BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4053
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CJ19|MICA3_MOUSE Protein-methionine sulfoxide oxidase MICAL3 OS=Mus musculus
GN=Mical3 PE=1 SV=2
Length = 1993
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>sp|Q7RTP6|MICA3_HUMAN Protein-methionine sulfoxide oxidase MICAL3 OS=Homo sapiens
GN=MICAL3 PE=1 SV=2
Length = 2002
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>sp|G3MWR8|MICA3_BOVIN Protein-methionine sulfoxide oxidase MICAL3 OS=Bos taurus GN=MICAL3
PE=3 SV=1
Length = 1960
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFRGLVEPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>sp|F1MF74|MICA2_BOVIN Protein-methionine sulfoxide oxidase MICAL2 OS=Bos taurus GN=MICAL2
PE=3 SV=2
Length = 1101
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 3 IEYVVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADG 62
I + V + GVEIH V F +L PP +Q+ +KIGWRA P DH +S++EF+V++GADG
Sbjct: 165 ILFKVALILGVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPVDHSLSEFEFDVIIGADG 224
Query: 63 KRNTLEGFK 71
+RNTLEGF+
Sbjct: 225 RRNTLEGFR 233
>sp|O94851|MICA2_HUMAN Protein-methionine sulfoxide oxidase MICAL2 OS=Homo sapiens
GN=MICAL2 PE=1 SV=1
Length = 1124
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F +L PP +Q+ +KIGWRA P DH +S++EF+V++GADG+RNTLEGF+
Sbjct: 174 GVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPTDHSLSEFEFDVIIGADGRRNTLEGFR 233
>sp|F1QWK4|MCA3B_DANRE Protein-methionine sulfoxide oxidase mical3b OS=Danio rerio
GN=mical3b PE=2 SV=2
Length = 1673
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H V F+ LL PP NQ E+++GWRA V P HPV Q EF+V++GADG+RNTL GF+
Sbjct: 173 GVEVHVNVEFKHLLEPPENQ-EKRVGWRAEVQPSSHPVRQLEFDVVIGADGRRNTLPGFR 231
>sp|F1QH17|MCA3A_DANRE Protein-methionine sulfoxide oxidase mical3a OS=Danio rerio
GN=mical3a PE=2 SV=2
Length = 1994
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA V P HPV++ EF+V++GADG+RNTL GF+
Sbjct: 178 GIEIHVNVEFKGLIEPPEDQENERIGWRAEVHPRTHPVNELEFDVIIGADGRRNTLSGFR 237
>sp|Q8BML1|MICA2_MOUSE Protein-methionine sulfoxide oxidase MICAL2 OS=Mus musculus
GN=Mical2 PE=1 SV=1
Length = 960
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H V F +L PP +Q+ +K+GWRA P DH +S +EF+V++GADG RNTLEGF+
Sbjct: 174 GVEVHVNVEFVRVLEPPEDQENQKVGWRAEFLPADHALSDFEFDVIIGADGHRNTLEGFR 233
>sp|D4A1F2|MICA2_RAT Protein-methionine sulfoxide oxidase MICAL2 OS=Rattus norvegicus
GN=Mical2 PE=2 SV=1
Length = 961
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F + PP +Q+ KIGWRA P DH +S +EF+V++GADG RNTLEGF+
Sbjct: 174 GVEIHVNVEFVRVREPPKDQENRKIGWRAEFLPADHALSNFEFDVIIGADGHRNTLEGFR 233
>sp|Q86BA1|MICAL_DROME Protein-methionine sulfoxide oxidase Mical OS=Drosophila
melanogaster GN=Mical PE=1 SV=1
Length = 4723
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68
GVEIHEGV F+ + P + GWRA V+P DHPVS YEF+VL+GADGKRN L+
Sbjct: 215 GVEIHEGVSFDHAVEPSGDGG----GWRAAVTPADHPVSHYEFDVLIGADGKRNMLD 267
>sp|E7F9T0|MICA1_DANRE Protein-methionine sulfoxide oxidase mical1 OS=Danio rerio
GN=mical1 PE=3 SV=1
Length = 1214
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H GV FE L P + GWRA VSP HPV+ ++F+V + A G + +GFK
Sbjct: 173 GVEVHTGVAFEGLNEPSGS-----AGWRANVSPKSHPVADFQFDVFISAGGGKYVPDGFK 227
>sp|Q8TDZ2|MICA1_HUMAN Protein-methionine sulfoxide oxidase MICAL1 OS=Homo sapiens
GN=MICAL1 PE=1 SV=2
Length = 1067
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGVTFTGLQPPPRKGS----GWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGF 227
Query: 71 K 71
K
Sbjct: 228 K 228
>sp|F1MH07|MICA1_BOVIN Protein-methionine sulfoxide oxidase MICAL1 OS=Bos taurus GN=MICAL1
PE=2 SV=1
Length = 1070
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH G+ F L PPP ++ GWRA + P P +++YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGITFTGLQPPP----KKGSGWRAQLQPSPPAQLAKYEFDVLISAAGGKFVPEGF 227
>sp|Q8VDP3|MICA1_MOUSE Protein-methionine sulfoxide oxidase MICAL1 OS=Mus musculus
GN=Mical1 PE=1 SV=1
Length = 1048
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGVKFTGLQPPPRKGS----GWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 227
>sp|D3ZBP4|MICA1_RAT Protein-methionine sulfoxide oxidase MICAL1 OS=Rattus norvegicus
GN=Mical1 PE=2 SV=1
Length = 1047
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH G F L PPP ++ GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGFTFTGLQPPP----KKGSGWRARIQPSPPAQLASYEFDVLISAGGGKFVPEGF 227
>sp|Q9JHB5|TSNAX_RAT Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1
SV=1
Length = 290
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 20 GFESLLPPPSNQDEEKIGWRAVVSPPDH 47
G ES PP QD++ + WR ++P D+
Sbjct: 160 GKESKAPPADGQDKQLVTWRLKITPVDY 187
>sp|A2Q9N7|KMO1_ASPNC Kynurenine 3-monooxygenase 1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=bna4-1 PE=3 SV=1
Length = 475
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 42 VSPPDHPVSQYEFNVLVGADGKRNTLEGFKS 72
+S P P + +F++L+GADG +T F S
Sbjct: 155 ISRPQEPSHETKFDLLIGADGAHSTTRFFLS 185
>sp|F6QZ15|MICA2_XENTR Protein-methionine sulfoxide oxidase mical2 OS=Xenopus tropicalis
GN=mical2 PE=3 SV=1
Length = 1126
Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 10 VHGVEIHEGVGFESLLPPPSNQDEEKI 36
+HG+EIH V F LL P +Q+ + I
Sbjct: 172 LHGIEIHVNVEFMKLLEPLEDQENQNI 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,061,651
Number of Sequences: 539616
Number of extensions: 1169809
Number of successful extensions: 1689
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1668
Number of HSP's gapped (non-prelim): 19
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)