Query psy4053
Match_columns 74
No_of_seqs 86 out of 88
Neff 3.9
Searched_HMMs 29240
Date Sat Aug 17 00:10:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bry_A NEDD9 interacting prote 96.0 0.0045 1.5E-07 46.7 3.3 57 11-71 179-236 (497)
2 4hb9_A Similarities with proba 95.4 0.0084 2.9E-07 41.5 2.7 46 12-67 123-168 (412)
3 2qa2_A CABE, polyketide oxygen 95.3 0.018 6.1E-07 43.4 4.2 49 11-67 120-168 (499)
4 2x3n_A Probable FAD-dependent 95.2 0.024 8.2E-07 40.1 4.6 45 12-67 122-168 (399)
5 2vou_A 2,6-dihydroxypyridine h 95.2 0.011 3.8E-07 42.1 2.7 46 11-67 110-155 (397)
6 1k0i_A P-hydroxybenzoate hydro 95.1 0.017 5.7E-07 40.7 3.4 50 11-67 116-165 (394)
7 3ihg_A RDME; flavoenzyme, anth 95.0 0.0029 9.8E-08 47.3 -0.9 56 8-67 130-185 (535)
8 2qa1_A PGAE, polyketide oxygen 95.0 0.0027 9.1E-08 48.0 -1.1 50 10-67 118-167 (500)
9 3rp8_A Flavoprotein monooxygen 94.6 0.028 9.5E-07 40.0 3.5 44 13-67 140-183 (407)
10 2xdo_A TETX2 protein; tetracyc 94.1 0.054 1.9E-06 38.6 4.1 45 12-67 140-184 (398)
11 3fmw_A Oxygenase; mithramycin, 93.9 0.027 9.3E-07 43.5 2.4 49 11-67 161-209 (570)
12 3nix_A Flavoprotein/dehydrogen 93.9 0.035 1.2E-06 39.2 2.7 50 11-67 119-168 (421)
13 3c96_A Flavin-containing monoo 93.9 0.022 7.6E-07 40.7 1.7 49 11-67 121-171 (410)
14 3oz2_A Digeranylgeranylglycero 92.7 0.013 4.3E-07 40.1 -1.1 56 5-67 109-164 (397)
15 3e1t_A Halogenase; flavoprotei 92.5 0.12 4E-06 38.7 3.8 52 11-68 124-175 (512)
16 3alj_A 2-methyl-3-hydroxypyrid 92.4 0.11 3.6E-06 36.7 3.3 43 11-67 120-162 (379)
17 2dkh_A 3-hydroxybenzoate hydro 91.6 0.022 7.5E-07 44.2 -1.0 57 8-67 151-213 (639)
18 1pn0_A Phenol 2-monooxygenase; 90.5 0.034 1.1E-06 43.7 -1.0 17 51-67 216-232 (665)
19 3cgv_A Geranylgeranyl reductas 90.2 0.17 5.6E-06 35.1 2.5 49 11-67 115-164 (397)
20 3atr_A Conserved archaeal prot 89.4 0.15 5.3E-06 37.1 1.9 52 11-67 113-164 (453)
21 2r0c_A REBC; flavin adenine di 88.5 0.45 1.5E-05 36.0 3.9 46 15-67 152-198 (549)
22 2weu_A Tryptophan 5-halogenase 86.7 0.46 1.6E-05 34.9 3.0 48 8-67 183-232 (511)
23 3v76_A Flavoprotein; structura 86.2 0.65 2.2E-05 34.4 3.6 45 11-67 145-189 (417)
24 2ywl_A Thioredoxin reductase r 85.4 1.2 4E-05 27.9 4.1 43 11-66 69-111 (180)
25 3c4a_A Probable tryptophan hyd 85.0 0.2 6.8E-06 35.5 0.3 34 11-66 111-144 (381)
26 3i3l_A Alkylhalidase CMLS; fla 84.4 0.48 1.6E-05 36.9 2.2 51 10-67 140-190 (591)
27 2pyx_A Tryptophan halogenase; 83.3 0.81 2.8E-05 34.2 3.0 47 11-67 189-235 (526)
28 2e4g_A Tryptophan halogenase; 82.5 1 3.4E-05 34.0 3.3 46 10-67 206-254 (550)
29 2aqj_A Tryptophan halogenase, 82.2 0.83 2.8E-05 34.1 2.7 48 10-67 177-224 (538)
30 1fl2_A Alkyl hydroperoxide red 78.3 6.6 0.00023 26.1 5.9 49 11-67 69-117 (310)
31 3ig5_A Glutamate-cysteine liga 77.2 1.4 4.9E-05 36.6 2.8 29 25-53 451-482 (692)
32 1vdc_A NTR, NADPH dependent th 73.9 3.9 0.00013 27.5 3.9 47 11-70 83-129 (333)
33 4a9w_A Monooxygenase; baeyer-v 73.5 3 0.0001 27.8 3.2 44 11-66 89-133 (357)
34 2gmh_A Electron transfer flavo 73.3 2.9 0.0001 32.1 3.5 52 11-67 157-219 (584)
35 3dme_A Conserved exported prot 72.4 4.9 0.00017 27.0 4.1 50 8-65 160-209 (369)
36 2gqf_A Hypothetical protein HI 71.1 4.7 0.00016 29.4 4.0 48 11-66 122-169 (401)
37 1yvv_A Amine oxidase, flavin-c 70.7 4.5 0.00015 27.2 3.6 45 12-67 119-164 (336)
38 1ryi_A Glycine oxidase; flavop 67.6 5.3 0.00018 27.4 3.5 44 11-66 177-220 (382)
39 2gf3_A MSOX, monomeric sarcosi 66.9 6 0.00021 27.1 3.6 44 10-65 162-205 (389)
40 1qo8_A Flavocytochrome C3 fuma 65.1 1.8 6E-05 32.8 0.7 56 6-66 258-313 (566)
41 2oln_A NIKD protein; flavoprot 62.7 8.5 0.00029 26.8 3.8 45 8-64 163-207 (397)
42 2i0z_A NAD(FAD)-utilizing dehy 62.2 6.2 0.00021 28.7 3.1 46 11-66 147-192 (447)
43 2uzz_A N-methyl-L-tryptophan o 62.0 2.5 8.5E-05 29.0 0.9 46 8-65 159-204 (372)
44 2nvn_A Hypothetical protein; s 61.5 4 0.00014 27.3 1.8 23 35-62 9-31 (122)
45 1rp0_A ARA6, thiazole biosynth 61.4 19 0.00065 24.4 5.4 54 11-68 133-194 (284)
46 2gv8_A Monooxygenase; FMO, FAD 61.2 4.8 0.00016 29.1 2.4 48 12-66 129-178 (447)
47 2it9_A Hypothetical protein; s 60.0 4.4 0.00015 27.2 1.8 23 35-62 7-29 (127)
48 3d1c_A Flavin-containing putat 59.7 20 0.00068 24.3 5.2 44 11-66 101-144 (369)
49 2q0l_A TRXR, thioredoxin reduc 59.4 14 0.00047 24.5 4.2 48 11-70 72-119 (311)
50 1hyu_A AHPF, alkyl hydroperoxi 58.1 25 0.00086 26.3 5.9 49 11-67 280-328 (521)
51 3nyc_A D-arginine dehydrogenas 58.1 5.6 0.00019 27.0 2.1 46 8-65 164-209 (381)
52 1w4x_A Phenylacetone monooxyge 57.3 9.2 0.00032 28.7 3.4 45 12-65 110-154 (542)
53 1y0p_A Fumarate reductase flav 56.1 10 0.00035 28.5 3.5 53 8-65 265-317 (571)
54 3axb_A Putative oxidoreductase 52.4 28 0.00097 24.6 5.2 49 10-65 193-254 (448)
55 3lzw_A Ferredoxin--NADP reduct 51.9 24 0.00081 23.3 4.4 43 11-64 80-122 (332)
56 3itj_A Thioredoxin reductase 1 51.9 37 0.0013 22.4 5.4 50 11-69 97-146 (338)
57 3ab1_A Ferredoxin--NADP reduct 51.8 35 0.0012 23.3 5.4 45 11-65 87-131 (360)
58 2qae_A Lipoamide, dihydrolipoy 51.4 14 0.00048 26.8 3.5 51 11-68 229-279 (468)
59 2zbw_A Thioredoxin reductase; 51.3 21 0.00072 23.9 4.1 43 11-64 78-120 (335)
60 2xve_A Flavin-containing monoo 50.8 10 0.00036 27.9 2.7 47 12-63 115-164 (464)
61 3s5w_A L-ornithine 5-monooxyge 50.2 10 0.00035 27.1 2.6 49 11-66 329-378 (463)
62 3ps9_A TRNA 5-methylaminomethy 49.0 15 0.00052 28.2 3.5 46 10-66 429-474 (676)
63 3urh_A Dihydrolipoyl dehydroge 48.9 16 0.00056 26.7 3.5 51 11-68 252-303 (491)
64 2v3a_A Rubredoxin reductase; a 47.7 18 0.00061 25.4 3.5 45 11-66 200-244 (384)
65 3qj4_A Renalase; FAD/NAD(P)-bi 47.2 24 0.00083 24.0 4.0 40 12-62 123-162 (342)
66 2gag_B Heterotetrameric sarcos 46.1 29 0.00098 23.8 4.2 45 10-65 186-230 (405)
67 1y56_B Sarcosine oxidase; dehy 44.3 17 0.00057 25.0 2.8 46 8-65 159-205 (382)
68 3r9u_A Thioredoxin reductase; 44.0 36 0.0012 22.2 4.3 47 11-68 75-121 (315)
69 2yqu_A 2-oxoglutarate dehydrog 44.0 22 0.00075 25.6 3.5 46 11-67 221-266 (455)
70 3oc4_A Oxidoreductase, pyridin 43.5 52 0.0018 23.7 5.4 46 11-68 202-247 (452)
71 3pvc_A TRNA 5-methylaminomethy 43.3 27 0.00093 27.0 4.1 46 11-66 425-470 (689)
72 3cty_A Thioredoxin reductase; 43.1 39 0.0013 22.5 4.5 47 11-70 85-131 (319)
73 1d4d_A Flavocytochrome C fumar 43.0 20 0.00068 27.2 3.3 54 8-66 265-318 (572)
74 3c4n_A Uncharacterized protein 42.7 13 0.00044 26.5 2.1 44 10-65 184-236 (405)
75 3fbs_A Oxidoreductase; structu 42.5 53 0.0018 21.1 4.9 28 37-68 88-115 (297)
76 2a87_A TRXR, TR, thioredoxin r 42.1 40 0.0014 22.8 4.4 47 11-70 84-131 (335)
77 1ges_A Glutathione reductase; 41.5 34 0.0012 24.8 4.3 48 11-68 221-268 (450)
78 1trb_A Thioredoxin reductase; 39.6 46 0.0016 21.9 4.4 47 11-70 75-121 (320)
79 2eq6_A Pyruvate dehydrogenase 39.4 32 0.0011 25.1 3.8 51 11-68 223-274 (464)
80 3o0h_A Glutathione reductase; 39.0 30 0.001 25.3 3.6 47 11-68 245-291 (484)
81 1dxl_A Dihydrolipoamide dehydr 38.6 25 0.00085 25.3 3.1 50 11-67 231-281 (470)
82 3dje_A Fructosyl amine: oxygen 37.9 21 0.00072 25.2 2.6 47 8-65 171-221 (438)
83 3nlc_A Uncharacterized protein 37.6 27 0.00091 27.1 3.3 45 11-65 233-277 (549)
84 3lad_A Dihydrolipoamide dehydr 36.7 32 0.0011 24.9 3.4 50 11-68 234-283 (476)
85 3gwf_A Cyclohexanone monooxyge 33.7 48 0.0016 25.2 4.1 41 14-63 105-145 (540)
86 2a8x_A Dihydrolipoyl dehydroge 32.9 40 0.0014 24.3 3.4 49 11-67 225-273 (464)
87 4gcm_A TRXR, thioredoxin reduc 31.0 17 0.00057 24.3 1.1 10 49-58 2-11 (312)
88 2r9z_A Glutathione amide reduc 30.4 46 0.0016 24.3 3.4 48 11-68 220-267 (463)
89 2qcu_A Aerobic glycerol-3-phos 29.6 27 0.00093 25.8 2.1 50 9-65 160-210 (501)
90 4at0_A 3-ketosteroid-delta4-5a 29.5 17 0.00059 26.9 1.0 54 6-65 210-264 (510)
91 1mo9_A ORF3; nucleotide bindin 28.9 39 0.0013 25.1 2.9 51 11-67 268-318 (523)
92 1fec_A Trypanothione reductase 27.7 77 0.0026 23.3 4.3 48 11-68 244-291 (490)
93 1ojt_A Surface protein; redox- 25.8 1E+02 0.0036 22.3 4.6 49 11-66 239-287 (482)
94 3f8d_A Thioredoxin reductase ( 25.3 1E+02 0.0034 20.0 4.1 45 12-68 84-128 (323)
95 3iwa_A FAD-dependent pyridine 25.0 62 0.0021 23.4 3.3 44 11-65 215-258 (472)
96 2cul_A Glucose-inhibited divis 24.2 1E+02 0.0035 20.0 4.0 44 12-66 83-126 (232)
97 2q8k_A Proliferation-associate 23.4 32 0.0011 25.6 1.5 29 37-65 311-339 (401)
98 4ap3_A Steroid monooxygenase; 23.1 83 0.0028 23.9 3.8 41 14-63 117-157 (549)
99 3h3i_A Putative lipid binding 23.0 29 0.00098 23.8 1.1 36 38-73 106-143 (150)
100 1zmd_A Dihydrolipoyl dehydroge 22.9 80 0.0028 22.8 3.5 50 11-67 233-284 (474)
101 1ebd_A E3BD, dihydrolipoamide 22.8 44 0.0015 24.0 2.1 50 11-68 224-273 (455)
102 2wpf_A Trypanothione reductase 22.2 95 0.0033 22.9 3.9 47 11-67 248-294 (495)
103 3ihm_A Styrene monooxygenase A 21.6 28 0.00096 25.1 0.8 15 53-67 155-169 (430)
104 1v59_A Dihydrolipoamide dehydr 21.6 74 0.0025 22.9 3.1 53 11-68 237-290 (478)
105 2hqm_A GR, grase, glutathione 21.5 57 0.0019 23.8 2.5 48 11-66 239-286 (479)
106 1nhp_A NADH peroxidase; oxidor 20.8 98 0.0034 22.1 3.6 45 11-67 204-248 (447)
107 2wdq_A Succinate dehydrogenase 20.7 1.5E+02 0.0052 22.6 4.9 52 10-65 155-206 (588)
108 2vvm_A Monoamine oxidase N; FA 20.5 1.8E+02 0.0061 20.8 4.9 41 13-64 271-311 (495)
109 1ifr_A Lamin A/C; immunoglobul 20.4 57 0.0019 20.8 2.1 48 13-61 12-61 (121)
110 3ntd_A FAD-dependent pyridine 20.3 92 0.0031 22.9 3.4 52 11-66 205-268 (565)
No 1
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.99 E-value=0.0045 Score=46.68 Aligned_cols=57 Identities=47% Similarity=0.858 Sum_probs=43.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCCccccCCcc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGKRNTLEGFK 71 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~rn~l~GF~ 71 (74)
.||+|+.+.+.+++..-..+. .+|.+.+... +.....++.|.||+|||.++.+.++.
