RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4050
(472 letters)
>1fkm_A Protein (GYP1P), ORF YOR070C; GAP, YPT/RAB protein, vesicular
trafficking, endocytosis, hydrolase, GTPase activation;
1.90A {Saccharomyces cerevisiae} SCOP: a.69.2.1 a.69.2.1
PDB: 2g77_A*
Length = 396
Score = 221 bits (565), Expect = 5e-68
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 177 REAHWEVVERLLFLYAKMNPGQGYVQGMNEIIGPIYYTFATDPV---------------- 220
++ ++R+L+L+A +P GYVQG+N+++ P + TF T+ +
Sbjct: 106 FKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTY 165
Query: 221 --LDNREHAEADCFFVFTNLMGEIRDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEK 278
+ EAD F+ T L+ +I D +I + GI R + L+Q +K+ D +++
Sbjct: 166 MVDEQITDLEADTFWCLTKLLEQITDNYI----HGQPGILRQVKNLSQLVKRIDADLYNH 221
Query: 279 LYAIELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSLFADELRFSFLNHICCAMILLVRED 338
+ ++FRW+ LL +EF + V+R+WD+ ++ + ++ + +
Sbjct: 222 FQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDIKPPVT 281
Query: 339 ILAGDFPSIVKLLQHYPSSVDIPTVISKAVELAGREKVHHISLYPKKLITHCALSLLCLP 398
S V + + S + ++ + K+ SL
Sbjct: 282 PTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSLNE--------------- 326
Query: 399 VYTAVYYTGDLIADELRFSFLNHICCAMILLVREDILAGDFPSIVKLLQHYPSS----VD 454
F +C A ++ + ++ DF + LQ+ P+ D
Sbjct: 327 -------------------FHVFVCAAFLIKWSDQLMEMDFQETITFLQNPPTKDWTETD 367
Query: 455 IPTVISKAVEL 465
I ++S+A
Sbjct: 368 IEMLLSEAFIW 378
Score = 47.3 bits (112), Expect = 7e-06
Identities = 3/63 (4%), Positives = 18/63 (28%)
Query: 409 LIADELRFSFLNHICCAMILLVREDILAGDFPSIVKLLQHYPSSVDIPTVISKAVELAGR 468
+++ + ++ + + S V + + S + ++ +
Sbjct: 257 YLSETSQEVTSSYSMSSNDIKPPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDS 316
Query: 469 ELL 471
+
Sbjct: 317 GKM 319
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator,
structural genomics, structural genomics consortium,
SGC, hydrolase activator; 2.10A {Homo sapiens} PDB:
3dzx_A
Length = 345
Score = 192 bits (488), Expect = 3e-57
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 24/209 (11%)
Query: 182 EVVERLLFLYAKMNPGQGYVQGMNEIIGPIYYTFATDPV--------------LDNREHA 227
E+ ER+LF++A +P GYVQG+N+++ P + F + + + +
Sbjct: 128 EIFERILFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNI 187
Query: 228 EADCFFVFTNLMGEIRDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQ 287
EAD ++ + L+ I+D + + GI + L + + + D +V L E+
Sbjct: 188 EADTYWCMSKLLDGIQDNYTF----AQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYL 243
Query: 288 YYSFRWLTLLLSQEFPLPDVLRIWDSLFADELRFS-FLNHICCAMILLVREDIL-AGDFP 345
++FRW+ LL +E PL +R+WD+ ++ FS F ++C A ++ R++IL DF
Sbjct: 244 QFAFRWMNNLLMREVPLRCTIRLWDTYQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQ 303
Query: 346 SIVKLLQHYPSS----VDIPTVISKAVEL 370
++ LQ+ P++ DI ++++A L
Sbjct: 304 ELLLFLQNLPTAHWDDEDISLLLAEAYRL 332
