||||++|||++|.+||.......... .... ......+++.+.+++
T Consensus 185 ~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 264 (287)
T cd07838 185 TPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLL 264 (287)
T ss_pred CcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHH
Confidence 78999999999999999999987532110000 0000 001123567889999
Q ss_pred HHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 486 AKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
.+||+.||.+||++++++. |||+
T Consensus 265 ~~~l~~dp~~Rp~~~~il~---------~~~~ 287 (287)
T cd07838 265 KKMLTFNPHKRISAFEALQ---------HPYF 287 (287)
T ss_pred HHHhccCCccCCCHHHHhc---------CcCC
Confidence 9999999999999999998 9996
No 303
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.4e-37 Score=308.62 Aligned_cols=243 Identities=22% Similarity=0.340 Sum_probs=195.7
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||.|+||.||+|++. ++.||||.+........ ...+.+.+|+.+++.+ +||||+++++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l----~h~~i~~~~~~~ 62 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET--------------GQQEHIFSEKEILEEC----NHPFIVKLYRTF 62 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh--------------hHHHHHHHHHHHHHhC----CCCCEeeeeeeE
Confidence 799999999999998 88999999853221110 0123466788888887 899999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+.. .++++|||+ +++|.+++.... .+++..+..++.|+++||.|||+++
T Consensus 63 ~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~ 113 (262)
T cd05572 63 KDKK----------------------------YIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRG 113 (262)
T ss_pred EcCC----------------------------ccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 7632 389999999 689999998754 6899999999999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchh
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAW 440 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVw 440 (588)
++|+||||+||+++.+ +.++|+|||++....... ......|++.|+|||.+.... .+.++|+|
T Consensus 114 ~~h~dl~~~nilv~~~-----~~~~l~df~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~~~------~~~~~Di~ 176 (262)
T cd05572 114 IIYRDLKPENLLLDSN-----GYVKLVDFGFAKKLKSGQ------KTWTFCGTPEYVAPEIILNKG------YDFSVDYW 176 (262)
T ss_pred cccCCCCHHHEEEcCC-----CCEEEeeCCcccccCccc------ccccccCCcCccChhHhcCCC------CCChhhhh
Confidence 9999999999999987 789999999998765432 112356899999999986543 35689999
Q ss_pred hHHHHHHHHhcCCCCCccccc--cccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC-----HHHHHHHHhhh
Q psy4039 441 TAGTVAYEIFGHDNPFYQSAR--NTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-----AELAATVCQLY 509 (588)
Q Consensus 441 S~Gvil~ElltG~~Pf~~~~~--~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-----~~e~l~~L~~~ 509 (588)
|+|+++|+|++|..||..... ...+ .....+..+..+++++.++|.+||+.||++||+ ++++++
T Consensus 177 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~----- 251 (262)
T cd05572 177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK----- 251 (262)
T ss_pred hhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc-----
Confidence 999999999999999976541 1111 112334456667899999999999999999999 889888
Q ss_pred hhcCCccccC
Q psy4039 510 LWAPKHWLYG 519 (588)
Q Consensus 510 ~~~~h~w~~~ 519 (588)
|||++.
T Consensus 252 ----~~~~~~ 257 (262)
T cd05572 252 ----HKWFNG 257 (262)
T ss_pred ----ChhhhC
Confidence 999863
No 304
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7e-37 Score=311.57 Aligned_cols=252 Identities=21% Similarity=0.253 Sum_probs=200.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+-|++.+.||+|+||.||+|.+. +..||||.+...... .....+.+|+.++..+ +|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 63 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE----------------DEIEDIQQEITVLSQC----DSPY 63 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch----------------HHHHHHHHHHHHHHhc----CCCC
Confidence 34678889999999999999875 789999987421110 0123466788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..++||||+ +++|.+++... .+++..+..++.|++.|
T Consensus 64 iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~ 113 (277)
T cd06641 64 VTKYYGSYLKDT----------------------------KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKG 113 (277)
T ss_pred EeEEEEEEEeCC----------------------------eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 999999987632 489999999 57999998754 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|||+.|++|+||||+||+++.+ +.++|+|||++........ ......|+..|+|||.+.+..
T Consensus 114 l~~lh~~~i~h~dl~p~Ni~i~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~------ 177 (277)
T cd06641 114 LDYLHSEKKIHRDIKAANVLLSEH-----GEVKLADFGVAGQLTDTQI-----KRNTFVGTPFWMAPEVIKQSA------ 177 (277)
T ss_pred HHHHccCCeecCCCCHHhEEECCC-----CCEEEeecccceecccchh-----hhccccCCccccChhhhccCC------
Confidence 999999999999999999999877 7899999999876543211 111346888999999986543
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.+.++|||||||++|+|++|..||........ ......+.++..++.++.+++.+||+.+|.+||++.++++
T Consensus 178 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~----- 252 (277)
T cd06641 178 YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK----- 252 (277)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh-----
Confidence 34689999999999999999999975322111 1112234455678899999999999999999999999999
Q ss_pred hhcCCccccCCCC
Q psy4039 510 LWAPKHWLYGATP 522 (588)
Q Consensus 510 ~~~~h~w~~~~~~ 522 (588)
|||+.....
T Consensus 253 ----~~~~~~~~~ 261 (277)
T cd06641 253 ----HKFIVRFAK 261 (277)
T ss_pred ----CHHHhhhhh
Confidence 999985433
No 305
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.6e-36 Score=304.93 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=200.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|.+.+.||+|+||.||+|.+. +..||+|.+.......... .....+.+|+.+++.+ +|||
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~------------~~~~~~~~ei~~l~~l----~h~~ 65 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETS------------KEVNALECEIQLLKNL----RHDR 65 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhh------------HHHHHHHHHHHHHHHc----CCCC
Confidence 57999999999999999999986 7899999874322111110 1223466789999987 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ...++++|||+ +++|.+++.... .+++..+..++.|++.|
T Consensus 66 i~~~~~~~~~~~--------------------------~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~a 118 (264)
T cd06653 66 IVQYYGCLRDPE--------------------------EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQG 118 (264)
T ss_pred cceEEEEEEcCC--------------------------CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999886521 12488999999 579999998654 68999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+||+++.+ +.++|+|||+++......... .......|+..|+|||++.+..
T Consensus 119 l~~LH~~~i~H~dl~p~ni~i~~~-----~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~------ 185 (264)
T cd06653 119 VSYLHSNMIVHRDIKGANILRDSA-----GNVKLGDFGASKRIQTICMSG--TGIKSVTGTPYWMSPEVISGEG------ 185 (264)
T ss_pred HHHHHhCCEecCCCCHHHEEEcCC-----CCEEECccccccccccccccC--ccccccCCcccccCHhhhcCCC------
Confidence 999999999999999999999877 789999999998654311110 1112356899999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
.+.++|||||||++|||++|+.||......... .....+.++..+++.+++++.+||+ +|.+||++.++++
T Consensus 186 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~---- 260 (264)
T cd06653 186 YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR---- 260 (264)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc----
Confidence 346899999999999999999999764222111 1223345677889999999999999 5799999999988
Q ss_pred hhhcCCccc
Q psy4039 509 YLWAPKHWL 517 (588)
Q Consensus 509 ~~~~~h~w~ 517 (588)
|||.
T Consensus 261 -----~~~~ 264 (264)
T cd06653 261 -----HPFV 264 (264)
T ss_pred -----CCCC
Confidence 9884
No 306
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-37 Score=319.25 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=195.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|.....||+|+||.||++.+. +..||||.+.... . ...+.+.+|+.+++.+ +|||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-----~------------~~~~~~~~e~~~l~~l----~h~~ 80 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-----Q------------QRRELLFNEVVIMRDY----HHEN 80 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-----H------------HHHHHHHHHHHHHHhC----CCCc
Confidence 34455677999999999999885 7899999984211 0 0123456788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++.+... ...+++|||+ +++|.+++... .+++.++..++.|++.|
T Consensus 81 ii~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~ 130 (292)
T cd06658 81 VVDMYNSYLVG----------------------------DELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRA 130 (292)
T ss_pred HHHHHHheecC----------------------------CeEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHH
Confidence 99999887752 1489999999 57899888654 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.++|+|||++........ ......||+.|+|||++.+..
T Consensus 131 l~~LH~~~ivH~dlkp~Nill~~~-----~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------ 194 (292)
T cd06658 131 LSYLHNQGVIHRDIKSDSILLTSD-----GRIKLSDFGFCAQVSKEVP-----KRKSLVGTPYWMAPEVISRLP------ 194 (292)
T ss_pred HHHHHHCCEeecCCCHHHEEEcCC-----CCEEEccCcchhhcccccc-----cCceeecCccccCHHHHccCC------
Confidence 999999999999999999999987 7899999999876433211 112356899999999986554
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc---ccccC--CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNALP--QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~~~--~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|||++|..||.......... ....+ .....++..+++++.+||..||.+|||++++++
T Consensus 195 ~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~--- 271 (292)
T cd06658 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ--- 271 (292)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhh---
Confidence 4578999999999999999999997642211111 01111 122356888999999999999999999999999
Q ss_pred hhhhcCCccccCCC
Q psy4039 508 LYLWAPKHWLYGAT 521 (588)
Q Consensus 508 ~~~~~~h~w~~~~~ 521 (588)
|||+....
T Consensus 272 ------~~~~~~~~ 279 (292)
T cd06658 272 ------HPFLKLAG 279 (292)
T ss_pred ------ChhhhccC
Confidence 99998433
No 307
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.6e-37 Score=323.55 Aligned_cols=254 Identities=23% Similarity=0.271 Sum_probs=198.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..||||++.... .. ......+.+|+.+++.+ +|||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~------------~~~~~~~~~E~~~l~~l----~h~~ 75 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---QS------------ELFAKRAYRELRLLKHM----KHEN 75 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---cc------------hHHHHHHHHHHHHHHhc----CCCC
Confidence 78999999999999999999886 7899999984311 00 00123455789999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++..... .......++|||+++++|.+++... .+++..+..++.|+++||
T Consensus 76 iv~~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~qi~~al 131 (343)
T cd07880 76 VIGLLDVFTPDLS----------------------LDRFHDFYLVMPFMGTDLGKLMKHE--KLSEDRIQFLVYQMLKGL 131 (343)
T ss_pred ccceeeeecCCcc----------------------ccccceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 9999999875321 1112247999999988999888754 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||+++.+ +.++|+|||++....... ....+++.|+|||++.+... .
T Consensus 132 ~~LH~~gi~H~dlkp~Nill~~~-----~~~kl~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~-----~ 193 (343)
T cd07880 132 KYIHAAGIIHRDLKPGNLAVNED-----CELKILDFGLARQTDSEM--------TGYVVTRWYRAPEVILNWMH-----Y 193 (343)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-----CCEEEeecccccccccCc--------cccccCCcccCHHHHhCCCC-----C
Confidence 99999999999999999999977 789999999997653321 13457899999999865321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------------------ccccCCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------------------VNALPQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~ 480 (588)
+.++||||+||++|+|++|..||.......... ..........++++
T Consensus 194 ~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (343)
T cd07880 194 TQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPL 273 (343)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChH
Confidence 467999999999999999999997531100000 00001123467888
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+.++|.+||+.||.+|||+.+++. |||++.
T Consensus 274 ~~~li~~~l~~dP~~R~t~~~~l~---------~~~~~~ 303 (343)
T cd07880 274 AVNVLEKMLVLDAESRITAAEALA---------HPYFEE 303 (343)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc---------CccHhh
Confidence 999999999999999999999998 999983
No 308
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9e-37 Score=319.56 Aligned_cols=259 Identities=22% Similarity=0.257 Sum_probs=196.0
Q ss_pred CeEEeeeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+|++.+.||+|+||.||++.+. +..||||.+...... ....+.+.+|+.+++.+ ..||
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~---------------~~~~~~~~~E~~~l~~l---~~h~ 62 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK---------------KILAKRALRELKLLRHF---RGHK 62 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc---------------chhHHHHHHHHHHHHHh---cCCC
Confidence 4788999999999999999987 558999998531100 00123445688888876 4699
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++.+.... .....+|++||+++++|.+++.... .+++..+..++.||+.|
T Consensus 63 ~iv~~~~~~~~~~------------------------~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~a 117 (332)
T cd07857 63 NITCLYDMDIVFP------------------------GNFNELYLYEELMEADLHQIIRSGQ-PLTDAHFQSFIYQILCG 117 (332)
T ss_pred Chheeeeeeeecc------------------------ccCCcEEEEEecccCCHHHHHhcCC-CCCHHHHHHHHHHHHHH
Confidence 9999998754311 1112488999999999999997654 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||+|||++.+ +.+||+|||+++......... ........||+.|+|||++.+...
T Consensus 118 L~~LH~~givH~dlkp~Nili~~~-----~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~----- 186 (332)
T cd07857 118 LKYIHSANVLHRDLKPGNLLVNAD-----CELKICDFGLARGFSENPGEN-AGFMTEYVATRWYRAPEIMLSFQS----- 186 (332)
T ss_pred HHHHHhCCcccCCCCHHHeEEcCC-----CCEEeCcCCCceecccccccc-cccccCcccCccccCcHHHhCCCC-----
Confidence 999999999999999999999987 789999999998755422111 111224578999999998865321
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccc---------------------------------ccccccCCCCCCccH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---------------------------------YEVNALPQLNTNVPE 479 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---------------------------------~~~~~~~~~~~~~~~ 479 (588)
.+.++||||+||++|+|++|.+||........ ............++.
T Consensus 187 ~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (332)
T cd07857 187 YTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANP 266 (332)
T ss_pred CCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCH
Confidence 45689999999999999999999865211000 000001112234678
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.+.+++.+||+.||.+|||+++++. |||++
T Consensus 267 ~~~~li~~~l~~~P~~R~t~~~ll~---------~~~~~ 296 (332)
T cd07857 267 LALDLLEKLLAFDPTKRISVEEALE---------HPYLA 296 (332)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc---------Chhhh
Confidence 8999999999999999999999988 99986
No 309
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.6e-37 Score=310.13 Aligned_cols=245 Identities=22% Similarity=0.257 Sum_probs=187.8
Q ss_pred eeecccCceeEEEEEEC--C--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 202 KFIAKGTNAVVYEATFR--G--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
+.||+|+||.||+|.+. + ..+|+|.+...... ...+.+.+|+.++.++ ..||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~E~~~l~~l---~~h~~iv~~ 61 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK----------------DDHRDFAGELEVLCKL---GHHPNIINL 61 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH----------------HHHHHHHHHHHHHHhh---ccCCCeeeE
Confidence 36999999999999986 2 35788887421100 0123455688888776 579999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc---------------CCCCHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---------------AQLSMHE 341 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---------------~~l~~~~ 341 (588)
++++.... ..+++|||+ +|+|.+++.... ..+++.+
T Consensus 62 ~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (270)
T cd05047 62 LGACEHRG----------------------------YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 113 (270)
T ss_pred EEEEecCC----------------------------CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHH
Confidence 99987632 389999999 689999997642 2478999
Q ss_pred HHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhH
Q psy4039 342 RVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 421 (588)
Q Consensus 342 ~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 421 (588)
+..++.|++.||+|||++|++||||||+|||++.+ +.+||+|||+++...... .......+..|+|||+
T Consensus 114 ~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~-----~~~kl~dfgl~~~~~~~~------~~~~~~~~~~y~apE~ 182 (270)
T cd05047 114 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN-----YVAKIADFGLSRGQEVYV------KKTMGRLPVRWMAIES 182 (270)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC-----CeEEECCCCCccccchhh------hccCCCCccccCChHH
Confidence 99999999999999999999999999999999987 789999999986432211 0111234667999999
Q ss_pred HhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCC
Q psy4039 422 ALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRP 497 (588)
Q Consensus 422 l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp 497 (588)
+.... ++.++|||||||++|||++ |..||.+....... ........+..++.++.+++.+||+.||.+||
T Consensus 183 ~~~~~------~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 256 (270)
T cd05047 183 LNYSV------YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 256 (270)
T ss_pred HccCC------CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCC
Confidence 86554 4578999999999999997 99999654221111 11122234556789999999999999999999
Q ss_pred CHHHHHHHHhhhh
Q psy4039 498 SAELAATVCQLYL 510 (588)
Q Consensus 498 s~~e~l~~L~~~~ 510 (588)
|++++++.|..++
T Consensus 257 s~~~il~~l~~~~ 269 (270)
T cd05047 257 SFAQILVSLNRML 269 (270)
T ss_pred CHHHHHHHHHHhh
Confidence 9999999887554
No 310
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9e-37 Score=309.00 Aligned_cols=249 Identities=19% Similarity=0.193 Sum_probs=183.3
Q ss_pred eeecccCceeEEEEEEC----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 202 KFIAKGTNAVVYEATFR----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
+.||+|+||.||+|... ...+|+|.+.... .. .....+.+|+.+++.+ +||||+++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~---~~-------------~~~~~~~~e~~~~~~l----~h~nii~~ 60 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA---TP-------------DEQLLFLQEVQPYREL----NHPNVLQC 60 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC---Ch-------------HHHHHHHHHHHHHHhC----CCCCcceE
Confidence 36999999999999764 3578888764211 10 0123456688888876 99999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc----CCCCHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----~~l~~~~~~~i~~ql~~g 352 (588)
++.+.+.. ..++||||+ +|+|.+++.... ...++..+..++.||+.|
T Consensus 61 ~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~ 112 (269)
T cd05042 61 LGQCIESI----------------------------PYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASG 112 (269)
T ss_pred EEEECCCC----------------------------ceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHH
Confidence 99887632 389999999 589999998642 235678889999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC-ccC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL-FSF 431 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~ 431 (588)
|+|||+++|+||||||+|||++.+ +.+||+|||+++......... ......+++.|+|||++...... ...
T Consensus 113 l~~lH~~~ivH~dlkp~Nill~~~-----~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~ 184 (269)
T cd05042 113 LLWLHQADFIHSDLALRNCQLTAD-----LSVKIGDYGLALEQYPEDYYI---TKDCHAVPLRWLAPELVEIRGQDLLPK 184 (269)
T ss_pred HHHHHhcCEecccccHhheEecCC-----CcEEEeccccccccccchhee---ccCCCCCcccccCHHHHhhcccccccc
Confidence 999999999999999999999987 789999999987543321110 01134467789999998653211 111
Q ss_pred CCCCcCchhhHHHHHHHHhc-CCCCCcccccccc--------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD--------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~--------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
..+.++|||||||++|||++ |..||........ ......+..+..+++.+.+++..|| .||++|||++++
T Consensus 185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v 263 (269)
T cd05042 185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEV 263 (269)
T ss_pred ccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHH
Confidence 24568999999999999999 7888865321110 0011123345578889999999999 599999999999
Q ss_pred HHHHh
Q psy4039 503 ATVCQ 507 (588)
Q Consensus 503 l~~L~ 507 (588)
++.+.
T Consensus 264 ~~~l~ 268 (269)
T cd05042 264 HELLT 268 (269)
T ss_pred HHHhc
Confidence 88654
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=9.2e-37 Score=313.90 Aligned_cols=251 Identities=26% Similarity=0.338 Sum_probs=200.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||++... +..||+|.+...... ..+.+.+|+.+++.+ +|||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-----------------~~~~~~~e~~~l~~l----~hp~ 77 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP-----------------KKELIINEILVMREN----KHPN 77 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch-----------------HHHHHHHHHHHHhhc----CCCC
Confidence 78999999999999999999875 788999998421100 123456688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..|+|+||+ +++|.+++... .+++.++..++.|++.|
T Consensus 78 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~a 127 (293)
T cd06647 78 IVNYLDSYLVGD----------------------------ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQA 127 (293)
T ss_pred eeehhheeeeCC----------------------------cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHH
Confidence 999999887632 389999999 68999999765 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++|++||||||+||+++.+ +.++|+|||++........ ......|++.|+|||.+....
T Consensus 128 l~~LH~~gi~H~dL~p~Nili~~~-----~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~------ 191 (293)
T cd06647 128 LEFLHSNQVIHRDIKSDNILLGMD-----GSVKLTDFGFCAQITPEQS-----KRSTMVGTPYWMAPEVVTRKA------ 191 (293)
T ss_pred HHHHHhCCEeeccCCHHHEEEcCC-----CCEEEccCcceeccccccc-----ccccccCChhhcCchhhccCC------
Confidence 999999999999999999999887 7899999999876543211 111346889999999986653
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccccc---cccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV---NALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~---~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|++++|+.||........... ...+. .+..++..+++++.+||..+|++||++++++.
T Consensus 192 ~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--- 268 (293)
T cd06647 192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ--- 268 (293)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc---
Confidence 45689999999999999999999976432211111 11111 23456788999999999999999999999999
Q ss_pred hhhhcCCccccCCCC
Q psy4039 508 LYLWAPKHWLYGATP 522 (588)
Q Consensus 508 ~~~~~~h~w~~~~~~ 522 (588)
|+|++...+
T Consensus 269 ------h~~~~~~~~ 277 (293)
T cd06647 269 ------HPFLKIAKP 277 (293)
T ss_pred ------CHHHhcCcc
Confidence 999985553
No 312
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.8e-37 Score=322.88 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=199.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|+||.||+|.+. +..||||.+..... +. .....+.+|+.+++.+ .+|||
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~-------------~~~~~~~~E~~~l~~l---~~h~n 68 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--NA-------------TDAQRTFREIMFLQEL---GDHPN 68 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--cc-------------hhhhhhhHHHHHHHHh---cCCCC
Confidence 78999999999999999999986 78999999843110 00 0122345688888876 48999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++++++|.... ....++||||++++|..++... .+++..+..++.||+.||
T Consensus 69 i~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L 120 (337)
T cd07852 69 IVKLLNVIKAEN--------------------------DKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKAL 120 (337)
T ss_pred ccceeeeeccCC--------------------------CceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 999999876521 1248999999999999998765 789999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||+++.+ +.+||+|||+++..................||+.|+|||++.+... .
T Consensus 121 ~~LH~~~i~H~dl~p~nill~~~-----~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-----~ 190 (337)
T cd07852 121 KYIHSGNVIHRDLKPSNILLNSD-----CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTR-----Y 190 (337)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC-----CcEEEeeccchhccccccccccCcchhcccccccccCceeeecccc-----c
Confidence 99999999999999999999988 8999999999987644322111112224568999999998765321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc------------------------------c---cccccCCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------------------Y---EVNALPQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------------------~---~~~~~~~~~~~~~~~ 480 (588)
+.++|||||||++|||++|+.||.+...... . ...........++.+
T Consensus 191 ~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (337)
T cd07852 191 TKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDD 270 (337)
T ss_pred cccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHH
Confidence 4679999999999999999999964211000 0 000001112347889
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+.++|.+||+.||++|||+.++++ |||++.
T Consensus 271 l~~li~~~l~~~P~~Rps~~~il~---------~~~~~~ 300 (337)
T cd07852 271 ALDLLKKLLVFNPNKRLTAEEALE---------HPYVAQ 300 (337)
T ss_pred HHHHHHHhccCCcccccCHHHHhh---------Chhhhh
Confidence 999999999999999999999999 999974
No 313
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.1e-37 Score=321.86 Aligned_cols=266 Identities=21% Similarity=0.234 Sum_probs=198.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|.+.+.||.|+||.||+|.+. +..||+|.+...... ..+.+.+|+.+++.+ +|||
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~-----------------~~~~~~~Ei~~l~~l----~h~~ 63 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ-----------------SVKHALREIKIIRRL----DHDN 63 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc-----------------hHHHHHHHHHHHHhc----CCCc
Confidence 78999999999999999999986 789999998532210 123455688999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.+....... ..+........+++|||++++|.+++... .+++..+..++.|+++||
T Consensus 64 i~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL 127 (342)
T cd07854 64 IVKVYEVLGPSGSDLTE--------------DVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGL 127 (342)
T ss_pred chhhHhhhccccccccc--------------ccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHH
Confidence 99999887753211000 00011223468999999988999888654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||+++.+. ..+||+|||+++........ ........||..|+|||++..... +
T Consensus 128 ~~LH~~givH~dikp~Nili~~~~----~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-----~ 196 (342)
T cd07854 128 KYIHSANVLHRDLKPANVFINTED----LVLKIGDFGLARIVDPHYSH--KGYLSEGLVTKWYRSPRLLLSPNN-----Y 196 (342)
T ss_pred HHHHhCCcccCCCCHHHEEEcCCC----ceEEECCcccceecCCcccc--ccccccccccccccCHHHHhCccc-----c
Confidence 999999999999999999997542 57899999999765432111 111112357889999998754321 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------------cccc-----CCCCCCccHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------------VNAL-----PQLNTNVPEVM 481 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------------~~~~-----~~~~~~~~~~l 481 (588)
+.++|||||||++|||++|+.||.......... .... ......++.++
T Consensus 197 ~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (342)
T cd07854 197 TKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEA 276 (342)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHH
Confidence 568999999999999999999996531100000 0000 01123567889
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.++|.+||+.||.+|||+++++. |||++
T Consensus 277 ~~li~~~L~~dP~~R~t~~ell~---------h~~~~ 304 (342)
T cd07854 277 LDFLEQILTFNPMDRLTAEEALM---------HPYMS 304 (342)
T ss_pred HHHHHHHhCCCchhccCHHHHhC---------CCccc
Confidence 99999999999999999999999 99997
No 314
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8e-37 Score=309.13 Aligned_cols=241 Identities=18% Similarity=0.217 Sum_probs=180.1
Q ss_pred eeecccCceeEEEEEEC--------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 202 KFIAKGTNAVVYEATFR--------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
+.||+|+||.||+|+.. ...||+|.+.... . . ....+.+|+.++..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~--~------------~~~~~~~~~~~l~~l-- 61 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---R--D------------ISLAFFETASMMRQV-- 61 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---h--h------------HHHHHHHHHHHHHhC--
Confidence 36899999999999854 3368999874211 0 0 122355677888876
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+||||+++++++.+.. ..+++|||+ +|+|..++......+++..++.++
T Consensus 62 --~hp~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~ 111 (262)
T cd05077 62 --SHKHIVLLYGVCVRDV----------------------------ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA 111 (262)
T ss_pred --CCCCEeeEEEEEecCC----------------------------CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH
Confidence 9999999999987632 378999999 578999987765579999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCC--CCCceeeeccccccccCCCCccccccccccccCCccccchhHHhc
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDN--TCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~--~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
.||++||+|||+++|+||||||+|||++.+... ....++++|||++...... ....|+..|+|||++..
T Consensus 112 ~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~ 182 (262)
T cd05077 112 KQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR---------QECVERIPWIAPECVED 182 (262)
T ss_pred HHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc---------ccccccccccChhhhcC
Confidence 999999999999999999999999999865211 1124899999998654321 13457889999998863
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHh-cCCCCCcccccccccc-ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIF-GHDNPFYQSARNTDYE-VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~Ell-tG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
... ++.++|||||||++|||+ +|..||.......... ...........++++.+||.+||+.||.+||++.++
T Consensus 183 ~~~-----~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~i 257 (262)
T cd05077 183 SKN-----LSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAI 257 (262)
T ss_pred CCC-----CCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHH
Confidence 321 456899999999999998 5888886532211110 011112233456789999999999999999999998
Q ss_pred HHH
Q psy4039 503 ATV 505 (588)
Q Consensus 503 l~~ 505 (588)
+..
T Consensus 258 l~~ 260 (262)
T cd05077 258 MRD 260 (262)
T ss_pred HHh
Confidence 874
No 315
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.9e-37 Score=308.02 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=186.4
Q ss_pred eeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 202 KFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.||.|+||.||+|.+. ++.||||.+......... ....+..|..++... ..||||+++++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~e~~~~~~~---~~~~~i~~~~~ 64 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKN--------------QVTNVKAERAIMMIQ---GESPYVAKLYY 64 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHH--------------HHHHHHHHHHHHhhc---CCCCCeeeeee
Confidence 56999999999999985 789999998532211100 001122343333322 48999999999
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++.+.. ..|++|||+ +++|.+++.... .+++..+..++.|+++||.|||+
T Consensus 65 ~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~ 115 (260)
T cd05611 65 SFQSKD----------------------------YLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQ 115 (260)
T ss_pred eEEcCC----------------------------eEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 987631 499999999 679999997654 78999999999999999999999
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSD 438 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksD 438 (588)
.+|+||||+|+||+++.+ +.++|+|||+++.... .....|++.|+|||.+.+.. ++.++|
T Consensus 116 ~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~---------~~~~~~~~~y~~pe~~~~~~------~~~~~D 175 (260)
T cd05611 116 RGIIHRDIKPENLLIDQT-----GHLKLTDFGLSRNGLE---------NKKFVGTPDYLAPETILGVG------DDKMSD 175 (260)
T ss_pred CCeecCCCCHHHeEECCC-----CcEEEeecccceeccc---------cccCCCCcCccChhhhcCCC------Ccchhh
Confidence 999999999999999987 7899999999875432 11346889999999987654 457899
Q ss_pred hhhHHHHHHHHhcCCCCCcccccccccc------ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhc
Q psy4039 439 AWTAGTVAYEIFGHDNPFYQSARNTDYE------VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWA 512 (588)
Q Consensus 439 VwS~Gvil~ElltG~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~ 512 (588)
|||||+++|||++|..||........+. ..........+++++.+++.+||+.||++||++.++.+.+.
T Consensus 176 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~----- 250 (260)
T cd05611 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS----- 250 (260)
T ss_pred hHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc-----
Confidence 9999999999999999996642221111 01112233467899999999999999999996643333333
Q ss_pred CCccccCC
Q psy4039 513 PKHWLYGA 520 (588)
Q Consensus 513 ~h~w~~~~ 520 (588)
|||++..
T Consensus 251 -~~~~~~~ 257 (260)
T cd05611 251 -HPFFKSI 257 (260)
T ss_pred -ChHhhcC
Confidence 9998643
No 316
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-36 Score=305.94 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=202.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||+|++|.||+|++. ++.||||++...... .....+.+|+.++..+ +|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~----------------~~~~~~~~e~~~l~~l----~~~~ 60 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE----------------EFRKQLLRELKTLRSC----ESPY 60 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch----------------HHHHHHHHHHHHHHhc----CCCC
Confidence 46889999999999999999997 789999998542211 1234466788888887 7999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++... ..++++|||+. ++|.+++.... .+++..+..++.|+++|
T Consensus 61 i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~ 111 (264)
T cd06623 61 VVKCYGAFYKE----------------------------GEISIVLEYMDGGSLADLLKKVG-KIPEPVLAYIARQILKG 111 (264)
T ss_pred eeeEEEEEccC----------------------------CeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 99999998763 24999999995 89999998753 89999999999999999
Q ss_pred HHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 353 VTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 353 L~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
|.|||+ .+++||||+|+||+++.+ +.++|+|||.+......... .....|+..|+|||.+....
T Consensus 112 l~~lh~~~~~~H~~l~~~ni~~~~~-----~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~y~~pE~~~~~~----- 176 (264)
T cd06623 112 LDYLHTKRHIIHRDIKPSNLLINSK-----GEVKIADFGISKVLENTLDQ-----CNTFVGTVTYMSPERIQGES----- 176 (264)
T ss_pred HHHHhccCCCccCCCCHHHEEECCC-----CCEEEccCccceecccCCCc-----ccceeecccccCHhhhCCCC-----
Confidence 999999 999999999999999987 78999999999876442211 11356889999999986653
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCccccc------cccccccccCCCCCC-ccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSAR------NTDYEVNALPQLNTN-VPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~------~~~~~~~~~~~~~~~-~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
++.++||||||+++|+|++|..||..... .........+..+.. ++..+.+++.+||+.+|++||++.++++
T Consensus 177 -~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 177 -YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred -CCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 45789999999999999999999966421 111112233344555 8899999999999999999999999999
Q ss_pred HHhhhhhcCCccccC
Q psy4039 505 VCQLYLWAPKHWLYG 519 (588)
Q Consensus 505 ~L~~~~~~~h~w~~~ 519 (588)
|||++.
T Consensus 256 ---------~~~~~~ 261 (264)
T cd06623 256 ---------HPFIKK 261 (264)
T ss_pred ---------CHHHHh
Confidence 999863
No 317
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-36 Score=320.81 Aligned_cols=256 Identities=20% Similarity=0.247 Sum_probs=197.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||.||+|.+. +..||||++..... . ....+.+.+|+.+++.+ +|||
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~---~------------~~~~~~~~~Ei~~l~~l----~h~~ 77 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---S------------IIHAKRTYRELRLLKHM----KHEN 77 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch---h------------hHHHHHHHHHHHHHHHc----CCCc
Confidence 88999999999999999999875 78999999843110 0 00123355688999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++.... ........++++++++++|.+++... .+++..+..++.|+++||
T Consensus 78 iv~~~~~~~~~~----------------------~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL 133 (345)
T cd07877 78 VIGLLDVFTPAR----------------------SLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGL 133 (345)
T ss_pred ccceeeeeeecc----------------------cccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 999999886532 11112247899999999999888654 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+||+++.+ +.+||+|||+++...... ....||+.|+|||++.+... .
T Consensus 134 ~~LH~~~ivH~dlkp~NIll~~~-----~~~kl~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~-----~ 195 (345)
T cd07877 134 KYIHSADIIHRDLKPSNLAVNED-----CELKILDFGLARHTDDEM--------TGYVATRWYRAPEIMLNWMH-----Y 195 (345)
T ss_pred HHHHHCCeeecCCChHHEEEcCC-----CCEEEecccccccccccc--------cccccCCCccCHHHHhCccC-----C
Confidence 99999999999999999999987 789999999987643211 13468899999999865321 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc----------------------------ccccC-----CCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----------------------------VNALP-----QLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----------------------------~~~~~-----~~~~~~~~~ 480 (588)
+.++|||||||++|||++|+.||.......... ....+ ......+++
T Consensus 196 ~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (345)
T cd07877 196 NQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPL 275 (345)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHH
Confidence 468999999999999999999996421100000 00000 011245788
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGAT 521 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~ 521 (588)
+.++|.+||+.||.+||++.+++. |||++...
T Consensus 276 ~~~li~~~L~~dp~~R~t~~e~l~---------h~~f~~~~ 307 (345)
T cd07877 276 AVDLLEKMLVLDSDKRITAAQALA---------HAYFAQYH 307 (345)
T ss_pred HHHHHHHHcCCChhhcCCHHHHhc---------ChhhhhcC
Confidence 999999999999999999999999 99998433
No 318
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.5e-37 Score=316.30 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=196.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|+....||+|+||.||+|.+. ++.||||.+..... ...+.+.+|+.++..+ .|||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----------------~~~~~~~~e~~~l~~l----~hp~ 79 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----------------QRRELLFNEVVIMRDY----QHQN 79 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----------------chHHHHHHHHHHHHhC----CCCc
Confidence 44555668999999999999885 78999999843211 0123455688888877 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.... ..+++|||+ +++|.+++... .+++..+..++.|++.|
T Consensus 80 i~~~~~~~~~~~----------------------------~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~ 129 (297)
T cd06659 80 VVEMYKSYLVGE----------------------------ELWVLMEFLQGGALTDIVSQT--RLNEEQIATVCESVLQA 129 (297)
T ss_pred hhhhhhheeeCC----------------------------eEEEEEecCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHH
Confidence 999999887631 489999999 57999887654 78999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+++|+||||||+||+++.+ +.+||+|||++........ ......|++.|+|||++.+..
T Consensus 130 L~~LH~~~ivH~dl~p~Nill~~~-----~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------ 193 (297)
T cd06659 130 LCYLHSQGVIHRDIKSDSILLTLD-----GRVKLSDFGFCAQISKDVP-----KRKSLVGTPYWMAPEVISRTP------ 193 (297)
T ss_pred HHHHHhCCeecCCCCHHHeEEccC-----CcEEEeechhHhhcccccc-----cccceecCccccCHHHHccCC------
Confidence 999999999999999999999987 7999999999876543211 112356899999999997654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccccccc-----ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-----VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|||++|+.||.......... .......+..+++++.+++.+||+.+|.+||+++++++
T Consensus 194 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~--- 270 (297)
T cd06659 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD--- 270 (297)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh---
Confidence 4578999999999999999999997532111110 01111223467889999999999999999999999999
Q ss_pred hhhhcCCccccCC
Q psy4039 508 LYLWAPKHWLYGA 520 (588)
Q Consensus 508 ~~~~~~h~w~~~~ 520 (588)
|||+...
T Consensus 271 ------~~~~~~~ 277 (297)
T cd06659 271 ------HPFLLQT 277 (297)
T ss_pred ------ChhhccC
Confidence 9998733
No 319
>KOG4645|consensus
Probab=100.00 E-value=1.1e-38 Score=359.13 Aligned_cols=250 Identities=27% Similarity=0.296 Sum_probs=204.5
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
++..+..||.|.||.||.|... |.-.|||-+...+.. ......+.+|..++..+ +|||+
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---------------~k~~~~i~eEm~vlE~l----nHpNl 1296 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---------------HKTFKLIAEEMKVLEGL----NHPNL 1296 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc---------------cccCcchHHHHHHHHhc----cCccc
Confidence 3455778999999999999987 888999988533221 11344566799999987 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++||+-.+.. .++|.|||| +|+|.+.+...+ ..++.....+..|++.|+
T Consensus 1297 V~YyGVEvHRe----------------------------kv~IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gl 1347 (1509)
T KOG4645|consen 1297 VRYYGVEVHRE----------------------------KVYIFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGL 1347 (1509)
T ss_pred cccCceeecHH----------------------------HHHHHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHH
Confidence 99999866532 388999999 789999987543 688888999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCC-ccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGL-SMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~-~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
.|||++|||||||||.||+++.+ +.+|++|||.|..+.... .++ .......||+.|||||++.+..+.-
T Consensus 1348 a~LH~~gIVHRDIK~aNI~Ld~~-----g~iK~~DFGsa~ki~~~~~~~~--~el~~~~GT~~YMAPEvit~t~~kG--- 1417 (1509)
T KOG4645|consen 1348 AYLHEHGIVHRDIKPANILLDFN-----GLIKYGDFGSAVKIKNNAQTMP--GELQSMMGTPMYMAPEVITGTKGKG--- 1417 (1509)
T ss_pred HHHHhcCceecCCCccceeeecC-----CcEEeecccceeEecCchhcCC--HHHHhhcCCchhcCchhhcccccCC---
Confidence 99999999999999999999998 899999999999876642 121 2223578999999999998765311
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccc----ccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSA----RNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~----~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
...+.||||+||++.||+||+.||..-. .......+..|++|..++.+-++++.+||+.||.+|.++.|+++
T Consensus 1418 ~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1418 HGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 3357899999999999999999997632 22233446788999999999999999999999999999999888
No 320
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-36 Score=308.61 Aligned_cols=243 Identities=23% Similarity=0.331 Sum_probs=192.0
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|+||+||+|.+. ++.||+|.+....... ......+.+|+.+++.+ +||||+++++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~--------------~~~~~~~~~e~~~l~~l----~~~~i~~~~~~~ 62 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK--------------RKGEQMALNEKKILEKV----SSRFIVSLAYAF 62 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh--------------hhhhHHHHHHHHHHHhC----CCCCEeeeeeEE
Confidence 699999999999876 7899999985321100 01123345688899887 899999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
... ...++||||+ +++|.+++.... ..+++.++..++.|++.||.|||++
T Consensus 63 ~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 114 (277)
T cd05577 63 ETK----------------------------DDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR 114 (277)
T ss_pred ecC----------------------------CeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 753 1489999999 579999998653 3689999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
||+||||||+||+++.+ +.++|+|||.+......... ....|+..|+|||++.+.. ++.++||
T Consensus 115 ~i~H~di~p~Nil~~~~-----~~~~l~dfg~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~------~~~~~Di 177 (277)
T cd05577 115 RIVYRDLKPENVLLDDH-----GNVRISDLGLAVELKGGKKI------KGRAGTPGYMAPEVLQGEV------YDFSVDW 177 (277)
T ss_pred CcccCCCCHHHEEECCC-----CCEEEccCcchhhhccCCcc------ccccCCCCcCCHHHhcCCC------CCchhhh
Confidence 99999999999999987 78999999998765432111 1345788999999987654 4468999
Q ss_pred hhHHHHHHHHhcCCCCCcccccccc------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CHHHHHHHHhh
Q psy4039 440 WTAGTVAYEIFGHDNPFYQSARNTD------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SAELAATVCQL 508 (588)
Q Consensus 440 wS~Gvil~ElltG~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~~e~l~~L~~ 508 (588)
|||||++|+|++|+.||........ .........+..+++++.++|.+||+.||.+|| ++.++++
T Consensus 178 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~---- 253 (277)
T cd05577 178 FALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE---- 253 (277)
T ss_pred HHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh----
Confidence 9999999999999999965322111 011123345567899999999999999999999 8888888
Q ss_pred hhhcCCcccc
Q psy4039 509 YLWAPKHWLY 518 (588)
Q Consensus 509 ~~~~~h~w~~ 518 (588)
|||+.
T Consensus 254 -----h~~~~ 258 (277)
T cd05577 254 -----HPLFK 258 (277)
T ss_pred -----Chhhh
Confidence 99996
No 321
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-36 Score=309.63 Aligned_cols=257 Identities=21% Similarity=0.349 Sum_probs=199.7
Q ss_pred CeEEeeeecccCceeEEEEEE-----CCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATF-----RGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~-----~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+|++.+.||+|+||.||.+.. .|..||+|++...... ......+.+.+|+.+++.+ ..|
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~-------------~~~~~~~~~~~e~~~l~~l---~~~ 64 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV-------------QKAKTTEHTRTERQVLEHI---RQS 64 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh-------------hcchHHHHHHHHHHHHHhc---ccC
Confidence 478899999999999999987 3788999998531110 0011223456788888877 469
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||+++++++... ...++||||+ +++|.+++.... .+++..+..++.|++
T Consensus 65 ~~i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~ 115 (290)
T cd05613 65 PFLVTLHYAFQTD----------------------------TKLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIV 115 (290)
T ss_pred CChhceeeEeecC----------------------------CeEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 9999999888752 2489999999 579999998764 789999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||+.|++||||||+|||++.+ +.+||+|||+++........ ......|+..|+|||.+......
T Consensus 116 ~al~~lH~~~i~H~dl~p~nil~~~~-----~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~-- 184 (290)
T cd05613 116 LALEHLHKLGIIYRDIKLENILLDSN-----GHVVLTDFGLSKEFHEDEVE----RAYSFCGTIEYMAPDIVRGGDGG-- 184 (290)
T ss_pred HHHHHHHhCCeeccCCCHHHeEECCC-----CCEEEeeCccceeccccccc----ccccccCCcccCChhhccCCCCC--
Confidence 99999999999999999999999987 78999999999775432111 11135689999999998654322
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCC-----CH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRP-----SA 499 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rp-----s~ 499 (588)
...++||||||+++|+|++|..||........ ......++.+..+++.+.+++.+||+.||++|| ++
T Consensus 185 --~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~ 262 (290)
T cd05613 185 --HDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDA 262 (290)
T ss_pred --CCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCH
Confidence 34679999999999999999999964211111 011123345667889999999999999999997 88
Q ss_pred HHHHHHHhhhhhcCCccccCC
Q psy4039 500 ELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 500 ~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+++++ |||++..
T Consensus 263 ~~l~~---------~~~~~~~ 274 (290)
T cd05613 263 DEIKK---------HPFFQKI 274 (290)
T ss_pred HHHHc---------CcccccC
Confidence 99888 9999754
No 322
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.9e-36 Score=313.64 Aligned_cols=255 Identities=23% Similarity=0.279 Sum_probs=198.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..|+..+.||+|+||.||++.+. +..||+|.+......... ....+.+|+.+++.+ +|||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~--------------~~~~~~~e~~~l~~l----~h~~ 86 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE--------------KWQDIIKEVKFLQRI----KHPN 86 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchH--------------HHHHHHHHHHHHHhC----CCCC
Confidence 44778889999999999999985 789999998532211110 112355688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
++++++++.+.. ..++||||+.|+|.+++......+++.++..++.|++.||
T Consensus 87 iv~~~~~~~~~~----------------------------~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l 138 (317)
T cd06635 87 SIEYKGCYLREH----------------------------TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGL 138 (317)
T ss_pred EEEEEEEEeeCC----------------------------eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 999999987632 3899999999899888876655799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++|+||||+|+||+++.+ +.++|+|||++...... ....|++.|+|||++..... ...
T Consensus 139 ~~lH~~~i~H~dL~p~Nil~~~~-----~~~kl~dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~---~~~ 201 (317)
T cd06635 139 AYLHSHNMIHRDIKAGNILLTEP-----GQVKLADFGSASIASPA---------NSFVGTPYWMAPEVILAMDE---GQY 201 (317)
T ss_pred HHHHHCCcccCCCCcccEEECCC-----CCEEEecCCCccccCCc---------ccccCCccccChhhhhcCCC---CCC
Confidence 99999999999999999999887 78999999998654321 13468899999999853211 014
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc---c-ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---E-VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~-~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++|||||||++|||++|..||......... . ....+.....+++.+++++.+||+.+|.+||++.++++
T Consensus 202 ~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~----- 276 (317)
T cd06635 202 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLK----- 276 (317)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHh-----
Confidence 57899999999999999999998764221111 1 11111223457888999999999999999999999998
Q ss_pred hhcCCccccCCCC
Q psy4039 510 LWAPKHWLYGATP 522 (588)
Q Consensus 510 ~~~~h~w~~~~~~ 522 (588)
|+|+....+
T Consensus 277 ----~~~~~~~~~ 285 (317)
T cd06635 277 ----HMFVLRERP 285 (317)
T ss_pred ----ChhhhccCc
Confidence 999874433
No 323
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.3e-36 Score=309.62 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=196.8
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
.|...+.||+|++|.||++.+. ++.||+|.+..... ...+.+.+|+.+++.+ .||||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-----------------~~~~~~~~e~~~l~~~----~h~~v 78 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-----------------QRRELLFNEVVIMRDY----QHPNI 78 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-----------------hHHHHHHHHHHHHHHc----CCCCh
Confidence 4555679999999999999875 78899998842110 0122355688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.... ..++++||+ +++|.+++... .+++.++..++.|++.||
T Consensus 79 v~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l 128 (285)
T cd06648 79 VEMYSSYLVGD----------------------------ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLAVLKAL 128 (285)
T ss_pred heEEEEEEcCC----------------------------eEEEEEeccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHH
Confidence 99999887521 489999999 67999999873 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++||+||||||+||+++.+ +.++|+|||++........ ......|++.|+|||.+.+.. +
T Consensus 129 ~~lH~~~i~H~dl~p~Nil~~~~-----~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~------~ 192 (285)
T cd06648 129 SFLHAQGVIHRDIKSDSILLTSD-----GRVKLSDFGFCAQVSKEVP-----RRKSLVGTPYWMAPEVISRLP------Y 192 (285)
T ss_pred HHHHhCCeecCCCChhhEEEcCC-----CcEEEcccccchhhccCCc-----ccccccCCccccCHHHhcCCC------C
Confidence 99999999999999999999987 7999999998876433211 111356899999999987654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
+.++|||||||++|||++|..||......... .....+. .+..++..+.+++.+||+.||++||++.++++
T Consensus 193 ~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~---- 268 (285)
T cd06648 193 GTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN---- 268 (285)
T ss_pred CCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc----
Confidence 57899999999999999999999763211111 1111111 12347889999999999999999999999998
Q ss_pred hhhcCCccccCCCC
Q psy4039 509 YLWAPKHWLYGATP 522 (588)
Q Consensus 509 ~~~~~h~w~~~~~~ 522 (588)
|+|++...+
T Consensus 269 -----~~~~~~~~~ 277 (285)
T cd06648 269 -----HPFLAKAGP 277 (285)
T ss_pred -----CcccccCCC
Confidence 999986554
No 324
>KOG0666|consensus
Probab=100.00 E-value=8.5e-38 Score=306.48 Aligned_cols=262 Identities=24% Similarity=0.265 Sum_probs=202.6
Q ss_pred CCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
..|+..+.||+|+||.||+|... ...+|||+++..... ..-....++|+.+++++
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~---------------tGiS~SAcREiaL~REl---- 84 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG---------------TGISMSACREIALLREL---- 84 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC---------------CCcCHHHHHHHHHHHHh----
Confidence 77899999999999999999665 347888887432110 01223457899999998
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh----cCCCCHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER----CAQLSMHERVLL 345 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~----~~~l~~~~~~~i 345 (588)
+|||||.|..+|... ...+++++||.+.+|.+.|+-+ ...++...+..|
T Consensus 85 ~h~nvi~Lv~Vfl~~---------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsi 137 (438)
T KOG0666|consen 85 KHPNVISLVKVFLSH---------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSI 137 (438)
T ss_pred cCCcchhHHHHHhcc---------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHH
Confidence 999999999888652 2259999999999999999743 246899999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.||+.|+.|||++=|+||||||.|||+..+.+.. +.+||+|||+||.+.+....-++. ...+-|+.|.|||++.+.
T Consensus 138 lwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgper-G~VKIaDlGlaR~~~~plkpl~s~--d~VVVTiWYRAPELLLGa 214 (438)
T KOG0666|consen 138 LWQILDGVHYLHSNWVLHRDLKPANILVMGDGPER-GRVKIADLGLARLFNNPLKPLASL--DPVVVTIWYRAPELLLGA 214 (438)
T ss_pred HHHHHhhhHHHhhhheeeccCCcceEEEeccCCcc-CeeEeecccHHHHhhccccccccC--CceEEEEEecChHHhccc
Confidence 99999999999999999999999999999876554 899999999999987754432222 256789999999999987
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccc----c---------cc------ccccCCC-------------
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT----D---------YE------VNALPQL------------- 473 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~----~---------~~------~~~~~~~------------- 473 (588)
.. |+.+.||||+|||+.||++-.+.|.+..... . ++ ...+|.+
T Consensus 215 ~h-----YT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f 289 (438)
T KOG0666|consen 215 RH-----YTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF 289 (438)
T ss_pred cc-----ccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHh
Confidence 63 5567899999999999999888876521000 0 00 0111110
Q ss_pred ----C------------CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 474 ----N------------TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 474 ----~------------~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
. ..-++...+|+.+||+.||.+|.|++++++ |++|...
T Consensus 290 ~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle---------h~yF~~d 343 (438)
T KOG0666|consen 290 RRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE---------HPYFTED 343 (438)
T ss_pred HHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc---------ccccccC
Confidence 0 112344789999999999999999999999 9999833
No 325
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.3e-36 Score=302.97 Aligned_cols=255 Identities=25% Similarity=0.310 Sum_probs=198.3
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||+|.+. ++.||+|.+...... . ...+.+.+|+.+++.+ +|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~------------~~~~~~~~e~~~~~~l----~~~~i 61 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---P------------KTIKEIADEMKVLELL----KHPNL 61 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---h------------HHHHHHHHHHHHHHhC----CCCCh
Confidence 4888999999999999999875 789999998643211 0 0223456788888887 99999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..++|+||+ +++|.+++.... .+++..+..++.|++.||
T Consensus 62 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l 112 (264)
T cd06626 62 VKYYGVEVHRE----------------------------KVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGL 112 (264)
T ss_pred hheeeeEecCC----------------------------EEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHH
Confidence 99999876521 489999999 589999998753 689999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+|+||||+||+++++ +.+||+|||++.......... ........|++.|+|||++.+... ...
T Consensus 113 ~~lh~~~i~H~dl~~~nil~~~~-----~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~---~~~ 183 (264)
T cd06626 113 AYLHSHGIVHRDIKPANIFLDHN-----GVIKLGDFGCAVKLKNNTTTM-GEEVQSLAGTPAYMAPEVITGGKG---KGH 183 (264)
T ss_pred HHHHHCCcccCCCCHHHEEECCC-----CCEEEcccccccccCCCCCcc-cccccCCcCCcCccChhhccCCCC---CCC
Confidence 99999999999999999999987 789999999998764422211 100113568899999999876541 013
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc----ccccccCCCCC--CccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----~~~~~~~~~~~--~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
..++||||||+++|||++|..||........ ......+.++. .+++.+.+++.+||+.||.+|||+++++.