T Consensus 179 ~gv~v~~~~~v~~i~~~~~~~----~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQPPPRKG----SGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp TTCEEEESCEEEEEECCCSTT----CCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCCEEEeCCEEEEEEEecCCC----CEEEEEEEECCCCCEEEEEcCEEEECCCCCccccccc
Confidence 589999999999997532222 3699988654 44334588999999999999887653
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.44 E-value=0.0084 Score=41.50 Aligned_cols=46 Identities=24% Similarity=0.255 Sum_probs=33.5
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
+..|+++.++.++.+-.. .++++.+.-. +..+.|+||||||.++++
T Consensus 123 ~~~v~~~~~v~~~~~~~~------~~v~v~~~dG----~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIEN------GGIKIFFADG----SHENVDVLVGADGSNSKV 168 (412)
T ss_dssp TTTEECSCCEEEEEECTT------SCEEEEETTS----CEEEESEEEECCCTTCHH
T ss_pred cceEEEEEEEEeeeEcCC------CeEEEEECCC----CEEEeeEEEECCCCCcch
Confidence 456889999999864222 1577777532 357899999999998864
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.28 E-value=0.018 Score=43.44 Aligned_cols=49 Identities=27% Similarity=0.328 Sum_probs=37.6
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
+|++|+.+.+..++..- + .++++.+.-.+. -..++.|.||||||.++++
T Consensus 120 ~gv~v~~~~~v~~i~~~-~------~~v~v~~~~~~g-~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 120 RGAELLRGHTVRALTDE-G------DHVVVEVEGPDG-PRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp TTCEEEESCEEEEEEEC-S------SCEEEEEECSSC-EEEEEEEEEEECCCTTCHH
T ss_pred CCCEEEcCCEEEEEEEe-C------CEEEEEEEcCCC-cEEEEeCEEEEccCcccHH
Confidence 58999999999999641 1 268888865433 1357899999999999864
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.25 E-value=0.024 Score=40.07 Aligned_cols=45 Identities=20% Similarity=0.147 Sum_probs=34.8
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceee--EEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGW--RAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GW--ra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
||+|+.+.+.+++..- . .+| ++.+.- .. .++.|.||+|||.++.+
T Consensus 122 gv~i~~~~~v~~i~~~-~------~~v~g~v~~~~--g~--~~~ad~vV~AdG~~s~v 168 (399)
T 2x3n_A 122 TVEMLFETRIEAVQRD-E------RHAIDQVRLND--GR--VLRPRVVVGADGIASYV 168 (399)
T ss_dssp TEEEECSCCEEEEEEC-T------TSCEEEEEETT--SC--EEEEEEEEECCCTTCHH
T ss_pred CcEEEcCCEEEEEEEc-C------CceEEEEEECC--CC--EEECCEEEECCCCChHH
Confidence 8999999999999741 1 267 777742 21 68999999999998764
No 5
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.16 E-value=0.011 Score=42.11 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=35.7
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
-|++|+.+.+.+++.+- ..+|++.+.- . ..+++|.||+|||.++.+
T Consensus 110 ~~~~i~~~~~v~~i~~~-------~~~v~v~~~~--g--~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQD-------SETVQMRFSD--G--TKAEANWVIGADGGASVV 155 (397)
T ss_dssp CSTTEETTCCEEEEEEC-------SSCEEEEETT--S--CEEEESEEEECCCTTCHH
T ss_pred CCcEEEcCCEEEEEEec-------CCEEEEEECC--C--CEEECCEEEECCCcchhH
Confidence 38899999999999741 1268888853 2 358999999999998764
No 6
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=95.10 E-value=0.017 Score=40.71 Aligned_cols=50 Identities=12% Similarity=0.012 Sum_probs=36.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.|++|+.+.+.+++..-.. .+|++.+.. +.....++.|.||+|||.++.+
T Consensus 116 ~g~~i~~~~~v~~i~~~~~------~~~~v~~~~-~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 116 CGATTVYQAAEVRLHDLQG------ERPYVTFER-DGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp TTCEEESSCEEEEEECTTS------SSCEEEEEE-TTEEEEEECSEEEECCCTTCST
T ss_pred cCCeEEeceeEEEEEEecC------CceEEEEec-CCcEEEEEeCEEEECCCCCcHH
Confidence 4899999999999974111 257887732 3222357899999999998875
No 7
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.99 E-value=0.0029 Score=47.27 Aligned_cols=56 Identities=30% Similarity=0.390 Sum_probs=40.3
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
|.-+|++|+.+.+.+++..-. ++...||++.+.-.+. -..++.|.||+|||.++.+
T Consensus 130 a~~~gv~i~~~~~v~~i~~~~---~~~~~~v~v~~~~~~~-~~~i~a~~vV~AdG~~S~v 185 (535)
T 3ihg_A 130 ARKHGGAIRFGTRLLSFRQHD---DDAGAGVTARLAGPDG-EYDLRAGYLVGADGNRSLV 185 (535)
T ss_dssp HHHTTCEEESSCEEEEEEEEC---GGGCSEEEEEEEETTE-EEEEEEEEEEECCCTTCHH
T ss_pred HHhCCCEEEeCCEEEEEEECC---CCccccEEEEEEcCCC-eEEEEeCEEEECCCCcchH
Confidence 333599999999999997521 1123378888764433 4567899999999999854
No 8
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.99 E-value=0.0027 Score=47.98 Aligned_cols=50 Identities=28% Similarity=0.353 Sum_probs=37.5
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
-+|++|+.+.+..++..- ..++++.+.-.+. -..++.|.||||||.++++
T Consensus 118 ~~gv~v~~~~~v~~i~~~-------~~~v~v~~~~~~g-~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTDD-------GAGVTVEVRGPEG-KHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp HTTCEEEETCEEEEEEEE-------TTEEEEEEEETTE-EEEEEESEEEECCCTTCHH
T ss_pred HCCCEEECCcEEEEEEEc-------CCeEEEEEEcCCC-CEEEEeCEEEECCCcchHH
Confidence 359999999999999741 1268888764332 1357899999999999864
No 9
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.60 E-value=0.028 Score=39.95 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=34.4
Q ss_pred EEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 13 VEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 13 VeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
++|+.+..++++..-. .+|++.+.-. ..++.|.||+|||.++.+
T Consensus 140 ~~i~~~~~v~~i~~~~-------~~v~v~~~~g----~~~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDA-------DGVTVWFTDG----SSASGDLLIAADGSHSAL 183 (407)
T ss_dssp GGEEESCCEEEEEEET-------TEEEEEETTS----CEEEESEEEECCCTTCSS
T ss_pred CEEEECCEEEEEEecC-------CcEEEEEcCC----CEEeeCEEEECCCcChHH
Confidence 6789999999987421 2798887532 268999999999998875
No 10
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.11 E-value=0.054 Score=38.55 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=34.3
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
+++|+.+.+.+++..-. .+|++.+.-. ..+++|.||+|||.++.+
T Consensus 140 ~~~i~~~~~v~~i~~~~-------~~v~v~~~~g----~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGK-------KKWTLTFENK----PSETADLVILANGGMSKV 184 (398)
T ss_dssp TTSEEESCCEEEEEECS-------SSEEEEETTS----CCEEESEEEECSCTTCSC
T ss_pred CCEEEECCEEEEEEECC-------CEEEEEECCC----cEEecCEEEECCCcchhH
Confidence 35788999999986421 2699888532 268999999999998864
No 11
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.94 E-value=0.027 Score=43.48 Aligned_cols=49 Identities=29% Similarity=0.342 Sum_probs=37.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
+||+|+.+.+.+++..- ..+|++.+.-.+.. ..++.|.||+|||.++++
T Consensus 161 ~gv~i~~~~~v~~l~~~-------~~~v~v~~~~~~G~-~~~~a~~vV~ADG~~S~v 209 (570)
T 3fmw_A 161 AGAEIPRGHEVTRLRQD-------AEAVEVTVAGPSGP-YPVRARYGVGCDGGRSTV 209 (570)
T ss_dssp HTEECCBSCEEEECCBC-------SSCEEEEEEETTEE-EEEEESEEEECSCSSCHH
T ss_pred CCCEEEeCCEEEEEEEc-------CCeEEEEEEeCCCc-EEEEeCEEEEcCCCCchH
Confidence 59999999999998642 12688887522222 468899999999998865
No 12
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.87 E-value=0.035 Score=39.20 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=36.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+...+++..- + .+|.+.+.-.+.....++.|.||+|||.++.+
T Consensus 119 ~gv~i~~~~~v~~i~~~-~------~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l 168 (421)
T 3nix_A 119 QGVDVEYEVGVTDIKFF-G------TDSVTTIEDINGNKREIEARFIIDASGYGRVI 168 (421)
T ss_dssp HTCEEECSEEEEEEEEE-T------TEEEEEEEETTSCEEEEEEEEEEECCGGGCHH
T ss_pred CCCEEEcCCEEEEEEEe-C------CEEEEEEEcCCCCEEEEEcCEEEECCCCchhh
Confidence 59999999999998641 1 25666555444433358899999999988754
No 13
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.87 E-value=0.022 Score=40.72 Aligned_cols=49 Identities=24% Similarity=0.380 Sum_probs=35.9
Q ss_pred Ee-EEEeeCceeceeeCCCCCCCcCceeeEEEEcC-CCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HG-VEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LG-VeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P-~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
+| ++|+.+.+++++.. ++ ||++.+.- .+.....++.|.||+|||.++.+
T Consensus 121 ~g~~~v~~~~~v~~i~~--~~------~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~v 171 (410)
T 3c96_A 121 LGQQAVRTGLGVERIEE--RD------GRVLIGARDGHGKPQALGADVLVGADGIHSAV 171 (410)
T ss_dssp HCTTSEEESEEEEEEEE--ET------TEEEEEEEETTSCEEEEEESEEEECCCTTCHH
T ss_pred CCCcEEEECCEEEEEec--CC------ccEEEEecCCCCCceEEecCEEEECCCccchh
Confidence 36 58999999999975 21 68887752 12323467899999999998865
No 14
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.72 E-value=0.013 Score=40.14 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=36.5
Q ss_pred eeeeeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 5 YVVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 5 LKVALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
++-|.-.|++++.+....++..-. +...+.+... +......+.|+||||||.++.+
T Consensus 109 ~~~a~~~G~~~~~~~~v~~~~~~~----~~~~~v~~~~---~~~~~~~~a~~vIgAdG~~S~v 164 (397)
T 3oz2_A 109 AALAAKAGADVWVKSPALGVIKEN----GKVAGAKIRH---NNEIVDVRAKMVIAADGFESEF 164 (397)
T ss_dssp HHHHHHHTCEEESSCCEEEEEEET----TEEEEEEEEE---TTEEEEEEEEEEEECCCTTCHH
T ss_pred HHHHHhcCcEEeeeeeeeeeeecc----ceeeeeeecc---cccceEEEEeEEEeCCccccHH
Confidence 344455699999999999987421 1133443332 2233456789999999998864
No 15
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=92.47 E-value=0.12 Score=38.66 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=37.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+|+.+...+++..- ++...|+++.. .+.....++.|.||+|||.++.+.
