BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4049
(528 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VFL5|SYMM_DROME Methionine--tRNA ligase, mitochondrial OS=Drosophila melanogaster
GN=Aats-met PE=1 SV=2
Length = 582
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/518 (49%), Positives = 331/518 (63%), Gaps = 25/518 (4%)
Query: 1 RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
R+ S+ ++TTPIFYVNA+PHIGHLY+A++ADA R+ +L P L TGTDEHG KIQ
Sbjct: 15 RYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQ 74
Query: 61 NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
AA H + +C+ IS +Y+ +F++ I+ ++RTT + H R V W L R I
Sbjct: 75 QAASLHGVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHI 134
Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
Y Y GWYCVS+E+FL + Q+R DE G S+ES PVEW
Sbjct: 135 YSAAYSGWYCVSDETFLTDSQLRLDEAT------------------GTRYSLESGHPVEW 176
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWG 240
EE NYMF+LS + +DV HW+ K E V+P KF L + SE D+SVSRP RVHW
Sbjct: 177 TEETNYMFRLSQFQDDVRHWV-KTEARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWA 235
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPD--FHT-WPPHIQILGKDILKFHGIYWPAFLI 297
IPVPDDD+QT+YVWLDAL+NYL+ GYPD F WPP Q++GKDILKFHGIYW AFL+
Sbjct: 236 IPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLL 295
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
AAGLEPP VHSHWTVDG KMSKS NVVDP+ +T GLRYFLLREG HSD N
Sbjct: 296 AAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGN 355
Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
YS KA+ ILN+ELA+TLGNLL+R +KS+NP + P + E + V L ++
Sbjct: 356 YSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLADLLRSLDVAKRLQDS 415
Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLG 474
L E + HY +F+ D+ + LH AN F +++KPWTL+ + L ++
Sbjct: 416 LLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIA 475
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWD 512
+T + LR+ GI LQPI+P+LA++LL +L +PT +R W+
Sbjct: 476 MTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWN 513
>sp|Q96GW9|SYMM_HUMAN Methionine--tRNA ligase, mitochondrial OS=Homo sapiens GN=MARS2
PE=1 SV=2
Length = 593
Score = 451 bits (1160), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/527 (44%), Positives = 310/527 (58%), Gaps = 36/527 (6%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSI-LTTGTDEHGLKIQNAAIK 65
+ TTPIFYVNA+PHIGHLY+ALLADA R +L P ++ +TGTDEHGLKIQ AA
Sbjct: 46 YFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRGPSTAATRFSTGTDEHGLKIQQAAAT 105
Query: 66 HKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKY 125
L + C+++S+Q++ +F+ I T ++RTT H V W LK R +Y Y
Sbjct: 106 AGLAPTELCDRVSEQFQQLFQEAGISCTDFIRTTEARHRVAVQHFWGVLKSRGLLYKGVY 165
Query: 126 KGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQN 185
+GWYC S+E FL E ++ +SF VS+ES PV W +E+N
Sbjct: 166 EGWYCASDECFLPEAKVTQQPGPSGDSFP---------------VSLESGHPVSWTKEEN 210
Query: 186 YMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPD 245
Y+F+LS + + WL N + P+ F++ + E D+SVSR + +HWGIPVP
Sbjct: 211 YIFRLSQFRKPLQRWLRGNPQAITPEPFHHVVLQWLDEELPDLSVSRRSSHLHWGIPVPG 270
Query: 246 DDTQTIYVWLDALMNYLTVSGYP--DFHTW-PPHIQILGKDILKFHGIYWPAFLIAAGLE 302
DD+QTIYVWLDAL+NYLTV GYP +F +W P I+GKDILKFH IYWPAFL+ AG+
Sbjct: 271 DDSQTIYVWLDALVNYLTVIGYPNAEFKSWWPATSHIIGKDILKFHAIYWPAFLLGAGMS 330
Query: 303 PPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETK 362
PP+ VHSHWTV G KMSKS+GNVVDP + L+ +T G RYFLLR+G + D +Y + K
Sbjct: 331 PPQRICVHSHWTVCGQKMSKSLGNVVDPRTCLNRYTVDGFRYFLLRQGVPNWDCDYYDEK 390
Query: 363 AKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLT---------- 412
+LN+ELA+ LG LLNRC +K INP P C F EP L
Sbjct: 391 VVKLLNSELADALGGLLNRCTAKRINPSETYPAFCTTC----FPSEPGLVGPSVRAQAED 446
Query: 413 -ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEE--L 469
L+ TL + V HY F YK ++++ + N F+ PW L E+ ++ L
Sbjct: 447 YALVSAVATLPKQVADHYDNFRIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDAPWL 506
Query: 470 NLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRF 516
VL V E LR+ G LQP+ P LADKLL+RLG+ +ER + F
Sbjct: 507 GTVLHVALECLRVFGTLLQPVTPSLADKLLSRLGVSASERSLGELYF 553
>sp|Q499X9|SYMM_MOUSE Methionine--tRNA ligase, mitochondrial OS=Mus musculus GN=Mars2
PE=2 SV=2
Length = 586
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/531 (44%), Positives = 310/531 (58%), Gaps = 36/531 (6%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSI-LTTGTDEHGLKIQN 61
++ + TTPIFYVNA+PHIGHLY+ALLADA R +L P +S +TGTDEHGLKIQ
Sbjct: 35 EARAYFTTPIFYVNAAPHIGHLYSALLADALCRHRRLRVPGSASTRFSTGTDEHGLKIQQ 94
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
AA L I+ C+++S Q+ +F+ DI T ++RTT H V W L+ R +Y
Sbjct: 95 AAATAGLAPIELCDRVSAQFLQLFREADISSTDFIRTTEARHRVAVQHFWGVLEARGLLY 154
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
Y+GWYC S+E FL E ++ Q+ P + VS+ES PV W
Sbjct: 155 KGIYEGWYCASDECFLPEAKV-------------TRQVGPS--GDPCPVSLESGHPVSWT 199
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGI 241
+E+NY+FKLS + + WL N + P+ F+ + E D+SVSR + +HWGI
Sbjct: 200 KEENYIFKLSQFREPLQRWLGNNPQAITPEPFHQAVLQWLEEELPDLSVSRRSSHLHWGI 259
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPD--FHTW-PPHIQILGKDILKFHGIYWPAFLIA 298
PVP DD+QTIYVWLDAL+NYLTV GYPD F +W P I+GKDILKFH IYWPA L+
Sbjct: 260 PVPGDDSQTIYVWLDALVNYLTVVGYPDADFKSWWPATSHIIGKDILKFHAIYWPALLLG 319
Query: 299 AGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNY 358
AGL PP VHSHWTV G KMSKS+GNVVDP + L +T G RYFLLR+G + D +Y
Sbjct: 320 AGLRPPHRIYVHSHWTVSGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPNWDCDY 379
Query: 359 SETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLT------ 412
+ K +L++ELA+ LG LLNRC + INP P C F EP LT
Sbjct: 380 YDEKVVKLLDSELADALGGLLNRCTAYRINPSGTYPSFCAAC----FPSEPGLTGPSVRV 435
Query: 413 -----ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE 467
L+ TL + V +Y++F YK ++++ + N F+ PW L E+ +
Sbjct: 436 QAEDYALVTAVATLPKLVAGYYNDFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPED 495
Query: 468 E--LNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRF 516
L VL V E LR+ G LQP+ P LADKLL+RLG+ T ER + F
Sbjct: 496 APWLGTVLHVALECLRVFGTLLQPVTPNLADKLLSRLGVSTTERGLGELYF 546
>sp|Q90YI3|SYMM_TAKRU Methionine--tRNA ligase, mitochondrial OS=Takifugu rubripes
GN=mars2 PE=3 SV=1
Length = 590
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/516 (43%), Positives = 321/516 (62%), Gaps = 23/516 (4%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
+ITTPIFYVNASPH+GHLY+A++AD HR +L +S TGTDEHGLKIQ AA
Sbjct: 45 YITTPIFYVNASPHLGHLYSAVIADCFHRHKQLQG--FNSRFATGTDEHGLKIQQAAEAA 102
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
E ++FC +S++++ +F + +I T Y+RTT + H R V W+ L + IY Y+
Sbjct: 103 GKEPLEFCTTVSERFRHLFSSCNISNTDYIRTTEQRHHRAVQHFWSVLCSKGLIYKGSYE 162
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWY +ESFL Q+ D + VS+ES VEW++E+NY
Sbjct: 163 GWYSTQDESFLTPSQV---------------TTALDSTGKEIKVSLESGHKVEWMKEENY 207
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
MF+LS + + + WL +N ++P++F++ + E D+SVSR K+R+ WGIPVP+D
Sbjct: 208 MFRLSGFRSQLLDWLRENPRAIQPERFHHSVLQWLQEELPDLSVSRQKSRLQWGIPVPED 267
Query: 247 DTQTIYVWLDALMNYLTVSGYPDFHT--WPPHIQILGKDILKFHGIYWPAFLIAAGLEPP 304
D QTIYVWLDAL+NYLTV GYP+ H W I+GKDILKFH IYWP+FL+ AGL P
Sbjct: 268 DGQTIYVWLDALVNYLTVVGYPNNHERWWNVAHHIIGKDILKFHAIYWPSFLLGAGLPLP 327
Query: 305 KSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAK 364
++ VHSHWTV G KMSKS+GNV+DP + FT+ GLRYFLLR+G +D +Y + K
Sbjct: 328 QTIHVHSHWTVAGKKMSKSLGNVIDPQERSQLFTTDGLRYFLLRQGVPDTDCDYRDDKVV 387
Query: 365 NILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECY--EVMFTKEPVLTELIENCQTLH 422
+LNAELA+ LG LLNRC + ++NP V + + E + ++E+ + L
Sbjct: 388 KLLNAELADALGGLLNRCTATALNPAQVYASFCPDSFPRERGGRADDDDYRMLESVRHLP 447
Query: 423 EDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEE--LNLVLGVTFEVL 480
V+ H+ + + YK ++++ + N F+ PW L +++ ++ L ++ V+ E L
Sbjct: 448 AVVEQHFEDMHVYKALEAVSTCVRQTNGFVQRHAPWKLDRKDSADQRWLGTIIHVSLECL 507
Query: 481 RICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRF 516
RI G LQP+VP++++KLL+RLG+ +ER W N+ F
Sbjct: 508 RIYGTLLQPVVPEISNKLLSRLGVQPHERSWTNLNF 543
>sp|A6H7E1|SYMM_BOVIN Methionine--tRNA ligase, mitochondrial OS=Bos taurus GN=MARS2 PE=2
SV=1
Length = 593
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/530 (43%), Positives = 308/530 (58%), Gaps = 36/530 (6%)
Query: 4 STCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPR-ISSILTTGTDEHGLKIQNA 62
S + TTPIFYVNA+PHIGHLY+ALLADA R +L P ++ +TGTDEHGLKIQ A
Sbjct: 43 SRAYFTTPIFYVNAAPHIGHLYSALLADALCRHHRLRVPSDAATGFSTGTDEHGLKIQQA 102
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A L + C+++S Q++ +F+ DI T ++RTT H V W LK R +Y
Sbjct: 103 AAAAGLAPSELCDRVSAQFQQLFREADISSTDFIRTTEARHRIAVQHFWGMLKSRGLLYK 162
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y+GWYC S+E FL E ++ +P + VS+ES PV W +
Sbjct: 163 GLYEGWYCASDECFLPEAKV---------------TRQPGPSGDLCPVSLESGHPVSWTK 207
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E+NY+F+LS + + WL + + P+ F++ + E D+SVSR + +HWGIP
Sbjct: 208 EENYIFRLSQFREPLQQWLRGDPQAITPEPFHHTVLQWLEEELPDLSVSRRSSHLHWGIP 267
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPD--FHTWPPHI-QILGKDILKFHGIYWPAFLIAA 299
VP DD+QTIYVWLDAL+NYLTV GYPD F +W P+ I+GKDILKFH IYWPA L+ A
Sbjct: 268 VPGDDSQTIYVWLDALVNYLTVVGYPDAEFKSWWPNTSHIIGKDILKFHAIYWPALLLGA 327
Query: 300 GLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYS 359
G+ PP VHSHWTV G KMSKS+GNVVDP + L +T G RYFLLR+G D +Y
Sbjct: 328 GMSPPHRIYVHSHWTVCGQKMSKSLGNVVDPRTCLDRYTVDGFRYFLLRQGVPSWDCDYY 387
Query: 360 ETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLT------- 412
+ K +L++ELA+ LG LLNRC + INP + P C F EP L
Sbjct: 388 DEKVVKLLDSELADALGGLLNRCTANKINPSGIYPAFCATC----FPSEPGLVGPSGRAQ 443
Query: 413 ----ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEE 468
L+ TL + V HY F YK ++++ + N F+ PW L E+ ++
Sbjct: 444 AEDYALVSAVATLPKQVADHYDNFQIYKALEAVSSCVRQTNGFVQRHAPWKLNWESPVDA 503
Query: 469 --LNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRF 516
L VL V E LR+ G LQP+ P LAD+LL+RLG+ + ER + F
Sbjct: 504 PWLGTVLHVALECLRVFGTLLQPVTPSLADRLLSRLGVSSTERSLGELHF 553
>sp|Q7T0Z0|SYMM_XENLA Methionine--tRNA ligase, mitochondrial OS=Xenopus laevis GN=mars2
PE=2 SV=1
Length = 562
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/505 (43%), Positives = 301/505 (59%), Gaps = 25/505 (4%)
Query: 9 TTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKL 68
TTPIFYVNA+PH+GH+Y+ALLAD HR+ + I S L+TGTDEHG+K+Q AA L
Sbjct: 39 TTPIFYVNAAPHLGHVYSALLADVQHRYSAMCG--IESKLSTGTDEHGMKVQQAASALGL 96
Query: 69 ETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGW 128
+ FC+ +S Q++ +F DI YT +VRTT H V+ W L+++ IY Y+GW
Sbjct: 97 DPQTFCSTVSLQFRTIFDALDISYTDFVRTTEPRHIEAVSRFWMTLEEQGYIYKGTYEGW 156
Query: 129 YCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMF 188
YC S+E+FL E Q E + ++IR VS+ES V WV E+NYMF
Sbjct: 157 YCTSDEAFLSEGQ------TAEHTDFEGNKIR---------VSLESGHQVHWVSEENYMF 201
Query: 189 KLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDT 248
+LS+ + +WL + V P F + + E D+SVSR ++R+ WGIPVP D +
Sbjct: 202 RLSSLRPALLNWL--QTEPVHPAPFLKLVHHWLEEELPDLSVSRQRSRLSWGIPVPSDSS 259
Query: 249 QTIYVWLDALMNYLTVSGYPD--FHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKS 306
IYVWLDAL+NYLT +GYP+ W P +LGKDIL+FH IYWPAFLIAAGL PP+
Sbjct: 260 HVIYVWLDALVNYLTAAGYPNPQLAPWGPSTHLLGKDILRFHAIYWPAFLIAAGLPPPQK 319
Query: 307 FLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNI 366
LVHSHWT +G KMSKS+ NVVDP + +T+ GLRY+LLR G D +++ A+ +
Sbjct: 320 LLVHSHWTSEGTKMSKSLKNVVDPSDCIRRYTTDGLRYYLLRHGAPERDCDFTHRTARML 379
Query: 367 LNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVK 426
LN+ELA+ LG LLNRC + +INP P E + V + + +L+ Q L +V
Sbjct: 380 LNSELADALGGLLNRCTAPAINPMQHFPKFQYENFPVASRDQ--VHDLLGALQELPVEVD 437
Query: 427 LHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK--ENKIEELNLVLGVTFEVLRICG 484
+F +K ++ I + +N F + PW L++ E + + V+ +T E LR+
Sbjct: 438 QWIKKFQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYLTLEALRLYA 497
Query: 485 IGLQPIVPKLADKLLTRLGIPTNER 509
L P VP LA +L RLG+P R
Sbjct: 498 TLLHPAVPGLATVVLDRLGVPHKMR 522