Score = 45.3 bits (107), Expect = 2e-05
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 409 LIADELRFS-FLNHICCAMILLVREDIL-AGDFPSIVKLLQHYPSS----VDIPTVISKA 462
++ FS F ++C A ++ R++IL DF ++ LQ+ P++ DI ++++A
Sbjct: 270 YQSEPDGFSHFHLYVCAAFLVRWRKEILEEKDFQELLLFLQNLPTAHWDDEDISLLLAEA 329
Query: 463 VEL 465
L
Sbjct: 330 YRL 332
>3qwl_A TBC1 domain family member 7; RAB GTPase activation, structural
genomics consortium, TBC D SGC, hydrolase activator;
1.90A {Homo sapiens}
Length = 294
Score = 115 bits (289), Expect = 2e-29
Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 11/144 (7%)
Query: 228 EADCFFVFTNLMGEIRDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQ 287
DC+++ + ++ + + +L Q + +D + L P+
Sbjct: 149 SVDCYWITRRFVNQLNTKYRD-------SLPQLPKAFEQYLNLEDGRLLTHLRMCSAAPK 201
Query: 288 YYSFRWLTLLLSQEFPLPDVLRIWDSLFADELRFSFLNHICCAMILLVREDILA-GDFPS 346
W + P + R+WD + + + L + ++L + ++A
Sbjct: 202 LPYDLWFKRCFAGCLPESSLQRVWDKVVSGSCK--ILVFVAVEILLTFKIKVMALNSAEK 259
Query: 347 IVKLLQHYPSSVDIPTVISKAVEL 370
I K L++ P ++SKA++L
Sbjct: 260 ITKFLENIP-QDSSDAIVSKAIDL 282
Score = 41.6 bits (97), Expect = 3e-04
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 417 SFLNHICCAMILLVREDILA-GDFPSIVKLLQHYPSSVDIPTVISKAVEL 465
L + ++L + ++A I K L++ P ++SKA++L
Sbjct: 234 KILVFVAVEILLTFKIKVMALNSAEKITKFLENIP-QDSSDAIVSKAIDL 282
>2qq8_A TBC1 domain family member 14; structural genomics consortium,
RAB-GAP, SGC, GTPase activation, hydrolase activator;
2.00A {Homo sapiens}
Length = 334
Score = 94.9 bits (236), Expect = 1e-21
Identities = 38/197 (19%), Positives = 65/197 (32%), Gaps = 23/197 (11%)
Query: 186 RLLFLYAKMNPGQGYVQGMNEIIGP--IYYTFATDPVLDNREHAEADCFFVFTNLMGEI- 242
+L Y P GYVQGM+ I + AD F F+NL+ +
Sbjct: 139 SILGAYTCYRPDVGYVQGMSFIAAVLILNLD-------------TADAFIAFSNLLNKPC 185
Query: 243 -RDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQYYSFRWLTLLLSQE 301
FF + + ++ +++ L P Y W+ L S+
Sbjct: 186 QMAFFRVDH----GLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKS 241
Query: 302 FPLPDVLRIWDSLFADELRFSFLNHICCAMILLVREDILAGDFPSIVKLLQHYPSSVDIP 361
PL RIWD D F F ++ L + + DF + + L P +
Sbjct: 242 LPLDLACRIWDVFCRDGEEFLF--RTALGILKLFEDILTKMDFIHMAQFLTRLPEDLPAE 299
Query: 362 TVISKAVELAGREKVHH 378
+ + + + +
Sbjct: 300 ELFASIATIQMQSRNKK 316
Score = 30.9 bits (70), Expect = 0.87
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 124 RLLFLYAKMNPGQGYVQGMNEIIGP 148
+L Y P GYVQGM+ I
Sbjct: 139 SILGAYTCYRPDVGYVQGMSFIAAV 163
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase
activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Length = 331
Score = 87.5 bits (217), Expect = 3e-19
Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 29/201 (14%)
Query: 186 RLLFLYAKMNPGQGYVQGMNEIIGP--IYYTFATDPVLDNREHAEADCFFVFTNLMGEI- 242
+L Y+ ++ GY QG++ + G ++ + E + F + LM ++
Sbjct: 134 NILKAYSLLDQEVGYCQGLSFVAGILLLHMS-------------EEEAFKMLKFLMFDMG 180