T Consensus 184 ~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~--- 260 (264)
T cd06626 184 GRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ--- 260 (264)
T ss_pred CcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc---
Confidence 4689999999999999999999965321111 11122233333 34889999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 261 ------~~~~ 264 (264)
T cd06626 261 ------HPFV 264 (264)
T ss_pred ------CCCC
Confidence 9996
No 326
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.2e-36 Score=310.16 Aligned_cols=268 Identities=13% Similarity=0.104 Sum_probs=185.0
Q ss_pred cccCCeEEeeeecccCceeEEEEEECC-----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFRG-----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~g-----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
+.-++|++.+.||+|+||+||+|.+.+ ..+|+|+..... ... ....... ..........+...+..
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~-~~e~~~~--~~~~~~~~~~~~~~~~~--- 79 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETI-VMETLVY--NNIYDIDKIALWKNIHN--- 79 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---Cch-hhHHHHH--HhhhhHHHHHHHHHhcc---
Confidence 334789999999999999999999863 356776542111 100 0000000 00001111112222333
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
..|+||+++++++.... ......+++|+++..++.+.+.... ..++..+..++.
T Consensus 80 -~~h~~i~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~ 133 (294)
T PHA02882 80 -IDHLGIPKYYGCGSFKR------------------------CRMYYRFILLEKLVENTKEIFKRIK-CKNKKLIKNIMK 133 (294)
T ss_pred -CCCCCCCcEEEeeeEec------------------------CCceEEEEEEehhccCHHHHHHhhc-cCCHHHHHHHHH
Confidence 38999999998765521 1112368889988777877776542 568889999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCC-ccccc-cccccccCCccccchhHHhcC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGL-SMQYS-SADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~-~~~~~-~~~~~~~GT~~Y~APE~l~~~ 425 (588)
|+++||.|||+++|+||||||+|||++.+ +.++|+|||+|+...... ..... .......||+.|+|||+..+.
T Consensus 134 qi~~~l~~lH~~~iiHrDiKp~Nill~~~-----~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~ 208 (294)
T PHA02882 134 DMLTTLEYIHEHGISHGDIKPENIMVDGN-----NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA 208 (294)
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEEcCC-----CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC
Confidence 99999999999999999999999999877 789999999998754311 11111 111235699999999998766
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc--------c-ccccc-CCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------Y-EVNAL-PQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--------~-~~~~~-~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
. ++.++|||||||++|||++|..||.+...... + ..... ......+|+++.+++..||..+|++
T Consensus 209 ~------~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (294)
T PHA02882 209 C------VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEE 282 (294)
T ss_pred C------CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCC
Confidence 5 45789999999999999999999976421111 0 00000 0123457899999999999999999
Q ss_pred CCCHHHHHHHH
Q psy4039 496 RPSAELAATVC 506 (588)
Q Consensus 496 Rps~~e~l~~L 506 (588)
||+++++.+.+
T Consensus 283 rp~~~~l~~~~ 293 (294)
T PHA02882 283 KPDYDALIKIF 293 (294)
T ss_pred CCCHHHHHHhh
Confidence 99999988743
No 327
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.2e-36 Score=309.91 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=181.6
Q ss_pred eecccCceeEEEEEEC--------------------------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhh
Q psy4039 203 FIAKGTNAVVYEATFR--------------------------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRL 256 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~--------------------------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~ 256 (588)
.||+|+||.||+|.+. ...||+|++.... .. ....+.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~------------~~~~~~ 64 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH-----RD------------IALAFF 64 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH-----HH------------HHHHHH
Confidence 5999999999999853 2468999873210 00 123355
Q ss_pred hHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcC
Q psy4039 257 NEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCA 335 (588)
Q Consensus 257 ~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~ 335 (588)
+|+.+++.+ +||||+++++++.+.. ..++||||+ +|+|..++.....
T Consensus 65 ~~~~~~~~l----~h~niv~~~~~~~~~~----------------------------~~~lv~ey~~~g~L~~~l~~~~~ 112 (274)
T cd05076 65 ETASLMSQV----SHIHLAFVHGVCVRGS----------------------------ENIMVEEFVEHGPLDVCLRKEKG 112 (274)
T ss_pred HHHHHHhcC----CCCCeeeEEEEEEeCC----------------------------ceEEEEecCCCCcHHHHHHhcCC
Confidence 677788776 9999999999987632 389999999 6899999977555
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCC--CCCCceeeeccccccccCCCCccccccccccccCC
Q psy4039 336 QLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSED--NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGN 413 (588)
Q Consensus 336 ~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~--~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT 413 (588)
.+++..+..++.|+++||+|||+++|+||||||+|||++.... .....+|++|||++...... ....++
T Consensus 113 ~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---------~~~~~~ 183 (274)
T cd05076 113 RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---------EERVER 183 (274)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---------cccccC
Confidence 7999999999999999999999999999999999999986421 11135899999987543221 123578
Q ss_pred ccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHh-cCCCCCcccccccccc-ccccCCCCCCccHHHHHHHHHhhhh
Q psy4039 414 VALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIF-GHDNPFYQSARNTDYE-VNALPQLNTNVPEVMRRLVAKLLEN 491 (588)
Q Consensus 414 ~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ell-tG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~l~~Li~~~L~~ 491 (588)
+.|+|||.+.+... .+.++|||||||++|||+ +|..||.......... .......+...++++.++|.+||+.
T Consensus 184 ~~~~aPe~~~~~~~-----~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~ 258 (274)
T cd05076 184 IPWIAPECVPGGNS-----LSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTY 258 (274)
T ss_pred CcccCchhhcCCCC-----CCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHccc
Confidence 89999998865321 457899999999999984 7999997643221111 1112233445567899999999999
Q ss_pred CCCCCCCHHHHHHHH
Q psy4039 492 DPSDRPSAELAATVC 506 (588)
Q Consensus 492 dP~~Rps~~e~l~~L 506 (588)
+|++|||+.++++.|
T Consensus 259 ~p~~Rps~~~il~~L 273 (274)
T cd05076 259 EPTQRPSFRTILRDL 273 (274)
T ss_pred ChhhCcCHHHHHHhh
Confidence 999999999998744
No 328
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.6e-36 Score=301.95 Aligned_cols=244 Identities=25% Similarity=0.311 Sum_probs=191.4
Q ss_pred eeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 202 KFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
++||.|+||.||+|.+. ++.||+|.+...... .....+.+|+.+++.+ .||||++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~----------------~~~~~~~~e~~~l~~l----~~~~i~~~~~~ 60 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP----------------DLKRKFLQEAEILKQY----DHPNIVKLIGV 60 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH----------------HHHHHHHHHHHHHHhC----CCCCeEEEEEE
Confidence 46999999999999987 899999998532211 0123456788888887 89999999998
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
+.+.. ..++||||+ +++|.+++......+++..+..++.+++.||.|||++
T Consensus 61 ~~~~~----------------------------~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~ 112 (251)
T cd05041 61 CVQKQ----------------------------PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK 112 (251)
T ss_pred EecCC----------------------------CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 87632 389999999 6799999987655789999999999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
+++||||||+|||++.+ +.++|+|||++.....+.... ......++..|+|||++.+.. .+.++||
T Consensus 113 ~i~h~di~p~nili~~~-----~~~~l~d~g~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~------~~~~~Di 178 (251)
T cd05041 113 NCIHRDLAARNCLVGEN-----NVLKISDFGMSREEEGGIYTV---SDGLKQIPIKWTAPEALNYGR------YTSESDV 178 (251)
T ss_pred CEehhhcCcceEEEcCC-----CcEEEeeccccccccCCccee---ccccCcceeccCChHhhccCC------CCcchhH
Confidence 99999999999999987 789999999997654322111 111223466899999987654 4578999
Q ss_pred hhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 440 WTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 440 wS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|||||++|||++ |..||........ .........+..+|.++.+++.+||..+|.+|||++++++.|+
T Consensus 179 ~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 179 WSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999998 8888865422111 1111223345678899999999999999999999999988654
No 329
>KOG2345|consensus
Probab=100.00 E-value=4.9e-37 Score=293.39 Aligned_cols=267 Identities=20% Similarity=0.229 Sum_probs=204.1
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
.+..++-++|.+.+.||+|||+.||.+..- +..||+|++...... ..+...+|++.-+++
T Consensus 14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~-----------------~~e~~~rEid~~rkf- 75 (302)
T KOG2345|consen 14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE-----------------DIEEALREIDNHRKF- 75 (302)
T ss_pred CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchH-----------------HHHHHHHHHHHHHhh-
Confidence 334556688999999999999999998854 789999999542211 223445689988887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHER 342 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~ 342 (588)
+||||++++++...+. ++ .....|++++|+ .|||.+.+... +..+++.+.
T Consensus 76 ---~s~~vl~l~dh~l~~~----------------------~D-~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~i 129 (302)
T KOG2345|consen 76 ---NSPNVLRLVDHQLREE----------------------KD-GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQI 129 (302)
T ss_pred ---CCcchHHHHHHHHHhh----------------------cc-CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHH
Confidence 9999999998876643 11 234699999999 79999999754 447999999
Q ss_pred HHHHHHHHHHHHHHHhCC--ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc----ccccccccCCccc
Q psy4039 343 VLLFTQLLEGVTHLNMHR--TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY----SSADIELGGNVAL 416 (588)
Q Consensus 343 ~~i~~ql~~gL~yLH~~~--IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~----~~~~~~~~GT~~Y 416 (588)
..|+.+|++||.+||+.. .+||||||.|||+.++ +.++|.|||.+....-...... --......-|..|
T Consensus 130 L~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~-----~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~py 204 (302)
T KOG2345|consen 130 LWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS-----GLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPY 204 (302)
T ss_pred HHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC-----CceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcc
Confidence 999999999999999988 9999999999999987 7899999999876443111100 0001123468899
Q ss_pred cchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc------c-ccccCCCCCCccHHHHHHHHHhh
Q psy4039 417 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------E-VNALPQLNTNVPEVMRRLVAKLL 489 (588)
Q Consensus 417 ~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------~-~~~~~~~~~~~~~~l~~Li~~~L 489 (588)
.|||++.-+.+. ..++++|||||||++|+|+.|..||........- . ....|. ...+|+.+.++|+.||
T Consensus 205 RAPELf~vk~~~---ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~-~~~yse~l~~lik~ml 280 (302)
T KOG2345|consen 205 RAPELFNVKSHC---TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPN-SSRYSEALHQLIKSML 280 (302)
T ss_pred cCchheecccCc---ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCC-CCCccHHHHHHHHHHh
Confidence 999999765432 1468999999999999999999999763322111 1 112222 2348999999999999
Q ss_pred hhCCCCCCCHHHHHHHHhh
Q psy4039 490 ENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~~ 508 (588)
+.||.+||++.+++..++.
T Consensus 281 qvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 281 QVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred cCCcccCCCHHHHHHHHHh
Confidence 9999999999999886653
No 330
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.2e-36 Score=320.39 Aligned_cols=256 Identities=22% Similarity=0.249 Sum_probs=199.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++...||+|+||.||+|.+. +..||||++.... .. ......+.+|+.+++.+ .|||
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~---~~------------~~~~~~~~~E~~~l~~l----~h~~ 75 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF---QS------------AIHAKRTYRELRLLKHM----DHEN 75 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc---ch------------hhHHHHHHHHHHHHHhc----cCCC
Confidence 78999999999999999999996 7899999974211 00 00112345688888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|+++++++..... .......++|+||++++|.+++... .+++..+..++.|+++||
T Consensus 76 iv~~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL 131 (343)
T cd07851 76 VIGLLDVFTPASS----------------------LEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGL 131 (343)
T ss_pred HHHHHHHhhcccc----------------------ccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 9999988765321 1122348999999999999998764 799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||+++.+ +.++|+|||++....... ....+|..|+|||++.+... .
T Consensus 132 ~~LH~~gi~H~dlkp~Nill~~~-----~~~kL~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~-----~ 193 (343)
T cd07851 132 KYIHSAGIIHRDLKPSNIAVNED-----CELKILDFGLARHTDDEM--------TGYVATRWYRAPEIMLNWMH-----Y 193 (343)
T ss_pred HHHHHCCeecCCCCHHHeEECCC-----CCEEEccccccccccccc--------cCCcccccccCHHHHhCCCC-----C
Confidence 99999999999999999999987 789999999997654321 13467889999999865321 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccccc------------------------------c---ccCCCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV------------------------------N---ALPQLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~------------------------------~---~~~~~~~~~~~~ 480 (588)
+.++|||||||++|||++|+.||.+......+.. . ........++++
T Consensus 194 ~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 273 (343)
T cd07851 194 NQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPL 273 (343)
T ss_pred CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHH
Confidence 5789999999999999999999965321110000 0 000112345889
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCC
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGAT 521 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~ 521 (588)
+.++|.+||+.||.+|||+.++++ |||+....
T Consensus 274 l~dli~~~l~~~P~~Rpt~~ell~---------h~~~~~~~ 305 (343)
T cd07851 274 AIDLLEKMLVLDPDKRITAAEALA---------HPYLAEYH 305 (343)
T ss_pred HHHHHHHhCCCChhhCCCHHHHhc---------CCCccccC
Confidence 999999999999999999999998 99998443
No 331
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.2e-36 Score=311.33 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=197.0
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|...+.||+|+||+||+|++. +..||+|.+......... ....+.+|+.+++.+ +||||+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~--------------~~~~~~~E~~~l~~l----~h~~iv 84 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE--------------KWQDIIKEVKFLQQL----KHPNTI 84 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchH--------------HHHHHHHHHHHHHhC----CCCCCc
Confidence 555677999999999999985 789999998532211110 112355688888887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++++.+.. ..|++|||+.|+|.+++......+++.++..++.|++.||.|
T Consensus 85 ~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~ 136 (313)
T cd06633 85 EYKGCYLKEH----------------------------TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAY 136 (313)
T ss_pred cEEEEEEeCC----------------------------EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999988732 489999999989999887765579999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||++||+||||||+||+++.+ +.+||+|||++..... .....|+..|+|||++...... ..+.
T Consensus 137 LH~~gi~H~dl~p~nili~~~-----~~~kL~dfg~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~---~~~~ 199 (313)
T cd06633 137 LHSHNMIHRDIKAGNILLTEP-----GQVKLADFGSASKSSP---------ANSFVGTPYWMAPEVILAMDEG---QYDG 199 (313)
T ss_pred HHHCCeecCCCChhhEEECCC-----CCEEEeecCCCcccCC---------CCCccccccccChhhccccCCC---CCCc
Confidence 999999999999999999887 7899999998854221 1135689999999998532110 1346
Q ss_pred cCchhhHHHHHHHHhcCCCCCcccccccccc---ccccC-CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhh
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---VNALP-QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLW 511 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---~~~~~-~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~ 511 (588)
++|||||||++|||++|..||.......... ....+ .....++..+++++.+||+.+|.+||++++++.
T Consensus 200 ~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~------- 272 (313)
T cd06633 200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR------- 272 (313)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc-------
Confidence 8999999999999999999997642211110 11111 123456788999999999999999999999998
Q ss_pred cCCccccCCCC
Q psy4039 512 APKHWLYGATP 522 (588)
Q Consensus 512 ~~h~w~~~~~~ 522 (588)
|||+....+
T Consensus 273 --~~~~~~~~~ 281 (313)
T cd06633 273 --HDFVRRDRP 281 (313)
T ss_pred --CcccCCCch
Confidence 999986443
No 332
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.1e-36 Score=313.47 Aligned_cols=259 Identities=17% Similarity=0.176 Sum_probs=193.4
Q ss_pred eEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
+.+++.+|.|+++.||++...++.||||++....... .....+.+|+.+++.+ +||||+++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~---------------~~~~~~~~Ei~~l~~l----~h~~i~~~ 64 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSK---------------EDLKLLQQEIITSRQL----QHPNILPY 64 (314)
T ss_pred hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccccch---------------hHHHHHHHHHHHHHhc----CCcchhhh
Confidence 3455666777777888887779999999985421111 0223466789999887 89999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++.+.. ..+++|||+ +|+|.+++... ...+++..+..++.|+++||.|
T Consensus 65 ~~~~~~~~----------------------------~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 116 (314)
T cd08216 65 VTSFIVDS----------------------------ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDY 116 (314)
T ss_pred hheeecCC----------------------------eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 99887632 489999999 58999999864 3468999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc--ccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM--QYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
||+++|+||||||+||+++.+ +.+||+|||.+......... ..........++..|+|||++...... +
T Consensus 117 LH~~~ivH~dlk~~Nili~~~-----~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~----~ 187 (314)
T cd08216 117 IHSKGFIHRSVKASHILLSGD-----GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQG----Y 187 (314)
T ss_pred HHHCCeecCCCCcceEEEecC-----CceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCC----C
Confidence 999999999999999999987 78999999998764331110 011111234578899999999754322 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccc------------c------------------------ccccCCCCCCc
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------------E------------------------VNALPQLNTNV 477 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------------~------------------------~~~~~~~~~~~ 477 (588)
+.++|||||||++|||++|..||......... . ..........+
T Consensus 188 ~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (314)
T cd08216 188 NEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTF 267 (314)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHH
Confidence 47899999999999999999999752110000 0 00000111234
Q ss_pred cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCC
Q psy4039 478 PEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGAT 521 (588)
Q Consensus 478 ~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~ 521 (588)
+.++.+++.+||+.||++|||++++++ |||++...
T Consensus 268 ~~~~~~li~~~l~~~P~~Rpt~~~ll~---------~p~~~~~~ 302 (314)
T cd08216 268 SEHFHQFVELCLQRDPESRPSASQLLN---------HSFFKQCK 302 (314)
T ss_pred HHHHHHHHHHHhhcCCCcCcCHHHHhc---------CchHhhhc
Confidence 567899999999999999999999999 99998443
No 333
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-36 Score=308.74 Aligned_cols=252 Identities=24% Similarity=0.286 Sum_probs=195.7
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||.|+||.||+|.+. +..||||.+.... .. ......+.+|+.+++.+ +||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~--------------~~~~~~~~~e~~~l~~l----~~~~i~ 61 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EK--------------EGFPITAIREIKLLQKL----RHPNIV 61 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-cc--------------ccchHHHHHHHHHHHhc----cCCCee
Confidence 678899999999999999987 6899999996422 00 01123456788999887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++++.+.. ....++||||++++|.+++......+++..++.++.|+++||+|
T Consensus 62 ~~~~~~~~~~--------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 115 (287)
T cd07840 62 RLKEIVTSKG--------------------------KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQY 115 (287)
T ss_pred eheeeEecCC--------------------------CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999987631 12499999999889999987764589999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+.|++|+||||+||+++++ +.++|+|||++........... ....++..|+|||.+.+... ++.
T Consensus 116 LH~~~~~h~dl~p~nil~~~~-----~~~~l~d~g~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~-----~~~ 181 (287)
T cd07840 116 LHSNGILHRDIKGSNILINND-----GVLKLADFGLARPYTKRNSADY----TNRVITLWYRPPELLLGATR-----YGP 181 (287)
T ss_pred HHHCCceeccCcHHHeEEcCC-----CCEEEccccceeeccCCCcccc----cccccccccCCceeeEcccc-----CCh
Confidence 999999999999999999987 8999999999987654321111 13457889999998764321 357
Q ss_pred cCchhhHHHHHHHHhcCCCCCcccccccccc----------cccc-----------------------CCCCCCccHHHH
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----------VNAL-----------------------PQLNTNVPEVMR 482 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----------~~~~-----------------------~~~~~~~~~~l~ 482 (588)
++||||||+++|||++|..||.......... ...+ ..+...+++++.
T Consensus 182 ~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (287)
T cd07840 182 EVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSAL 261 (287)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHH
Confidence 8999999999999999999996532110000 0000 001112388899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+++.+||..||.+||++++++. |||+
T Consensus 262 ~~i~~~l~~~P~~Rp~~~~~l~---------~~~~ 287 (287)
T cd07840 262 DLLDKLLTLDPKKRISADQALQ---------HEYF 287 (287)
T ss_pred HHHHHHcCCChhhCcCHHHHhh---------CcCC
Confidence 9999999999999999999999 9996
No 334
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.3e-37 Score=309.87 Aligned_cols=242 Identities=18% Similarity=0.192 Sum_probs=182.8
Q ss_pred eeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 202 KFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+.||+|+||.||+|.+. ..+||+|.+.... ....+.+.+|+.+++.+ .||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-----------------~~~~~~~~~e~~~l~~~----~h~ 59 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-----------------RNYSESFFEAASMMSQL----SHK 59 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-----------------HHHHHHHHHHHHHHHhC----CCC
Confidence 46999999999999875 2347888763210 00123455678888876 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.+.. ..++||||+ +|+|.+++..+...+++..+..++.||+.
T Consensus 60 ~iv~~~~~~~~~~----------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (258)
T cd05078 60 HLVLNYGVCVCGD----------------------------ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAW 111 (258)
T ss_pred ChhheeeEEEeCC----------------------------CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 9999999987632 378999999 57999999876557899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCC---CCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDN---TCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~---~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
||.|||++||+||||||+|||++.+... ..+.++++|||++...... ....|++.|+|||++.+...
T Consensus 112 ~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~- 181 (258)
T cd05078 112 ALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---------EILLERIPWVPPECIENPQN- 181 (258)
T ss_pred HHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc---------hhccccCCccCchhccCCCC-
Confidence 9999999999999999999999876321 1234799999988654321 13458889999999865321
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCC-CCCccccccccc-cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHD-NPFYQSARNTDY-EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~-~Pf~~~~~~~~~-~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+.++|||||||++|||++|. .||......... .......++...+.++.+++.+||+.||++|||++++++.|
T Consensus 182 ----~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 182 ----LSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred ----CCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 346799999999999999995 555432111111 11123345566778999999999999999999999988743
No 335
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.7e-36 Score=302.93 Aligned_cols=244 Identities=21% Similarity=0.266 Sum_probs=191.0
Q ss_pred eeecccCceeEEEEEEC---C--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 202 KFIAKGTNAVVYEATFR---G--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~---g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
+.||+|++|.||+|.+. + ..||||.+...... ...+.+.+|+.+++.+ +||||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~iv~ 60 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS----------------DIMDDFLKEAAIMHSL----DHENLIR 60 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH----------------HHHHHHHHHHHHHhhc----CCCCccc
Confidence 46899999999999885 2 36999998542211 1234456788888887 8999999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++.+.+ . ..+++|||+ +++|.+++.... ..+++..++.++.|++.||+
T Consensus 61 ~~~~~~~-~----------------------------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~ 111 (257)
T cd05040 61 LYGVVLT-H----------------------------PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMR 111 (257)
T ss_pred eeEEEcC-C----------------------------eEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHH
Confidence 9988764 1 389999999 689999998764 46899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+++++||||||+||+++.+ +.+||+|||+++........ +. ......++..|+|||++.+.. .+
T Consensus 112 ~lH~~~i~H~di~p~nil~~~~-----~~~kl~dfg~~~~~~~~~~~-~~-~~~~~~~~~~y~~pE~~~~~~------~~ 178 (257)
T cd05040 112 YLESKRFIHRDLAARNILLASD-----DKVKIGDFGLMRALPQNEDH-YV-MEEHLKVPFAWCAPESLRTRT------FS 178 (257)
T ss_pred HHHhCCccccccCcccEEEecC-----CEEEeccccccccccccccc-ee-cccCCCCCceecCHHHhcccC------cC
Confidence 9999999999999999999988 79999999999876542211 11 111345788999999987654 45
Q ss_pred CcCchhhHHHHHHHHhc-CCCCCccccccccc----cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 435 SKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY----EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 435 ~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.++|||||||++|||++ |..||......... ........+..+|..+.+++.+||+.+|++||++.++++.|.
T Consensus 179 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 179 HASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred chhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 68999999999999998 99999653211111 111222344567899999999999999999999999988553
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.2e-36 Score=308.22 Aligned_cols=260 Identities=23% Similarity=0.361 Sum_probs=199.4
Q ss_pred CeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+|++.+.||+|+||.||++... +..||||++....... .......+.+|+.++..+ ..|
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~-------------~~~~~~~~~~E~~~l~~~---~~~ 64 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ-------------KAKTAEHTRTERQVLEAV---RRC 64 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh-------------hhhHHHHHHHHHHHHHhc---cCC
Confidence 4788999999999999999864 5789999985311100 001223456788888877 469
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
|||+++++++... ...++||||+ +++|.+++.... .+++..+..++.|++
T Consensus 65 ~~i~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~ 115 (288)
T cd05583 65 PFLVTLHYAFQTD----------------------------TKLHLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIV 115 (288)
T ss_pred cchhhhheeeecC----------------------------CEEEEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHH
Confidence 9999999887652 1489999999 579999987653 789999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||+.+++||||||+||+++.+ +.++|+|||+++........ ......|++.|+|||.+.+....
T Consensus 116 ~~l~~lH~~~~~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~-- 184 (288)
T cd05583 116 LALDHLHQLGIIYRDIKLENILLDSE-----GHVVLTDFGLSKEFLAEEEE----RAYSFCGTIEYMAPEVIRGGSGG-- 184 (288)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC-----CCEEEEECcccccccccccc----ccccccCCccccCHHHhcCCCCC--
Confidence 99999999999999999999999987 78999999998765432111 11134689999999998654321
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++||||||+++|||++|..||........ ......+..+..++.++++++.+||+.||++|||+.++..
T Consensus 185 --~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~ 262 (288)
T cd05583 185 --HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADE 262 (288)
T ss_pred --CcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHH
Confidence 34679999999999999999999964211100 1112234556678899999999999999999999877766
Q ss_pred HHhhhhhcCCccccCC
Q psy4039 505 VCQLYLWAPKHWLYGA 520 (588)
Q Consensus 505 ~L~~~~~~~h~w~~~~ 520 (588)
.|. |||++..
T Consensus 263 ~l~------~~~~~~~ 272 (288)
T cd05583 263 IKN------HPFFQGI 272 (288)
T ss_pred Hhc------CcccccC
Confidence 666 9998643
No 337
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.3e-36 Score=305.51 Aligned_cols=249 Identities=25% Similarity=0.315 Sum_probs=189.8
Q ss_pred eeecccCceeEEEEEECC--------eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 202 KFIAKGTNAVVYEATFRG--------VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~g--------~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.||+|+||.||+|++.. ..||||.+...... .....+.+|+.+++.+ +|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~l~~l----~h~~ 60 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD----------------QEKKEFLKEAHLMSNF----NHPN 60 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccch----------------hhHHHHHHHHHHHHhc----CCCC
Confidence 369999999999998862 57999987432100 1123456788888887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh------cCCCCHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER------CAQLSMHERVLLF 346 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~------~~~l~~~~~~~i~ 346 (588)
|+++++++.+.. ..+++|||+ +++|.+++... ...+++.++..++
T Consensus 61 i~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 112 (269)
T cd05044 61 IVKLLGVCLLNE----------------------------PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDIC 112 (269)
T ss_pred eeeEeeeecCCC----------------------------CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHH
Confidence 999999887532 389999999 68999999753 1247899999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||.|||+.+++|+||||+||+++.+..+....++|+|||+++......... ......++..|+|||++.+..
T Consensus 113 ~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~ 189 (269)
T cd05044 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR---KEGEGLLPVRWMAPESLLDGK 189 (269)
T ss_pred HHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccc---cCcccCCCccccCHHHHccCC
Confidence 99999999999999999999999999997732222489999999997654321111 111234678999999997654
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|||||||++|||++ |..||......... ........+..+|+.+.+++.+||..+|.+||+++++
T Consensus 190 ------~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 263 (269)
T cd05044 190 ------FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRI 263 (269)
T ss_pred ------cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHH
Confidence 4578999999999999998 99998653211111 1122334556789999999999999999999999999
Q ss_pred HHHHh
Q psy4039 503 ATVCQ 507 (588)
Q Consensus 503 l~~L~ 507 (588)
++.|+
T Consensus 264 ~~~l~ 268 (269)
T cd05044 264 QEILQ 268 (269)
T ss_pred HHHHh
Confidence 88765
No 338
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.3e-36 Score=317.48 Aligned_cols=259 Identities=23% Similarity=0.256 Sum_probs=201.4
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|+||.||+|++. +..||||++..... .....+.+.+|+.+++.+ +||||
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---------------~~~~~~~~~~e~~~l~~l----~~~~i 61 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD---------------DLIDAKRILREIKLLRHL----RHENI 61 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc---------------cchhhhhHHHHHHHHHhc----CCcch
Confidence 5889999999999999999986 78999999853211 011234566789999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
+++++++.+... .....+|++|||++++|.+++.... .+++..+..++.|++.||.
T Consensus 62 ~~~~~~~~~~~~-----------------------~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~ 117 (330)
T cd07834 62 IGLLDILRPPSP-----------------------EDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLK 117 (330)
T ss_pred hhhhhhhcccCc-----------------------ccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHH
Confidence 999998876320 1122489999999889999987654 8999999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+|||++.+ +.++|+|||++......... ........||+.|+|||++.+... .+
T Consensus 118 ~LH~~gi~H~dlkp~nili~~~-----~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~-----~~ 185 (330)
T cd07834 118 YLHSANVIHRDLKPSNILVNSN-----CDLKICDFGLARGVDPDEDE--KGFLTEYVVTRWYRAPELLLSSSR-----YT 185 (330)
T ss_pred HHHhCCeecCCCCHHHEEEcCC-----CCEEEcccCceEeecccccc--cccccccccccCcCCceeeecccC-----CC
Confidence 9999999999999999999988 89999999999876553210 011123468899999999876521 45
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccccc---------------------------------ccccCCCCCCccHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------------------------------VNALPQLNTNVPEVM 481 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~l 481 (588)
.++||||||+++|+|++|.+||.+......+. ..........+++++
T Consensus 186 ~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (330)
T cd07834 186 KAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEA 265 (330)
T ss_pred cchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHH
Confidence 78999999999999999999996532100000 000011123468899
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.++|.+||+.||++||++++++. |||++.
T Consensus 266 ~~li~~~l~~~P~~Rpt~~~ll~---------~~~~~~ 294 (330)
T cd07834 266 IDLLEKMLVFDPKKRITADEALA---------HPYLAQ 294 (330)
T ss_pred HHHHHHHccCChhhCCCHHHHHh---------CccHHh
Confidence 99999999999999999999998 999973
No 339
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.5e-36 Score=304.04 Aligned_cols=256 Identities=22% Similarity=0.250 Sum_probs=192.3
Q ss_pred eEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
|.+.+.||+|+||.||+|.+. +..||||++....... ...+.+.+|+.+++.+ +||
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~---------------~~~~~~~~E~~~l~~l----~h~ 61 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS---------------SDIEEFLREAACMKEF----DHP 61 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh---------------HHHHHHHHHHHHHhcC----CCC
Confidence 567889999999999999874 5789999985321110 0123355688888887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-----cCCCCHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-----CAQLSMHERVLLF 346 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-----~~~l~~~~~~~i~ 346 (588)
||+++++++....+ .+.....+++++|+ +|+|.+++... ...+++..+..++
T Consensus 62 ~i~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 119 (273)
T cd05074 62 NVIKLIGVSLRSRA----------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM 119 (273)
T ss_pred CcceEEEEEccCCC----------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 99999998875321 11112367889998 68999887643 1257899999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.|++.||+|||+++|+||||||+||+++.+ +.+||+|||+++....+..... .....+++.|++||.+....
T Consensus 120 ~~i~~~l~~lH~~~i~H~dikp~nili~~~-----~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~pe~~~~~~ 191 (273)
T cd05074 120 IDIASGMEYLSSKNFIHRDLAARNCMLNEN-----MTVCVADFGLSKKIYSGDYYRQ---GCASKLPVKWLALESLADNV 191 (273)
T ss_pred HHHHHHHHHHHhCCEeecccchhhEEEcCC-----CCEEECcccccccccCCcceec---CCCccCchhhcCHhHHhcCc
Confidence 999999999999999999999999999877 7899999999986543221111 11234567899999987654
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc---ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE---VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
.+.++|||||||++|||++ |.+||.+........ .......+..+++.+.+++.+||+.+|++|||+.++
T Consensus 192 ------~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~ 265 (273)
T cd05074 192 ------YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHL 265 (273)
T ss_pred ------cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 3468999999999999999 889986543221111 111223345678899999999999999999999999
Q ss_pred HHHHhh
Q psy4039 503 ATVCQL 508 (588)
Q Consensus 503 l~~L~~ 508 (588)
+..|+.
T Consensus 266 ~~~l~~ 271 (273)
T cd05074 266 RDQLEL 271 (273)
T ss_pred HHHHHh
Confidence 987763
No 340
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=5e-36 Score=310.63 Aligned_cols=257 Identities=23% Similarity=0.288 Sum_probs=200.2
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|+..+.||+|+||.||+|++. +..||||.+......... ....+.+|+.+++.+ +|||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------------~~~~~~~e~~~l~~l----~h~~ 76 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------------KWQDIIKEVRFLQKL----RHPN 76 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChH--------------HHHHHHHHHHHHHhC----CCCC
Confidence 44777888999999999999986 788999998532111110 122345688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
++++++++.+.. ..++||||+.|+|.+++......+++.++..++.|++.||
T Consensus 77 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l 128 (308)
T cd06634 77 TIQYRGCYLREH----------------------------TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 128 (308)
T ss_pred cccEEEEEEcCC----------------------------eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 999999987632 4899999998899888876555799999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++++||||||+||+++.+ +.++|+|||++...... ....|++.|+|||++.+.... ..
T Consensus 129 ~~LH~~~i~H~dl~p~nil~~~~-----~~~kl~dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~---~~ 191 (308)
T cd06634 129 AYLHSHNMIHRDVKAGNILLSEP-----GLVKLGDFGSASIMAPA---------NXFVGTPYWMAPEVILAMDEG---QY 191 (308)
T ss_pred HHHHhCCcccCCCCHHhEEECCC-----CcEEECCcccceeecCc---------ccccCCccccCHHHHhhcccC---CC
Confidence 99999999999999999999887 78999999998664321 134688999999998542110 13
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCC-CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQ-LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~-~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.++|||||||++|||++|..||........ ......+. ....++..+.++|.+||+.+|++||+++++++
T Consensus 192 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~----- 266 (308)
T cd06634 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK----- 266 (308)
T ss_pred CcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhh-----
Confidence 4689999999999999999999866321111 11111122 23467889999999999999999999999999
Q ss_pred hhcCCccccCCCCCh
Q psy4039 510 LWAPKHWLYGATPSH 524 (588)
Q Consensus 510 ~~~~h~w~~~~~~~~ 524 (588)
|+|+....+..
T Consensus 267 ----~~~~~~~~~~~ 277 (308)
T cd06634 267 ----HRFVLRERPPT 277 (308)
T ss_pred ----CccccccCChh
Confidence 99998655544
No 341
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-35 Score=296.67 Aligned_cols=252 Identities=23% Similarity=0.295 Sum_probs=203.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|...+.||+|++|.||+|.+. +..|++|++...... ....+.+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---------------~~~~~~~~~e~~~l~~l----~~~~i 61 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---------------EEELEALEREIRILSSL----QHPNI 61 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc---------------hHHHHHHHHHHHHHHHc----CCCCE
Confidence 4788899999999999999997 889999998532211 01234456788999887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ....+++||++ +++|.+++.... .+++.+++.++.|++.||
T Consensus 62 ~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l 114 (260)
T cd06606 62 VRYYGSERDEE--------------------------KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGL 114 (260)
T ss_pred eeEEEEEecCC--------------------------CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHH
Confidence 99999887631 12589999999 689999998765 899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+++|+||+|+||+++.+ +.++|+|||.+.......... ......++..|+|||.+.+.. .
T Consensus 115 ~~lh~~~~~h~dl~p~ni~i~~~-----~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~~y~~pE~~~~~~------~ 180 (260)
T cd06606 115 AYLHSNGIVHRDIKGANILVDSD-----GVVKLADFGCAKRLGDIETGE---GTGSVRGTPYWMAPEVIRGEE------Y 180 (260)
T ss_pred HHHHHCCccccCCCHHHEEEcCC-----CCEEEcccccEEecccccccc---cccCCCCCccccCHhhhcCCC------C
Confidence 99999999999999999999987 789999999998765532210 011356889999999987654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccc--ccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARN--TDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~--~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
..++||||||+++|+|++|..||...... ... .....+.++..++..+++++.+||+.||++||++.++++
T Consensus 181 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~---- 256 (260)
T cd06606 181 GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ---- 256 (260)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh----
Confidence 46899999999999999999999764311 001 112344566778999999999999999999999999999
Q ss_pred hhhcCCccc
Q psy4039 509 YLWAPKHWL 517 (588)
Q Consensus 509 ~~~~~h~w~ 517 (588)
|||+
T Consensus 257 -----~~~~ 260 (260)
T cd06606 257 -----HPFL 260 (260)
T ss_pred -----CCCC
Confidence 9996
No 342
>KOG0669|consensus
Probab=100.00 E-value=2.8e-38 Score=301.95 Aligned_cols=286 Identities=20% Similarity=0.267 Sum_probs=214.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|+...+||+|.||.||+|+.+ |+.||+|++.- +-.+|..+ ....+|+++|..+ +|+|
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlm------------eneKeGfp---italreikiL~~l----kHen 77 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLM------------ENEKEGFP---ITALREIKILQLL----KHEN 77 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHH------------hccccCCc---HHHHHHHHHHHHh----cchh
Confidence 66888889999999999999987 77899987521 00122211 2235799999987 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
++.+++.|..... |. .+...++|+||++|..+|..+|.+...+++..++.+++.+++.||
T Consensus 78 v~nliEic~tk~T------------------p~--~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL 137 (376)
T KOG0669|consen 78 VVNLIEICRTKAT------------------PT--NRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGL 137 (376)
T ss_pred HHHHHHHHhhccC------------------Cc--ccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHH
Confidence 9999999987531 11 123446999999999999999998767899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|+|+..|+|||+||+|+||+.+ +.+||+|||+|+.+....... ....+..+-|..|.+||.+.+... +
T Consensus 138 ~~iHr~kilHRDmKaaNvLIt~d-----gilklADFGlar~fs~~~n~~-kprytnrvvTLwYrppEllLG~r~-----y 206 (376)
T KOG0669|consen 138 YYIHRNKILHRDMKAANVLITKD-----GILKLADFGLARAFSTSKNVV-KPRYTNRVVTLWYRPPELLLGDRE-----Y 206 (376)
T ss_pred HHHHHhhHHhhcccHhhEEEcCC-----ceEEeeccccccceecccccC-CCCcccceeeeecCCHHHhhcccc-----c
Confidence 99999999999999999999998 899999999998765422211 111224567999999999998763 6
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc----------cccccc--------------CCCCC-------------C
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----------YEVNAL--------------PQLNT-------------N 476 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----------~~~~~~--------------~~~~~-------------~ 476 (588)
+++.|||+.|||+.||++|.+-+.+...... +....| ++++. .
T Consensus 207 g~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~ 286 (376)
T KOG0669|consen 207 GPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYV 286 (376)
T ss_pred CCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhccccc
Confidence 6789999999999999999988876321111 001111 11211 1
Q ss_pred ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCCChhHHHHHHHhhhccccc
Q psy4039 477 VPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATPSHNEIMQWLLTLTTKVLC 540 (588)
Q Consensus 477 ~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~~~~~~~~~l~~~~~~~~~ 540 (588)
-.+++.+|+.++|..||.+|++++++++ |.||......-..+.+.+.+....++.
T Consensus 287 kd~~a~dLle~ll~~DP~kR~~ad~aln---------h~~F~kdp~pqanl~~ml~t~~~s~fe 341 (376)
T KOG0669|consen 287 KDDEALDLLEKLLKLDPTKRIDADQALN---------HDFFWKDPMPQANLQDMLSTHLQSMFE 341 (376)
T ss_pred CChhHHHHHHHHhccCcccCcchHhhhc---------hhhhhcCCcchhhHHHHHHHhHHHHHH
Confidence 1347889999999999999999999999 999874443334555555554444433
No 343
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.5e-36 Score=315.20 Aligned_cols=269 Identities=19% Similarity=0.204 Sum_probs=198.1
Q ss_pred CCeE-EeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 196 DDIQ-IGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 196 ~~~~-~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
++|. +.+.||.|+||+||+|.+. ++.||||.+.......... ..+....+. .....+.+|+.+++.+ +||
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~E~~~l~~l----~h~ 80 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVT-KDRQLVGMC--GIHFTTLRELKIMNEI----KHE 80 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccc-cchhhhccc--ccchhHHHHHHHHHhC----CCc
Confidence 5565 4678999999999999976 7899999986432221100 000000000 0122456799999887 899
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++++.... ..+++|||+.|+|.+++.... .+++.....++.|++.|
T Consensus 81 ~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~ql~~a 131 (335)
T PTZ00024 81 NIMGLVDVYVEGD----------------------------FINLVMDIMASDLKKVVDRKI-RLTESQVKCILLQILNG 131 (335)
T ss_pred ceeeeeEEEecCC----------------------------cEEEEEeccccCHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 9999999987532 489999999999999997654 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc---------ccccccccccCCccccchhHHh
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM---------QYSSADIELGGNVALMAPEVAL 423 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~---------~~~~~~~~~~GT~~Y~APE~l~ 423 (588)
|.|||+.||+||||||+||+++.+ +.++|+|||+++........ ..........+++.|+|||++.
T Consensus 132 L~~LH~~~i~H~dl~~~nill~~~-----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 132 LNVLHKWYFMHRDLSPANIFINSK-----GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHhCCeecccccHHHeEECCC-----CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcc
Confidence 999999999999999999999987 78999999999865421100 0011112345788999999986
Q ss_pred cCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc---------------ccc---------------cccCCC
Q psy4039 424 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---------------YEV---------------NALPQL 473 (588)
Q Consensus 424 ~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---------------~~~---------------~~~~~~ 473 (588)
+... .+.++|||||||++|||++|.+||........ +.. ......
T Consensus 207 ~~~~-----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (335)
T PTZ00024 207 GAEK-----YHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTI 281 (335)
T ss_pred cCCC-----CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHh
Confidence 5431 34689999999999999999999965321100 000 000011
Q ss_pred CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 474 NTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 474 ~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
...++.++.++|.+||+.||++|||+++++. |||++.
T Consensus 282 ~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~---------~~~~~~ 318 (335)
T PTZ00024 282 FPNASDDAIDLLQSLLKLNPLERISAKEALK---------HEYFKS 318 (335)
T ss_pred CcCCChHHHHHHHHHcCCCchhccCHHHHhc---------CcccCC
Confidence 2345788999999999999999999999998 999983
No 344
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.5e-36 Score=306.21 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=201.8
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|.+.+.||+|+||.||+|... +..||+|++........ .....+.+|..+++.+ .+|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~--------------~~~~~~~~e~~~~~~l---~~~~~ 63 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE--------------KKVKYVKIEKEVLTRL---NGHPG 63 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccch--------------HHHHHHHHHHHHHHhc---ccCCC
Confidence 47899999999999999999986 88999999843211100 0123456688888877 23999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.+.. ..+++||++ +++|.+++...+ .+++..+..++.|++.|
T Consensus 64 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~ 114 (280)
T cd05581 64 IIKLYYTFQDEE----------------------------NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLA 114 (280)
T ss_pred chhHHHHhcCCc----------------------------eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHH
Confidence 999999886532 489999999 789999998765 79999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccc---------------cccccccccCCcccc
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQ---------------YSSADIELGGNVALM 417 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~---------------~~~~~~~~~GT~~Y~ 417 (588)
|.|||+.|++|+||||+||+++.+ +.++|+|||++.......... .........|+..|+
T Consensus 115 l~~Lh~~~~~H~dl~~~ni~i~~~-----~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (280)
T cd05581 115 LEYLHSKGIIHRDLKPENILLDKD-----MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYV 189 (280)
T ss_pred HHHHHHCCeeecCCCHHHeEECCC-----CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCcccc
Confidence 999999999999999999999987 789999999998754422100 001122456889999
Q ss_pred chhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 418 APEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 418 APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
|||+..... .+.++||||||+++|++++|..||........+.. .....++..+++.+.+++.+||+.||++
T Consensus 190 ~Pe~~~~~~------~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 190 SPELLNEKP------AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred CHHHhCCCC------CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhh
Confidence 999986544 44679999999999999999999976432111111 2223456678999999999999999999
Q ss_pred CCCH----HHHHHHHhhhhhcCCccc
Q psy4039 496 RPSA----ELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 496 Rps~----~e~l~~L~~~~~~~h~w~ 517 (588)
||++ +++++ |||+
T Consensus 264 R~~~~~~~~~ll~---------~~~~ 280 (280)
T cd05581 264 RLGVNEGYDELKA---------HPFF 280 (280)
T ss_pred CCCcccCHHHHhc---------CCCC
Confidence 9999 99998 9996
No 345
>KOG0986|consensus
Probab=100.00 E-value=3.5e-37 Score=315.06 Aligned_cols=256 Identities=24% Similarity=0.360 Sum_probs=208.0
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
+.++.+.|..-++||+||||.||-|..+ |+-||.|.+.+.. ..+. .......+|..||+++
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKR-----------iKkr---~ge~maLnEk~iL~kV--- 242 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKR-----------IKKR---KGETMALNEKQILEKV--- 242 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHH-----------HHHh---hhhHHhhHHHHHHHHh---
Confidence 5566688999999999999999998876 8899999884311 1111 1233456788899988
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhc-CCCCHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERC-AQLSMHERVLLF 346 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~-~~l~~~~~~~i~ 346 (588)
+.|.||.|-..|+..+ .+++||..|| |+|.-+|...+ ..+++..++.++
T Consensus 243 -~s~FiVslaYAfeTkd----------------------------~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYA 293 (591)
T KOG0986|consen 243 -SSPFIVSLAYAFETKD----------------------------ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYA 293 (591)
T ss_pred -ccCcEEEEeeeecCCC----------------------------ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHH
Confidence 8899999988887743 4999999995 79998888753 479999999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.+|+.||++||+.+||.|||||+|||+|+. ++++|+|.|+|..+..+.... ..+||.+|||||++....
T Consensus 294 AEi~cGLehlH~~~iVYRDLKPeNILLDd~-----GhvRISDLGLAvei~~g~~~~------~rvGT~GYMAPEvl~ne~ 362 (591)
T KOG0986|consen 294 AEIICGLEHLHRRRIVYRDLKPENILLDDH-----GHVRISDLGLAVEIPEGKPIR------GRVGTVGYMAPEVLQNEV 362 (591)
T ss_pred HHHHhhHHHHHhcceeeccCChhheeeccC-----CCeEeeccceEEecCCCCccc------cccCcccccCHHHHcCCc
Confidence 999999999999999999999999999998 999999999998887754331 358999999999998877
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC--
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS-- 498 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps-- 498 (588)
+ +...|+||+||++|||+.|+.||...-..... .......+++.++++++++.+.+|++||.+|..
T Consensus 363 Y------~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 363 Y------DFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred c------cCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 3 45699999999999999999999763211111 122333567889999999999999999999974
Q ss_pred ---HHHHHHHHhhhhhcCCcccc
Q psy4039 499 ---AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 499 ---~~e~l~~L~~~~~~~h~w~~ 518 (588)
++++.+ ||+|+
T Consensus 437 g~ga~evk~---------HpfFk 450 (591)
T KOG0986|consen 437 GEGAQEVKE---------HPFFK 450 (591)
T ss_pred CcCcchhhh---------Ccccc
Confidence 567766 88877
No 346
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.8e-36 Score=305.07 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=197.4
Q ss_pred CCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
++|++.+.||+|+||.||+|.+. +..||||.+...... .....+.+|+.+++.+
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~----------------~~~~~~~~ei~~l~~l---- 63 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE----------------QHRSDFEREIEILRTL---- 63 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch----------------HHHHHHHHHHHHHHhC----
Confidence 67888899999999999999875 678999998532110 0234567788888887
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
.||||+++++++.+.. ....+++|||+ +++|.+++......+++..+..++.|
T Consensus 64 ~~~~i~~~~~~~~~~~--------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 117 (284)
T cd05038 64 DHENIVKYKGVCEKPG--------------------------GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQ 117 (284)
T ss_pred CCCChheEEeeeecCC--------------------------CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHH
Confidence 8999999999876521 12489999999 57999999877556999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++.||.|||++||+||||||+||+++.+ +.++|+|||++.......... .......++..|+|||.+.+..
T Consensus 118 l~~aL~~lH~~~i~H~dl~p~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~-- 188 (284)
T cd05038 118 ICKGMDYLGSQRYIHRDLAARNILVESE-----DLVKISDFGLAKVLPEDKDYY--YVKEPGESPIFWYAPECLRTSK-- 188 (284)
T ss_pred HHHHHHHHHhCCeecCCCCHHhEEEcCC-----CCEEEcccccccccccCCcce--eccCCCCCcccccCcHHHccCC--
Confidence 9999999999999999999999999987 789999999998765322211 0111234566799999986554
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc------------------ccccccCCCCCCccHHHHHHHHHhhh
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD------------------YEVNALPQLNTNVPEVMRRLVAKLLE 490 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~Li~~~L~ 490 (588)
.+.++|||||||++|||++|..|+........ .......+.+..++.++.+++.+||+
T Consensus 189 ----~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 264 (284)
T cd05038 189 ----FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWE 264 (284)
T ss_pred ----CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhc
Confidence 44679999999999999999999865321110 00111223345678899999999999
Q ss_pred hCCCCCCCHHHHHHHHh
Q psy4039 491 NDPSDRPSAELAATVCQ 507 (588)
Q Consensus 491 ~dP~~Rps~~e~l~~L~ 507 (588)
.||++|||+.++++.|+
T Consensus 265 ~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 265 AEPQDRPSFADLILIVD 281 (284)
T ss_pred cChhhCCCHHHHHHHHh
Confidence 99999999999998776
No 347
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=7.2e-36 Score=298.26 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=201.7
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||.|+||.||++.+. +..||+|.+....... .....+.+|+++++.+ +|||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~~ 61 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE---------------KEREDALNEVKILKKL----NHPNI 61 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh---------------HHHHHHHHHHHHHHhc----CCCCh
Confidence 5888999999999999999997 8899999985322110 1223355688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRER---CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~---~~~l~~~~~~~i~~ql~ 350 (588)
+++++.+.+. ...+++||+++ ++|.+++... ...+++.++..++.+++
T Consensus 62 ~~~~~~~~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 113 (258)
T cd08215 62 IKYYESFEEK----------------------------GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113 (258)
T ss_pred hheEEEEecC----------------------------CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHH
Confidence 9999988752 24899999994 6999999875 35899999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||++|++|+||+|+||+++.+ +.++|+|||++........ ......|++.|+|||.+.+..
T Consensus 114 ~~l~~lh~~~~~H~dl~~~nil~~~~-----~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~---- 179 (258)
T cd08215 114 LALKYLHSRKILHRDIKPQNIFLTSN-----GLVKLGDFGISKVLSSTVD-----LAKTVVGTPYYLSPELCQNKP---- 179 (258)
T ss_pred HHHHHHHhCCEecccCChHHeEEcCC-----CcEEECCccceeecccCcc-----eecceeeeecccChhHhccCC----
Confidence 99999999999999999999999987 7899999999977654321 112356899999999987654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++||||+|+++|+|++|..||........ ......+.++..++.++.+++.+||..+|++|||+.++++
T Consensus 180 --~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~--- 254 (258)
T cd08215 180 --YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ--- 254 (258)
T ss_pred --CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc---
Confidence 44679999999999999999999966421111 1122344566688999999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 255 ------~~~~ 258 (258)
T cd08215 255 ------SPFI 258 (258)
T ss_pred ------CCCC
Confidence 9996
No 348
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1e-35 Score=297.09 Aligned_cols=248 Identities=23% Similarity=0.352 Sum_probs=200.9
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|++|.||++.+. ++.||||.+....... .....+.+|++++.++ +|||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i 61 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE---------------EALKSIMQEIDLLKNL----KHPNI 61 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH---------------HHHHHHHHHHHHHHhC----CCCCc
Confidence 4788999999999999999886 6899999985432110 0223456788888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..+++||++ +++|.+++.... .+++..+..++.|++.||
T Consensus 62 ~~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~~l 112 (254)
T cd06627 62 VKYIGSIETSD----------------------------SLYIILEYAENGSLRQIIKKFG-PFPESLVAVYVYQVLQGL 112 (254)
T ss_pred cEEEEEEEeCC----------------------------EEEEEEecCCCCcHHHHHHhcc-CCCHHHHHHHHHHHHHHH
Confidence 99999887631 489999999 569999997653 899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||+++.+ +.++|+|||++......... .....|+..|+|||...+.. .