>sp|Q54MZ8|SYMM_DICDI Probable methionine--tRNA ligase, mitochondrial OS=Dictyostelium
discoideum GN=mmetS PE=3 SV=1
Length = 575
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/519 (40%), Positives = 302/519 (58%), Gaps = 29/519 (5%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K ITTPIFYVN PHIGHLY+ALL DA R+ + + ++ TGTDEHG K+ A
Sbjct: 42 KKKVLITTPIFYVNGPPHIGHLYSALLGDALGRWNRFIGN--DTLFMTGTDEHGSKVDEA 99
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A K+ L+TID+C+KIS++++ +F DI+Y ++RTT H V +W +L +R IY
Sbjct: 100 AKKNGLKTIDYCDKISNRFRELFDKADIKYDDFIRTTEPRHKEAVTAIWNRLLERGYIYK 159
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEK-NEGQYVSIESNQPVEWV 181
YKGWYC S+ESFL + Q+ I P ++ +S+ES V W+
Sbjct: 160 GVYKGWYCTSDESFLTDDQVTEGMS----------PITPQNPISKKCMISLESGHEVNWI 209
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGI 241
EE+NYMFKLS + + +W ++ + + P N LR M S+ D+S+SRP +R+ WGI
Sbjct: 210 EEENYMFKLSEFSKTIENWFEEVKPIF-PAIHVNLLRYMLSQGIKDLSISRPSSRIPWGI 268
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAF 295
VP+D +QTIYVWLDAL NYLTV+GYP+ W I+GKDI+KFH +YWP+F
Sbjct: 269 EVPNDPSQTIYVWLDALTNYLTVTGYPNVSPNSSQSHWSNATHIIGKDIIKFHSVYWPSF 328
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
LIAA PKS + H+HWTV+ KMSKS GNVVDP + + +RYFLL+ G +D
Sbjct: 329 LIAADYPLPKSIICHAHWTVNREKMSKSRGNVVDPFLAIDNHGLELIRYFLLKGGGLEND 388
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELI 415
++SE + ++LA+T GNL++RC K++NP P + +FT + +LI
Sbjct: 389 GDWSEHELAVRFKSDLADTYGNLISRCTGKALNPSGEWPKSVTDT--SLFTMDD--QKLI 444
Query: 416 ENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTL-----RKENKIEELN 470
EN L + V HY +F G+ I+ L+ N ++ PW L R + + LN
Sbjct: 445 ENSSILVKSVSTHYDRGDFKSGIFEIMTFLYECNLYVQNQAPWKLVPKPNRVGSDLIRLN 504
Query: 471 LVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
++ + E++RI + L PI+P ++ L L IP R
Sbjct: 505 TIIYIAIEMIRITSLLLSPIIPTSSNLTLNYLSIPLENR 543
>sp|O14000|SYMM_SCHPO Probable methionine--tRNA ligase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC27E2.06c PE=3 SV=1
Length = 539
Score = 348 bits (892), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 301/522 (57%), Gaps = 37/522 (7%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K F+TTPIFYVNA+PH+GHLY+ +L DA RF L P +S I +TGTDEHGLK+Q
Sbjct: 18 KKPYFLTTPIFYVNAAPHLGHLYSLVLTDAIARFQNL-KPDVSVISSTGTDEHGLKVQTV 76
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + C++ S ++ + + ++TH++RTT+ H +V W +++ I
Sbjct: 77 AQTEGVSPLQLCDRNSKRFADLAVAANTKFTHFIRTTNPKHQASVQEFWKTIQKAGMISF 136
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+++GWYCVS+E+F E I + + P K E + VS+E+ + V+W
Sbjct: 137 ERHEGWYCVSDETFYPESAI-------------QKVVDPATKQEKR-VSMETGKEVQWSS 182
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E NY F LS + + + +KN + V+P F+ Q+ +D+S+SRPK R+ WGIP
Sbjct: 183 EMNYHFLLSKFQSRLIEHYNKNPNFVQPSIFHTQVLEELKTGISDLSISRPKQRLSWGIP 242
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPDFH-------TWPPHIQILGKDILKFHGIYWPAF 295
VP + QTIYVWLDAL+NY++V GYP + WP ++ ++GKDI++FH IYWPAF
Sbjct: 243 VPGNSQQTIYVWLDALINYISVIGYPWLNEKSSLSAGWPANMHVIGKDIIRFHCIYWPAF 302
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+AAGL P+ LVHSHWT++ VKMSKS+GNVVDP + + +RY+LL+ G SD
Sbjct: 303 LMAAGLPLPEKILVHSHWTMNKVKMSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSD 362
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEV-MFTK-EPVLTE 413
SN+ + + +L +LG LL+R SK + N + ++ ++ FT+ E ++ E
Sbjct: 363 SNFDIEELEKDEEHDLRRSLGVLLSRLQSKKLFISNE---IQKQWHKKDDFTEYEDIVHE 419
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLR--KENKIEELNL 471
LIE + + Y+ ++ + VL K +PW L + KI+ L L
Sbjct: 420 LIELPVVCAQSI----DGGCVYEVINLVQSVLRRVTKLFQLKEPWKLSDDSQEKIDTLML 475
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDN 513
V LRI GI LQPI+P + +LL +LGIP N+R N
Sbjct: 476 VA----HSLRISGILLQPIMPTKSTELLDQLGIPKNQRSLQN 513
>sp|Q68W54|SYM_RICTY Methionine--tRNA ligase OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=metG PE=3 SV=1
Length = 507
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 294/519 (56%), Gaps = 40/519 (7%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
K+T +ITTPI+YVN HIGH YT++ +D RF++ + + TGTDEHG K++
Sbjct: 1 MKNTYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDV--MFLTGTDEHGQKVEK 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
AAI ++ F +K S ++ + +I ++RTT H + V W KL +IY
Sbjct: 59 AAINKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
Y+GWY V +E+F +ES + E ++ P + PVEWV
Sbjct: 119 EGFYEGWYSVRDEAFY------------DESEITEDKLAP------------TGAPVEWV 154
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGI 241
+E +Y F L+ + + + + + N D V+P N++ + D+S+SR +WGI
Sbjct: 155 KEPSYFFNLAKWQDKLLEFYELNPDFVRPISRRNEVISFVKSGLKDLSISR--TTFNWGI 212
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT-----WPPHIQILGKDILKFHGIYWPAFL 296
VP+++ IYVWLDAL+NY++ GYPD + WP ++Q++GKDIL+FH +YWPAFL
Sbjct: 213 KVPNNEKHVIYVWLDALVNYISALGYPDQQSNYSKFWPANLQVVGKDILRFHAVYWPAFL 272
Query: 297 IAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDS 356
+AA + PPKS +VH WT G K+SKS+GN +DP++ + +F +RYFL+RE +D+
Sbjct: 273 MAAEISPPKSIMVHGWWTNAGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADA 332
Query: 357 NYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVN-PLVNRECYEVMFTKEPVLTELI 415
N++ +N+EL+N +GNLL+R +S N ++ PL+ + ++ + P+L +
Sbjct: 333 NFTRNNLITRINSELSNKIGNLLHRIVSFVYNNNDAKVPLIKSGVIDKIY-ELPILKTAM 391
Query: 416 ENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGV 475
+ Q E++ L + K +++II + AN +I PW L+K + + L VL
Sbjct: 392 KFAQ---ENI-LLMDKIEINKILENIINLAEDANIYIANEAPWNLKKTDYDKMLE-VLYT 446
Query: 476 TFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
EVLR I LQP VP A+K+L +LG+ ERL+ ++
Sbjct: 447 LLEVLRYVAIMLQPFVPSSANKMLDQLGVAKEERLFKHL 485
>sp|Q1RJZ5|SYM_RICBR Methionine--tRNA ligase OS=Rickettsia bellii (strain RML369-C)
GN=metG PE=3 SV=1
Length = 509
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/517 (35%), Positives = 290/517 (56%), Gaps = 40/517 (7%)
Query: 4 STCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAA 63
+T +ITTPI+YVN PHIGH YT++ +D RF++L + + TGTDEHG K++ AA
Sbjct: 3 NTYYITTPIYYVNDVPHIGHAYTSVASDVIARFMRLSGHEV--MFLTGTDEHGQKVEKAA 60
Query: 64 IKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPN 123
I ++ F ++ S ++ + I ++RTT E H + V W KL SIY
Sbjct: 61 IDKNIDPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEG 120
Query: 124 KYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEE 183
Y+GWY V +E+F E ++ D ++ P + VEWV+E
Sbjct: 121 FYEGWYAVRDEAFYDESELTAD------------KLAP------------TGAAVEWVKE 156
Query: 184 QNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPV 243
+Y F LS + + + + + N D ++P N++ + D+SVSR +WGI V
Sbjct: 157 PSYFFNLSKWQDKLLEFYEANPDFIRPISRRNEVISFVKSGLKDLSVSR--TTFNWGIKV 214
Query: 244 PDDDTQTIYVWLDALMNYLTVSGYPDFHT-----WPPHIQILGKDILKFHGIYWPAFLIA 298
P+D+ IYVWLDAL NY++ GYPD ++ WP ++Q++GKDIL+FH +YWPAFL+A
Sbjct: 215 PNDNKHVIYVWLDALANYISALGYPDQNSNYGKFWPANLQVVGKDILRFHAVYWPAFLMA 274
Query: 299 AGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNY 358
A + PK+ + H WT +G K+SKS+GN +DP+ + +F +RYFL+RE T +D N+
Sbjct: 275 AEIPLPKTIMAHGWWTNEGQKISKSLGNTIDPIKLIEEFGVDQVRYFLMREITFGADGNF 334
Query: 359 SETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
+ + +N+EL+N +GNLL R S N D P + ++ ++ + P+L I +
Sbjct: 335 ARSNLITRINSELSNKIGNLLQRTTSFVYKNNDGKVPAITQDAINKIY-ELPLLKTAINS 393
Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTF 477
+ + + +E N K +D+II + AN +ID+ PW L+K + E++ VL
Sbjct: 394 AK--QNILLMEKTEIN--KILDNIINLAEEANIYIDSEAPWNLKKTDP-EKMLEVLYALL 448
Query: 478 EVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
E LR + LQ +P A K+L +LG+ T ERL+ ++
Sbjct: 449 ETLRYIAVMLQAFMPSSAGKMLDQLGVNTEERLFKHL 485
>sp|Q9ZCP0|SYM_RICPR Methionine--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E)
GN=metG PE=3 SV=1
Length = 508
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 292/519 (56%), Gaps = 42/519 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+T +ITTPI+YVN HIGH YT++ +D RF++ + + TGTDEHG K++ A
Sbjct: 2 KNTYYITTPIYYVNDVAHIGHAYTSVASDVIARFMRFCGKDV--MFLTGTDEHGQKVEKA 59
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
AI ++ F +K S ++ + +I ++RTT H + V W KL +IY
Sbjct: 60 AINQNIDPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWKKLLDNGAIYE 119
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y+GWY V +E+F E +I D ++ P + PVEWV+
Sbjct: 120 GFYEGWYSVRDEAFYDESEINED------------KLAP------------TGAPVEWVK 155
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E +Y F L+ + + + + + N D V+P N++ + D+S+SR HWGI
Sbjct: 156 EPSYFFNLAKWQDKLLEFYELNPDFVRPISRRNEVISFIKSGLKDLSISR--TTFHWGIK 213
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPDFHT-----WPPHIQILGKDILKFHGIYWPAFLI 297
VP++ IYVWLDAL+NY++ GYPD + WP ++QI+GKDIL+FH +YWPAFL+
Sbjct: 214 VPNNRKHVIYVWLDALVNYISALGYPDKQSNYAKFWPANLQIVGKDILRFHAVYWPAFLM 273
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
AA + PK+ +VH WT +G K+SKS+GN +DP++ + +F +RYFL+RE +D+N
Sbjct: 274 AAEIPLPKAIMVHGWWTNEGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADAN 333
Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNPLVNRECYEVMFTKEPVLTELIE 416
++ +N+EL+N +GNLL+R +S N D PL+ + ++ + P+L I+
Sbjct: 334 FARNNLITRINSELSNKIGNLLHRIVSFVYKNNDAKVPLIKSGVIDKIY-ELPILKTAIK 392
Query: 417 NCQTLHEDVKL-HYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGV 475
Q E++ L +E N K +++II + AN +I PW L+ + + L VL
Sbjct: 393 FAQ---ENILLMDKTEIN--KILENIINLAEDANIYITNEAPWNLKTTDPDKMLE-VLYS 446
Query: 476 TFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
EVLR I LQP VP A+K+L +LG+ ERL+ ++
Sbjct: 447 LLEVLRYIAIMLQPFVPNSANKMLDQLGVSKEERLFKHL 485
>sp|Q4UMX2|SYM_RICFE Methionine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=metG PE=3 SV=1
Length = 512
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 290/521 (55%), Gaps = 46/521 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+T +ITTPI+YVN PHIGH YT++ +D RF++L + TGTDEHG K++ A
Sbjct: 2 KNTYYITTPIYYVNDVPHIGHAYTSVASDVIARFIRLCG--FDVMFLTGTDEHGQKVEKA 59
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
AI ++ F + S+ ++ + +I ++RTT H V W KL +IY
Sbjct: 60 AINKNIDPQKFTDHTSESFRHLMNVMNISNDDFIRTTESRHKEAVAIFWQKLLDNGTIYE 119
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y+GWY V +E+F +ES L + P + PVEWV+
Sbjct: 120 GFYEGWYAVRDEAFF------------DESELTSDGLAP------------TGAPVEWVK 155
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E +Y F LS + + + + + N D ++P N++ + D+SVSR +WGI
Sbjct: 156 EPSYFFNLSKWQDKLLEFYEANPDFIRPISRRNEVISFVKSGLKDLSVSR--TTFNWGIK 213
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPDFHT-----WPPHIQILGKDILKFHGIYWPAFLI 297
VP+++ IYVWLDAL +Y++ GYPD + WP + ++GKDIL+FH +YWPAFL+
Sbjct: 214 VPNNEKHVIYVWLDALASYISALGYPDKQSNYGKFWPADLHVVGKDILRFHAVYWPAFLM 273
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
AA + PK+ + H WT +G K+SKS+GN +DP+ + +F +RYFL+RE T +D N
Sbjct: 274 AAEIPLPKTIMAHGWWTNEGQKISKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGN 333
Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNPLVNRECYEVMFTKEPVL---TE 413
++ + +N+EL+N +GNLL R + N D PL+ + + ++ + P+L ++
Sbjct: 334 FARSNLVTRINSELSNKIGNLLQRTTAFVYKNNDGKVPLLMQGIIDKIY-ELPILKTASK 392
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVL 473
E L E +++ K +++II + AN +ID+ PW L+K + E+++ VL
Sbjct: 393 FAEQNILLMEKTEIN-------KVLENIINLSEEANIYIDSEAPWNLKKTDP-EKMSEVL 444
Query: 474 GVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
EVLR I LQP +P A+K+L +LG+ ERL+ ++
Sbjct: 445 YTLLEVLRYIAIMLQPFIPSSANKMLDQLGVNKEERLFKHL 485
>sp|Q8Z068|SYM_NOSS1 Methionine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=metG PE=3 SV=1
Length = 530
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 274/520 (52%), Gaps = 49/520 (9%)
Query: 1 RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
+ + T +TTP++YVN PHIG YT + ADA RF KL+ + +L TGTDEHG KIQ
Sbjct: 6 KAEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDV--LLITGTDEHGQKIQ 63
Query: 61 NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
+A +FC++I + +++ +I+Y + RTT+ H V+ + ++ + I
Sbjct: 64 RSAESLGKAPQEFCDEIVPSFMSLWRLLNIQYDRFSRTTAVRHKAIVDEFFARVWEAGDI 123
Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
Y + KGWYCVS E F +EE LLE G I N+ VEW
Sbjct: 124 YQGQQKGWYCVSCEEF------------KEERELLE----------GNRCPIHVNKEVEW 161
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWG 240
+EQNY F+LS Y + + + D ++P+ N++ N S+ D S+SR + WG
Sbjct: 162 RDEQNYFFRLSKYQTQLEEFYQSHPDFIQPESRRNEVLNFVSQGLQDFSISR--VNLDWG 219
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPDFHT---------WPPHIQILGKDILKFHGIY 291
PVP+D T+YVW DAL+ Y+T P+ WP ++ ++GKDIL+FH +Y
Sbjct: 220 FPVPNDPKHTLYVWFDALLAYVTALLDPEDEPTLENALGKWWPINLHLIGKDILRFHAVY 279
Query: 292 WPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGT 351
WPA L++AGL P H T DG KM KS+GN VDP+ + + S +RY+ L+E
Sbjct: 280 WPAMLLSAGLPLPDRVFGHGFLTKDGQKMGKSLGNTVDPVGLVQQYGSDAVRYYFLKEIE 339
Query: 352 NHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNREC--YEVMFTKEP 409
D +++E + ++LNA+LAN LGNLLNR L+ +V + C Y + T E
Sbjct: 340 FGKDGDFNEVRFIHVLNADLANDLGNLLNRTLN----------MVKKYCANYALSITNED 389
Query: 410 VLTE--LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE 467
+ E L L VK Y F + ++ ++ +NKFID PW+L K+ + +
Sbjct: 390 IPAENTLKALGVDLGAKVKQAYEVLAFNQACGVVLSLVQASNKFIDDQAPWSLYKQERQQ 449
Query: 468 ELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTN 507
E+ VL E +R+ L P++P ++ + +LG N
Sbjct: 450 EVETVLYTVLESVRLAAYLLSPVIPNISSNIYQQLGFGIN 489
>sp|Q92GS6|SYM_RICCN Methionine--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=metG PE=3 SV=1
Length = 508
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 287/520 (55%), Gaps = 46/520 (8%)
Query: 4 STCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAA 63
+T +ITTPI+YVN PHIGH YT++ +D RF++L + TGTDEHG K++ AA
Sbjct: 3 NTYYITTPIYYVNDIPHIGHAYTSVASDVIARFMRLRG--FDVMFLTGTDEHGQKVEKAA 60
Query: 64 IKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPN 123
I ++ F ++ S+ ++ + I ++RTT H + V W KL +IY
Sbjct: 61 INKNIDPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKKAVAVFWQKLLDNGTIYEG 120
Query: 124 KYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEE 183
Y+GWY V +E+F +ES L + P + PVEWV+E
Sbjct: 121 FYEGWYAVRDEAFF------------DESELTRDGLAP------------TGAPVEWVKE 156
Query: 184 QNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPV 243
+Y F LS + + + + + N D ++P N++ + D+SVSR +WGI V
Sbjct: 157 PSYFFNLSKWQDKLLEFYEANPDFIRPISRRNEVISFVKSGLKDLSVSR--TTFNWGIKV 214
Query: 244 PDDDTQTIYVWLDALMNYLTVSGYPDFHT-----WPPHIQILGKDILKFHGIYWPAFLIA 298
P+++ IYVWLDAL NY++ GY D + WP + ++GKDIL+FH +YWPAFL+A
Sbjct: 215 PNNEKHVIYVWLDALANYISALGYLDEQSNYNKFWPADLHVVGKDILRFHAVYWPAFLMA 274
Query: 299 AGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNY 358
A + PK+ + H WT +G K+SKS+GN +DP+ + +F +RYFL+RE T +D N+
Sbjct: 275 AEVPLPKTIMAHGWWTNEGQKISKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNF 334
Query: 359 SETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNPLVNRECYEVMFTKEPVL---TEL 414
+ + +N+EL+N +GNLL R S N D PL+ + + ++ + P+L ++
Sbjct: 335 ARSNLITRINSELSNKIGNLLQRTTSFVYKNNDAKVPLLTQGVIDKIY-ELPILKTASKF 393
Query: 415 IENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLG 474
+E L + +++ K +++II + AN +ID+ PW L+K + + L VL
Sbjct: 394 VEQNILLMDKTEIN-------KILENIINLAEEANIYIDSEAPWNLKKTDPDKMLE-VLY 445
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
EVLR I L P +P A+K+L +LG+ ERL+ ++
Sbjct: 446 ALLEVLRYIAIMLLPFIPSSANKMLDQLGVNKEERLFKHL 485
>sp|O74634|SYMM_CANAX Methionine--tRNA ligase, mitochondrial OS=Candida albicans GN=MSM1
PE=3 SV=1
Length = 577
Score = 314 bits (805), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 188/551 (34%), Positives = 294/551 (53%), Gaps = 71/551 (12%)
Query: 1 RFKST--CFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLK 58
R+KST +ITTPIFYVNA+PHIGHLY+ L+AD +++ KL NP S + TGTDEHGLK
Sbjct: 13 RYKSTKAFYITTPIFYVNAAPHIGHLYSMLIADTRNKWEKL-NPSKESFMLTGTDEHGLK 71
Query: 59 IQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRD 118
IQ+ A K LE +K+S + + + +D+ Y ++RTT H V W + ++
Sbjct: 72 IQSTAEKLGLEPKVLVDKVSQNFSKLAEQFDVNYDRFIRTTDNDHIELVRYFWNLMMEKG 131
Query: 119 SIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPV 178
IY + + GWY +S+E+F E QI KN + +S E+ V
Sbjct: 132 FIYTDTHSGWYSISDETFFPETQIEEVVKN----------------GKAVKISSETKNEV 175
Query: 179 EWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIEN----DISVSRPK 234
+ EE NY FKLS + + +L +N + +KPK Y + + E+E+ D+S+SRP
Sbjct: 176 VYQEETNYFFKLSMFQEQLIQFLKQNPEFIKPKHRY---QFILKELEDTKLPDLSISRPS 232
Query: 235 ARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYP-------------DFHTWPPHIQILG 281
+R+ W I VP+D TQ IYVW DAL+NYLT + +P + WP ++G
Sbjct: 233 SRLKWSIEVPNDSTQKIYVWFDALLNYLTATKFPHGFEVQDSKFVTPENSIWPA-THVIG 291
Query: 282 KDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCG 341
KDI++FH IYWP FL+AAG+E PK +VHSHW DG KMSKS+GN+VDPM +
Sbjct: 292 KDIIRFHCIYWPIFLMAAGIELPKQVIVHSHWLCDGFKMSKSLGNLVDPMEISEYYGVDP 351
Query: 342 LRYFLLREGTNHSDSNYSE---TKAKNILNAELANTLGNLLNRCLS-----KSINPDNVN 393
+R+FL+ D +SE ++++ + + N + + + S KS N
Sbjct: 352 VRFFLVENSNIDDDCKFSEELLQRSRDAVLGKYCNLISRIGGKNFSIEEAVKSFASGEFN 411
Query: 394 PL--------VNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVL 445
+ +N++ E + + L +L + L+ + +++ F++ + + V+
Sbjct: 412 NIREIIETYTINKDSVEGLLSS---LNKLTTDLNDLYNQMDHYFTNFDYIRAIQCWWSVI 468
Query: 446 HLANKFIDTTKPWTLRK-------ENKIEELNLVLGVTF-----EVLRICGIGLQPIVPK 493
+ AN+ + +PWT K +++E +L F E RI I +QP++P+
Sbjct: 469 NQANQIFQSAEPWTYVKLINSPETPAELKEKYRILNNYFVYLCAETTRISSILIQPVMPQ 528
Query: 494 LADKLLTRLGI 504
L+ K+L RL +
Sbjct: 529 LSKKILDRLNV 539
>sp|Q9CD55|SYM_MYCLE Methionine--tRNA ligase OS=Mycobacterium leprae (strain TN) GN=metG
PE=3 SV=1
Length = 537
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/515 (35%), Positives = 269/515 (52%), Gaps = 40/515 (7%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
+ITT I Y NA+PHIGH Y + DA RF +L + TGTDEHGLK+ AA
Sbjct: 5 YITTAIAYPNAAPHIGHAYEYIATDAIARFKRLDGLDVR--FLTGTDEHGLKVAQAAEAA 62
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ T + S ++ M + I + ++RTT H++ +W ++ IY Y
Sbjct: 63 GVPTAQLARRNSGVFQRMQEALHISFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYS 122
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE-EQN 185
GWY V +E F ++ E+ LL++ IR V++E+ V W E EQ
Sbjct: 123 GWYSVRDERFFVD----------SETKLLDNGIR---------VAVETGTLVTWTEKEQT 163
Query: 186 YMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPD 245
Y F+LS Y++ + D N D + P+ N++ + S D S+SR WG+ VP+
Sbjct: 164 YFFRLSAYVDKLLAHYDANPDFIGPEVRRNEVISFVSGGLEDFSISRTS--FDWGVQVPE 221
Query: 246 DDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFLIAA 299
+YVW+DAL NYLT +G+PD + WP ++ ++GKDI++FH +YWPAFL++A
Sbjct: 222 HPDHVMYVWIDALTNYLTGAGFPDTDSELFGRYWPANLHMIGKDIIRFHAVYWPAFLMSA 281
Query: 300 GLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYS 359
G+E P+ H G KMSKSVGN+VDPM+ + F +RYFLLRE D NYS
Sbjct: 282 GIELPRRIFAHGFLHNHGEKMSKSVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYS 341
Query: 360 ETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQ 419
E +N +LAN GNL R L S+ N+ +V FT T L+
Sbjct: 342 EEAIITRMNTDLANEFGNLAQRSL--SMVAKNLGGVVPEPS---EFTSAD--TALLTTAD 394
Query: 420 TLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLGVT 476
L E V+ ++ +++I L+L ANK+ + +PW LRK E VL T
Sbjct: 395 GLLERVRGNFDGQAMNLALEAIWLMLGEANKYFSSQQPWILRKSESEADQARFRTVLYTT 454
Query: 477 FEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLW 511
EV+RI + +QP++P+ A K+L LG ++R +
Sbjct: 455 CEVVRIAALLVQPVMPESAGKMLDLLGQEEDQRAF 489
>sp|O67298|SYM_AQUAE Methionine--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=metG
PE=1 SV=1
Length = 497
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 268/499 (53%), Gaps = 41/499 (8%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
++TTPI+YVN PH+GH YT + AD R+ +L + + TGTDEHGLKIQ A +
Sbjct: 8 YVTTPIYYVNDVPHLGHAYTTIAADTIARYYRLRDYDV--FFLTGTDEHGLKIQKKAEEL 65
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ + ++ ++++K +++ IEYT ++RTT +H + V V+ + +R IY +Y+
Sbjct: 66 GISPKELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEYE 125
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWYCV E F E ++ D H +K E+++E +Y
Sbjct: 126 GWYCVGCEEFKSEAELAED-----------HTCPIHQKK------------CEYIKEPSY 162
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+LS Y + + +KN + ++P N++ + + D+SV+RP++RV WGIPVP D
Sbjct: 163 FFRLSKYQDKLLELYEKNPEFIQPDYRRNEIISFVKQGLKDLSVTRPRSRVKWGIPVPFD 222
Query: 247 DTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKS 306
TIYVW DAL NY++ WP + ++GKDIL+FH +YWPAFL++ G E PK
Sbjct: 223 PEHTIYVWFDALFNYISALEDKVEIYWPADLHLVGKDILRFHTVYWPAFLMSLGYELPKK 282
Query: 307 FLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNI 366
H WTV+G KMSK++GNVVDP + ++ +RYFLLRE D ++S+ N
Sbjct: 283 VFAHGWWTVEGKKMSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNR 342
Query: 367 LNAELANTLGNLLNRC--LSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHED 424
+N ELAN +GNL +R ++ V+ + E ++ E I+N + E
Sbjct: 343 INGELANEIGNLYSRVVNMAHKFLGGEVSGARDEEYAKIA-------QESIKNYENYMEK 395
Query: 425 VKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICG 484
V NFYK ++ I+ NK++D +PW L KE K EEL VL + L +
Sbjct: 396 V-------NFYKAIEEILKFTSYLNKYVDEKQPWALNKERKKEELQKVLYALVDGLFVLT 448
Query: 485 IGLQPIVPKLADKLLTRLG 503
L PI P + L LG
Sbjct: 449 HLLYPITPNKMKEALQMLG 467
>sp|Q9C2H9|SYMM_NEUCR Probable methionine--tRNA ligase, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=93G11.130 PE=3 SV=1
Length = 622
Score = 313 bits (801), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 287/532 (53%), Gaps = 50/532 (9%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
++TTPIFYVNASPH+GH+Y+ +L D R+ L + +IL TGTDEHG K+Q AAI +
Sbjct: 63 YVTTPIFYVNASPHVGHMYSMVLGDVLKRWQTLKGNQ--AILCTGTDEHGTKVQRAAIAN 120
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
++ FC+ S +++ + I+Y ++RTT + H V W LK++ IY K++
Sbjct: 121 DMDPKQFCDLNSAKFQELAAACRIDYDRFMRTTDQDHVEAVKHFWLLLKEKGLIYEAKHE 180
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWYCVS+E F E Q+ + ++ F E + SIES VEW+EE+NY
Sbjct: 181 GWYCVSDECFYPESQL----EKRQDPFTGEVYV----------ASIESGNKVEWIEEKNY 226
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+++ + + + N D + P+ NQ+ + + D+S+SRP +R+ WGI VPDD
Sbjct: 227 HFRMTALKDQLLEFYKNNPDWIVPQTRMNQVVDWVTNNLEDLSISRPVSRLSWGIRVPDD 286
Query: 247 DTQTIYVWLDALMNYLTVSGYP-------DFHTWPPHIQILGKDILKFHGIYWPAFLIAA 299
++QTIYVW+DAL+NY+T++GYP WP + ++GKDIL+FH IYWPA L+A
Sbjct: 287 ESQTIYVWVDALINYITMAGYPYWPPGREHLGGWPVDVHVIGKDILRFHCIYWPALLLAL 346
Query: 300 GLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYS 359
L PK L H+HWT++ KMSKS+GNVV+P + F +R++++ G +D++YS
Sbjct: 347 DLPLPKRILSHAHWTMEKKKMSKSIGNVVNPFYAMERFGIDTMRFYMIHNGGIANDADYS 406
Query: 360 ETKAKNILNAELANTLGNLLNRC-------LSKSINP--------DNVNPLVNRECYEVM 404
L N +GNL R L +++ + +N C E
Sbjct: 407 NDWLTVEYKKHLQNGVGNLSARVTRPKQWSLRRAVQSYQDGNMLLQSTGEQINDSCVE-H 465
Query: 405 FTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKEN 464
T+ L I+N + N + I+ ++ N FI +PW + K+
Sbjct: 466 ITRLDKLASTIDN----------EMLQLNPSHALQKIMGLIGETNAFISNAEPWVIVKKQ 515
Query: 465 KIEEL-NLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMR 515
E L + ++ E LRI GI LQP +P A +LL LG+ + R + + R
Sbjct: 516 DSEALVDRIILTAGESLRIAGILLQPFMPDKAAQLLDLLGVENHNRTFHHAR 567
>sp|P59078|SYM_BRUSU Methionine--tRNA ligase OS=Brucella suis biovar 1 (strain 1330)
GN=metG PE=3 SV=1
Length = 515
Score = 308 bits (788), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 258/515 (50%), Gaps = 43/515 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
+ +ITT I Y N PHIGH Y + DA RF +L + TGTDEHG+K+ +
Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNG--MDVYFLTGTDEHGIKMLQS 60
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A K + + ++ + ++ M + + Y+RT+ E H++ +W + IY
Sbjct: 61 ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYK 120
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y GWY V +E++ E E ++R D G PVEWVE
Sbjct: 121 GGYAGWYSVRDEAYYGEE---------------ETEVRADGVRYG-----PQGTPVEWVE 160
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E++Y F+LS Y + + + N + P + N++ + D+S+SR WGIP
Sbjct: 161 EESYFFRLSAYQDKLLDLYENNPGFIMPAERRNEIVSFVKSGLKDLSISR--TTFDWGIP 218