T Consensus 124 ~Gv~i~~~~~V~~v~~~----~~~v~gv~~~~--~dG~~~~i~ad~VI~AdG~~S~vr 175 (512)
T 3e1t_A 124 KGVDVRERHEVIDVLFE----GERAVGVRYRN--TEGVELMAHARFIVDASGNRTRVS 175 (512)
T ss_dssp TTCEEESSCEEEEEEEE----TTEEEEEEEEC--SSSCEEEEEEEEEEECCCTTCSSG
T ss_pred CCCEEEcCCEEEEEEEE----CCEEEEEEEEe--CCCCEEEEEcCEEEECCCcchHHH
Confidence 69999999999999851 11234566554 233333678999999999988763
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=92.39 E-value=0.11 Score=36.70 Aligned_cols=43 Identities=28% Similarity=0.387 Sum_probs=33.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+....++.. + | ++.+. +. ..+++|.||+|||.++.+
T Consensus 120 ~gv~i~~~~~v~~i~~---~------~-~v~~~--~g--~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 120 LGVDISVNSEAVAADP---V------G-RLTLQ--TG--EVLEADLIVGADGVGSKV 162 (379)
T ss_dssp TTCEEESSCCEEEEET---T------T-EEEET--TS--CEEECSEEEECCCTTCHH
T ss_pred cCCEEEeCCEEEEEEe---C------C-EEEEC--CC--CEEEcCEEEECCCccHHH
Confidence 4899999999999975 1 4 66664 22 258899999999998764
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=91.58 E-value=0.022 Score=44.21 Aligned_cols=57 Identities=12% Similarity=0.094 Sum_probs=38.2
Q ss_pred eeEEeE--EEeeCceeceeeCCCCCCCcCceeeEEEEcC----CCCCCCccEEeEEEecCCCcccc
Q psy4053 8 NQVHGV--EIHEGVGFESLLPPPSNQDEEKIGWRAVVSP----PDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 8 ALLLGV--eIH~~V~F~~L~eP~~~~~~~~~GWra~~~P----~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
|.-+|+ +|+.+.+.+++..-. +. ...++++.+.- .+.....++.|.||||||.++++
T Consensus 151 a~~~g~~v~v~~~~~v~~l~~~~-~~--~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~v 213 (639)
T 2dkh_A 151 MRNSPSRLEPHYARRVLDVKVDH-GA--ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNV 213 (639)
T ss_dssp HHHSTTCCCCBCSEEEEEEEECT-TC--SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHH
T ss_pred HHhCCCCcEEecCCEEEEEEECC-CC--CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHH
Confidence 333565 999999999997522 11 12368887762 12223457899999999999864
No 18
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=90.48 E-value=0.034 Score=43.75 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=14.9
Q ss_pred ccEEeEEEecCCCcccc
Q psy4053 51 QYEFNVLVGADGKRNTL 67 (74)
Q Consensus 51 ~~eFdvlIgAdG~rn~l 67 (74)
..+.|.||||||.++++
T Consensus 216 ~i~A~~VVGADG~~S~V 232 (665)
T 1pn0_A 216 TVHCKYVIGCDGGHSWV 232 (665)
T ss_dssp EEEEEEEEECCCTTCHH
T ss_pred EEEeCEEEeccCCCCHH
Confidence 46799999999999875
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.21 E-value=0.17 Score=35.08 Aligned_cols=49 Identities=12% Similarity=0.178 Sum_probs=33.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeE-EEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWR-AVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWr-a~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+...+++..- + .+|+ +.+.- +..-..++.|.||+|||.++.+
T Consensus 115 ~gv~i~~~~~v~~i~~~--~-----~~v~gv~~~~-~~~~~~~~a~~vV~A~G~~s~~ 164 (397)
T 3cgv_A 115 AGADVWVKSPALGVIKE--N-----GKVAGAKIRH-NNEIVDVRAKMVIAADGFESEF 164 (397)
T ss_dssp HTCEEESSCCEEEEEEE--T-----TEEEEEEEEE-TTEEEEEEEEEEEECCCTTCHH
T ss_pred CCCEEEECCEEEEEEEe--C-----CEEEEEEEEE-CCeEEEEEcCEEEECCCcchHh
Confidence 59999999999998742 1 1455 55531 1122357899999999988753
No 20
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=89.40 E-value=0.15 Score=37.10 Aligned_cols=52 Identities=17% Similarity=0.038 Sum_probs=34.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+....++..- . +...|.++... .+.....++.|.||+|||.++.+
T Consensus 113 ~gv~i~~~~~v~~i~~~-~---~~v~gv~~~~~-~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 113 RGVEIWDLTTAMKPIFE-D---GYVKGAVLFNR-RTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp TTCEEESSEEEEEEEEE-T---TEEEEEEEEET-TTTEEEEEECSEEEECCGGGCTT
T ss_pred cCCEEEeCcEEEEEEEE-C---CEEEEEEEEEc-CCCceEEEEcCEEEECcCCchhh
Confidence 58999999999998741 1 11233444321 12222357899999999998875
No 21
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=88.52 E-value=0.45 Score=36.04 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=33.6
Q ss_pred EeeCceeceeeCCCCCCCcCceeeEEEEcC-CCCCCCccEEeEEEecCCCcccc
Q psy4053 15 IHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 15 IH~~V~F~~L~eP~~~~~~~~~GWra~~~P-~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
|+.+.+.+++..- . .+|++.+.- .+.....++.|.||+|||.++++
T Consensus 152 v~~~~~v~~~~~~---~----~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~v 198 (549)
T 2r0c_A 152 LRTRSRLDSFEQR---D----DHVRATITDLRTGATRAVHARYLVACDGASSPT 198 (549)
T ss_dssp EECSEEEEEEEEC---S----SCEEEEEEETTTCCEEEEEEEEEEECCCTTCHH
T ss_pred cccCcEEEEEEEe---C----CEEEEEEEECCCCCEEEEEeCEEEECCCCCcHH
Confidence 7889999998641 1 268887763 23333468899999999999864
No 22
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=86.66 E-value=0.46 Score=34.92 Aligned_cols=48 Identities=17% Similarity=0.186 Sum_probs=33.2
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCcee--eEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIG--WRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~G--Wra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
|.-.||+|+.+ +.+++.. .++ | +.+.+. +. ..++.|.||+|||.++.+
T Consensus 183 a~~~gv~~~~~-~v~~i~~-~~~------~~~~~v~~~--~g--~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 183 AIARGVRHVVD-DVQHVGQ-DER------GWISGVHTK--QH--GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHTTCEEEEC-CEEEEEE-CTT------SCEEEEEES--SS--CEEECSEEEECCGGGCCC
T ss_pred HHHCCCEEEEC-eEeEEEE-cCC------CCEEEEEEC--CC--CEEEcCEEEECCCcchHH
Confidence 33369999999 8888864 111 3 444443 32 268999999999998765
No 23
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=86.23 E-value=0.65 Score=34.41 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=34.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+.+.+++..- ..+|++++.- . .++.|.||.|+|.++.+
T Consensus 145 ~Gv~i~~~~~V~~i~~~-------~~~~~V~~~~--g---~i~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 145 AGVQLRLETSIGEVERT-------ASGFRVTTSA--G---TVDAASLVVASGGKSIP 189 (417)
T ss_dssp HTCEEECSCCEEEEEEE-------TTEEEEEETT--E---EEEESEEEECCCCSSCG
T ss_pred CCCEEEECCEEEEEEEe-------CCEEEEEECC--c---EEEeeEEEECCCCccCC
Confidence 58999999999998641 1268887642 2 68999999999998753
No 24
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.42 E-value=1.2 Score=27.89 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=31.8
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+ +.+++.+ .+ .+|++++. +. .+++|.||.|+|.+..
T Consensus 69 ~gv~v~~~-~v~~i~~-~~------~~~~v~~~--~g---~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRD-MG------GVFEVETE--EG---VEKAERLLLCTHKDPT 111 (180)
T ss_dssp TTCEEEEC-CCCEEEE-CS------SSEEEECS--SC---EEEEEEEEECCTTCCH
T ss_pred cCCEEEeC-EEEEEEE-cC------CEEEEEEC--CC---EEEECEEEECCCCCCC
Confidence 48899998 8888763 11 25877764 32 6899999999999863
No 25
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=85.05 E-value=0.2 Score=35.48 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=26.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+.+.+++.+ . ...+.|.||+|||.++.
T Consensus 111 ~gv~i~~~~~v~~i~~---~-------------------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 111 QGIAIRFESPLLEHGE---L-------------------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp TTCEEETTCCCCSGGG---C-------------------CGGGCSEEEECCGGGGG
T ss_pred CCCEEEeCCEeccchh---c-------------------ccccCCEEEECCCCCch
Confidence 3888998888887753 0 02578999999999875
No 26
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=84.42 E-value=0.48 Score=36.90 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=37.3
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
-.||+|+.+...+++..- + ..+|.+.+.- +.....++.|.||+|||.++.+
T Consensus 140 ~~Gv~i~~g~~V~~v~~~--~----g~~~~V~~~~-~G~~~~i~AdlVV~AdG~~S~l 190 (591)
T 3i3l_A 140 SRGITVHEETPVTDVDLS--D----PDRVVLTVRR-GGESVTVESDFVIDAGGSGGPI 190 (591)
T ss_dssp HTTCEEETTCCEEEEECC--S----TTCEEEEEEE-TTEEEEEEESEEEECCGGGCHH
T ss_pred hCCCEEEeCCEEEEEEEc--C----CCEEEEEEec-CCceEEEEcCEEEECCCCcchh
Confidence 369999999999998742 1 1268887753 2222457899999999998754
No 27
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=83.34 E-value=0.81 Score=34.17 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=31.5
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+|+.+ +.+++.. .++ |+.+.+.-.+.. .++.|.||+|||.++.+
T Consensus 189 ~Gv~i~~~-~v~~i~~-~~~------g~~~~v~~~~g~--~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIIN-NQH------GDIEKLITKQNG--EISGQLFIDCTGAKSLL 235 (526)
T ss_dssp SCCEEEEC-CEEEEEE-CTT------SCEEEEEESSSC--EEECSEEEECSGGGCCC
T ss_pred CCCEEEEe-EEEEEEe-cCC------CcEEEEEECCCC--EEEcCEEEECCCcchHH
Confidence 69999999 6888864 111 443333222322 38899999999998765
No 28
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=82.53 E-value=1 Score=34.05 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=32.2
Q ss_pred EE-eEEEeeCceeceeeCCCCCCCcCcee--eEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 10 VH-GVEIHEGVGFESLLPPPSNQDEEKIG--WRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 10 LL-GVeIH~~V~F~~L~eP~~~~~~~~~G--Wra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
-. ||+|+.+ +.+++.. .++ | +.+.+. +. ..++.|.||+|||.++.+
T Consensus 206 ~~~Gv~i~~~-~V~~i~~-~~~------g~~~~v~~~--~G--~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 206 EKLGVRHVED-RVEHVQR-DAN------GNIESVRTA--TG--RVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHSCCEEEEC-CEEEEEE-CTT------SCEEEEEET--TS--CEEECSEEEECCGGGCCC
T ss_pred hcCCcEEEEC-eEeEEEE-cCC------CCEEEEEEC--CC--CEEECCEEEECCCCchhh
Confidence 35 9999999 8888864 111 3 344443 22 358899999999987765
No 29
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=82.17 E-value=0.83 Score=34.15 Aligned_cols=48 Identities=13% Similarity=0.113 Sum_probs=32.5
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
-.||+++.+ +.+++.. .++. .-|.+.+. +. ..++.|.||+|||.++.+
T Consensus 177 ~~gv~~~~~-~v~~i~~-~~~g----~~~~v~~~--~g--~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 177 ERGVNRVVD-EVVDVRL-NNRG----YISNLLTK--EG--RTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HTTCEEEEC-CEEEEEE-CTTS----CEEEEEET--TS--CEECCSEEEECCGGGCCC
T ss_pred HCCCEEEEe-eEeEEEE-cCCC----cEEEEEEC--CC--cEEEeCEEEECCCCchhh
Confidence 359999999 8888864 1111 12455543 22 257899999999998766
No 30
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=78.26 E-value=6.6 Score=26.10 Aligned_cols=49 Identities=10% Similarity=0.091 Sum_probs=33.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.|++++.+.+-..+.+ ..+. ...|++.+.-. ..+++|.||.|+|.+...