T Consensus 113 ~~lH~~~i~H~dl~p~ni~i~~~-----~~~~l~d~~~~~~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~------~ 176 (254)
T cd06627 113 AYLHEQGVIHRDIKAANILTTKD-----GVVKLADFGVATKLNDVSKD-----DASVVGTPYWMAPEVIEMSG------A 176 (254)
T ss_pred HHHhhCCcccCCCCHHHEEECCC-----CCEEEeccccceecCCCccc-----ccccccchhhcCHhhhcCCC------C
Confidence 99999999999999999999986 78999999999876543221 12356889999999986543 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYL 510 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~ 510 (588)
..++||||+|+++|+|++|..||....... .......+.++..+++.+.+++.+||+.+|++|||+.+++.
T Consensus 177 ~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~------ 250 (254)
T cd06627 177 STASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK------ 250 (254)
T ss_pred CcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc------
Confidence 467999999999999999999997532111 11123344566788999999999999999999999999998
Q ss_pred hcCCccc
Q psy4039 511 WAPKHWL 517 (588)
Q Consensus 511 ~~~h~w~ 517 (588)
|||+
T Consensus 251 ---~~~~ 254 (254)
T cd06627 251 ---HPWI 254 (254)
T ss_pred ---CCCC
Confidence 9996
No 349
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.7e-36 Score=304.51 Aligned_cols=250 Identities=20% Similarity=0.260 Sum_probs=193.3
Q ss_pred cCCeEEeeeecccCceeEEEEEEC-------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR-------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~-------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
.++|++...||+|+||.||+|+.+ ...||+|.+.... . .. ....+.+|+.+++.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~-~~------------~~~~~~~E~~~l~~l-- 65 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK---D-EN------------LQSEFRRELDMFRKL-- 65 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc---c-hH------------HHHHHHHHHHHHHhc--
Confidence 378999999999999999999975 4679999874211 0 00 123456688999887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--------CCCC
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC--------AQLS 338 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~--------~~l~ 338 (588)
+||||+++++++.+.. ..++||||+ +|+|.+++.... ..++
T Consensus 66 --~h~~iv~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~ 115 (275)
T cd05046 66 --SHKNVVRLLGLCREAE----------------------------PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLS 115 (275)
T ss_pred --CCcceeeeEEEECCCC----------------------------cceEEEEecCCCcHHHHHHhcccccccccccCCC
Confidence 8999999999887632 389999999 589999998653 1589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccc
Q psy4039 339 MHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMA 418 (588)
Q Consensus 339 ~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~A 418 (588)
+..+..++.|++.||.|||+++|+||||||+||+++.+ +.++|+|||+++........ ......++..|+|
T Consensus 116 ~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~-----~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~y~~ 186 (275)
T cd05046 116 TKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ-----REVKVSLLSLSKDVYNSEYY----KLRNALIPLRWLA 186 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC-----CcEEEcccccccccCccccc----ccCCceeEEeecC
Confidence 99999999999999999999999999999999999987 78999999998754321111 1113356778999
Q ss_pred hhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccccc----cccCCCCCCccHHHHHHHHHhhhhCC
Q psy4039 419 PEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYEV----NALPQLNTNVPEVMRRLVAKLLENDP 493 (588)
Q Consensus 419 PE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~l~~Li~~~L~~dP 493 (588)
||.+.+.. ...++|||||||++|+|++ |..||........... ......+..+|..+.+++.+||+.||
T Consensus 187 PE~~~~~~------~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p 260 (275)
T cd05046 187 PEAVQEDD------FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNP 260 (275)
T ss_pred hhhhccCC------CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCc
Confidence 99987554 3467999999999999998 7889865322111110 11122345788999999999999999
Q ss_pred CCCCCHHHHHHHHh
Q psy4039 494 SDRPSAELAATVCQ 507 (588)
Q Consensus 494 ~~Rps~~e~l~~L~ 507 (588)
++|||+.++++.+.
T Consensus 261 ~~Rp~~~~~l~~l~ 274 (275)
T cd05046 261 KDRPSFSELVSALG 274 (275)
T ss_pred ccCCCHHHHHHHhc
Confidence 99999999988553
No 350
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.2e-35 Score=295.02 Aligned_cols=245 Identities=27% Similarity=0.380 Sum_probs=197.5
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|+..+.||+|++|.||++.+. +..|++|++..... .....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----------------~~~~~~~~e~~~l~~l----~~~~i 59 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----------------EKKEKIINEIQILKKC----KHPNI 59 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-----------------hHHHHHHHHHHHHHhC----CCCCE
Confidence 4788899999999999999997 78999999853211 0223456788888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
+++++++.+.. ..++++||++ ++|.+++......+++..+..++.|+++||
T Consensus 60 ~~~~~~~~~~~----------------------------~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l 111 (253)
T cd05122 60 VKYYGSYLKKD----------------------------ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGL 111 (253)
T ss_pred eEEEEEEecCC----------------------------eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 99999887632 3899999995 899999987645899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||++|++||||+|+||+++.+ +.++|+|||.+........ .....|+..|+|||++.+.. .
T Consensus 112 ~~lh~~~i~h~dl~p~ni~i~~~-----~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~PE~~~~~~------~ 174 (253)
T cd05122 112 EYLHSNGIIHRDIKAANILLTSD-----GEVKLIDFGLSAQLSDTKA------RNTMVGTPYWMAPEVINGKP------Y 174 (253)
T ss_pred HHhhcCCEecCCCCHHHEEEccC-----CeEEEeecccccccccccc------ccceecCCcccCHHHHcCCC------C
Confidence 99999999999999999999987 7899999999977654321 12456889999999987654 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCC--CccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNT--NVPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~--~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
+.++||||||+++|+|++|..||........ ......+..+. .++..+.+++.+||+.||++|||+.+++.
T Consensus 175 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~---- 250 (253)
T cd05122 175 DYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK---- 250 (253)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc----
Confidence 5689999999999999999999976411110 11111222222 24889999999999999999999999998
Q ss_pred hhhcCCcc
Q psy4039 509 YLWAPKHW 516 (588)
Q Consensus 509 ~~~~~h~w 516 (588)
|||
T Consensus 251 -----~~~ 253 (253)
T cd05122 251 -----HPF 253 (253)
T ss_pred -----CCC
Confidence 998
No 351
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.6e-36 Score=312.89 Aligned_cols=248 Identities=22% Similarity=0.283 Sum_probs=194.7
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|++.+.||.|+||.||+|.+. +..||||.+...... ....+.+.+|+.+++.+ +|||
T Consensus 10 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~~~~E~~~l~~l----~hpn 70 (328)
T cd07856 10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST---------------PVLAKRTYRELKLLKHL----RHEN 70 (328)
T ss_pred cceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc---------------cchhHHHHHHHHHHHhc----CCCC
Confidence 78999999999999999999876 789999987431110 01223455688999887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|++++++|.... ...+++|||++++|.+++... .+++..+..++.|+++||
T Consensus 71 iv~~~~~~~~~~---------------------------~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL 121 (328)
T cd07856 71 IISLSDIFISPL---------------------------EDIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGL 121 (328)
T ss_pred eeeEeeeEecCC---------------------------CcEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHH
Confidence 999999886521 138899999998999988754 788999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+++|+||||||+|||++.+ +.++|+|||++....... ....+++.|+|||++.+... .
T Consensus 122 ~~LH~~~iiH~dl~p~Nili~~~-----~~~~l~dfg~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~-----~ 183 (328)
T cd07856 122 KYVHSAGVVHRDLKPSNILINEN-----CDLKICDFGLARIQDPQM--------TGYVSTRYYRAPEIMLTWQK-----Y 183 (328)
T ss_pred HHHHhCCcccCCCCHHHEeECCC-----CCEEeCccccccccCCCc--------CCCcccccccCceeeeccCC-----c
Confidence 99999999999999999999977 789999999987543211 13457889999998754221 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc--------------------------c--cccccC-----CCCCCccHH
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------------------------Y--EVNALP-----QLNTNVPEV 480 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--------------------------~--~~~~~~-----~~~~~~~~~ 480 (588)
+.++|||||||++|+|++|+.||........ + ...... .....++++
T Consensus 184 ~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (328)
T cd07856 184 DVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPS 263 (328)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHH
Confidence 5689999999999999999999965321000 0 000000 111356789
Q ss_pred HHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 481 MRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 481 l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+.++|.+||+.+|++||++++++. |||+.
T Consensus 264 ~~~li~~~l~~~P~~R~t~~ell~---------~~~~~ 292 (328)
T cd07856 264 AIDLLEKMLVFDPQKRISAAEALA---------HPYLA 292 (328)
T ss_pred HHHHHHHHcCCChhhCCCHHHHhc---------CCccc
Confidence 999999999999999999999999 99997
No 352
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.5e-36 Score=305.18 Aligned_cols=249 Identities=26% Similarity=0.336 Sum_probs=196.0
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||.|++|.||+|.+. +..+|+|.+....... .....+.+|+.+++.+ +||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i~ 61 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE---------------GIPKTALREIKLLKEL----NHPNII 61 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc---------------hhHHHHHHHHHHHHHh----cCCCcc
Confidence 566788999999999999986 7899999985322110 1223456688888887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++++.+. ...+++|||+.++|.+++......+++..+..++.|+++||.|
T Consensus 62 ~~~~~~~~~----------------------------~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 113 (283)
T cd05118 62 KLLDVFRHK----------------------------GDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAF 113 (283)
T ss_pred hHHHhhccC----------------------------CCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHH
Confidence 999988763 2489999999889999998765689999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||+++|+|+||||+||+++.+ +.++|+|||.+........ .. ....++..|+|||.+.+... .+.
T Consensus 114 LH~~~i~H~dl~p~nili~~~-----~~~~l~df~~~~~~~~~~~-~~----~~~~~~~~~~~PE~~~~~~~-----~~~ 178 (283)
T cd05118 114 CHSHGILHRDLKPENLLINTE-----GVLKLADFGLARSFGSPVR-PY----THYVVTRWYRAPELLLGDKG-----YST 178 (283)
T ss_pred HHHCCeeecCcCHHHEEECCC-----CcEEEeeeeeeEecCCCcc-cc----cCccCcccccCcHHHhcCCC-----CCc
Confidence 999999999999999999987 7899999999977654321 11 13457889999999876421 457
Q ss_pred cCchhhHHHHHHHHhcCCCCCccccccccc---------------c-----------------ccccCCCCCCccHHHHH
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDY---------------E-----------------VNALPQLNTNVPEVMRR 483 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---------------~-----------------~~~~~~~~~~~~~~l~~ 483 (588)
++||||+|+++|+|++|+.||........+ . ..........++.++.+
T Consensus 179 ~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (283)
T cd05118 179 PVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALD 258 (283)
T ss_pred hhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHH
Confidence 899999999999999999999653210000 0 00001122357889999
Q ss_pred HHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 484 LVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 484 Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+|.+||+.||.+||++++++. |||+
T Consensus 259 ~i~~~l~~~P~~Rp~~~~ll~---------~~~~ 283 (283)
T cd05118 259 LLSQMLHYDPHKRITAEQALA---------HPYF 283 (283)
T ss_pred HHHHHhccCcccCcCHHHHhh---------CCCC
Confidence 999999999999999999999 9996
No 353
>KOG0584|consensus
Probab=100.00 E-value=5e-37 Score=326.09 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=197.7
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
.+...+||+|+|-+||+|.+. |.+||--.++. +.+.+. +...+++..|+.+|+.| +|||||
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~-----------~d~~q~--~~~leR~~~Ev~lLKsL----~H~NIi 104 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKI-----------RDVTQS--PEELERLYSEVHLLKSL----KHPNII 104 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhH-----------HHhhcC--hHHHHHHHHHHHHHccC----CCCcee
Confidence 355679999999999999987 65666433211 111111 11236778899999997 999999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++|+++.+.. +.++.+|+|.+ .|+|..|+++.+ .++.+....|++||++||.
T Consensus 105 rfy~SW~d~~--------------------------n~~in~iTEL~TSGtLr~Y~kk~~-~vn~kaik~W~RQILkGL~ 157 (632)
T KOG0584|consen 105 RFYDSWVDTD--------------------------NKTINFITELFTSGTLREYRKKHR-RVNIKAIKSWCRQILKGLV 157 (632)
T ss_pred eeeeheecCC--------------------------CceeeeeeecccCCcHHHHHHHhc-cCCHHHHHHHHHHHHHHhh
Confidence 9999998742 34689999999 799999999876 8999999999999999999
Q ss_pred HHHhC--CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 355 HLNMH--RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 355 yLH~~--~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|||++ .|||||||.+||+|+.+. |.+||+|+|+|...... ......|||.|||||+....
T Consensus 158 yLHs~~PPIIHRDLKCDNIFinG~~----G~VKIGDLGLAtl~r~s-------~aksvIGTPEFMAPEmYEE~------- 219 (632)
T KOG0584|consen 158 YLHSQDPPIIHRDLKCDNIFVNGNL----GEVKIGDLGLATLLRKS-------HAKSVIGTPEFMAPEMYEEN------- 219 (632)
T ss_pred hhhcCCCCccccccccceEEEcCCc----CceeecchhHHHHhhcc-------ccceeccCccccChHHHhhh-------
Confidence 99987 799999999999998764 89999999999875432 12247899999999998743
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccc-ccccccc---ccC-CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSAR-NTDYEVN---ALP-QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~-~~~~~~~---~~~-~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|++.+||||||.+++||+|+..||..... ...|+.. ..| .+..--.++++++|.+||.. ...|||+.++|+
T Consensus 220 YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~--- 295 (632)
T KOG0584|consen 220 YNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK--- 295 (632)
T ss_pred cchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh---
Confidence 66889999999999999999999976422 2222221 111 12222357899999999999 999999999999
Q ss_pred hhhhcCCccccCC
Q psy4039 508 LYLWAPKHWLYGA 520 (588)
Q Consensus 508 ~~~~~~h~w~~~~ 520 (588)
||||...
T Consensus 296 ------d~Ff~~d 302 (632)
T KOG0584|consen 296 ------DPFFDED 302 (632)
T ss_pred ------Chhhccc
Confidence 9999843
No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.9e-36 Score=304.81 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=190.7
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|++.+.||+|+||+||+|... ++.||||.+...... .......+|+..+..+ ..||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~----------------~~~~~~~~e~~~l~~~---~~h~~i~ 61 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS----------------WEECMNLREVKSLRKL---NEHPNIV 61 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc----------------hhHHHHHHHHHHHHhc---cCCCCch
Confidence 678899999999999999986 688999998432110 0111223577777776 2399999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+.. ..++||||++|+|.+++.... ..+++.++..++.|++.||.
T Consensus 62 ~~~~~~~~~~----------------------------~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 113 (283)
T cd07830 62 KLKEVFREND----------------------------ELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLA 113 (283)
T ss_pred hHHHHhhcCC----------------------------cEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence 9999887621 489999999999999998753 47899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+++++|+||||+||+++++ +.++|+|||++......... ....|+..|+|||++..... .+
T Consensus 114 ~Lh~~~i~H~dl~~~ni~i~~~-----~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~-----~~ 177 (283)
T cd07830 114 HIHKHGFFHRDLKPENLLVSGP-----EVVKIADFGLAREIRSRPPY------TDYVSTRWYRAPEILLRSTS-----YS 177 (283)
T ss_pred HHHHCCcccCCCChhhEEEcCC-----CCEEEeecccceeccCCCCc------CCCCCcccccCceeeecCcC-----cC
Confidence 9999999999999999999987 89999999999765432111 13458889999998854331 34
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccccc-------------------------c--c-----cccCCCCCCccHHHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY-------------------------E--V-----NALPQLNTNVPEVMR 482 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-------------------------~--~-----~~~~~~~~~~~~~l~ 482 (588)
.++|+||||+++|||++|.+||........+ . . ..........+.++.
T Consensus 178 ~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (283)
T cd07830 178 SPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAI 257 (283)
T ss_pred CccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHH
Confidence 6899999999999999999998543111000 0 0 000011122367899
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+++.+||+.||++|||+++++. |||+
T Consensus 258 ~li~~cl~~~p~~Rpt~~ei~~---------~~~~ 283 (283)
T cd07830 258 DLIKDMLRWDPKKRPTASQALQ---------HPYF 283 (283)
T ss_pred HHHHHhcccCcccCCCHHHHhh---------CCCC
Confidence 9999999999999999999999 9996
No 355
>KOG3653|consensus
Probab=100.00 E-value=5.5e-37 Score=315.74 Aligned_cols=261 Identities=21% Similarity=0.257 Sum_probs=198.2
Q ss_pred ccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
-..++..++.++||+|+||.||+|.+.++.||||++.. ..++.+.+|-+|.... .++|
T Consensus 206 l~~l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~--------------------~~kqs~~~Ek~Iy~lp--~m~h 263 (534)
T KOG3653|consen 206 LLELDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE--------------------QEKQSFQNEKNIYSLP--GMKH 263 (534)
T ss_pred cccCCchhhHHHhhcCccceeehhhccCceeEEEecCH--------------------HHHHHHHhHHHHHhcc--Cccc
Confidence 34567788899999999999999999999999999842 1334566677766654 2589
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
+||++++++-.. |....+.+++|++|. .|||.+||+.+ .++|.....|+..|+
T Consensus 264 ~nIl~Fi~~ekr------------------------~t~~~~eywLVt~fh~kGsL~dyL~~n--tisw~~~cria~Sma 317 (534)
T KOG3653|consen 264 ENILQFIGAEKR------------------------GTADRMEYWLVTEFHPKGSLCDYLKAN--TISWNSLCRIAESMA 317 (534)
T ss_pred hhHHHhhchhcc------------------------CCccccceeEEeeeccCCcHHHHHHhc--cccHHHHHHHHHHHH
Confidence 999999977543 333355699999999 79999999988 899999999999999
Q ss_pred HHHHHHHhC---------CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhH
Q psy4039 351 EGVTHLNMH---------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEV 421 (588)
Q Consensus 351 ~gL~yLH~~---------~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 421 (588)
+||+|||+. .|+|||||+.|||+.+| .++.|+|||+|..+..+.....+ ...+||..|||||+
T Consensus 318 rGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D-----lTccIaDFGLAl~~~p~~~~~d~---~~qVGT~RYMAPEv 389 (534)
T KOG3653|consen 318 RGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND-----LTCCIADFGLALRLEPGKPQGDT---HGQVGTRRYMAPEV 389 (534)
T ss_pred HHHHHhcccCCcCCCCCCccccccccccceEEccC-----CcEEeeccceeEEecCCCCCcch---hhhhhhhhhcCHHH
Confidence 999999973 79999999999999998 89999999999988765443222 24789999999999
Q ss_pred HhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCC------------Cccc---------cccccccccccCCCCCC----
Q psy4039 422 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNP------------FYQS---------ARNTDYEVNALPQLNTN---- 476 (588)
Q Consensus 422 l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~P------------f~~~---------~~~~~~~~~~~~~~~~~---- 476 (588)
+.+...........+.||||+|.++|||++.-.- |... ..........+|.++..
T Consensus 390 LEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h 469 (534)
T KOG3653|consen 390 LEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH 469 (534)
T ss_pred HhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC
Confidence 9876532111112357999999999999974322 2211 11112223344444432
Q ss_pred -ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 477 -VPEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 477 -~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
-...+++.+..||..||+.|.|+.-+.+-+..
T Consensus 470 ~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~ 502 (534)
T KOG3653|consen 470 AGMAVLCETIEECWDHDAEARLTAGCVEERMAE 502 (534)
T ss_pred ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHH
Confidence 23458899999999999999999877665443
No 356
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.8e-36 Score=300.34 Aligned_cols=241 Identities=18% Similarity=0.196 Sum_probs=181.9
Q ss_pred eeecccCceeEEEEEECCe------------eEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 202 KFIAKGTNAVVYEATFRGV------------EYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~g~------------~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
+.||+|+||.||+|.+... .|++|.+.... . ....+.+|+.+++.+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---------------~---~~~~~~~e~~~l~~l---- 58 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---------------R---DSLAFFETASLMSQL---- 58 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---------------h---hHHHHHHHHHHHHcC----
Confidence 4699999999999999732 47888763211 0 134566788888877
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+||||+++++++.. . ..++||||+ +|+|.+++......+++..+..++.|
T Consensus 59 ~h~~i~~~~~~~~~-~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 109 (259)
T cd05037 59 SHKHLVKLYGVCVR-D----------------------------ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQ 109 (259)
T ss_pred CCcchhheeeEEec-C----------------------------CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHH
Confidence 89999999998765 1 268999999 68999999876557999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCC--CCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSED--NTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~--~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
|+.||.|||++||+||||||+|||++.+.. .....+||+|||++...... ....++..|+|||++.+..
T Consensus 110 i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~y~aPE~~~~~~ 180 (259)
T cd05037 110 LASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR---------EERVERIPWIAPECIRNGQ 180 (259)
T ss_pred HHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccc---------cccccCCCccChhhhcCCC
Confidence 999999999999999999999999987631 11237999999999764331 1244677899999987652
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc-ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE-VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.. .+.++|||||||++|||++ |..||.......... .......+......+.+++.+||..+|.+|||+.++++
T Consensus 181 ~~----~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 181 AS----LTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred CC----cchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11 4578999999999999999 577775532111110 01111222233478999999999999999999999887
Q ss_pred HH
Q psy4039 505 VC 506 (588)
Q Consensus 505 ~L 506 (588)
.|
T Consensus 257 ~l 258 (259)
T cd05037 257 DL 258 (259)
T ss_pred hc
Confidence 43
No 357
>KOG1035|consensus
Probab=100.00 E-value=3.2e-36 Score=337.89 Aligned_cols=282 Identities=26% Similarity=0.334 Sum_probs=196.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|+..++||+||||.||+++.+ |+.||||+|.... . . ..-..+.+|+.++.+| +|||
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s--~-------------~~~skI~rEVk~LArL----nHpN 538 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S--D-------------KLYSKILREVKLLARL----NHPN 538 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-H--H-------------HHHHHHHHHHHHHhhc----CCcc
Confidence 57888999999999999999998 9999999995422 0 0 0123356799999998 9999
Q ss_pred eEEEeeeeeccCCCCCC-------------C-------CCcCCCCC-------------CCccCCC--------------
Q psy4039 274 VVVMHFAFTDFVPSIPD-------------S-------SLIYPSAL-------------PARLNPT-------------- 306 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~-------------~-------~~l~~~~~-------------~~~~~~~-------------- 306 (588)
||++|..+.+....... + ...+-.+. +...+..
T Consensus 539 VVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~ 618 (1351)
T KOG1035|consen 539 VVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDE 618 (1351)
T ss_pred eeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCc
Confidence 99998877653321100 0 00000000 0000000
Q ss_pred --------C----------------------------CCC--------CCceEEEEEecCC-CcHHHHHHHhcCCC--CH
Q psy4039 307 --------G----------------------------GYG--------RNMSLFILMKKYN-TDLRNYLRERCAQL--SM 339 (588)
Q Consensus 307 --------g----------------------------g~~--------~~~~l~lvme~~~-gsL~~~L~~~~~~l--~~ 339 (588)
| +.. ....+||-||||. .+|.++++.+ .+ ..
T Consensus 619 e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N--~~~~~~ 696 (1351)
T KOG1035|consen 619 ENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN--HFNSQR 696 (1351)
T ss_pred ccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc--ccchhh
Confidence 0 000 1157899999996 5666666655 34 47
Q ss_pred HHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC----C--------CC-ccccccc
Q psy4039 340 HERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK----S--------GL-SMQYSSA 406 (588)
Q Consensus 340 ~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~----~--------~~-~~~~~~~ 406 (588)
...+.++++|++||.|+|++|||||||||.||++|++ ..|||+|||+|.... . +. .......
T Consensus 697 d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~-----~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~ 771 (1351)
T KOG1035|consen 697 DEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR-----NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGD 771 (1351)
T ss_pred HHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC-----CCeeecccccchhhhhhhhhHhhccCccccccCCCCcc
Confidence 7899999999999999999999999999999999987 799999999998721 0 00 0111223
Q ss_pred cccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCC---CCCCccH
Q psy4039 407 DIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQ---LNTNVPE 479 (588)
Q Consensus 407 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~---~~~~~~~ 479 (588)
.+..+||.-|+|||++.+... ..|+.|+|+||+|||++||+. ||...+..... .....|. ++..--+
T Consensus 772 ~Ts~VGTalYvAPEll~~~~~---~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~ 845 (1351)
T KOG1035|consen 772 LTSQVGTALYVAPELLSDTSS---NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHP 845 (1351)
T ss_pred cccccceeeeecHHHhccccc---ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccch
Confidence 456889999999999976653 347789999999999999985 67664333221 1111111 1222224
Q ss_pred HHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 480 VMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 480 ~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.-..+|+.||+.||.+||||.|+|+ +.|+..
T Consensus 846 ~e~slI~~Ll~hdP~kRPtA~eLL~---------s~llpp 876 (1351)
T KOG1035|consen 846 EEASLIRWLLSHDPSKRPTATELLN---------SELLPP 876 (1351)
T ss_pred HHHHHHHHHhcCCCccCCCHHHHhh---------ccCCCc
Confidence 4678999999999999999999999 888864
No 358
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.9e-36 Score=313.48 Aligned_cols=252 Identities=18% Similarity=0.185 Sum_probs=186.2
Q ss_pred eeeccc--CceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 202 KFIAKG--TNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 202 ~~IG~G--~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
..||+| +||+||++.+. ++.||||++....... . ..+.+.+|+.+++.+ +||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~---~------------~~~~~~~e~~~~~~l----~h~niv~~ 64 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE---E------------HLKALQNEVVLSHFF----RHPNIMTS 64 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH---H------------HHHHHHHHHHHHHhC----CCCCcceE
Confidence 456766 99999999985 8999999985321110 0 123455677777766 89999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~gL~y 355 (588)
+++|.... ..+++|||+ .++|.+++... ...+++..+..++.|++.||+|
T Consensus 65 ~~~~~~~~----------------------------~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~ 116 (328)
T cd08226 65 WTVFTTGS----------------------------WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNY 116 (328)
T ss_pred eeeEecCC----------------------------ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 99998632 489999999 57999998864 2368999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCC-Cccccc-cccccccCCccccchhHHhcCCCCccCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSG-LSMQYS-SADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~-~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
||++||+||||||+|||++.+ +.++++|||.+...... ...... .......++..|+|||++.+.... +
T Consensus 117 lH~~~ivHrDlkp~Nill~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~----~ 187 (328)
T cd08226 117 LHQNGYIHRNIKASHILISGD-----GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYG----Y 187 (328)
T ss_pred HHhCCeecCCCCHHHEEEeCC-----CcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCC----C
Confidence 999999999999999999987 78999999865432221 110000 000112356789999999764322 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccccc-----------------------------------------------
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----------------------------------------------- 466 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----------------------------------------------- 466 (588)
+.++|||||||++|||++|..||..........
T Consensus 188 ~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (328)
T cd08226 188 NVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTM 267 (328)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccc
Confidence 478999999999999999999996531110000
Q ss_pred --ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 467 --VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 467 --~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.....+.+..+++.+.+|+++||+.||++|||++++++ |||+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~---------~~~~~ 312 (328)
T cd08226 268 TSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS---------HAFFK 312 (328)
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh---------CHHHH
Confidence 00001112346778999999999999999999999999 99986
No 359
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.8e-35 Score=299.85 Aligned_cols=248 Identities=17% Similarity=0.219 Sum_probs=180.2
Q ss_pred eeecccCceeEEEEEEC-C---eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 202 KFIAKGTNAVVYEATFR-G---VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g---~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
+.||+|+||.||+|... + ..+++|.+...... .....+.+|+.+++.+ +||||+++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~e~~~~~~l----~h~~iv~~ 60 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS----------------KEQNEFLQQGDPYRIL----QHPNILQC 60 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh----------------HHHHHHHHHHHHHhcc----CCcchhhe
Confidence 36999999999999754 2 34566665321100 0123566677888776 99999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC---AQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~---~~l~~~~~~~i~~ql~~gL 353 (588)
++.|.+.. ..++||||+ +|+|.+++.... ..+++..+..++.||++||
T Consensus 61 ~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al 112 (268)
T cd05086 61 LGQCVEAI----------------------------PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGV 112 (268)
T ss_pred EEEecCCC----------------------------ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHH
Confidence 99987632 389999999 589999998642 2467778889999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC-CccCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG-LFSFV 432 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~~ 432 (588)
.|||+++|+||||||+|||++.+ +.++|+|||++......... .......|++.|+|||++....+ .....
T Consensus 113 ~~lH~~~i~H~dikp~nil~~~~-----~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 184 (268)
T cd05086 113 THMHKHNFLHSDLALRNCFLTSD-----LTVKVGDYGIGPSRYKEDYI---ETEDDKCVPLRWLAPELVGEFHGGLITAE 184 (268)
T ss_pred HHHHHCCeeccCCccceEEEcCC-----ccEEecccccccccCcchhh---hcccCCcCcccccCchhcccccCccccCC
Confidence 99999999999999999999887 78999999998643221111 11124568899999999854321 11222
Q ss_pred CCCcCchhhHHHHHHHHhc-CCCCCccccccccc--------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY--------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
.+.++|||||||++|||++ |..||........+ .....+.+...+++.+.+++..|| .+|++||++++++
T Consensus 185 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~ 263 (268)
T cd05086 185 QTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVH 263 (268)
T ss_pred CCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHH
Confidence 4578999999999999996 56787542211111 111223445567889999999999 6899999999998
Q ss_pred HHH
Q psy4039 504 TVC 506 (588)
Q Consensus 504 ~~L 506 (588)
..|
T Consensus 264 ~~l 266 (268)
T cd05086 264 RLL 266 (268)
T ss_pred HHh
Confidence 755
No 360
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-35 Score=297.49 Aligned_cols=244 Identities=27% Similarity=0.360 Sum_probs=192.1
Q ss_pred eEEeeeecccCceeEEEEEECC------eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFRG------VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~g------~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+++.+.||.|+||.||+|.+.. ..||+|++....... ....+..|+.+++.+ +|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------~~~~~~~e~~~l~~l----~~ 60 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ----------------QIEEFLREARIMRKL----DH 60 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH----------------HHHHHHHHHHHHHhc----CC
Confidence 3567889999999999999974 789999985321110 123456688888887 99
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCC-CCHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQ-LSMHERVLLFTQL 349 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~-l~~~~~~~i~~ql 349 (588)
|||+++++++.+.. ..+++||++ +++|.+++...... +++.++..++.|+
T Consensus 61 ~~i~~~~~~~~~~~----------------------------~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql 112 (258)
T smart00219 61 PNIVKLLGVCTEEE----------------------------PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQI 112 (258)
T ss_pred CchheEEEEEcCCC----------------------------eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHH
Confidence 99999999887632 489999999 57999999875433 9999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
+.||+|||+.+++||||||+||+++++ +.++|+|||+++........... ...+++.|+|||.+.+..
T Consensus 113 ~~~l~~lh~~~~~h~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~y~~Pe~~~~~~--- 180 (258)
T smart00219 113 ARGMEYLESKNFIHRDLAARNCLVGEN-----LVVKISDFGLSRDLYDDDYYKKK----GGKLPIRWMAPESLKDGK--- 180 (258)
T ss_pred HHHHHHHhcCCeeecccccceEEEccC-----CeEEEcccCCceecccccccccc----cCCCcccccChHHhccCC---
Confidence 999999999999999999999999987 78999999999876543211110 123788999999985443
Q ss_pred cCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++||||+|+++|||++ |..||........ ......+..+..+|.++.+++.+||..||++|||+.++++
T Consensus 181 ---~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 181 ---FTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ---CCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 4578999999999999998 7888865322111 1122233445668999999999999999999999999876
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.4e-35 Score=301.30 Aligned_cols=249 Identities=25% Similarity=0.323 Sum_probs=194.4
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|+..+.||+|+||.||+|+.. ++.||+|++...... ......+..|+.+++.+ +||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---------------~~~~~~~~~e~~~l~~~----~~~~i~ 61 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE---------------EGIPSTALREISLLKEL----KHPNIV 61 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc---------------ccccHHHHHHHHHHHhc----CCCCHH
Confidence 567788999999999999997 789999998542200 01123345688888887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
++++++.+. ...++|||+++++|.+++......+++..+..++.|++.||.|
T Consensus 62 ~~~~~~~~~----------------------------~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~ 113 (282)
T cd07829 62 KLLDVIHTE----------------------------RKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAY 113 (282)
T ss_pred HHHhhhhcC----------------------------CceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 999988763 2489999999889999998764579999999999999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCC
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYS 435 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ 435 (588)
||++||+||||+|+||+++++ +.++|+|||+++....... .. ....++..|+|||++.+... .+.
T Consensus 114 LH~~~i~H~~l~~~ni~~~~~-----~~~~l~d~g~~~~~~~~~~-~~----~~~~~~~~~~aPE~~~~~~~-----~~~ 178 (282)
T cd07829 114 CHSHRILHRDLKPQNILINRD-----GVLKLADFGLARAFGIPLR-TY----THEVVTLWYRAPEILLGSKH-----YST 178 (282)
T ss_pred HHHCCcccCCCChheEEEcCC-----CCEEEecCCcccccCCCcc-cc----CccccCcCcCChHHhcCCcC-----CCc
Confidence 999999999999999999987 8999999999977544221 11 12346778999999865421 456
Q ss_pred cCchhhHHHHHHHHhcCCCCCccccccccc-----------------------cccccC--------CCCCCccHHHHHH
Q psy4039 436 KSDAWTAGTVAYEIFGHDNPFYQSARNTDY-----------------------EVNALP--------QLNTNVPEVMRRL 484 (588)
Q Consensus 436 ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----------------------~~~~~~--------~~~~~~~~~l~~L 484 (588)
++|||||||++|||++|.+||......... .....+ .....++.++.++
T Consensus 179 ~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (282)
T cd07829 179 AVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDL 258 (282)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHH
Confidence 899999999999999999999653211000 000000 1112347889999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 485 VAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 485 i~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
+.+||..||++||++++++. |||+
T Consensus 259 i~~~l~~~P~~Rp~~~~~l~---------~p~~ 282 (282)
T cd07829 259 LSKMLQYNPAKRISAKEALK---------HPYF 282 (282)
T ss_pred HHHhhccCcccCCCHHHHhh---------CcCC
Confidence 99999999999999999999 9996
No 362
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.6e-36 Score=300.10 Aligned_cols=249 Identities=26% Similarity=0.375 Sum_probs=191.5
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||.|+||.||++.+. ++.||+|.+....... ......+.+|+.+++.+ +||||+++++.+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~--------------~~~~~~~~~e~~~l~~~----~h~~i~~~~~~~ 62 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR--------------KNQVDQVLTERDILSQA----QSPYVVKLYYSF 62 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh--------------hhHHHHHHHHHHHHHhC----CCcchhHHHHhe
Confidence 689999999999997 8899999985322110 01223456688888887 899999999887
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+. ...|++|||+ +++|.+++...+ .+++..+..++.||++||.|||+++
T Consensus 63 ~~~----------------------------~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 63 QGK----------------------------KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred ecC----------------------------cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 652 2489999999 579999998765 7999999999999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc---ccccccccccCCccccchhHHhcCCCCccCCCCCcC
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM---QYSSADIELGGNVALMAPEVALATPGLFSFVNYSKS 437 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~---~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ks 437 (588)
|+||||+|+||+++.+ +.++|+|||++......... ..........++..|+|||...... .+.++
T Consensus 114 i~H~di~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~------~~~~~ 182 (265)
T cd05579 114 IIHRDLKPDNILIDSN-----GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG------HSKTV 182 (265)
T ss_pred eecCCCCHHHeEEcCC-----CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCC------CCcch
Confidence 9999999999999987 78999999998764332110 0011112456888999999987654 34679
Q ss_pred chhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCC--ccHHHHHHHHHhhhhCCCCCCCH---HHHHHHHhhhh
Q psy4039 438 DAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTN--VPEVMRRLVAKLLENDPSDRPSA---ELAATVCQLYL 510 (588)
Q Consensus 438 DVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~--~~~~l~~Li~~~L~~dP~~Rps~---~e~l~~L~~~~ 510 (588)
||||||+++||+++|..||........... ......+.. ++..+.+++.+||+.+|.+|||+ .++++
T Consensus 183 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~------ 256 (265)
T cd05579 183 DWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN------ 256 (265)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc------
Confidence 999999999999999999975432211111 011122233 48999999999999999999999 66666
Q ss_pred hcCCccccC
Q psy4039 511 WAPKHWLYG 519 (588)
Q Consensus 511 ~~~h~w~~~ 519 (588)
|||++.
T Consensus 257 ---~~~~~~ 262 (265)
T cd05579 257 ---HPFFKG 262 (265)
T ss_pred ---CccccC
Confidence 999963
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6.6e-36 Score=300.91 Aligned_cols=251 Identities=26% Similarity=0.340 Sum_probs=193.4
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|.+.+.||+|+||.||++.+. +..+++|+++....... .......+.+|+.+++.+ +||||
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~e~~~l~~l----~h~~i 64 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGEL------------NPNETVQANQEAQLLSKL----DHPAI 64 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEecccccccc------------CcchHHHHHHHHHHHHhC----CCCcH
Confidence 4788999999999999999887 45577777643221110 001112344577888876 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~ql~ 350 (588)
+++++++.+.. ..+++|||+ +++|.+++.. ....+++.++..++.|++
T Consensus 65 ~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 116 (260)
T cd08222 65 VKFHASFLERD----------------------------AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLL 116 (260)
T ss_pred HHHHHHHhcCC----------------------------ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHH
Confidence 99998876532 389999999 5799998874 234799999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+||.|||+.|++|+||||+||+++.+ .++|+|||+++........ .....|++.|+|||.+.+..
T Consensus 117 ~~l~~lH~~~i~h~~l~~~nili~~~------~~~l~d~g~~~~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~---- 181 (260)
T cd08222 117 LGVHYMHQRRILHRDLKAKNIFLKNN------LLKIGDFGVSRLLMGSCDL-----ATTFTGTPYYMSPEALKHQG---- 181 (260)
T ss_pred HHHHHHHHcCccccCCChhheEeecC------CEeecccCceeecCCCccc-----ccCCCCCcCccCHHHHccCC----
Confidence 99999999999999999999999743 6999999998775432211 11345889999999986543
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccccc---ccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD---YEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~---~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|+||||+++|+|++|..||........ ......+..+..++.++.++|.+||..||++||++.+++.
T Consensus 182 --~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--- 256 (260)
T cd08222 182 --YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR--- 256 (260)
T ss_pred --CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh---
Confidence 34679999999999999999999965322111 1122344456678899999999999999999999999999
Q ss_pred hhhhcCCccc
Q psy4039 508 LYLWAPKHWL 517 (588)
Q Consensus 508 ~~~~~~h~w~ 517 (588)
|||+
T Consensus 257 ------~~~~ 260 (260)
T cd08222 257 ------NPFI 260 (260)
T ss_pred ------CCCC
Confidence 9996
No 364
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1e-35 Score=306.26 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=194.9
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|+....||+|+||.||++... +..||||.+.... ......+.+|+.+++.+ +||||+
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----------------~~~~~~~~~e~~~l~~l----~h~~iv 80 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-----------------QQRRELLFNEVVIMRDY----QHENVV 80 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-----------------hhHHHHHHHHHHHHHhc----CCcchh
Confidence 334468999999999999885 7899999873211 01233466788888887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.+.. ..+++|||+ +++|.+++... .+++..+..++.|++.||+
T Consensus 81 ~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~ 130 (292)
T cd06657 81 EMYNSYLVGD----------------------------ELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALS 130 (292)
T ss_pred heeeEEEeCC----------------------------EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Confidence 9999987632 489999999 57899887654 7899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||++||+||||||+||+++.+ +.++|+|||++........ ......||+.|+|||.+.+.. .+
T Consensus 131 ~lH~~givH~dl~p~Nilv~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~------~~ 194 (292)
T cd06657 131 VLHAQGVIHRDIKSDSILLTHD-----GRVKLSDFGFCAQVSKEVP-----RRKSLVGTPYWMAPELISRLP------YG 194 (292)
T ss_pred HHHHCCeecCCCCHHHEEECCC-----CCEEEcccccceecccccc-----cccccccCccccCHHHhcCCC------CC
Confidence 9999999999999999999987 7899999999876533211 111356899999999986544 45
Q ss_pred CcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
.++||||+||++|||++|..||......... .....+. ....+++.+.+++.+||+.||.+||++.+++.
T Consensus 195 ~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~----- 269 (292)
T cd06657 195 PEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK----- 269 (292)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc-----
Confidence 6899999999999999999999764221111 0011111 12357889999999999999999999999999
Q ss_pred hhcCCccccCCCC
Q psy4039 510 LWAPKHWLYGATP 522 (588)
Q Consensus 510 ~~~~h~w~~~~~~ 522 (588)
|||+....+
T Consensus 270 ----~~~~~~~~~ 278 (292)
T cd06657 270 ----HPFLAKAGP 278 (292)
T ss_pred ----ChHHhccCC
Confidence 999985544
No 365
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.4e-35 Score=301.46 Aligned_cols=249 Identities=26% Similarity=0.354 Sum_probs=200.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|+..+.||+|+||.||+|.+. +..||+|.+..... ....+.+|+.+++.+ +|+|
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------------~~~~~~~e~~~l~~l----~~~~ 76 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------------------NKELIINEILIMKDC----KHPN 76 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------------------hHHHHHHHHHHHHHC----CCCC
Confidence 67899999999999999999997 88999999853211 123456688888887 8999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
|+++++++.... ..++++||++ ++|.+++......+++..+..++.|++.|
T Consensus 77 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~ 128 (286)
T cd06614 77 IVDYYDSYLVGD----------------------------ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQG 128 (286)
T ss_pred eeEEEEEEEECC----------------------------EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 999999987632 4899999995 89999998865579999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||+.||+|+||||+||+++.+ +.++|+|||++........ ......|++.|+|||++.+..
T Consensus 129 L~~lH~~gi~H~dl~p~ni~i~~~-----~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~------ 192 (286)
T cd06614 129 LEYLHSQNVIHRDIKSDNILLSKD-----GSVKLADFGFAAQLTKEKS-----KRNSVVGTPYWMAPEVIKRKD------ 192 (286)
T ss_pred HHHHHhCCeeeCCCChhhEEEcCC-----CCEEECccchhhhhccchh-----hhccccCCcccCCHhHhcCCC------
Confidence 999999999999999999999987 7899999999865433211 111345788999999987654
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCccccccccc---cccccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVNALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+.++|||||||++|+|++|..||......... .....+. .+..++.+++++|.+||+.+|.+||++.+++.
T Consensus 193 ~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~--- 269 (286)
T cd06614 193 YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ--- 269 (286)
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh---
Confidence 457899999999999999999998763221111 0111111 12347899999999999999999999999999
Q ss_pred hhhhcCCccccC
Q psy4039 508 LYLWAPKHWLYG 519 (588)
Q Consensus 508 ~~~~~~h~w~~~ 519 (588)
|+|+..
T Consensus 270 ------~~~~~~ 275 (286)
T cd06614 270 ------HPFLKK 275 (286)
T ss_pred ------ChHhhc
Confidence 999985
No 366
>KOG4278|consensus
Probab=100.00 E-value=2.3e-36 Score=317.34 Aligned_cols=258 Identities=22% Similarity=0.276 Sum_probs=212.6
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
.+.|+..-.+.....+||-|.||.||.|.|+ ...||||.++.. .+..+.|..|..+|+.+
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED------------------tMeveEFLkEAAvMKei 320 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------------------TMEVEEFLKEAAVMKEI 320 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc------------------chhHHHHHHHHHHHHhh
Confidence 3677887788888999999999999999998 568999998421 12345678899999998
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-CCCCHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC-AQLSMHERV 343 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~-~~l~~~~~~ 343 (588)
+|||+|+|+|+|+...| +|||+||| .|+|.+||+++. ..++.-..+
T Consensus 321 ----kHpNLVqLLGVCT~EpP----------------------------FYIiTEfM~yGNLLdYLRecnr~ev~avvLl 368 (1157)
T KOG4278|consen 321 ----KHPNLVQLLGVCTHEPP----------------------------FYIITEFMCYGNLLDYLRECNRSEVPAVVLL 368 (1157)
T ss_pred ----cCccHHHHhhhhccCCC----------------------------eEEEEecccCccHHHHHHHhchhhcchhHHH
Confidence 99999999999998653 99999999 799999999874 356777788
Q ss_pred HHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHh
Q psy4039 344 LLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVAL 423 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 423 (588)
.++.||..|++||..+++|||||-..|.|+.++ ..+|++|||+++....+.. +.+. ...-.+.|.|||-+.
T Consensus 369 yMAtQIsSaMeYLEkknFIHRDLAARNCLVgEn-----hiVKvADFGLsRlMtgDTY---TAHA-GAKFPIKWTAPEsLA 439 (1157)
T KOG4278|consen 369 YMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-----HIVKVADFGLSRLMTGDTY---TAHA-GAKFPIKWTAPESLA 439 (1157)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhcccccc-----ceEEeeccchhhhhcCCce---eccc-CccCcccccCccccc
Confidence 889999999999999999999999999999988 7999999999998655322 2211 122356899999987
Q ss_pred cCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccccc---cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH
Q psy4039 424 ATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDY---EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA 499 (588)
Q Consensus 424 ~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~---~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~ 499 (588)
... .+.|+|||+|||+|||+.| |-.||.+-.....| +...+..-|..||+.+.+||+.||+++|.+||++
T Consensus 440 yNt------FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsF 513 (1157)
T KOG4278|consen 440 YNT------FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSF 513 (1157)
T ss_pred ccc------cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccH
Confidence 654 4578999999999999997 78898874333333 3344556678999999999999999999999999
Q ss_pred HHHHHHHhhhh
Q psy4039 500 ELAATVCQLYL 510 (588)
Q Consensus 500 ~e~l~~L~~~~ 510 (588)
.++-+.++.++
T Consensus 514 aeiHqafEtmf 524 (1157)
T KOG4278|consen 514 AEIHQAFETMF 524 (1157)
T ss_pred HHHHHHHHHHh
Confidence 99988777665
No 367
>KOG1094|consensus
Probab=100.00 E-value=4.7e-36 Score=314.22 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=206.0
Q ss_pred cccccCCeEEeeeecccCceeEEEEEECC-eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFRG-VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g-~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.++.-+.+.+.++||+|-||.|..|...+ ..||||+++.....+ .+.+|.+||++|.+|
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~----------------~r~~F~kEIkiLsqL---- 592 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKN----------------ARNDFLKEIKILSRL---- 592 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchh----------------HHHHHHHHHHHHhcc----
Confidence 45666778899999999999999999986 899999996533211 245678899999998
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcC-CCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCA-QLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~-~l~~~~~~~i~~ 347 (588)
+|||||.|+|+|..++| +++++||+ +|+|.+|+..+.. .+.......|+.
T Consensus 593 khPNIveLvGVC~~DeP----------------------------icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~t 644 (807)
T KOG1094|consen 593 KHPNIVELLGVCVQDDP----------------------------LCMITEYMENGDLNQFLSAHELPTAETAPGVSICT 644 (807)
T ss_pred CCCCeeEEEeeeecCCc----------------------------hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHH
Confidence 99999999999998664 89999999 7999999998732 246667788999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
||+.|++||.+.++|||||.+.|+|+|.+ +++||+|||++|.+-.+.... .....+-.+.|||||.+.-+.
T Consensus 645 qiasgmaYLes~nfVHrd~a~rNcLv~~e-----~~iKiadfgmsR~lysg~yy~---vqgr~vlpiRwmawEsillgk- 715 (807)
T KOG1094|consen 645 QIASGMAYLESLNFVHRDLATRNCLVDGE-----FTIKIADFGMSRNLYSGDYYR---VQGRAVLPIRWMAWESILLGK- 715 (807)
T ss_pred HHHHHHHHHHhhchhhccccccceeecCc-----ccEEecCcccccccccCCcee---eecceeeeeeehhHHHHHhcc-
Confidence 99999999999999999999999999988 899999999999755443221 112345578999999987655
Q ss_pred CccCCCCCcCchhhHHHHHHHHh--cCCCCCccccccccc----------cccccCCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIF--GHDNPFYQSARNTDY----------EVNALPQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ell--tG~~Pf~~~~~~~~~----------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
.++++|||+|||++||++ |...||......... .....+..|.-||..+.+||.+||..|..+
T Consensus 716 -----FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~ 790 (807)
T KOG1094|consen 716 -----FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQ 790 (807)
T ss_pred -----ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhc
Confidence 568999999999999986 578998763221111 112233456789999999999999999999
Q ss_pred CCCHHHHHHHHh
Q psy4039 496 RPSAELAATVCQ 507 (588)
Q Consensus 496 Rps~~e~l~~L~ 507 (588)
||+++++...|+
T Consensus 791 RPsFe~lh~~lq 802 (807)
T KOG1094|consen 791 RPSFEQLHLFLQ 802 (807)
T ss_pred CCCHHHHHHHHH
Confidence 999999977665
No 368
>KOG2052|consensus
Probab=100.00 E-value=7.1e-36 Score=305.52 Aligned_cols=258 Identities=24% Similarity=0.342 Sum_probs=194.9
Q ss_pred CCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
.+..+.+.||+|.||.||+|.|+|..||||++... .++.+-+|.+|.+.+ +++|+||+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr--------------------dE~SWfrEtEIYqTv--mLRHENIL 268 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR--------------------DERSWFRETEIYQTV--MLRHENIL 268 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEeccc--------------------chhhhhhHHHHHHHH--Hhccchhh
Confidence 67899999999999999999999999999999431 223345677777654 36999999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
.+++.-.. +.+.-..+|+|.+|. +|||.+||... .++.+..++++..++.||+
T Consensus 269 gFIaaD~~------------------------~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLa 322 (513)
T KOG2052|consen 269 GFIAADNK------------------------DNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLA 322 (513)
T ss_pred hhhhcccc------------------------CCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHH
Confidence 98876433 223344699999999 69999999986 8999999999999999999
Q ss_pred HHHhC--------CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 355 HLNMH--------RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 355 yLH~~--------~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
|||-. .|.|||||+.|||+..+ +.+.|+|+|+|....+.... ........+||-.|||||++...-
T Consensus 323 HLH~eI~GTqgKPaIAHRDlKSKNILVKkn-----~~C~IADLGLAv~h~~~t~~-idi~~N~rVGTKRYMAPEvLdeti 396 (513)
T KOG2052|consen 323 HLHMEIVGTQGKPAIAHRDLKSKNILVKKN-----GTCCIADLGLAVRHDSDTDT-IDIPPNPRVGTKRYMAPEVLDETI 396 (513)
T ss_pred HHHHHHhcCCCCchhhccccccccEEEccC-----CcEEEeeceeeEEecccCCc-ccCCCCCccceeeccChHHhhhhc
Confidence 99952 69999999999999998 89999999999876553211 111223678999999999997654
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhc-----C-----CCCCcccccc---------ccccccccCCCCCCc---c--HHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFG-----H-----DNPFYQSARN---------TDYEVNALPQLNTNV---P--EVMR 482 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~Ellt-----G-----~~Pf~~~~~~---------~~~~~~~~~~~~~~~---~--~~l~ 482 (588)
..-.+..+..+||||||.++||+.. | .+||++...+ ..-....+|.+|... | ..+.
T Consensus 397 n~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~ 476 (513)
T KOG2052|consen 397 NMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMA 476 (513)
T ss_pred ChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHH
Confidence 3222223456899999999999984 2 5788763211 111223344444332 2 3577
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
++|+.||..||..|.|+--+-+.+.