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPD-----FHTWPPHIQILGKDILKFHGIYWPAFLI 297
VP D+ +YVW+DAL NY+T GYPD + WP + I+GKDI +FH +YWPAFL+
Sbjct: 219 VPGDEKHVMYVWVDALTNYITALGYPDTTDERWAYWPANAHIIGKDISRFHAVYWPAFLM 278
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
+A L PK H G KMSKSVGNV+DP + + LRYFL+RE D +
Sbjct: 279 SAQLPLPKRVFAHGFLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGS 338
Query: 358 YSETKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTKEPVLTEL 414
YS N NA+LAN LGNL R LS K+ P E + + +
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADA---A 395
Query: 415 IENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLG 474
+E + +D LH + + +I V+ AN++ +PW LRK + + VL
Sbjct: 396 LETARKAMDDQALHLA-------LGAIFAVVAEANRYFAGQEPWALRKTDPA-RMGTVLY 447
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VT EVLR GI +QP +P+ A+KLL L +P ++R
Sbjct: 448 VTAEVLRRVGIMVQPFIPQSAEKLLDILAVPADKR 482
>sp|Q98MV8|SYM_RHILO Methionine--tRNA ligase OS=Rhizobium loti (strain MAFF303099)
GN=metG PE=3 SV=1
Length = 516
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 259/508 (50%), Gaps = 38/508 (7%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
++TTPIFY N PHIGH YT + DA RF +L + TGTDEHGLK+Q A K
Sbjct: 7 YLTTPIFYPNGKPHIGHAYTVIATDALARFQRLDGKDV--FFLTGTDEHGLKMQQTAEKE 64
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ ++ S ++ M + Y+RTT H+ + +W + IY ++Y
Sbjct: 65 GITPQALADRNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLDRYS 124
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWY V +E++ +E E+ L E +R + PVEW EE++Y
Sbjct: 125 GWYSVRQEAYF----------DESETTLGEDGVRREPLG----------SPVEWNEEESY 164
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+LS Y + + + D V P + N++ + D+S+SR + WG+PVP D
Sbjct: 165 FFRLSAYQDKLLALYESQPDFVGPAERRNEVMSFVKSGLKDLSISRTTFK--WGVPVPGD 222
Query: 247 DTQTIYVWLDALMNYLTVSGYPD-----FHTWPPHIQILGKDILKFHGIYWPAFLIAAGL 301
D +YVW+DAL NY+T +GYPD + WP I+GKDI++FH +YWPAFL++AG+
Sbjct: 223 DKHVMYVWVDALTNYITAAGYPDTKSDQWRYWPA-THIIGKDIVRFHAVYWPAFLMSAGI 281
Query: 302 EPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSET 361
E PK H G KMSKSVGNVVDP + + + +RYF LRE D +YS
Sbjct: 282 ELPKRVFAHGFLFNRGEKMSKSVGNVVDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHD 341
Query: 362 KAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTL 421
N NA+LAN LGNL R L S+ N +V + E+ +L + + T
Sbjct: 342 AIVNRTNADLANGLGNLAQRSL--SMIAKNCGGVVPKRG-EMTDADSAILDQAVAALTTA 398
Query: 422 HEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLR 481
+ + + + +I V+ A+++ PW L+K + E + VL T E++R
Sbjct: 399 RKAMAGQ----GIHLALAAIFDVVAEADRYFAGQAPWALKKTDP-ERMETVLWTTAELVR 453
Query: 482 ICGIGLQPIVPKLADKLLTRLGIPTNER 509
+ QP +P A KLL L +P ++R
Sbjct: 454 RVAVLCQPFIPGSAAKLLDLLAVPADKR 481
>sp|Q8YH17|SYM_BRUME Methionine--tRNA ligase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=metG PE=3 SV=2
Length = 515
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 257/515 (49%), Gaps = 43/515 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
+ +ITT I Y N PHIGH Y + DA RF +L + TGTDEHG+K+ +
Sbjct: 3 REKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNG--MDVYFLTGTDEHGIKMLQS 60
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A K + + ++ + ++ M + + Y+RT+ E H++ +W + IY
Sbjct: 61 ARKEGITPRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYK 120
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y GWY V +E++ E E ++R D G PVEWVE
Sbjct: 121 GGYAGWYSVRDEAYYGEE---------------ETEVRADGVRYG-----PQGTPVEWVE 160
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E++Y F+LS Y + + + N + P + N++ + D+S+SR WGIP
Sbjct: 161 EESYFFRLSAYQDKLLDLYENNPGFIMPAERRNEIVSFVKSGLKDLSISR--TTFDWGIP 218
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPD-----FHTWPPHIQILGKDILKFHGIYWPAFLI 297
VP D+ +YVW+DAL NY+T GYPD + WP + I+GKDI +FH +YWPAFL+
Sbjct: 219 VPGDEKHVMYVWVDALTNYITALGYPDTTDERWAYWPANAHIIGKDISRFHAVYWPAFLM 278
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
+A L PK H G KMSKSVGNV+DP + + LRYFL+RE D +
Sbjct: 279 SAQLPLPKRVFAHGFLFNRGEKMSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGS 338
Query: 358 YSETKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTKEPVLTEL 414
YS N NA+LAN LGNL R LS K+ P E + + +
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADA---A 395
Query: 415 IENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLG 474
+E + +D LH + + +I V+ AN++ +PW LRK + + VL
Sbjct: 396 LETARKAMDDQALHLA-------LGAIFAVVAEANRYFAGQEPWALRKTDPA-RMGTVLY 447
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VT EVLR GI +QP +P+ A+KLL L P ++R
Sbjct: 448 VTAEVLRRVGIMVQPFIPQSAEKLLDILAAPADKR 482
>sp|Q8UFA2|SYM_AGRT5 Methionine--tRNA ligase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=metG PE=3 SV=1
Length = 516
Score = 305 bits (781), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 263/519 (50%), Gaps = 50/519 (9%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+ +ITT I Y N PHIGH Y + DA RF +L + TGTDEHG K+Q
Sbjct: 4 KTPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDG--MDVFFLTGTDEHGQKMQQT 61
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + + SDQ++ M K + ++RTT E H T +W + IY
Sbjct: 62 ARAEGISPEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYK 121
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+ Y GWY V +E++ E E ++R D G PVEWVE
Sbjct: 122 DSYAGWYSVRDEAYYAED---------------ETEVRADGVRYGP-----QGTPVEWVE 161
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E++Y FKLS Y + ++N D + P + N++ + D+S+SR WGI
Sbjct: 162 EESYFFKLSEYQEKLLKLYEENPDFIGPAERRNEIISFVKSGLKDLSISR--TTFDWGIK 219
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGY------PDFHTWPPHIQILGKDILKFHGIYWPAFL 296
VPDD +YVW+DAL NY+T +GY P WP + I+GKDI++FH +YWPAFL
Sbjct: 220 VPDDPKHVMYVWVDALTNYITATGYIEDRNGPRAKYWPADVHIIGKDIIRFHAVYWPAFL 279
Query: 297 IAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDS 356
++A L PK H G KMSKS+GNVVDP + ++ F +RYF +RE + D
Sbjct: 280 MSAKLPLPKRVYAHGFLLNKGEKMSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDG 339
Query: 357 NYSETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNP---LVNRECYEVMFTKEPVLT 412
+YSE +NA+LAN +GNL +R LS + N D P N + ++ + + +L
Sbjct: 340 SYSEEGIATRINADLANGIGNLASRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLA 399
Query: 413 ELIENC--QTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELN 470
E Q +H + + +II V+ +++ + +PW L+K + E +
Sbjct: 400 VCREEMGKQLIH-------------RALAAIIAVVSETDRYFASQEPWALKKTDP-ERMG 445
Query: 471 LVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VL VT EV+R GI LQP +P+ +KLL + P + R
Sbjct: 446 TVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAAPADGR 484
>sp|Q92PX0|SYM_RHIME Methionine--tRNA ligase OS=Rhizobium meliloti (strain 1021) GN=metG
PE=3 SV=1
Length = 516
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 265/516 (51%), Gaps = 40/516 (7%)
Query: 1 RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
R S +ITT I Y N PHIGH Y + DA RF +L + TGTDEHG K+Q
Sbjct: 2 RDTSPFYITTAISYPNGKPHIGHAYELIATDAMARFQRLDGREV--FFLTGTDEHGQKMQ 59
Query: 61 NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
A K + + + S +++ M + + ++RTT + H +W ++ + +
Sbjct: 60 QTAKKEGISPQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDL 119
Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
Y + Y GWY V +E++ E+ E ++R D G PVEW
Sbjct: 120 YKDSYAGWYSVRDEAYYQEN---------------ETELRGDGVRYG-----PQGTPVEW 159
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWG 240
VEE++Y F+LS Y + + ++N D + P + N++ + D+SVSR WG
Sbjct: 160 VEEESYFFRLSAYQDKLLKHYEENPDFIGPAERRNEVISFVKSGLKDLSVSR--TTFDWG 217
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSG------YPDFHTWPPHIQILGKDILKFHGIYWPA 294
I VP+D + +YVW+DAL NY+T +G P WP +I ++GKDI++FH +YWPA
Sbjct: 218 IKVPNDPSHVMYVWVDALTNYVTATGCLTDPTGPRAKFWPANIHVIGKDIIRFHAVYWPA 277
Query: 295 FLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHS 354
FL++AGL PK H G KMSKS+GNVVDP + + F +RYF LRE +
Sbjct: 278 FLMSAGLPLPKRVFAHGFLLNKGEKMSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQ 337
Query: 355 DSNYSETKAKNILNAELANTLGNLLNRCLSKSI-NPDNVNPLVNRECYEVMFTKEPVLTE 413
D +YSE +N++LAN +GNL +R LS + N D PL C + + +L
Sbjct: 338 DGSYSEEGIATRINSDLANGIGNLASRSLSMIVKNCDGQVPL----CGPLTDEDKAMLAA 393
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVL 473
T E++ ++ + +II V+ +++ +PW L+K + + VL
Sbjct: 394 ADSLIGTAREEMGKQL----IHRALAAIIAVVSETDRYFAGQEPWALKKTDP-SRMATVL 448
Query: 474 GVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VT EV+R I LQP +P+ A KLL + +PT+ R
Sbjct: 449 YVTAEVVRQVAILLQPFMPESAGKLLDLVAVPTDRR 484
>sp|Q8RDD1|SYM_THETN Methionine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=metG PE=3
SV=1
Length = 638
Score = 301 bits (771), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 274/524 (52%), Gaps = 44/524 (8%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
K T +ITTPI+Y + HIGH YT + ADA RF +L + + TGTDEHG KIQ
Sbjct: 1 MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDV--MFLTGTDEHGQKIQR 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
A + + ++ + I + K ++KT DI Y H++RTT +H V ++ KL ++ IY
Sbjct: 59 IAREKGMSPKEYVDGIVEWIKDLWKTMDISYDHFIRTTDAYHEEIVQKIFMKLYEQGDIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
+Y+GWYC ESF E Q+ D K PD +PVE V
Sbjct: 119 KGEYEGWYCTPCESFWTESQL-VDGKC------------PD-----------CGRPVERV 154
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGI 241
E+ Y F+LS Y + + + +++ D ++P+ N++ N D+ VSR + WGI
Sbjct: 155 TEEGYFFRLSAYGDKLLKYYEEHPDFIQPESRRNEMINFIKAGLEDLFVSR--STFDWGI 212
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGY-----PDFHT-WPPHIQILGKDILKFHGIYWPAF 295
VP D IYVW+DAL NY+T GY F WP + ++GK+I++FH I WPA
Sbjct: 213 KVPFDPKHVIYVWIDALSNYITALGYMTENDEKFKKYWPADVHLVGKEIVRFHTIIWPAM 272
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A GL PK H ++G KMSKS GNVVDP + + +RYFLLRE +D
Sbjct: 273 LMALGLPLPKKVFGHGWLILEGGKMSKSKGNVVDPKELVDRYGVDAIRYFLLREVPFGAD 332
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSK-SINPDNVNPLVNRECYEVMFTKEPVLTEL 414
+S N +N++LAN LGNLL+R ++ D V P + ++E + +L
Sbjct: 333 GVFSNEALINRINSDLANDLGNLLSRTVTMIEKYFDGVLPKPS--------SQEEIDEDL 384
Query: 415 IENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLVL 473
I Q L + V+ + + F + I ++ ANK+ID T PW L K E+K L VL
Sbjct: 385 INVAQNLPQKVEEYMDKLQFSNALIEIWKLVSRANKYIDETMPWVLAKDESKRGRLGTVL 444
Query: 474 GVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFS 517
E LR GI + P +P K+ +LGI + W++++F
Sbjct: 445 YNLAESLRFIGILISPFMPNTPKKMFEQLGITEDLTTWESLKFG 488
>sp|P22438|SYMM_YEAST Methionine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSM1 PE=1 SV=2
Length = 575
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 289/568 (50%), Gaps = 69/568 (12%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
+ +TTPIFY NA PH+GHLY++LL+D HR+ +L +S TTGTDEHGLKIQ
Sbjct: 11 YSKVSHVTTPIFYPNAKPHLGHLYSSLLSDVYHRW-QLFKGNLS-FFTTGTDEHGLKIQC 68
Query: 62 AAIKHKLET-IDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
A+ + + F +K+ ++ + K Y I YT ++RTT H V +W + I
Sbjct: 69 ASESNGFDQPKKFVDKLYPEFVQLDKIYGINYTRFIRTTDPDHIENVMKLWELCLKNGYI 128
Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
Y ++KGWY +S +E+F E ++ D KN+G+Y++ ES V +
Sbjct: 129 YMGEHKGWYSIS-----------------DETFYPESKVIKDPKNDGKYLNTESKNEVVY 171
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIEN-----DISVSRPKA 235
E NY F+LS + + + KN D + P +Q+ E+E D+S+SRP A
Sbjct: 172 QSETNYFFRLSLFNKKIVDHIRKNPDFIFPASKRDQI---LKELETGGTLPDLSISRPSA 228
Query: 236 RVHWGIPVPDDDTQTIYVWLDALMNYL-TVSGYPDFHT---------------------- 272
R+ WGIP P+D +Q +YVW DAL NYL ++ G P +
Sbjct: 229 RLKWGIPTPNDPSQKVYVWFDALCNYLSSIGGIPSILSNATEVVSRHYSDKSNVKGQLLI 288
Query: 273 -WPPHIQ-----ILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGN 326
+P +Q ++GKDI KFH +YWP+FL+AAGL P+ +VH HW +G+KMSKS+GN
Sbjct: 289 PYPKEVQRNTIHVIGKDIAKFHTVYWPSFLLAAGLPLPRQIVVHGHWLCNGMKMSKSLGN 348
Query: 327 VVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKS 386
VVDP+ + + +R+FLL D ++ E K L + GNL+NRC
Sbjct: 349 VVDPIDMARYYGADIVRWFLLENSKLEEDGDFQEAKLYETREL-LVSKWGNLINRCCGSK 407
Query: 387 INPDNVNPLVNREC---YEVMFTKEPVLTELIENCQTLHEDVKLHYSE----FNFYKGVD 439
N + + + ++ +F EP+++E IEN L + + E F + + +
