Your job contains 1 sequence.
>psy4053
MNIEYVVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGA
DGKRNTLEGFKSSL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4053
(74 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E9PP85 - symbol:MICAL3 "Protein-methionine sulf... 218 6.8e-18 1
UNIPROTKB|E9PTS8 - symbol:E9PTS8 "Uncharacterized protein... 217 1.2e-16 1
UNIPROTKB|E1BXR9 - symbol:Gga.14596 "Uncharacterized prot... 215 2.2e-16 1
UNIPROTKB|Q7RTP6 - symbol:MICAL3 "Protein-methionine sulf... 218 3.0e-16 1
UNIPROTKB|F1Q009 - symbol:MICAL3 "Uncharacterized protein... 217 3.4e-16 1
UNIPROTKB|F1SHR1 - symbol:MICAL3 "Uncharacterized protein... 217 3.7e-16 1
MGI|MGI:2442733 - symbol:Mical3 "microtubule associated m... 217 3.8e-16 1
UNIPROTKB|F1Q0K3 - symbol:MICAL3 "Uncharacterized protein... 217 3.9e-16 1
UNIPROTKB|G3MWR8 - symbol:MICAL3 "Protein-methionine sulf... 215 6.1e-16 1
UNIPROTKB|E1C3Y4 - symbol:E1C3Y4 "Uncharacterized protein... 210 7.1e-16 1
UNIPROTKB|E2QX90 - symbol:MICAL2 "Uncharacterized protein... 207 4.3e-15 1
UNIPROTKB|F1MF74 - symbol:MICAL2 "Protein-methionine sulf... 203 5.6e-15 1
UNIPROTKB|H9GW33 - symbol:MICAL2 "Protein-methionine sulf... 203 5.6e-15 1
UNIPROTKB|O94851 - symbol:MICAL2 "Protein-methionine sulf... 202 7.4e-15 1
ZFIN|ZDB-GENE-050126-2 - symbol:mical3a "microtubule asso... 202 1.7e-14 1
ZFIN|ZDB-GENE-050211-1 - symbol:mical3b "microtubule asso... 199 2.5e-14 1
MGI|MGI:2444947 - symbol:Mical2 "microtubule associated m... 194 4.3e-14 1
RGD|1311773 - symbol:Mical2 "microtubule associated monox... 188 1.9e-13 1
UNIPROTKB|H9KVG1 - symbol:Mical2 "Protein-methionine sulf... 188 2.2e-13 1
ZFIN|ZDB-GENE-061207-15 - symbol:mical2b "microtubule ass... 190 2.3e-13 1
FB|FBgn0053208 - symbol:Mical "Molecule interacting with ... 176 2.2e-11 1
ZFIN|ZDB-GENE-081022-3 - symbol:mical1 "microtubule assoc... 136 8.9e-08 1
UNIPROTKB|Q5TED7 - symbol:MICAL1 "Protein-methionine sulf... 124 1.2e-07 1
UNIPROTKB|Q8TDZ2 - symbol:MICAL1 "Protein-methionine sulf... 124 1.4e-06 1
UNIPROTKB|F1MH07 - symbol:MICAL1 "Protein-methionine sulf... 120 3.9e-06 1
UNIPROTKB|F1RZP9 - symbol:MICAL1 "Uncharacterized protein... 120 3.9e-06 1
MGI|MGI:2385847 - symbol:Mical1 "microtubule associated m... 119 4.8e-06 1
RGD|1309386 - symbol:Mical1 "microtubule associated monox... 117 7.9e-06 1
>UNIPROTKB|E9PP85 [details] [associations]
symbol:MICAL3 "Protein-methionine sulfoxide oxidase MICAL3"
species:9606 "Homo sapiens" [GO:0016491 "oxidoreductase activity"
evidence=IEA] InterPro:IPR003042 PRINTS:PR00420 InterPro:IPR002938
Pfam:PF01494 GO:GO:0016491 GO:GO:0055114 EMBL:AC016026
EMBL:AC016027 HGNC:HGNC:24694 ChiTaRS:MICAL3 IPI:IPI01010424
ProteinModelPortal:E9PP85 SMR:E9PP85 Ensembl:ENST00000495076
ArrayExpress:E9PP85 Bgee:E9PP85 Uniprot:E9PP85
Length = 335
Score = 218 (81.8 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|E9PTS8 [details] [associations]
symbol:E9PTS8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0046872 GO:GO:0008270 GO:GO:0016491
Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0055114
IPI:IPI00358419 Ensembl:ENSRNOT00000017079 ArrayExpress:E9PTS8
Uniprot:E9PTS8
Length = 826
Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|E1BXR9 [details] [associations]
symbol:Gga.14596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0046872 GO:GO:0008270 GO:GO:0016491
Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0055114
GeneTree:ENSGT00640000091174 OMA:PQWKQGS EMBL:AADN02006530
EMBL:AADN02006531 IPI:IPI00680048 Ensembl:ENSGALT00000021288