T Consensus 477 klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 477 KLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred HHHHHhhcCCchhhhHHHHHHHHHH
Confidence 8999999999999999877666544
No 369
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-35 Score=294.95 Aligned_cols=243 Identities=29% Similarity=0.370 Sum_probs=195.6
Q ss_pred CeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV 274 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI 274 (588)
+|++.+.||+|+||.||++.+. +..+|||.+....... .....+.+|+.+++.+ +||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------~~~~~~~~e~~~l~~l----~~~~i 61 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ---------------KEREDAVNEIRILASV----NHPNI 61 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH---------------HHHHHHHHHHHHHHhC----CCCCc
Confidence 5888999999999999999886 7899999985322110 0122345688888887 89999
Q ss_pred EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy4039 275 VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQLL 350 (588)
Q Consensus 275 V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql~ 350 (588)
+++++++.+. ...++||||+ +++|.+++... ...+++..++.++.|++
T Consensus 62 ~~~~~~~~~~----------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~ 113 (256)
T cd08530 62 ISYKEAFLDG----------------------------NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL 113 (256)
T ss_pred hhhhhhhccC----------------------------CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence 9999887652 2589999999 57999998763 24789999999999999
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCcc
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
.||.|||+.|++|+||+|+||+++.+ +.+||+|||++........ ....|++.|+|||.+.+..
T Consensus 114 ~al~~lh~~~i~h~~l~~~ni~~~~~-----~~~kl~d~g~~~~~~~~~~-------~~~~~~~~~~~Pe~~~~~~---- 177 (256)
T cd08530 114 RGLQALHEQKILHRDLKSANILLVAN-----DLVKIGDLGISKVLKKNMA-------KTQIGTPHYMAPEVWKGRP---- 177 (256)
T ss_pred HHHHHHhhCCcccCCCCcceEEEecC-----CcEEEeeccchhhhccCCc-------ccccCCccccCHHHHCCCC----
Confidence 99999999999999999999999987 7899999999987654311 1345888999999987654
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccccc---ccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN---TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++|+||+|+++|||++|+.||...... ........+..+..++.++++++.+||+.+|++||++.++++
T Consensus 178 --~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 178 --YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 346799999999999999999999764221 112223344555678899999999999999999999999998
No 370
>KOG4250|consensus
Probab=100.00 E-value=6.1e-36 Score=321.36 Aligned_cols=207 Identities=23% Similarity=0.281 Sum_probs=169.0
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
+...+.||+|+||.||+|+++ |+.||||.+++... ....+...+|+++|+++ +|||||
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~----------------~r~~e~~~~EieilkKL----nh~NIV 74 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS----------------LRPRERWCREIEILKKL----NHPNIV 74 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc----------------cchHHHHHHHHHHHHHc----Cchhhh
Confidence 455678999999999999987 99999999854331 22445667899999998 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh--cCCCCHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER--CAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~--~~~l~~~~~~~i~~ql~~g 352 (588)
+++++-++... ........++|||| +|||+..|.+. ...|++.+.+.++.+++.|
T Consensus 75 k~f~iee~~~~----------------------~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~a 132 (732)
T KOG4250|consen 75 KLFDIEETKFL----------------------GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSA 132 (732)
T ss_pred hhcccCCcccc----------------------CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHH
Confidence 99987554321 01122478999999 68999999853 3479999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
|.|||++||+||||||.||++-...++. ..-||+|||+||..+++... ...+||+.|.+||+...+. .
T Consensus 133 l~~LrEn~IvHRDlKP~NIvl~~Gedgq-~IyKLtDfG~Arel~d~s~~------~S~vGT~~YLhPel~E~q~-----~ 200 (732)
T KOG4250|consen 133 LRHLRENGIVHRDLKPGNIVLQIGEDGQ-SIYKLTDFGAARELDDNSLF------TSLVGTEEYLHPELYERQK-----K 200 (732)
T ss_pred HHHHHHcCceeccCCCCcEEEeecCCCc-eEEeeecccccccCCCCCee------eeecCchhhcChHHHhhcc-----C
Confidence 9999999999999999999998765444 57899999999998775422 2688999999999998522 1
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcc
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQ 458 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~ 458 (588)
++.-+|.|||||++||++||..||..
T Consensus 201 y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 201 YTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cCceeehhhhhhHHHHHhccCCCCCc
Confidence 44569999999999999999999954
No 371
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4e-35 Score=296.67 Aligned_cols=256 Identities=20% Similarity=0.276 Sum_probs=191.7
Q ss_pred CeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+|++.+.||+|+||.||+|.+. +..+|||.+.......... +.........+..|+.++... .+|||
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~-------~~~~~~~~~~~~~e~~~l~~~---~~h~~ 70 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKD-------KRERDKSIGDIVSEVTIIKEQ---LRHPN 70 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccc-------cccchHHHHHHHHHHHHHhhc---CCCCC
Confidence 4788899999999999999986 4789999985422111000 000000112334566666543 48999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH---hcCCCCHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE---RCAQLSMHERVLLFTQL 349 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~---~~~~l~~~~~~~i~~ql 349 (588)
|+++++++.+.. ..+++|||+ +++|.+++.. ....+++..++.++.|+
T Consensus 71 i~~~~~~~~~~~----------------------------~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l 122 (269)
T cd08528 71 IVRYYKTFLEND----------------------------RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQM 122 (269)
T ss_pred eeeEEeeEccCC----------------------------eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 999999887632 489999999 5799988854 34479999999999999
Q ss_pred HHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCC
Q psy4039 350 LEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 350 ~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
+.||.|||+ .+|+|+||||+||+++.+ +.++|+|||++........ .....|+..|+|||++.+..
T Consensus 123 ~~~l~~lh~~~~i~H~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~-- 189 (269)
T cd08528 123 VLALRYLHKEKRIVHRDLTPNNIMLGED-----DKVTITDFGLAKQKQPESK------LTSVVGTILYSCPEIVKNEP-- 189 (269)
T ss_pred HHHHHHhccCCceeecCCCHHHEEECCC-----CcEEEecccceeecccccc------cccccCcccCcChhhhcCCC--
Confidence 999999996 789999999999999987 7899999999976544221 12456899999999997644
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc---ccc-ccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY---EVN-ALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~---~~~-~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
.+.++||||||+++|||++|+.||......... ... ..+.....+++++.+++.+||+.||++||++.++.+
T Consensus 190 ----~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 190 ----YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred ----CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 457899999999999999999999663221111 111 112222367899999999999999999999999988
Q ss_pred HHh
Q psy4039 505 VCQ 507 (588)
Q Consensus 505 ~L~ 507 (588)
.+.
T Consensus 266 ~~~ 268 (269)
T cd08528 266 MIS 268 (269)
T ss_pred Hhc
Confidence 553
No 372
>KOG1027|consensus
Probab=100.00 E-value=3.2e-36 Score=327.52 Aligned_cols=268 Identities=24% Similarity=0.354 Sum_probs=202.2
Q ss_pred eeeecccCcee-EEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 201 GKFIAKGTNAV-VYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 201 ~~~IG~G~fG~-Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
.+.+|.|+.|+ ||+|.+.|++||||++- .| ......+||..|+.- -.|||||++|+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll----------------~e----~~~~A~rEi~lL~eS---D~H~NviRyyc 570 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYEGREVAVKRLL----------------EE----FFDFAQREIQLLQES---DEHPNVIRYYC 570 (903)
T ss_pred HHHcccCCCCcEEEEEeeCCceehHHHHh----------------hH----hHHHHHHHHHHHHhc---cCCCceEEEEe
Confidence 46789999986 79999999999999972 11 122346799998876 58999999986
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHH
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQL---SMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l---~~~~~~~i~~ql~~gL~yL 356 (588)
.-.+. ..+||..|.|.++|.+++......+ .....+.++.|+++||+||
T Consensus 571 ~E~d~----------------------------qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL 622 (903)
T KOG1027|consen 571 SEQDR----------------------------QFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL 622 (903)
T ss_pred eccCC----------------------------ceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHH
Confidence 64442 2599999999999999998731111 1144678999999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCc
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 436 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~k 436 (588)
|+.+||||||||.||||+.........++|+|||+|+....+... +. ......||-+|+|||++..... ..+
T Consensus 623 Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS-~~-r~s~~sGt~GW~APE~L~~~~~------~~a 694 (903)
T KOG1027|consen 623 HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS-FS-RLSGGSGTSGWQAPEQLREDRK------TQA 694 (903)
T ss_pred HhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch-hh-cccCCCCcccccCHHHHhcccc------Ccc
Confidence 999999999999999998753334478999999999987765432 11 1336779999999999987753 357
Q ss_pred CchhhHHHHHHHHhcC-CCCCcccccc------ccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhh
Q psy4039 437 SDAWTAGTVAYEIFGH-DNPFYQSARN------TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 437 sDVwS~Gvil~ElltG-~~Pf~~~~~~------~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~ 509 (588)
+||||+||++|..++| .+||...... ..+......+.+.. ++.+||.+|+++||..||++.+++.
T Consensus 695 vDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d~---eA~dLI~~ml~~dP~~RPsa~~VL~----- 766 (903)
T KOG1027|consen 695 VDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPDC---EAKDLISRMLNPDPQLRPSATDVLN----- 766 (903)
T ss_pred cchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCchH---HHHHHHHHhcCCCcccCCCHHHHhC-----
Confidence 8999999999999986 8999875333 33333333222222 8999999999999999999999999
Q ss_pred hhcCCccccCCCCChhHHHHHHHhhhccccccCc
Q psy4039 510 LWAPKHWLYGATPSHNEIMQWLLTLTTKVLCTGV 543 (588)
Q Consensus 510 ~~~~h~w~~~~~~~~~~~~~~l~~~~~~~~~~~~ 543 (588)
||+|= +.+..++.+...+..+.-+.+
T Consensus 767 ----HPlFW----~~ekrL~Fl~dvSDRvE~e~r 792 (903)
T KOG1027|consen 767 ----HPLFW----DSEKRLSFLRDVSDRVEKENR 792 (903)
T ss_pred ----CCccC----ChHHHHHHHHhhhhhhhhhhc
Confidence 88762 334455666666555544444
No 373
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.4e-34 Score=322.54 Aligned_cols=269 Identities=18% Similarity=0.207 Sum_probs=177.1
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHh
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMN 263 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~ 263 (588)
...+..++|++.+.||+|+||.||+|++. +..||||++..... .|+.+..
T Consensus 126 ~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------------------------~e~~~~e 181 (566)
T PLN03225 126 RPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------------------------VEIWMNE 181 (566)
T ss_pred CCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------------------------hHHHHHH
Confidence 34566799999999999999999999986 57899999742110 0111111
Q ss_pred hhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCC------
Q psy4039 264 SVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQ------ 336 (588)
Q Consensus 264 ~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~------ 336 (588)
.+.+ ..+.+++.+...+.... ........++||||+ +++|.+++......
T Consensus 182 ~l~~-~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~ 238 (566)
T PLN03225 182 RVRR-ACPNSCADFVYGFLEPV----------------------SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPY 238 (566)
T ss_pred HHHh-hchhhHHHHHHhhhccc----------------------ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHH
Confidence 1110 02333333222222110 001123589999999 57999998754211
Q ss_pred -------------CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 337 -------------LSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 337 -------------l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
..+..+..++.||+.||.|||+++|+||||||+|||++.+. +.+||+|||+|+....+...
T Consensus 239 l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~----~~~KL~DFGlA~~l~~~~~~-- 312 (566)
T PLN03225 239 LLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGS----GSFKIIDLGAAADLRVGINY-- 312 (566)
T ss_pred hccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCC----CcEEEEeCCCcccccccccc--
Confidence 12334668999999999999999999999999999998642 68999999999865443221
Q ss_pred ccccccccCCccccchhHHhcCCCCc----------------cCCCCCcCchhhHHHHHHHHhcCCCCCccccc------
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLF----------------SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR------ 461 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~----------------~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~------ 461 (588)
......||+.|||||.+....... ...++.++|||||||++|||+++..|+.....
T Consensus 313 --~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l 390 (566)
T PLN03225 313 --IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQL 390 (566)
T ss_pred --CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHH
Confidence 112467999999999775432211 11234568999999999999998777644211
Q ss_pred -cccccc-----cccCC----------CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 462 -NTDYEV-----NALPQ----------LNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 462 -~~~~~~-----~~~~~----------~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
...... ...+. ..+..+....+||.+||+.||.+|||++++++ |||++...+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~---------Hpff~~~~~ 458 (566)
T PLN03225 391 KRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALA---------HPYFDREGL 458 (566)
T ss_pred HhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhC---------CcCcCCCCc
Confidence 000000 00000 01112334569999999999999999999999 999985443
No 374
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.1e-35 Score=293.02 Aligned_cols=226 Identities=19% Similarity=0.205 Sum_probs=177.7
Q ss_pred cCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeeeecc
Q psy4039 207 GTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFTDF 284 (588)
Q Consensus 207 G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~~~ 284 (588)
|.||.||++.+. ++.||+|.+.... ...+|...+... .||||+++++++.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----------------------~~~~~~~~~~~~----~~~~i~~~~~~~~~~ 57 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS----------------------EYSRERLTIIPH----CVPNMVCLHKYIVSE 57 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh----------------------hhhhHHHHHHhc----CCCceeehhhheecC
Confidence 899999999996 7899999985321 111233222222 699999999988763
Q ss_pred CCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q psy4039 285 VPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAH 363 (588)
Q Consensus 285 ~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvH 363 (588)
. ..+++|||+ +|+|.+++.... .+++..+..++.|+++||.|||++||+|
T Consensus 58 ~----------------------------~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H 108 (237)
T cd05576 58 D----------------------------SVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVC 108 (237)
T ss_pred C----------------------------eEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 2 489999999 579999997654 6999999999999999999999999999
Q ss_pred ccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHH
Q psy4039 364 RDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAG 443 (588)
Q Consensus 364 rDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~G 443 (588)
|||||+||+++.+ +.++++|||.+....... ....++..|+|||.+.+.. .+.++||||+|
T Consensus 109 ~dlkp~Nil~~~~-----~~~~l~df~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~DvwslG 169 (237)
T cd05576 109 RDLNPNNILLDDR-----GHIQLTYFSRWSEVEDSC--------DGEAVENMYCAPEVGGISE------ETEACDWWSLG 169 (237)
T ss_pred cCCCHHHEEEcCC-----CCEEEecccchhcccccc--------ccCCcCccccCCcccCCCC------CCchhhHHHHH
Confidence 9999999999987 789999999886554321 1234677899999886544 34679999999
Q ss_pred HHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH-----HHHHHHHhhhhhcCCccc
Q psy4039 444 TVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA-----ELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 444 vil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~-----~e~l~~L~~~~~~~h~w~ 517 (588)
|++|||++|+.|+........ ......++..+++.+++++.+||+.||++||++ +++++ |||+
T Consensus 170 ~il~el~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~---------h~~~ 237 (237)
T cd05576 170 AILFELLTGKTLVECHPSGIN--THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKS---------HPFF 237 (237)
T ss_pred HHHHHHHHCcchhhcCchhcc--cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHc---------CCCC
Confidence 999999999998764322111 111123556788999999999999999999996 77777 9996
No 375
>KOG0696|consensus
Probab=100.00 E-value=3.1e-36 Score=304.36 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=199.8
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEECC--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFRG--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
....+...+|.+..+||+|+||.|..|..+| ..||||++++..+..++ ..+--..|.++|..-
T Consensus 342 ~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD--------------Dvectm~EKrvLAL~- 406 (683)
T KOG0696|consen 342 KRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD--------------DVECTMVEKRVLALP- 406 (683)
T ss_pred cccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC--------------cccceehhhhheecC-
Confidence 4446788899999999999999999999884 57999999764433222 111112355555443
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
.+-|.+++|+.+|+..+ .+|.||||+ +|+|--.+.+-+ ++.+..+..+
T Consensus 407 --~kppFL~qlHScFQTmD----------------------------RLyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFY 455 (683)
T KOG0696|consen 407 --GKPPFLVQLHSCFQTMD----------------------------RLYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFY 455 (683)
T ss_pred --CCCchHHHHHHHhhhhh----------------------------heeeEEEEecCchhhhHHHHhc-ccCCchhhhh
Confidence 46889999999998754 399999999 579988887765 8999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+..|+-||-+||++|||.||||.+|||+|.+ +++||+|||+++.--.+. ..+.++||||.|+|||++..+
T Consensus 456 AaEiaigLFFLh~kgIiYRDLKLDNvmLd~e-----GHiKi~DFGmcKEni~~~-----~TTkTFCGTPdYiAPEIi~Yq 525 (683)
T KOG0696|consen 456 AAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE-----GHIKIADFGMCKENIFDG-----VTTKTFCGTPDYIAPEIIAYQ 525 (683)
T ss_pred hHHHHHHhhhhhcCCeeeeeccccceEeccC-----CceEeeecccccccccCC-----cceeeecCCCcccccceEEec
Confidence 9999999999999999999999999999998 999999999997632211 122378999999999999988
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc--cccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV--NALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~--~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
+ |+..+|+|||||+||||+.|++||.++.....+.. ...-..|..+|.++.++++..|...|.+|..
T Consensus 526 P------YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 526 P------YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred c------cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 8 45678999999999999999999998655443321 2223567889999999999999999999964
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.1e-35 Score=333.24 Aligned_cols=147 Identities=21% Similarity=0.292 Sum_probs=124.4
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
+++|.+.+.||+|+||.||+|.+. ++.||||++........ .....+.+|+.++..+ +||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~--------------~~~~~~~~E~~~l~~l----~hp 64 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINK--------------NMVHQVQAERDALALS----KSP 64 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCH--------------HHHHHHHHHHHHHHhc----CCC
Confidence 489999999999999999999998 88999999854221110 0123455688888776 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
||+++++++.... .+|+||||+ +++|.+++...+ .+++..++.|+.||+.
T Consensus 65 ~Iv~~~~~~~~~~----------------------------~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~ 115 (669)
T cd05610 65 FIVHLYYSLQSAN----------------------------NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVAL 115 (669)
T ss_pred CcCeEEEEEEECC----------------------------EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHH
Confidence 9999998887532 499999999 689999997654 7899999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeecccccc
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 393 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~ 393 (588)
||.|||+++|+||||||+|||++.+ +.+||+|||+++
T Consensus 116 aL~yLH~~gIiHrDLKP~NILl~~~-----g~vkL~DFGls~ 152 (669)
T cd05610 116 ALDYLHRHGIIHRDLKPDNMLISNE-----GHIKLTDFGLSK 152 (669)
T ss_pred HHHHHHhCCEEeCCccHHHEEEcCC-----CCEEEEeCCCCc
Confidence 9999999999999999999999877 789999999986
No 377
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=5.6e-35 Score=291.65 Aligned_cols=242 Identities=25% Similarity=0.383 Sum_probs=193.8
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||.|+||.||++.+. +..||+|.+........ .....+.+|+.+++.+ +||||+++++.+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--------------~~~~~~~~e~~~l~~l----~h~~i~~~~~~~ 62 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR--------------KEVEHTLTERNILSRI----NHPFIVKLHYAF 62 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch--------------HHHHHHHHHHHHHHHc----CCCcHHHHHHHe
Confidence 799999999999987 78999999854321111 0223456788888887 899999999887
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+. ...+++||++ +++|.+++.... .+++..+..++.|+++||.|||+.+
T Consensus 63 ~~~----------------------------~~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 63 QTE----------------------------EKLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred ecC----------------------------CeeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 652 1489999999 789999998764 7899999999999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchh
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAW 440 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVw 440 (588)
++|+||||+||+++.+ +.++|+|||++........ ......|+..|+|||...+.. .+.++|+|
T Consensus 114 ~~H~~l~p~ni~~~~~-----~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~------~~~~~D~~ 177 (250)
T cd05123 114 IIYRDLKPENILLDAD-----GHIKLTDFGLAKELSSEGS-----RTNTFCGTPEYLAPEVLLGKG------YGKAVDWW 177 (250)
T ss_pred ceecCCCcceEEEcCC-----CcEEEeecCcceecccCCC-----cccCCcCCccccChHHhCCCC------CCchhhHH
Confidence 9999999999999987 7899999999877544211 112456888999999987654 34679999
Q ss_pred hHHHHHHHHhcCCCCCcccccccccc--ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH---HHHHHHHhhhhhcCCc
Q psy4039 441 TAGTVAYEIFGHDNPFYQSARNTDYE--VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA---ELAATVCQLYLWAPKH 515 (588)
Q Consensus 441 S~Gvil~ElltG~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~---~e~l~~L~~~~~~~h~ 515 (588)
|||+++|++++|..||.......... ......++..++..+.+++++||..||++||++ +++++ ||
T Consensus 178 slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~---------~~ 248 (250)
T cd05123 178 SLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKA---------HP 248 (250)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHh---------CC
Confidence 99999999999999996543211111 112345667789999999999999999999999 88888 99
Q ss_pred cc
Q psy4039 516 WL 517 (588)
Q Consensus 516 w~ 517 (588)
||
T Consensus 249 ~f 250 (250)
T cd05123 249 FF 250 (250)
T ss_pred CC
Confidence 96
No 378
>KOG0199|consensus
Probab=100.00 E-value=7.6e-36 Score=317.58 Aligned_cols=250 Identities=20% Similarity=0.245 Sum_probs=202.0
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
|..++..+.++||+|+||+|++|.|. ...||||+++..... ....+|.+|+.+|-+|
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~----------------~~mddflrEas~M~~L-- 168 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN----------------AIMDDFLREASHMLKL-- 168 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc----------------hhHHHHHHHHHHHHhc--
Confidence 44566778899999999999999998 357999999643211 1335678899999887
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHH-hcCCCCHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRE-RCAQLSMHERVLL 345 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~-~~~~l~~~~~~~i 345 (588)
+|||+|+|||+..++. +.+|||.+ .|||.+.|++ ....|-......+
T Consensus 169 --~H~hliRLyGvVl~qp-----------------------------~mMV~ELaplGSLldrLrka~~~~llv~~Lcdy 217 (1039)
T KOG0199|consen 169 --QHPHLIRLYGVVLDQP-----------------------------AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDY 217 (1039)
T ss_pred --cCcceeEEeeeeccch-----------------------------hhHHhhhcccchHHHHHhhccccceeHHHHHHH
Confidence 9999999999987632 78999999 5899999998 3446888899999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+.||+.|+.||.+++.|||||-..|||+... ..+||+|||+.|.++.+..+- . ......-...|+|||.+...
T Consensus 218 a~QiA~aM~YLeskrlvHRDLAARNlllasp-----rtVKI~DFGLmRaLg~ned~Y-v-m~p~rkvPfAWCaPEsLrh~ 290 (1039)
T KOG0199|consen 218 AMQIAKAMQYLESKRLVHRDLAARNLLLASP-----RTVKICDFGLMRALGENEDMY-V-MAPQRKVPFAWCAPESLRHR 290 (1039)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhheeccc-----ceeeeecccceeccCCCCcce-E-ecCCCcCcccccCHhHhccc
Confidence 9999999999999999999999999999876 699999999999987644321 1 11122245689999999876
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccccc---cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNT---DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~---~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
. ++.++|||+|||++|||++ |+.||.+..... .+....+-+-+..||+++.+++..||..+|++|||+..
T Consensus 291 k------FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsa 364 (1039)
T KOG0199|consen 291 K------FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSA 364 (1039)
T ss_pred c------ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHH
Confidence 5 5578999999999999998 789998742221 22234444567899999999999999999999999999
Q ss_pred HHH
Q psy4039 502 AAT 504 (588)
Q Consensus 502 ~l~ 504 (588)
+.+
T Consensus 365 ir~ 367 (1039)
T KOG0199|consen 365 IRE 367 (1039)
T ss_pred HHH
Confidence 864
No 379
>KOG0662|consensus
Probab=100.00 E-value=3.2e-35 Score=268.40 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=200.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|+..++||+|.||+||+|+.. +..||+|.++..+.. |.++. ...+||-+++.+ +|.|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldddd------------egvps---salreicllkel----khkn 62 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDD------------EGVPS---SALREICLLKEL----KHKN 62 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCC------------CCCcH---HHHHHHHHHHHh----hhcc
Confidence 45777889999999999999987 789999999754322 11221 235799999998 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
||+++++...+. .+-+|+|||+.+|.+|.....+.++.+.+..++.|+++||
T Consensus 63 ivrl~dvlhsdk----------------------------kltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl 114 (292)
T KOG0662|consen 63 IVRLHDVLHSDK----------------------------KLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGL 114 (292)
T ss_pred eeehhhhhccCc----------------------------eeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhh
Confidence 999999877643 3899999999999999998877999999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|+|++++.||||||.|.||+.+ +.+|++|||+|+.++-... .++ ..+-|..|.+|.++.+..- +
T Consensus 115 ~fchshnvlhrdlkpqnllin~n-----gelkladfglarafgipvr-cys----aevvtlwyrppdvlfgakl-----y 179 (292)
T KOG0662|consen 115 GFCHSHNVLHRDLKPQNLLINRN-----GELKLADFGLARAFGIPVR-CYS----AEVVTLWYRPPDVLFGAKL-----Y 179 (292)
T ss_pred hhhhhhhhhhccCCcceEEeccC-----CcEEecccchhhhcCCceE-eee----ceeeeeeccCcceeeeeeh-----h
Confidence 99999999999999999999988 8999999999998765322 122 3457899999999987652 5
Q ss_pred CCcCchhhHHHHHHHHhc-CCCCCcccccccc----------ccccccCC------------CC---------CCccHHH
Q psy4039 434 YSKSDAWTAGTVAYEIFG-HDNPFYQSARNTD----------YEVNALPQ------------LN---------TNVPEVM 481 (588)
Q Consensus 434 ~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~----------~~~~~~~~------------~~---------~~~~~~l 481 (588)
++..|+||.|||+.|+.. |++.|.+...... .....+|. ++ +.++..-
T Consensus 180 ~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~g 259 (292)
T KOG0662|consen 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTG 259 (292)
T ss_pred ccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchh
Confidence 577899999999999986 6666665211000 01111111 11 1223345
Q ss_pred HHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 482 RRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 482 ~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
+||++++|.-+|.+|++++++++ ||++...
T Consensus 260 rdllqkll~cnp~qrisaeaalq---------hpyf~d~ 289 (292)
T KOG0662|consen 260 RDLLQKLLKCNPAQRISAEAALQ---------HPYFSDF 289 (292)
T ss_pred HHHHHHHhccCcccccCHHHHhc---------Ccccccc
Confidence 89999999999999999999999 9998744
No 380
>KOG0614|consensus
Probab=100.00 E-value=1.9e-36 Score=312.76 Aligned_cols=257 Identities=21% Similarity=0.319 Sum_probs=213.8
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEECCee--EEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFRGVE--YALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~--vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
+...+.+.+++....||-||||.|=.....++. +|+|++++..+... ...+-+-.|-.||..+
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdt--------------kQqeHv~sEr~Im~~~- 477 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDT--------------KQQEHVFSERNIMMEC- 477 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccch--------------hHHHHHHhHHHHHHhc-
Confidence 334567789999999999999999988887554 89998865332211 1223345688888887
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLL 345 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i 345 (588)
+.|.||+||..|.+.. ++|++||-| +|.|-..|++++ .+++..+..+
T Consensus 478 ---~s~fIvrLYrTfrd~k----------------------------yvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~ 525 (732)
T KOG0614|consen 478 ---RSDFIVRLYRTFRDSK----------------------------YVYMLMEACLGGELWTILRDRG-SFDDYTARFY 525 (732)
T ss_pred ---CchHHHHHHHHhccch----------------------------hhhhhHHhhcCchhhhhhhhcC-Ccccchhhhh
Confidence 8999999999988743 499999999 899999999886 8999999999
Q ss_pred HHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 346 FTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 346 ~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
+..+++|++|||++|||.|||||+|.++|.+ +-+||.|||+|+.+..+... -++||||.|.|||++...
T Consensus 526 ~acv~EAfeYLH~k~iIYRDLKPENllLd~~-----Gy~KLVDFGFAKki~~g~KT------wTFcGTpEYVAPEIILnK 594 (732)
T KOG0614|consen 526 VACVLEAFEYLHRKGIIYRDLKPENLLLDNR-----GYLKLVDFGFAKKIGSGRKT------WTFCGTPEYVAPEIILNK 594 (732)
T ss_pred HHHHHHHHHHHHhcCceeccCChhheeeccC-----CceEEeehhhHHHhccCCce------eeecCCcccccchhhhcc
Confidence 9999999999999999999999999999988 89999999999998775432 279999999999999877
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccc----cccCCCCCCccHHHHHHHHHhhhhCCCCCCC---
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEV----NALPQLNTNVPEVMRRLVAKLLENDPSDRPS--- 498 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~----~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps--- 498 (588)
. ...++|.||+|+++|||++|.+||.+......|.. .....+|..++..+.+||+++...+|.+|..
T Consensus 595 G------HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~ 668 (732)
T KOG0614|consen 595 G------HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQK 668 (732)
T ss_pred C------cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhcccc
Confidence 6 34569999999999999999999988655544432 3344677899999999999999999999986
Q ss_pred --HHHHHHHHhhhhhcCCcccc
Q psy4039 499 --AELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 499 --~~e~l~~L~~~~~~~h~w~~ 518 (588)
..++-. |.||.
T Consensus 669 ~gI~DIkk---------H~Wf~ 681 (732)
T KOG0614|consen 669 GGINDIKK---------HRWFE 681 (732)
T ss_pred CChHHHHh---------hhhhh
Confidence 667666 88876
No 381
>KOG0608|consensus
Probab=100.00 E-value=8.2e-35 Score=306.60 Aligned_cols=260 Identities=20% Similarity=0.239 Sum_probs=197.6
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
..+..-|..++.||-|+||.|.++.-. ...||.|.+++.+.- ++. ...-+..|-.||..-
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl------~rn--------QvaHVKAERDILAEA---- 686 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVL------MRN--------QVAHVKAERDILAEA---- 686 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHH------hhh--------hhhhhhhhhhhHhhc----
Confidence 344467999999999999999988754 567888887643211 110 111234577888886
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
..+-||+||..|+|++ ++|+||+|. +|++-.+|-..+ .|.|..++.++..
T Consensus 687 Dn~WVVrLyySFQDkd----------------------------nLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAE 737 (1034)
T KOG0608|consen 687 DNEWVVRLYYSFQDKD----------------------------NLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAE 737 (1034)
T ss_pred CCcceEEEEEEeccCC----------------------------ceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHH
Confidence 8999999999999854 599999999 789998887765 8999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC---------CCcc-----ccc----------
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS---------GLSM-----QYS---------- 404 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~---------~~~~-----~~~---------- 404 (588)
+..|+++.|..|+|||||||+|||||.+ +++||+|||+|.-+.. +... ..+
T Consensus 738 ltcAiesVHkmGFIHRDiKPDNILIDrd-----GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~l 812 (1034)
T KOG0608|consen 738 LTCAIESVHKMGFIHRDIKPDNILIDRD-----GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCL 812 (1034)
T ss_pred HHHHHHHHHhccceecccCccceEEccC-----CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccc
Confidence 9999999999999999999999999999 9999999999964321 1000 000
Q ss_pred -------------cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc------cccc
Q psy4039 405 -------------SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR------NTDY 465 (588)
Q Consensus 405 -------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~------~~~~ 465 (588)
...-..+||+.|+|||++.... ++..||+||.|||||||+.|++||..+.. ...+
T Consensus 813 kvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g------~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 813 KVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG------YTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred hHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC------ccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeeh
Confidence 0011346999999999997665 44679999999999999999999976422 2223
Q ss_pred cccccCCCCCCccHHHHHHHHHhhhhCCCCCCC---HHHHHHHHhhhhhcCCccccC
Q psy4039 466 EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPS---AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 466 ~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps---~~e~l~~L~~~~~~~h~w~~~ 519 (588)
..........+++.++.++|.+++. ++++|.. ++++.+ ||||+.
T Consensus 887 ~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKa---------HpfFkg 933 (1034)
T KOG0608|consen 887 RNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKA---------HPFFKG 933 (1034)
T ss_pred hhccccccccccCHHHHHHHHHHhc-Chhhhhcccchhhhhc---------Cccccc
Confidence 3333333456789999999998663 6778864 666777 999983
No 382
>KOG1006|consensus
Probab=100.00 E-value=2.5e-36 Score=290.81 Aligned_cols=262 Identities=21% Similarity=0.216 Sum_probs=201.7
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
...+++.-++++-...||.|+||+|+|-.++ |+..|||+|+..... . ..+++..|.+...+-
T Consensus 56 ~~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~----k------------eq~rll~e~d~~mks 119 (361)
T KOG1006|consen 56 AHLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE----K------------EQKRLLMEHDTVMKS 119 (361)
T ss_pred ccccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch----H------------HHHHHHHHHHHHHhh
Confidence 3456777788999999999999999999998 899999999743321 1 223344455543322
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHH----hcCCCCHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRE----RCAQLSMHE 341 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~----~~~~l~~~~ 341 (588)
.+.||||++||.+..+ |. .|+.||.|+-||+.+-+. +...++|..
T Consensus 120 ---~~cp~IVkfyGa~F~E-----------------------Gd-----cWiCMELMd~SlDklYk~vy~vq~~~ipE~I 168 (361)
T KOG1006|consen 120 ---SNCPNIVKFYGALFSE-----------------------GD-----CWICMELMDISLDKLYKRVYSVQKSRIPENI 168 (361)
T ss_pred ---cCCcHHHHHhhhhhcC-----------------------Cc-----eeeeHHHHhhhHHHHHHHHHHHHhccCcHhh
Confidence 4899999999987753 33 899999999888776542 234799999
Q ss_pred HHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchh
Q psy4039 342 RVLLFTQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPE 420 (588)
Q Consensus 342 ~~~i~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE 420 (588)
.-.|....+.||.||-+ ..|||||+||+|||+|.. +.+||||||.|-.+.... ..+.-.|-..|||||
T Consensus 169 lg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~-----G~vKLCDFGIcGqLv~Si------AkT~daGCrpYmAPE 237 (361)
T KOG1006|consen 169 LGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH-----GDVKLCDFGICGQLVDSI------AKTVDAGCRPYMAPE 237 (361)
T ss_pred hhheeeeehhHHHHHHHHhhhhhccCChhheEEecC-----CCEeeecccchHhHHHHH------HhhhccCCccccChh
Confidence 99999999999999997 599999999999999988 899999999997654321 122456888999999
Q ss_pred HHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc----ccccccCCC-----CCCccHHHHHHHHHhhhh
Q psy4039 421 VALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD----YEVNALPQL-----NTNVPEVMRRLVAKLLEN 491 (588)
Q Consensus 421 ~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~----~~~~~~~~~-----~~~~~~~l~~Li~~~L~~ 491 (588)
.+...... +.-+|||||+|++|||+.||..||..+..... ......|.+ ...++..+..+|..||.+
T Consensus 238 Ri~p~~~g----yDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~K 313 (361)
T KOG1006|consen 238 RIDPSDKG----YDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIK 313 (361)
T ss_pred ccCCccCC----cchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhc
Confidence 99755432 45689999999999999999999977532111 111111111 134678899999999999
Q ss_pred CCCCCCCHHHHHHHHhhhhhcCCccccCC
Q psy4039 492 DPSDRPSAELAATVCQLYLWAPKHWLYGA 520 (588)
Q Consensus 492 dP~~Rps~~e~l~~L~~~~~~~h~w~~~~ 520 (588)
|-.+||..++++. +|+++..
T Consensus 314 d~~~Rpky~~Lk~---------~~fyr~y 333 (361)
T KOG1006|consen 314 DRSDRPKYDDLKK---------FPFYRMY 333 (361)
T ss_pred ccccCcchhhhhc---------Cchhhhh
Confidence 9999999999988 9998833
No 383
>KOG0587|consensus
Probab=100.00 E-value=4e-34 Score=312.50 Aligned_cols=262 Identities=23% Similarity=0.324 Sum_probs=209.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+-|++.+.||+|.+|.||+++.+ ++..|||++.... + ..+....|.+|++.. ..|||
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d---------------~deEiE~eynil~~~---~~hpn 77 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---D---------------EEEEIELEYNMLKKY---SHHPN 77 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---c---------------ccHHHHHHHHHHHhc---cCCCC
Confidence 77899999999999999998886 8899999984311 1 222334466677665 68999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER-CAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~-~~~l~~~~~~~i~~ql~~ 351 (588)
++.+||+|.-..+ +..+.+|+||||| +||.-++++.. +..+.|..+.-|++.++.
T Consensus 78 v~~fyg~~~k~~~-----------------------~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lr 134 (953)
T KOG0587|consen 78 VATFYGAFIKKDP-----------------------GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILR 134 (953)
T ss_pred cceEEEEEEEecC-----------------------CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHH
Confidence 9999999987542 2234699999999 58999999864 558999999999999999
Q ss_pred HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccC
Q psy4039 352 GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSF 431 (588)
Q Consensus 352 gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 431 (588)
||.|||.+.++|||||-.|||++.+ +.+||+|||.+.....+.... .+..|||.|||||++..... .+.
T Consensus 135 gl~HLH~nkviHRDikG~NiLLT~e-----~~VKLvDFGvSaQldsT~grR-----nT~iGtP~WMAPEViac~e~-~d~ 203 (953)
T KOG0587|consen 135 GLAHLHNNKVIHRDIKGQNVLLTEN-----AEVKLVDFGVSAQLDSTVGRR-----NTFIGTPYWMAPEVIACDES-PDA 203 (953)
T ss_pred HHHHHhhcceeeecccCceEEEecc-----CcEEEeeeeeeeeeecccccc-----cCcCCCcccccceeeecccC-CCC
Confidence 9999999999999999999999998 899999999998876643322 25789999999999976543 222
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccc-cccc--ccCCC--CCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-YEVN--ALPQL--NTNVPEVMRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-~~~~--~~~~~--~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
.+...||+||+|++..||.-|.+|+.+...... +... ..|.+ |..++.++.++|..||.+|-++||++.+++.
T Consensus 204 tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~-- 281 (953)
T KOG0587|consen 204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK-- 281 (953)
T ss_pred CcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc--
Confidence 255679999999999999999999987533222 1111 11111 4567889999999999999999999999888
Q ss_pred hhhhhcCCccccCCC
Q psy4039 507 QLYLWAPKHWLYGAT 521 (588)
Q Consensus 507 ~~~~~~~h~w~~~~~ 521 (588)
|||++...
T Consensus 282 -------hpFi~e~~ 289 (953)
T KOG0587|consen 282 -------HPFITEQP 289 (953)
T ss_pred -------CCcccccc
Confidence 99998443
No 384
>KOG0200|consensus
Probab=100.00 E-value=4.9e-34 Score=321.00 Aligned_cols=257 Identities=23% Similarity=0.320 Sum_probs=209.6
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC---------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHH
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR---------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDM 260 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~---------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~ 260 (588)
.|++.-+++++.+.||+|.||.|++|... ...||||+++..... ...+.+..|++
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~----------------~~~~~~~~El~ 353 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS----------------SEKKDLMSELN 353 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc----------------HHHHHHHHHHH
Confidence 68888888899999999999999999875 357999998643222 13456677999
Q ss_pred HHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc-----
Q psy4039 261 LMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC----- 334 (588)
Q Consensus 261 il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~----- 334 (588)
+|+.+ ..|||||.++|+|.... .+++|+||+ .|+|.+||+.++
T Consensus 354 ~m~~~---g~H~niv~llG~~t~~~----------------------------~~~~v~Ey~~~G~L~~~Lr~~r~~~~~ 402 (609)
T KOG0200|consen 354 VLKEL---GKHPNIVNLLGACTQDG----------------------------PLYVIVEYAEHGDLLEFLRKKRVTESI 402 (609)
T ss_pred HHHHh---cCCcchhhheeeeccCC----------------------------ceEEEEEeccCCcHHHHHHhccccccc
Confidence 99998 78999999999998732 299999999 699999999875
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccc
Q psy4039 335 ----------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYS 404 (588)
Q Consensus 335 ----------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 404 (588)
..++..+.+.++.||+.|++||++.++|||||-++|||+..+ ..+||+|||+|+...........
T Consensus 403 ~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~-----~~~kIaDFGlar~~~~~~~y~~~ 477 (609)
T KOG0200|consen 403 DGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN-----KVIKIADFGLARDHYNKDYYRTK 477 (609)
T ss_pred cccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC-----CEEEEccccceeccCCCCceEec
Confidence 349999999999999999999999999999999999999988 79999999999965442221101
Q ss_pred cccccccC--CccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCccccc----cccccccccCCCCCCc
Q psy4039 405 SADIELGG--NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSAR----NTDYEVNALPQLNTNV 477 (588)
Q Consensus 405 ~~~~~~~G--T~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~----~~~~~~~~~~~~~~~~ 477 (588)
...| ...|||||.+.... ++.|+|||||||+||||++ |..||.+-.. -.....+.+...|..|
T Consensus 478 ----~~~~~LP~kWmApEsl~~~~------ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c 547 (609)
T KOG0200|consen 478 ----SSAGTLPVKWMAPESLFDRV------FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHC 547 (609)
T ss_pred ----CCCCccceeecCHHHhccCc------ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCC
Confidence 1112 33599999997644 6689999999999999998 7889876210 1123345566778899
Q ss_pred cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhh
Q psy4039 478 PEVMRRLVAKLLENDPSDRPSAELAATVCQL 508 (588)
Q Consensus 478 ~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~ 508 (588)
++++.++|+.||+.+|++||++.++.+.+..
T Consensus 548 ~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 548 SDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 9999999999999999999999999987775
No 385
>KOG1151|consensus
Probab=100.00 E-value=6.6e-35 Score=296.76 Aligned_cols=265 Identities=23% Similarity=0.266 Sum_probs=205.0
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
-++|-+..+||+|||+.||+|.+. .+.||||+-... .+ ++...+|- ..+-..+|..|.+.| .||
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN---K~----WrdEKKeN---YhKHAcREyrIHKeL----DHp 527 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN---KN----WRDEKKEN---YHKHACREYRIHKEL----DHP 527 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhc---cc----hhhHhhhh---HHHHHHHHHhhhhcc----Ccc
Confidence 377999999999999999999987 788999985321 11 11112221 223446788888887 999
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLE 351 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~ 351 (588)
.||++|++|.-+ +.+++-|+|||.| +|+-||+.+. -+++.++..|+.||+.
T Consensus 528 RIVKlYDyfslD---------------------------tdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVn 579 (775)
T KOG1151|consen 528 RIVKLYDYFSLD---------------------------TDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVN 579 (775)
T ss_pred eeeeeeeeeeec---------------------------cccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHH
Confidence 999999999753 2358999999965 8999998774 7899999999999999
Q ss_pred HHHHHHhC--CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCc-----cccccccccccCCccccchhHHhc
Q psy4039 352 GVTHLNMH--RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS-----MQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 352 gL~yLH~~--~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~-----~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
||.||.+. .|||-||||.|||+.+. ..|+.+||+|||+++..+.... +..++ ...||.+|++||.+.-
T Consensus 580 AL~YLNEikpPIIHYDLKPgNILLv~G--tacGeIKITDFGLSKIMdddSy~~vdGmeLTS---QgAGTYWYLPPEcFvV 654 (775)
T KOG1151|consen 580 ALKYLNEIKPPIIHYDLKPGNILLVNG--TACGEIKITDFGLSKIMDDDSYNSVDGMELTS---QGAGTYWYLPPECFVV 654 (775)
T ss_pred HHHHHhccCCCeeeeccCCccEEEecC--cccceeEeeecchhhhccCCccCcccceeeec---ccCceeeecCcceeec
Confidence 99999975 89999999999999865 4569999999999998655322 22222 4679999999998864
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccccc---------ccccCCCCCCccHHHHHHHHHhhhhCCCC
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE---------VNALPQLNTNVPEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~l~~Li~~~L~~dP~~ 495 (588)
...+. ..+.|+||||+|||+|.++.|+.||.......++. ....| ..+.++.+++++|++||+..-++
T Consensus 655 gkePP--KIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP-~KPvVsseAkaFIRRCLaYRKeD 731 (775)
T KOG1151|consen 655 GKEPP--KISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFP-PKPVVSSEAKAFIRRCLAYRKED 731 (775)
T ss_pred CCCCC--ccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCC-CCCccCHHHHHHHHHHHHhhhhh
Confidence 42211 14578999999999999999999998753322211 11222 23468899999999999999999
Q ss_pred CCCHHHHHHHHhhhhhcCCcccc
Q psy4039 496 RPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 496 Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
|....++.. ||++.
T Consensus 732 R~DV~qLA~---------dpyll 745 (775)
T KOG1151|consen 732 RIDVQQLAC---------DPYLL 745 (775)
T ss_pred hhhHHHHcc---------Ccccc
Confidence 999999888 88875
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.7e-33 Score=304.64 Aligned_cols=285 Identities=17% Similarity=0.165 Sum_probs=192.8
Q ss_pred cccccCCeEEeeeecccCceeEEEEEE------------------CCeeEEEEEEecCCCCcchHHHHHHHhhhhcc--c
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATF------------------RGVEYALKMMFNYSAASNSHAILKAMSKELLP--L 250 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~------------------~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~--~ 250 (588)
..+..++|++.++||+|+||+||+|.+ .++.||||.+.... ......|.++... .
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~-----~~~~~~fl~e~~~~~~ 214 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR-----QGVRQDFLKTGTLAKG 214 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccc-----hhhHHHHHhhhhhhhc
Confidence 345678999999999999999999975 15679999984321 1122333333211 1
Q ss_pred ccchhhhHHHHHhhhcCC-CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHH
Q psy4039 251 RKPLRLNEDMLMNSVENL-PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRN 328 (588)
Q Consensus 251 ~~~~~~~Ei~il~~l~~l-~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~ 328 (588)
..+....|+.++.++.+. ..|+++++++++|..... .|.......++||||+ +++|.+
T Consensus 215 ~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~--------------------~g~~~~~~~~LV~Ey~~~gsL~~ 274 (507)
T PLN03224 215 SAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTA--------------------DGAFTKGSQWLVWKFESDATLGD 274 (507)
T ss_pred ccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccc--------------------cccccCCceEEEEEcCCCCcHHH
Confidence 233445577777766211 123344677777764211 0222334589999999 689999
Q ss_pred HHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCcee
Q psy4039 329 YLRERC-----------------------AQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLV 385 (588)
Q Consensus 329 ~L~~~~-----------------------~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vk 385 (588)
+++... ..+++..+..++.|++.||.|||+++|+||||||+|||++.+ +.+|
T Consensus 275 ~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~-----~~~k 349 (507)
T PLN03224 275 ALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD-----GQVK 349 (507)
T ss_pred HHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC-----CcEE
Confidence 987421 134677889999999999999999999999999999999987 7899
Q ss_pred eeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc----------------cCCCCCcCchhhHHHHHHHH
Q psy4039 386 ITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF----------------SFVNYSKSDAWTAGTVAYEI 449 (588)
Q Consensus 386 L~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~----------------~~~~~~ksDVwS~Gvil~El 449 (588)
|+|||+++....+.... .....+|+.|+|||.+....... ......+.||||+||++|+|
T Consensus 350 L~DFGla~~~~~~~~~~----~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em 425 (507)
T PLN03224 350 IIDFGAAVDMCTGINFN----PLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM 425 (507)
T ss_pred EEeCcCccccccCCccC----ccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence 99999997654322111 11233588999999986432100 00012357999999999999
Q ss_pred hcCCC-CCccc------ccccc-----c---c-ccccCCCCCCccHHHHHHHHHhhhhCC---CCCCCHHHHHHHHhhhh
Q psy4039 450 FGHDN-PFYQS------ARNTD-----Y---E-VNALPQLNTNVPEVMRRLVAKLLENDP---SDRPSAELAATVCQLYL 510 (588)
Q Consensus 450 ltG~~-Pf~~~------~~~~~-----~---~-~~~~~~~~~~~~~~l~~Li~~~L~~dP---~~Rps~~e~l~~L~~~~ 510 (588)
++|.. ||.+. ..... + . ........+.+++..+||+.+||..+| .+|+|++|+++
T Consensus 426 ~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~------ 499 (507)
T PLN03224 426 CVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS------ 499 (507)
T ss_pred HhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC------
Confidence 99875 66431 00000 0 0 011112345678999999999999766 68999999999
Q ss_pred hcCCcccc
Q psy4039 511 WAPKHWLY 518 (588)
Q Consensus 511 ~~~h~w~~ 518 (588)
||||.
T Consensus 500 ---Hp~f~ 504 (507)
T PLN03224 500 ---HRFFL 504 (507)
T ss_pred ---CCCcC
Confidence 99995
No 387
>KOG0671|consensus
Probab=100.00 E-value=4.4e-34 Score=288.04 Aligned_cols=259 Identities=23% Similarity=0.285 Sum_probs=195.6
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC-C-
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP-P- 270 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~-~- 270 (588)
.++|.+...+|+|.||.|-.|.+. +..||||+|++ ..+ -++...-|+.+++++..-- .
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-------------V~k-----YreAa~iEi~vLqki~~~DP~g 149 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-------------VDK-----YREAALIEIEVLQKINESDPNG 149 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-------------HHH-----HhhHHHHHHHHHHHHHhcCCCC
Confidence 488999999999999999999987 67999999843 111 2233445899999883211 1
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh-cCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER-CAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~-~~~l~~~~~~~i~~ql 349 (588)
---+|++.+||.- .++.++|+|.++-|+.++|..+ -.+++..++..+++|+
T Consensus 150 ~~rcv~m~~wFdy----------------------------rghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 150 KFRCVQMRDWFDY----------------------------RGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred ceEEEeeehhhhc----------------------------cCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHH
Confidence 1146778777754 2359999999999999999975 3478999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCC---------------CCCCCceeeeccccccccCCCCccccccccccccCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSE---------------DNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNV 414 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~---------------~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~ 414 (588)
+++++|||+.+++|-||||+|||+.+.. ......++|+|||.|....... ...+.|.
T Consensus 202 ~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTR 273 (415)
T KOG0671|consen 202 LESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTR 273 (415)
T ss_pred HHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeecc
Confidence 9999999999999999999999986543 1113578999999998755432 2567899
Q ss_pred cccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc--------------------cc---cc-c--cc
Q psy4039 415 ALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR--------------------NT---DY-E--VN 468 (588)
Q Consensus 415 ~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~--------------------~~---~~-~--~~ 468 (588)
.|.|||++.+.+ ++.+|||||+||||+|+.+|...|+.... .. .+ . ..
T Consensus 274 HYRAPEViLgLG------wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rl 347 (415)
T KOG0671|consen 274 HYRAPEVILGLG------WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRL 347 (415)
T ss_pred ccCCchheeccC------cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccc
Confidence 999999999887 55789999999999999999999876210 00 00 0 00
Q ss_pred ccCC--------------CC-----CCc---cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccCCCC
Q psy4039 469 ALPQ--------------LN-----TNV---PEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYGATP 522 (588)
Q Consensus 469 ~~~~--------------~~-----~~~---~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~~~~ 522 (588)
.+++ .+ ... -.++.||+++||..||.+|+|+.||+. ||||+...+
T Consensus 348 dw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~---------HpFF~~~~~ 414 (415)
T KOG0671|consen 348 DWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS---------HPFFARLTP 414 (415)
T ss_pred cCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc---------CHHhhcCCC
Confidence 0000 00 000 124789999999999999999999999 999975543
No 388
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7.1e-33 Score=329.46 Aligned_cols=236 Identities=17% Similarity=0.209 Sum_probs=178.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
..+...+.||+|+||.||+|.+. +..||||.+.... .....|+.+++++ +|||
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------------------~~~~~~~~~l~~l----~Hpn 744 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN---------------------SIPSSEIADMGKL----QHPN 744 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc---------------------cccHHHHHHHhhC----CCCC
Confidence 45667789999999999999975 8899999984211 1112357777776 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||+++++|.+.. ..|+||||+ +|+|.++++ .++|.++..|+.|+++|
T Consensus 745 Iv~~~~~~~~~~----------------------------~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 745 IVKLIGLCRSEK----------------------------GAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKA 792 (968)
T ss_pred cceEEEEEEcCC----------------------------CCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHH
Confidence 999999998632 279999999 689999995 58999999999999999
Q ss_pred HHHHH---hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 353 VTHLN---MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 353 L~yLH---~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
|+||| +.+|+||||||+||+++.+ ...++. ||.+...... ....||+.|||||++.+..