Query: 243 -RDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQYYSFRW-LTLLLSQ 300
R + + + M +L++ + +++ L E+ P Y+ W LT+ SQ
Sbjct: 181 LRKQYRPDM----IILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQ 236
Query: 301 EFPLPDVLRIWDSLFADELRFSFLNHICCAMILLVREDILAG-DFPSIVKLLQHYPSS-- 357
FPL V R++D +F + + +++ + IL + +IV ++ +
Sbjct: 237 -FPLGFVARVFDMIFLQGTE--VIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLG 293
Query: 358 -VDIPTVISKAVELAGREKVH 377
V + I++ E+ +++
Sbjct: 294 LVQMEKTINQVFEMDIAKQLQ 314
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics
consortium, SGC, alternative splicing, GTPase
activation, phosphoprotein; 2.30A {Homo sapiens}
Length = 310
Score = 82.8 bits (205), Expect = 9e-18
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 30/195 (15%)
Query: 186 RLLFLYAKMNPGQGYVQGMNEIIGP--IYYTFATDPVLDNREHAEADCFFVFTNLMGEI- 242
++ Y+ + GY QG + + ++ E F V +M +
Sbjct: 100 KICKAYSVYDEDIGYCQGQSFLAAVLLLHMP-------------EEQAFCVLVKIMYDYG 146
Query: 243 -RDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQYYSFRW-LTLLLSQ 300
RD + + ++ +L + M+++ ++ + L Y+ +W LTL ++
Sbjct: 147 LRDLYRNNF----EDLHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAK 202
Query: 301 EFPLPDVLRIWDSLFADELRFSFLNHICCAMILLVREDILAGDFPSIVKLLQH-----YP 355
FPL V I D L + L F H+ A++ +ED+L DF +K + Y
Sbjct: 203 -FPLCMVFHIIDLLLCEGLNIIF--HVALALLKTSKEDLLQADFEGALKFFRVQLPKRYR 259
Query: 356 SSVDIPTVISKAVEL 370
+ + ++ +A +
Sbjct: 260 AEENARRLMEQACNI 274
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 62.2 bits (150), Expect = 2e-10
Identities = 57/378 (15%), Positives = 122/378 (32%), Gaps = 90/378 (23%)
Query: 124 RLLFLYAKMNPGQGYVQGMNEIIGPIYYTFAT-------DPVLE--------NRVRKAAE 168
LF + + + E++ Y + P + +R+ +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124
Query: 169 DYAPLEEGR-EAHWEVVERLLFLYAKMNPGQG-YVQGMNEIIGPIYYTFATDPVLDNREH 226
+A R + + ++ + LL ++ P + + G+ +G A D L +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALL----ELRPAKNVLIDGV---LGSGKTWVALDVCLSYKVQ 177
Query: 227 AEADCFFVFTNLMGEIRDFFIK-SLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELH 285
C F +I F++ + + ++ KL + + I+L
Sbjct: 178 ----CKMDF-----KI--FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226
Query: 286 PQYYSFRWLTLLLSQEFP--LPDVLR-IWDSLFADELRFSFLNHICCAMILLVRE----D 338
LL S+ + L VL + ++ + S C ++L R D
Sbjct: 227 IHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAWNAFNLS------CKILLTTRFKQVTD 279
Query: 339 ILAGDFPSIVKLLQHYPS-----SVDIPTVISKAVELAG---REKVHHISLYPKKLITHC 390
L+ + + L H + + + K ++ +V + P+
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSL---LLKYLDCRPQDLPREVLTTN--PR------ 328
Query: 391 ALSLLCLPVYTAVYYTGDLIADEL-RFSFLNHICCAMILLVREDILAGDFPSIVKLLQHY 449
LS++ + I D L + H+ C + + E L P+ + + +
Sbjct: 329 RLSII-----------AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR--KMF 375