Uniprot:E1BXR9
Length = 899
Score = 215 (80.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVYPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|Q7RTP6 [details] [associations]
symbol:MICAL3 "Protein-methionine sulfoxide oxidase MICAL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0030042 "actin filament depolymerization" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS] [GO:0003779
"actin binding" evidence=ISS] [GO:0071949 "FAD binding"
evidence=ISS] [GO:0016709 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
NAD(P)H as one donor, and incorporation of one atom of oxygen"
evidence=ISS] Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0005737 GO:GO:0003779
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0030042 GO:GO:0071949 eggNOG:COG5069 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0006887 GO:GO:0016709 InterPro:IPR022735
Pfam:PF12130 HOGENOM:HOG000047263 CTD:57553 EMBL:CR456364
EMBL:BX647382 EMBL:AC016026 EMBL:AC016027 EMBL:BC006562
EMBL:BC085009 EMBL:BC157876 EMBL:BC171887 EMBL:AB020626
EMBL:AB037785 EMBL:BK000464 EMBL:BK000465 IPI:IPI00177937
IPI:IPI00480203 IPI:IPI00741791 IPI:IPI00896430 IPI:IPI00969176
RefSeq:NP_001116203.1 RefSeq:NP_001129476.1 RefSeq:NP_056056.2
UniGene:Hs.528024 PDB:2D88 PDBsum:2D88 ProteinModelPortal:Q7RTP6
SMR:Q7RTP6 IntAct:Q7RTP6 PhosphoSite:Q7RTP6 DMDM:300669653
PaxDb:Q7RTP6 PeptideAtlas:O94909 PRIDE:Q7RTP6 DNASU:57553
Ensembl:ENST00000207726 Ensembl:ENST00000383094
Ensembl:ENST00000400561 Ensembl:ENST00000414725
Ensembl:ENST00000429452 Ensembl:ENST00000441493
Ensembl:ENST00000444520 Ensembl:ENST00000585038 GeneID:57553
KEGG:hsa:57553 UCSC:uc002zng.4 UCSC:uc002znh.2 UCSC:uc002znj.1
UCSC:uc002znk.1 GeneCards:GC22M018270 GeneCards:GC22M018271
H-InvDB:HIX0213260 HGNC:HGNC:24694 HPA:HPA000639 HPA:HPA003421
MIM:608882 neXtProt:NX_Q7RTP6 PharmGKB:PA142671454
HOVERGEN:HBG081827 InParanoid:O94909 OMA:PQWKQGS ChiTaRS:MICAL3
EvolutionaryTrace:Q7RTP6 GenomeRNAi:57553 NextBio:64022
ArrayExpress:Q7RTP6 Bgee:Q7RTP6 CleanEx:HS_MICAL3
Genevestigator:Q7RTP6 GermOnline:ENSG00000093100 Uniprot:Q7RTP6
Length = 2002
Score = 218 (81.8 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|F1Q009 [details] [associations]
symbol:MICAL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0046872 GO:GO:0008270
GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0055114 GeneTree:ENSGT00640000091174 EMBL:AAEX03015345
Ensembl:ENSCAFT00000025740 Uniprot:F1Q009
Length = 1821
Score = 217 (81.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|F1SHR1 [details] [associations]
symbol:MICAL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0046872 GO:GO:0008270 GO:GO:0016491
Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0055114
InterPro:IPR022735 Pfam:PF12130 GeneTree:ENSGT00640000091174
OMA:HLYDTGD EMBL:CU424457 Ensembl:ENSSSCT00000000834 Uniprot:F1SHR1
Length = 1949
Score = 217 (81.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>MGI|MGI:2442733 [details] [associations]
symbol:Mical3 "microtubule associated monooxygenase,
calponin and LIM domain containing 3" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003779 "actin
binding" evidence=IEA] [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420
PROSITE:PS00478 PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033
SMART:SM00132 InterPro:IPR002938 Pfam:PF01494 MGI:MGI:2442733
GO:GO:0005737 GO:GO:0003779 GO:GO:0005856 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949
eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0006887
GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 HOGENOM:HOG000047263 CTD:57553
HOVERGEN:HBG081827 OMA:PQWKQGS ChiTaRS:MICAL3 EMBL:AF536756
EMBL:AK173033 EMBL:AK122497 EMBL:AC079443 EMBL:AC083894
EMBL:BC138257 EMBL:AK132669 EMBL:AK147803 EMBL:AK048201
IPI:IPI00229906 IPI:IPI00890125 IPI:IPI00956923 IPI:IPI00968905
RefSeq:NP_001257404.1 RefSeq:NP_700445.2 UniGene:Mm.122399
ProteinModelPortal:Q8CJ19 SMR:Q8CJ19 IntAct:Q8CJ19
PhosphoSite:Q8CJ19 PaxDb:Q8CJ19 PRIDE:Q8CJ19
Ensembl:ENSMUST00000077159 GeneID:194401 KEGG:mmu:194401
UCSC:uc009dnx.1 UCSC:uc009doa.1 InParanoid:Q8CJ19 OrthoDB:EOG4TXBR4
NextBio:371593 Bgee:Q8CJ19 Genevestigator:Q8CJ19
GermOnline:ENSMUSG00000003178 Uniprot:Q8CJ19
Length = 1993
Score = 217 (81.4 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|F1Q0K3 [details] [associations]
symbol:MICAL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0046872 GO:GO:0008270
GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0055114 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 CTD:57553 OMA:HLYDTGD
EMBL:AAEX03015345 RefSeq:XP_543888.3 Ensembl:ENSCAFT00000025716
GeneID:486761 KEGG:cfa:486761 Uniprot:F1Q0K3
Length = 2016
Score = 217 (81.4 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFQGLVQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|G3MWR8 [details] [associations]
symbol:MICAL3 "Protein-methionine sulfoxide oxidase MICAL3"
species:9913 "Bos taurus" [GO:0016709 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, NAD(P)H as one donor, and incorporation of one
atom of oxygen" evidence=ISS] [GO:0071949 "FAD binding"
evidence=ISS] [GO:0003779 "actin binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0030042 "actin
filament depolymerization" evidence=ISS] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006887
"exocytosis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0005737 GO:GO:0003779
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0030042 GO:GO:0071949 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0006887 GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 EMBL:DAAA02014628 EMBL:DAAA02014629
RefSeq:XP_002687965.2 UniGene:Bt.105026 Ensembl:ENSBTAT00000065648
GeneID:532244 KEGG:bta:532244 CTD:57553 OMA:HLYDTGD Uniprot:G3MWR8
Length = 1960
Score = 215 (80.7 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F L+ PP +Q+ E+IGWRA+V P HPVS+YEF V++G DG+RNTLEGF+
Sbjct: 174 GIEIHVNVEFRGLVEPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFR 233
>UNIPROTKB|E1C3Y4 [details] [associations]
symbol:E1C3Y4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0046872 GO:GO:0008270 GO:GO:0016491
Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0055114
GeneTree:ENSGT00640000091174 OMA:ACQGALA EMBL:AADN02030609
IPI:IPI00593019 Ensembl:ENSGALT00000008888 Uniprot:E1C3Y4
Length = 858
Score = 210 (79.0 bits), Expect = 7.1e-16, P = 7.1e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH + F +L PP +Q+ +KIGWRA P DHP+S+YEF+V++GADG+RNTLEGF+
Sbjct: 174 GVEIHVNLEFVKVLEPPEDQENQKIGWRAEFLPVDHPLSEYEFDVIIGADGRRNTLEGFR 233
>UNIPROTKB|E2QX90 [details] [associations]
symbol:MICAL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0046872 GO:GO:0008270
GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0055114 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 EMBL:AAEX03012916 EMBL:AAEX03012917
EMBL:AAEX03012918 Ensembl:ENSCAFT00000012580 Uniprot:E2QX90
Length = 1972
Score = 207 (77.9 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F +L PP +Q+ +KIGWRA P DHP+S +EF+V++GADG+RNTLEGF+