T Consensus 69 ~~v~~~~~~~v~~i~~-~~~~---~~~~~v~~~~g----~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIP-AAVE---GGLHQIETASG----AVLKARSIIVATGAKWRN 117 (310)
T ss_dssp SCEEEECSCCEEEEEC-CSST---TCCEEEEETTS----CEEEEEEEEECCCEEECC
T ss_pred cCCeEEccCEEEEEEe-cccC---CceEEEEECCC----CEEEeCEEEECcCCCcCC
Confidence 4889998877777753 2211 12688887532 368999999999986543
No 31
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=77.16 E-value=1.4 Score=36.61 Aligned_cols=29 Identities=24% Similarity=0.610 Sum_probs=21.6
Q ss_pred eCCCCCC---CcCceeeEEEEcCCCCCCCccE
Q psy4053 25 LPPPSNQ---DEEKIGWRAVVSPPDHPVSQYE 53 (74)
Q Consensus 25 ~eP~~~~---~~~~~GWra~~~P~~h~ls~~e 53 (74)
-|||... ....+|||+|+.|-.=++.+||
T Consensus 451 KPPp~~~~~~~~~~iGWRVEFRpmEvQlTDFE 482 (692)
T 3ig5_A 451 KPPTQQATPDKKDSPGWRVEFRPFEVQLLDFE 482 (692)
T ss_dssp ECCCTTCCTTCTTSCCEEEEECCCBCCSSHHH
T ss_pred CCCCccccCCCCCCCCceeeeecccccCcHHH
Confidence 4666521 1237899999999999999887
No 32
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=73.88 E-value=3.9 Score=27.54 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=31.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGF 70 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~GF 70 (74)
.|++++.+. ..++.. .. .+|++.+ .. ..+++|.||.|+|.+...+++
T Consensus 83 ~gv~~~~~~-v~~i~~-~~------~~~~v~~--~~---~~~~~~~vv~A~G~~~~~~~~ 129 (333)
T 1vdc_A 83 FGTTIFTET-VTKVDF-SS------KPFKLFT--DS---KAILADAVILAIGAVAKRLSF 129 (333)
T ss_dssp TTCEEECCC-CCEEEC-SS------SSEEEEC--SS---EEEEEEEEEECCCEEECCCCC
T ss_pred CCCEEEEeE-EEEEEE-cC------CEEEEEE--CC---cEEEcCEEEECCCCCcCCCCC
Confidence 477887774 555542 21 2688876 22 368999999999988665443
No 33
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=73.45 E-value=3 Score=27.85 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=31.7
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeE-EEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWR-AVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWr-a~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
+|++++.+.+-+++.. .. .+|. +.+. +. .+++|.||.|+|.++.
T Consensus 89 ~~~~~~~~~~v~~i~~-~~------~~~~~v~~~--~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 89 YALPVLRPIRVQRVSH-FG------ERLRVVARD--GR---QWLARAVISATGTWGE 133 (357)
T ss_dssp TTCCEECSCCEEEEEE-ET------TEEEEEETT--SC---EEEEEEEEECCCSGGG
T ss_pred cCCEEEcCCEEEEEEE-CC------CcEEEEEeC--CC---EEEeCEEEECCCCCCC
Confidence 4888999988888864 11 2688 6643 22 7899999999996443
No 34
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=73.31 E-value=2.9 Score=32.10 Aligned_cols=52 Identities=21% Similarity=0.198 Sum_probs=33.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEc-----CCCCC------CCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVS-----PPDHP------VSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~-----P~~h~------ls~~eFdvlIgAdG~rn~l 67 (74)
+||+|+.+....++..- + ++.. +.+.+. ....+ =..++.|.||+|||.++.+
T Consensus 157 ~Gv~i~~g~~v~~l~~~-~--~g~V--~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 157 LGVEVYPGYAAAEILFH-E--DGSV--KGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp TTCEEETTCCEEEEEEC-T--TSSE--EEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred cCCEEEcCCEEEEEEEc-C--CCCE--EEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 59999999999999741 1 1111 223332 11111 1357889999999998754
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=72.37 E-value=4.9 Score=27.02 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=34.9
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
|.-.||+|+.+.+.+++.. ..+ ..|.+.+. +..-..++.|.||.|+|-.+
T Consensus 160 ~~~~Gv~i~~~~~v~~i~~-~~~-----~~~~v~~~--~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 160 AESDGAQLVFHTPLIAGRV-RPE-----GGFELDFG--GAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHTTCEEECSCCEEEEEE-CTT-----SSEEEEEC--TTSCEEEEEEEEEECCGGGH
T ss_pred HHHCCCEEECCCEEEEEEE-cCC-----ceEEEEEC--CCceeEEEeCEEEECCCcch
Confidence 3346999999999999974 111 13887654 22234688999999999765
No 36
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=71.14 E-value=4.7 Score=29.37 Aligned_cols=48 Identities=19% Similarity=0.214 Sum_probs=34.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+...+++..- ++.. ..+|+++.. +. .++.|.||.|+|.+..
T Consensus 122 ~Gv~i~~~~~v~~i~~~-~~g~--~~~~~v~~~--~g---~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 122 YGAKILLRSEVSQVERI-QNDE--KVRFVLQVN--ST---QWQCKNLIVATGGLSM 169 (401)
T ss_dssp HTCEEECSCCEEEEEEC-CSCS--SCCEEEEET--TE---EEEESEEEECCCCSSC
T ss_pred CCCEEEeCCEEEEEEcc-cCcC--CCeEEEEEC--CC---EEECCEEEECCCCccC
Confidence 58999999999988731 1100 125887763 22 5899999999999884
No 37
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=70.66 E-value=4.5 Score=27.20 Aligned_cols=45 Identities=7% Similarity=0.120 Sum_probs=32.6
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCcc-EEeEEEecCCCcccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQY-EFNVLVGADGKRNTL 67 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~-eFdvlIgAdG~rn~l 67 (74)
|++|+.+...+++.. .. .||++.+. +. ..+ ++|.||+|+|-+...
T Consensus 119 g~~i~~~~~v~~i~~-~~------~~~~v~~~--~g--~~~~~a~~vV~a~g~~~~~ 164 (336)
T 1yvv_A 119 DMPVSFSCRITEVFR-GE------EHWNLLDA--EG--QNHGPFSHVIIATPAPQAS 164 (336)
T ss_dssp TCCEECSCCEEEEEE-CS------SCEEEEET--TS--CEEEEESEEEECSCHHHHG
T ss_pred cCcEEecCEEEEEEE-eC------CEEEEEeC--CC--cCccccCEEEEcCCHHHHH
Confidence 789999999999863 21 27998863 22 123 489999999987643
No 38
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=67.60 E-value=5.3 Score=27.40 Aligned_cols=44 Identities=18% Similarity=0.015 Sum_probs=32.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.|++|+.+...+++.. .. .+|.+.+. +. .++.|.||.|+|..+.
T Consensus 177 ~g~~i~~~~~v~~i~~-~~------~~~~v~~~--~g---~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 177 LGAEIFEHTPVLHVER-DG------EALFIKTP--SG---DVWANHVVVASGVWSG 220 (382)
T ss_dssp TTCEEETTCCCCEEEC-SS------SSEEEEET--TE---EEEEEEEEECCGGGTH
T ss_pred CCCEEEcCCcEEEEEE-EC------CEEEEEcC--Cc---eEEcCEEEECCChhHH
Confidence 5899999999999874 11 25766553 22 6899999999998653
No 39
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=66.92 E-value=6 Score=27.13 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=32.6
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
-.||+|+.+...+++..- . .+|+++.. +. .++.|.||.|+|...
T Consensus 162 ~~Gv~i~~~~~v~~i~~~-~------~~~~v~~~--~g---~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 162 ARGAKVLTHTRVEDFDIS-P------DSVKIETA--NG---SYTADKLIVSMGAWN 205 (389)
T ss_dssp HTTCEEECSCCEEEEEEC-S------SCEEEEET--TE---EEEEEEEEECCGGGH
T ss_pred HCCCEEEcCcEEEEEEec-C------CeEEEEeC--CC---EEEeCEEEEecCccH
Confidence 358999999999998741 1 15887652 22 588999999999753
No 40
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=65.14 E-value=1.8 Score=32.81 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=37.4
Q ss_pred eeeeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 6 VVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 6 KVALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
+-+.-.||+|+.+...++|+.- + ++...|+++.. .+.....+..|.||.|+|....
T Consensus 258 ~~~~~~gv~i~~~~~v~~l~~~--~-~g~v~Gv~~~~--~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 258 KAAKEQGIDTRLNSRVVKLVVN--D-DHSVVGAVVHG--KHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHTTCCEECSEEEEEEEEC--T-TSBEEEEEEEE--TTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHhcCCEEEeCCEEEEEEEC--C-CCcEEEEEEEe--CCCcEEEEEcCEEEEecCCccc
Confidence 3344469999999999999841 1 12356777764 2232334678999999998664
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=62.66 E-value=8.5 Score=26.77 Aligned_cols=45 Identities=22% Similarity=0.289 Sum_probs=32.9
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKR 64 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~r 64 (74)
|.-.||+|+.+....++.. .. .+|+++.. + ..++.|.||.|+|..
T Consensus 163 a~~~Gv~i~~~~~V~~i~~-~~------~~v~v~t~--~---g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 163 AQAAGATLRAGETVTELVP-DA------DGVSVTTD--R---GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHTTCEEEESCCEEEEEE-ET------TEEEEEES--S---CEEEEEEEEECCGGG
T ss_pred HHHcCCEEECCCEEEEEEE-cC------CeEEEEEC--C---CEEEcCEEEEcCCcC
Confidence 3345999999999999874 11 26887652 2 268899999999976
No 42
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=62.25 E-value=6.2 Score=28.74 Aligned_cols=46 Identities=22% Similarity=0.189 Sum_probs=34.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+...+++.. ++ + .-|.+++. +. ..++.|.||.|+|..+.
T Consensus 147 ~GV~i~~~~~V~~i~~--~~--~--~v~~V~~~--~G--~~i~Ad~VVlAtGg~s~ 192 (447)
T 2i0z_A 147 LGVKIRTNTPVETIEY--EN--G--QTKAVILQ--TG--EVLETNHVVIAVGGKSV 192 (447)
T ss_dssp TTCEEECSCCEEEEEE--ET--T--EEEEEEET--TC--CEEECSCEEECCCCSSS
T ss_pred CCCEEEeCcEEEEEEe--cC--C--cEEEEEEC--CC--CEEECCEEEECCCCCcC
Confidence 5999999999999974 11 1 12777775 22 24788999999999883
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=62.03 E-value=2.5 Score=29.00 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=32.8
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
|.-.|++|+.+.+.+++.. .. .+|+++.. +. .++.|.||-|+|-..