Sbjct: 408 FNIERAVMKFSDKANFQFQEIFQNEPIVSERIENLAKLLNKSQEVFDEKIAIFQYPQLLR 467
Query: 440 SIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLL 499
+ +++ AN + +KPW E ++++ + ++ + E RI I Q I+P L+ L
Sbjct: 468 HVWSIINDANTLVQNSKPW----ERELDQQDNIIFLAMETSRILSILCQSIIPSLSQSFL 523
Query: 500 TRLGIPTNERLWDNMRFSDNDMFNDLIN 527
R+ + +R + R + + N
Sbjct: 524 DRIDVSKEKRTINYARLGSDKTYGKQSN 551
>sp|O05593|SYM_MYCTU Methionine--tRNA ligase OS=Mycobacterium tuberculosis GN=metG PE=1
SV=1
Length = 519
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/515 (34%), Positives = 263/515 (51%), Gaps = 46/515 (8%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
++TT I Y NA+PH+GH Y + DA RF +L R TGTDEHGLK+ AA
Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRL--DRYDVRFLTGTDEHGLKVAQAAAAA 62
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ T + SD ++ M + +I + ++RTT H +W ++ IY + Y
Sbjct: 63 GVPTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYS 122
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWY V +E F +E + + +G +++E+ PV W EEQ Y
Sbjct: 123 GWYSVRDERFFVESET--------------------QLVDGTRLTVETGTPVTWTEEQTY 162
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+LS Y + + N D + P+ N++ + S +D+S+SR WG+ VP+
Sbjct: 163 FFRLSAYTDKLLAHYHANPDFIAPETRRNEVISFVSGGLDDLSISR--TSFDWGVQVPEH 220
Query: 247 DTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFLIAAG 300
+YVW+DAL NYLT +G+PD + WP + ++GKDI++FH +YWPAFL++AG
Sbjct: 221 PDHVMYVWVDALTNYLTGAGFPDTDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAG 280
Query: 301 LEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSE 360
+E P+ H G KMSKSVGN+VDP++ +RYFLLRE D +YS+
Sbjct: 281 IELPRRIFAHGFLHNRGEKMSKSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSD 340
Query: 361 TKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
+N +LAN LGNL R LS K+++ NP E + L+E
Sbjct: 341 EAIVTRINTDLANELGNLAQRSLSMVAKNLDGRVPNP---GEFADADAALLATADGLLER 397
Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLG 474
V+ H+ + +++I L+L ANK+ +PW LRK E L
Sbjct: 398 -------VRGHFDAQAMHLALEAIWLMLGDANKYFSVQQPWVLRKSESEADQARFRTTLY 450
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VT EV+RI + +QP++P+ A K+L LG N+R
Sbjct: 451 VTCEVVRIAALLIQPVMPESAGKILDLLGQAPNQR 485
>sp|P59952|SYM_MYCBO Methionine--tRNA ligase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=metG PE=3 SV=1
Length = 519
Score = 298 bits (764), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 264/515 (51%), Gaps = 46/515 (8%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
++TT I Y NA+PH+GH Y + DA RF +L + + TGTDEHGLK+ AA
Sbjct: 5 YVTTAIAYPNAAPHVGHAYEYIATDAIARFKRLDGYDVRFL--TGTDEHGLKVAQAAAAA 62
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ T + SD ++ M + +I + ++RTT H +W ++ IY + Y
Sbjct: 63 GVPTAALARRNSDVFQRMQEALNISFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYS 122
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWY V +E F +E + + +G +++E+ PV W EEQ Y
Sbjct: 123 GWYSVRDERFFVESET--------------------QLVDGTRLTVETGTPVTWTEEQTY 162
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+LS Y + + N D + P+ N++ + S +D+S+SR WG+ VP+
Sbjct: 163 FFRLSAYTDKLLAHYHANPDFIAPETRRNEVISFVSGGLDDLSISR--TSFDWGVQVPEH 220
Query: 247 DTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFLIAAG 300
+YVW+DAL NYLT +G+PD + WP + ++GKDI++FH +YWPAFL++AG
Sbjct: 221 PDHVMYVWVDALTNYLTGAGFPDTDSELFRRYWPADLHMIGKDIIRFHAVYWPAFLMSAG 280
Query: 301 LEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSE 360
+E P+ H G KMSKSVGN+VDP++ +RYFLLRE D +YS+
Sbjct: 281 IELPRRIFAHGFLHNRGEKMSKSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSD 340
Query: 361 TKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
+N +LAN LGNL R LS K+++ NP E + L+E
Sbjct: 341 EAIVTRINTDLANELGNLAQRSLSMVAKNLDGRVPNP---GEFADADAALLATADGLLER 397
Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLG 474
V+ H+ + +++I L+L ANK+ +PW LRK E L
Sbjct: 398 -------VRGHFDAQAMHLALEAIWLMLGDANKYFSVQQPWVLRKSESEADQARFRTTLY 450
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
VT EV+RI + +QP++P+ A K+L LG N+R
Sbjct: 451 VTCEVVRIAALLIQPVMPESAGKILDLLGQAPNQR 485
>sp|Q899D9|SYM_CLOTE Methionine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=metG PE=3 SV=1
Length = 641
Score = 295 bits (756), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 280/528 (53%), Gaps = 51/528 (9%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K T +ITTPI+Y +A HIG+ YT + ADA RF +L + + TGTDEHG KIQ
Sbjct: 3 KKTFYITTPIYYPSAKLHIGNTYTTVAADALARFKRLTGHDV--LFLTGTDEHGQKIQRV 60
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + L+ ++ + + D K ++K+ +I Y ++RTT ++H +V ++ KL ++ IY
Sbjct: 61 AEEKGLKPKEYLDNMVDSIKELWKSMNISYDKFIRTTDDYHIESVQKIFKKLYEQGDIYK 120
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+GWYC ESF E Q+ D+ N PD +PVE +
Sbjct: 121 GEYEGWYCTPCESFWTESQL--DDHN-----------CPD-----------CGRPVEKTK 156
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQ-LRNMCSEIENDISVSRPKARVHWGI 241
E+ Y FK+S Y + + ++++N ++P+ N+ L N D+ +SR WGI
Sbjct: 157 EEAYFFKMSKYADRLIKYIEENPHFIQPESRKNEMLNNFLKPGLQDLCISR--TSFDWGI 214
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAF 295
PV D+ IYVW+DAL NY+T GY + WP ++ ++GKDIL+FH IYWP
Sbjct: 215 PVSFDNKHVIYVWIDALSNYITALGYNSDNQELLEKFWPANVHLVGKDILRFHTIYWPIM 274
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A G+E PK H VDG KMSKS GNVVDP+ + F +RY+LLRE SD
Sbjct: 275 LMALGIELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVDHFGEDTVRYYLLREIPFGSD 334
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVM---FTKEPVLT 412
++ +N++LAN LGNLL+R ++ +V + +M KEP+
Sbjct: 335 GLFNNELFIKKINSDLANDLGNLLSRTVA----------MVQKYFNGIMPAPIAKEPIDD 384
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
ELI E V+ + + + +D I ++ ANK+ID T PW L K E+K + L
Sbjct: 385 ELINLALDTREKVENNMEKLKIPEVLDEIWTLIGRANKYIDETTPWILAKDEDKKDRLGT 444
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDN 519
VL E LRI + + +PK ++++ +L + WD++ D
Sbjct: 445 VLYNLSETLRIISVLISAFIPKTSERINEQLNVDLTT--WDSIASFDG 490
>sp|Q55729|SYM_SYNY3 Methionine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=metG PE=3 SV=1
Length = 532
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 260/509 (51%), Gaps = 41/509 (8%)
Query: 5 TCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAI 64
T +TTP++YVN PH+G YT ++AD RF +L + ++ TGTDEHG KIQ A
Sbjct: 8 TFSVTTPLYYVNDVPHLGSAYTTVVADTLARFKRLQGYDV--LMITGTDEHGQKIQRTAE 65
Query: 65 KHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNK 124
+L+ C++ ++K ++++ +I Y + RTT H V + ++ + IY +
Sbjct: 66 AQELDPQTHCDRTVVKFKELWRSLNILYDRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQ 125
Query: 125 YKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQ 184
+GWYCV+ E F +E+ LLE P + N+ EW +E+
Sbjct: 126 QQGWYCVACEEF------------KEKRDLLEDNHCP----------LHPNRKAEWRDEE 163
Query: 185 NYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVP 244
NY F+LS Y + + + + ++P N++ N ++ D S+SR + WG P+P
Sbjct: 164 NYFFRLSRYQHPLEELYAQRPEFIQPSSRRNEVLNFVAQGLQDFSISR--VNLDWGFPLP 221
Query: 245 DDDTQTIYVWLDALMNYLTVSGYPD---------FHTWPPHIQILGKDILKFHGIYWPAF 295
+D TIYVW DAL+ Y+T D WP ++ ++GKDIL+FH +YWPA
Sbjct: 222 NDPNHTIYVWFDALLGYVTALLDEDEEPNLTNALVKWWPINLHLIGKDILRFHAVYWPAM 281
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L++A L P H T DG KM KS+GN VDP+ ++ + RY+ L+E D
Sbjct: 282 LMSAELAIPAQVFGHGFLTKDGQKMGKSLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKD 341
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELI 415
+++E + N+LNA+LAN LGNLLNR L V + +VM T L
Sbjct: 342 GDFNEQRFVNVLNADLANDLGNLLNRTLGM------VKKYCQGQGPQVMATDLAPDNPLK 395
Query: 416 ENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGV 475
L E+V Y +F ++I ++ NK+ID PW L K+ +E+ VL
Sbjct: 396 ALGSHLGEEVSSAYERLSFTDACEAIFTLVRAGNKYIDDMAPWKLFKQGSQKEVEDVLYS 455
Query: 476 TFEVLRICGIGLQPIVPKLADKLLTRLGI 504
E +R+ L PIVP+L+ K+ +LG
Sbjct: 456 VLESIRLSAYLLSPIVPRLSTKIYQQLGF 484
>sp|P59081|SYM_THEEB Methionine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=metG PE=3 SV=1
Length = 529
Score = 291 bits (746), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 171/506 (33%), Positives = 260/506 (51%), Gaps = 43/506 (8%)
Query: 8 ITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHK 67
+TTP++YVNA PHIG YT + AD RF +L ++ I TGTDEHG KI+ A +
Sbjct: 7 LTTPLYYVNALPHIGSAYTTIAADVLARFYRLQGYQVRFI--TGTDEHGQKIERTAQQRG 64
Query: 68 LETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKG 127
L C++I+ ++ +++ +I Y + RTTS H VN + ++ IY + +G
Sbjct: 65 LSPQAHCDEIAAGFQALWQQLNIHYDRFSRTTSPRHHAIVNEFFQRVWDNGDIYLGQQQG 124
Query: 128 WYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYM 187
WYCV E F E ++ EG+ I N+ VEW +E+NY
Sbjct: 125 WYCVECEEFKEERELL----------------------EGRRCPIHVNRTVEWRDERNYF 162
Query: 188 FKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDD 247
F+LS Y + ++ D V+P N++ + D S+SR + WG PVP D
Sbjct: 163 FRLSKYQQALLDHYAEHPDFVQPPSRRNEVLSFIERGLQDFSISR--VNLAWGFPVPTDP 220
Query: 248 TQTIYVWLDALMNYLTVSGYPDFHT---------WPPHIQILGKDILKFHGIYWPAFLIA 298
QT+YVW DAL+ Y+T P+ WP ++ I+GKDIL+FHGI WPA L++
Sbjct: 221 EQTLYVWFDALLGYVTALLEPEDEPTLANALKTWWPINLHIIGKDILRFHGISWPAMLMS 280
Query: 299 AGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNY 358
AGL P+ VH T DG KM KS+GN +DP + ++ + + +RY+ ++E D ++
Sbjct: 281 AGLPLPEQIFVHGFLTKDGQKMGKSLGNTLDPFALVAQYGADAVRYYFMKEVEFGRDGDF 340
Query: 359 SETKAKNILNAELANTLGNLLNRCLSKSIN-PDNVNPLVNRECYEVMFTKEPVLTELIEN 417
SET+ ILNA+LAN LGNLLNR L + D P V +E L +L E+
Sbjct: 341 SETRFVTILNADLANDLGNLLNRTLKMAWKYTDGKVPNVQGAA----IPREHPLRQLAEH 396
Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTF 477
L + Y + F++ + + NKF+D PW + + + +L
Sbjct: 397 ---LSQTYGQGYRQLAFHEVCQQALTLARAGNKFLDEEAPWKRYRAGETAAVAEILYCVL 453
Query: 478 EVLRICGIGLQPIVPKLADKLLTRLG 503
E +R+ L PI+P+L++ + +LG
Sbjct: 454 ESVRLVAYVLAPIIPQLSEAIYGQLG 479
>sp|O33925|SYM_THEMA Methionine--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=metG PE=3 SV=1
Length = 629
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 274/515 (53%), Gaps = 45/515 (8%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
+ITTPI+YVN+ PHIG YT ++AD R+ + + + TGTDEHG K+ AA +
Sbjct: 4 YITTPIYYVNSEPHIGSAYTTIVADIIARYKRFMGYDV--FFLTGTDEHGQKVLQAAQQA 61
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
+ +FC+++++++K ++K I +++RTT E H +TV K+K+ +Y YK
Sbjct: 62 GKDPQEFCDELAEKFKRLWKELKITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
GWYCV E+F E ++ K EE F E +PV+WVEE+NY
Sbjct: 122 GWYCVPCETFWNEDEVI---KEGEERF-----------------CPECKRPVKWVEEENY 161
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
F+LS Y + + + +++ D V+P N++ + D+S++R + WG+P+ DD
Sbjct: 162 FFRLSKYRDSLLKYYEEHPDFVEPDFRRNEMLKILEGGLKDLSITRTTFK--WGVPMKDD 219
Query: 247 DTQTIYVWLDALMNYLTVSGY----PDFHTW-PPHIQILGKDILKFHGIYWPAFLIAAGL 301
IYVW+DAL+NY++ GY F+ W P + ++GK+I +FH I WPA L++ GL
Sbjct: 220 PEHVIYVWVDALINYISAIGYGWNDEMFNKWWPADLHLIGKEINRFHSIIWPAMLMSVGL 279
Query: 302 EPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSET 361
PK H TV+G K+SKS+GN +DP + + + +RY+L+R+ D ++SE
Sbjct: 280 PLPKKVFAHGWLTVNGQKISKSLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEE 339
Query: 362 KAKNILNAELANTLGNLLNRC---LSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENC 418
+ + LN++LAN GNLL+R + K N +P +E ++ + E
Sbjct: 340 RLVHRLNSDLANDYGNLLHRITAMIKKYFNGRLPSPSA-QEGFDSWLKE-----RFFETK 393
Query: 419 QTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFE 478
HE + + + +D I + NK+ + TKPW L KE +E L VL + E
Sbjct: 394 DAYHELM----DSYRLTEALDKIWEFIADVNKYFNDTKPWILGKEGNMERLGTVLYNSLE 449
Query: 479 VLRICGIGLQPIVPKLADKLLTRLGI---PTNERL 510
+ + P++P ++++ R+ P+ E L
Sbjct: 450 AVFKVALMTLPVMPDTSEEVFRRVSFEEKPSKEHL 484
>sp|Q9PP85|SYM_CAMJE Methionine--tRNA ligase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=metG PE=3 SV=1
Length = 628
Score = 281 bits (719), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 270/533 (50%), Gaps = 62/533 (11%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
+ITTPI+YVN PH+GH YT ++AD RF +L TGTDEHG KI+ AA
Sbjct: 3 YITTPIYYVNDVPHLGHAYTTIIADTLARFYRLQGHETR--FLTGTDEHGQKIEEAAKLR 60
Query: 67 KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