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~-----~~~~~~-~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~--- 854 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGK-----DEPHLR-LSLPGLLCTD---------TKCFISSAYVAPETRETKD--- 854 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCC-----CceEEE-eccccccccC---------CCccccccccCcccccCCC---
Confidence 99999 6699999999999999977 455554 6654332111 1236889999999987654
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc--------------ccccccCCC------CCCccHHHHHHHHHhh
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------------YEVNALPQL------NTNVPEVMRRLVAKLL 489 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--------------~~~~~~~~~------~~~~~~~l~~Li~~~L 489 (588)
++.++|||||||++|||++|+.||........ ......+.+ +.....++.+++.+||
T Consensus 855 ---~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl 931 (968)
T PLN00113 855 ---ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCT 931 (968)
T ss_pred ---CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhC
Confidence 55789999999999999999999854211100 000001111 1112335778999999
Q ss_pred hhCCCCCCCHHHHHHHHhhh
Q psy4039 490 ENDPSDRPSAELAATVCQLY 509 (588)
Q Consensus 490 ~~dP~~Rps~~e~l~~L~~~ 509 (588)
+.||++|||++++++.|+..
T Consensus 932 ~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 932 ATDPTARPCANDVLKTLESA 951 (968)
T ss_pred cCCchhCcCHHHHHHHHHHh
Confidence 99999999999999987754
No 389
>KOG1025|consensus
Probab=100.00 E-value=1.8e-33 Score=303.98 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=210.7
Q ss_pred CeEEeeeecccCceeEEEEEEC------CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFR------GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~------g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
.++..++||+|+||+||+|.|- .-+||||++...... .....+.+|+-+|..+ +
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~----------------~~s~e~LdeAl~masl----d 756 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP----------------KASIELLDEALRMASL----D 756 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc----------------hhhHHHHHHHHHHhcC----C
Confidence 3455779999999999999996 568999998532222 1344566788888887 9
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
|||+++|+++|... .+.||++|+ .|+|.+|++.++..+-....+.|..||
T Consensus 757 Hpnl~RLLgvc~~s-----------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QI 807 (1177)
T KOG1025|consen 757 HPNLLRLLGVCMLS-----------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQI 807 (1177)
T ss_pred CchHHHHhhhcccc-----------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHH
Confidence 99999999998763 277899999 599999999987799999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
++||.|||++++|||||-.+|||+.+- ..+||+|||+|+.+..... .++.. ...-.+.|||=|.+....
T Consensus 808 AkgM~YLe~qrlVHrdLaaRNVLVksP-----~hvkitdfgla~ll~~d~~-ey~~~--~gK~pikwmale~i~~~~--- 876 (1177)
T KOG1025|consen 808 AKGMKYLEEQRLVHRDLAARNVLVKSP-----NHVKITDFGLAKLLAPDEK-EYSAP--GGKVPIKWMALESIRIRK--- 876 (1177)
T ss_pred HHHHHHHHhcchhhhhhhhhheeecCC-----CeEEEEecchhhccCcccc-ccccc--ccccCcHHHHHHHhhccC---
Confidence 999999999999999999999999876 7999999999998766322 12211 112355789999887665
Q ss_pred cCCCCCcCchhhHHHHHHHHhc-CCCCCcccccc---ccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARN---TDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
++.++|||||||++||++| |..|+.+.... ..++...+-+-|+.++-++.-+|.+||..|+..||+++++.+.
T Consensus 877 ---~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 877 ---YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred ---CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 5678999999999999998 88999874222 2233444455678899999999999999999999999999999
Q ss_pred HhhhhhcCCcccc
Q psy4039 506 CQLYLWAPKHWLY 518 (588)
Q Consensus 506 L~~~~~~~h~w~~ 518 (588)
...+...|+-++.
T Consensus 954 fs~~ardpqryl~ 966 (1177)
T KOG1025|consen 954 FSRMARDPQRYLV 966 (1177)
T ss_pred HHHHhcCcceEee
Confidence 8888888888775
No 390
>KOG0695|consensus
Probab=100.00 E-value=2.2e-33 Score=277.38 Aligned_cols=248 Identities=20% Similarity=0.302 Sum_probs=196.4
Q ss_pred CCccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhh
Q psy4039 188 PDVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSV 265 (588)
Q Consensus 188 ~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l 265 (588)
...|.+.+++|.+..+||+|+|++|..++++ .+.||+|++++.-. .+-. ...-...|..+....
T Consensus 242 ~~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~------------ndde--didwvqtek~vfe~a 307 (593)
T KOG0695|consen 242 KISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV------------NDDE--DIDWVQTEKHVFEQA 307 (593)
T ss_pred ccccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc------------CCcc--cchhHHhhHHHHHhc
Confidence 4667888999999999999999999999987 78899999854221 1111 111123455555544
Q ss_pred cCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHH
Q psy4039 266 ENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVL 344 (588)
Q Consensus 266 ~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~ 344 (588)
.+||.+|-++.+|+... .+|.|.||. +|+|--.+..++ +++++.+..
T Consensus 308 ---sn~pflvglhscfqtes----------------------------rlffvieyv~ggdlmfhmqrqr-klpeeharf 355 (593)
T KOG0695|consen 308 ---SNNPFLVGLHSCFQTES----------------------------RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARF 355 (593)
T ss_pred ---cCCCeEEehhhhhcccc----------------------------eEEEEEEEecCcceeeehhhhh-cCcHHHhhh
Confidence 68999999999998753 399999999 578877776654 899999999
Q ss_pred HHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeecccccccc-CCCCccccccccccccCCccccchhHHh
Q psy4039 345 LFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN-KSGLSMQYSSADIELGGNVALMAPEVAL 423 (588)
Q Consensus 345 i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~-~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 423 (588)
+...|+-||.|||++|||.||||.+|||+|.. +.+||+|+|+|+.- ..+. .+.++||||.|+|||++.
T Consensus 356 ys~ei~lal~flh~rgiiyrdlkldnvlldae-----ghikltdygmcke~l~~gd------~tstfcgtpnyiapeilr 424 (593)
T KOG0695|consen 356 YSAEICLALNFLHERGIIYRDLKLDNVLLDAE-----GHIKLTDYGMCKEGLGPGD------TTSTFCGTPNYIAPEILR 424 (593)
T ss_pred hhHHHHHHHHHHhhcCeeeeeccccceEEccC-----CceeecccchhhcCCCCCc------ccccccCCCcccchhhhc
Confidence 99999999999999999999999999999998 99999999999763 2221 123799999999999999
Q ss_pred cCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc-ccc-----ccc----cccccCCCCCCccHHHHHHHHHhhhhCC
Q psy4039 424 ATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS-ARN-----TDY----EVNALPQLNTNVPEVMRRLVAKLLENDP 493 (588)
Q Consensus 424 ~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~-~~~-----~~~----~~~~~~~~~~~~~~~l~~Li~~~L~~dP 493 (588)
+..+. ..+|+|++||+++||+.|+.||.-- ..+ .+| .......+|..++-.+..+++..|++||
T Consensus 425 geeyg------fsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp 498 (593)
T KOG0695|consen 425 GEEYG------FSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDP 498 (593)
T ss_pred ccccC------ceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCc
Confidence 98844 5599999999999999999999641 111 111 1233345677888888999999999999
Q ss_pred CCCCC
Q psy4039 494 SDRPS 498 (588)
Q Consensus 494 ~~Rps 498 (588)
.+|..
T Consensus 499 ~erlg 503 (593)
T KOG0695|consen 499 KERLG 503 (593)
T ss_pred HHhcC
Confidence 99964
No 391
>KOG0665|consensus
Probab=99.98 E-value=1e-32 Score=272.34 Aligned_cols=252 Identities=23% Similarity=0.279 Sum_probs=195.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+|.-...+|.|.- .|..+.+. +++||+|.+... ..+ ....+...+|..+|..+ .|+|
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p--f~n-------------~~~akra~rel~l~~~v----~~~n 76 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP--FQN-------------QTHAKRAYRELKLMKCV----NHKN 76 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc--ccc-------------Cccchhhhhhhhhhhhh----cccc
Confidence 67888899999998 77777765 899999997321 111 22344556799999887 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
||+++.+|+... ....-..+|+|||++..+|.+.+.. .++-+....|+.|++.|+
T Consensus 77 ii~l~n~ftP~~----------------------~l~~~~e~y~v~e~m~~nl~~vi~~---elDH~tis~i~yq~~~~i 131 (369)
T KOG0665|consen 77 IISLLNVFTPQK----------------------TLEEFQEVYLVMELMDANLCQVILM---ELDHETISYILYQMLCGI 131 (369)
T ss_pred eeeeeeccCccc----------------------cHHHHHhHHHHHHhhhhHHHHHHHH---hcchHHHHHHHHHHHHHH
Confidence 999999998643 1122335999999999999999884 688899999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.||+||||||+||++..+ ..+||.|||+|+...... ..+..+.|..|.|||++.+.. +
T Consensus 132 k~lhs~~IihRdLkPsnivv~~~-----~~lKi~dfg~ar~e~~~~------~mtpyVvtRyyrapevil~~~------~ 194 (369)
T KOG0665|consen 132 KHLHSAGIIHRDLKPSNIVVNSD-----CTLKILDFGLARTEDTDF------MMTPYVVTRYYRAPEVILGMG------Y 194 (369)
T ss_pred HHHHhcceeecccCcccceecch-----hheeeccchhhcccCccc------ccCchhheeeccCchheeccC------C
Confidence 99999999999999999999988 899999999998765431 123577899999999998765 4
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCcccccccc--------------------------------ccc---------cccC-
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------------------------------YEV---------NALP- 471 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--------------------------------~~~---------~~~~- 471 (588)
.+.+||||+||++.||++|..-|.+...... +.. ...+
T Consensus 195 ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~ 274 (369)
T KOG0665|consen 195 KENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPV 274 (369)
T ss_pred cccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccc
Confidence 5779999999999999999998876210000 000 0000
Q ss_pred --CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 472 --QLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 472 --~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
+.+..-+..+++|+.+||..||++|.|++++|. ||+++
T Consensus 275 ~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~---------HPY~~ 314 (369)
T KOG0665|consen 275 VLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR---------HPYIK 314 (369)
T ss_pred cccCCccchHHHHHHHHHhhccChhhcccHHHHhc---------CCeee
Confidence 000112345899999999999999999999999 99886
No 392
>KOG0668|consensus
Probab=99.98 E-value=1e-32 Score=260.64 Aligned_cols=253 Identities=18% Similarity=0.225 Sum_probs=195.3
Q ss_pred CccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhc
Q psy4039 189 DVDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 189 ~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~ 266 (588)
..|. ..++|++.+++|+|.|+.||.|... +..++||++++ .+++.+.+|+.||+.|
T Consensus 32 i~wg-~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--------------------VkkkKIkREikIL~nL- 89 (338)
T KOG0668|consen 32 IDWG-NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--------------------VKKKKIKREIKILQNL- 89 (338)
T ss_pred eecc-ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--------------------HHHHHHHHHHHHHHhc-
Confidence 3444 4489999999999999999999864 78999999842 3556788999999988
Q ss_pred CCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 267 NLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 267 ~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
..|||||+|+++..|+. .....+++|+.+..=...|.. .|+...+..++
T Consensus 90 --~gg~NIi~L~DiV~Dp~--------------------------SktpaLiFE~v~n~Dfk~ly~---tl~d~dIryY~ 138 (338)
T KOG0668|consen 90 --RGGPNIIKLLDIVKDPE--------------------------SKTPSLIFEYVNNTDFKQLYP---TLTDYDIRYYI 138 (338)
T ss_pred --cCCCCeeehhhhhcCcc--------------------------ccCchhHhhhhccccHHHHhh---hhchhhHHHHH
Confidence 57999999999988743 123678899995432333332 68888999999
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
.++++||.|+|++||.|||+||.|++||... -.++|+|+|+|-....+.... ..+.+..|--||++..-.
T Consensus 139 ~elLkALdyCHS~GImHRDVKPhNvmIdh~~----rkLrlIDWGLAEFYHp~~eYn------VRVASRyfKGPELLVdy~ 208 (338)
T KOG0668|consen 139 YELLKALDYCHSMGIMHRDVKPHNVMIDHEL----RKLRLIDWGLAEFYHPGKEYN------VRVASRYFKGPELLVDYQ 208 (338)
T ss_pred HHHHHHHhHHHhcCcccccCCcceeeechhh----ceeeeeecchHhhcCCCceee------eeeehhhcCCchheeech
Confidence 9999999999999999999999999999763 579999999998876654432 345677899999986543
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc--------------------cccccc----------------
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD--------------------YEVNAL---------------- 470 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~--------------------~~~~~~---------------- 470 (588)
. +.-.-|+|||||++..|+..+.||.....+.+ +.....
T Consensus 209 ~-----YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~ 283 (338)
T KOG0668|consen 209 M-----YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWS 283 (338)
T ss_pred h-----ccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHH
Confidence 1 22346999999999999999999865211100 000000
Q ss_pred ----CCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 471 ----PQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 471 ----~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
++...-+++++.||+.++|..|-.+|+|+.|++. ||||.
T Consensus 284 ~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~---------HpyF~ 326 (338)
T KOG0668|consen 284 RFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA---------HPYFA 326 (338)
T ss_pred HhCCccccccCChHHHHHHHHHHhhccccccchHHHhc---------CchHH
Confidence 0111235689999999999999999999999999 99986
No 393
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.4e-31 Score=260.94 Aligned_cols=235 Identities=28% Similarity=0.380 Sum_probs=185.4
Q ss_pred CceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeeeeccC
Q psy4039 208 TNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFTDFV 285 (588)
Q Consensus 208 ~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~ 285 (588)
+||.||+|.+. +..+|+|++....... ..+.+.+|+..++.+ +|+||+++++++...
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----------------~~~~~~~e~~~~~~l----~~~~i~~~~~~~~~~- 59 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK----------------KRERILREISILKKL----KHPNIVRLYDVFEDE- 59 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc----------------HHHHHHHHHHHHHhC----CCCcHHHHHhheeeC-
Confidence 58999999997 5899999985322110 034566788888887 999999999988752
Q ss_pred CCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q psy4039 286 PSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAHR 364 (588)
Q Consensus 286 ~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHr 364 (588)
...+++||+++ ++|.+++.... .+++..+..++.+++.++.|||+.+|+|+
T Consensus 60 ---------------------------~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 111 (244)
T smart00220 60 ---------------------------DKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHR 111 (244)
T ss_pred ---------------------------CEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecC
Confidence 14899999995 59999998764 48999999999999999999999999999
Q ss_pred cCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHH
Q psy4039 365 DLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGT 444 (588)
Q Consensus 365 DLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gv 444 (588)
||+|+||+++.+ +.++|+|||.+....... ......|+..|++||.+.+.. .+.++||||||+
T Consensus 112 ~i~~~ni~~~~~-----~~~~l~d~~~~~~~~~~~------~~~~~~~~~~~~~pE~~~~~~------~~~~~Di~slG~ 174 (244)
T smart00220 112 DLKPENILLDED-----GHVKLADFGLARQLDPGG------LLTTFVGTPEYMAPEVLLGKG------YGKAVDVWSLGV 174 (244)
T ss_pred CcCHHHeEECCC-----CcEEEccccceeeecccc------ccccccCCcCCCCHHHHccCC------CCchhhHHHHHH
Confidence 999999999987 789999999998765432 112456888999999987443 346899999999
Q ss_pred HHHHHhcCCCCCccc-ccccccc---ccccCCCC--CCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccc
Q psy4039 445 VAYEIFGHDNPFYQS-ARNTDYE---VNALPQLN--TNVPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWL 517 (588)
Q Consensus 445 il~ElltG~~Pf~~~-~~~~~~~---~~~~~~~~--~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~ 517 (588)
++|+|++|..||... ....... ........ ..++.++.+++.+||..||++||++.++++ |||+
T Consensus 175 ~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~---------~~~~ 244 (244)
T smart00220 175 ILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ---------HPFF 244 (244)
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh---------CCCC
Confidence 999999999999662 1111111 11111111 118899999999999999999999999999 9996
No 394
>KOG0984|consensus
Probab=99.97 E-value=4.5e-32 Score=253.03 Aligned_cols=209 Identities=22% Similarity=0.222 Sum_probs=164.3
Q ss_pred cccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 191 DDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 191 ~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
-++..+++.-+..||+|+||.|=+-++. |...|||.++..- |+ ...+...+|+.+..+.
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~-------------q~q~r~L~dldi~~r~--- 101 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NS-------------QEQKRLLMDLDIIMRT--- 101 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc---Ch-------------HHHHHHHHhhhhhccC---
Confidence 3444467777889999999998777765 9999999995321 11 1223344566665444
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHH---hcCCCCHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRE---RCAQLSMHERVLL 345 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~---~~~~l~~~~~~~i 345 (588)
...|.+|.+||.+.+. | .+++.||.|..||+.+-++ ++..++|...-+|
T Consensus 102 ~~CPf~V~FyGa~~re-----------------------g-----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkI 153 (282)
T KOG0984|consen 102 VDCPFTVHFYGALFRE-----------------------G-----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKI 153 (282)
T ss_pred CCCCeEEEeehhhhcc-----------------------c-----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHh
Confidence 5899999999977653 2 3999999999999988764 4668999999999
Q ss_pred HHHHHHHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhc
Q psy4039 346 FTQLLEGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 346 ~~ql~~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
+..+.+||.|||++ .|||||+||+||||+.+ +++||||||.+-.+.+.... +-..|--.|||||.+..
T Consensus 154 a~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~-----GqVKiCDFGIsG~L~dSiAk------t~daGCkpYmaPEri~~ 222 (282)
T KOG0984|consen 154 AVSVVHALEFLHSKLSVIHRDVKPSNILINYD-----GQVKICDFGISGYLVDSIAK------TMDAGCKPYMAPERINP 222 (282)
T ss_pred HHHHHHHHHHHHHHhhhhhccCCcceEEEccC-----CcEEEcccccceeehhhhHH------HHhcCCCccCChhhcCc
Confidence 99999999999986 99999999999999998 99999999999765442211 12347779999999976
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS 459 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~ 459 (588)
+...- -|+-|+||||+|+++.||.+++.||..+
T Consensus 223 e~n~~--gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 223 ELNQK--GYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred ccCcc--cceeehhhhhhhhhhhhhhhcccccccc
Confidence 54322 2567999999999999999999999764
No 395
>KOG0664|consensus
Probab=99.97 E-value=4.4e-33 Score=268.88 Aligned_cols=257 Identities=24% Similarity=0.267 Sum_probs=193.3
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
.+.+-.+.||-|+||+||..++. |+.||+|++.+.- .... ..+.+-+|+++|..+ +|.|
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-------------q~L~--s~krvFre~kmLcfF----kHdN 113 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-------------QNLA--SCKRVFREIKMLSSF----RHDN 113 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-------------HHHH--HHHHHHHHHHHHHhh----cccc
Confidence 34455678999999999999997 8999999985311 1111 234456789999888 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
++..+++.+... ++ -...+|+++|.+..+|.+.|-... .++...+..+++||++||
T Consensus 114 VLSaLDILQPph-----------------~d------fFqEiYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGL 169 (449)
T KOG0664|consen 114 VLSLLDILQPAN-----------------PS------FFQELYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGL 169 (449)
T ss_pred HHHHHHhcCCCC-----------------ch------HHHHHHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhh
Confidence 998887765422 11 011378889998888888876543 899999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
.|||+.+|.||||||.|.|++++ ..+||||||+|+..+..... .++..+-|-.|.|||++.+... |
T Consensus 170 KYLHsA~ILHRDIKPGNLLVNSN-----CvLKICDFGLARvee~d~~~----hMTqEVVTQYYRAPEiLMGaRh-----Y 235 (449)
T KOG0664|consen 170 KYLHTANILHRDIKPGNLLVNSN-----CILKICDFGLARTWDQRDRL----NMTHEVVTQYYRAPELLMGARR-----Y 235 (449)
T ss_pred HHHhhcchhhccCCCccEEeccC-----ceEEecccccccccchhhhh----hhHHHHHHHHhccHHHhhcchh-----h
Confidence 99999999999999999999998 89999999999986553322 2224556889999999998763 5
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccc---------------------------ccccccc-ccCCC--------CCCc
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSAR---------------------------NTDYEVN-ALPQL--------NTNV 477 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~---------------------------~~~~~~~-~~~~~--------~~~~ 477 (588)
+.+.||||+|||+.|++..+..|..... ....... ..|.+ +..-
T Consensus 236 s~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~ 315 (449)
T KOG0664|consen 236 TGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDK 315 (449)
T ss_pred cCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCccc
Confidence 6789999999999999998888865210 0000000 01111 1122
Q ss_pred cHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCcccc
Q psy4039 478 PEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 478 ~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~ 518 (588)
..+..+++.+++.+||++|.+.++++. |+++.
T Consensus 316 ~heav~~~~~~l~~d~dkris~~~A~~---------~~~~~ 347 (449)
T KOG0664|consen 316 NHEAVDLLQKLLHFDPDKRISVEEALQ---------HRYLE 347 (449)
T ss_pred chHHHHHHHHHhCCCCcccccHhhhcc---------ccccc
Confidence 346788999999999999999999988 77765
No 396
>KOG1152|consensus
Probab=99.97 E-value=2.5e-31 Score=278.75 Aligned_cols=209 Identities=24% Similarity=0.366 Sum_probs=171.9
Q ss_pred cccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhccc-ccchhhhHHHHHhhhcCCC
Q psy4039 193 VKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPL-RKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 193 i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~-~~~~~~~Ei~il~~l~~l~ 269 (588)
-.+.+|...+.+|.|+||.|+.|+++ ...|+||+|++..+-. ..++.- +--.+.-||.||..+..-
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~----------DtWvrDrkLGtVp~EIqIla~l~~~- 626 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILV----------DTWVRDRKLGTVPSEIQILATLNKH- 626 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhh----------hhhhcccccCccchhHHHHHHhhhc-
Confidence 34467999999999999999999998 6799999996532211 111100 111234699999998322
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-C-cHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-T-DLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-g-sL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
.|+||++++++|++.. +.|++||--+ | +|.++|.-+. .++|.++..|++
T Consensus 627 sH~NIlKlLdfFEddd----------------------------~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFk 677 (772)
T KOG1152|consen 627 SHENILKLLDFFEDDD----------------------------YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFK 677 (772)
T ss_pred CccchhhhhheeecCC----------------------------eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHH
Confidence 4999999999999853 4999999873 4 8999998765 899999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
||+.|+++||++||||||||-+||.++.+ +-+||+|||.|...+++. +. .++||..|.|||++.+.++
T Consensus 678 QV~agi~hlh~~~ivhrdikdenvivd~~-----g~~klidfgsaa~~ksgp---fd----~f~gtv~~aapevl~g~~y 745 (772)
T KOG1152|consen 678 QVVAGIKHLHDQGIVHRDIKDENVIVDSN-----GFVKLIDFGSAAYTKSGP---FD----VFVGTVDYAAPEVLGGEKY 745 (772)
T ss_pred HHHhccccccccCceecccccccEEEecC-----CeEEEeeccchhhhcCCC---cc----eeeeeccccchhhhCCCcc
Confidence 99999999999999999999999999998 899999999998776642 22 5789999999999988764
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcc
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQ 458 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~ 458 (588)
-+..-|||++|+++|.++....||++
T Consensus 746 -----~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 746 -----LGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred -----CCCcchhhhhhheeeEEEeccCCCcC
Confidence 34568999999999999999999975
No 397
>KOG1290|consensus
Probab=99.97 E-value=1.7e-29 Score=261.05 Aligned_cols=143 Identities=20% Similarity=0.184 Sum_probs=114.2
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.+.-.+|.+.++||=|-|++||+|.+. .+.||+|+.+. ++ - -.+....||++|+.++.--
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS--Aq---------h-------YtEaAlDEIklL~~v~~~D 135 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS--AQ---------H-------YTEAALDEIKLLQQVREGD 135 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh--hh---------H-------HHHHHHHHHHHHHHHHhcC
Confidence 445578999999999999999999987 68899999852 11 1 1223356999999874321
Q ss_pred -CC---CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHh-cCCCCHHHHHH
Q psy4039 270 -PH---PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRER-CAQLSMHERVL 344 (588)
Q Consensus 270 -~H---pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~-~~~l~~~~~~~ 344 (588)
+| ..||+|++.|....| .+.++++|+|+++.+|..+|... -..++...+..
T Consensus 136 p~~~~~~~VV~LlD~FkhsGp------------------------NG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~ 191 (590)
T KOG1290|consen 136 PNDPGKKCVVQLLDHFKHSGP------------------------NGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKE 191 (590)
T ss_pred CCCCCCceeeeeeccceecCC------------------------CCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHH
Confidence 23 379999999987432 23379999999999999999865 24799999999
Q ss_pred HHHHHHHHHHHHHh-CCceeccCCCCcEEEcCC
Q psy4039 345 LFTQLLEGVTHLNM-HRTAHRDLKSDNILLDCS 376 (588)
Q Consensus 345 i~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~ 376 (588)
|++||+.||.|||+ .||||-||||+|||+..+
T Consensus 192 I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 192 ICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 99999999999997 599999999999998544
No 398
>KOG0670|consensus
Probab=99.97 E-value=2.2e-30 Score=268.54 Aligned_cols=252 Identities=24% Similarity=0.342 Sum_probs=192.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC--CC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP--PH 271 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~--~H 271 (588)
+.|.+....|+|-|++|.+|.+. |..||||+|++... |.++ =..|++||++|...- .-
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----------M~Kt--------Gl~EleiLkKL~~AD~Edk 493 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----------MHKT--------GLKELEILKKLNDADPEDK 493 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----------Hhhh--------hhHHHHHHHHhhccCchhh
Confidence 67888899999999999999997 88999999976432 1221 235889999884321 12
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc--CCCCHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC--AQLSMHERVLLFTQL 349 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~--~~l~~~~~~~i~~ql 349 (588)
-++++|+..|.. ..++++|+|-+..+|.+.|+.-+ ..|....+..++.|+
T Consensus 494 ~Hclrl~r~F~h----------------------------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 494 FHCLRLFRHFKH----------------------------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred hHHHHHHHHhhh----------------------------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHH
Confidence 366777666554 23699999999999999998753 468889999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
.-||.+|-..||+|.||||+|||+++.. ..+||||||.|.........+| .-+..|.|||++.+.++
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~k----~iLKLCDfGSA~~~~eneitPY-------LVSRFYRaPEIiLG~~y-- 612 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNESK----NILKLCDFGSASFASENEITPY-------LVSRFYRAPEIILGLPY-- 612 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccCc----ceeeeccCccccccccccccHH-------HHHHhccCcceeecCcc--
Confidence 9999999999999999999999998763 6899999999987665433332 23558999999999874
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccc--------------------c-------------c-----------
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNT--------------------D-------------Y----------- 465 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~--------------------~-------------~----------- 465 (588)
....|+||+||+||||.||+..|.+...+. . +
T Consensus 613 ----d~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~ 688 (752)
T KOG0670|consen 613 ----DYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREK 688 (752)
T ss_pred ----cCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEecccccccee
Confidence 456999999999999999999987720000 0 0
Q ss_pred ---cccccC------------CCCCC---ccHHHHHHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 466 ---EVNALP------------QLNTN---VPEVMRRLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 466 ---~~~~~~------------~~~~~---~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.....| .++.. +-..+++|+.+||..||++|.|..|+|. ||||..
T Consensus 689 ~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~---------HpFi~~ 751 (752)
T KOG0670|consen 689 RTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK---------HPFITE 751 (752)
T ss_pred EEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc---------CCcccC
Confidence 000001 01111 1235889999999999999999999999 999863
No 399
>KOG1167|consensus
Probab=99.96 E-value=3.1e-30 Score=263.51 Aligned_cols=251 Identities=24% Similarity=0.382 Sum_probs=191.1
Q ss_pred CCeEEeeeecccCceeEEEEEEC-----CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR-----GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~-----g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
+.|...++||.|+|++||++++. .+.||+|.+...+ .-..+.+|+++|..+ ..
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-------------------~p~ri~~El~~L~~~---gG 93 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-------------------SPSRILNELEMLYRL---GG 93 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-------------------CchHHHHHHHHHHHh---cc
Confidence 77889999999999999999886 4689999984322 233467899999887 78
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
+.||+++.+++.. +.++.+||||++ .+-.++.. .++..++..+++.+
T Consensus 94 ~~ni~~~~~~~rn----------------------------nd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~l 141 (418)
T KOG1167|consen 94 SDNIIKLNGCFRN----------------------------NDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNL 141 (418)
T ss_pred chhhhcchhhhcc----------------------------CCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHH
Confidence 9999999988765 336999999995 56666654 57789999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC--------C-----------Cccc--------
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS--------G-----------LSMQ-------- 402 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~--------~-----------~~~~-------- 402 (588)
+.||.|+|.+|||||||||+|+|.+... ..-.|.|||+|...+. . ....
T Consensus 142 l~Al~~~h~~GIvHRDiKpsNFL~n~~t----~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 217 (418)
T KOG1167|consen 142 LKALAHLHKNGIVHRDIKPSNFLYNRRT----QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATAS 217 (418)
T ss_pred HHHhhhhhccCccccCCCcccccccccc----CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccccc
Confidence 9999999999999999999999998764 5667999999972110 0 0000
Q ss_pred ----cc--------cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc-----------
Q psy4039 403 ----YS--------SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS----------- 459 (588)
Q Consensus 403 ----~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~----------- 459 (588)
+. .......||++|.|||++...+. .++++||||.|||++.+++++.||...
T Consensus 218 ~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~-----QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~ 292 (418)
T KOG1167|consen 218 KPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR-----QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIA 292 (418)
T ss_pred CCCCceeccCCCccceecccCCCCCCCchHHHhhccC-----cCCccceeeccceeehhhccccccccCccccchHHHHH
Confidence 00 00112469999999999987653 457899999999999999999998651
Q ss_pred ----------------c---cc-cc----------cccc-------------ccCCCCCCccHHHHHHHHHhhhhCCCCC
Q psy4039 460 ----------------A---RN-TD----------YEVN-------------ALPQLNTNVPEVMRRLVAKLLENDPSDR 496 (588)
Q Consensus 460 ----------------~---~~-~~----------~~~~-------------~~~~~~~~~~~~l~~Li~~~L~~dP~~R 496 (588)
. .. .. +... ......+..|..+.+|+.+||+.||.+|
T Consensus 293 tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kR 372 (418)
T KOG1167|consen 293 TIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKR 372 (418)
T ss_pred HHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhc
Confidence 0 00 00 0000 0001112345688999999999999999
Q ss_pred CCHHHHHHHHhhhhhcCCcccc
Q psy4039 497 PSAELAATVCQLYLWAPKHWLY 518 (588)
Q Consensus 497 ps~~e~l~~L~~~~~~~h~w~~ 518 (588)
.|++++|. |||+.
T Consensus 373 itAEeALk---------HpFF~ 385 (418)
T KOG1167|consen 373 ITAEDALK---------HPFFD 385 (418)
T ss_pred ccHHHHhc---------CcCCc
Confidence 99999999 99997
No 400
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=9.2e-30 Score=296.22 Aligned_cols=214 Identities=15% Similarity=0.152 Sum_probs=153.3
Q ss_pred CC-CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 270 PH-PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 270 ~H-pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
.| +||++++++|....+ ++. ....++.+||+++++|.++|......+++.++..++.|
T Consensus 30 ~~~~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~q 88 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNL--------------------DGL-DDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQ 88 (793)
T ss_pred hHHHHHHHhhcccCCccc--------------------ccc-ccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHH
Confidence 67 789899998754211 011 22347888999999999999865557999999999999
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCC--------------CCCCCceeeeccccccccCCCC-----------cccc
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSE--------------DNTCPQLVITDFGSSYTNKSGL-----------SMQY 403 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~--------------~~~~~~vkL~DFGla~~~~~~~-----------~~~~ 403 (588)
|++||.|||++||+||||||+||||+... .+....+||+|||+++...... ..+.
T Consensus 89 i~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~ 168 (793)
T PLN00181 89 IVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPF 168 (793)
T ss_pred HHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCC
Confidence 99999999999999999999999996421 0111567888888887532100 0001
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccccc-ccccccccCCCCCCccHHHH
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN-TDYEVNALPQLNTNVPEVMR 482 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~l~ 482 (588)
.......+||+.|||||++.+.. ++.++|||||||++|||++|.+|+...... ........++......+...
T Consensus 169 ~~~~~~~~gt~~Y~APE~~~~~~------~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
T PLN00181 169 PMKQILAMEMSWYTSPEEDNGSS------SNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEA 242 (793)
T ss_pred cccccccCCCcceEChhhhccCC------CCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHH
Confidence 11112356899999999997665 457899999999999999999997643111 01111111111111234567
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 483 RLVAKLLENDPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 483 ~Li~~~L~~dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
+++.+||++||.+||++.++++ |||+..
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~---------h~~~~~ 270 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ---------SEFINE 270 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh---------chhhhh
Confidence 8999999999999999999998 999974
No 401
>KOG0576|consensus
Probab=99.96 E-value=3.6e-30 Score=274.07 Aligned_cols=252 Identities=24% Similarity=0.288 Sum_probs=198.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
++|+....+|.|+||.|||++++ +...|||+++.+... .-.-...||-+++.+ +|||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-----------------d~~~iqqei~~~~dc----~h~n 73 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-----------------DFSGIQQEIGMLRDC----RHPN 73 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-----------------cccccccceeeeecC----CCcC
Confidence 88999999999999999999997 889999999643211 112234578888877 9999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||.+++.|-. ...+++.|||| +|+|.+.-+..+ .+++.++..+.+..++|
T Consensus 74 ivay~gsylr----------------------------~dklwicMEycgggslQdiy~~Tg-plselqiayvcRetl~g 124 (829)
T KOG0576|consen 74 IVAYFGSYLR----------------------------RDKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQG 124 (829)
T ss_pred hHHHHhhhhh----------------------------hcCcEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhcc
Confidence 9999876654 33499999999 579988777665 89999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC-CCCccC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT-PGLFSF 431 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~~ 431 (588)
|.|||++|-+|||||-.|||+.+. +.+|++|||.+-.+..... ....+.||+.|||||+..-. .+.
T Consensus 125 l~ylhs~gk~hRdiKGanilltd~-----gDvklaDfgvsaqitati~-----KrksfiGtpywmapEvaaverkgg--- 191 (829)
T KOG0576|consen 125 LKYLHSQGKIHRDIKGANILLTDE-----GDVKLADFGVSAQITATIA-----KRKSFIGTPYWMAPEVAAVERKGG--- 191 (829)
T ss_pred chhhhcCCcccccccccceeeccc-----CceeecccCchhhhhhhhh-----hhhcccCCccccchhHHHHHhccc---
Confidence 999999999999999999999988 8899999999866544221 22357899999999997522 222
Q ss_pred CCCCcCchhhHHHHHHHHhcCCCCCcccccccccc-----ccccCC--CCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 432 VNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE-----VNALPQ--LNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 432 ~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~-----~~~~~~--~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
+..+||||++|+...|+---.+|........... ....|. -+...++.+.++++.+|..+|.+||+++.++.
T Consensus 192 -ynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 192 -YNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -ccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 5578999999999999998888866532211110 111111 23467889999999999999999999999888
Q ss_pred HHhhhhhcCCccccCC
Q psy4039 505 VCQLYLWAPKHWLYGA 520 (588)
Q Consensus 505 ~L~~~~~~~h~w~~~~ 520 (588)
||++...
T Consensus 271 ---------h~fvs~~ 277 (829)
T KOG0576|consen 271 ---------HPFVSQT 277 (829)
T ss_pred ---------ceeeccc
Confidence 8888744
No 402
>KOG1024|consensus
Probab=99.95 E-value=8.4e-28 Score=242.39 Aligned_cols=260 Identities=19% Similarity=0.254 Sum_probs=191.3
Q ss_pred CCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
.++....++-+|.||.||.|.|+... ..........|.......+.....+..|.-.+..+ .|||+.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEd---------t~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~----sH~nll 350 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREED---------TYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA----SHPNLL 350 (563)
T ss_pred hheechhhhhcCchhheeeeeecccC---------CcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC----cCCCcc
Confidence 55777788999999999999887211 11111222223222323333344455566666665 799999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHh-------cCCCCHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRER-------CAQLSMHERVLLFT 347 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~-------~~~l~~~~~~~i~~ 347 (588)
.+.+++.+.. ...+.++.+++ |+|..||..+ ...++.-+...++.
T Consensus 351 ~V~~V~ie~~---------------------------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 351 SVLGVSIEDY---------------------------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ceeEEEeecc---------------------------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 9999987631 13677788886 8999999843 23577888999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|++.|++|||++||||.||..+|.+||+. ..+||+|=.++|..-.+...... ....-...||+||.+....
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~-----LqVkltDsaLSRDLFP~DYhcLG---DnEnRPvkWMslEal~n~~- 474 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQ-----LQVKLTDSALSRDLFPGDYHCLG---DNENRPVKWMSLEALQNSH- 474 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhh-----eeEEeccchhccccCcccccccC---CCCCCcccccCHHHHhhhh-
Confidence 99999999999999999999999999988 89999999999875442221111 1122356899999998765
Q ss_pred CccCCCCCcCchhhHHHHHHHHhc-CCCCCcccc--ccc-cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSA--RNT-DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAA 503 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~--~~~-~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l 503 (588)
+++++|||||||++|||+| |+.|+..-. +.. ..+.+.+-.-|.+||+++..+|.-||..+|++||+++|+.
T Consensus 475 -----yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 475 -----YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred -----hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 5678999999999999997 889986521 111 1223344456789999999999999999999999999998
Q ss_pred HHHhhh
Q psy4039 504 TVCQLY 509 (588)
Q Consensus 504 ~~L~~~ 509 (588)
.-|..+
T Consensus 550 ~cLseF 555 (563)
T KOG1024|consen 550 ICLSEF 555 (563)
T ss_pred HHHHHH
Confidence 866654
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=4.5e-27 Score=225.28 Aligned_cols=209 Identities=33% Similarity=0.482 Sum_probs=173.4
Q ss_pred ecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 204 IAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
||+|++|.||++... ++.++||++....... ....+.+|+.+++.+ +|++|+++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----------------~~~~~~~e~~~~~~l----~~~~i~~~~~~~ 60 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS----------------LLEELLREIEILKKL----NHPNIVKLYGVF 60 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh----------------HHHHHHHHHHHHHhc----CCCCeeeEeeee
Confidence 689999999999998 8999999985322110 124566788999887 899999999988
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
... ...+++||++. ++|.+++......+++..+..++.++++++.|||+.|
T Consensus 61 ~~~----------------------------~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 112 (215)
T cd00180 61 EDE----------------------------NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNG 112 (215)
T ss_pred ecC----------------------------CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 752 24899999996 8999999875347899999999999999999999999
Q ss_pred ceeccCCCCcEEEcC-CCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCch
Q psy4039 361 TAHRDLKSDNILLDC-SEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDA 439 (588)
Q Consensus 361 IvHrDLKp~NILld~-~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDV 439 (588)
++|+||+|.||+++. + ..++|+|||.+........ ......++..|++||.+.... ..+.++|+
T Consensus 113 ~~H~dl~~~ni~~~~~~-----~~~~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~-----~~~~~~D~ 177 (215)
T cd00180 113 IIHRDLKPENILLDSDN-----GKVKLADFGLSKLLTSDKS-----LLKTIVGTPAYMAPEVLLGKG-----YYSEKSDI 177 (215)
T ss_pred eeccCCCHhhEEEeCCC-----CcEEEecCCceEEccCCcc-----hhhcccCCCCccChhHhcccC-----CCCchhhh
Confidence 999999999999998 5 6899999999987654321 111345788999999986641 14467999
Q ss_pred hhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 440 WTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 440 wS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
||+|+++++| ..+.+++..|+..||++||+++++++
T Consensus 178 ~~lg~~~~~l-----------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~ 213 (215)
T cd00180 178 WSLGVILYEL-----------------------------PELKDLIRKMLQKDPEKRPSAKEILE 213 (215)
T ss_pred HHHHHHHHHH-----------------------------HHHHHHHHHHhhCCcccCcCHHHHhh
Confidence 9999999999 67899999999999999999999887
No 404
>KOG1345|consensus
Probab=99.95 E-value=1.3e-28 Score=238.09 Aligned_cols=247 Identities=20% Similarity=0.207 Sum_probs=182.9
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+.|.+.+.+|+|.||.+-+|.++ .+.+++|.+.. ....++.|. +|...--.| ..|.|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~------p~tt~~dF~------------rEfhY~~~L---s~H~h 82 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR------PQTTQADFV------------REFHYSFFL---SPHQH 82 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc------chhhHHHHH------------HHhccceee---ccchh
Confidence 67999999999999999999998 67899998742 112234444 444433333 58999
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
||.-|++.... .+..+.+|||+. |+|.+-+... .+.|.-...++.|+++|
T Consensus 83 Ii~tY~vaFqt---------------------------~d~YvF~qE~aP~gdL~snv~~~--GigE~~~K~v~~ql~SA 133 (378)
T KOG1345|consen 83 IIDTYEVAFQT---------------------------SDAYVFVQEFAPRGDLRSNVEAA--GIGEANTKKVFAQLLSA 133 (378)
T ss_pred hhHHHHHHhhc---------------------------CceEEEeeccCccchhhhhcCcc--cccHHHHHHHHHHHHHH
Confidence 99877665432 124788999995 9998887665 78899999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV 432 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 432 (588)
+.|+|++++||||||.+||||-..+. ..+||||||+.+..+.... ..--+..|.|||++...+. -...
T Consensus 134 i~fMHsknlVHRdlK~eNiLif~~df---~rvKlcDFG~t~k~g~tV~--------~~~~~~~y~~pe~~~~~~n-e~~~ 201 (378)
T KOG1345|consen 134 IEFMHSKNLVHRDLKAENILIFDADF---YRVKLCDFGLTRKVGTTVK--------YLEYVNNYHAPELCDTVVN-EKLV 201 (378)
T ss_pred HHHhhccchhhcccccceEEEecCCc---cEEEeeecccccccCceeh--------hhhhhcccCCcHHHhhccc-cceE
Confidence 99999999999999999999965433 6899999999876544221 1223568999999865432 1111
Q ss_pred CCCcCchhhHHHHHHHHhcCCCCCcccccc-c------cccc---cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 433 NYSKSDAWTAGTVAYEIFGHDNPFYQSARN-T------DYEV---NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 433 ~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~-~------~~~~---~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
..+.+|||.||+++|.+++|..||...... . .+.. ...|.....+++.+..+.++-|.++|++|--..++
T Consensus 202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred ecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 345689999999999999999999753111 1 1111 23444456678999999999999999999555554
Q ss_pred HH
Q psy4039 503 AT 504 (588)
Q Consensus 503 l~ 504 (588)
..
T Consensus 282 kk 283 (378)
T KOG1345|consen 282 KK 283 (378)
T ss_pred HH
Confidence 44
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=3.5e-27 Score=223.65 Aligned_cols=152 Identities=21% Similarity=0.206 Sum_probs=120.7
Q ss_pred CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc
Q psy4039 324 TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY 403 (588)
Q Consensus 324 gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~ 403 (588)
|+|.+++..++..+++.+++.|+.|+++||.|||+++ ||+|||++.+ +.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~-----~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWD-----GLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCc-----cceee--ccceEeeccc-----
Confidence 6899999876657999999999999999999999998 9999999987 78888 9999765432
Q ss_pred ccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cccccCC------C
Q psy4039 404 SSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EVNALPQ------L 473 (588)
Q Consensus 404 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~~~~~~------~ 473 (588)
...||+.|||||++.+.. ++.++|||||||++|||++|+.||......... .....+. .
T Consensus 63 -----~~~g~~~y~aPE~~~~~~------~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQS------YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred -----cCCCcccccChHHhcCCC------CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 125899999999997765 457899999999999999999999753221110 0000000 1
Q ss_pred CCCccH--HHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 474 NTNVPE--VMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 474 ~~~~~~--~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
+..+++ ++++++.+||..||.+||++.++++
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~ 164 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLA 164 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHH
Confidence 122333 6999999999999999999999999
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.4e-25 Score=219.13 Aligned_cols=199 Identities=29% Similarity=0.407 Sum_probs=159.9
Q ss_pred eEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
|.+.+.||.|++|.||++.+. +..+|||.+...... .....+.+|+..++.+ +|+|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~~~~~----~~~~i~ 60 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----------------KQREEFLREIRILKKL----KHPNIV 60 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----------------HHHHHHHHHHHHHHhC----CCCChh
Confidence 567889999999999999997 589999998532211 0223556688888887 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
++++++.... ..++++|++. ++|.+++......+++.....++.+++.++.
T Consensus 61 ~~~~~~~~~~----------------------------~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 112 (225)
T smart00221 61 KLYGVFEDPE----------------------------PLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALE 112 (225)
T ss_pred hheeeeecCC----------------------------ceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 9999876531 3889999995 5999999876423899999999999999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
|||+++++|+||+|+||+++.+ ..++|+|||.+......... ......++..|++||.+. .... .+
T Consensus 113 ~lh~~~i~h~di~~~ni~v~~~-----~~~~l~d~g~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~-~~~~----~~ 178 (225)
T smart00221 113 YLHSLGIVHRDLKPENILLGMD-----GLVKLADFGLARFIHRDLAA----LLKTVKGTPFYLAPEVLL-GGKG----YG 178 (225)
T ss_pred HHHhCCeecCCCCHHHEEEcCC-----CCEEEeeCceeeEecCcccc----cccceeccCCcCCHhHhc-CCCC----CC
Confidence 9999999999999999999987 78999999999876543200 111356788999999984 2211 34
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcc
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQ 458 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~ 458 (588)
.++||||||+++|||++|+.||..
T Consensus 179 ~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 179 EAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred chhhHHHHHHHHHHHHHCCCCccc
Confidence 589999999999999999999966
No 407
>KOG0195|consensus
Probab=99.91 E-value=1.3e-24 Score=210.26 Aligned_cols=258 Identities=17% Similarity=0.238 Sum_probs=204.2
Q ss_pred ccCCCccccccCCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhh
Q psy4039 185 ETLPDVDDVKVDDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNS 264 (588)
Q Consensus 185 ~~~~~~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~ 264 (588)
+++..-..++..++.+..+|.+...|..|+|+|.|..+++|++. .+++.....++|.+|.--|+-
T Consensus 179 atlsr~~gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~---------------vr~~t~risrdfneefp~lri 243 (448)
T KOG0195|consen 179 ATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILN---------------VREVTARISRDFNEEFPALRI 243 (448)
T ss_pred cccccccCcchhhhhhhhhhccCCCcccccccccCcchhhhhhh---------------hhhcchhhcchhhhhCcceee
Confidence 34445567888888889999999999999999999999999983 455666677888888888776
Q ss_pred hcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHh-cCCCCHHHH
Q psy4039 265 VENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRER-CAQLSMHER 342 (588)
Q Consensus 265 l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~-~~~l~~~~~ 342 (588)
+ .||||..+++.|.... ++.++..|+. |||...|++. ....+..++
T Consensus 244 f----shpnilpvlgacnspp----------------------------nlv~isq~mp~gslynvlhe~t~vvvd~sqa 291 (448)
T KOG0195|consen 244 F----SHPNILPVLGACNSPP----------------------------NLVIISQYMPFGSLYNVLHEQTSVVVDHSQA 291 (448)
T ss_pred e----cCCchhhhhhhccCCC----------------------------CceEeeeeccchHHHHHHhcCccEEEecchH
Confidence 6 8999999999998632 3888999995 9999999976 335788999
Q ss_pred HHHHHHHHHHHHHHHhC-Cce-eccCCCCcEEEcCCCCCCCCceeee--ccccccccCCCCccccccccccccCCccccc
Q psy4039 343 VLLFTQLLEGVTHLNMH-RTA-HRDLKSDNILLDCSEDNTCPQLVIT--DFGSSYTNKSGLSMQYSSADIELGGNVALMA 418 (588)
Q Consensus 343 ~~i~~ql~~gL~yLH~~-~Iv-HrDLKp~NILld~~~~~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~A 418 (588)
.+++.++++|++|||+- .++ ---|.+..++||++ .+++|+ |--++-.. ....-.|.||+
T Consensus 292 v~faldiargmaflhslep~ipr~~lns~hvmided-----ltarismad~kfsfqe------------~gr~y~pawms 354 (448)
T KOG0195|consen 292 VRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED-----LTARISMADTKFSFQE------------VGRAYSPAWMS 354 (448)
T ss_pred HHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch-----hhhheecccceeeeec------------cccccCcccCC
Confidence 99999999999999984 333 44688999999988 455543 32222111 12223679999
Q ss_pred hhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccc----cccccccccCCCCCCccHHHHHHHHHhhhhCCC
Q psy4039 419 PEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR----NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPS 494 (588)
Q Consensus 419 PE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~----~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~ 494 (588)
||.++..+... +-.++|+|||++++||+.|...||.+... .....+..+..+|+.++..+..|+.-|+..||.
T Consensus 355 pealqrkped~---n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpg 431 (448)
T KOG0195|consen 355 PEALQRKPEDL---NIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPG 431 (448)
T ss_pred HHHHhcCchhc---chhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCC
Confidence 99998877543 34579999999999999999999987432 233345667788999999999999999999999
Q ss_pred CCCCHHHHHHHHhhh
Q psy4039 495 DRPSAELAATVCQLY 509 (588)
Q Consensus 495 ~Rps~~e~l~~L~~~ 509 (588)
+||.++.++-+|+.+
T Consensus 432 krpkfdmivpilekm 446 (448)
T KOG0195|consen 432 KRPKFDMIVPILEKM 446 (448)
T ss_pred cCCCcceehhhHHHh
Confidence 999999998877754
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.3e-23 Score=220.73 Aligned_cols=188 Identities=15% Similarity=0.095 Sum_probs=131.7
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
....++|.+.+.||+|+||+||+|.+. ++.||||++......... ....+.+.+|+.+|+.+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~------------~~~~~~~~~E~~iL~~L--- 78 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSK------------PLARHLAAREIRALKTV--- 78 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccccc------------HHHHHHHHHHHHHHHhc---
Confidence 344488999999999999999999874 677899987421100000 00224477899999998
Q ss_pred CCCCceEE-EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 269 PPHPNVVV-MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 269 ~~HpNIV~-l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
+|+|||. ++++ + ..|+||||+ +++|.. +. ... ...++
T Consensus 79 -~h~~iv~~l~~~---------------------------~-----~~~LVmE~~~G~~L~~-~~----~~~---~~~~~ 117 (365)
T PRK09188 79 -RGIGVVPQLLAT---------------------------G-----KDGLVRGWTEGVPLHL-AR----PHG---DPAWF 117 (365)
T ss_pred -cCCCCCcEEEEc---------------------------C-----CcEEEEEccCCCCHHH-hC----ccc---hHHHH
Confidence 8999984 4421 1 279999999 467752 21 111 14678
Q ss_pred HHHHHHHHHHHhCCceeccC-CCCcEEEcCCCCCCCCceeeeccccccccCCCCcccc---ccccccccCCccccchhHH
Q psy4039 347 TQLLEGVTHLNMHRTAHRDL-KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQY---SSADIELGGNVALMAPEVA 422 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDL-Kp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~---~~~~~~~~GT~~Y~APE~l 422 (588)
.|+++||.|||++||+|||| ||+|||++.+ +.+||+|||+|+.......... ...-....|++.|+|||++
T Consensus 118 ~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~-----~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~ 192 (365)
T PRK09188 118 RSAHRALRDLHRAGITHNDLAKPQNWLMGPD-----GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL 192 (365)
T ss_pred HHHHHHHHHHHHCCCeeCCCCCcceEEEcCC-----CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence 99999999999999999999 9999999876 7899999999997655322111 1111356799999999999
Q ss_pred hcCCCCccCCCCCcCchh
Q psy4039 423 LATPGLFSFVNYSKSDAW 440 (588)
Q Consensus 423 ~~~~~~~~~~~~~ksDVw 440 (588)
...........+..+|-|
T Consensus 193 ~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 193 TPRERKILARKSLPSRIW 210 (365)
T ss_pred ChhhhccccccccccCcE
Confidence 755432222222336766
No 409
>KOG0590|consensus
Probab=99.90 E-value=1.6e-24 Score=241.71 Aligned_cols=257 Identities=21% Similarity=0.266 Sum_probs=182.3
Q ss_pred EEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 199 QIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
.....+|.|.+|.|+.+... ....+.|..+......... +. ....+..|.-+-.. +.|||++.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~---~~--------~~~~i~sE~~i~~~----l~h~~~~e 385 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESE---RK--------YNYNITSEFCIGSS----LSHPNIIE 385 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccH---HH--------Hhhhhhhheeeccc----ccCCchhh
Confidence 45678999999977776654 3334444332100011000 00 00002234334333 38999987
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yL 356 (588)
.+..+.+.. ..+-.||||.++|..++.... .++..++-.++.|++.|+.||
T Consensus 386 ~l~~~~~~~----------------------------~~~~~mE~~~~Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~ 436 (601)
T KOG0590|consen 386 TLDIVQEID----------------------------GILQSMEYCPYDLFSLVMSNG-KLTPLEADCFFKQLLRGVKYL 436 (601)
T ss_pred hHHHHhhcc----------------------------cchhhhhcccHHHHHHHhccc-ccchhhhhHHHHHHHHHHHHH
Confidence 776665522 133339999769999887753 789999999999999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCc
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 436 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~k 436 (588)
|+.||.|||||++|+++..+ +.+||+|||.+.....+.... .......+|+-.|+|||++.+... ....