Sbjct: 174 GVEIHVNVEFVKVLEPPEDQENQKIGWRADFLPADHPLSDFEFDVIIGADGRRNTLEGFR 233
>UNIPROTKB|F1MF74 [details] [associations]
symbol:MICAL2 "Protein-methionine sulfoxide oxidase MICAL2"
species:9913 "Bos taurus" [GO:0016709 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, NAD(P)H as one donor, and incorporation of one
atom of oxygen" evidence=ISS] [GO:0071949 "FAD binding"
evidence=ISS] [GO:0003779 "actin binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0030042 "actin
filament depolymerization" evidence=ISS] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420
PROSITE:PS00478 PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033
SMART:SM00132 InterPro:IPR002938 Pfam:PF01494 GO:GO:0005737
GO:GO:0003779 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0016709 EMBL:DAAA02040675 EMBL:DAAA02040676
EMBL:DAAA02040677 EMBL:DAAA02040678 EMBL:DAAA02040679
IPI:IPI00700794 OMA:ACQGALA Uniprot:F1MF74
Length = 1101
Score = 203 (76.5 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 3 IEYVVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADG 62
I + V + GVEIH V F +L PP +Q+ +KIGWRA P DH +S++EF+V++GADG
Sbjct: 165 ILFKVALILGVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPVDHSLSEFEFDVIIGADG 224
Query: 63 KRNTLEGFK 71
+RNTLEGF+
Sbjct: 225 RRNTLEGFR 233
>UNIPROTKB|H9GW33 [details] [associations]
symbol:MICAL2 "Protein-methionine sulfoxide oxidase MICAL2"
species:9913 "Bos taurus" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0046872 GO:GO:0008270
GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0055114 GeneTree:ENSGT00640000091174 EMBL:DAAA02040675
EMBL:DAAA02040676 EMBL:DAAA02040677 EMBL:DAAA02040678
EMBL:DAAA02040679 OMA:ACQGALA Ensembl:ENSBTAT00000046258
Uniprot:H9GW33
Length = 1102
Score = 203 (76.5 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 3 IEYVVNQVHGVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADG 62
I + V + GVEIH V F +L PP +Q+ +KIGWRA P DH +S++EF+V++GADG
Sbjct: 166 ILFKVALILGVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPVDHSLSEFEFDVIIGADG 225
Query: 63 KRNTLEGFK 71
+RNTLEGF+
Sbjct: 226 RRNTLEGFR 234
>UNIPROTKB|O94851 [details] [associations]
symbol:MICAL2 "Protein-methionine sulfoxide oxidase MICAL2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0071949 "FAD binding"
evidence=ISS] [GO:0030042 "actin filament depolymerization"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] [GO:0003779 "actin binding" evidence=ISS] [GO:0016709
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of one atom of oxygen" evidence=ISS]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 GO:GO:0005737 GO:GO:0003779
EMBL:CH471064 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 eggNOG:COG5069
Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0016709
HOGENOM:HOG000047263 HOVERGEN:HBG052474 OMA:ACQGALA EMBL:AB110785
EMBL:AB110786 EMBL:AB018293 EMBL:AK294845 EMBL:AK302893
EMBL:BX538021 EMBL:BX641163 EMBL:AC025106 EMBL:AC079329
EMBL:BC044577 EMBL:BK000462 IPI:IPI00183018 IPI:IPI00414591
RefSeq:NP_055447.1 UniGene:Hs.501928 PDB:2E9K PDBsum:2E9K
ProteinModelPortal:O94851 SMR:O94851 IntAct:O94851 STRING:O94851
PhosphoSite:O94851 PaxDb:O94851 PRIDE:O94851
Ensembl:ENST00000256194 Ensembl:ENST00000342902
Ensembl:ENST00000379612 Ensembl:ENST00000527546
Ensembl:ENST00000537344 GeneID:9645 KEGG:hsa:9645 UCSC:uc001mjz.3
UCSC:uc001mkd.3 CTD:9645 GeneCards:GC11P012115 HGNC:HGNC:24693
HPA:HPA030437 MIM:608881 neXtProt:NX_O94851 PharmGKB:PA142671453
InParanoid:O94851 OrthoDB:EOG43BMN4 PhylomeDB:O94851 ChiTaRS:MICAL2
EvolutionaryTrace:O94851 GenomeRNAi:9645 NextBio:36203