T Consensus 159 ~~~~G~~i~~~~~V~~i~~-~~------~~~~v~~~--~g---~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 159 AKEAGCAQLFNCPVTAIRH-DD------DGVTIETA--DG---EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHTTCEEECSCCEEEEEE-CS------SSEEEEES--SC---EEEEEEEEECCGGGG
T ss_pred HHHCCCEEEcCCEEEEEEE-cC------CEEEEEEC--CC---eEEcCEEEEcCCccH
Confidence 3346999999999999874 11 15877653 22 488999999999653
No 44
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=61.51 E-value=4 Score=27.25 Aligned_cols=23 Identities=26% Similarity=0.437 Sum_probs=19.0
Q ss_pred ceeeEEEEcCCCCCCCccEEeEEEecCC
Q psy4053 35 KIGWRAVVSPPDHPVSQYEFNVLVGADG 62 (74)
Q Consensus 35 ~~GWra~~~P~~h~ls~~eFdvlIgAdG 62 (74)
..|||.-..|+. -+|-.|||+++
T Consensus 9 G~GWRLgwdp~~-----~~f~~LIGge~ 31 (122)
T 2nvn_A 9 GAGWRLGWDETA-----HRYPGLVGTTD 31 (122)
T ss_dssp ETTEEEEEETTC-----SSCCEEEECSS
T ss_pred CCCeEEEECCCc-----ccCCEEEccCc
Confidence 579999999963 36899999876
No 45
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=61.39 E-value=19 Score=24.44 Aligned_cols=54 Identities=15% Similarity=0.143 Sum_probs=33.6
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEE-----cCCC---CCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVV-----SPPD---HPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~-----~P~~---h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+|+.+.+.+++..- . +...|-++.. ...+ .....++.|.||.|+|.+..+.
T Consensus 133 ~gv~i~~~~~V~~i~~~-~---~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 133 PNVKLFNAVAAEDLIVK-G---NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp TTEEEEETEEEEEEEEE-T---TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTT
T ss_pred CCCEEEcCcEEEEEEec-C---CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHH
Confidence 58999999999998741 1 1123433332 1101 2234688999999999876543
No 46
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=61.23 E-value=4.8 Score=29.08 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=31.4
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCC-CCccEEeEEEecCCCccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHP-VSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~-ls~~eFdvlIgAdG~rn~ 66 (74)
++.|+.+.+-+++.. . ..+|++.+.-. +.. ...++||.||.|+|..+.
T Consensus 129 ~~~i~~~t~V~~v~~-~------~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 129 LPFIKLATDVLDIEK-K------DGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp GGGEECSEEEEEEEE-E------TTEEEEEEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred hCeEEeCCEEEEEEe-C------CCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 456777777777743 1 12699987631 122 235889999999998543
No 47
>2it9_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; HET: MSE PGE; 1.80A {Prochlorococcus marinus} SCOP: d.18.1.3
Probab=60.03 E-value=4.4 Score=27.22 Aligned_cols=23 Identities=26% Similarity=0.681 Sum_probs=18.9
Q ss_pred ceeeEEEEcCCCCCCCccEEeEEEecCC
Q psy4053 35 KIGWRAVVSPPDHPVSQYEFNVLVGADG 62 (74)
Q Consensus 35 ~~GWra~~~P~~h~ls~~eFdvlIgAdG 62 (74)
..|||.-..|+. -+|-.|||+++
T Consensus 7 G~GWRLgwdp~~-----~~f~~LIGge~ 29 (127)
T 2it9_A 7 GPGWRIIFDSSR-----DNFSTLIGGET 29 (127)
T ss_dssp ETTEEEEEETTC-----SSCCEEEECSS
T ss_pred cCCeEEEECCCc-----ccCCEEEccCc
Confidence 579999999963 36899999875
No 48
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=59.75 E-value=20 Score=24.27 Aligned_cols=44 Identities=14% Similarity=0.171 Sum_probs=32.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
+|++|+.+.+-.++.+ .. .+|++...- . .+.+|.||-|.|.+..
T Consensus 101 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~~--g---~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 101 YELNIFENTVVTNISA-DD------AYYTIATTT--E---TYHADYIFVATGDYNF 144 (369)
T ss_dssp TTCEEECSCCEEEEEE-CS------SSEEEEESS--C---CEEEEEEEECCCSTTS
T ss_pred cCCeEEeCCEEEEEEE-CC------CeEEEEeCC--C---EEEeCEEEECCCCCCc
Confidence 5888988887777753 11 268887642 2 5899999999998754
No 49
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=59.44 E-value=14 Score=24.54 Aligned_cols=48 Identities=10% Similarity=0.164 Sum_probs=29.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGF 70 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~GF 70 (74)
+|++++. .+-.++.. .. .+|++.+.- . ..+++|.||.|+|.+...+.+
T Consensus 72 ~~v~~~~-~~v~~i~~-~~------~~~~v~~~~--g--~~~~~~~vv~AtG~~~~~~~~ 119 (311)
T 2q0l_A 72 FGLKHEM-TAVQRVSK-KD------SHFVILAED--G--KTFEAKSVIIATGGSPKRTGI 119 (311)
T ss_dssp TSCEEEC-SCEEEEEE-ET------TEEEEEETT--S--CEEEEEEEEECCCEEECCCCC
T ss_pred cCCEEEE-EEEEEEEE-cC------CEEEEEEcC--C--CEEECCEEEECCCCCCCCCCC
Confidence 3677765 34444432 11 268887642 2 368999999999987655433
No 50
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=58.14 E-value=25 Score=26.27 Aligned_cols=49 Identities=10% Similarity=0.094 Sum_probs=34.2
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+++.+.+-.++.+ ..+. ...|++.+.-. ..+.+|.||-|+|.+...
T Consensus 280 ~gv~v~~~~~v~~i~~-~~~~---~~~~~V~~~~g----~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 280 YDVDVIDSQSASKLVP-AATE---GGLHQIETASG----AVLKARSIIIATGAKWRN 328 (521)
T ss_dssp SCEEEECSCCEEEEEC-CSST---TSCEEEEETTS----CEEEEEEEEECCCEEECC
T ss_pred cCCEEEcCCEEEEEEe-ccCC---CceEEEEECCC----CEEEcCEEEECCCCCcCC
Confidence 5899999988777763 2211 12688887522 368999999999976543
No 51
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=58.06 E-value=5.6 Score=27.05 Aligned_cols=46 Identities=15% Similarity=0.104 Sum_probs=33.3
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
|.-.||+|+.+..-+++.. . ..+|++++. +. .+..|.||-|+|-..
T Consensus 164 a~~~Gv~i~~~~~V~~i~~-~------~~~~~V~t~--~g---~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 164 IRRNQGQVLCNHEALEIRR-V------DGAWEVRCD--AG---SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHTTCEEESSCCCCEEEE-E------TTEEEEECS--SE---EEEESEEEECCGGGH
T ss_pred HHHCCCEEEcCCEEEEEEE-e------CCeEEEEeC--CC---EEEcCEEEECCChhH
Confidence 3345999999999999874 1 125887653 22 688999999999753
No 52
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=57.25 E-value=9.2 Score=28.67 Aligned_cols=45 Identities=11% Similarity=0.049 Sum_probs=29.8
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
+++|+.+++..++.. .++ ...|++.+.- . ..+++|.||.|+|..+
T Consensus 110 ~~~i~~~~~V~~~~~-~~~----~~~w~V~~~~--G--~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 110 RSGITFHTTVTAAAF-DEA----TNTWTVDTNH--G--DRIRARYLIMASGQLS 154 (542)
T ss_dssp GGGEECSCCEEEEEE-ETT----TTEEEEEETT--C--CEEEEEEEEECCCSCC
T ss_pred CceEEcCcEEEEEEE-cCC----CCeEEEEECC--C--CEEEeCEEEECcCCCC
Confidence 356777777766653 111 1369998752 2 2589999999999654
No 53
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=56.15 E-value=10 Score=28.55 Aligned_cols=53 Identities=8% Similarity=-0.064 Sum_probs=35.2
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
+.-.||+|+.+...++|+.- .++...|.+++.. +.....+..|.||.|+|...
T Consensus 265 ~~~~gv~i~~~~~v~~l~~~---~~g~v~Gv~~~~~--~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 265 AVKRNIDLRMNTRGIEVLKD---DKGTVKGILVKGM--YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEC---TTSCEEEEEEEET--TTEEEEEECSEEEECCCCCT
T ss_pred HHhcCCEEEeCCEeeEeEEc---CCCeEEEEEEEeC--CCcEEEEECCeEEEeCCCcc
Confidence 33469999999999999841 1133556666542 22233467788999999854
No 54
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=52.40 E-value=28 Score=24.64 Aligned_cols=49 Identities=29% Similarity=0.127 Sum_probs=31.9
Q ss_pred EEeEEEeeCceeceeeC-----------CCCCCCcCceeeEEEEcCCCCCCCcc--EEeEEEecCCCcc
Q psy4053 10 VHGVEIHEGVGFESLLP-----------PPSNQDEEKIGWRAVVSPPDHPVSQY--EFNVLVGADGKRN 65 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~e-----------P~~~~~~~~~GWra~~~P~~h~ls~~--eFdvlIgAdG~rn 65 (74)
-.||+|+.+.+-.++.. |..+++ ..-|.+++. +. .+ +.|.||-|+|-..
T Consensus 193 ~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~--~g---~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 193 GAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLS--DG---TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEET--TS---CEEEEEEEEEECCGGGH
T ss_pred hCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeC--CC---EEeecCCEEEECCCcCH
Confidence 35999999999888864 121111 112566552 22 57 8999999999653
No 55
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=51.93 E-value=24 Score=23.30 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=31.7
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKR 64 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~r 64 (74)
+|++++.+.+-.++.. ..+ .+|++.+.-. .+++|.||-|.|.+
T Consensus 80 ~~~~~~~~~~v~~i~~-~~~-----~~~~v~~~~g-----~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 80 FDQTICLEQAVESVEK-QAD-----GVFKLVTNEE-----THYSKTVIITAGNG 122 (332)
T ss_dssp SCCEEECSCCEEEEEE-CTT-----SCEEEEESSE-----EEEEEEEEECCTTS
T ss_pred hCCcEEccCEEEEEEE-CCC-----CcEEEEECCC-----EEEeCEEEECCCCC
Confidence 4889999888888853 221 2688887532 28999999999983
No 56
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=51.87 E-value=37 Score=22.36 Aligned_cols=50 Identities=12% Similarity=0.046 Sum_probs=32.5
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccCC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEG 69 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~G 69 (74)
.|++++.+. ..++.+ .. ..|+....-. ..-..+++|.||-|.|.+...+.
T Consensus 97 ~gv~i~~~~-v~~i~~-~~------~~~~v~~~~~-~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 97 FGTEIITET-VSKVDL-SS------KPFKLWTEFN-EDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp TTCEEECSC-EEEEEC-SS------SSEEEEETTC-SSSCCEEEEEEEECCCEEECCCC
T ss_pred cCCEEEEeE-EEEEEE-cC------CEEEEEEEec-CCCcEEEeCEEEECcCCCcCCCC
Confidence 478888877 556542 21 2577766421 12356899999999998765543
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=51.83 E-value=35 Score=23.25 Aligned_cols=45 Identities=7% Similarity=-0.000 Sum_probs=31.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
+|++++.+.+-.++.. ..+ ..|++.+.- . ..+++|.||.|+|.++
T Consensus 87 ~~~~~~~~~~v~~i~~-~~~-----~~~~v~~~~--g--~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 87 YNPDVVLNETVTKYTK-LDD-----GTFETRTNT--G--NVYRSRAVLIAAGLGA 131 (360)
T ss_dssp TCCEEECSCCEEEEEE-CTT-----SCEEEEETT--S--CEEEEEEEEECCTTCS
T ss_pred hCCEEEcCCEEEEEEE-CCC-----ceEEEEECC--C--cEEEeeEEEEccCCCc
Confidence 4788888877777753 211 158887642 2 4689999999999854
No 58
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=51.36 E-value=14 Score=26.79 Aligned_cols=51 Identities=8% Similarity=-0.053 Sum_probs=34.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+.+-+++.. .. .++++.+...+..-..+++|.||-|.|.+...+
T Consensus 229 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTN-NG------DSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp TCCEEECSCEEEEEEE-CS------SSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred CCcEEEeCCEEEEEEE-cC------CeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 5899999999888863 11 146666653232224578999999999885443
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=51.26 E-value=21 Score=23.88 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=30.2
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKR 64 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~r 64 (74)
+|++++.+.+..++.. .. ..|++.+.- . ..+++|.||-|+|.+
T Consensus 78 ~~~~~~~~~~v~~i~~-~~------~~~~v~~~~--g--~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 78 FNPVYSLGERAETLER-EG------DLFKVTTSQ--G--NAYTAKAVIIAAGVG 120 (335)
T ss_dssp GCCEEEESCCEEEEEE-ET------TEEEEEETT--S--CEEEEEEEEECCTTS
T ss_pred cCCEEEeCCEEEEEEE-CC------CEEEEEECC--C--CEEEeCEEEECCCCC
Confidence 4678888877777653 11 168887642 1 468999999999985
No 60
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=50.84 E-value=10 Score=27.87 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=29.8
Q ss_pred eEE--EeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCC
Q psy4053 12 GVE--IHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGK 63 (74)
Q Consensus 12 GVe--IH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~ 63 (74)
|++ |+.+.+-.++.. ..+ ..+|++.+.-. +.....++||.||.|+|.