++ +KIS ++K ++ ++I Y Y RTT H + ++ K+ Q+ IY ++Y+
Sbjct: 61 NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYE 120
Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
G YC+S ESF + Q+ D PD + ++E++Y
Sbjct: 121 GHYCISCESFFTQSQLINDCSC------------PD-----------CGKQTRILKEESY 157
Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVP-- 244
FKLS Y + + W ++ +D + PK N+L N D+S++R WGI +P
Sbjct: 158 FFKLSKYQDKILQWYEE-KDPILPKNKKNELINFVQNGLKDLSITR--TSFDWGIKLPQE 214
Query: 245 -DDDTQTIYVWLDALMNYLTVSGYPD----FHTWPPHIQILGKDILKFHGIYWPAFLIAA 299
+DD IYVWLDAL Y++ + + WP H+ ++GKDIL+FH IYWPAFL++
Sbjct: 215 INDDKHIIYVWLDALFIYVSSLDFQNKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSV 274
Query: 300 GLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYS 359
L PK H WT +G KMSKS GNVV P + + S RYFLLRE +D ++S
Sbjct: 275 DLPLPKFIGAHGWWTKEGEKMSKSKGNVVKPKEVVDAYGSEAFRYFLLREVPFGNDGDFS 334
Query: 360 ETKAKNILNAELANTLGNLLNRCLSKS-------INPDNVNPLVNRECYEVMFTKE--PV 410
E N +NAEL+N GNLLNR + S I+ + V N E + KE +
Sbjct: 335 ENMLINRINAELSNEFGNLLNRIIGMSTKYSQGNISKEGVLKFYNAELNQ---AKEHLNL 391
Query: 411 LTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELN 470
E +EN Q N Y ++ + L +AN I +PW+L KENK E+ N
Sbjct: 392 AVEFLENLQC------------NRY--LEELFKALSVANLAISKYEPWSLIKENKHEQAN 437
Query: 471 LVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFN 523
++ + +L + L P +PK + K+ L + + M DN++ +
Sbjct: 438 ALVALCANILAKTSLLLSPTLPKSSQKVALALNFEISSANYTKMIL-DNELLD 489
>sp|Q9KGK8|SYM_BACHD Methionine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=metG PE=3
SV=1
Length = 660
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 265/520 (50%), Gaps = 31/520 (5%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
+ T ++TTPI+Y + HIGH YT + DA R+ +L + + TGTDEHG KI+
Sbjct: 5 QKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYNV--MYLTGTDEHGQKIEQK 62
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A L F ++I + ++K DI Y ++RTT E H + V ++ +L + IY
Sbjct: 63 AEAKGLTPKQFVDEIVSGIQDLWKKLDISYDDFIRTTEERHIKVVQQIFEQLLDQGDIYL 122
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
Y+GWY + +E+F E Q+ E + + + + S +S PVE V
Sbjct: 123 GDYEGWYSIPDETFYTETQLVDKEYDADGNLIGGK-------------SPDSGHPVEKVR 169
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGI 241
EQ+Y F++S Y + + + ++N ++P+ N++ N D++VSR WG+
Sbjct: 170 EQSYFFRMSKYADRLLQFYEENPQFIQPESRKNEMINNFIKPGLEDLAVSR--TSFTWGV 227
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAF 295
PVP D +YVW+DAL NY+T GY WP + ++GK+I++FH IYWP
Sbjct: 228 PVPRDPKHVVYVWIDALSNYITALGYGSDQQEKYENYWPADVHLVGKEIVRFHTIYWPIM 287
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A L PK H + KMSKS GNVVDP+ + + LRY+LLRE SD
Sbjct: 288 LMALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVDPVPLIDRYGLDALRYYLLREVPFGSD 347
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELI 415
++ +N +LAN LGNLLNR ++ + + + + P +L+
Sbjct: 348 GVFTPEAFVERVNYDLANDLGNLLNRTVAM------IEKYFDGKIPSYVKDGTPFDADLV 401
Query: 416 ENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLVLG 474
E + + V+ E F + +I ++ NK+ID T+PW L K E+K E+L +
Sbjct: 402 ELVYSTVKKVEDAMEEMEFSIALTAIGQLISRTNKYIDETQPWVLAKDESKREQLGAAMY 461
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
E +R + LQP + K K+ +LGI ++ W+++
Sbjct: 462 HLAESIRYVSVLLQPFMTKAPQKIWEQLGIDSSLTTWESL 501
>sp|P23395|SYM_THET8 Methionine--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=metG PE=1 SV=2
Length = 618
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 260/527 (49%), Gaps = 56/527 (10%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
+ ++TTPI+YVNA PH+GH YT ++AD R+ +L R + TGTDEHG +
Sbjct: 1 MEKVFYVTTPIYYVNAEPHLGHAYTTVVADFLARWHRLDGYR--TFFLTGTDEHGETVYR 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
AA + F +++S ++K + I Y ++RTT E H + V V K+ + IY
Sbjct: 59 AAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYDDFIRTTEERHKKVVQLVLKKVYEAGDIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
+Y+G YCVS E F E ++ E H +PVE
Sbjct: 119 YGEYEGLYCVSCERFYTEKEL-------VEGLCPIH-----------------GRPVERR 154
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGI 241
+E NY F++ Y + ++ +N D+++P+ + N++ M +E D+S+SRPK+RV WGI
Sbjct: 155 KEGNYFFRMEKYRPWLQEYIQENPDLIRPEGYRNEVLAMLAEPIGDLSISRPKSRVPWGI 214
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT----WPPHIQILGKDILKFHGIYWPAFLI 297
P+P D+ YVW DAL+NY++ YP+ WP ++GKDILK H ++WP L
Sbjct: 215 PLPWDENHVTYVWFDALLNYVSALDYPEGEAYRTFWPHAWHLIGKDILKPHAVFWPTMLK 274
Query: 298 AAGLEPPKSFLVHSHWTV-------DGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREG 350
AAG+ ++ H V DG KMSK++GNVVDP + L + LRY+LLRE
Sbjct: 275 AAGIP------MYRHLNVGGFLLGPDGRKMSKTLGNVVDPFALLEKYGRDALRYYLLREI 328
Query: 351 TNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPV 410
D+ SE + A+LA+ LGNL+ R + + EPV
Sbjct: 329 PYGQDTPVSEEALRTRYEADLADDLGNLVQRTRAMLFR------------FAEGRIPEPV 376
Query: 411 LTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELN 470
E + L ++ E F+ ++ + + N++I+ KPW L K+ EE
Sbjct: 377 AGEELAEGTGLAGRLRPLVRELKFHVALEEAMAYVKALNRYINEKKPWELFKKEP-EEAR 435
Query: 471 LVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFS 517
VL E LRI I L P +P +L LG+ RL + R+
Sbjct: 436 AVLYRVVEGLRIASILLTPAMPDKMAELRRALGLKEEVRLEEAERWG 482
>sp|P23920|SYM_GEOSE Methionine--tRNA ligase OS=Geobacillus stearothermophilus GN=metG
PE=3 SV=1
Length = 649
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 264/521 (50%), Gaps = 43/521 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K T ++TTPI+Y + HIGH YT + DA R+ +L + + TGTDEHG KIQ
Sbjct: 3 KKTFYLTTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDV--MYLTGTDEHGQKIQRK 60
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + + + I + +++ DI Y ++RTT E H + V ++ +L ++ IY
Sbjct: 61 AQEKGVTPQQYVDDIVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDIYL 120
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+GWYC ESF E Q L++ PD +PVE V+
Sbjct: 121 GEYEGWYCTPCESFYTERQ------------LVDGNC-PD-----------CGRPVEKVK 156
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGI 241
E++Y F++S Y++ + + ++N D ++P+ N++ N D++VSR WGI
Sbjct: 157 EESYFFRMSKYVDRLLQYYEENPDFIQPESRKNEMINNFIKPGLEDLAVSR--TTFDWGI 214
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGY-----PDFHT-WPPHIQILGKDILKFHGIYWPAF 295
VP D IYVW+DAL NY+T GY F WP + ++GK+I++FH IYWP
Sbjct: 215 KVPGDPKHVIYVWIDALANYITALGYGTDNDEKFRKYWPADVHLVGKEIVRFHTIYWPIM 274
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A GL PK H + KMSKS GNVVDP+ + + LRY+LLRE SD
Sbjct: 275 LMALGLPLPKKVFGHGWLLMKDGKMSKSKGNVVDPVMIIDRYGLDALRYYLLREVPFGSD 334
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELI 415
++ +N +LAN LGNLL+R ++ + K P +L
Sbjct: 335 GVFTPEGFIERINYDLANDLGNLLHRTVAM------IEKYFGGAIPPYRGPKTPFDRDLS 388
Query: 416 ENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLVLG 474
E + + + F + ++ ++ NK+ID T+PW L K E+K EEL V+
Sbjct: 389 ETAREVVRQYEEAMERMEFSVALSAVWQLIGRTNKYIDETQPWVLAKEESKREELASVMA 448
Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNE-RLWDNM 514
E LR + LQP + + +++ T+LGI + WD++
Sbjct: 449 HLAESLRYTAVLLQPFLTRTPERIFTQLGISDRSLKEWDSL 489
>sp|Q8RE57|SYM_FUSNN Methionine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=metG PE=3 SV=1
Length = 636
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 270/527 (51%), Gaps = 51/527 (9%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K F++TPI+YVN PH+G YT + AD +R+ K + + + TG DEHG K++ A
Sbjct: 2 KKNFFVSTPIYYVNGDPHVGSAYTTIAADVINRYNKAMG--MDTHFVTGLDEHGQKVEQA 59
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A ++ + +K++ +K M+ DI+Y ++RTT + H + V + + + IY
Sbjct: 60 AKQNGFTPQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYK 119
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+G YCVS E+F E+Q+ K PD + + ++
Sbjct: 120 GEYEGKYCVSCETFFPENQLNGSNKC------------PD-----------CGKDLTVLK 156
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIP 242
E++Y FK+S Y + + +D++ D + P N++ + + D+S+SR WGIP
Sbjct: 157 EESYFFKMSKYADALLKHIDEHPDFILPHSRRNEVISFIKQGLQDLSISR--NTFSWGIP 214
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPD-------FHTWPPHIQILGKDILKFHGIYWPAF 295
+ YVW DAL NY+T +G+ + F + ++GKDI++FH I WP
Sbjct: 215 IDFAPGHITYVWFDALTNYITSAGFENDENKFDKFWNNSRVVHLIGKDIIRFHAIIWPCM 274
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L++AG++ P S + H WT +G KMSKS GNVV+P ++ + RY+LLRE +D
Sbjct: 275 LLSAGIKLPDSIVAHGWWTSEGEKMSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTD 334
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTKEPVLT 412
+YS LN++LAN LGNLLNR L K N V+ T EP+
Sbjct: 335 GDYSTKGIIGRLNSDLANDLGNLLNRTLGMYKKYFNGTIVSSS----------TVEPIDD 384
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
E+ + +DV+ + F F + +++I + NK+ID T PWTL K E K L
Sbjct: 385 EIKSMFNDVVKDVEKYMYLFEFSRALETIWKFISRLNKYIDETMPWTLAKNEAKKARLAA 444
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSD 518
V+ + E L + P +P+ A K+ +LGI ++ N++F D
Sbjct: 445 VMNILCEGLYKIAFLIAPYMPESAQKISNQLGI---DKDITNLKFDD 488
>sp|Q8XHG1|SYM_CLOPE Methionine--tRNA ligase OS=Clostridium perfringens (strain 13 /
Type A) GN=metG PE=3 SV=1
Length = 645
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 269/524 (51%), Gaps = 51/524 (9%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K +ITTPI+Y + + HIG+ YT + ADA RF +L + + TGTDEHG KI+
Sbjct: 3 KKPYYITTPIYYPSTNLHIGNTYTTVAADAIARFKRLTGHEV--MFLTGTDEHGQKIERI 60
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + + ++I K ++K +I Y ++RTT ++H + V ++ KL + IY
Sbjct: 61 ANEKGITPKEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYK 120
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+ Y+G YC ESF E Q L + PD +PVE +
Sbjct: 121 DSYEGLYCTPCESFWTETQ-------------LVNGNCPD-----------CGRPVEKAK 156
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQ-LRNMCSEIENDISVSRPKARVHWGI 241
E+ Y FK+S Y + + +++++ D ++P+ N+ L N D+ VSR WGI
Sbjct: 157 EEAYFFKMSKYADRLIQYIEEHPDFIQPESRKNEMLNNFLRPGLQDLCVSR--TSFTWGI 214
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAF 295
PV D+ IYVW+DAL NY+T GY + WP + ++GKDIL+FH IYWP
Sbjct: 215 PVSFDEKHVIYVWIDALSNYITALGYGQENQELYKKFWPADVHLIGKDILRFHTIYWPIM 274
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A GLE PK H VDG KMSKS GNVVDP+ ++ F + +RY+LLRE SD
Sbjct: 275 LMALGLELPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSD 334
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFT---KEPVLT 412
++ +N +LAN LGNLL+R ++ +V + V+ KEP+
Sbjct: 335 GLFNNEIFIKKVNTDLANDLGNLLSRTIA----------MVYKYFGGVIQAPTCKEPIDD 384
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
ELI + V+ + ++SI ++ ANK+ID T PW L K E K E L
Sbjct: 385 ELINLALSTPGKVEASIDALKIPEALESIWTLISRANKYIDETTPWILAKDEEKKERLGT 444
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMR 515
VL E LR + + P + + + K+ +L T W++++
Sbjct: 445 VLYNLLETLRFVSVMISPFLTETSVKINAQLN--TKVTTWESLK 486
>sp|Q97EW5|SYM_CLOAB Methionine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=metG PE=3 SV=1
Length = 644
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 269/527 (51%), Gaps = 49/527 (9%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K +ITTPI+Y +A HIG+ YT + +DA RF +L + + TGTDEHG KIQ
Sbjct: 4 KKKFYITTPIYYPSAKLHIGNTYTTVASDALVRFKRLQG--YDAFMLTGTDEHGQKIQRI 61
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + ++I K ++K +I Y ++RTT E H + V + K IY
Sbjct: 62 AEDKGITPKAYVDEIVAGIKDLWKMMNISYDKFIRTTDEEHVKAVQKIVKKFYDNGDIYK 121
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+ Y+GWYC ESF E Q L++ + PD +PVE +
Sbjct: 122 SAYEGWYCTPCESFWTETQ------------LVDGKC-PD-----------CGRPVEKTK 157
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQ-LRNMCSEIENDISVSRPKARVHWGI 241
E+ Y FK+S Y + + +++ + D ++P+ N+ L N D+ +SR + WGI
Sbjct: 158 EEAYFFKMSKYADRLIKYIEDHPDFIQPESRKNEMLNNFLKPGLQDLCISR--SSFDWGI 215
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAF 295
P+ D+ IYVW+DAL NY+T GY + WP + ++GKDI++FH IYWP
Sbjct: 216 PITFDEKHVIYVWIDALSNYITALGYGSDNDELYNKFWPADLHLVGKDIIRFHTIYWPIM 275
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A L PK H VDG KMSKS GNVVDP+ +++F + +RY+LL E SD
Sbjct: 276 LMALDLPLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSD 335
Query: 356 SNYSETKAKNILNAELANTLGNLLNR--CLSKSINPDNVNPLVNRECYEVMFTKEPVLTE 413