Query: 450 ------PSSVDIPT-VIS 460
P S IPT ++S
Sbjct: 376 DRLSVFPPSAHIPTILLS 393
Score = 33.3 bits (75), Expect = 0.21
Identities = 61/421 (14%), Positives = 126/421 (29%), Gaps = 144/421 (34%)
Query: 1 MKRLCPEI-SFFQQAAEYPCKA-VVTSGGRKRLHRRVTHSTLSSA-----NVQRRGLGVT 53
+++L +I + +++ + + L R + + NVQ
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK---A 258
Query: 54 KQAAEYPCKAVVTS---------GGRKRLHRRVTHSTLS-----SANVQRRGLGVTKIAL 99
A CK ++T+ H + H +++ ++ + L L
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 100 VVRKAAEDYAPL------EEGRE--AHWEVVERLLFLYAKMNPGQGYVQGMNEIIG---- 147
+ P E R+ A W+ + +N + + II
Sbjct: 319 --PREVLTTNPRRLSIIAESIRDGLATWD-------NWKHVNCDK-----LTTIIESSLN 364
Query: 148 --------PIYYTFA--------TDPVLE-------------------NR--VRKAAEDY 170
++ + +L V K ++
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 171 ------------APLEEGREAHWEVVERLLFLYAKMNPGQGYVQGMNEIIGPI----YYT 214
LE H +V+ Y N + + +++I P +Y+
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDH----Y---NIPKTFDS--DDLIPPYLDQYFYS 475
Query: 215 FATDPVL----DNREHAEADCFF--VFTNLMGEIRDFFIKSLDETESGINRLMSKLNQTM 268
+ N EH E F VF + F + + + N S LN T+
Sbjct: 476 H-----IGHHLKNIEHPERMTLFRMVFLDF-----RFLEQKIRHDSTAWNASGSILN-TL 524
Query: 269 KQKDLEVWEKLYAIELHPQYYSFRWLTLLLSQEFPLP----DVLRIWDSLFADELRFSFL 324
+ L+ ++ Y + P+Y R + +L +F LP +++ S + D LR + +
Sbjct: 525 --QQLKFYKP-YICDNDPKYE--RLVNAIL--DF-LPKIEENLIC---SKYTDLLRIALM 573
Query: 325 N 325
Sbjct: 574 A 574
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 44.7 bits (105), Expect = 7e-05
Identities = 73/428 (17%), Positives = 126/428 (29%), Gaps = 148/428 (34%)
Query: 74 HRRVTHSTLSSANV-----QRRGLGVTKIALVVRKAAEDYAPLEEGREAHWEVVERLL-F 127
H + H L Q + + A D P E+V + L +
Sbjct: 13 HGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA-----ELVGKFLGY 67
Query: 128 LYAKMNPGQGYVQGMNEIIGPIYYTFATDPVLENRVRKAAEDYAPLEEGREAHWEVVERL 187
+ + + P + G D VL + + Y LE G + H + +L
Sbjct: 68 VSSLVEPSK---VG------------QFDQVLNLCLTEFENCY--LE-GNDIH-ALAAKL 108
Query: 188 LFLYAKMNPGQGYVQGMNEIIGPIYYT---FATDPVLDNREHA--------EADCFFVFT 236
L + E+I Y T A P A A +F
Sbjct: 109 L------QENDTTLVKTKELI-KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIF- 160
Query: 237 NLMG----------EIRDFFIKSLDET-ESGINRLMSKLNQTMKQ--KDLEVWEKLYAIE 283
G E+RD + +T + L+ +T+ + + EK++
Sbjct: 161 ---GGQGNTDDYFEELRDLY-----QTYHVLVGDLIKFSAETLSELIRTTLDAEKVF--- 209
Query: 284 LHPQYYSF-RWLTLLLSQEFPLPDVLRIWDSLFADELRFSFLNHICCAMILLVREDILAG 342
Q + WL PD +L I +
Sbjct: 210 --TQGLNILEWLE----NPSNTPDK--------------DYLLSIPIS------------ 237
Query: 343 DFPSIVKLLQ--HYPSSVDIPTVISKAVELAGREKVHHISLYPKKLITH-CALSLLCLPV 399
P I ++Q HY V +K + P +L ++ + +
Sbjct: 238 -CPLIG-VIQLAHY-------VVTAKLLGFT-----------PGELRSYLKGATGHSQGL 277
Query: 400 YTAVYYTGDLIA--DELRFSFLNHICCAMILLVREDILAGDFPSI-VKLLQHYPSSVDIP 456