T Consensus 115 gv~~~i~~~~~V~~v~~-~~~----~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 115 GVRKYIRFNTAVRHVEF-NED----SQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp TCGGGEECSEEEEEEEE-ETT----TTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred CCcceEEeCCEEEEEEE-cCC----CCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 555 666766666643 211 23699987531 222346789999999994
No 61
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=50.23 E-value=10 Score=27.09 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=35.6
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+..=+++.. . ..+|++.+... +......++|.||-|.|-+..
T Consensus 329 ~~v~i~~~~~v~~v~~-~------~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA-T------AQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEE-E------TTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEe-c------CCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 5899999988777753 1 12699988743 344445789999999997754
No 62
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=48.98 E-value=15 Score=28.22 Aligned_cols=46 Identities=20% Similarity=0.248 Sum_probs=33.9
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
-.||+|+.++.-++|..- ..+|+++..- . ..++.|.||-|+|....
T Consensus 429 ~~Gv~i~~~t~V~~l~~~-------~~~v~V~t~~-G---~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 429 QQGLQIYYQYQLQNFSRK-------DDCWLLNFAG-D---QQATHSVVVLANGHQIS 474 (676)
T ss_dssp HTTCEEEESCCEEEEEEE-------TTEEEEEETT-S---CEEEESEEEECCGGGGG
T ss_pred hCCCEEEeCCeeeEEEEe-------CCeEEEEECC-C---CEEECCEEEECCCcchh
Confidence 359999999999999741 1268877642 1 24789999999998653
No 63
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=48.89 E-value=16 Score=26.68 Aligned_cols=51 Identities=14% Similarity=0.301 Sum_probs=35.5
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+|+.+..-+++..- ..+.++.+... +..-...++|.||-|.|.+-..+
T Consensus 252 ~gV~v~~~~~v~~i~~~-------~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 252 QGIDFKLGAKVTGAVKS-------GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp TTCEEECSEEEEEEEEE-------TTEEEEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred CCCEEEECCeEEEEEEe-------CCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 38999999888887641 12567777642 23345688999999999875443
No 64
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=47.70 E-value=18 Score=25.43 Aligned_cols=45 Identities=31% Similarity=0.339 Sum_probs=32.5
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+||.+..-+++.. .+ .++++.+. +. ..+++|.||-|.|.+..
T Consensus 200 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~--~g--~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKK-AG------EGLEAHLS--DG--EVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp TTCEEEESCCEEEEEE-ET------TEEEEEET--TS--CEEEESEEEECSCEEEC
T ss_pred cCCEEEeCCEEEEEEe-cC------CEEEEEEC--CC--CEEECCEEEECcCCCcC
Confidence 5899999988888753 11 25777764 22 46899999999998754
No 65
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=47.17 E-value=24 Score=24.02 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=30.3
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCC
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADG 62 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG 62 (74)
|++|+.+..-+++.. . ..+|++.+.-. ..+++|.||.|-.
T Consensus 123 g~~i~~~~~V~~i~~-~------~~~~~v~~~~g----~~~~ad~vV~A~p 162 (342)
T 3qj4_A 123 GAEVYFRHRVTQINL-R------DDKWEVSKQTG----SPEQFDLIVLTMP 162 (342)
T ss_dssp TCEEESSCCEEEEEE-C------SSSEEEEESSS----CCEEESEEEECSC
T ss_pred CCEEEeCCEEEEEEE-c------CCEEEEEECCC----CEEEcCEEEECCC
Confidence 899999999999964 1 12799887532 2378999999865
No 66
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=46.15 E-value=29 Score=23.82 Aligned_cols=45 Identities=9% Similarity=0.028 Sum_probs=32.7
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
-.||+|+.+.+.+++..- . ...|.+.+. +. .++.|.||.|+|...
T Consensus 186 ~~g~~i~~~~~v~~i~~~-~-----~~~~~v~~~--~g---~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 186 EMGVDIIQNCEVTGFIKD-G-----EKVTGVKTT--RG---TIHAGKVALAGAGHS 230 (405)
T ss_dssp HTTCEEECSCCEEEEEES-S-----SBEEEEEET--TC---CEEEEEEEECCGGGH
T ss_pred HCCCEEEcCCeEEEEEEe-C-----CEEEEEEeC--Cc---eEECCEEEECCchhH
Confidence 358999999999998741 1 124777653 22 689999999999764
No 67
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=44.30 E-value=17 Score=24.95 Aligned_cols=46 Identities=11% Similarity=0.089 Sum_probs=32.6
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeE-EEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWR-AVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWr-a~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
|.-.||+|+.+.+.+++..- . .+|+ +++. +. .++.|.||.|+|..+
T Consensus 159 ~~~~Gv~i~~~~~v~~i~~~-~------~~v~gv~~~--~g---~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 159 AKEYGAKLLEYTEVKGFLIE-N------NEIKGVKTN--KG---IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHTTCEEECSCCEEEEEES-S------SBEEEEEET--TE---EEECSEEEECCGGGH
T ss_pred HHHCCCEEECCceEEEEEEE-C------CEEEEEEEC--Cc---EEECCEEEECcchhH
Confidence 33459999999999998741 1 2576 5542 22 588999999999764
No 68
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=44.04 E-value=36 Score=22.19 Aligned_cols=47 Identities=9% Similarity=0.070 Sum_probs=30.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
+|++++.+ +-.++ +..+ ...|+..+.-.+ .+++|.||-|.|.+...+
T Consensus 75 ~~v~~~~~-~v~~i--~~~~----~~~~~v~~~~~~----~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 75 FGLKHEMV-GVEQI--LKNS----DGSFTIKLEGGK----TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp TCCEEECC-CEEEE--EECT----TSCEEEEETTSC----EEEEEEEEECCCEEECCC
T ss_pred cCcEEEEE-EEEEE--ecCC----CCcEEEEEecCC----EEEeCEEEEeeCCCCCCC
Confidence 46777777 55666 2221 125886555433 889999999999765443
No 69
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=44.03 E-value=22 Score=25.64 Aligned_cols=46 Identities=24% Similarity=0.366 Sum_probs=33.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+.+-+++.+ .. .++++++. +. ..+++|.||-|.|.+...
T Consensus 221 ~Gv~i~~~~~V~~i~~-~~------~~v~v~~~--~g--~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVP-EA------KGARVELE--GG--EVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HTCEEECSCCEEEEEE-ET------TEEEEEET--TS--CEEEESEEEECSCEEECC
T ss_pred CCCEEEECCEEEEEEE-eC------CEEEEEEC--CC--eEEEcCEEEECcCCCcCC
Confidence 4899999998888863 11 14666664 21 458899999999988654
No 70
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=43.49 E-value=52 Score=23.70 Aligned_cols=46 Identities=11% Similarity=0.000 Sum_probs=32.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.... + +.++.+ .+. ..++|.||-|-|.+-..+
T Consensus 202 ~GV~i~~~~~v~~i~~~~----~---~v~v~~--~~g---~i~aD~Vv~A~G~~p~~~ 247 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETA----N---GIVLET--SEQ---EISCDSGIFALNLHPQLA 247 (452)
T ss_dssp TTEEEEETCCEEEEEECS----S---CEEEEE--SSC---EEEESEEEECSCCBCCCS
T ss_pred cCCEEEeCCEEEEEEccC----C---eEEEEE--CCC---EEEeCEEEECcCCCCChH
Confidence 489999999888886311 1 345555 232 689999999999885544
No 71
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=43.26 E-value=27 Score=27.02 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=33.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+|+.+++-++|..- ..+|++++.- .. ..++.|.||-|+|....
T Consensus 425 ~Gv~i~~~t~V~~l~~~-------~~~v~V~t~~-G~--~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 425 NGMTCHYQHELQRLKRI-------DSQWQLTFGQ-SQ--AAKHHATVILATGHRLP 470 (689)
T ss_dssp TTCEEEESCCEEEEEEC-------SSSEEEEEC--CC--CCEEESEEEECCGGGTT
T ss_pred CCCEEEeCCeEeEEEEe-------CCeEEEEeCC-Cc--EEEECCEEEECCCcchh
Confidence 59999999999999741 1258877642 11 14789999999998643
No 72
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=43.13 E-value=39 Score=22.51 Aligned_cols=47 Identities=15% Similarity=0.154 Sum_probs=29.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGF 70 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~GF 70 (74)
.|++++. .+..++.. . ..+|++.. .+ ..+++|.||.|+|.+...+++
T Consensus 85 ~~v~~~~-~~v~~i~~-~------~~~~~v~~--~~---~~~~~~~li~AtG~~~~~~~i 131 (319)
T 3cty_A 85 YAKIREG-VEVRSIKK-T------QGGFDIET--ND---DTYHAKYVIITTGTTHKHLGV 131 (319)
T ss_dssp TSEEEET-CCEEEEEE-E------TTEEEEEE--SS---SEEEEEEEEECCCEEECCCCC
T ss_pred cCCEEEE-eeEEEEEE-e------CCEEEEEE--CC---CEEEeCEEEECCCCCcccCCC
Confidence 4677766 34444432 1 12587765 22 368999999999987655443
No 73
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=42.96 E-value=20 Score=27.24 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=34.5
Q ss_pred eeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 8 NQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 8 ALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
+.-.||+|+.+..-.+|+. ++ ++...|.++.. .+.....+..|.||-|+|....
T Consensus 265 ~~~~gv~i~~~t~v~~l~~--~~-~g~v~GV~~~~--~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 265 AVKRGTDIRLNSRVVRILE--DA-SGKVTGVLVKG--EYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHTTCEEESSEEEEEEEE--C---CCEEEEEEEE--TTTEEEEEECSEEEECCCCCTT
T ss_pred HHHcCCeEEecCEEEEEEE--CC-CCeEEEEEEEe--CCCcEEEEEcCEEEEeCCCCcc
Confidence 3346999999999999974 11 12345666653 2222234667889999987653
No 74
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=42.69 E-value=13 Score=26.45 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=27.9
Q ss_pred EEeEEEeeCceec---------eeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 10 VHGVEIHEGVGFE---------SLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 10 LLGVeIH~~V~F~---------~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
-.||+|+.+.+.+ ++.. .. .+|.+++ .+. .++.|.||.|+|-.+
T Consensus 184 ~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~------~~v~v~~--~~g---~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 184 GQGAGLLLNTRAELVPGGVRLHRLTV-TN------THQIVVH--ETR---QIRAGVIIVAAGAAG 236 (405)
T ss_dssp TTTCEEECSCEEEEETTEEEEECBCC--------------CB--CCE---EEEEEEEEECCGGGH
T ss_pred HCCCEEEcCCEEEeccccccccceEe-eC------CeEEEEE--CCc---EEECCEEEECCCccH
Confidence 3589999998888 7753 11 1454433 222 588999999999764
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=42.48 E-value=53 Score=21.15 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=21.1
Q ss_pred eeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 37 GWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 37 GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
+|++.+.-. ..+++|.||-|.|.+...+
T Consensus 88 ~~~v~~~~g----~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 88 EFIVEIDGG----RRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEEEETTS----CEEEEEEEEECCCCEEECC
T ss_pred eEEEEECCC----CEEEcCEEEECCCCCCCCC
Confidence 588877532 3689999999999886543
No 76
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=42.12 E-value=40 Score=22.78 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=30.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEE-EEcCCCCCCCccEEeEEEecCCCccccCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRA-VVSPPDHPVSQYEFNVLVGADGKRNTLEGF 70 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra-~~~P~~h~ls~~eFdvlIgAdG~rn~l~GF 70 (74)
+|++++.+. -.++.. . ..|++ .+. + -..+++|.||.|+|.+...+.+
T Consensus 84 ~~v~~~~~~-v~~i~~--~------~~~~v~~~~--~--g~~~~~d~lviAtG~~~~~~~i 131 (335)
T 2a87_A 84 FGADLRMED-VESVSL--H------GPLKSVVTA--D--GQTHRARAVILAMGAAARYLQV 131 (335)
T ss_dssp TTCEEECCC-EEEEEC--S------SSSEEEEET--T--SCEEEEEEEEECCCEEECCCCC
T ss_pred cCCEEEEee-EEEEEe--C------CcEEEEEeC--C--CCEEEeCEEEECCCCCccCCCC
Confidence 477777764 444443 1 14777 543 1 1368999999999987665543
No 77
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=41.53 E-value=34 Score=24.76 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=33.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .++. .+++.+. +. ..+++|.||-|.|.+...+
T Consensus 221 ~Gv~i~~~~~v~~i~~-~~~~-----~~~v~~~--~g--~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVK-NTDG-----SLTLELE--DG--RSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HSCEEECSCCEEEEEE-CTTS-----CEEEEET--TS--CEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEE-eCCc-----EEEEEEC--CC--cEEEcCEEEECCCCCcCCC
Confidence 5899999998888763 1111 2566664 22 2689999999999886554
No 78
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=39.63 E-value=46 Score=21.93 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=29.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccCCc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGF 70 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~GF 70 (74)
.|++++.+. ..++- +.. ..|++ .. +. ..+++|.||.|+|.+...+.+
T Consensus 75 ~~~~~~~~~-v~~i~-~~~------~~~~v-~~--~~--~~~~~~~lv~AtG~~~~~~~~ 121 (320)
T 1trb_A 75 FETEIIFDH-INKVD-LQN------RPFRL-NG--DN--GEYTCDALIIATGASARYLGL 121 (320)
T ss_dssp TTCEEECCC-EEEEE-CSS------SSEEE-EE--SS--CEEEEEEEEECCCEEECCCCC
T ss_pred CCCEEEEee-eeEEE-ecC------CEEEE-Ee--CC--CEEEcCEEEECCCCCcCCCCC
Confidence 467777774 45543 221 24776 32 11 368899999999987655443
No 79
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=39.37 E-value=32 Score=25.05 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=34.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .. .++++.+... +.....+++|.||-|.|.+-..+
T Consensus 223 ~gV~i~~~~~v~~i~~-~~------~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 223 EGIRVRTKTKAVGYEK-KK------DGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TTCEEECSEEEEEEEE-ET------TEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred cCCEEEcCCEEEEEEE-eC------CEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 4899999988888753 11 1466666521 12223678999999999875543
No 80
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=39.00 E-value=30 Score=25.29 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=33.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+|+.+..-+++.. .. .++++.+. +. ..+++|.||-|.|.+...+
T Consensus 245 ~Gv~i~~~~~V~~i~~-~~------~~v~v~~~--~g--~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 245 KGISIIYEATVSQVQS-TE------NCYNVVLT--NG--QTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HTCEEESSCCEEEEEE-CS------SSEEEEET--TS--CEEEESEEEECCCEEECCT
T ss_pred CCCEEEeCCEEEEEEe-eC------CEEEEEEC--CC--cEEEcCEEEEeeCCCcCCC
Confidence 4899999998888864 11 14666664 22 3688999999999875443
No 81
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=38.57 E-value=25 Score=25.32 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=33.7
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCC-CCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPP-DHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~-~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+.+-.++.+ .. .+.++.+... +..-...++|.||-|.|.+-..