++ +N++LAN LGNL++R + + ++ P V+ KE + E
Sbjct: 336 GLFNNEIFIKKINSDLANDLGNLVSRTAAMIEKYFDGSIQPPVD---------KEEIDNE 386
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLV 472
LI+ +L E + + + +D I ++ ANK+ID T PW L K ENK L V
Sbjct: 387 LIDMAISLPEKLDEDIKKLKIPEALDHIWDLIKRANKYIDETTPWVLAKDENKKARLGTV 446
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDN 519
L E LR L P +P+ +K+ T+L I + W+++ D
Sbjct: 447 LYNLVESLRFVATTLTPFLPETGEKIKTQLNIELD--TWESLSAFDG 491
>sp|Q837B3|SYM_ENTFA Methionine--tRNA ligase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=metG PE=3 SV=1
Length = 669
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 268/530 (50%), Gaps = 44/530 (8%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K T +ITTPI+Y + HIG+ YT + DA R+ +L+ TG DEHG KI+
Sbjct: 4 KETFYITTPIYYPSGKLHIGNSYTTIACDAMARYKRLMG--FDVFYLTGVDEHGQKIEKK 61
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + ++ +K++ + ++KT DI Y ++RTT ++H V ++ +L ++ IY
Sbjct: 62 AAELNVTPKEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYL 121
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKN--EGQYVSIESNQPVEW 180
+Y+GWY VS+E F E Q L R DE N G+ S VE
Sbjct: 122 GEYEGWYSVSDEEFFTETQ-------------LAEVYRDDEGNVIGGK---APSGHEVEL 165
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQ-LRNMCSEIENDISVSRPKARVHW 239
V+E++Y F++S Y + + + +++ + ++P+ N+ L N D++VSR W
Sbjct: 166 VKEESYFFRMSKYADRLVQYYEEHPEFIQPESRKNEMLNNFIKPGLEDLAVSR--TTFSW 223
Query: 240 GIPVPDDDTQTIYVWLDALMNYLTVSGYPD-----FHT-WPPHIQILGKDILKFHGIYWP 293
GIP+ +D +YVW+DAL NY+T GY F WP ++Q++GK+I++FH IYWP
Sbjct: 224 GIPLKNDPKHVVYVWIDALSNYITALGYGSEDDSLFQKYWPANVQMVGKEIVRFHTIYWP 283
Query: 294 AFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNH 353
L+A L PK H + KMSKS GNVV P + + LRY+LLR
Sbjct: 284 IMLMALDLPLPKKVFGHGWLLMKDGKMSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFG 343
Query: 354 SDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTE 413
SD ++ + LN +LAN LGNLLNR ++ ++N+ C + +T
Sbjct: 344 SDGVFTPEDFVSRLNYDLANDLGNLLNRTIA----------MINKYCDGKVPAYASKVTP 393
Query: 414 LIENCQTLHEDVKLHYSE----FNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEE 468
T +V Y E F + I ++ ANK+ID T PW L K E K E
Sbjct: 394 FDSELSTTAANVIGKYHEAMEKMEFNTAIAEIWTLVSRANKYIDETAPWVLAKEEEKRNE 453
Query: 469 LNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSD 518
L V+ E LRI I LQP++ + K+ +LG+ +N+ F +
Sbjct: 454 LESVMIHLAESLRIVAILLQPVMTETPGKIFEQLGLDPETMNMENIHFGE 503
>sp|P37465|SYM_BACSU Methionine--tRNA ligase OS=Bacillus subtilis (strain 168) GN=metG
PE=3 SV=1
Length = 664
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/525 (32%), Positives = 276/525 (52%), Gaps = 42/525 (8%)
Query: 4 STCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAA 63
+T +ITTPI+Y + HIGH YT + DA R+ +L + + TGTDEHG KIQ A
Sbjct: 6 NTFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRLKGFDVRYL--TGTDEHGQKIQQKA 63
Query: 64 IKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPN 123
+ + ++ ++ + + ++K +I ++RTT + H + V+ KL IY +
Sbjct: 64 EQENITPQEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYLD 123
Query: 124 KYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEE 183
+Y+GWY + +E+F E Q+ E+NE+ + G+ S +S PVE ++E
Sbjct: 124 EYEGWYSIPDETFYTETQLVDIERNEKGEVI-----------GGK--SPDSGHPVELIKE 170
Query: 184 QNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGIP 242
++Y F++ Y + + + ++N ++P+ N++ N D++VSR WG+
Sbjct: 171 ESYFFRMGKYADRLLKYYEENPTFIQPESRKNEMINNFIKPGLEDLAVSR--TTFDWGVK 228
Query: 243 VPDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFL 296
VP++ +YVW+DAL NYLT GY + WP + ++GK+I++FH IYWP L
Sbjct: 229 VPENPKHVVYVWIDALFNYLTALGYDTENDELYQKYWPADVHLVGKEIVRFHTIYWPIML 288
Query: 297 IAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDS 356
+A L PK H + KMSKS GNVVDP++ + + LRY+LLRE SD
Sbjct: 289 MALDLPLPKQVFAHGWLLMKDGKMSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDG 348
Query: 357 NYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIE 416
++ +N +LAN LGNLLNR ++ ++N+ + + + +TE
Sbjct: 349 VFTPEGFVERINYDLANDLGNLLNRTVA----------MINKYFDGQIGSYKGAVTEFDH 398
Query: 417 NCQTLHEDVKLHYSE----FNFYKGVDSIILVLHLANKFIDTTKPWTLRKE-NKIEELNL 471
++ E+ Y + F + ++ ++ NK+ID T PW L K+ K EEL
Sbjct: 399 TLTSVAEETVKAYEKAMENMEFSVALSTLWQLISRTNKYIDETAPWVLAKDPAKEEELRS 458
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERL--WDNM 514
V+ E LRI + LQP + K +K+ +LGI T+E L WD++
Sbjct: 459 VMYHLAESLRISAVLLQPFLTKTPEKMFEQLGI-TDESLKAWDSI 502
>sp|Q724N6|SYM_LISMF Methionine--tRNA ligase OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=metG PE=3 SV=1
Length = 665
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 273/524 (52%), Gaps = 39/524 (7%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+T +ITTPI+Y + HIGH YT + DA R+ +L + TGTDEHG KIQ
Sbjct: 6 KNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDV--FYLTGTDEHGQKIQAK 63
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + ++ ++I++ ++ ++K +I T ++RTT + H +V ++ +L ++ IY
Sbjct: 64 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 123
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+GWY VS+E + E Q+ ++ DE + S VE V+
Sbjct: 124 GEYEGWYSVSDEEYFTETQL--------------EEVYKDENGKVIGGKAPSGNEVELVK 169
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGI 241
E++Y F++S Y + + + + + + + P+ N++ N D++VSR WGI
Sbjct: 170 EESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSR--TTFDWGI 227
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGY-PDFHT-----WPPHIQILGKDILKFHGIYWPAF 295
VP + +YVW+DAL NY+T GY D T WP +QI+GK+I++FH IYWP
Sbjct: 228 KVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIM 287
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A L PK H + KMSKS GNVVDP + + LRY+LLRE SD
Sbjct: 288 LMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSD 347
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRE--CYEVMFTK-EPVLT 412
++ + +N +LAN LGNLLNR ++ +N + E Y+ T+ + L
Sbjct: 348 GLFTPEDFVDRVNFDLANDLGNLLNRTVAM------INKYFDGEIPAYQGNVTEFDQTLV 401
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
+ N +E H F ++ + ++ NK+ID T PWTL K E+K EL
Sbjct: 402 DFKNNVVKEYEGSMDH---MQFSVALNQLWSLISRTNKYIDETAPWTLAKDEDKRTELAS 458
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGI-PTNERLWDNM 514
V+ E LRI + LQP + + ++ +LG+ N + WD++
Sbjct: 459 VMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSI 502
>sp|Q9CHE0|SYM_LACLA Methionine--tRNA ligase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=metG PE=3 SV=1
Length = 662
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 265/521 (50%), Gaps = 34/521 (6%)
Query: 5 TCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAI 64
T +ITTPI+Y + H+G YT + D R+ +L+ + TG DEHG+KIQ A
Sbjct: 6 TFYITTPIYYPSGKLHLGSSYTTIACDVLARYKRLMG--FDTFYLTGLDEHGMKIQRKAE 63
Query: 65 KHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNK 124
+ + ++ + ++ + ++K DI Y ++RTT +H V + +L ++D IY K
Sbjct: 64 ELGMTPKEYLDPMAADVQELWKKLDISYDKFIRTTDTYHEEAVAKAFEQLLEQDDIYLGK 123
Query: 125 YKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQ 184
Y GWY VS+E F E Q+ +E +ES + I P S VEWVEE+
Sbjct: 124 YAGWYSVSDEEFFTETQL--EEIFRDESGNITGGIAP------------SGHEVEWVEEE 169
Query: 185 NYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGIPV 243
Y F++ Y + + + D++ D ++P+ N++ N D++++R WGIPV
Sbjct: 170 TYFFRMGKYADWLLQYYDEHPDFIQPEVRKNEMVNNFIKPGLEDLALTR--TSFTWGIPV 227
Query: 244 PDDDTQTIYVWLDALMNYLTVSGY-----PDFHTWPPHIQILGKDILKFHGIYWPAFLIA 298
P + +YVW DAL+NY+T GY +F + P I ++GK+I++FH IYWP L A
Sbjct: 228 PSNPKHVVYVWFDALLNYITALGYNSDNDSNFKKYWPGINMVGKEIVRFHTIYWPIMLHA 287
Query: 299 AGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNY 358
GL PK H + KMSKS GNVV P + + +RY+L+R + D +
Sbjct: 288 LGLPAPKKIFAHGWLLMKDGKMSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIF 347
Query: 359 SETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENC 418
+ +N +LAN LGNLLNR +S IN N + E V + L E++E
Sbjct: 348 TPEDFVGRINFDLANDLGNLLNRTVS-MINKYNDGKI---EATGVSTEFDASLEEVVEET 403
Query: 419 QT-LHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLVLGVT 476
+ H+ + +F F + + ++ NK+ID T PW L K E+ +LN VL
Sbjct: 404 ISHFHKAM----DKFEFNVALADVWTLISRTNKYIDETAPWVLAKSEDDKAKLNNVLYHL 459
Query: 477 FEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFS 517
E LRI G LQP + + K+ +LG+ +N+ F
Sbjct: 460 AENLRIAGALLQPFMRATSGKIFEQLGMDERSFSLENLSFG 500
>sp|Q8YAF2|SYM_LISMO Methionine--tRNA ligase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=metG PE=3 SV=1
Length = 664
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 273/524 (52%), Gaps = 39/524 (7%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+T +ITTPI+Y + HIGH YT + DA R+ +L + TGTDEHG KIQ
Sbjct: 5 KNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDV--FYLTGTDEHGQKIQAK 62
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + ++ ++I++ ++ ++K +I T ++RTT + H +V ++ +L ++ IY
Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+GWY VS+E + E Q+ ++ DE + S VE V+
Sbjct: 123 GEYEGWYSVSDEEYFTETQL--------------EEVYKDENGKVIGGKAPSGNEVELVK 168
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGI 241
E++Y F++S Y + + + + + + + P+ N++ N D++VSR WGI
Sbjct: 169 EESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSR--TTFDWGI 226
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGY-PDFHT-----WPPHIQILGKDILKFHGIYWPAF 295
VP + +YVW+DAL NY+T GY D T WP +QI+GK+I++FH IYWP
Sbjct: 227 KVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIM 286
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A L PK H + KMSKS GNVVDP + + LRY+LLRE SD
Sbjct: 287 LMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSD 346
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRE--CYEVMFTK-EPVLT 412
++ + +N +LAN LGNLLNR ++ +N + E Y+ T+ + +L
Sbjct: 347 GLFTPEDFVDRVNFDLANDLGNLLNRTVAM------INKYFDGEIPAYQGNVTEFDQILV 400
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
+ N +E H F ++ + ++ NK+ID T PW L K E+K EL
Sbjct: 401 DFKNNVVKEYEGSMDH---MQFSVALNQLWSLISRTNKYIDETAPWALAKDEDKRTELAS 457
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIP-TNERLWDNM 514
V+ E LRI + LQP + + ++ +LG+ N + WD++
Sbjct: 458 VMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSI 501
>sp|Q92F90|SYM_LISIN Methionine--tRNA ligase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=metG PE=3 SV=1
Length = 664
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 272/524 (51%), Gaps = 39/524 (7%)
Query: 3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
K+T +ITTPI+Y + HIGH YT + DA R+ +L + TGTDEHG KIQ
Sbjct: 5 KNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKGYDV--FYLTGTDEHGQKIQAK 62
Query: 63 AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
A + + ++ ++I++ ++ ++K +I T ++RTT + H +V ++ +L ++ IY
Sbjct: 63 AKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQDRHKTSVEKIFEQLLEQGDIYL 122
Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
+Y+GWY VS+E + E Q+ ++ DE + S VE V+
Sbjct: 123 GEYEGWYSVSDEEYFTETQL--------------EEVYKDENGKVIGGKAPSGNEVELVK 168
Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGI 241
E++Y F++S Y + + + + + + + P+ N++ N D++VSR WGI
Sbjct: 169 EESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAVSR--TTFDWGI 226
Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGY-PDFHT-----WPPHIQILGKDILKFHGIYWPAF 295
VP + +YVW+DAL NY+T GY D T WP +QI+GK+I++FH IYWP
Sbjct: 227 KVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEIVRFHTIYWPIM 286
Query: 296 LIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSD 355
L+A L PK H + KMSKS GNVVDP + + LRY+LLRE SD
Sbjct: 287 LMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSD 346
Query: 356 SNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRE--CYEVMFTK-EPVLT 412
++ + +N +LAN LGNLLNR ++ +N + E Y+ T+ + L
Sbjct: 347 GLFTPEDFVDRVNYDLANDLGNLLNRTVAM------INKYFDGEIPAYQGNVTEFDQTLV 400
Query: 413 ELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNL 471
+ N +E H F ++ + ++ NK+ID T PW L K E+K EL
Sbjct: 401 DFKNNVVKEYEGSMDH---MQFSVALNQLWSLISRTNKYIDETAPWALAKEEDKRTELAS 457
Query: 472 VLGVTFEVLRICGIGLQPIVPKLADKLLTRLGI-PTNERLWDNM 514
V+ E LRI + LQP + + ++ +LG+ N + WD++
Sbjct: 458 VMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSI 501