ArrayExpress:O94851 Bgee:O94851 CleanEx:HS_MICAL2
Genevestigator:O94851 GermOnline:ENSG00000133816 Uniprot:O94851
Length = 1124
Score = 202 (76.2 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F +L PP +Q+ +KIGWRA P DH +S++EF+V++GADG+RNTLEGF+
Sbjct: 174 GVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPTDHSLSEFEFDVIIGADGRRNTLEGFR 233
>ZFIN|ZDB-GENE-050126-2 [details] [associations]
symbol:mical3a "microtubule associated monooxygenase,
calponin and LIM domain containing 3a" species:7955 "Danio rerio"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016709 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
NAD(P)H as one donor, and incorporation of one atom of oxygen"
evidence=ISS] [GO:0003779 "actin binding" evidence=IEA;ISS]
[GO:0071949 "FAD binding" evidence=ISS] [GO:0030042 "actin filament
depolymerization" evidence=ISS] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004497 "monooxygenase activity" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 ZFIN:ZDB-GENE-050126-2 GO:GO:0046872 GO:GO:0008270
GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0055114 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 EMBL:AL929264 EMBL:BX537323
Ensembl:ENSDART00000101026 Bgee:H9GXQ9 Uniprot:H9GXQ9
Length = 2269
Score = 202 (76.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
G+EIH V F+ L+ PP +Q+ E+IGWRA V P HPV++ EF+V++GADG+RNTL GF+
Sbjct: 178 GIEIHVNVEFKGLIEPPEDQENERIGWRAEVHPRTHPVNELEFDVIIGADGRRNTLSGFR 237
>ZFIN|ZDB-GENE-050211-1 [details] [associations]
symbol:mical3b "microtubule associated monooxygenase,
calponin and LIM domain containing 3b" species:7955 "Danio rerio"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA;ISS] [GO:0016709 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
NAD(P)H as one donor, and incorporation of one atom of oxygen"
evidence=ISS] [GO:0003779 "actin binding" evidence=IEA;ISS]
[GO:0071949 "FAD binding" evidence=ISS] [GO:0030042 "actin filament
depolymerization" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004497 "monooxygenase activity" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 InterPro:IPR003042
Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 ZFIN:ZDB-GENE-050211-1 GO:GO:0005737 GO:GO:0003779
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0030042 GO:GO:0071949 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0006887 GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
EMBL:BX901962 EMBL:BX649444 IPI:IPI00901952 UniGene:Dr.133371
UniGene:Dr.159419 UniGene:Dr.159714 UniGene:Dr.75142
Ensembl:ENSDART00000147699 GeneTree:ENSGT00640000091174
ArrayExpress:F1QWK4 Bgee:F1QWK4 Uniprot:F1QWK4
Length = 1673
Score = 199 (75.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H V F+ LL PP NQ E+++GWRA V P HPV Q EF+V++GADG+RNTL GF+
Sbjct: 173 GVEVHVNVEFKHLLEPPENQ-EKRVGWRAEVQPSSHPVRQLEFDVVIGADGRRNTLPGFR 231
>MGI|MGI:2444947 [details] [associations]
symbol:Mical2 "microtubule associated monooxygenase,
calponin and LIM domain containing 2" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003779 "actin
binding" evidence=IEA] [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 MGI:MGI:2444947 GO:GO:0005737
GO:GO:0003779 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 eggNOG:COG5069
Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0016709
GeneTree:ENSGT00640000091174 HOGENOM:HOG000047263
HOVERGEN:HBG052474 OMA:ACQGALA CTD:9645 OrthoDB:EOG43BMN4
ChiTaRS:MICAL2 EMBL:AK220353 EMBL:AK030608 EMBL:AK138935
EMBL:AK143191 EMBL:AK163078 EMBL:AC100153 EMBL:AC132392