T Consensus 231 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 231 QGMKFKLKTKVVGVDT-SG------DGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp SSCCEECSEEEEEEEC-SS------SSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred cCCEEEeCCEEEEEEE-cC------CeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 4899999999888863 11 1356665421 2223467899999999987543
No 82
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=37.88 E-value=21 Score=25.15 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=32.6
Q ss_pred eeEEeEEEeeCc---eeceeeCCCCCCCcCceeeE-EEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 8 NQVHGVEIHEGV---GFESLLPPPSNQDEEKIGWR-AVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 8 ALLLGVeIH~~V---~F~~L~eP~~~~~~~~~GWr-a~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
|.-+||+|+.+. ..++|.. + ..+|+ +++. .. ..+..|.||.|+|-..
T Consensus 171 a~~~Gv~i~~~t~~~~V~~i~~--~-----~~~v~gV~t~-~G---~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 171 AQRMGVKFVTGTPQGRVVTLIF--E-----NNDVKGAVTA-DG---KIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHTTCEEEESTTTTCEEEEEE--E-----TTEEEEEEET-TT---EEEECSEEEECCGGGG
T ss_pred HHhcCCEEEeCCcCceEEEEEe--c-----CCeEEEEEEC-CC---CEEECCEEEECCCCCh
Confidence 334699999999 9999874 1 12577 5543 22 2578899999998754
No 83
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=37.62 E-value=27 Score=27.15 Aligned_cols=45 Identities=18% Similarity=0.024 Sum_probs=32.5
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
.||+|+.+...+++.. .. . ..|.+.+.- . ..++.|.||.|+|.+.
T Consensus 233 ~Gv~I~~~t~V~~I~~-~~-~----~v~gV~l~~--G--~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 233 LGGEIRFSTRVDDLHM-ED-G----QITGVTLSN--G--EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp TTCEEESSCCEEEEEE-SS-S----BEEEEEETT--S--CEEECSCEEECCCTTC
T ss_pred cCCEEEeCCEEEEEEE-eC-C----EEEEEEECC--C--CEEECCEEEECCCCCh
Confidence 5999999999999864 11 1 135566642 1 2588999999999986
No 84
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=36.67 E-value=32 Score=24.89 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=33.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .. .+.++.+.-.+. -...++|.||-|-|.+-..+
T Consensus 234 ~Gv~v~~~~~v~~i~~-~~------~~~~v~~~~~~g-~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 234 QGLKILLGARVTGTEV-KN------KQVTVKFVDAEG-EKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp TTEEEEETCEEEEEEE-CS------SCEEEEEESSSE-EEEEEESEEEECSCEEECCT
T ss_pred CCCEEEECCEEEEEEE-cC------CEEEEEEEeCCC-cEEEECCEEEEeeCCcccCC
Confidence 4899999988888764 11 135566553322 23578999999999875443
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=33.70 E-value=48 Score=25.17 Aligned_cols=41 Identities=20% Similarity=0.218 Sum_probs=27.7
Q ss_pred EEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCC
Q psy4053 14 EIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGK 63 (74)
Q Consensus 14 eIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~ 63 (74)
+|+.+.+-.++.. .++ ...|++.+.-. ..+++|.||.|+|-
T Consensus 105 ~i~~~~~V~~i~~-~~~----~~~~~V~~~~G----~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALY-LDD----ENLWEVTTDHG----EVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEE-ETT----TTEEEEEETTS----CEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEE-eCC----CCEEEEEEcCC----CEEEeCEEEECCcc
Confidence 5677776666642 221 23799988532 25899999999994
No 86
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=32.93 E-value=40 Score=24.33 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=32.7
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+..-+++.. .. .+.++.+.. +..-..+++|.||-|.|.+-..
T Consensus 225 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~~-~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 225 LGVTILTATKVESIAD-GG------SQVTVTVTK-DGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HTCEEECSCEEEEEEE-CS------SCEEEEEES-SSCEEEEEESEEEECSCEEECC
T ss_pred cCCEEEeCcEEEEEEE-cC------CeEEEEEEc-CCceEEEEcCEEEECCCCCccC
Confidence 4899999998888763 11 135555541 2222457899999999987543
No 87
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=31.02 E-value=17 Score=24.35 Aligned_cols=10 Identities=10% Similarity=0.700 Sum_probs=6.3
Q ss_pred CCccEEeEEE
Q psy4053 49 VSQYEFNVLV 58 (74)
Q Consensus 49 ls~~eFdvlI 58 (74)
+++++|||+|
T Consensus 2 Mte~~yDvvI 11 (312)
T 4gcm_A 2 MTEIDFDIAI 11 (312)
T ss_dssp --CCSEEEEE
T ss_pred CCCCCCCEEE
Confidence 4678899765
No 88
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=30.44 E-value=46 Score=24.25 Aligned_cols=48 Identities=21% Similarity=0.242 Sum_probs=32.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .. .+.++.+. +... ..++|.||-|.|.+...+
T Consensus 220 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~--~G~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 220 QGIETHLEFAVAALER-DA------QGTTLVAQ--DGTR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp TTCEEESSCCEEEEEE-ET------TEEEEEET--TCCE-EEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEE-eC------CeEEEEEe--CCcE-EEEcCEEEECCCCCcCCC
Confidence 4899999988887753 11 14666664 2211 589999999999875443
No 89
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=29.64 E-value=27 Score=25.75 Aligned_cols=50 Identities=18% Similarity=0.070 Sum_probs=34.3
Q ss_pred eEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcC-CCCCCCccEEeEEEecCCCcc
Q psy4053 9 QVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 9 LLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P-~~h~ls~~eFdvlIgAdG~rn 65 (74)
.-.|++|+.+.+-+++.. ++ ..|.+.+.- .+.....++.|.||.|+|-..
T Consensus 160 ~~~Gv~i~~~~~V~~l~~--~~-----~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARR--EN-----GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHTTCEEECSEEEEEEEE--ET-----TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHcCCEEEcCcEEEEEEE--eC-----CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 345899999999999874 11 268887752 122222477899999999754
No 90
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=29.47 E-value=17 Score=26.91 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=33.1
Q ss_pred eeeeEEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEe-EEEecCCCcc
Q psy4053 6 VVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFN-VLVGADGKRN 65 (74)
Q Consensus 6 KVALLLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFd-vlIgAdG~rn 65 (74)
+-|.=.||+|+.++.-++|+. +.++...|-+++. +...-.+..| .||-|.|.-.
T Consensus 210 ~~~~~~Gv~i~~~t~v~~L~~---~~~g~v~GV~~~~---~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 210 ETAEKLGVRAEYDMRVQTLVT---DDTGRVVGIVAKQ---YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHTTCEEECSEEEEEEEE---CTTCCEEEEEEEE---TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHcCCEEEecCEeEEEEE---CCCCcEEEEEEEE---CCcEEEEEeCCeEEEeCCChh
Confidence 333346999999999999985 1123355666553 2222246776 6666777654
No 91
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=28.94 E-value=39 Score=25.11 Aligned_cols=51 Identities=16% Similarity=0.161 Sum_probs=33.9
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+..-+++.. ..+ +...|+++++. +.. ..+++|.||-|.|.+-..
T Consensus 268 ~GV~i~~~~~V~~i~~-~~~--~~v~~~~v~~~--~G~-~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEE-DAN--GRVQAVVAMTP--NGE-MRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp TTCEEESSCEEEEEEE-CTT--SBEEEEEEEET--TEE-EEEECSCEEECCCCEECC
T ss_pred CCcEEEECCEEEEEEE-cCC--CceEEEEEEEC--CCc-EEEEcCEEEECcCCccCC
Confidence 5899999999988863 111 11234777764 221 157899999999987543
No 92
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=27.69 E-value=77 Score=23.28 Aligned_cols=48 Identities=10% Similarity=0.174 Sum_probs=33.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .++ ..+++.+. +. ..+++|.||-|.|.+-..+
T Consensus 244 ~GV~i~~~~~v~~i~~-~~~-----~~~~v~~~--~G--~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 244 NGINVRTHENPAKVTK-NAD-----GTRHVVFE--SG--AEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp TTEEEEETCCEEEEEE-CTT-----SCEEEEET--TS--CEEEESEEEECSCEEESCT
T ss_pred CCCEEEeCCEEEEEEE-cCC-----CEEEEEEC--CC--cEEEcCEEEEccCCCcCcc
Confidence 5899999998888863 111 12566664 22 2689999999999875443
No 93
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=25.81 E-value=1e+02 Score=22.33 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=32.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+||.+..-+++.. .. .+.++.+.-.+..=...++|.||-|.|.+-.
T Consensus 239 ~gV~i~~~~~v~~i~~-~~------~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEP-KE------DGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp GEEEEECSCEEEEEEE-ET------TEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred cCCEEEECCEEEEEEE-cC------CeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 5999999999888753 11 1455665410111135789999999998744
No 94
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=25.28 E-value=1e+02 Score=20.01 Aligned_cols=45 Identities=7% Similarity=-0.029 Sum_probs=27.4
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
|++++. .+-.++.. .. ..|.+...- -..+++|.||-|.|.+...+
T Consensus 84 ~v~~~~-~~v~~i~~-~~------~~~~v~~~~----g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 84 EVPVLL-DIVEKIEN-RG------DEFVVKTKR----KGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp TCCEEE-SCEEEEEE-C--------CEEEEESS----SCEEEEEEEEECCCCEECCC
T ss_pred CCEEEE-EEEEEEEe-cC------CEEEEEECC----CCEEEcCEEEECcCCCCccC
Confidence 566666 44455542 11 247776642 13789999999999875443
No 95
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=24.97 E-value=62 Score=23.36 Aligned_cols=44 Identities=20% Similarity=0.235 Sum_probs=30.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
.||+|+.+..-+++... + ...++.+. +. ..+++|.||-|.|.+-
T Consensus 215 ~GV~i~~~~~v~~i~~~--~-----~~v~v~~~--~g--~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGE--N-----GKVARVIT--DK--RTLDADLVILAAGVSP 258 (472)
T ss_dssp TTCEEECSCCEEEEEES--S-----SBEEEEEE--SS--CEEECSEEEECSCEEE
T ss_pred cCCEEEeCCEEEEEEcc--C-----CeEEEEEe--CC--CEEEcCEEEECCCCCc
Confidence 58999999888888641 1 13445543 22 2688999999999873
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=24.20 E-value=1e+02 Score=19.95 Aligned_cols=44 Identities=11% Similarity=-0.114 Sum_probs=28.4
Q ss_pred eEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 12 GVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
||+|+ +.+.+++.. .. ..-|.+.+. +. ..++.|.||.|+|.+..