T Consensus 437 h~~GiahrdlK~enll~~~~-----g~lki~Dfg~~~vf~~~~e~~-~~~~~g~~gS~pY~apE~~~~~~y-----dpr~ 505 (601)
T KOG0590|consen 437 HSMGLAHRDLKLENLLVTEN-----GILKIIDFGAASVFRYPWEKN-IHESSGIVGSDPYLAPEVLTGKEY-----DPRA 505 (601)
T ss_pred HhcCceeccCccccEEEecC-----CceEEeecCcceeeccCcchh-hhhhcCcccCCcCcCccccccccc-----Ccch
Confidence 99999999999999999988 899999999998755432211 122346889999999999987763 2345
Q ss_pred CchhhHHHHHHHHhcCCCCCccccccccc-----------cccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q psy4039 437 SDAWTAGTVAYEIFGHDNPFYQSARNTDY-----------EVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATV 505 (588)
Q Consensus 437 sDVwS~Gvil~ElltG~~Pf~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~ 505 (588)
.||||.|+++..|++|+.||......... .......+...+|...+.+|.+||+.||.+|.|++++++
T Consensus 506 vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~- 584 (601)
T KOG0590|consen 506 VDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN- 584 (601)
T ss_pred hhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh-
Confidence 89999999999999999999653222110 011112234567888999999999999999999999999
Q ss_pred HhhhhhcCCccccC
Q psy4039 506 CQLYLWAPKHWLYG 519 (588)
Q Consensus 506 L~~~~~~~h~w~~~ 519 (588)
.+|++.
T Consensus 585 --------d~W~~~ 590 (601)
T KOG0590|consen 585 --------DEWIRS 590 (601)
T ss_pred --------ChHhhh
Confidence 999973
No 410
>KOG1164|consensus
Probab=99.89 E-value=8e-22 Score=206.07 Aligned_cols=264 Identities=17% Similarity=0.164 Sum_probs=190.2
Q ss_pred CeEEeeeecccCceeEEEEEECC---eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFRG---VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~g---~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
+|.+.+.||+|+||.||.+.+.. ..+|+|........ ....+..|..++..+.....-++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~-----------------~~~~l~~E~~vl~~l~~~~~~~~ 81 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS-----------------KPSVLKIEIQVLKKLEKKNGPSH 81 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC-----------------CCccchhHHHHHHHHhhhcCCCC
Confidence 89999999999999999999874 46999987432111 11145668888888732112246
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERC-AQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~-~~l~~~~~~~i~~ql~~g 352 (588)
+..+++.... ....-|+||+.++.+|.++..... ..++..++..|+.|++.+
T Consensus 82 ~~~~~~~G~~---------------------------~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~ 134 (322)
T KOG1164|consen 82 FPKLLDHGRS---------------------------TEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNA 134 (322)
T ss_pred CCEEEEeccC---------------------------CCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHH
Confidence 6677665421 122489999999999999886654 689999999999999999
Q ss_pred HHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeecccccc--ccCC-CCc--cccccccccccCCccccchhHHhcCCC
Q psy4039 353 VTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY--TNKS-GLS--MQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 353 L~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~--~~~~-~~~--~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
|.+||+.|++||||||+|+++..........+.|.|||+|+ .... ... .+.........||..|+++.+..+..
T Consensus 135 l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e- 213 (322)
T KOG1164|consen 135 LEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE- 213 (322)
T ss_pred HHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-
Confidence 99999999999999999999986632211479999999998 3222 111 11111122456999999999988776
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCcccccc---ccccc----cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARN---TDYEV----NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 500 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~---~~~~~----~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~ 500 (588)
.+.+-|+||++.++.|++.|..||...... ..+.. ..........|.++.++...+-..+...+|...
T Consensus 214 -----~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~ 288 (322)
T KOG1164|consen 214 -----QGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE 288 (322)
T ss_pred -----cCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence 457789999999999999999999653211 11111 011112344567788888888888999999999
Q ss_pred HHHHHHhhhh
Q psy4039 501 LAATVCQLYL 510 (588)
Q Consensus 501 e~l~~L~~~~ 510 (588)
.+...++...
T Consensus 289 ~~~~~l~~~~ 298 (322)
T KOG1164|consen 289 KLAELLKDVF 298 (322)
T ss_pred HHHHHHHHHH
Confidence 9888765443
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=8.6e-22 Score=199.69 Aligned_cols=251 Identities=27% Similarity=0.338 Sum_probs=186.3
Q ss_pred eEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCC-ceEE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHP-NVVV 276 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp-NIV~ 276 (588)
|.+.+.||.|+||.||++.+. ..+|+|.+........ .....+.+|+.+++.+ .|+ ||++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~--------------~~~~~~~~e~~~~~~~----~~~~~i~~ 62 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS--------------KEVERFLREIQILASL----NHPPNIVK 62 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccch--------------hHHHHHHHHHHHHHHc----cCCcceee
Confidence 678889999999999999988 8899999854221111 1234566788888887 666 7999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERC--AQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~--~~l~~~~~~~i~~ql~~gL 353 (588)
+++.+.... ..+++++++ ++++.+++.... ..++......++.|++.++
T Consensus 63 ~~~~~~~~~----------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (384)
T COG0515 63 LYDFFQDEG----------------------------SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSAL 114 (384)
T ss_pred EEEEEecCC----------------------------EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHH
Confidence 999985421 279999999 578887776553 2689999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCC-ceeeeccccccccCCCCccccc-cccccccCCccccchhHHhcCC-CCcc
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCP-QLVITDFGSSYTNKSGLSMQYS-SADIELGGNVALMAPEVALATP-GLFS 430 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~-~vkL~DFGla~~~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~-~~~~ 430 (588)
.|+|+.+++|||+||+||+++.. . .++++|||.++........... .......||..|+|||.+.+.. .
T Consensus 115 ~~~H~~~~~hrd~kp~nil~~~~-----~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~--- 186 (384)
T COG0515 115 EYLHSKGIIHRDIKPENILLDRD-----GRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLA--- 186 (384)
T ss_pred HHHHhCCeeccCCCHHHeeecCC-----CCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCC---
Confidence 99999999999999999999987 5 6999999999865443221100 1123578999999999997631 1
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCccccc----cccc---cccccC----CCCCCc----cHHHHHHHHHhhhhCCCC
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSAR----NTDY---EVNALP----QLNTNV----PEVMRRLVAKLLENDPSD 495 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~----~~~~---~~~~~~----~~~~~~----~~~l~~Li~~~L~~dP~~ 495 (588)
......|+||+|++++++++|..||..... .... .....+ ...... ...+.+++..|+..+|..
T Consensus 187 -~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (384)
T COG0515 187 -YASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKN 265 (384)
T ss_pred -CCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchh
Confidence 134678999999999999999999765432 1111 111111 111111 257899999999999999
Q ss_pred CCCHHHHHH
Q psy4039 496 RPSAELAAT 504 (588)
Q Consensus 496 Rps~~e~l~ 504 (588)
|.+..+...
T Consensus 266 r~~~~~~~~ 274 (384)
T COG0515 266 RLSSSSDLS 274 (384)
T ss_pred cCCHHHHhh
Confidence 999988766
No 412
>KOG1163|consensus
Probab=99.88 E-value=3e-22 Score=191.30 Aligned_cols=259 Identities=17% Similarity=0.237 Sum_probs=192.6
Q ss_pred ccccccCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC
Q psy4039 190 VDDVKVDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN 267 (588)
Q Consensus 190 ~~~i~~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~ 267 (588)
...+....|.+.++||+|+||.+|.|... |..||||+=.+ ..+...+..|..+.+.++.
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-------------------~a~hpqL~yEskvY~iL~~ 69 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-------------------KAKHPQLLYESKVYRILQG 69 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-------------------cCCCcchhHHHHHHHHhcc
Confidence 34456689999999999999999999886 89999998532 1244455668777777633
Q ss_pred CCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 268 LPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 268 l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
-..|..+..+..+ ..+-.+||+..+.||.+++.-+...++..++..++-
T Consensus 70 ---g~GiP~i~~y~~e----------------------------~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaD 118 (341)
T KOG1163|consen 70 ---GVGIPHIRHYGTE----------------------------KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLAD 118 (341)
T ss_pred ---CCCCchhhhhccc----------------------------cccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHH
Confidence 3344333433333 124689999999999999988777899999999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC---CCccccccccccccCCccccchhHHhc
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS---GLSMQYSSADIELGGNVALMAPEVALA 424 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~---~~~~~~~~~~~~~~GT~~Y~APE~l~~ 424 (588)
|++.-++|+|.++.|||||||+|+|..-+ -.|..+.++|||+|+.+.+ ....++. .+....||..|.+--...+
T Consensus 119 Qml~RiEyvH~r~fiHRDIKPdNFLMGlg--rh~~kl~LIDFGLaKky~d~~t~~HIpyr-e~r~ltGTaRYASinAh~g 195 (341)
T KOG1163|consen 119 QMLSRIEYVHLRNFIHRDIKPDNFLMGLG--RHCNKLYLIDFGLAKKYRDIRTRQHIPYR-EDRNLTGTARYASINAHLG 195 (341)
T ss_pred HHHHHHHHHHhhccccccCCccceeeccc--cccceEEEEeccchhhhccccccccCccc-cCCccceeeeehhhhhhhh
Confidence 99999999999999999999999999755 3457899999999998654 2222332 3346789999998777655
Q ss_pred CCCCccCCCCCcCchhhHHHHHHHHhcCCCCCcccc---ccccccc-------cccCCCCCCccHHHHHHHHHhhhhCCC
Q psy4039 425 TPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA---RNTDYEV-------NALPQLNTNVPEVMRRLVAKLLENDPS 494 (588)
Q Consensus 425 ~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~---~~~~~~~-------~~~~~~~~~~~~~l~~Li~~~L~~dP~ 494 (588)
.. .+..-|+=|+|.++.....|..||.+-. ....++. .....+...+|.++.-.+.-|=..-=+
T Consensus 196 ~e------qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~ 269 (341)
T KOG1163|consen 196 IE------QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFE 269 (341)
T ss_pred hh------hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCC
Confidence 44 3356799999999999999999998832 1112211 112234567899998888888877777
Q ss_pred CCCCHHHHHHHHh
Q psy4039 495 DRPSAELAATVCQ 507 (588)
Q Consensus 495 ~Rps~~e~l~~L~ 507 (588)
+-|...-+-+...
T Consensus 270 E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 270 EKPDYMYLRQLFR 282 (341)
T ss_pred CCCcHHHHHHHHH
Confidence 8888766555443
No 413
>KOG1165|consensus
Probab=99.88 E-value=6e-22 Score=196.95 Aligned_cols=257 Identities=15% Similarity=0.190 Sum_probs=193.5
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN 273 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN 273 (588)
-.|.++++||+|+||+.+.|+.- +++||||.=... ....++..|....+.| ...++
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------S~APQLrdEYr~YKlL---~g~~G 85 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------SEAPQLRDEYRTYKLL---GGTEG 85 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-------------------CCcchHHHHHHHHHHH---cCCCC
Confidence 57999999999999999999886 899999984211 1334455677777666 46788
Q ss_pred eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 274 VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 274 IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
|..+|.+-.+ +.+-.+|||.++.||.+++.-++..|+..++..|+.||+.-+
T Consensus 86 IP~vYYFGqe----------------------------G~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~ri 137 (449)
T KOG1165|consen 86 IPQVYYFGQE----------------------------GKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRI 137 (449)
T ss_pred CCceeeeccc----------------------------cchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHH
Confidence 8877755333 124678999999999999999988999999999999999999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCc---cccccccccccCCccccchhHHhcCCCCcc
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLS---MQYSSADIELGGNVALMAPEVALATPGLFS 430 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~---~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 430 (588)
+|+|++.+|.|||||+|+||..-.......+.|+|||+|+.+.+... .++.. .....||..||+=--..+..
T Consensus 138 e~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE-~KSLsGTARYMSINTHlGrE---- 212 (449)
T KOG1165|consen 138 EYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYRE-HKSLSGTARYMSINTHLGRE---- 212 (449)
T ss_pred HHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcccc-ccccccceeeeEeeccccch----
Confidence 99999999999999999999765554446889999999998655322 23322 23567999999977766655
Q ss_pred CCCCCcCchhhHHHHHHHHhcCCCCCcccc---ccccccc-------cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHH
Q psy4039 431 FVNYSKSDAWTAGTVAYEIFGHDNPFYQSA---RNTDYEV-------NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAE 500 (588)
Q Consensus 431 ~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~---~~~~~~~-------~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~ 500 (588)
.+.+-|+=|+|-+++..|.|..||.+-. ....++. .....+..++|.++..-+.-.=..+=.+-|..+
T Consensus 213 --QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYd 290 (449)
T KOG1165|consen 213 --QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYD 290 (449)
T ss_pred --hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHH
Confidence 3456799999999999999999998731 1111111 111234567888888877776667777788877
Q ss_pred HHHHHHhhh
Q psy4039 501 LAATVCQLY 509 (588)
Q Consensus 501 e~l~~L~~~ 509 (588)
-+..++...
T Consensus 291 ylr~Lf~dv 299 (449)
T KOG1165|consen 291 YLRKLFDDV 299 (449)
T ss_pred HHHHHHHHH
Confidence 666555433
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=5.3e-21 Score=193.42 Aligned_cols=262 Identities=25% Similarity=0.332 Sum_probs=152.0
Q ss_pred CCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhccccc-chhhhHHHHHhhhcCCCCCC
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRK-PLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~-~~~~~Ei~il~~l~~l~~Hp 272 (588)
..+..++.||.|+++.||.+++. ++++|||++.-.. ......++.+.+|...... .....-..... |-
T Consensus 12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~--~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~-------~~ 82 (288)
T PF14531_consen 12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA--DASANEYEQLKEEQLAITLFPGVKNPKEAYR-------HL 82 (288)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS--TTHTTHHHHHHHHHHGGGGSTT--SHHHHHH-------HH
T ss_pred eEEEEccccccCCceEEEEEEEccCCceEEEEEEeccc--ccchHHHHHHHHHHHHhhhhccCCCHHHHHH-------hc
Confidence 35788899999999999999998 6999999985433 2222234444444322221 00001111111 11
Q ss_pred ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCC-c---eEEEEEecCCCcHHHHHHH---hcCC---CCHHHH
Q psy4039 273 NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRN-M---SLFILMKKYNTDLRNYLRE---RCAQ---LSMHER 342 (588)
Q Consensus 273 NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~-~---~l~lvme~~~gsL~~~L~~---~~~~---l~~~~~ 342 (588)
.++.-++...-.. .|..... +.+.+ . +.+++|+.+.++|.+++.. .... +....+
T Consensus 83 r~l~P~d~~~i~~-------------~~~~~~~--~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~ar 147 (288)
T PF14531_consen 83 RFLVPLDLLRIPG-------------KPPFFER--GPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAAR 147 (288)
T ss_dssp -B---SEEEEETT-------------S-SEEEE--CETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHH
T ss_pred eEEeeeEEEEEcC-------------CCcceec--CCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHH
Confidence 1222222222110 0000000 00001 1 3688899988888888653 2212 333445
Q ss_pred HHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHH
Q psy4039 343 VLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVA 422 (588)
Q Consensus 343 ~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 422 (588)
..+..|+++.+++||+.||+|+||||+|++++.+ +.++|+||+.....+..... ...+..|.+||..
T Consensus 148 l~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~-----G~v~Lg~F~~~~r~g~~~~~--------~~~~~~~~PPe~~ 214 (288)
T PF14531_consen 148 LSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQD-----GGVFLGDFSSLVRAGTRYRC--------SEFPVAFTPPELE 214 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TT-----S-EEE--GGGEEETTEEEEG--------GGS-TTTS-HHHH
T ss_pred HHHHHHHHHHHHHHhhcceEecccceeeEEEcCC-----CCEEEcChHHHeecCceeec--------cCCCcccCChhhh
Confidence 6677999999999999999999999999999998 89999999987665442111 2245789999987
Q ss_pred hcCCC--CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCC
Q psy4039 423 LATPG--LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 496 (588)
Q Consensus 423 ~~~~~--~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~R 496 (588)
..... .....++.+.|.|++|+++|.|+||+.||........... ... ...++|+.+++||..+|++||.+|
T Consensus 215 ~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-~f~-~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 215 SCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-DFS-RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-GGT-TSS---HHHHHHHHHHT-SSGGGS
T ss_pred hhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-cch-hcCCcCHHHHHHHHHHccCCcccC
Confidence 54311 0111234578999999999999999999986533322221 111 223789999999999999999988
No 415
>KOG0603|consensus
Probab=99.86 E-value=1.1e-22 Score=217.75 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=188.4
Q ss_pred eecccCceeEEEEEE-----CCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 203 FIAKGTNAVVYEATF-----RGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~-----~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
.+|+|+||.|+.+.- .|.-||.|..++...... .+.....|..++..+ .+||.+|++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~---------------~~~~t~~er~il~~~---~~~~f~v~l 62 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR---------------DRTHTKQERIILAFV---HNTPFLVKL 62 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccc---------------cccccccHHHHHhhc---cCCCceeee
Confidence 379999999986543 277899998864322211 111233467777776 469999999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yL 356 (588)
+..++.+. .+++++++. +|.|...+.+.. .+++.....+...++-|++++
T Consensus 63 hyafqt~~----------------------------kl~l~ld~~rgg~lft~l~~~~-~f~~~~~~~~~aelaLald~l 113 (612)
T KOG0603|consen 63 HYAFQTDG----------------------------KLYLILDFLRGGDLFTRLSKEV-MFDELDVAFYLAELALALDHL 113 (612)
T ss_pred eeeecccc----------------------------chhHhhhhcccchhhhccccCC-chHHHHHHHHHHHHHHHHhhc
Confidence 98887642 389999999 568888887654 788888999999999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCc
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSK 436 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~k 436 (588)
|+.+|+|||+|++||+++.+ |.+++.|||+++..-... ..|||..|||||++.+ ....
T Consensus 114 h~l~iiyrd~k~enilld~~-----Ghi~~tdfglske~v~~~---------~~cgt~eymApEI~~g--------h~~a 171 (612)
T KOG0603|consen 114 HKLGIAYRDYKLENVLLLLE-----GHIKLTDFGLSKEAVKEK---------IACGTYEYRAPEIING--------HLSA 171 (612)
T ss_pred chhHHHHhcccccceeeccc-----CccccCCchhhhHhHhhh---------hcccchhhhhhHhhhc--------cCCc
Confidence 99999999999999999998 899999999998743321 2289999999999983 2357
Q ss_pred CchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCH--HHHHHHHhhhhhcCC
Q psy4039 437 SDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSA--ELAATVCQLYLWAPK 514 (588)
Q Consensus 437 sDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~--~e~l~~L~~~~~~~h 514 (588)
+|.||||++++||++|..||..+...... ......|...+..+++++..++..+|.+|.-. +.+.++.+.-+...+
T Consensus 172 ~D~ws~gvl~felltg~~pf~~~~~~~Il--~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 172 ADWWSFGVLAFELLTGTLPFGGDTMKRIL--KAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred ccchhhhhhHHHHhhCCCCCchHHHHHHh--hhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 99999999999999999999883322222 22335677888999999999999999999765 566666665554446
Q ss_pred ccc
Q psy4039 515 HWL 517 (588)
Q Consensus 515 ~w~ 517 (588)
.|-
T Consensus 250 ~~~ 252 (612)
T KOG0603|consen 250 DWN 252 (612)
T ss_pred eHh
Confidence 665
No 416
>KOG1240|consensus
Probab=99.83 E-value=3.1e-21 Score=215.68 Aligned_cols=253 Identities=22% Similarity=0.218 Sum_probs=171.8
Q ss_pred CeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEE
Q psy4039 197 DIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVV 276 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~ 276 (588)
++...+.||++.|=+|.+|+++...|+||++-+.+..-.. +.+.+ ..+|++ .. +.+|||++.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL----~~~~q---------rL~~ik--~~---l~~~pn~lP 85 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISL----RPFKQ---------RLEEIK--FA---LMKAPNCLP 85 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCc----hHHHH---------HHHHHH--HH---hhcCCcccc
Confidence 7888899999999999999999767999998654322111 11111 122333 11 258999998
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yL 356 (588)
+..+..... ..|+|=+|...+|.+.|..++ -+..-+..-|+.|++.||.-+
T Consensus 86 fqk~~~t~k----------------------------AAylvRqyvkhnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qc 136 (1431)
T KOG1240|consen 86 FQKVLVTDK----------------------------AAYLVRQYVKHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQC 136 (1431)
T ss_pred hHHHHHhhH----------------------------HHHHHHHHHhhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHH
Confidence 876644321 267777777788998887764 678888999999999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeecccccccc--CCCCccccccccccccCCccccchhHHhcCCCCcc----
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN--KSGLSMQYSSADIELGGNVALMAPEVALATPGLFS---- 430 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~--~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~---- 430 (588)
|..||+|+|||.+||||++- .-+.|+||..-+.. ..+....++.--.+..--..|+|||.+....+...
T Consensus 137 H~~gVcHGDIKsENILiTSW-----NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~ 211 (1431)
T KOG1240|consen 137 HKLGVCHGDIKSENILITSW-----NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQD 211 (1431)
T ss_pred HHcCccccccccceEEEeee-----chhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCc
Confidence 99999999999999999987 56789999876542 11111111100001112237999999875321111
Q ss_pred -CCCCCcCchhhHHHHHHHHhc-CCCCCccc----cccc--cccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 431 -FVNYSKSDAWTAGTVAYEIFG-HDNPFYQS----ARNT--DYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 431 -~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~----~~~~--~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
..-.++.||||+||++.||++ |++||.-. .+.. .........++ +..++.||..|++.||++|.++++.
T Consensus 212 ~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 212 APLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred ccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHH
Confidence 112356799999999999998 57777432 1111 11111111121 2368999999999999999999997
Q ss_pred HH
Q psy4039 503 AT 504 (588)
Q Consensus 503 l~ 504 (588)
|+
T Consensus 289 L~ 290 (1431)
T KOG1240|consen 289 LQ 290 (1431)
T ss_pred HH
Confidence 76
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.2e-20 Score=182.03 Aligned_cols=154 Identities=19% Similarity=0.161 Sum_probs=103.4
Q ss_pred eeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchH-HHH---HHHhh-----hhcccccchhhhHHHHHhhhcCCCC
Q psy4039 201 GKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSH-AIL---KAMSK-----ELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~-~~~---k~~~~-----e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
.+.||+|+||.||+|.+. |++||||+++......... ... ..+.. ............|+.++..+ .
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~ 77 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL----V 77 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH----H
Confidence 467999999999999986 8999999997532211110 000 00000 00000112224588999888 5
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
|+++.....+... ..++||||++| ++...+... ..+++.++..++.|+
T Consensus 78 ~~~v~~p~~~~~~------------------------------~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi 126 (190)
T cd05147 78 TAGIPCPEPILLK------------------------------SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQV 126 (190)
T ss_pred HCCCCCCcEEEec------------------------------CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHH
Confidence 5554221111111 14799999965 454443222 379999999999999
Q ss_pred HHHHHHH-HhCCceeccCCCCcEEEcCCCCCCCCceeeecccccccc
Q psy4039 350 LEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 395 (588)
Q Consensus 350 ~~gL~yL-H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~ 395 (588)
+.+|.|+ |+.||+||||||+|||++. +.++|+|||+|...
T Consensus 127 ~~~L~~l~H~~giiHrDlkP~NIli~~------~~v~LiDFG~a~~~ 167 (190)
T cd05147 127 IQIMRILYQDCRLVHADLSEYNLLYHD------GKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEEC------CcEEEEEccccccC
Confidence 9999999 6899999999999999983 47999999999654
No 418
>KOG0606|consensus
Probab=99.82 E-value=1.2e-20 Score=211.06 Aligned_cols=147 Identities=27% Similarity=0.363 Sum_probs=116.1
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCcc--------c--cccccccccCCccccch
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM--------Q--YSSADIELGGNVALMAP 419 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~--------~--~~~~~~~~~GT~~Y~AP 419 (588)
+.+++|||+.||+|||+||+|.+|+.- +.+|++|||+.+..--.... . ..-.+...+|||.|.||
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~m-----GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP 227 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSM-----GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP 227 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeec-----ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence 778999999999999999999999987 89999999998752110000 0 01122346899999999
Q ss_pred hHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc-----cccccccccccCCCCCCccHHHHHHHHHhhhhCCC
Q psy4039 420 EVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS-----ARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPS 494 (588)
Q Consensus 420 E~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~-----~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~ 494 (588)
|++..+. |+..+|+|++|+|+||.+.|..||+++ .....-....+++-...+++++++++.++|+.+|.
T Consensus 228 eVilrqg------ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~ 301 (1205)
T KOG0606|consen 228 EVILRQG------YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPL 301 (1205)
T ss_pred hhhhhhc------cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChH
Confidence 9998765 557799999999999999999999997 33333334556666677899999999999999999
Q ss_pred CCCCHHHHHHHHh
Q psy4039 495 DRPSAELAATVCQ 507 (588)
Q Consensus 495 ~Rps~~e~l~~L~ 507 (588)
.|.-...++.+-+
T Consensus 302 ~Rlgt~ga~evk~ 314 (1205)
T KOG0606|consen 302 CRLGTGGALEVKQ 314 (1205)
T ss_pred hhcccchhhhhhh
Confidence 9976556666655
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=8e-20 Score=176.44 Aligned_cols=155 Identities=19% Similarity=0.172 Sum_probs=107.3
Q ss_pred eeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchH-HHHH---HHhhh-----hcccccchhhhHHHHHhhhcCCCC
Q psy4039 201 GKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSH-AILK---AMSKE-----LLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~-~~~k---~~~~e-----~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
...||+|+||.||+|.+. |+.||||+++......... ..+. .+... ..........+|...+.++ .
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~ 77 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL----Y 77 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH----H
Confidence 468999999999999986 8999999997643211110 0000 00000 0000112234688888887 7
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHH-HHHHHhcCCCCHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLR-NYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~-~~L~~~~~~l~~~~~~~i~~q 348 (588)
|++|.....+... ..++||||++| ++. ..+... .++..+...++.|
T Consensus 78 ~~~i~~p~~~~~~------------------------------~~~lVmE~~~g~~~~~~~l~~~--~~~~~~~~~i~~~ 125 (190)
T cd05145 78 EAGVPVPEPILLK------------------------------KNVLVMEFIGDDGSPAPRLKDV--PLEEEEAEELYEQ 125 (190)
T ss_pred hCCCCCceEEEec------------------------------CCEEEEEEecCCCchhhhhhhc--cCCHHHHHHHHHH
Confidence 8876433222111 14799999965 333 334332 7888999999999
Q ss_pred HHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 349 LLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 349 l~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
++.++.++|+ +||+||||||+|||++ + +.++|+|||+|+....
T Consensus 126 l~~~l~~lH~~~givHrDlkP~NIll~-~-----~~~~liDFG~a~~~~~ 169 (190)
T cd05145 126 VVEQMRRLYQEAGLVHGDLSEYNILYH-D-----GKPYIIDVSQAVELDH 169 (190)
T ss_pred HHHHHHHHHHhCCEecCCCChhhEEEE-C-----CCEEEEEcccceecCC
Confidence 9999999999 9999999999999998 4 6899999999976543
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=3e-19 Score=175.58 Aligned_cols=185 Identities=12% Similarity=0.075 Sum_probs=130.0
Q ss_pred CCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
++|...++||.|+||.||.....+..+|||.++...... ......+ .....+.+|+..+.++ .||+|.
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~--~~~~~~f------~~g~~~e~Ea~~l~rL----~~~GI~ 98 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT--ERFLKSF------VKGDYYENLIVQTDRV----RSEGLA 98 (232)
T ss_pred CceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCch--HHHHHhh------hhhHHHHHHHHHHHHH----HHCCCC
Confidence 889999999999999999987777899999986432211 1111111 1234467899999988 899999
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
.+.+++.+.... ........+++|||++| +|.++. .+++ ....+++.+|.
T Consensus 99 ~~~d~~~~~~~~--------------------~~~~~~~~~lvmEyi~G~tL~~~~-----~~~~----~~~~~i~~~l~ 149 (232)
T PRK10359 99 SLNDFYLLAERK--------------------TLRYAHTYIMLIEYIEGVELNDMP-----EISE----DVKAKIKASIE 149 (232)
T ss_pred cceEeeeecccc--------------------cccccCCeEEEEEEECCccHHHhh-----hccH----HHHHHHHHHHH
Confidence 998887653100 00112248999999965 787763 2333 24669999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCC
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNY 434 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~ 434 (588)
.+|+.|++|||+||+||+++.+ + ++|+|||..+........ ..+..... +.
T Consensus 150 ~lH~~gi~H~Dikp~Nili~~~-----g-i~liDfg~~~~~~e~~a~-----------------d~~vler~------y~ 200 (232)
T PRK10359 150 SLHQHGMVSGDPHKGNFIVSKN-----G-LRIIDLSGKRCTAQRKAK-----------------DRIDLERH------YG 200 (232)
T ss_pred HHHHcCCccCCCChHHEEEeCC-----C-EEEEECCCcccccchhhH-----------------HHHHHHhH------hc
Confidence 9999999999999999999876 6 999999988654321100 11233222 23
Q ss_pred CcCchhhHHHHHHHHh
Q psy4039 435 SKSDAWTAGTVAYEIF 450 (588)
Q Consensus 435 ~ksDVwS~Gvil~Ell 450 (588)
.++|+||||+++.-..
T Consensus 201 ~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 201 IKNEIKDLGYYLLIYK 216 (232)
T ss_pred ccccccceeEeehHHH
Confidence 5799999999877543
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=4.6e-19 Score=171.03 Aligned_cols=197 Identities=10% Similarity=0.033 Sum_probs=137.1
Q ss_pred EEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 199 QIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.+...|++|+||+||.+...+.+++.+.+..... . .+ ......+.+|+++|+++ ..|++|.+++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~------~----~~---~~~~~l~~rE~~iL~~L---~~~~~vP~ll 68 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPW------W----LR---GVAWWLARREALALRQL---DGLPRTPRLL 68 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchh------h----hh---hHHHHHHHHHHHHHHhc---CCCCCCCEEE
Confidence 4567899999999998888888898887631110 0 00 00122567899999988 3567888887
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN 357 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH 357 (588)
++. ..+++|||+. .+|.+.+.. ....++.|++.+|.++|
T Consensus 69 ~~~--------------------------------~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH 108 (218)
T PRK12274 69 HWD--------------------------------GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLH 108 (218)
T ss_pred EEc--------------------------------CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHH
Confidence 651 1789999985 467543311 12357889999999999
Q ss_pred hCCceeccC-CCCcEEEcCCCCCCCCceeeeccccccccCCCCcc-c-cccc------cccccCCccccchhHHhcCCCC
Q psy4039 358 MHRTAHRDL-KSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSM-Q-YSSA------DIELGGNVALMAPEVALATPGL 428 (588)
Q Consensus 358 ~~~IvHrDL-Kp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~-~-~~~~------~~~~~GT~~Y~APE~l~~~~~~ 428 (588)
++||+|||| ||+|||++.+ +.++|+|||+|......... . .... ......++.|++|+-..-....
T Consensus 109 ~~GIvHrDL~kp~NILv~~~-----g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~ 183 (218)
T PRK12274 109 RCGVAHNDLAKEANWLVQED-----GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRT 183 (218)
T ss_pred HCcCccCCCCCcceEEEcCC-----CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccc
Confidence 999999999 7999999876 78999999999865432210 0 0000 0012368899999976533210
Q ss_pred ccCCCCCcCchhhHHHHHHHHhcCCCCCcccc
Q psy4039 429 FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSA 460 (588)
Q Consensus 429 ~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~ 460 (588)
.-...+.++.|+-+|.++|+..|+.++.
T Consensus 184 ----~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 184 ----SWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred ----hhHHHHHHHhcchHHHHHhccCCccccC
Confidence 1134688899999999999999987643
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=1e-18 Score=170.85 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=104.8
Q ss_pred EEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcC-CCCCCceEE
Q psy4039 199 QIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVEN-LPPHPNVVV 276 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~-l~~HpNIV~ 276 (588)
.-.+.||+|+||.||. ++ ....+||++...... ..+.+.+|+.+++.+.+ ...||||++
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-----------------~~~~~~rEi~~l~~L~~~~~~h~nIvr 65 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-----------------GDKEIRRELKYYAHLSRRLIDWSGIPR 65 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccc-----------------hHHHHHHHHHHHHHhhccCCCCcccce
Confidence 3456899999999996 44 233479988542110 12346789999998732 126899999
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEE-EEEecCC---CcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLF-ILMKKYN---TDLRNYLRERCAQLSMHERVLLFTQLLEG 352 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~-lvme~~~---gsL~~~L~~~~~~l~~~~~~~i~~ql~~g 352 (588)
+++++++.. | .+.++ +||||++ |+|.+++.+. .+++. ..++.|++.+
T Consensus 66 ~yg~~et~~----------------------g---~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~ 116 (210)
T PRK10345 66 YYGTVETDC----------------------G---TGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKK 116 (210)
T ss_pred eeEEEEeCC----------------------C---CeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHH
Confidence 999998732 1 12344 7899954 7999999764 56666 3568888888
Q ss_pred H-HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 353 V-THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 353 L-~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
+ +|||+++|+||||||+|||++...++. ..++|+||+-+
T Consensus 117 l~~yLh~~~IvhrDlKp~NILl~~~~~~~-~~~~LiDg~G~ 156 (210)
T PRK10345 117 LKRYLLDNRIVTMELKPQNILCQRISESE-VIPVVCDNIGE 156 (210)
T ss_pred HHHHHHHCCEeecCCCHHHEEEeccCCCC-CcEEEEECCCC
Confidence 8 999999999999999999998643222 58999994433
No 423
>KOG1033|consensus
Probab=99.77 E-value=1.4e-19 Score=190.82 Aligned_cols=178 Identities=26% Similarity=0.362 Sum_probs=135.3
Q ss_pred CceEEEEEecC-CCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeec
Q psy4039 312 NMSLFILMKKY-NTDLRNYLRER--CAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITD 388 (588)
Q Consensus 312 ~~~l~lvme~~-~gsL~~~L~~~--~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~D 388 (588)
..++|+.|++| ..+|.++|..+ ....++.....++.|++.|+.| ++.+|||+||.||+...+ ..+||+|
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d-----~q~kIgD 399 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD-----DQLKIGD 399 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc-----hhhhhhh
Confidence 44699999999 58999999743 3467888999999999999999 999999999999999887 6899999
Q ss_pred cccccccCCCC-ccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc
Q psy4039 389 FGSSYTNKSGL-SMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE 466 (588)
Q Consensus 389 FGla~~~~~~~-~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~ 466 (588)
||+........ ..+.....+..+||..||+||.+.++. ++.|+||||||+|++|++. -..+|.......++.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~------y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r 473 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQ------YSEKVDIYALGLILAELLIQFSTQFERIATLTDIR 473 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhh------hhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh
Confidence 99988765533 122222334678999999999999876 5689999999999999997 344444332223333
Q ss_pred ccccC-CCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 467 VNALP-QLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 467 ~~~~~-~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
...+| .+..+.| +-.+|+.++|.+.|.+||++.+..-
T Consensus 474 ~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~~ 511 (516)
T KOG1033|consen 474 DGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEVAL 511 (516)
T ss_pred cCCCChHHhhcCc-HHHHHHHHhcCCCcccCchHHHHhh
Confidence 33333 2223333 3468999999999999996655444
No 424
>KOG1023|consensus
Probab=99.76 E-value=3.7e-18 Score=183.15 Aligned_cols=205 Identities=22% Similarity=0.225 Sum_probs=154.9
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
+.|.|+.+++|.+.+. ...++|.+|| .|+|.+.+......+++.-...+++
T Consensus 4 l~h~n~~~f~g~~~~~----------------------------~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~r 55 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDG----------------------------PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIR 55 (484)
T ss_pred cchhhhhhheeeEecC----------------------------CceEEEEeeecCccHHhHHhccccCccHHHHHHHHH
Confidence 3899999999999873 1489999999 5999999998767899999999999
Q ss_pred HHHHHHHHHHhCCc-eeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCC
Q psy4039 348 QLLEGVTHLNMHRT-AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATP 426 (588)
Q Consensus 348 ql~~gL~yLH~~~I-vHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 426 (588)
++++||.|||+..| .|+.+++.|.++|.. +.+||+|||+........... ......-..-|.|||.+....
T Consensus 56 di~~Gl~ylh~s~i~~hg~l~s~nClvd~~-----w~lklt~~Gl~~~~~~~~~~~---~~~~~~~~~lw~aPellr~~~ 127 (484)
T KOG1023|consen 56 DISKGLAYLHNSPIGYHGALKSSNCLVDSR-----WVLKLTDFGLNSLLEETAEPE---AHHPIRKALLWTAPELLRGAL 127 (484)
T ss_pred HHHHHHHHHhcCcceeeeeeccccceeeee-----EEEEechhhhccccccccccc---ccchhHHHHhccCHHHhcccc
Confidence 99999999998766 999999999999998 899999999987764310000 000112344799999998753
Q ss_pred CC-ccCCCCCcCchhhHHHHHHHHhcCCCCCcccccccc-----------ccccccCCCC--CCccHHHHHHHHHhhhhC
Q psy4039 427 GL-FSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTD-----------YEVNALPQLN--TNVPEVMRRLVAKLLEND 492 (588)
Q Consensus 427 ~~-~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~-----------~~~~~~~~~~--~~~~~~l~~Li~~~L~~d 492 (588)
.. .....+.++||||||++++|+++...||........ .....+|.++ ..+++++..++.+||..+
T Consensus 128 ~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~ 207 (484)
T KOG1023|consen 128 SQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEI 207 (484)
T ss_pred cccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccC
Confidence 21 111134569999999999999999999976322211 1111222222 145667999999999999
Q ss_pred CCCCCCHHHHHHHHhhh
Q psy4039 493 PSDRPSAELAATVCQLY 509 (588)
Q Consensus 493 P~~Rps~~e~l~~L~~~ 509 (588)
|.+||+++++-..+...
T Consensus 208 P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 208 PEKRPSIEQIRSKLLTI 224 (484)
T ss_pred hhhCccHHHHHhhhhhh
Confidence 99999999988766543
No 425
>KOG1166|consensus
Probab=99.71 E-value=3.3e-17 Score=187.09 Aligned_cols=253 Identities=18% Similarity=0.116 Sum_probs=164.2
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPP 270 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~ 270 (588)
++.-+.|.+.+.||+|+||.||+|... |+.||+|+=+.. ....-++ =..++.+|. ..-
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~--~~WEfYI------------------~~q~~~RLk-~~~ 752 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP--NPWEFYI------------------CLQVMERLK-PQM 752 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCC--Cceeeee------------------hHHHHHhhc-hhh
Confidence 445567999999999999999999987 889999985321 1111000 112233321 001
Q ss_pred CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 271 HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 271 HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
-+-|+.+..++. |. ..-++|+||.+ |+|.+++... ..++|..+..+..||
T Consensus 753 ~~~~~~~~~a~~------------~~----------------~~S~lv~ey~~~Gtlld~~N~~-~~m~e~lv~~~~~qm 803 (974)
T KOG1166|consen 753 LPSIMHISSAHV------------FQ----------------NASVLVSEYSPYGTLLDLINTN-KVMDEYLVMFFSCQM 803 (974)
T ss_pred hcchHHHHHHHc------------cC----------------CcceeeeeccccccHHHhhccC-CCCCchhhhHHHHHH
Confidence 223333332221 11 12688999996 9999999844 489999999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCC--CCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCC
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDN--TCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPG 427 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~--~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 427 (588)
+.-+++||..+|||+||||+|.||.....+ ....++|+|||.+-...--.. ...-...++|-.+-.+|+..+.+.
T Consensus 804 l~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~---~~~F~~~~~td~f~C~EM~~grpW 880 (974)
T KOG1166|consen 804 LRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPD---GTKFKAVWHTDLFDCIEMREGRPW 880 (974)
T ss_pred HHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCC---CcEEeeeeccccchhHHHhcCCCC
Confidence 999999999999999999999999532211 125799999999854321000 011124668889999999998873
Q ss_pred CccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHH-HHHHHHHhhhhCCCCCCCHHHHHHHH
Q psy4039 428 LFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEV-MRRLVAKLLENDPSDRPSAELAATVC 506 (588)
Q Consensus 428 ~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-l~~Li~~~L~~dP~~Rps~~e~l~~L 506 (588)
+-.+|.|.++.+++.||.|+.-- ..+..... ....++..+-.+ ..++...+|..|-..=|...++...+
T Consensus 881 ------tYq~DyfGlAa~~h~mLFG~y~q---~~~g~~~~-~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~ 950 (974)
T KOG1166|consen 881 ------TYQIDYFGLAATVHVMLFGKYME---VKNGSSWM-VKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTEL 950 (974)
T ss_pred ------chhhhhHHHHHHHHHHHHHHHHH---hcCCccee-ccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHH
Confidence 45699999999999999997542 11111111 111122222222 45677778885554446666666655
Q ss_pred h
Q psy4039 507 Q 507 (588)
Q Consensus 507 ~ 507 (588)
+
T Consensus 951 ~ 951 (974)
T KOG1166|consen 951 E 951 (974)
T ss_pred H
Confidence 4
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=1.6e-17 Score=165.91 Aligned_cols=158 Identities=21% Similarity=0.167 Sum_probs=106.7
Q ss_pred CeEEeeeecccCceeEEEEE-E--CCeeEEEEEEecCCCCcchHHHH----HHHh-hh--hcccccchhhhHHHHHhhhc
Q psy4039 197 DIQIGKFIAKGTNAVVYEAT-F--RGVEYALKMMFNYSAASNSHAIL----KAMS-KE--LLPLRKPLRLNEDMLMNSVE 266 (588)
Q Consensus 197 ~~~~~~~IG~G~fG~Vy~a~-~--~g~~vAVK~i~~~~~~~~~~~~~----k~~~-~e--~~~~~~~~~~~Ei~il~~l~ 266 (588)
.|.+.+.||+|+||.||+|. + .|+.||||+++............ ..+. .. ........+.+|+.++..+
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L- 107 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL- 107 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 47788899999999999998 3 38999999997533211110000 0000 00 0000112346799999888
Q ss_pred CCCCCC--ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHH
Q psy4039 267 NLPPHP--NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERV 343 (588)
Q Consensus 267 ~l~~Hp--NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~ 343 (588)
.+. .+.+++++ + ..++||||++| +|....... ..+...++.
T Consensus 108 ---~~~~i~~p~~~~~---------------------------~-----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~ 151 (237)
T smart00090 108 ---YEAGVPVPKPIAW---------------------------R-----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEF 151 (237)
T ss_pred ---HhcCCCCCeeeEe---------------------------c-----CceEEEEEecCCccccccccc-CCcchHHHH
Confidence 332 22233321 0 15799999965 565544222 256677788
Q ss_pred HHHHHHHHHHHHHHhCC-ceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 344 LLFTQLLEGVTHLNMHR-TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 344 ~i~~ql~~gL~yLH~~~-IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
.++.|++.++.+||++| |+||||||+||+++ + +.++|+|||.|.....
T Consensus 152 ~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~-----~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 152 ELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D-----GKVVIIDVSQSVELDH 200 (237)
T ss_pred HHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C-----CCEEEEEChhhhccCC
Confidence 99999999999999999 99999999999998 4 6899999999875433
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=8.9e-17 Score=157.12 Aligned_cols=141 Identities=22% Similarity=0.321 Sum_probs=106.9
Q ss_pred eeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 202 KFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
+.||+|++|.||+|.+.+..|+||+............ .. .....+.+|+.++..+ .|+||.....++
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~--~~-------~~~~~~~~E~~~l~~l----~~~~i~~p~~~~ 68 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELD--ER-------IRRERTRREARIMSRA----RKAGVNVPAVYF 68 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHH--HH-------HHHHHHHHHHHHHHHH----HHCCCCCCeEEE
Confidence 5799999999999999999999998753222111100 00 1223456789999887 788876555444
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+.. ..+++|||+ +++|.+++.... + .+..++.+++.+|.++|+.+
T Consensus 69 ~~~~----------------------------~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 69 VDPE----------------------------NFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred EeCC----------------------------CCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC
Confidence 4321 268999999 569999886542 2 88899999999999999999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
++|||++|+|||++ + +.++|+|||+++.
T Consensus 116 i~H~Dl~p~Nil~~-~-----~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-G-----GKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-C-----CCEEEEECCcccC
Confidence 99999999999998 4 6799999998854
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=1.9e-16 Score=153.44 Aligned_cols=137 Identities=23% Similarity=0.264 Sum_probs=99.7
Q ss_pred eecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeeee
Q psy4039 203 FIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFT 282 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~ 282 (588)
.||+|+||.||+|.+.+..|+||.............. ......+.+|+.++..+ .|+++.....++.
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~---------~~~~~~~~~E~~~l~~l----~~~~i~~p~~~~~ 67 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDE---------RIRRERTRNEARLLSRA----RKAGVNTPVVYDV 67 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHH---------HHHHHHHHHHHHHHHHH----HHCCCCCCEEEEE
Confidence 4899999999999999999999996432211111100 01223456799999887 6665432222222
Q ss_pred ccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy4039 283 DFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRT 361 (588)
Q Consensus 283 ~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~I 361 (588)
+.. ..+++|||+ +++|.+++.... . .++.+++.+|.+||+.|+
T Consensus 68 ~~~----------------------------~~~lv~e~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 68 DPD----------------------------NKTIVMEYIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ECC----------------------------CCEEEEEEECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCe
Confidence 210 268999999 568988876531 1 889999999999999999
Q ss_pred eeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 362 AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 362 vHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
+|||++|+||+++ + +.++++|||+++.
T Consensus 112 ~H~Dl~~~Nil~~-~-----~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-D-----DKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-C-----CcEEEEECCCCcC
Confidence 9999999999998 4 6899999999865
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=1.6e-16 Score=154.34 Aligned_cols=152 Identities=18% Similarity=0.129 Sum_probs=103.2
Q ss_pred eEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhh-----hhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSK-----ELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~-----e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
|.+.+.||+|+||.||+|... |+.||||+++................. ...........+|+.++..+ .|
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~~ 92 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL----YE 92 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH----HH
Confidence 677889999999999999885 899999998643211000000000000 00111222356688888887 56
Q ss_pred Cce--EEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 272 PNV--VVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 272 pNI--V~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~l~~~~~~~i~~q 348 (588)
+++ ...++. ...+++|||+. ++|..... ......++.+
T Consensus 93 ~~i~v~~~~~~--------------------------------~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~ 133 (198)
T cd05144 93 EGFPVPKPIDW--------------------------------NRHAVVMEYIDGVELYRVRV-------LEDPEEVLDE 133 (198)
T ss_pred cCCCCCceeec--------------------------------CCceEEEEEeCCcchhhccc-------cccHHHHHHH
Confidence 542 222211 12589999995 57765432 1345678899
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
+++++.++|+.||+||||||+||+++.+ +.++|+|||+|.....
T Consensus 134 i~~~l~~lh~~gi~H~Dl~p~Nill~~~-----~~~~liDfg~~~~~~~ 177 (198)
T cd05144 134 ILEEIVKAYKHGIIHGDLSEFNILVDDD-----EKIYIIDWPQMVSTDH 177 (198)
T ss_pred HHHHHHHHHHCCCCcCCCCcccEEEcCC-----CcEEEEECCccccCCC
Confidence 9999999999999999999999999876 7899999999965543
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=3.8e-16 Score=174.26 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=106.9
Q ss_pred eEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVM 277 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l 277 (588)
|...+.||+|+||+||+|.+.+..+++|+.......... ... ......+.+|+.+++.+ +|+||+..
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~------~~~---~~~~~~~~~E~~~l~~l----~~~~i~~p 401 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPE------LDE---RLRTERTRAEARLLSEA----RRAGVPTP 401 (535)
T ss_pred cCccceeccCCcEEEEEEeecCccceeEEEecccccchh------HHH---HHHHHHHHHHHHHHHhh----cccCCCee
Confidence 455789999999999999998887877765321111100 000 01234566799999987 89998876
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHL 356 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yL 356 (588)
..++.+.. ..++||||+ +++|.+++. ....++.+++++|.||
T Consensus 402 ~~~~~~~~----------------------------~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~l 444 (535)
T PRK09605 402 VIYDVDPE----------------------------EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKL 444 (535)
T ss_pred EEEEEeCC----------------------------CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHH
Confidence 65554421 268999999 579998875 3467899999999999
Q ss_pred HhCCceeccCCCCcEEEcCCCCCCCCceeeecccccccc
Q psy4039 357 NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 395 (588)
Q Consensus 357 H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~ 395 (588)
|+.||+||||||+|||++ + +.++|+|||+|+..
T Consensus 445 H~~giiHrDlkp~NILl~-~-----~~~~liDFGla~~~ 477 (535)
T PRK09605 445 HKAGIVHGDLTTSNFIVR-D-----DRLYLIDFGLGKYS 477 (535)
T ss_pred HhCCCccCCCChHHEEEE-C-----CcEEEEeCcccccC
Confidence 999999999999999994 4 58999999999663
No 431
>KOG0590|consensus
Probab=99.64 E-value=2.7e-17 Score=183.87 Aligned_cols=257 Identities=20% Similarity=0.211 Sum_probs=188.0
Q ss_pred cCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
...|.+.+.||+|+|+.|-..... ...+|+|.+.......+ .......|..+-..+ .+|
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~---------------~~~~i~~e~~~~~~~---s~h 80 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSED---------------SSEHIDTETDIQKKL---SKH 80 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccc---------------hhhhcCccccccccc---ccc
Confidence 466888888999999999887764 45677776633221111 111222355555544 349
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHH-HHhcCCCCHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYL-RERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L-~~~~~~l~~~~~~~i~~ql 349 (588)
+|++++++...+.. ..++.+++. ++++.+.+ .......+...+..++.|+
T Consensus 81 ~n~~~~~~~~~~~~----------------------------~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql 132 (601)
T KOG0590|consen 81 SNTVHMIEPSSSPR----------------------------SYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQL 132 (601)
T ss_pred ccccccCCccCCCc----------------------------ccccccCcccccccccccccCCccCCCCcchhhhhhhh
Confidence 99999997765521 377888888 56888877 3332257778888999999
Q ss_pred HHHHHHHH-hCCceeccCCCCcEEEcCCCCCCCC-ceeeeccccccccCC-CCccccccccccccC-CccccchhHHhcC
Q psy4039 350 LEGVTHLN-MHRTAHRDLKSDNILLDCSEDNTCP-QLVITDFGSSYTNKS-GLSMQYSSADIELGG-NVALMAPEVALAT 425 (588)
Q Consensus 350 ~~gL~yLH-~~~IvHrDLKp~NILld~~~~~~~~-~vkL~DFGla~~~~~-~~~~~~~~~~~~~~G-T~~Y~APE~l~~~ 425 (588)
..++.|+| +.++.||||||+|.+++.. + .++++|||+|..+.. .... ......+| ++.|+|||...+.