TAV IA D SF + A+ +L F I V+ + YP++ P
Sbjct: 278 VTAV-----AIAETDSWE-SFFVSVRKAITVL---------F-FIGVRCYEAYPNTSLPP 321
Query: 457 TVISKAVE 464
+++ ++E
Sbjct: 322 SILEDSLE 329
Score = 28.9 bits (64), Expect = 4.8
Identities = 11/88 (12%), Positives = 23/88 (26%), Gaps = 22/88 (25%)
Query: 37 HSTLSSANVQRRGLGVTK----QAAEYPC---KAVVTS---------GGRKRLHRRVTHS 80
+ T ++++ +++ P GG L
Sbjct: 460 YDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGL------G 513
Query: 81 TLSSANVQRRGLGVTKIALVVRKAAEDY 108
L+ N G+ V + +DY
Sbjct: 514 VLTHRNKDGTGVRVIVAGTLDINPDDDY 541
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.5 bits (70), Expect = 0.29
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 159 LENRVRKAAEDYAP 172
L+ ++ A+D AP
Sbjct: 25 LQASLKLYADDSAP 38
Score = 31.1 bits (69), Expect = 0.39
Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Query: 269 KQ--KDLEVWEKLYAIELHP 286
KQ K L+ KLYA + P
Sbjct: 19 KQALKKLQASLKLYADDSAP 38
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family
M20/M25/M structural genomics, joint center for
structural genomics; 2.04A {Bacillus cereus atcc 10987}
Length = 373
Score = 29.6 bits (67), Expect = 2.5
Identities = 6/57 (10%), Positives = 17/57 (29%), Gaps = 8/57 (14%)
Query: 236 TNLMGEIRDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQYYSFR 292
+ E R + ++ + + + M +E++ Y F+
Sbjct: 244 VQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGH--------ADVEVNVMYPGFK 292
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics,
joint CEN structural genomics, JCSG, protein structure
initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus
aureus subsp}
Length = 396
Score = 29.2 bits (66), Expect = 3.3
Identities = 6/57 (10%), Positives = 14/57 (24%), Gaps = 8/57 (14%)
Query: 236 TNLMGEIRDFFIKSLDETESGINRLMSKLNQTMKQKDLEVWEKLYAIELHPQYYSFR 292
L E R + + + + + K + + Y F+
Sbjct: 264 VILEAEARSHDPERIKTQVKHMTDVFETTASELGGK--------AEVTVEQSYPGFK 312
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, tetratricopeptide repeat domain;
HET: PGE; 1.85A {Caenorhabditis elegans}
Length = 127
Score = 27.2 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 265 NQTMKQKDLEVWEKLY--AIELHPQYYSF 291
N KQKD E Y AIEL P +F
Sbjct: 16 NAAYKQKDFEKAHVHYDKAIELDPSNITF 44
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.417
Gapped
Lambda K H
0.267 0.0744 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 7,548,564
Number of extensions: 476815
Number of successful extensions: 955
Number of sequences better than 10.0: 1
Number of HSP's gapped: 935
Number of HSP's successfully gapped: 33
Length of query: 472
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 375
Effective length of database: 3,993,456
Effective search space: 1497546000
Effective search space used: 1497546000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (26.5 bits)