T Consensus 83 gv~i~-~~~v~~i~~-~~-----~~v~~v~~~--~g--~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 83 PLHLF-QATATGLLL-EG-----NRVVGVRTW--EG--PPARGEKVVLAVGSFLG 126 (232)
T ss_dssp TEEEE-ECCEEEEEE-ET-----TEEEEEEET--TS--CCEECSEEEECCTTCSS
T ss_pred CcEEE-EeEEEEEEE-eC-----CEEEEEEEC--CC--CEEECCEEEECCCCChh
Confidence 88888 457777763 11 112555553 22 26889999999998544
No 97
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=23.44 E-value=32 Score=25.64 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=24.4
Q ss_pred eeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 37 GWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 37 GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
.|.+.+.-.....++||++|+|-.||...
T Consensus 311 ~~~vl~t~dg~~~Aq~EhTvlvt~~G~ei 339 (401)
T 2q8k_A 311 PFNVLYEKEGEFVAQFKFTVLLMPNGPMR 339 (401)
T ss_dssp EECCEECCTTCCEEEEEEEEEEETTEEEE
T ss_pred CCCceEeeCCCEEEEEEEEEEECCCCcEE
Confidence 48887777788999999999999998643
No 98
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=23.10 E-value=83 Score=23.88 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=27.0
Q ss_pred EEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCC
Q psy4053 14 EIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGK 63 (74)
Q Consensus 14 eIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~ 63 (74)
+|+.+.+-+++.. .++ ...|++.+.-. ..+++|.||.|+|-
T Consensus 117 ~i~~~~~V~~i~~-~~~----~~~w~V~~~~G----~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 117 DIRFDTRVTSAVL-DEE----GLRWTVRTDRG----DEVSARFLVVAAGP 157 (549)
T ss_dssp GEECSCCEEEEEE-ETT----TTEEEEEETTC----CEEEEEEEEECCCS
T ss_pred cEEECCEEEEEEE-cCC----CCEEEEEECCC----CEEEeCEEEECcCC
Confidence 5666666666642 111 23799988522 25899999999993
No 99
>3h3i_A Putative lipid binding protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.02 E-value=29 Score=23.83 Aligned_cols=36 Identities=22% Similarity=0.435 Sum_probs=30.2
Q ss_pred eEEEEcCCCCCCCccEEeEEEec--CCCccccCCcccc
Q psy4053 38 WRAVVSPPDHPVSQYEFNVLVGA--DGKRNTLEGFKSS 73 (74)
Q Consensus 38 Wra~~~P~~h~ls~~eFdvlIgA--dG~rn~l~GF~rk 73 (74)
=-+...|+..|.-.-.|.+-.+- .|+..++.||+|-
T Consensus 106 ~~~attp~g~p~DsIvf~v~~sdd~~GktY~v~G~RrT 143 (150)
T 3h3i_A 106 EKAATTPSGMPADSIVYMVQFDDDEDGLTYKVSGFRRT 143 (150)
T ss_dssp EEEEECTTSCEEEEEEEEEEETTCTTCCCEEEEEEECC
T ss_pred eccccCCCCCccceEEEEEEeccCCCCCEEEEeeEecc
Confidence 44567899999988899988877 6999999999984
No 100
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=22.86 E-value=80 Score=22.77 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=32.3
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCcee-eEEEEcC-CCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIG-WRAVVSP-PDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~G-Wra~~~P-~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+..-+++.. ..+ + +++.+.. .+..-..+++|.||-|.|.+-..
T Consensus 233 ~Gv~i~~~~~v~~i~~-~~~------~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 233 QGFKFKLNTKVTGATK-KSD------GKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp TTCEEECSEEEEEEEE-CTT------SCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred CCCEEEeCceEEEEEE-cCC------ceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 4899999998888763 211 2 5555431 01122357899999999988443
No 101
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.77 E-value=44 Score=24.02 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=32.4
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++.. .. .+.++.+.. +.--..+++|.||-|.|.+-..+
T Consensus 224 ~gv~i~~~~~v~~i~~-~~------~~~~v~~~~-~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEE-RE------DGVTVTYEA-NGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp TTCEEEESEEEEEEEE-ET------TEEEEEEEE-TTEEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCEEEEEEE-eC------CeEEEEEEe-CCceeEEEcCEEEECcCCCcccC
Confidence 4899999988887753 11 135565542 11123578999999999885443
No 102
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=22.16 E-value=95 Score=22.87 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=32.6
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+..-+++.. ..+ ...++.+. +. ...++|.||-|.|.+-..
T Consensus 248 ~GV~i~~~~~v~~i~~-~~~-----~~~~v~~~--~G--~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 248 NGIEIMTNENPAKVSL-NTD-----GSKHVTFE--SG--KTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp TTCEEEESCCEEEEEE-CTT-----SCEEEEET--TS--CEEEESEEEECSCEEECC
T ss_pred CCCEEEeCCEEEEEEE-cCC-----ceEEEEEC--CC--cEEEcCEEEECCCCcccc
Confidence 4899999998888753 111 12566664 22 268999999999987544
No 103
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=21.61 E-value=28 Score=25.07 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.9
Q ss_pred EEeEEEecCCCcccc
Q psy4053 53 EFNVLVGADGKRNTL 67 (74)
Q Consensus 53 eFdvlIgAdG~rn~l 67 (74)
++|+||+|||.++..
T Consensus 155 ~ad~VV~AdG~~S~~ 169 (430)
T 3ihm_A 155 QYDLLVVCTGKYALG 169 (430)
T ss_dssp TSSEEEECCCCTTGG
T ss_pred cCCEEEECCCCcchH
Confidence 589999999998765
No 104
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=21.61 E-value=74 Score=22.93 Aligned_cols=53 Identities=19% Similarity=0.166 Sum_probs=33.1
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcC-CCCCCCccEEeEEEecCCCccccC
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLE 68 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P-~~h~ls~~eFdvlIgAdG~rn~l~ 68 (74)
.||+||.+..-+++..-. +. .++++.+.. .+..-..+++|.||-|.|.+-..+
T Consensus 237 ~gv~i~~~~~v~~i~~~~-~~----~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 237 QGLDFKLSTKVISAKRND-DK----NVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TTCEEECSEEEEEEEEET-TT----TEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred CCCEEEeCCEEEEEEEec-CC----CeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 489999998888875310 11 146666541 011123578999999999875443
No 105
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=21.45 E-value=57 Score=23.80 Aligned_cols=48 Identities=13% Similarity=0.177 Sum_probs=31.2
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+||.+..-+++.. .++. ...++.+. +.. ...++|.||-|.|.+-.
T Consensus 239 ~Gv~i~~~~~v~~i~~-~~~~----~~~~v~~~--~G~-~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEK-NVET----DKLKIHMN--DSK-SIDDVDELIWTIGRKSH 286 (479)
T ss_dssp HTCEEECSCCEEEEEE-CC-C----CCEEEEET--TSC-EEEEESEEEECSCEEEC
T ss_pred CCeEEEeCCEEEEEEE-cCCC----cEEEEEEC--CCc-EEEEcCEEEECCCCCCc
Confidence 4899999998888753 1111 01445553 222 46789999999998643
No 106
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=20.81 E-value=98 Score=22.11 Aligned_cols=45 Identities=20% Similarity=0.232 Sum_probs=31.0
Q ss_pred EeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcccc
Q psy4053 11 HGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTL 67 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~l 67 (74)
.||+||.+..-+++.. . + ..+.+.+. + ..+++|.||-|.|.+-..
T Consensus 204 ~gv~i~~~~~v~~i~~-~-~-----~v~~v~~~--~---~~i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 204 NNITIATGETVERYEG-D-G-----RVQKVVTD--K---NAYDADLVVVAVGVRPNT 248 (447)
T ss_dssp TTEEEEESCCEEEEEC-S-S-----BCCEEEES--S---CEEECSEEEECSCEEESC
T ss_pred CCCEEEcCCEEEEEEc-c-C-----cEEEEEEC--C---CEEECCEEEECcCCCCCh
Confidence 5899999998888863 1 1 12444442 2 357899999999987543
No 107
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.74 E-value=1.5e+02 Score=22.62 Aligned_cols=52 Identities=19% Similarity=0.119 Sum_probs=33.7
Q ss_pred EEeEEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCcc
Q psy4053 10 VHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRN 65 (74)
Q Consensus 10 LLGVeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn 65 (74)
-.||+|+.+..-.+|+.- .++...|-.+.-. .+.....+.-+.||-|+|...
T Consensus 155 ~~gv~i~~~~~v~~L~~~---~~g~v~Gv~~~~~-~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 155 KNHTTIFSEWYALDLVKN---QDGAVVGCTALCI-ETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HTTCEEEETEEEEEEEEC---TTSCEEEEEEEET-TTCCEEEEEEEEEEECCCCCG
T ss_pred hCCCEEEeCcEEEEEEEC---CCCEEEEEEEEEc-CCCeEEEEEcCEEEECCCCCc
Confidence 359999999999999841 1123455555422 233334567889999998754
No 108
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=20.47 E-value=1.8e+02 Score=20.76 Aligned_cols=41 Identities=12% Similarity=0.027 Sum_probs=29.8
Q ss_pred EEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEeEEEecCCCc
Q psy4053 13 VEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKR 64 (74)
Q Consensus 13 VeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~r 64 (74)
++|+.|..-+++.. .. .+|++.+. +. ..+++|.||.|-|-.
T Consensus 271 ~~i~~~~~V~~i~~-~~------~~v~v~~~--~g--~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 271 LGYVFGCPVRSVVN-ER------DAARVTAR--DG--REFVAKRVVCTIPLN 311 (495)
T ss_dssp EEEESSCCEEEEEE-CS------SSEEEEET--TC--CEEEEEEEEECCCGG
T ss_pred eEEEeCCEEEEEEE-cC------CEEEEEEC--CC--CEEEcCEEEECCCHH
Confidence 89999999999863 11 25777664 22 258999999998854
No 109
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=20.43 E-value=57 Score=20.84 Aligned_cols=48 Identities=23% Similarity=0.352 Sum_probs=33.5
Q ss_pred EEEeeCceeceeeCCCCCCCcCceeeEEEEcCCCCCCCccEEe--EEEecC
Q psy4053 13 VEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFN--VLVGAD 61 (74)
Q Consensus 13 VeIH~~V~F~~L~eP~~~~~~~~~GWra~~~P~~h~ls~~eFd--vlIgAd 61 (74)
.|+-.+=+|..|..... ++..-.||++.-.-.+.+...|.|. .++.|.
T Consensus 12 ~e~d~~g~fV~l~N~s~-~~~~L~gW~l~r~v~~~~~~~y~Fp~~~~L~pg 61 (121)
T 1ifr_A 12 EEVDEEGKFVRLRNKSN-EDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAG 61 (121)
T ss_dssp EEECTTSSEEEEEECSS-SCEECTTCEEEEEETTSCCEEEECCSSCEECTT
T ss_pred EEECCCCCEEEEEeCCC-CccccCCCEEEEEcCCCccEEEEeCCCcEECCC
Confidence 35666778999998655 4445889999887555566788883 555543
No 110
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=20.30 E-value=92 Score=22.86 Aligned_cols=52 Identities=17% Similarity=0.211 Sum_probs=30.9
Q ss_pred EeEEEeeCceeceeeCCC----------CCC--CcCceeeEEEEcCCCCCCCccEEeEEEecCCCccc
Q psy4053 11 HGVEIHEGVGFESLLPPP----------SNQ--DEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNT 66 (74)
Q Consensus 11 LGVeIH~~V~F~~L~eP~----------~~~--~~~~~GWra~~~P~~h~ls~~eFdvlIgAdG~rn~ 66 (74)
.||+||.+..-+++..-+ ... .....+.++.+ .+. ...++|.||-|-|.+-.
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g--~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL--SNG--ELLETDLLIMAIGVRPE 268 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE--TTS--CEEEESEEEECSCEEEC
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE--cCC--CEEEcCEEEECcCCccc
Confidence 489999988877775310 000 00012344444 333 26899999999998744
Done!