T Consensus 133 ~s~l~~~H~~~~~~h~~ikP~n~~l~~s-----~~~l~~~df~~At~~~~~~g~~---~~~~~~~g~s~~y~a~E~~~~~ 204 (601)
T KOG0590|consen 133 NSGLSYLHPENGVTHRDIKPSNSLLDES-----GSALKIADFGLATAYRNKNGAE---RSLKDRCGSSPPYGAPEHLSGK 204 (601)
T ss_pred ccCccccCcccccccCCCCCccchhccC-----CCcccCCCchhhccccccCCcc---eeeecccCCCCCCCCcccccch
Confidence 99999999 9999999999999999988 5 899999999987655 2111 11124667 9999999998774
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccc----cc---cccCCCCCCccHHHHHHHHHhhhhCCCCCCC
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDY----EV---NALPQLNTNVPEVMRRLVAKLLENDPSDRPS 498 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~----~~---~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps 498 (588)
.. ..+..|+||.|+++.-+++|..||......... .. ......+..++....+++.+++..+|..|.+
T Consensus 205 ~~-----~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s 279 (601)
T KOG0590|consen 205 AY-----RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS 279 (601)
T ss_pred hh-----cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccc
Confidence 21 345689999999999999999998764222111 11 1123445678888999999999999999999
Q ss_pred HHHHHHHHhhhhhcCCccccC
Q psy4039 499 AELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 499 ~~e~l~~L~~~~~~~h~w~~~ 519 (588)
.+++.. ++|+..
T Consensus 280 ~~~~~~---------d~~~~~ 291 (601)
T KOG0590|consen 280 IEELKL---------DNWLSS 291 (601)
T ss_pred cccccc---------cccccc
Confidence 999888 999875
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=3e-15 Score=143.40 Aligned_cols=151 Identities=20% Similarity=0.118 Sum_probs=93.5
Q ss_pred eeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHH-H--HHHhhhh----cccccchhhhHHHHHhhhcCCCCCC
Q psy4039 201 GKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAI-L--KAMSKEL----LPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~-~--k~~~~e~----~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
++.||+|+||+||+|.+. +++||||++.+.......... + ....... ..........|...+..+ .+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l----~~~ 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL----YEA 77 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH----HHc
Confidence 567999999999999988 899999998653222111000 0 0000000 000001112344555444 222
Q ss_pred --ceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHH-HHHHHhcCCCCHHHHHHHHHH
Q psy4039 273 --NVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLR-NYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 273 --NIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~-~~L~~~~~~l~~~~~~~i~~q 348 (588)
.+.+.+++ ...+++|||++| ++. ..+... ... .++..++.+
T Consensus 78 ~~~~~~~~~~--------------------------------~~~~lv~e~~~g~~~~~~~l~~~--~~~-~~~~~~~~~ 122 (187)
T cd05119 78 GVPVPKPIDL--------------------------------NRHVLVMEFIGGDGIPAPRLKDV--RLL-EDPEELYDQ 122 (187)
T ss_pred CCCCCceEec--------------------------------CCCEEEEEEeCCCCccChhhhhh--hhc-ccHHHHHHH
Confidence 12222211 026899999954 221 222221 111 678899999
Q ss_pred HHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 349 LLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 349 l~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
++.++.++|. .+|+||||||+||+++ + +.++|+|||.+....
T Consensus 123 ~~~~l~~lh~~~~ivH~Dl~p~Nili~-~-----~~~~liDfg~a~~~~ 165 (187)
T cd05119 123 ILELMRKLYREAGLVHGDLSEYNILVD-D-----GKVYIIDVPQAVEID 165 (187)
T ss_pred HHHHHHHHhhccCcCcCCCChhhEEEE-C-----CcEEEEECccccccc
Confidence 9999999999 9999999999999999 5 689999999996543
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.59 E-value=1.1e-14 Score=145.73 Aligned_cols=148 Identities=19% Similarity=0.172 Sum_probs=104.2
Q ss_pred eeec-ccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhh--cccccchhhhHHHHHhhhcCCCCCCce--EE
Q psy4039 202 KFIA-KGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKEL--LPLRKPLRLNEDMLMNSVENLPPHPNV--VV 276 (588)
Q Consensus 202 ~~IG-~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~--~~~~~~~~~~Ei~il~~l~~l~~HpNI--V~ 276 (588)
..|| .||.|+||.+...+..++||.+..... +.+-...+. .......+.+|+.++..+ .|++| ++
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~------i~kv~~~~~~~~~~~~~r~~rE~~ll~~L----~~~gi~vP~ 106 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGL------IGKLSKDRYLFTGLERTRAFAEFRLLAQL----YEAGLPVPR 106 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcch------HHhhhhhcccccchhhhHHHHHHHHHHHH----HhCCCCCce
Confidence 3576 788888888888899999999843221 011111111 122445667899999998 77764 56
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC--CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN--TDLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~--gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
.+++..... + .....++|||++. .+|.+++... .+++. .+.+++.+|.
T Consensus 107 pl~~~~~~~----------------------~--~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~ 156 (239)
T PRK01723 107 PIAARVVRH----------------------G--LFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIA 156 (239)
T ss_pred eEeeeeeec----------------------C--cceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHH
Confidence 666543311 1 0112469999995 4899888653 55654 3678999999
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
+||++||+||||||+|||++.+ +.++|+|||.+..
T Consensus 157 ~lH~~GI~HrDlkp~NILv~~~-----~~v~LIDfg~~~~ 191 (239)
T PRK01723 157 RFHDAGVYHADLNAHNILLDPD-----GKFWLIDFDRGEL 191 (239)
T ss_pred HHHHCCCCCCCCCchhEEEcCC-----CCEEEEECCCccc
Confidence 9999999999999999999876 6899999998865
No 434
>KOG0601|consensus
Probab=99.50 E-value=3.7e-14 Score=152.59 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=181.4
Q ss_pred CCeEEeeeecc--cCceeEEEEEE--C--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAK--GTNAVVYEATF--R--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~--G~fG~Vy~a~~--~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
..+.+.+.+|. |.+|.||.+.+ . +..+|+|.=...- . .+.....-.+|+.--..+ .
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s--------------~p~~~~~k~~~~~s~~~i---~ 175 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-S--------------PPLDSKRKLREFLSHHKI---D 175 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-C--------------Cccccccccchhhccccc---C
Confidence 55667788999 99999999888 3 7889999731100 0 001111223344444333 4
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQL 349 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql 349 (588)
.|+|.|+.+..+.. .+.+|+-+|+|+.+|.++......-++....+.++.+.
T Consensus 176 ~~~~~v~~~~~~e~----------------------------~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~ 227 (524)
T KOG0601|consen 176 SHENPVRDSPAWEG----------------------------SGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDW 227 (524)
T ss_pred ccccccccCccccc----------------------------CCcceeeeccccchhHHhhhcccccCCchhhhhHHhhh
Confidence 79999986655544 23499999999999999998766468889999999999
Q ss_pred HH----HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcC
Q psy4039 350 LE----GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALAT 425 (588)
Q Consensus 350 ~~----gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 425 (588)
.. ||.++|+.+|+|-|+||.||++..+. ..++++|||+...+..+.............|..-|++||+..+.
T Consensus 228 ~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~----~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l 303 (524)
T KOG0601|consen 228 LSRDVTALSHLHSNNIVHDDLKPANIFTTSDW----TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL 303 (524)
T ss_pred hhcccccccccCCCcccccccchhheeccccc----ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc
Confidence 99 99999999999999999999998763 57899999999887764432222222333577799999999765
Q ss_pred CCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc--cccccccc-cccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHH
Q psy4039 426 PGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS--ARNTDYEV-NALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELA 502 (588)
Q Consensus 426 ~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~--~~~~~~~~-~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~ 502 (588)
. +...|+||+|.++.+..++..+.... ........ ....++....+.++...+..|++.+|..|++.+.+
T Consensus 304 ~-------~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~ 376 (524)
T KOG0601|consen 304 A-------TFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQIL 376 (524)
T ss_pred c-------chHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHH
Confidence 3 45789999999999999886654332 11111111 12223344556677779999999999999999998
Q ss_pred HH
Q psy4039 503 AT 504 (588)
Q Consensus 503 l~ 504 (588)
.+
T Consensus 377 ~~ 378 (524)
T KOG0601|consen 377 TA 378 (524)
T ss_pred hc
Confidence 88
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.48 E-value=1.8e-13 Score=124.65 Aligned_cols=133 Identities=22% Similarity=0.144 Sum_probs=102.1
Q ss_pred EeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEee
Q psy4039 200 IGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHF 279 (588)
Q Consensus 200 ~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~ 279 (588)
+.+.||+|.++.||++...+..++||.+..... ...+.+|+.+++.+... .+++.+++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~-------------------~~~~~~e~~~~~~l~~~--~~~~p~~~~ 60 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK-------------------GADREREVAILQLLARK--GLPVPKVLA 60 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc-------------------hhHHHHHHHHHHHHHHc--CCCCCeEEE
Confidence 356799999999999999888999999743110 23456788888888321 157777776
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
++... ...+++|||+.| .+..+ +......++.+++++|.+||.
T Consensus 61 ~~~~~----------------------------~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~ 104 (155)
T cd05120 61 SGESD----------------------------GWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQ 104 (155)
T ss_pred EcCCC----------------------------CccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhC
Confidence 65431 138999999954 44332 556677889999999999998
Q ss_pred C---CceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 359 H---RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 359 ~---~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
. +++|+|+||+||+++.. +.++++|||.++.
T Consensus 105 ~~~~~i~H~Dl~~~Nil~~~~-----~~~~l~Df~~~~~ 138 (155)
T cd05120 105 LPLLVLCHGDLHPGNILVDDG-----KILGIIDWEYAGY 138 (155)
T ss_pred CCceEEEecCCCcceEEEECC-----cEEEEEecccccC
Confidence 4 79999999999999975 6899999999865
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=6.4e-13 Score=144.24 Aligned_cols=160 Identities=20% Similarity=0.111 Sum_probs=104.1
Q ss_pred eeecccCceeEEEEEEC-CeeEEEEEEecCCCCc--chHHHHHHHh-------------------hhhcc--cccchhhh
Q psy4039 202 KFIAKGTNAVVYEATFR-GVEYALKMMFNYSAAS--NSHAILKAMS-------------------KELLP--LRKPLRLN 257 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~--~~~~~~k~~~-------------------~e~~~--~~~~~~~~ 257 (588)
+.||.|++|.||+|+++ |+.||||+.++..... .+..+++.+. .|... ..+-++.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999986 8999999986532111 1111111110 11100 11224666
Q ss_pred HHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCC
Q psy4039 258 EDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQ 336 (588)
Q Consensus 258 Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~ 336 (588)
|...+..+....+|.+-|.+-.+|.+.+ ...++||||++ ++|.++.......
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~---------------------------~~~vLvmE~i~G~~L~~~~~~~~~~ 255 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRT---------------------------SERVLTMEWIDGIPLSDIAALDEAG 255 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhc---------------------------CCceEEEEeECCcccccHHHHHhcC
Confidence 7777777654444444445544443311 12689999994 5888776543212
Q ss_pred CCHHHHHHHHHHHHH-HHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 337 LSMHERVLLFTQLLE-GVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 337 l~~~~~~~i~~ql~~-gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
.+ ...++.+++. .+..+|..|++|+|+||.||+++.+ +.++++|||++....
T Consensus 256 ~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~-----g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 256 LD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKD-----GKIIALDFGIVGRLS 308 (437)
T ss_pred CC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCC-----CcEEEEeCCCeeECC
Confidence 32 3456666665 4788999999999999999999877 789999999986654
No 437
>KOG1266|consensus
Probab=99.33 E-value=1.1e-12 Score=131.19 Aligned_cols=198 Identities=21% Similarity=0.233 Sum_probs=131.6
Q ss_pred CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHH
Q psy4039 270 PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRER---CAQLSMHERVLL 345 (588)
Q Consensus 270 ~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i 345 (588)
.|.|||+++.++.+.. +.......++.||+ .|+|.++|+.. ...+....-.++
T Consensus 125 vHsnlvkfH~yw~d~K-----------------------~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw 181 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKK-----------------------YEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKW 181 (458)
T ss_pred HHHHHHHHHHhhcccc-----------------------cccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHH
Confidence 5999999999998853 11222477889999 69999999864 346888888999
Q ss_pred HHHHHHHHHHHHhC--CceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC--CCccccccccccccCCccccchhH
Q psy4039 346 FTQLLEGVTHLNMH--RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS--GLSMQYSSADIELGGNVALMAPEV 421 (588)
Q Consensus 346 ~~ql~~gL~yLH~~--~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~--~~~~~~~~~~~~~~GT~~Y~APE~ 421 (588)
+.||+.||.|||+. .|+|+++..+-|++..+ +-+||+ +.-.... ............-.|-++|.|||.
T Consensus 182 ~tqIlsal~yLhs~~PpiihgnlTc~tifiq~n-----gLIkig---~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~s 253 (458)
T KOG1266|consen 182 CTQILSALSYLHSCDPPIIHGNLTCDTIFIQHN-----GLIKIG---SVAPDSTHPSVNSTREAEKSVNTSLPGFSAPES 253 (458)
T ss_pred HHHHHhhhhhhhccCCccccCCcchhheeecCC-----ceEEec---ccCccccchhhhhhhHhhhhccccCCccccCCc
Confidence 99999999999985 79999999999999966 566653 3221111 000001111112346789999997
Q ss_pred HhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHH
Q psy4039 422 ALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAEL 501 (588)
Q Consensus 422 l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e 501 (588)
-.... .+.++|||+||....||..+..--.+.......+......+-..-..--++++.+|++..|..||+|.+
T Consensus 254 g~~tn------~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~ 327 (458)
T KOG1266|consen 254 GTTTN------TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARL 327 (458)
T ss_pred Ccccc------cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhh
Confidence 54322 345799999999999999876532221111111110000000000112367899999999999999999
Q ss_pred HHH
Q psy4039 502 AAT 504 (588)
Q Consensus 502 ~l~ 504 (588)
++-
T Consensus 328 llf 330 (458)
T KOG1266|consen 328 LLF 330 (458)
T ss_pred hhc
Confidence 776
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.30 E-value=8.3e-12 Score=137.51 Aligned_cols=167 Identities=17% Similarity=0.209 Sum_probs=99.2
Q ss_pred cCCeEEeeeecccCceeEEEEEEC--CeeEEEEEEecCCCCc--chHHHHHHH-------------------hhhh--cc
Q psy4039 195 VDDIQIGKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAAS--NSHAILKAM-------------------SKEL--LP 249 (588)
Q Consensus 195 ~~~~~~~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~--~~~~~~k~~-------------------~~e~--~~ 249 (588)
+.+|+. +.||+|++|.||+|+++ |+.||||++++.-... .+...++.+ ..|. ..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 366776 78999999999999996 7999999997532110 111111111 0010 00
Q ss_pred cccchhhhHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHH
Q psy4039 250 LRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRN 328 (588)
Q Consensus 250 ~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~ 328 (588)
..+-++.+|...+.++.+...+.+.|.+-.+|.+.+ ...++||||+. +.+.+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s---------------------------t~~VLvmE~i~G~~l~d 250 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC---------------------------SETVMVMERMYGIPVSD 250 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC---------------------------CCceEEEeeecCccHHh
Confidence 112234455555555433333444444444443311 13789999994 57876
Q ss_pred HH--HHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 329 YL--RERCA---QLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 329 ~L--~~~~~---~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
+- ...+. .+.+..+..++.|+ ...|++|+|+||.||+++.+.... +.+++.|||++...+.
T Consensus 251 ~~~l~~~g~d~~~la~~~v~~~~~Qi-------f~~GffHaDpHPGNIlv~~~g~~~-~~i~llDFGivg~l~~ 316 (537)
T PRK04750 251 VAALRAAGTDMKLLAERGVEVFFTQV-------FRDGFFHADMHPGNIFVSYDPPEN-PRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHH-------HhCCeeeCCCChHHeEEecCCCCC-CeEEEEecceEEECCH
Confidence 43 22211 23334444444544 358999999999999998772221 4899999999977654
No 439
>KOG0606|consensus
Probab=99.27 E-value=2.2e-12 Score=145.52 Aligned_cols=181 Identities=24% Similarity=0.308 Sum_probs=140.1
Q ss_pred EEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeecccccc
Q psy4039 315 LFILMKKY-NTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 393 (588)
Q Consensus 315 l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~ 393 (588)
++++|+|+ +++|...|+.-+ ..+.+-+...+..+..+++|||...+.|||++|.|+|+..+ +..+++|||...
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~-----gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYD-----GHRPLTDFGTLS 952 (1205)
T ss_pred cchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhccc-----CCcccCcccccc
Confidence 89999999 478998888765 67878888888899999999999999999999999999888 889999998443
Q ss_pred ccCC-----CC-----------------ccccc----cccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHH
Q psy4039 394 TNKS-----GL-----------------SMQYS----SADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAY 447 (588)
Q Consensus 394 ~~~~-----~~-----------------~~~~~----~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ 447 (588)
...- +. ..... .......||+.|.|||...+.. ....+|+|++|++++
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~------hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRR------HGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccccc------CCCcchhhhhhhhhh
Confidence 2111 00 00000 1123457999999999998776 346799999999999
Q ss_pred HHhcCCCCCcccccccccc-----ccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 448 EIFGHDNPFYQSARNTDYE-----VNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 448 ElltG~~Pf~~~~~~~~~~-----~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
|.++|.+||........+. ...++.-+...+.++++++...+..+|.+|..+.....+-.
T Consensus 1027 e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~ 1091 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKG 1091 (1205)
T ss_pred hhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCccccccccc
Confidence 9999999998754433332 23445556677889999999999999999999885555445
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=6e-11 Score=111.47 Aligned_cols=127 Identities=14% Similarity=0.102 Sum_probs=89.6
Q ss_pred eeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE-EEee
Q psy4039 201 GKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV-VMHF 279 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV-~l~~ 279 (588)
.+.|+.|.++.||++...+..|+||+...... ....+.+|+.+++.+ .+.+++ +++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~------------------~~~~~~~E~~~l~~l----~~~~~~P~~~~ 60 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE------------------LLINRENEAENSKLA----AEAGIGPKLYY 60 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc------------------cccCHHHHHHHHHHH----HHhCCCCceEE
Confidence 35789999999999999999999999642110 112345688888877 333333 4443
Q ss_pred eeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy4039 280 AFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM 358 (588)
Q Consensus 280 ~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~ 358 (588)
+..+ .-++|||+++| ++... ......++.+++++|..||+
T Consensus 61 ~~~~------------------------------~~~lv~e~i~G~~l~~~---------~~~~~~~~~~l~~~l~~LH~ 101 (170)
T cd05151 61 FDPE------------------------------TGVLITEFIEGSELLTE---------DFSDPENLEKIAKLLKKLHS 101 (170)
T ss_pred EeCC------------------------------CCeEEEEecCCCccccc---------cccCHHHHHHHHHHHHHHhC
Confidence 3211 14689999965 44322 01123467899999999999
Q ss_pred CCc-----eeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 359 HRT-----AHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 359 ~~I-----vHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
.++ +|+|++|+||+++ + +.++++|||.+..
T Consensus 102 ~~~~~~~~~HgD~~~~Nil~~-~-----~~~~liDf~~a~~ 136 (170)
T cd05151 102 SPLPDLVPCHNDLLPGNFLLD-D-----GRLWLIDWEYAGM 136 (170)
T ss_pred CCCCCceeecCCCCcCcEEEE-C-----CeEEEEecccccC
Confidence 875 9999999999998 4 5789999998854
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.19 E-value=1.2e-10 Score=112.35 Aligned_cols=153 Identities=20% Similarity=0.207 Sum_probs=99.2
Q ss_pred eeeecccCceeEEEEEEC--------CeeEEEEEEecCCCCc-chHHHHHHHhh-h--h-cccccchhh----hHHHHHh
Q psy4039 201 GKFIAKGTNAVVYEATFR--------GVEYALKMMFNYSAAS-NSHAILKAMSK-E--L-LPLRKPLRL----NEDMLMN 263 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~--------g~~vAVK~i~~~~~~~-~~~~~~k~~~~-e--~-~~~~~~~~~----~Ei~il~ 263 (588)
...||.|-=+.||.|... +..+|||+.+..-... +....++.-.+ + . .....+.+. +|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357999999999999765 3699999986432211 11111110000 0 0 001122233 7999999
Q ss_pred hhcCCC-CCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCc-H-HHHHHHhcCCCCHH
Q psy4039 264 SVENLP-PHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTD-L-RNYLRERCAQLSMH 340 (588)
Q Consensus 264 ~l~~l~-~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gs-L-~~~L~~~~~~l~~~ 340 (588)
++.... .-|.++ ++ . .-++||||++++ + ...+++. .++..
T Consensus 82 rl~~~Gv~vP~pi---~~-~-------------------------------~~~lvME~Ig~~~~~~~~Lkd~--~~~~~ 124 (197)
T cd05146 82 RMQKAGIPCPEVV---VL-K-------------------------------KHVLVMSFIGDDQVPAPKLKDA--KLNDE 124 (197)
T ss_pred HHHHcCCCCCeEE---Ee-c-------------------------------CCEEEEEEcCCCCccchhhhcc--ccCHH
Confidence 885432 344443 32 1 157899999652 2 2223332 45666
Q ss_pred HHHHHHHHHHHHHHHH-HhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 341 ERVLLFTQLLEGVTHL-NMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 341 ~~~~i~~ql~~gL~yL-H~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
+...+..+++.+|..| |..||||+||++.|||+++ +.+.|+|||.|....
T Consensus 125 ~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~------~~v~iIDF~qav~~~ 175 (197)
T cd05146 125 EMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD------GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC------CcEEEEECCCceeCC
Confidence 7788899999999999 8999999999999999974 478999999885543
No 442
>KOG0601|consensus
Probab=99.19 E-value=2.6e-11 Score=130.89 Aligned_cols=248 Identities=19% Similarity=0.170 Sum_probs=168.9
Q ss_pred ccccCCeEEeeeecccCceeEEEEEEC---CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCC
Q psy4039 192 DVKVDDIQIGKFIAKGTNAVVYEATFR---GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENL 268 (588)
Q Consensus 192 ~i~~~~~~~~~~IG~G~fG~Vy~a~~~---g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l 268 (588)
.....+|.....||.|.|+.|+.+..+ +..|++|...+..... . ....-..|+.+...+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~---------~------~di~sl~ev~l~~~l--- 322 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF---------A------SDIFSLGEVILEAIL--- 322 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch---------H------hhhcchhhhhHhhHh---
Confidence 345577899999999999999998755 6789999875422211 1 111223355555544
Q ss_pred CCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC-CCcHHHHHHHhcCCCCHHHHHHHHH
Q psy4039 269 PPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY-NTDLRNYLRERCAQLSMHERVLLFT 347 (588)
Q Consensus 269 ~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~-~gsL~~~L~~~~~~l~~~~~~~i~~ 347 (588)
..|.+++..+..+.. ....|+=.||| ++++...+. ....+++...+.+..
T Consensus 323 ~~~~~~~g~~~~W~~----------------------------~r~~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~ 373 (524)
T KOG0601|consen 323 GSHLPSVGKNSSWSQ----------------------------LRQGYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTA 373 (524)
T ss_pred hcccccCCCCCCccc----------------------------cccccCchhhhcCcchhhhhH-HHHhcCcchhhhhHH
Confidence 468888876544433 33466778899 555554442 222688899999999
Q ss_pred HHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCcccc-chhHHhcCC
Q psy4039 348 QLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALM-APEVALATP 426 (588)
Q Consensus 348 ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 426 (588)
|++.++.++|+..++|+|+||+||++..+. +..+++|||++........ ...++-.++ .+|++....
T Consensus 374 q~~~~l~~i~s~~~~~~d~~psni~i~~~~----~~~~~~~~~~~t~~~~~~~--------~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 374 QILTALNVIHSKLFVHLDVKPSNILISNDG----FFSKLGDFGCWTRLAFSSG--------VFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred HHHhccccccchhhhcccccccceeeccch----hhhhccccccccccceecc--------cccccccccccchhhcccc
Confidence 999999999999999999999999998753 5678999999864221110 122333455 355554332
Q ss_pred CCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 427 GLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 427 ~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
. +..+.|++|||..+.|.+++.+--........+.....+..+ ....+++.+.+.++..++..||.+.+...
T Consensus 442 ~-----~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 442 P-----HLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred c-----cccccccccccccccccccCcccCcccccceeeecccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcc
Confidence 1 457899999999999999987543333333333333333333 34488899999999999999999887655
No 443
>KOG3087|consensus
Probab=99.09 E-value=1.6e-09 Score=101.22 Aligned_cols=151 Identities=23% Similarity=0.285 Sum_probs=106.5
Q ss_pred EeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC-CCCceEEEe
Q psy4039 200 IGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP-PHPNVVVMH 278 (588)
Q Consensus 200 ~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~-~HpNIV~l~ 278 (588)
...+|-+|+=+.|+++.+.|+.+.||.=+....-+... . ..+.+++-.+|++++.++..+. .-|-++
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~L---D------~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~--- 78 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPAL---D------QKLTRKRTKQEARLLAKCRALGIPAPRLI--- 78 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHH---H------HHHHHHHHHHHHHHHHHHHHhCCCCceEE---
Confidence 56778899999999999999999999743322222110 0 1123445567999999885553 233332
Q ss_pred eeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC--cHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHH
Q psy4039 279 FAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT--DLRNYLRERCAQLSMHE-RVLLFTQLLEGVTH 355 (588)
Q Consensus 279 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g--sL~~~L~~~~~~l~~~~-~~~i~~ql~~gL~y 355 (588)
+.|.. .-.++|||.+| ++.+++......-++.. ...+++.+-+.+.-
T Consensus 79 --~~D~~----------------------------~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igk 128 (229)
T KOG3087|consen 79 --FIDTY----------------------------GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGK 128 (229)
T ss_pred --EEecC----------------------------CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHH
Confidence 22210 24689999987 89999987633333333 37899999999999
Q ss_pred HHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 356 LNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 356 LH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
||.++|||+||-.+||++.++... ..+.++|||++..
T Consensus 129 lH~ndiiHGDLTTSNill~~~~~~--~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 129 LHDNDIIHGDLTTSNILLRSDGNQ--ITPILIDFGLSSV 165 (229)
T ss_pred hhhCCeecccccccceEEecCCCc--CceEEEeecchhc
Confidence 999999999999999999877432 4568999999744
No 444
>KOG1243|consensus
Probab=98.98 E-value=8.9e-09 Score=112.59 Aligned_cols=179 Identities=17% Similarity=0.181 Sum_probs=119.6
Q ss_pred HHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCC
Q psy4039 258 EDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQL 337 (588)
Q Consensus 258 Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l 337 (588)
-++-|+.+ +||||+++++.++.. +.+|+|+|.+. -|..+++..
T Consensus 59 A~k~lKtl----RHP~Il~yL~t~e~~----------------------------~~~ylvTErV~-Pl~~~lk~l---- 101 (690)
T KOG1243|consen 59 AVKRLKTL----RHPNILSYLDTTEEE----------------------------GTLYLVTERVR-PLETVLKEL---- 101 (690)
T ss_pred HHHHhhhc----cCchhhhhhhhhccc----------------------------CceEEEeeccc-cHHHHHHHh----
Confidence 34445554 999999999887653 14999999883 266666643
Q ss_pred CHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccc
Q psy4039 338 SMHERVLLFTQLLEGVTHLN-MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVAL 416 (588)
Q Consensus 338 ~~~~~~~i~~ql~~gL~yLH-~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y 416 (588)
+.......+.||+.||.||| ..+++|++|.-+.|+++.. +..||++|-++.....-.... . ...--..|
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~-----GeWkLggle~v~~~~~~~~~~---~--~~~~~~s~ 171 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNES-----GEWKLGGLELVSKASGFNAPA---K--SLYLIESF 171 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCC-----CcEEEeeeEEEeccccCCccc---c--cchhhhcc
Confidence 36777788999999999998 5799999999999999998 899999999886543311100 0 11112256
Q ss_pred cchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCC
Q psy4039 417 MAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDR 496 (588)
Q Consensus 417 ~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~R 496 (588)
..|+.+.... -..|.|-|||++||++.|..+-..+. .....+|.....+-.+-+--.+.+|
T Consensus 172 ~~P~~~~~s~--------~s~D~~~Lg~li~el~ng~~~~~~~~-----------~~~~~ipk~~~~~~~k~~~~~~~~r 232 (690)
T KOG1243|consen 172 DDPEEIDPSE--------WSIDSWGLGCLIEELFNGSLLTKTDL-----------SNTGKIPKALIELYCKKLGATELKR 232 (690)
T ss_pred cChhhcCccc--------cchhhhhHHHHHHHHhCcccCcchhh-----------hccCccchhHHHHHHHHhccccccc
Confidence 7777653221 12699999999999999833211111 1223444444455545555567778
Q ss_pred CCHHHH
Q psy4039 497 PSAELA 502 (588)
Q Consensus 497 ps~~e~ 502 (588)
|.....
T Consensus 233 ~n~~~~ 238 (690)
T KOG1243|consen 233 PNKLRF 238 (690)
T ss_pred cchhhH
Confidence 774433
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=1.5e-08 Score=95.27 Aligned_cols=138 Identities=22% Similarity=0.257 Sum_probs=94.5
Q ss_pred eeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeee
Q psy4039 202 KFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAF 281 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~ 281 (588)
..|++|+=+.||.+.+.|.++.+|.=-+...-.... -. ......-.+|..++..+.... =+...++++.
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~L--D~-------klrr~Rt~~Earil~~a~~~G--V~~P~v~dvD 70 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPEL--DE-------KLRRERTRREARILAKAREAG--VPVPIVYDVD 70 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHH--HH-------HHHHHHHHHHHHHHHHHHHcC--CCCCeEEEEc
Confidence 458899999999999888887777532211111110 01 113344567999998875442 1222334332
Q ss_pred eccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy4039 282 TDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHR 360 (588)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~ 360 (588)
.+ ...|+|||.+| .|.+++... ...++..+-.-+.-||..|
T Consensus 71 ~~------------------------------~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~g 112 (204)
T COG3642 71 PD------------------------------NGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAG 112 (204)
T ss_pred CC------------------------------CCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcC
Confidence 21 26799999976 566677654 2567777777888899999
Q ss_pred ceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 361 TAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 361 IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
|+|+||.++||++..+ .+.++|||++..
T Consensus 113 ivHGDLTtsNiIl~~~------~i~~IDfGLg~~ 140 (204)
T COG3642 113 IVHGDLTTSNIILSGG------RIYFIDFGLGEF 140 (204)
T ss_pred eecCCCccceEEEeCC------cEEEEECCcccc
Confidence 9999999999999865 588999999864
No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.84 E-value=4.5e-08 Score=99.43 Aligned_cols=153 Identities=14% Similarity=0.075 Sum_probs=98.8
Q ss_pred eeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCC-CCCceEEEeeeeeccCCCC
Q psy4039 210 AVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLP-PHPNVVVMHFAFTDFVPSI 288 (588)
Q Consensus 210 G~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~-~HpNIV~l~~~~~~~~~~~ 288 (588)
..|++..+.|+.|.||..... ....+.+.+..- ......+.+|...+..+.... .-|.+|-+ .+...
T Consensus 36 rrvvr~~~~g~~~~vKr~~~~----~~~~~~k~l~~~--~~p~~~a~rE~~~l~~L~~~GIptP~pVa~---~e~~~--- 103 (268)
T PRK15123 36 RRTLRFELAGKSYFLKWHRGT----GWGEIFKNLLSL--RMPVLGADREWRAIHRLHEVGVDTMTGVAF---GERGS--- 103 (268)
T ss_pred ceEEEEEECCEEEEEEEecCC----cHHHHhhhhccc--ccccHHHHHHHHHHHHHHHcCCCCCCeeEE---EEecC---
Confidence 346678888999999986321 111222322210 011223667888887774332 34444433 32210
Q ss_pred CCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC--cHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCceecc
Q psy4039 289 PDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT--DLRNYLRER-CAQLSMHERVLLFTQLLEGVTHLNMHRTAHRD 365 (588)
Q Consensus 289 ~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g--sL~~~L~~~-~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrD 365 (588)
.+....-++|||++++ +|.+++... ....+......++.+++..+.-||..||+|+|
T Consensus 104 --------------------~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgD 163 (268)
T PRK15123 104 --------------------NPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRD 163 (268)
T ss_pred --------------------CCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCC
Confidence 0112247899999965 799998642 22566778889999999999999999999999
Q ss_pred CCCCcEEEcCCC--CCCCCceeeeccccccc
Q psy4039 366 LKSDNILLDCSE--DNTCPQLVITDFGSSYT 394 (588)
Q Consensus 366 LKp~NILld~~~--~~~~~~vkL~DFGla~~ 394 (588)
++++|||++.+. .+....+.|+||+.++.
T Consensus 164 L~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 164 CYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred CChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999999998520 01116789999998753
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.84 E-value=8.3e-09 Score=99.10 Aligned_cols=144 Identities=22% Similarity=0.154 Sum_probs=81.7
Q ss_pred eEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhh---------hcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 211 VVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKE---------LLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 211 ~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e---------~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
-||.|... |..+|||+.+..............-... .....+....+|...|..+.... -++.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G--v~vP~p~~~ 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG--VPVPKPYDY 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT---SS--EEEE
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC--ccCCcEEEE
Confidence 38999885 8899999987543222211100000000 01111223456889999884332 133344433
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC--CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HH
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN--TDLRNYLRERCAQLSMHERVLLFTQLLEGVTH-LN 357 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~--gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y-LH 357 (588)
.. -.+||||++ |.....|.+. .++......++.+++..+.. +|
T Consensus 79 ~~--------------------------------~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~ 124 (188)
T PF01163_consen 79 NR--------------------------------NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLH 124 (188)
T ss_dssp ET--------------------------------TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHH
T ss_pred eC--------------------------------CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHH
Confidence 11 469999997 7433444433 33345667788888886666 57
Q ss_pred hCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 358 MHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 358 ~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
..||+|+||.+.|||++++ .+.|+|||.|....
T Consensus 125 ~~givHGDLs~~NIlv~~~------~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 125 KAGIVHGDLSEYNILVDDG------KVYIIDFGQAVDSS 157 (188)
T ss_dssp CTTEEESS-STTSEEEETT------CEEE--GTTEEETT
T ss_pred hcCceecCCChhhEEeecc------eEEEEecCcceecC
Confidence 9999999999999999865 78999999886543
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.83 E-value=1.7e-07 Score=97.51 Aligned_cols=178 Identities=14% Similarity=0.181 Sum_probs=119.8
Q ss_pred EEEEEecCCC--cHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeee
Q psy4039 315 LFILMKKYNT--DLRNYLRER-----CAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVIT 387 (588)
Q Consensus 315 l~lvme~~~g--sL~~~L~~~-----~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~ 387 (588)
.-++|....| -...+++-. -...+|.....+++.++.+.+-||+.|.+-+|+.++|+|+.++ ..++|.
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~-----~~V~LV 159 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD-----SKVVLV 159 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC-----ceEEEE
Confidence 6677888743 344444311 1247899999999999999999999999999999999999988 678887
Q ss_pred ccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCC-CCCcCchhhHHHHHHHHhcC-CCCCcccc-----
Q psy4039 388 DFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFV-NYSKSDAWTAGTVAYEIFGH-DNPFYQSA----- 460 (588)
Q Consensus 388 DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~-~~~ksDVwS~Gvil~ElltG-~~Pf~~~~----- 460 (588)
|=..-....++... ...+|...|.+||.-.-. ++... -+...|.|.+||++++++.| +.||.+-.
T Consensus 160 dsDsfqi~~ng~~~------~cpVg~~eftPPElQ~~~--sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 160 DSDSFQINANGTLH------LCPVGVSEFTPPELQTLP--SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred cccceeeccCCceE------ecccCccccCCHHHhccc--cccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 75433222222211 145789999999986511 12211 22458999999999999876 99997721
Q ss_pred --------ccccc--cc----cccC----CCCCCccHHHHHHHHHhhhh--CCCCCCCHHHHHHH
Q psy4039 461 --------RNTDY--EV----NALP----QLNTNVPEVMRRLVAKLLEN--DPSDRPSAELAATV 505 (588)
Q Consensus 461 --------~~~~~--~~----~~~~----~~~~~~~~~l~~Li~~~L~~--dP~~Rps~~e~l~~ 505 (588)
....+ .. ...+ .-+.-+|++++.|..+|+.. ++.-|||++.-+..
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aA 296 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAA 296 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Confidence 01111 00 0010 11234678999999999964 36789998754443
No 449
>KOG2137|consensus
Probab=98.82 E-value=3.1e-09 Score=116.52 Aligned_cols=156 Identities=19% Similarity=0.348 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccc----cccC
Q psy4039 338 SMHERVLLFTQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADI----ELGG 412 (588)
Q Consensus 338 ~~~~~~~i~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~----~~~G 412 (588)
..+....=+.+++.|+.|+|. .++||+.|.|++|.++.. +..||+.|+++.....+...++...+. -..-
T Consensus 97 aTe~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~-----~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~ 171 (700)
T KOG2137|consen 97 ATEDGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNAN-----GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQP 171 (700)
T ss_pred cccHhhhhhhcccchhhhhccCcceeecccchhheeeccC-----cceeeccchhhhccCCCCccccccCCCCCChhhcc
Confidence 334455556677799999997 599999999999999988 889999999987655533322211110 1123
Q ss_pred CccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhc-CCCCCcccccccccc------ccccCCCCCCccHHHHHHH
Q psy4039 413 NVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFG-HDNPFYQSARNTDYE------VNALPQLNTNVPEVMRRLV 485 (588)
Q Consensus 413 T~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~Ellt-G~~Pf~~~~~~~~~~------~~~~~~~~~~~~~~l~~Li 485 (588)
...|.|||++.... .+.++|+||+||++|.+.. |+.-+........+. ....-.....+|+++++-+
T Consensus 172 ~~~f~apE~~~~~~------~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l 245 (700)
T KOG2137|consen 172 HLNFLAPEYLLGTT------NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESL 245 (700)
T ss_pred Ccccccchhhcccc------ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHH
Confidence 45799999997754 4578999999999999994 444443321111110 1111123468999999999
Q ss_pred HHhhhhCCCCCCCHHHHHH
Q psy4039 486 AKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 486 ~~~L~~dP~~Rps~~e~l~ 504 (588)
.+++..++..||++.++..
T Consensus 246 ~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 246 KKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHHhcCCcccCcchhhhhc
Confidence 9999999999998888766
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.77 E-value=3.2e-08 Score=96.76 Aligned_cols=145 Identities=18% Similarity=0.147 Sum_probs=97.0
Q ss_pred eeecccCceeEEEEEECC-eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 202 KFIAKGTNAVVYEATFRG-VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~g-~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
+.|+.|.++.||++...+ ..++||+....... .....+..|..+++.+... +.++.+++.+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~----------------~~~~~~~~E~~~~~~l~~~--~~~vp~~~~~ 65 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL----------------PSAHDVAREYRVLRALAGT--GVPVPKVLAL 65 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC----------------cccccHHHHHHHHHHhhCC--CCCCCCEEEE
Confidence 568999999999998875 89999997432110 0233466788999887321 2334455544
Q ss_pred eeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q psy4039 281 FTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM- 358 (588)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~- 358 (588)
.... + ..+..++|||+++| ++.+.+.. ..+++.+...++.+++++|.+||+
T Consensus 66 ~~~~-----------------------~--~~~~~~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~ 118 (223)
T cd05154 66 CEDP-----------------------S--VLGTPFYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSV 118 (223)
T ss_pred CCCC-----------------------C--ccCCceEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence 3321 0 01136899999954 55543321 156777777778888888888773
Q ss_pred -------------------------------------------------------CCceeccCCCCcEEEcCCCCCCCCc
Q psy4039 359 -------------------------------------------------------HRTAHRDLKSDNILLDCSEDNTCPQ 383 (588)
Q Consensus 359 -------------------------------------------------------~~IvHrDLKp~NILld~~~~~~~~~ 383 (588)
..++|+|+.|.||+++.+.. ..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~---~~ 195 (223)
T cd05154 119 DPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEP---RV 195 (223)
T ss_pred ChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCC---cE
Confidence 24699999999999987311 56
Q ss_pred eeeeccccccc
Q psy4039 384 LVITDFGSSYT 394 (588)
Q Consensus 384 vkL~DFGla~~ 394 (588)
+.|+||+.+..
T Consensus 196 ~~iID~e~~~~ 206 (223)
T cd05154 196 VAVLDWELATL 206 (223)
T ss_pred EEEEecccccc
Confidence 78999998754
No 451
>KOG0690|consensus
Probab=98.63 E-value=1.9e-08 Score=100.88 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=54.8
Q ss_pred HHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccc
Q psy4039 60 NARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSM 121 (588)
Q Consensus 60 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~ 121 (588)
-|..||+++|.+|||+| +|.||.+|.| ++++.|+|.|||||-| .+.|||.+||.+||...
T Consensus 398 LLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqV--tSetDTryFD~EFT~q~ 465 (516)
T KOG0690|consen 398 LLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQV--TSETDTRYFDEEFTSQP 465 (516)
T ss_pred HHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCc--ccccchhhhhhhhhcce
Confidence 47889999999999999 9999999999 8999999999999988 67789999999997543
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.63 E-value=2.3e-07 Score=90.82 Aligned_cols=80 Identities=23% Similarity=0.295 Sum_probs=67.3
Q ss_pred ceEEEEEecCCC--cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccc
Q psy4039 313 MSLFILMKKYNT--DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFG 390 (588)
Q Consensus 313 ~~l~lvme~~~g--sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFG 390 (588)
..-++|+|++.+ +|.+++.... .++......++.+++..+.-||+.||+|+|+++.|||++.+. ....+.++||+
T Consensus 90 ~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~--~~~~~~lIDld 166 (206)
T PF06293_consen 90 YRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD--GQYRFYLIDLD 166 (206)
T ss_pred eeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC--CceeEEEEcch
Confidence 357899999954 7999998743 377788899999999999999999999999999999999873 11479999999
Q ss_pred ccccc
Q psy4039 391 SSYTN 395 (588)
Q Consensus 391 la~~~ 395 (588)
-++..
T Consensus 167 ~~~~~ 171 (206)
T PF06293_consen 167 RMRFR 171 (206)
T ss_pred hceeC
Confidence 87653
No 453
>KOG3741|consensus
Probab=98.61 E-value=1e-06 Score=94.01 Aligned_cols=218 Identities=16% Similarity=0.140 Sum_probs=146.5
Q ss_pred CceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeeeeeccC
Q psy4039 208 TNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFTDFV 285 (588)
Q Consensus 208 ~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~~~~ 285 (588)
-..+.|++... |..|++|++......+-. ....-++.++++ .|+|||++.++|....
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n-----------------k~t~lve~wkkl----~h~NvV~frevf~t~t 346 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN-----------------KDTSLVEAWKKL----CHTNVVPFREVFLTYT 346 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc-----------------cchHHHHHHHHh----ccCceeehhhhhhhhc
Confidence 34678999886 899999998321111100 001124456665 8999999999998532
Q ss_pred CCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC--CcHHHHHHHh--------------cCCCCHHHHHHHHHHH
Q psy4039 286 PSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN--TDLRNYLRER--------------CAQLSMHERVLLFTQL 349 (588)
Q Consensus 286 ~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~--gsL~~~L~~~--------------~~~l~~~~~~~i~~ql 349 (588)
-...++++|++|+. ++|.++-... +...+++..|.++.|+
T Consensus 347 ------------------------F~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QL 402 (655)
T KOG3741|consen 347 ------------------------FGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQL 402 (655)
T ss_pred ------------------------cCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHH
Confidence 11225999999994 5777765321 2357889999999999
Q ss_pred HHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCc
Q psy4039 350 LEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLF 429 (588)
Q Consensus 350 ~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 429 (588)
..||.++|+.|..-+-|.|.+||++.+ .+++|+--|..-....+. + |-+.+.
T Consensus 403 taaL~sIHssGLAck~L~~~kIlv~G~-----~RIriS~C~i~Dvl~~d~------------~-------~~le~~---- 454 (655)
T KOG3741|consen 403 TAALYSIHSSGLACKTLDLKKILVTGK-----MRIRISGCGIMDVLQEDP------------T-------EPLESQ---- 454 (655)
T ss_pred HHHHHHHHhcCceeecccHhHeEeeCc-----ceEEEecccceeeecCCC------------C-------cchhHH----
Confidence 999999999999999999999999977 677776555443322211 0 112211
Q ss_pred cCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHHHHh
Q psy4039 430 SFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAATVCQ 507 (588)
Q Consensus 430 ~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~~L~ 507 (588)
.+-|.=.||.+++-|.||..--. ............+-..++.+++++|.-+...++++ -+..+++...-
T Consensus 455 -----Qq~D~~~lG~ll~aLAt~~~ns~---~~d~~~~s~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~ 523 (655)
T KOG3741|consen 455 -----QQNDLRDLGLLLLALATGTENSN---RTDSTQSSHLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIG 523 (655)
T ss_pred -----hhhhHHHHHHHHHHHhhcccccc---cccchHHHHHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHH
Confidence 23688899999999999854311 11111111122344578899999999998888886 67777766443
No 454
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=6.6e-07 Score=86.87 Aligned_cols=150 Identities=10% Similarity=0.078 Sum_probs=108.6
Q ss_pred ecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhc-ccccchhhhHHHHHhhhcCCCCCCceEEEeeeee
Q psy4039 204 IAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELL-PLRKPLRLNEDMLMNSVENLPPHPNVVVMHFAFT 282 (588)
Q Consensus 204 IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~-~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~~~ 282 (588)
-|+||-+-|++-.+.|..+=||.-.++- .+... +.....+.+|+..++.+..+. =| +.+.. ++.
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl------------~~s~r~P~g~ptf~rE~~~L~~L~~~G-vP-VP~pv-f~~ 90 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHL------------FHSVRYPFGRPTIVREVAVIKELERAG-VI-VPKIV-FGE 90 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcc------------cccccCCCCchHHHHHHHHHHHHHHcC-CC-CCccc-eee
Confidence 4778999999998888888899863221 11111 557778889999998885432 12 33333 222
Q ss_pred ccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC--CcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy4039 283 DFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN--TDLRNYLRERC-AQLSMHERVLLFTQLLEGVTHLNMH 359 (588)
Q Consensus 283 ~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~--gsL~~~L~~~~-~~l~~~~~~~i~~ql~~gL~yLH~~ 359 (588)
.. ..+....-+||+|.++ -+|.+++.+.. .+.+..+...++.++++.+.-||..
T Consensus 91 ~~-----------------------k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~ 147 (216)
T PRK09902 91 AV-----------------------KIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV 147 (216)
T ss_pred ee-----------------------ccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC
Confidence 11 1111335889999886 59999987642 3568888899999999999999999
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
|+.|+|+-+.|||++.++. ..++++||.-++.
T Consensus 148 Gv~Hgdly~khIll~~~g~---~~v~lIDlEk~r~ 179 (216)
T PRK09902 148 NRQHGCCYVRHIYVKTEGK---AEAGFLDLEKSRR 179 (216)
T ss_pred CCcCCCCCHhheeecCCCC---eeEEEEEhhccch
Confidence 9999999999999986521 4599999997765
No 455
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.39 E-value=1.2e-06 Score=87.15 Aligned_cols=148 Identities=19% Similarity=0.145 Sum_probs=97.6
Q ss_pred EEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHH-----hhhhcccccchhhhHHHHHhhhcCCCCCC
Q psy4039 199 QIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAM-----SKELLPLRKPLRLNEDMLMNSVENLPPHP 272 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~-----~~e~~~~~~~~~~~Ei~il~~l~~l~~Hp 272 (588)
.++.+||.|-=|.||.|... |.++|||.=+.+..+......-+.. ...+.-..+....+|.++|+.| ||
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L-----~~ 168 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRL-----YP 168 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHh-----hh
Confidence 45788999999999999997 9999999865432221111001111 1112223344456789999887 33
Q ss_pred c---eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCc-HHHHHHHhcCCCCHHHHHHHHHH
Q psy4039 273 N---VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTD-LRNYLRERCAQLSMHERVLLFTQ 348 (588)
Q Consensus 273 N---IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gs-L~~~L~~~~~~l~~~~~~~i~~q 348 (588)
- +.+-+++ ..-.+|||+.+|- |... +++.+..-.++..
T Consensus 169 ~G~~VP~P~~~--------------------------------nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~ 210 (304)
T COG0478 169 EGVKVPKPIAW--------------------------------NRHAVVMEYIEGVELYRL------RLDVENPDEILDK 210 (304)
T ss_pred cCCCCCCcccc--------------------------------ccceeeeehcccceeecc------cCcccCHHHHHHH
Confidence 2 2121111 1257899999763 2211 3345556667777
Q ss_pred HHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 349 LLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 349 l~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
|++-+.-+-+.||||+|+.+=||+++++ +.+.++||-.+..
T Consensus 211 il~~~~~~~~~GiVHGDlSefNIlV~~d-----g~~~vIDwPQ~v~ 251 (304)
T COG0478 211 ILEEVRKAYRRGIVHGDLSEFNILVTED-----GDIVVIDWPQAVP 251 (304)
T ss_pred HHHHHHHHHHcCccccCCchheEEEecC-----CCEEEEeCccccc
Confidence 7777777779999999999999999998 8899999987643
No 456
>KOG0694|consensus
Probab=98.36 E-value=1.6e-07 Score=102.81 Aligned_cols=63 Identities=16% Similarity=0.247 Sum_probs=56.7
Q ss_pred HHhHHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccc
Q psy4039 57 YFQNARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSM 121 (588)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~ 121 (588)
.-.-+|+||.|||..|||+| +++|||.|+| ++|++|+|+|||+|-+--.. |+++||.+||..-
T Consensus 595 a~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~--D~snFd~eFt~e~ 665 (694)
T KOG0694|consen 595 AIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPE--DVSNFDEEFTSEK 665 (694)
T ss_pred HHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcccCChh--hhcccchhhhcCC
Confidence 45669999999999999997 9999999999 99999999999999997666 8889999998654
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.36 E-value=2.4e-06 Score=93.96 Aligned_cols=161 Identities=17% Similarity=0.182 Sum_probs=98.0
Q ss_pred eeecccCceeEEEEEEC-CeeEEEEEEecCCCCc--chHHHHHHHhhhh---ccc------------------ccchhhh
Q psy4039 202 KFIAKGTNAVVYEATFR-GVEYALKMMFNYSAAS--NSHAILKAMSKEL---LPL------------------RKPLRLN 257 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~--~~~~~~k~~~~e~---~~~------------------~~~~~~~ 257 (588)
+.|+.++-|.||+|+++ |+.||||+.+++-... .+...++.+.+-. .+. .+-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999998 9999999987643221 1222222222111 111 1223455
Q ss_pred HHHHHhhhcCCCC-CCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcC
Q psy4039 258 EDMLMNSVENLPP-HPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCA 335 (588)
Q Consensus 258 Ei~il~~l~~l~~-HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~ 335 (588)
|...+.++.+... .|+| ++-.+|.+.+ ..-.++|||++| .+.+...-...