EMBL:AC166834 EMBL:BC111895 EMBL:BC112415 IPI:IPI00223052
RefSeq:NP_001180234.1 RefSeq:NP_796256.1 UniGene:Mm.488195
UniGene:Mm.52312 ProteinModelPortal:Q8BML1 SMR:Q8BML1 STRING:Q8BML1
PhosphoSite:Q8BML1 PaxDb:Q8BML1 PRIDE:Q8BML1
Ensembl:ENSMUST00000037991 Ensembl:ENSMUST00000050149
Ensembl:ENSMUST00000106648 GeneID:320878 KEGG:mmu:320878
UCSC:uc009jgn.2 NextBio:397627 Bgee:Q8BML1 Genevestigator:Q8BML1
GermOnline:ENSMUSG00000038244 Uniprot:Q8BML1
Length = 960
Score = 194 (73.4 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H V F +L PP +Q+ +K+GWRA P DH +S +EF+V++GADG RNTLEGF+
Sbjct: 174 GVEVHVNVEFVRVLEPPEDQENQKVGWRAEFLPADHALSDFEFDVIIGADGHRNTLEGFR 233
>RGD|1311773 [details] [associations]
symbol:Mical2 "microtubule associated monoxygenase, calponin and
LIM domain containing 2" species:10116 "Rattus norvegicus"
[GO:0003779 "actin binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016709 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, NAD(P)H as one donor, and incorporation of one
atom of oxygen" evidence=ISS] [GO:0030042 "actin filament
depolymerization" evidence=ISS] [GO:0055114 "oxidation-reduction
process" evidence=ISS] [GO:0071949 "FAD binding" evidence=ISS]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 RGD:1311773 GO:GO:0005737
GO:GO:0003779 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0016709 GeneTree:ENSGT00640000091174
OMA:ACQGALA CTD:9645 IPI:IPI00361185 RefSeq:NP_001132980.1
UniGene:Rn.24515 ProteinModelPortal:D4A1F2
Ensembl:ENSRNOT00000021858 GeneID:365352 KEGG:rno:365352
NextBio:687225 ArrayExpress:D4A1F2 Uniprot:D4A1F2
Length = 961
Score = 188 (71.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F + PP +Q+ KIGWRA P DH +S +EF+V++GADG RNTLEGF+
Sbjct: 174 GVEIHVNVEFVRVREPPKDQENRKIGWRAEFLPADHALSNFEFDVIIGADGHRNTLEGFR 233
>UNIPROTKB|H9KVG1 [details] [associations]
symbol:Mical2 "Protein-methionine sulfoxide oxidase MICAL2"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 RGD:1311773 GO:GO:0046872
GO:GO:0008270 GO:GO:0016491 Gene3D:2.10.110.10 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0055114 Ensembl:ENSRNOT00000055142
Uniprot:H9KVG1
Length = 1104
Score = 188 (71.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 34/60 (56%), Positives = 43/60 (71%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVEIH V F + PP +Q+ KIGWRA P DH +S +EF+V++GADG RNTLEGF+
Sbjct: 175 GVEIHVNVEFVRVREPPKDQENRKIGWRAEFLPADHALSNFEFDVIIGADGHRNTLEGFR 234
>ZFIN|ZDB-GENE-061207-15 [details] [associations]
symbol:mical2b "microtubule associated
monooxygenase, calponin and LIM domain containing 2b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781
InterPro:IPR003042 Pfam:PF00307 PRINTS:PR00420 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 ZFIN:ZDB-GENE-061207-15
Gene3D:2.10.110.10 eggNOG:COG5069 Gene3D:1.10.418.10
SUPFAM:SSF47576 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 HOVERGEN:HBG052474 OrthoDB:EOG43BMN4
EMBL:CR759887 EMBL:BX908400 EMBL:CR388031 IPI:IPI00897534
UniGene:Dr.34911 Ensembl:ENSDART00000139013 Uniprot:F6P3I3
Length = 1679
Score = 190 (71.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 33/60 (55%), Positives = 45/60 (75%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H V F LL PP +Q + GWRA + P D+PVS YEF+V++GADG+R+TL+GF+
Sbjct: 174 GVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFR 233
>FB|FBgn0053208 [details] [associations]
symbol:Mical "Molecule interacting with CasL" species:7227
"Drosophila melanogaster" [GO:0003779 "actin binding"
evidence=ISS;IDA] [GO:0007411 "axon guidance" evidence=IMP;TAS]