>sp|Q9RUF3|SYM_DEIRA Methionine--tRNA ligase OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=metG PE=3 SV=1
Length = 681
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 255/509 (50%), Gaps = 45/509 (8%)
Query: 7 FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
FIT I Y N +PHIGH+Y +LADA R+ +L ++ ++ GTDEHG KI AA K
Sbjct: 21 FITAAIDYANGTPHIGHVYEKILADAIARYQRLAGRDVTFVM--GTDEHGEKISKAAAKG 78
Query: 67 KLETIDFCNKISDQ-YKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKY 125
+ + + +S++ ++ ++K I Y ++RTTS H + V V ++ IY +Y
Sbjct: 79 GVTPQELVDDLSERAFQGLWKKLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIYFAEY 138
Query: 126 KGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQN 185
+G Y V E ++ E ++ E +G P E E N
Sbjct: 139 EGLYSVGAERYVTEKELV-------------------EGPDGVRRFPGDKDPPELRREAN 179
Query: 186 YMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPD 245
Y F + Y + L +N D+++P + N++ M E +S+SRPKARV WGI +P
Sbjct: 180 YFFNMQKYQPWLLETLQQNPDLIQPAGYRNEVLEMLKEDIGPLSISRPKARVPWGIELPW 239
Query: 246 DDTQTIYVWLDALMNYLT--VSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEP 303
D YVW DAL++YLT VS D ++GKDILK H ++WP L AAGL
Sbjct: 240 DTDHVTYVWFDALLSYLTPLVSQGQDASMSGKAWHVIGKDILKPHAVFWPTMLRAAGLPL 299
Query: 304 PKSFLVHSHWTV-DGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETK 362
+ +VHSH DG KM KS+GN +DP ++ + +RY LLRE + +DS + E
Sbjct: 300 YRRLVVHSHILAEDGRKMGKSLGNAIDPEELVAAWPVDAIRYALLREASLGADSPFGEGV 359
Query: 363 AKNILNAELANTLGNLLNRCLS------KSINPDNVNPLVNRECYEVMFTKEPVLTELIE 416
+ LN++LAN LGNLL+R +S + P P +RE E+
Sbjct: 360 LVSRLNSDLANDLGNLLSRTVSMIQKYRGGVIPAATEP-TDRE------------REIEA 406
Query: 417 NCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE-ELNLVLGV 475
+ L ++V E +D+ + + N++I + PWTL K + + L+ VL
Sbjct: 407 AARALPDEVLRLVDELKINMAIDAAMSFVRDLNRYIAESTPWTLAKSPETQGRLDTVLYT 466
Query: 476 TFEVLRICGIGLQPIVPKLADKLLTRLGI 504
E LR+ + L+ ++P A +L +LG+
Sbjct: 467 AAEGLRVASVALEAVIPTKAKELREQLGL 495
>sp|Q81JA8|SYM1_BACCR Methionine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=metG1 PE=3 SV=1
Length = 660
Score = 261 bits (667), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 168/524 (32%), Positives = 269/524 (51%), Gaps = 43/524 (8%)
Query: 5 TCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAI 64
+ +ITTPI+Y + HIGH YT + DA R+ ++ + + TGTDEHG KIQ A
Sbjct: 7 SFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKRMQGYNVHYL--TGTDEHGQKIQKKAE 64
Query: 65 KHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNK 124
+ + + + I K +++ +I Y ++RTT + H V ++ +L + IY ++
Sbjct: 65 ELNITPQAYVDNIVAGIKELWEKMNISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDE 124
Query: 125 YKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQ 184
Y+GWY V +E+F EHQ L++ + D+ G+ S +S VE V E+
Sbjct: 125 YEGWYSVQDETFYTEHQ------------LVDPIMEGDKVVGGK--SPDSGHDVELVREE 170
Query: 185 NYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGIPV 243
+Y F++ Y++ + + + N ++P+ N++ N D++VSR WG+ V
Sbjct: 171 SYFFRMGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSR--TSFDWGVRV 228
Query: 244 PDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFLI 297
P + IYVW+DAL NY+T GY + WP + ++GK+I++FH IYWP L+
Sbjct: 229 PGNPKHVIYVWVDALSNYITALGYGTANEEKYKKFWPADVHLVGKEIVRFHTIYWPIILM 288
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
A L PK H + KMSKS GNVVDP++ + + LRY+LLRE SD
Sbjct: 289 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGV 348
Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
++ +N +LAN LGNLLNR ++ ++++ + + +TE E
Sbjct: 349 FTPEGFVERINFDLANDLGNLLNRTVA----------MIDKYFSGEIPAFKANVTEFDET 398
Query: 418 CQTLHED----VKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLV 472
+D V+ F + SI ++ NK+ID T+PW L K EN E+L V
Sbjct: 399 LVAFAQDTLKKVEEAMENMEFSVALGSIWQLVSRTNKYIDETQPWVLAKDENDREKLASV 458
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNE--RLWDNM 514
+ EVLR GI L P + K+ +LG+ T+E + W+++
Sbjct: 459 MAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGL-TDEAHKSWESL 501
>sp|Q81W03|SYM1_BACAN Methionine--tRNA ligase 1 OS=Bacillus anthracis GN=metG1 PE=3 SV=1
Length = 660
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 259/512 (50%), Gaps = 40/512 (7%)
Query: 5 TCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAI 64
+ +ITTPI+Y + HIGH YT + DA R+ + + + TGTDEHG KIQ A
Sbjct: 7 SFYITTPIYYPSGKLHIGHAYTTVAGDAMARYKCMQGYNVHYL--TGTDEHGQKIQKKAE 64
Query: 65 KHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNK 124
+ + + + I K +++ DI Y ++RTT + H V ++ +L + IY ++
Sbjct: 65 ELNVTPQAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDE 124
Query: 125 YKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQ 184
Y+GWY V +E+F EHQ L++ + D+ G+ S +S VE V E+
Sbjct: 125 YEGWYSVQDETFYTEHQ------------LVDPIMEGDKVVGGK--SPDSGHDVELVREE 170
Query: 185 NYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWGIPV 243
+Y F++ Y++ + + + N ++P+ N++ N D++VSR WG+ V
Sbjct: 171 SYFFRMGKYVDRLLKFYEDNPHFIQPESRKNEMINNFIKPGLEDLAVSR--TSFDWGVRV 228
Query: 244 PDDDTQTIYVWLDALMNYLTVSGYPDFHT------WPPHIQILGKDILKFHGIYWPAFLI 297
P + IYVW+DAL NY+T GY + WP + ++GK+I++FH IYWP L+
Sbjct: 229 PGNPKHVIYVWVDALSNYITALGYGTENEEMYKKFWPADVHLVGKEIVRFHTIYWPIILM 288
Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
A L PK H + KMSKS GNVVDP+ + + LRY+LLRE SD
Sbjct: 289 ALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGV 348
Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
++ +N +LAN LGNLLNR ++ ++ N E + +TE E
Sbjct: 349 FTPEGFVERINFDLANDLGNLLNRTVAM------IDKYFNGEIPAF----KANVTEFDET 398
Query: 418 CQTLHED----VKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK-ENKIEELNLV 472
T +D V+ F + SI ++ NK+ID T+PW L K E+ E+L V
Sbjct: 399 LVTFAKDTLKKVEEAMENMEFSVALSSIWQLVSRTNKYIDETQPWVLAKDEDDREKLASV 458
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGI 504
+ EVLR GI L P + K+ +LG+
Sbjct: 459 MAHLAEVLRQTGIMLMPFLTVAPSKMFAQLGL 490
>sp|P0DG49|SYM_STRPQ Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=metG PE=3 SV=1
Length = 665
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 250/512 (48%), Gaps = 33/512 (6%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
K +ITTPI+Y + HIG YT + D R+ +L+ + TG DEHG KIQ
Sbjct: 1 MKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEV--FYLTGLDEHGQKIQT 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
A + + + + ++ K +++ DI Y ++RTT ++H V V+ KL +D IY
Sbjct: 59 KAKEAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
+Y GWY VS+E F E Q++ ++E+ + I P S VEWV
Sbjct: 119 LGEYSGWYSVSDEEFFTESQLKEVFRDEDGQVI--GGIAP------------SGHEVEWV 164
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWG 240
E++Y +LS Y + + + + D ++P N++ +N D++VSR WG
Sbjct: 165 SEESYFLRLSKYADRLVAFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSR--TTFTWG 222
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPDFH------TWPPHI-QILGKDILKFHGIYWP 293
+PVP D +YVW+DAL+NY T GY + W + ++GKDIL+FH IYWP
Sbjct: 223 VPVPSDPKHVVYVWIDALLNYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWP 282
Query: 294 AFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNH 353
L+ L P + H + + KMSKS GNVV P + F LRY+L+R
Sbjct: 283 ILLMMLDLPMPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVG 342
Query: 354 SDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTE 413
SD ++ +N ELAN LGNLLNR ++ +N + + +
Sbjct: 343 SDGTFTPEDYVGRINYELANDLGNLLNRTVAM------INKYFDGTVPAYVDNGTAFDAD 396
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE-ELNLV 472
L + D H ++ + ++++ ++ NK+ID T PW L KE+ + +L V
Sbjct: 397 LSQVIDAQLADYHKHMEAVDYPRALEAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASV 456
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGI 504
+ LR+ +QP + + + ++ +LG+
Sbjct: 457 MAHLAASLRVVAHVIQPFMMETSAAIMAQLGL 488
>sp|P0DG48|SYM_STRP3 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=metG PE=3 SV=1
Length = 665
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 250/512 (48%), Gaps = 33/512 (6%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
K +ITTPI+Y + HIG YT + D R+ +L+ + TG DEHG KIQ
Sbjct: 1 MKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEV--FYLTGLDEHGQKIQT 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
A + + + + ++ K +++ DI Y ++RTT ++H V V+ KL +D IY
Sbjct: 59 KAKEAGITPQTYVDNMAKDVKALWQLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
+Y GWY VS+E F E Q++ ++E+ + I P S VEWV
Sbjct: 119 LGEYSGWYSVSDEEFFTESQLKEVFRDEDGQVI--GGIAP------------SGHEVEWV 164
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWG 240
E++Y +LS Y + + + + D ++P N++ +N D++VSR WG
Sbjct: 165 SEESYFLRLSKYADRLVAFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSR--TTFTWG 222
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPDFH------TWPPHI-QILGKDILKFHGIYWP 293
+PVP D +YVW+DAL+NY T GY + W + ++GKDIL+FH IYWP
Sbjct: 223 VPVPSDPKHVVYVWIDALLNYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWP 282
Query: 294 AFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNH 353
L+ L P + H + + KMSKS GNVV P + F LRY+L+R
Sbjct: 283 ILLMMLDLPMPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVG 342
Query: 354 SDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTE 413
SD ++ +N ELAN LGNLLNR ++ +N + + +
Sbjct: 343 SDGTFTPEDYVGRINYELANDLGNLLNRTVAM------INKYFDGTVPAYVDNGTAFDAD 396
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE-ELNLV 472
L + D H ++ + ++++ ++ NK+ID T PW L KE+ + +L V
Sbjct: 397 LSQVIDAQLADYHKHMEAVDYPRALEAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASV 456
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGI 504
+ LR+ +QP + + + ++ +LG+
Sbjct: 457 MAHLAASLRVVAHVIQPFMMETSAAIMAQLGL 488
>sp|Q8P298|SYM_STRP8 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=metG PE=3 SV=1
Length = 665
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 250/512 (48%), Gaps = 33/512 (6%)
Query: 2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQN 61
K +ITTPI+Y + HIG YT + D R+ +L+ + TG DEHG KIQ
Sbjct: 1 MKKPFYITTPIYYPSGKLHIGSAYTTIACDVLARYKRLMGHEV--FYLTGLDEHGQKIQT 58
Query: 62 AAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIY 121
A + + + + ++ K +++ DI Y ++RTT ++H V V+ KL +D IY
Sbjct: 59 KAKEAGISPQTYVDNMAKDVKALWQLLDISYDTFIRTTDDYHEEVVAAVFEKLLAQDDIY 118
Query: 122 PNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWV 181
+Y GWY VS+E F E Q++ ++E+ + I P S VEWV
Sbjct: 119 LGEYSGWYSVSDEEFFTESQLKEVFRDEDGQVI--GGIAP------------SGHEVEWV 164
Query: 182 EEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQL-RNMCSEIENDISVSRPKARVHWG 240
E++Y +LS Y + + + + D ++P N++ +N D++VSR WG
Sbjct: 165 SEESYFLRLSKYADRLVAFFKERPDFIQPDGRMNEMVKNFIEPGLEDLAVSR--TTFTWG 222
Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPDFH------TWPPHI-QILGKDILKFHGIYWP 293
+PVP D +YVW+DAL+NY T GY + W + ++GKDIL+FH IYWP
Sbjct: 223 VPVPSDPKHVVYVWIDALLNYATALGYGQANHANFDKFWNGTVFHMVGKDILRFHSIYWP 282
Query: 294 AFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNH 353
L+ L P + H + + KMSKS GNVV P + F LRY+L+R
Sbjct: 283 ILLMMLDLPMPDRLIAHGWFVMKDGKMSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVG 342
Query: 354 SDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTE 413
SD ++ +N ELAN LGNLLNR ++ +N + + +
Sbjct: 343 SDGTFTPEDYVGRINYELANDLGNLLNRTVAM------INKYFDGTVPAYVDNGTAFDAD 396
Query: 414 LIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE-ELNLV 472
L + D H ++ + ++++ ++ NK+ID T PW L KE+ + +L V
Sbjct: 397 LSQLIDAQLADYHKHMEAVDYPRALEAVWTIIARTNKYIDETAPWVLAKEDGDKAQLASV 456
Query: 473 LGVTFEVLRICGIGLQPIVPKLADKLLTRLGI 504
+ LR+ +QP + + + ++ +LG+
Sbjct: 457 MAHLAASLRVVAHVIQPFMMETSAAIMAQLGL 488
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,993,927
Number of Sequences: 539616
Number of extensions: 8935652
Number of successful extensions: 28471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 899
Number of HSP's that attempted gapping in prelim test: 24503
Number of HSP's gapped (non-prelim): 2695
length of query: 528
length of database: 191,569,459
effective HSP length: 122
effective length of query: 406
effective length of database: 125,736,307
effective search space: 51048940642
effective search space used: 51048940642
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)