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t---------------------------~~~VLtmE~i~Gi~i~d~~~l~~~ 262 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYT---------------------------TRRVLTMEWIDGIKISDIAALKSA 262 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-Eeceeehhcc---------------------------CCcEEEEEeeCCEecccHHHHHhc
Confidence 6666666654433 3443 3433333211 126899999976 56666332222
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 336 QLSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 336 ~l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
.++.........++. +..+-..|++|.|..|.||+++.+ +.+.+.|||+....+.
T Consensus 263 g~d~k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~-----g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 263 GIDRKELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSD-----GRIVLLDFGIVGRLDP 317 (517)
T ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCccceEEecC-----CcEEEEcCcceecCCH
Confidence 556333332222221 333445899999999999999988 8999999999876554
No 458
>KOG0598|consensus
Probab=98.30 E-value=3.2e-07 Score=94.01 Aligned_cols=67 Identities=22% Similarity=0.199 Sum_probs=58.6
Q ss_pred hHHHHHHHHhhhhhhcCC-chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccccchhhH
Q psy4039 59 QNARKLFVNSLLNRVTNS-MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSMASDLRR 127 (588)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (588)
..+++|+++||.+|||+. ++++||+|+| ++|++|+++|||+|-++... ++..||++||...+++++.
T Consensus 255 dll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~--~~~~Fd~eft~~~~~~~~~ 328 (357)
T KOG0598|consen 255 DLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLE--DTSNFDNEFTSYTVDYSPV 328 (357)
T ss_pred HHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCcc--ccccccHHHHhccccCCcc
Confidence 449999999999999843 9999999999 99999999999999998777 7888999998876665554
No 459
>KOG1235|consensus
Probab=98.06 E-value=2.6e-05 Score=85.77 Aligned_cols=162 Identities=18% Similarity=0.155 Sum_probs=95.4
Q ss_pred eeecccCceeEEEEEEC-CeeEEEEEEecCCCCc--chHHHHH----------------HHhhhhc--ccccchhhhHHH
Q psy4039 202 KFIAKGTNAVVYEATFR-GVEYALKMMFNYSAAS--NSHAILK----------------AMSKELL--PLRKPLRLNEDM 260 (588)
Q Consensus 202 ~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~--~~~~~~k----------------~~~~e~~--~~~~~~~~~Ei~ 260 (588)
+.||.-+.|.||+|+.+ |+.||||+-++.-... .+...++ .+..|.. -..+-+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 57999999999999998 7889999965422111 0001111 1111111 112334556666
Q ss_pred HHhhhcCCCCCCc---eEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC----cHHHHHHHh
Q psy4039 261 LMNSVENLPPHPN---VVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT----DLRNYLRER 333 (588)
Q Consensus 261 il~~l~~l~~HpN---IV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g----sL~~~L~~~ 333 (588)
-..++.+...|-+ =|.+-.+|.+. ...-.++|||++| +| ++|.+.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~---------------------------st~RVLtME~~~G~~i~Dl-~~i~~~ 298 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDL---------------------------STKRVLTMEYVDGIKINDL-DAIDKR 298 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhc---------------------------CcceEEEEEecCCccCCCH-HHHHHc
Confidence 5555544445666 12222232221 1137899999965 44 455555
Q ss_pred cCCCCHHHHHHHHHHHHHHHH-HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCC
Q psy4039 334 CAQLSMHERVLLFTQLLEGVT-HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKS 397 (588)
Q Consensus 334 ~~~l~~~~~~~i~~ql~~gL~-yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~ 397 (588)
.++...+ +..+.++.. -+=..|++|.|=.|.||+++.+.+.. ..+.+-|||+......
T Consensus 299 --gi~~~~i---~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~-~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 299 --GISPHDI---LNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGD-EEIVLLDHGLYAVISH 357 (538)
T ss_pred --CCCHHHH---HHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCC-ccEEEEcccccccccH
Confidence 5665533 333333322 22346899999999999999653222 7899999999877655
No 460
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.06 E-value=5.6e-05 Score=73.87 Aligned_cols=152 Identities=16% Similarity=0.118 Sum_probs=93.9
Q ss_pred CCeEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE
Q psy4039 196 DDIQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV 275 (588)
Q Consensus 196 ~~~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV 275 (588)
.+|...+++-......|.+-...|..+.+|..++.... ....++.+. ......+++..+..+... .--...
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r--~er~~~sf~------kg~~~~~l~~~~~~i~~~-g~~~~~ 101 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRR--PERRFKSFF------KGSEYSRLINNTDKIRNE-GFTEPA 101 (229)
T ss_pred CCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhh--HHHHHHHHh------ccHHHHHHHHHHHHHHHc-Cccccc
Confidence 77888888888888889988888999999997542211 111112222 223334455544444211 112222
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVT 354 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~ 354 (588)
.++.+.+.. ...-....+++|||++| .|.+.. .+++ .+...+.+++.
T Consensus 102 ~~yl~~ekk-----------------------~~~~~~~~~ll~EYIeG~~l~d~~-----~i~e----~~~~ki~~~ik 149 (229)
T PF06176_consen 102 DPYLAAEKK-----------------------IFRYTSSYVLLMEYIEGVELNDIE-----DIDE----DLAEKIVEAIK 149 (229)
T ss_pred cceeeeeee-----------------------eccceeEEEEEEEEecCeecccch-----hcCH----HHHHHHHHHHH
Confidence 222222221 11112246789999965 555442 2232 24466778899
Q ss_pred HHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 355 HLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 355 yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
-||+.|+.|+|..|.|++++++ .++++||+..+.
T Consensus 150 qlH~~G~~HGD~hpgNFlv~~~------~i~iID~~~k~~ 183 (229)
T PF06176_consen 150 QLHKHGFYHGDPHPGNFLVSNN------GIRIIDTQGKRM 183 (229)
T ss_pred HHHHcCCccCCCCcCcEEEECC------cEEEEECccccc
Confidence 9999999999999999999865 589999987654
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.85 E-value=3.7e-05 Score=76.02 Aligned_cols=74 Identities=23% Similarity=0.266 Sum_probs=56.3
Q ss_pred EEEEEecCCCc--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeecccc
Q psy4039 315 LFILMKKYNTD--LRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGS 391 (588)
Q Consensus 315 l~lvme~~~gs--L~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGl 391 (588)
-.+||||.+.. -.-.|++- .+...++..+..++++.+.-|-. .++||+||..=|||+. + +.+.|+|||.
T Consensus 141 nVLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~-----~~p~iID~~Q 212 (268)
T COG1718 141 NVLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-D-----GEPYIIDVSQ 212 (268)
T ss_pred CeEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-C-----CeEEEEECcc
Confidence 57899999532 22222222 44455788899999999999887 8999999999999999 4 5788999998
Q ss_pred ccccC
Q psy4039 392 SYTNK 396 (588)
Q Consensus 392 a~~~~ 396 (588)
|....
T Consensus 213 aV~~~ 217 (268)
T COG1718 213 AVTID 217 (268)
T ss_pred ccccC
Confidence 86544
No 462
>KOG0576|consensus
Probab=97.79 E-value=5.4e-06 Score=90.59 Aligned_cols=245 Identities=17% Similarity=0.095 Sum_probs=149.3
Q ss_pred eEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCc-eE
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPN-VV 275 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpN-IV 275 (588)
+..-...++|+++.+||.+.. .+....+.+.. .....-++++|.++ +||| .+
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~----------------------~l~~rl~~eLLdK~----n~P~~~v 297 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ----------------------TLSRRLAIELLDKV----NNPNPVV 297 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhheeceeecc----------------------chhhHHHHHHHHHc----cCCCCcc
Confidence 344556789999999998765 23333444411 01123378888888 9999 43
Q ss_pred EEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-C-cHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy4039 276 VMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-T-DLRNYLRERCAQLSMHERVLLFTQLLEGV 353 (588)
Q Consensus 276 ~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL 353 (588)
..++-++. ....++.|++++ + +-..........+...+...+.+.-++++
T Consensus 298 ~~~~d~~~----------------------------E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l 349 (829)
T KOG0576|consen 298 RYLEDYDG----------------------------EDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPL 349 (829)
T ss_pred cccccCCc----------------------------ccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccc
Confidence 33322221 224788899884 3 22221111112355556667778888999
Q ss_pred HHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCC
Q psy4039 354 THLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVN 433 (588)
Q Consensus 354 ~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~ 433 (588)
+|||+.-=+||| ||+..++ ..+.+||+....+.... ......+|+.++|||+..... +
T Consensus 350 ~~l~~~~~~~~d----~~l~s~~------~~~~~~~~v~~~L~~~~------~~~t~~~~~~~~~pev~~~~~------~ 407 (829)
T KOG0576|consen 350 AELHSSYKVHRD----NILGSEE------EVKLLDFAVPPQLTRTM------KPRTAIGTPEPLAPEVIQENT------I 407 (829)
T ss_pred cccccccccCcc----ccccccc------ccccccccCCcccCccc------ccccCCCCCCCCCchhhcccc------c
Confidence 999998789999 8888754 67899999887765532 122567999999999987765 3
Q ss_pred CCcCchhhHHHHHHHHhcCCCCCccccccccccccc--cCCCC--CCccH-HHHHHHHHhhhhCCCCCCCHHHHHH----
Q psy4039 434 YSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNA--LPQLN--TNVPE-VMRRLVAKLLENDPSDRPSAELAAT---- 504 (588)
Q Consensus 434 ~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~--~~~~~--~~~~~-~l~~Li~~~L~~dP~~Rps~~e~l~---- 504 (588)
..+.|+||.|+-..++.-|.+|-............. .+.+. ...++ .-.++...|+..-|..|+....++-
T Consensus 408 ~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvf 487 (829)
T KOG0576|consen 408 DGCPDSGSLAVSAIQMAPGLPPRSSPPAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVF 487 (829)
T ss_pred ccCCCccCCCcchhhcCCCCCCCCCCccccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHh
Confidence 356899999998888888877754421110000000 00000 00011 1124777899999999988766543
Q ss_pred -HHhhhhhcCCcccc
Q psy4039 505 -VCQLYLWAPKHWLY 518 (588)
Q Consensus 505 -~L~~~~~~~h~w~~ 518 (588)
-+..-.-+..+|+-
T Consensus 488 ngCpl~i~~aaswIh 502 (829)
T KOG0576|consen 488 NGCPLRIHCAASWIH 502 (829)
T ss_pred ccCcccceecccccC
Confidence 12222345677775
No 463
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.75 E-value=0.00035 Score=69.31 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=24.9
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
.++|+|+.|.||+++++ + +.|+||+.+..
T Consensus 154 ~~~HgD~~~~Nii~~~~-----~-~~iIDwe~a~~ 182 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGK-----G-TYWIDLGDFGY 182 (226)
T ss_pred ceEecCCCCCcEEEcCC-----C-cEEEechhcCc
Confidence 57899999999999876 5 78999998743
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.74 E-value=0.00041 Score=67.06 Aligned_cols=161 Identities=18% Similarity=0.129 Sum_probs=94.9
Q ss_pred CCeEEeeeecccCc-eeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhh-hh----cccccchhhhHHHHHhhhcCCC
Q psy4039 196 DDIQIGKFIAKGTN-AVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSK-EL----LPLRKPLRLNEDMLMNSVENLP 269 (588)
Q Consensus 196 ~~~~~~~~IG~G~f-G~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~-e~----~~~~~~~~~~Ei~il~~l~~l~ 269 (588)
.+++..+.||.|+- |.||++...|+.||+|+++......... ....+.. +. .......|..|-+...+|...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~- 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDY-TRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA- 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCcc-ccccccccccccchhhhhcChHHHHHHhhHHHHhc-
Confidence 78999999999999 9999999999999999953322221100 0000000 00 011233566676655555322
Q ss_pred CCCce--EEEeeeeeccC-CCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHH
Q psy4039 270 PHPNV--VVMHFAFTDFV-PSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLF 346 (588)
Q Consensus 270 ~HpNI--V~l~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~ 346 (588)
.+.++ |+.+||..-.. ........ ... ........-||.||....- .++. .-+
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~---~~~--------~~~~~~~~aIVKD~v~~~~---------~~~~----~~~ 170 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQ---RGS--------DHRPLPIRAIVKDFVPDDP---------PLQI----RDI 170 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhc---ccc--------cCCCCccEEEEEeecCCcc---------ccch----hHH
Confidence 45566 89999985321 00000000 000 0111223678888874211 2222 334
Q ss_pred HHHHHHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 347 TQLLEGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 347 ~ql~~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
.+|.+-+.-+|..||+-+|+|+.|.. + -||+|||.+
T Consensus 171 ~~~~~dl~~~~k~gI~~~Dv~~~ny~-~---------G~lvDfs~~ 206 (207)
T PF13095_consen 171 PQMLRDLKILHKLGIVPRDVKPRNYR-G---------GKLVDFSSS 206 (207)
T ss_pred HHHHHHHHHHHHCCeeeccCcccccc-C---------CEEEecccC
Confidence 66777788999999999999999975 2 259999964
No 465
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.67 E-value=0.00019 Score=67.39 Aligned_cols=129 Identities=26% Similarity=0.280 Sum_probs=86.4
Q ss_pred eEEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceE-E
Q psy4039 198 IQIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVV-V 276 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV-~ 276 (588)
....+.||+|++|.||+|.+.|.++|+|+=+..+ .+..+..|.++|..+ .-.++- +
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds-------------------~r~~l~kEakiLeil----~g~~~~p~ 80 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS-------------------PRRNLEKEAKILEIL----AGEGVTPE 80 (201)
T ss_pred hhhhhhhhcccccEEEEeeccCceEEEEEecCCc-------------------chhhHHHHHHHHHHh----hhcCCCce
Confidence 3456789999999999999999999999864321 445566788888877 333332 3
Q ss_pred EeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy4039 277 MHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTH 355 (588)
Q Consensus 277 l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~y 355 (588)
+|.+-. -++.|||.+| .|.+.-... + .+-+..+++.---
T Consensus 81 vy~yg~--------------------------------~~i~me~i~G~~L~~~~~~~----~----rk~l~~vlE~a~~ 120 (201)
T COG2112 81 VYFYGE--------------------------------DFIRMEYIDGRPLGKLEIGG----D----RKHLLRVLEKAYK 120 (201)
T ss_pred EEEech--------------------------------hhhhhhhhcCcchhhhhhcc----c----HHHHHHHHHHHHH
Confidence 443322 4556999976 666554311 1 2334455666445
Q ss_pred HHhCCceeccCCC--CcEEEcCCCCCCCCceeeecccccccc
Q psy4039 356 LNMHRTAHRDLKS--DNILLDCSEDNTCPQLVITDFGSSYTN 395 (588)
Q Consensus 356 LH~~~IvHrDLKp--~NILld~~~~~~~~~vkL~DFGla~~~ 395 (588)
|-..||-|..|.- .||++.+ ..+.|+||.-|+.-
T Consensus 121 LD~~GI~H~El~~~~k~vlv~~------~~~~iIDFd~At~k 156 (201)
T COG2112 121 LDRLGIEHGELSRPWKNVLVND------RDVYIIDFDSATFK 156 (201)
T ss_pred HHHhccchhhhcCCceeEEecC------CcEEEEEccchhhc
Confidence 6678999999873 4666654 36789999988743
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.59 E-value=0.00073 Score=65.57 Aligned_cols=150 Identities=20% Similarity=0.167 Sum_probs=94.6
Q ss_pred eeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhc-ccccchhhhHHHHHhhhc--CCCCCCceEEE
Q psy4039 201 GKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELL-PLRKPLRLNEDMLMNSVE--NLPPHPNVVVM 277 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~-~~~~~~~~~Ei~il~~l~--~l~~HpNIV~l 277 (588)
...||+|+.=.||.--. .....||++.... .......+.+.+... ........+|+.....+. +...+..|.++
T Consensus 6 ~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~--~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPD-DPNLCIKVMRPDR--GERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECCC-CCCeEEEEEcccc--ccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 45799999999986322 4568899986543 111111111111111 123445566776555553 22358899999
Q ss_pred eeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecC---CC----cHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 278 HFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKY---NT----DLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 278 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~---~g----sL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
+|+.++.. .+-+|+|.. +| +|.+++... .+++ .. ...+-
T Consensus 83 ~G~veT~~----------------------------G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~---~~~L~ 128 (199)
T PF10707_consen 83 YGFVETNL----------------------------GLGLVVELIRDADGNISPTLEDYLKEG--GLTE-EL---RQALD 128 (199)
T ss_pred eEEEecCC----------------------------ceEEEEEEEECCCCCcCccHHHHHHcC--CccH-HH---HHHHH
Confidence 99988632 256777765 23 789998655 5665 33 33344
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeec
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITD 388 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~D 388 (588)
+-..||-+.+|+.+|++|+||++....+.. ..++|+|
T Consensus 129 ~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~-~~lvlID 165 (199)
T PF10707_consen 129 EFKRYLLDHHIVIRDLNPHNIVVQRRDSGE-FRLVLID 165 (199)
T ss_pred HHHHHHHHcCCeecCCCcccEEEEecCCCc-eEEEEEe
Confidence 456788999999999999999998774433 4677777
No 467
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.58 E-value=0.00068 Score=66.34 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=24.7
Q ss_pred eeeecccCceeEEEEEECCeeEEEEEEe
Q psy4039 201 GKFIAKGTNAVVYEATFRGVEYALKMMF 228 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~g~~vAVK~i~ 228 (588)
.+.|+.|..+.||+....+..+++|...
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~ 29 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYR 29 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeC
Confidence 4678999999999999988899999973
No 468
>KOG1035|consensus
Probab=97.55 E-value=0.00014 Score=84.63 Aligned_cols=202 Identities=19% Similarity=0.141 Sum_probs=128.1
Q ss_pred HHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHHHHHhcCC
Q psy4039 258 EDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNYLRERCAQ 336 (588)
Q Consensus 258 Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~L~~~~~~ 336 (588)
|+..+..+ .|+|++.++.|-.... +++.-+.+..++|. -++...+..-+ .
T Consensus 232 e~~~l~k~----~~~n~~~~~~~~le~~------------------------~~g~~~~v~~~~~s~~~~~~~~q~v~-~ 282 (1351)
T KOG1035|consen 232 ELESLSKI----AHDNLGGYFVYGLERL------------------------FRGIVLDVLQEICSKVELRSLLQSVG-S 282 (1351)
T ss_pred HHHHHHhh----ccccccceeEEeehhh------------------------cchHHHHHHHhhcCccchHHHHhhcc-c
Confidence 34444444 8999999887765422 11112334455664 46777666544 7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCceeccCCCC---cEEEcCCCCCCCCceeee--ccccccccCCCCcccccccccccc
Q psy4039 337 LSMHERVLLFTQLLEGVTHLNMHRTAHRDLKSD---NILLDCSEDNTCPQLVIT--DFGSSYTNKSGLSMQYSSADIELG 411 (588)
Q Consensus 337 l~~~~~~~i~~ql~~gL~yLH~~~IvHrDLKp~---NILld~~~~~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~ 411 (588)
.+....+.+..+..+||.|+|+....|.-+..+ +--.+.+ +...++ ||+..+........ ....
T Consensus 283 i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e-----~~~~~sl~~~~ss~~l~d~~~~------~~~~ 351 (1351)
T KOG1035|consen 283 IPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGE-----GVVAISLSDFDSSKPLPDNEKS------FSDL 351 (1351)
T ss_pred cCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCcc-----ceeecchhhhcccccCCCcccc------hhhc
Confidence 888999999999999999999986655554444 2222222 445555 88877665442111 0112
Q ss_pred CCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccccccccccccccCCCCCCccHHHHHHHHHhhhh
Q psy4039 412 GNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQSARNTDYEVNALPQLNTNVPEVMRRLVAKLLEN 491 (588)
Q Consensus 412 GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~ 491 (588)
-+..+.|||......... ....|+|.+|.....+..|..+-........ -++........+.+.+|+.-
T Consensus 352 ~~~~~~~~e~~~~~~~~~----~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~-------~l~~~~~~~~~d~~~~~~~~ 420 (1351)
T KOG1035|consen 352 LAEIRNADEDLKENTAKK----SRLTDLWCLGLLLLQLSQGEDISEKSAVPVS-------LLDVLSTSELLDALPKCLDE 420 (1351)
T ss_pred Cccccccccccccccchh----hhhhHHHHHHHHHhhhhhcCcccccccchhh-------hhccccchhhhhhhhhhcch
Confidence 344677888876655321 1346999999999999987655222111111 11122222678899999999
Q ss_pred CCCCCCCHHHHHHHHhhhhhcCCccccC
Q psy4039 492 DPSDRPSAELAATVCQLYLWAPKHWLYG 519 (588)
Q Consensus 492 dP~~Rps~~e~l~~L~~~~~~~h~w~~~ 519 (588)
++++|+++.+++. |++++.
T Consensus 421 ~~~~Rl~~~~ll~---------~~f~~~ 439 (1351)
T KOG1035|consen 421 DSEERLSALELLT---------HPFLRF 439 (1351)
T ss_pred hhhhccchhhhhh---------chhccc
Confidence 9999999999998 888873
No 469
>PLN02876 acyl-CoA dehydrogenase
Probab=97.46 E-value=0.0007 Score=79.82 Aligned_cols=64 Identities=13% Similarity=0.055 Sum_probs=41.8
Q ss_pred eeeecccCceeEEEEEECC----eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCce--
Q psy4039 201 GKFIAKGTNAVVYEATFRG----VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNV-- 274 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~g----~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNI-- 274 (588)
...|+.|.+..+|+....+ ..+++|+....... .....+.+|..+|+.+ ..|++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~----------------~~~~~~~rE~~~l~~L---~~~~~vpV 103 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL----------------QSAHAVEREYQVLRAL---GEHTDVPV 103 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC----------------ccHHHHHHHHHHHHHH---hhcCCCCC
Confidence 4678999999999987764 47888875321110 1223466799999887 235554
Q ss_pred EEEeeeeec
Q psy4039 275 VVMHFAFTD 283 (588)
Q Consensus 275 V~l~~~~~~ 283 (588)
.+++.+|.+
T Consensus 104 P~v~~~~~d 112 (822)
T PLN02876 104 PKVYCLCTD 112 (822)
T ss_pred CcEEEEecC
Confidence 566766655
No 470
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.37 E-value=0.0015 Score=65.32 Aligned_cols=30 Identities=23% Similarity=0.144 Sum_probs=25.6
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeecccccc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 393 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~ 393 (588)
..++|+|+.|.|||++.+ ..+.|+||+.|.
T Consensus 163 ~~l~HgD~~~~Nil~~~~-----~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG-----KFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCC-----cEEEEEEccccc
Confidence 358999999999999976 567799999874
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.19 E-value=0.001 Score=64.13 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=74.3
Q ss_pred hHHHHHhhhcCCCCCCceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCC-CcHHHH---HHH
Q psy4039 257 NEDMLMNSVENLPPHPNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYN-TDLRNY---LRE 332 (588)
Q Consensus 257 ~Ei~il~~l~~l~~HpNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~-gsL~~~---L~~ 332 (588)
.|.-+|+.+ ...+++.+++|+|- -+++.||.+ +++... +..
T Consensus 8 ~E~lll~~l---~~~~~~pk~lG~CG--------------------------------~~~v~E~~~~~~~~~~~~~l~~ 52 (188)
T PF12260_consen 8 NEPLLLQLL---QGSEPFPKLLGSCG--------------------------------RFYVVEYVGAGSLYGIYRPLSQ 52 (188)
T ss_pred cHHHHHHHc---CCCCCCCCeeeECC--------------------------------CEEEEEeecCcccccccccccc
Confidence 477777776 23369999998873 356888885 444311 111
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCCCcEEEcCCCCCCCCceeeecccccccc
Q psy4039 333 RCAQLSMHERVLLFTQLLEGVTHLNM---HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 395 (588)
Q Consensus 333 ~~~~l~~~~~~~i~~ql~~gL~yLH~---~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~ 395 (588)
-...+|..+.+|+.++++.+.+|++ ..+.-.|++++|+-++++ +.+|++|...+...
T Consensus 53 -~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~-----~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 53 -FLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD-----GRLKLIDLDDVFVE 112 (188)
T ss_pred -ccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC-----CcEEEEechhcchh
Confidence 0156899999999999999999998 457779999999999987 89999999877543
No 472
>KOG0696|consensus
Probab=97.04 E-value=0.00032 Score=73.11 Aligned_cols=56 Identities=16% Similarity=0.206 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCccccc--ccccccCccccccccc
Q psy4039 59 QNARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFV--GVSLASGTGILTNRVT 118 (588)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~--~~~~~~~~~~~~~~~~ 118 (588)
.-.+.|+.++|.+|||.| |-.|||.|+| .+|=+++|+|||||-+ |.+. .+||..||
T Consensus 579 ~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~----eNFD~~Ft 644 (683)
T KOG0696|consen 579 AICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDA----ENFDKFFT 644 (683)
T ss_pred HHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCccccCCch----hhhhHHHh
Confidence 346789999999999999 8889999999 8999999999999987 3333 35565554
No 473
>KOG1826|consensus
Probab=96.77 E-value=0.0023 Score=76.67 Aligned_cols=175 Identities=10% Similarity=-0.080 Sum_probs=115.9
Q ss_pred eEEEEEecC-CCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-----CceeccCCCCcEEEcCCCCCCCCce
Q psy4039 314 SLFILMKKY-NTDLRNYLRER---CAQLSMHERVLLFTQLLEGVTHLNMH-----RTAHRDLKSDNILLDCSEDNTCPQL 384 (588)
Q Consensus 314 ~l~lvme~~-~gsL~~~L~~~---~~~l~~~~~~~i~~ql~~gL~yLH~~-----~IvHrDLKp~NILld~~~~~~~~~v 384 (588)
..+..++++ .|.+.+.|-+. ...++..-+.....+.+.+..-+|+. -.+|++||+-|.+|+.+ .++
T Consensus 1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtn-----y~v 1379 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTN-----YNV 1379 (2724)
T ss_pred HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecC-----Ccc
Confidence 478889998 68999988753 22455555555555557777777753 46899999999999988 789
Q ss_pred eeeccccccccCCCCccccccccccccCCccccchhHHhcCCCCccCCCCCcCchhhHHHHHHHHhcCCCCCccc---cc
Q psy4039 385 VITDFGSSYTNKSGLSMQYSSADIELGGNVALMAPEVALATPGLFSFVNYSKSDAWTAGTVAYEIFGHDNPFYQS---AR 461 (588)
Q Consensus 385 kL~DFGla~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~ksDVwS~Gvil~ElltG~~Pf~~~---~~ 461 (588)
+++++|+.+...+. ........+++.|++|++...-. ++.++|+|..|+.+|+...|..+|-.- ..
T Consensus 1380 ~~gk~gLdKIknp~-----~sf~Gl~l~sp~~v~qli~N~ik------~t~rsdilr~s~~ly~rs~~n~~fi~flq~~L 1448 (2724)
T KOG1826|consen 1380 KLGKGGLDKIKNPV-----LSFFGLELCSPIYVLQLIKNEIK------FTKRSDILRRSLSLYLRSDGNAYFIFFLQPAL 1448 (2724)
T ss_pred cccccccccccCch-----HhhhhhhhCCHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 99999999843221 11122456888999999987654 345599999999999999998887441 11
Q ss_pred cccccccccCCCCCCccHHHHHHHHHhhhhCCCCCCCHHHHHH
Q psy4039 462 NTDYEVNALPQLNTNVPEVMRRLVAKLLENDPSDRPSAELAAT 504 (588)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~l~~Li~~~L~~dP~~Rps~~e~l~ 504 (588)
...........++.-.|.++..+...+|-..-..||.-...+.
T Consensus 1449 kgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls 1491 (2724)
T KOG1826|consen 1449 KGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQYISLS 1491 (2724)
T ss_pred cCcccccccccccccCCCcccHHHHHHHHHHhhhcchhhhhcc
Confidence 1111111111223333444455555555555667777666554
No 474
>PRK10593 hypothetical protein; Provisional
Probab=96.76 E-value=0.025 Score=58.57 Aligned_cols=65 Identities=9% Similarity=-0.038 Sum_probs=40.8
Q ss_pred EEeeeecccCceeEEEEEECCeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 199 QIGKFIAKGTNAVVYEATFRGVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 199 ~~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.-.+.||.|..+.||+....+..+.||..+... ....+..|...|+.+.... --.+.+++
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~-------------------~~~~~~~Ea~~L~~L~~~~-~vpVP~V~ 76 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGNPMPLMARSFS-------------------TPGVAQQEAWKLSMLARSG-TVRMPTVY 76 (297)
T ss_pred heeeecCCccceeEEEEEcCCCCEEEEEecccc-------------------cchHHHHHHHHHHHHccCC-CCCcCcEE
Confidence 345679999999999988765667888752100 1235667888888873320 12344556
Q ss_pred eeeec
Q psy4039 279 FAFTD 283 (588)
Q Consensus 279 ~~~~~ 283 (588)
+++.+
T Consensus 77 ~~~~~ 81 (297)
T PRK10593 77 GVMTH 81 (297)
T ss_pred EEecc
Confidence 65543
No 475
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.70 E-value=0.015 Score=62.38 Aligned_cols=69 Identities=14% Similarity=0.067 Sum_probs=40.5
Q ss_pred eeeecccCceeEEEEEECC--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 201 GKFIAKGTNAVVYEATFRG--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.+.||.|.+..||++...+ +.|.||.-.++.... .+..+....+...|.+.|+.+... .-.++.+++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~----------g~~wpl~~eR~~~Eae~L~~l~~~-~p~~VPkV~ 99 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVV----------GESWPLTLDRARIEAEALKIQAKY-VPDLVPKVY 99 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccc----------cccccccHHHHHHHHHHHHHHHhh-CCCCCCeEE
Confidence 3579999999999999874 489999853221100 010112233445577777765322 123566666
Q ss_pred ee
Q psy4039 279 FA 280 (588)
Q Consensus 279 ~~ 280 (588)
.+
T Consensus 100 ~~ 101 (401)
T PRK09550 100 HY 101 (401)
T ss_pred EE
Confidence 55
No 476
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.67 E-value=0.017 Score=57.21 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=25.3
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeecccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 393 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~ 393 (588)
+++|+|+.+.|||++.++ ..+.|+||..|.
T Consensus 171 ~l~H~Dl~~~Nil~~~~~----~~~~lIDwe~a~ 200 (235)
T cd05157 171 VFCHNDLLSGNIIYNEEK----NSVKFIDYEYAG 200 (235)
T ss_pred EEEcCCCCcCcEEEeCCC----CCEEEEEcccCC
Confidence 689999999999999721 468899999874
No 477
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=96.65 E-value=0.0093 Score=59.31 Aligned_cols=31 Identities=26% Similarity=0.278 Sum_probs=25.1
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccccc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYT 394 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~ 394 (588)
.+++|+|+.+.|||++.+ ...-|+||+.|..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~-----~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDG-----RLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECC-----CEEEEEeCcccCc
Confidence 358999999999999865 4456999998744
No 478
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.46 E-value=0.02 Score=57.73 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=24.3
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeecccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSY 393 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~ 393 (588)
.++|+|+.|.||+++.+ + +.|+||..|.
T Consensus 147 ~l~H~Dl~~~Nil~~~~-----~-~~lIDwE~a~ 174 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQ-----G-LKLIDWEYAS 174 (256)
T ss_pred eeecCCCCcCcEEEeCC-----C-CEEEeccccC
Confidence 58999999999999876 3 6799999874
No 479
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.40 E-value=0.025 Score=58.68 Aligned_cols=29 Identities=31% Similarity=0.378 Sum_probs=25.5
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
.+++|+|+.+.||+++.+ ....|+||+.+
T Consensus 187 ~~l~HgD~~~~Nvl~~~~-----~~~~vIDfd~~ 215 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGD-----SVKGVIDFYFA 215 (307)
T ss_pred CccCCCCCCcCcEEEECC-----ceEEEeecccc
Confidence 589999999999999876 45679999977
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.36 E-value=0.014 Score=60.01 Aligned_cols=29 Identities=31% Similarity=0.360 Sum_probs=25.2
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
.+++|+|+.|.|||++++ ..+.|.||+.|
T Consensus 175 ~~l~HgD~~~~Nil~~~~-----~~~~iIDfe~a 203 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD-----ELSGVIDFYFA 203 (296)
T ss_pred CcCCccCcCcccEEEeCC-----ceEEEeehhhh
Confidence 479999999999999876 45679999977
No 481
>KOG0695|consensus
Probab=96.32 E-value=0.0025 Score=64.87 Aligned_cols=60 Identities=15% Similarity=0.125 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhhhhcCC---chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccc
Q psy4039 60 NARKLFVNSLLNRVTNS---MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSM 121 (588)
Q Consensus 60 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~ 121 (588)
-|+.+|.++|..|||.- |..|||.|+| +-|-+|.+-|||+|.|. +.-|-..||..||...
T Consensus 489 vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~--~d~~l~~fd~qft~e~ 557 (593)
T KOG0695|consen 489 VLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQIT--DDYGLDNFDTQFTSEP 557 (593)
T ss_pred HHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccc--cccCccccccccccCC
Confidence 37899999999999876 9999999999 67779999999999984 4346667899998654
No 482
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.29 E-value=0.035 Score=58.66 Aligned_cols=67 Identities=15% Similarity=0.086 Sum_probs=39.7
Q ss_pred eecccCceeEEEEEECC--eeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEeee
Q psy4039 203 FIAKGTNAVVYEATFRG--VEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMHFA 280 (588)
Q Consensus 203 ~IG~G~fG~Vy~a~~~g--~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~~~ 280 (588)
.||.|....||++...+ +.|+||.-..+. +. ..+..++...+..-|...|+....+.. ..+.++|.+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~v---------Rv-~g~~wpl~~~R~~~E~~~L~~~~~~~P-~~vP~vy~~ 70 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYV---------RV-VGESWPLTLDRARIESSALIRQGEHVP-HLVPRIFHF 70 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHH---------hh-cCCCCCCCccHHHHHHHHHHHhhccCc-cccCeEEEE
Confidence 58999999999999874 589999853211 11 112223444455567777776533222 144456544
No 483
>KOG0605|consensus
Probab=96.23 E-value=0.0022 Score=69.20 Aligned_cols=49 Identities=20% Similarity=0.333 Sum_probs=40.5
Q ss_pred HHHHHHHhhhhhhcCCchhHHHhHHH------HHHhhhcCCCCcccccccccccCccccc
Q psy4039 61 ARKLFVNSLLNRVTNSMASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILT 114 (588)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~ 114 (588)
..+|+. ||.+|||++|++|||.||| +.|+.. .|||.|-|--.. ||++|+
T Consensus 423 I~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~--~apfvP~v~~~~--DT~yFd 477 (550)
T KOG0605|consen 423 ITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREM--PAPFVPQVNSEL--DTQYFD 477 (550)
T ss_pred HHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcC--CCCCCCCCCCcc--cccccc
Confidence 567888 9999999889999999999 677654 499999996666 666666
No 484
>PRK05231 homoserine kinase; Provisional
Probab=96.22 E-value=0.077 Score=55.20 Aligned_cols=29 Identities=28% Similarity=0.308 Sum_probs=24.6
Q ss_pred CCceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 359 HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 359 ~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
.+++|+|+.|.|||++.+ ...-|+||+.|
T Consensus 187 ~~liHgD~~~~Nil~~~~-----~~~~iIDf~~~ 215 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGD-----RLSGFIDFYFA 215 (319)
T ss_pred cccCCCCCCCCcEEEECC-----ceEEEEecccc
Confidence 489999999999999855 34569999987
No 485
>KOG0610|consensus
Probab=96.19 E-value=0.0019 Score=67.66 Aligned_cols=42 Identities=21% Similarity=0.282 Sum_probs=34.9
Q ss_pred hHHHHHHHHhhhhhhcCC-chhHHHhHHH-----HHHhhhcCCCCcccc
Q psy4039 59 QNARKLFVNSLLNRVTNS-MASDLRRKTI-----QQLLYKDNSKPFLAF 101 (588)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~l~~~~~~~pf~~~ 101 (588)
.-.|+||++||.+|||.- ||+|||+|+| -. +=+...||+-|-
T Consensus 366 DLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa-Lir~~~PP~iP~ 413 (459)
T KOG0610|consen 366 DLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA-LIRCARPPEIPK 413 (459)
T ss_pred HHHHHHhccChhhhhccccchHHhhcCccccCCChh-heeccCCCcCCC
Confidence 347999999999999877 9999999999 23 446788999664
No 486
>KOG2268|consensus
Probab=95.95 E-value=0.0033 Score=64.57 Aligned_cols=153 Identities=18% Similarity=0.212 Sum_probs=92.4
Q ss_pred eEEeeeecccCceeEEEEEEC-CeeEEEEEEecCCCCc-----chHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCC
Q psy4039 198 IQIGKFIAKGTNAVVYEATFR-GVEYALKMMFNYSAAS-----NSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPH 271 (588)
Q Consensus 198 ~~~~~~IG~G~fG~Vy~a~~~-g~~vAVK~i~~~~~~~-----~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~H 271 (588)
+.+++.||-|-=+-||.+.+. |++.++|.-+....+. +..+..+.-...+.-+++-...+|+..|+.+. .|
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~---e~ 170 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALY---ER 170 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHH---Hc
Confidence 567899999999999999997 8999999754332221 11111111111122333334456888888771 12
Q ss_pred CceEEEeeeeeccCCCCCCCCCcCCCCCCCccCCCCCCCCCceEEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy4039 272 PNVVVMHFAFTDFVPSIPDSSLIYPSALPARLNPTGGYGRNMSLFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLL 350 (588)
Q Consensus 272 pNIV~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gg~~~~~~l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~ 350 (588)
--= .|..++ ...-++|||+..| .|.+.-+ ..+ .-.+...+.
T Consensus 171 gfp------------------------VPkpiD-------~~RH~Vvmelv~g~Pl~~v~~----v~d---~~~ly~~lm 212 (465)
T KOG2268|consen 171 GFP------------------------VPKPID-------HNRHCVVMELVDGYPLRQVRH----VED---PPTLYDDLM 212 (465)
T ss_pred CCC------------------------CCCccc-------ccceeeHHHhhcccceeeeee----cCC---hHHHHHHHH
Confidence 110 111111 1125778888754 3332211 112 223444555
Q ss_pred HHHHHHHhCCceeccCCCCcEEEcCCCCCCCCceeeeccccccccC
Q psy4039 351 EGVTHLNMHRTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTNK 396 (588)
Q Consensus 351 ~gL~yLH~~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~~ 396 (588)
.-+.-|-.+|+||+|..-=||+++++ ..++++||--+-...
T Consensus 213 ~~Iv~la~~GlIHgDFNEFNimv~dd-----~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 213 GLIVRLANHGLIHGDFNEFNIMVKDD-----DKIVVIDFPQMVSTS 253 (465)
T ss_pred HHHHHHHHcCceecccchheeEEecC-----CCEEEeechHhhccC
Confidence 55677888999999999999999977 789999998765443
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.77 E-value=0.044 Score=58.63 Aligned_cols=68 Identities=16% Similarity=0.084 Sum_probs=43.1
Q ss_pred eeeecccCceeEEEEEEC--CeeEEEEEEecCCCCcchHHHHHHHhhhhcccccchhhhHHHHHhhhcCCCCCCceEEEe
Q psy4039 201 GKFIAKGTNAVVYEATFR--GVEYALKMMFNYSAASNSHAILKAMSKELLPLRKPLRLNEDMLMNSVENLPPHPNVVVMH 278 (588)
Q Consensus 201 ~~~IG~G~fG~Vy~a~~~--g~~vAVK~i~~~~~~~~~~~~~k~~~~e~~~~~~~~~~~Ei~il~~l~~l~~HpNIV~l~ 278 (588)
.+.||.|.-..||++.+. ++.|+||.-..+. + ..+..++...+..-|.+.|+....+.. ..+.++|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~v---------R--v~~swpL~~~R~~~E~~aL~~~~~~~P-~~VP~vy 101 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTA---------R--ISDEFKLSTNRIRIESDVLQLEEELAP-GLVPKVY 101 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhh---------c--cCCCCCCChHHHHHHHHHHHHHHhhCC-CcCCeEE
Confidence 567899999999999985 6789999853211 1 122234455556668888877643321 2355666
Q ss_pred ee
Q psy4039 279 FA 280 (588)
Q Consensus 279 ~~ 280 (588)
.+
T Consensus 102 ~~ 103 (409)
T PRK12396 102 LF 103 (409)
T ss_pred EE
Confidence 54
No 488
>KOG0616|consensus
Probab=95.32 E-value=0.01 Score=59.92 Aligned_cols=41 Identities=22% Similarity=0.313 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCccc
Q psy4039 60 NARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLA 100 (588)
Q Consensus 60 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~ 100 (588)
-+++|+..|-..|+|+- |.+|||+|+| .+++.|+|+|||.|
T Consensus 271 Ll~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~p 319 (355)
T KOG0616|consen 271 LLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEP 319 (355)
T ss_pred HHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCC
Confidence 47889999999999776 9999999999 89999999999998
No 489
>KOG0986|consensus
Probab=95.25 E-value=0.0092 Score=63.38 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=38.5
Q ss_pred HHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCccccc
Q psy4039 61 ARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFV 102 (588)
Q Consensus 61 ~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~ 102 (588)
.+.||.+||..|||.- |++|+|.||| ++|.+..+.|||.|==
T Consensus 421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp 470 (591)
T KOG0986|consen 421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDP 470 (591)
T ss_pred HHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCc
Confidence 7899999999999865 9999999999 8999999999999844
No 490
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=95.23 E-value=0.13 Score=53.10 Aligned_cols=32 Identities=38% Similarity=0.503 Sum_probs=25.1
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
+++|+|+.+.|||++.+.... ..+.++||..|
T Consensus 180 ~lcH~Dl~~~Nil~~~~~~~~-~~i~lIDwEya 211 (302)
T cd05156 180 VFCHNDLQEGNILLLNPSSET-KKLVLIDFEYA 211 (302)
T ss_pred eEEecCCCcCeEEecCCCCCC-CcEEEEeeCCC
Confidence 689999999999998631001 46889999987
No 491
>KOG1236|consensus
Probab=95.20 E-value=0.069 Score=56.71 Aligned_cols=60 Identities=10% Similarity=0.134 Sum_probs=44.3
Q ss_pred EEEEEecCCC-cHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCceeccCCCCcEEEcCC
Q psy4039 315 LFILMKKYNT-DLRNYLRERCAQLSMHERVLLFTQLLEGVTHLN-MHRTAHRDLKSDNILLDCS 376 (588)
Q Consensus 315 l~lvme~~~g-sL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH-~~~IvHrDLKp~NILld~~ 376 (588)
..++-+|..| ++..+++.. ..+++...+++.-.+.|+.-+- -.+.+|.|+.|.||++...
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~--~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWK--SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ceeeeeccccccHHhhhhcc--cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 4555556644 888898866 5566677777777777766554 4699999999999999654
No 492
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=95.10 E-value=0.016 Score=60.17 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=57.6
Q ss_pred HHhHHHHHHHHhhhhhhcCCc--hhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccccccccccchhh--
Q psy4039 57 YFQNARKLFVNSLLNRVTNSM--ASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTNRVTNSMASDLR-- 126 (588)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 126 (588)
+-.-++++|..||.+|.++.. .+++++|+| .++..+++.||+++..+... +...+++.++.+++.+.+
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 302 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPD--DTFYFDPEFTSRTPKDSPGI 302 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcc--hhhhcCcccccCccccCCCC
Confidence 456689999999999999885 999999997 67888999999999886555 444566666555544332
Q ss_pred --HHhhhhhhcc
Q psy4039 127 --RKTLQQLLYK 136 (588)
Q Consensus 127 --~~~~~~~~~~ 136 (588)
+++.++++.+
T Consensus 303 ~~s~~~~~~~~~ 314 (318)
T cd05582 303 PPSANAHQLFRG 314 (318)
T ss_pred ccccccccccCC
Confidence 4445555555
No 493
>KOG1093|consensus
Probab=94.36 E-value=0.045 Score=59.55 Aligned_cols=70 Identities=19% Similarity=0.134 Sum_probs=45.0
Q ss_pred CcCchhhHHHHHHHHhcCCCCCcccccccccc----ccccC----------CCCCCccHHHHHHHHHhhhhCCCCCCCHH
Q psy4039 435 SKSDAWTAGTVAYEIFGHDNPFYQSARNTDYE----VNALP----------QLNTNVPEVMRRLVAKLLENDPSDRPSAE 500 (588)
Q Consensus 435 ~ksDVwS~Gvil~ElltG~~Pf~~~~~~~~~~----~~~~~----------~~~~~~~~~l~~Li~~~L~~dP~~Rps~~ 500 (588)
+|+||||+|.++.|+.-|..-+.......... ....+ .+-..++.-..++..+|+-..|..||...
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~ 189 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM 189 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence 47999999999999998877664421100000 00000 11123455677888899999999999877
Q ss_pred HHHH
Q psy4039 501 LAAT 504 (588)
Q Consensus 501 e~l~ 504 (588)
++.+
T Consensus 190 ~~~k 193 (725)
T KOG1093|consen 190 ELSK 193 (725)
T ss_pred HHhc
Confidence 7665
No 494
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.21 E-value=0.61 Score=50.27 Aligned_cols=29 Identities=17% Similarity=0.175 Sum_probs=24.7
Q ss_pred EeeeecccCceeEEEEEECCeeEEEEEEe
Q psy4039 200 IGKFIAKGTNAVVYEATFRGVEYALKMMF 228 (588)
Q Consensus 200 ~~~~IG~G~fG~Vy~a~~~g~~vAVK~i~ 228 (588)
..+.||.|....||+....+..|+||.-.
T Consensus 36 ~~~eiggGn~N~VyrV~~~~~svVVKqa~ 64 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSSSGSFVIKQAL 64 (418)
T ss_pred eEEEcCCCceeeEEEEEcCCccEEEEeCC
Confidence 36678999999999998877789999864
No 495
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=94.21 E-value=0.12 Score=54.18 Aligned_cols=75 Identities=24% Similarity=0.303 Sum_probs=58.1
Q ss_pred CceEEEEEecCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCcEEEcCCCCCCCCceeeeccc
Q psy4039 312 NMSLFILMKKYNTDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNMH-RTAHRDLKSDNILLDCSEDNTCPQLVITDFG 390 (588)
Q Consensus 312 ~~~l~lvme~~~gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~~-~IvHrDLKp~NILld~~~~~~~~~vkL~DFG 390 (588)
+.++|++|++.++.|... ..-.++++..++.+.+.-+.-+..+ ..-|||+.-.||||+ + |++.|+||-
T Consensus 298 ~~y~yl~~kdhgt~is~i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~-----GnvtLIDfk 366 (488)
T COG5072 298 TLYLYLHFKDHGTPISII-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-E-----GNVTLIDFK 366 (488)
T ss_pred ceEEEEEEecCCceeeee-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-c-----CceEEEEee
Confidence 346889999887665322 1346788889999888777766654 789999999999999 5 799999999
Q ss_pred cccccCC
Q psy4039 391 SSYTNKS 397 (588)
Q Consensus 391 la~~~~~ 397 (588)
+||....
T Consensus 367 lsRl~~~ 373 (488)
T COG5072 367 LSRLSYS 373 (488)
T ss_pred eeecccC
Confidence 9996433
No 496
>KOG2270|consensus
Probab=94.17 E-value=0.29 Score=51.55 Aligned_cols=75 Identities=23% Similarity=0.224 Sum_probs=57.8
Q ss_pred EEEEEecCC--CcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCcEEEcCCCCCCCCceeeecccc
Q psy4039 315 LFILMKKYN--TDLRNYLRERCAQLSMHERVLLFTQLLEGVTHLNM-HRTAHRDLKSDNILLDCSEDNTCPQLVITDFGS 391 (588)
Q Consensus 315 l~lvme~~~--gsL~~~L~~~~~~l~~~~~~~i~~ql~~gL~yLH~-~~IvHrDLKp~NILld~~~~~~~~~vkL~DFGl 391 (588)
-.|||++++ |--.-.|++- .++...+..+-.|++.-+.-|.. .++||.||.-=|+|+.+ +.+.|+|-+-
T Consensus 239 hVLVM~FlGrdgw~aPkLKd~--~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd------G~lyiIDVSQ 310 (520)
T KOG2270|consen 239 HVLVMEFLGRDGWAAPKLKDA--SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD------GKLYIIDVSQ 310 (520)
T ss_pred ceEeeeeccCCCCcCcccccc--cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC------CEEEEEEccc
Confidence 578999995 3233333333 68888888888899888888865 69999999999999985 5899999987
Q ss_pred ccccCC
Q psy4039 392 SYTNKS 397 (588)
Q Consensus 392 a~~~~~ 397 (588)
+...++
T Consensus 311 SVE~DH 316 (520)
T KOG2270|consen 311 SVEHDH 316 (520)
T ss_pred cccCCC
Confidence 755444
No 497
>KOG0614|consensus
Probab=94.07 E-value=0.047 Score=58.94 Aligned_cols=56 Identities=14% Similarity=0.183 Sum_probs=46.3
Q ss_pred HhHHHHHHHHhhhhhhcCC--chhHHHhHHH------HHHhhhcCCCCcccccccccccCcccccc
Q psy4039 58 FQNARKLFVNSLLNRVTNS--MASDLRRKTI------QQLLYKDNSKPFLAFVGVSLASGTGILTN 115 (588)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~l~~~~~~~pf~~~~~~~~~~~~~~~~~ 115 (588)
.+-.|+|-+.||.-|||+. |+.|||+|.. ..|-.+.+.|||.+-| ++-||+++||+
T Consensus 649 ~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~v--a~ptD~s~Fd~ 712 (732)
T KOG0614|consen 649 TDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSV--ANPTDVSNFDN 712 (732)
T ss_pred HHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccC--CCcccchhccC
Confidence 3446888899999999955 9999999986 8889999999999987 44457777764
No 498
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=93.93 E-value=0.57 Score=49.20 Aligned_cols=29 Identities=38% Similarity=0.492 Sum_probs=24.5
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeeccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSS 392 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla 392 (588)
..+|.|+-+.|||+++++ +.++++||..|
T Consensus 183 v~CHnDl~~~NiL~~~~~----~~l~lID~EYa 211 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDE----GKLYFIDFEYG 211 (330)
T ss_pred EEEECCCCcccEEEeCCC----CcEEEEccccc
Confidence 379999999999997541 57999999987
No 499
>KOG0612|consensus
Probab=93.44 E-value=0.061 Score=63.15 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=40.3
Q ss_pred hHHHHH---HHHhhhhhhcCCchhHHHhHHHH----HHhhhcCCCCcccccccccccCccccc
Q psy4039 59 QNARKL---FVNSLLNRVTNSMASDLRRKTIQ----QLLYKDNSKPFLAFVGVSLASGTGILT 114 (588)
Q Consensus 59 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~pf~~~~~~~~~~~~~~~~ 114 (588)
.+++.| |.-+|..|||-+|++|||+|||. ==-=|+..|||-|-| |+.+||++||
T Consensus 310 eeakdLI~~ll~~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPev--ssd~DTsnFd 370 (1317)
T KOG0612|consen 310 EEAKDLIEALLCDREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPEV--SSDDDTSNFD 370 (1317)
T ss_pred HHHHHHHHHHhcChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCcC--CCCCcccccc
Confidence 344544 44589999999999999999991 111267889999987 6666887774
No 500
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=92.65 E-value=0.77 Score=47.87 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=26.0
Q ss_pred CceeccCCCCcEEEcCCCCCCCCceeeecccccccc
Q psy4039 360 RTAHRDLKSDNILLDCSEDNTCPQLVITDFGSSYTN 395 (588)
Q Consensus 360 ~IvHrDLKp~NILld~~~~~~~~~vkL~DFGla~~~ 395 (588)
.++|+|+.+.||+++.+ .-+=+.||+++..-
T Consensus 199 ~lvHGD~~~gNlii~~~-----~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIIDPG-----RPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEeCC-----CeeEEEeccccccC
Confidence 58999999999999987 33668999988553
Done!