[GO:0005829 "cytosol" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0045214 "sarcomere
organization" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IGI;IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IGI;IMP] [GO:0030042 "actin filament depolymerization"
evidence=IMP;IDA] [GO:0019417 "sulfur oxidation" evidence=IDA]
[GO:0070995 "NADPH oxidation" evidence=IDA] [GO:0043914
"NADPH:sulfur oxidoreductase activity" evidence=IDA] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 Pfam:PF00307 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 PROSITE:PS51450 SMART:SM00033
SMART:SM00132 EMBL:AE014297 GO:GO:0005829 GO:GO:0005886
GO:GO:0007411 GO:GO:0003779 GO:GO:0046872 GO:GO:0008270
GO:GO:0016322 GO:GO:0043195 Gene3D:2.10.110.10 GO:GO:0030042
GO:GO:0048813 GO:GO:0071949 GO:GO:0045214 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0070995 HSSP:P04006 GO:GO:0016709
InterPro:IPR022735 Pfam:PF12130 GeneTree:ENSGT00640000091174
ChiTaRS:MICAL1 EMBL:AF520713 EMBL:AF520714 EMBL:AF520715
EMBL:AY118290 EMBL:BT126186 RefSeq:NP_001138032.1
RefSeq:NP_788620.1 RefSeq:NP_788621.1 RefSeq:NP_788622.1
RefSeq:NP_788623.1 RefSeq:NP_788624.1 RefSeq:NP_788625.1
RefSeq:NP_788626.1 RefSeq:NP_788627.1 UniGene:Dm.33543
ProteinModelPortal:Q86BA1 SMR:Q86BA1 IntAct:Q86BA1
MINT:MINT-1328423 STRING:Q86BA1 PRIDE:Q86BA1
EnsemblMetazoa:FBtr0082209 EnsemblMetazoa:FBtr0082210
EnsemblMetazoa:FBtr0082211 EnsemblMetazoa:FBtr0082212
EnsemblMetazoa:FBtr0082213 GeneID:41225 KEGG:dme:Dmel_CG33208
UCSC:CG33208-RC CTD:41225 FlyBase:FBgn0053208 InParanoid:Q86BA1
PhylomeDB:Q86BA1 GenomeRNAi:41225 NextBio:822802 Bgee:Q86BA1
GO:GO:0043914 GO:GO:0030047 GO:GO:0019417 Uniprot:Q86BA1
Length = 4723
Score = 176 (67.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLE 68
GVEIHEGV F+ + P + GWRA V+P DHPVS YEF+VL+GADGKRN L+
Sbjct: 215 GVEIHEGVSFDHAVEPSGDGG----GWRAAVTPADHPVSHYEFDVLIGADGKRNMLD 267
>ZFIN|ZDB-GENE-081022-3 [details] [associations]
symbol:mical1 "microtubule associated monooxygenase,
calponin and LIM domain containing 1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 Pfam:PF00307 PROSITE:PS50021 PROSITE:PS50023
SMART:SM00033 SMART:SM00132 InterPro:IPR002938 Pfam:PF01494
ZFIN:ZDB-GENE-081022-3 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 Gene3D:1.10.418.10 SUPFAM:SSF47576
InterPro:IPR022735 Pfam:PF12130 GeneTree:ENSGT00640000091174
EMBL:BX548066 Ensembl:ENSDART00000136707 Bgee:H9KUX2 Uniprot:H9KUX2
Length = 1227
Score = 136 (52.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSPPDHPVSQYEFNVLVGADGKRNTLEGFK 71
GVE+H GV FE L N+ GWRA VSP HPV+ ++F+V + A G + +GFK
Sbjct: 173 GVEVHTGVAFEGL-----NEPSGSAGWRANVSPKSHPVADFQFDVFISAGGGKYVPDGFK 227
>UNIPROTKB|Q5TED7 [details] [associations]
symbol:MICAL1 "Protein-methionine sulfoxide oxidase MICAL1"
species:9606 "Homo sapiens" [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043154 "negative regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA] InterPro:IPR002938 Pfam:PF01494
GO:GO:0043066 GO:GO:0043154 GO:GO:0004497 EMBL:AL109947
GO:GO:0001933 HOGENOM:HOG000047263 IPI:IPI00647681 UniGene:Hs.33476
HGNC:HGNC:20619 ChiTaRS:MICAL1 SMR:Q5TED7 STRING:Q5TED7
Ensembl:ENST00000431946 HOVERGEN:HBG059545 Uniprot:Q5TED7
Length = 244
Score = 124 (48.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/61 (47%), Positives = 35/61 (57%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGVTFTGLQPPPRKGS----GWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGF 227
Query: 71 K 71
K
Sbjct: 228 K 228
>UNIPROTKB|Q8TDZ2 [details] [associations]
symbol:MICAL1 "Protein-methionine sulfoxide oxidase MICAL1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043154 "negative regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005882 "intermediate filament" evidence=NAS] [GO:0007010
"cytoskeleton organization" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017124 "SH3 domain binding" evidence=IPI]
[GO:0071949 "FAD binding" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IDA] [GO:0016709 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, NAD(P)H as one donor, and incorporation of one
atom of oxygen" evidence=IDA] [GO:0055114 "oxidation-reduction
process" evidence=IDA] [GO:0003779 "actin binding" evidence=IDA]
Pfam:PF00412 InterPro:IPR001715 InterPro:IPR001781 Pfam:PF00307
PROSITE:PS00478 PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033
SMART:SM00132 InterPro:IPR002938 Pfam:PF01494 GO:GO:0005737
GO:GO:0007165 GO:GO:0003779 GO:GO:0043066 GO:GO:0043154
GO:GO:0046872 EMBL:CH471051 GO:GO:0008270 GO:GO:0005882
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 eggNOG:COG5069
Gene3D:1.10.418.10 SUPFAM:SSF47576 EMBL:AL109947 GO:GO:0001933
GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130 CTD:64780
HOGENOM:HOG000047263 OMA:QEKHGAR EMBL:AB048948 EMBL:AK024500
EMBL:AK021999 EMBL:AK025392 EMBL:AK296284 EMBL:BC009972
EMBL:BC042144 EMBL:BC052983 EMBL:AL122098 IPI:IPI00386301
IPI:IPI00647681 IPI:IPI01014373 PIR:T34532 RefSeq:NP_001152763.1
RefSeq:NP_073602.3 UniGene:Hs.33476 PDB:1WYL PDB:2CO8 PDB:2DK9
PDBsum:1WYL PDBsum:2CO8 PDBsum:2DK9 ProteinModelPortal:Q8TDZ2
SMR:Q8TDZ2 MINT:MINT-1343875 STRING:Q8TDZ2 PhosphoSite:Q8TDZ2
DMDM:45593495 PaxDb:Q8TDZ2 PRIDE:Q8TDZ2 Ensembl:ENST00000358577
Ensembl:ENST00000358807 Ensembl:ENST00000368952 GeneID:64780
KEGG:hsa:64780 UCSC:uc003ptj.3 UCSC:uc010kdr.3
GeneCards:GC06M109766 HGNC:HGNC:20619 HPA:HPA030178 MIM:607129
neXtProt:NX_Q8TDZ2 PharmGKB:PA134900249 HOVERGEN:HBG052474
InParanoid:Q8TDZ2 OrthoDB:EOG4GF3DN PhylomeDB:Q8TDZ2 ChiTaRS:MICAL1
EvolutionaryTrace:Q8TDZ2 GenomeRNAi:64780 NextBio:66810
ArrayExpress:Q8TDZ2 Bgee:Q8TDZ2 CleanEx:HS_MICAL1
Genevestigator:Q8TDZ2 GermOnline:ENSG00000135596 Uniprot:Q8TDZ2
Length = 1067
Score = 124 (48.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/61 (47%), Positives = 35/61 (57%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGVTFTGLQPPPRKGS----GWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGF 227
Query: 71 K 71
K
Sbjct: 228 K 228
>UNIPROTKB|F1MH07 [details] [associations]
symbol:MICAL1 "Protein-methionine sulfoxide oxidase MICAL1"
species:9913 "Bos taurus" [GO:0016709 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, NAD(P)H as one donor, and incorporation of one
atom of oxygen" evidence=ISS] [GO:0071949 "FAD binding"
evidence=ISS] [GO:0003779 "actin binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0030042 "actin
filament depolymerization" evidence=ISS] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 Pfam:PF00307 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0005737 GO:GO:0003779 GO:GO:0043066
GO:GO:0043154 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030042 GO:GO:0071949 Gene3D:1.10.418.10
SUPFAM:SSF47576 GO:GO:0001933 GO:GO:0016709 InterPro:IPR022735
Pfam:PF12130 GeneTree:ENSGT00640000091174 EMBL:DAAA02025917
EMBL:BC133298 IPI:IPI00710309 RefSeq:NP_001075051.1 UniGene:Bt.9416
ProteinModelPortal:F1MH07 Ensembl:ENSBTAT00000010714 GeneID:508306
KEGG:bta:508306 CTD:64780 HOGENOM:HOG000047263 OMA:QEKHGAR
NextBio:20868453 Uniprot:F1MH07
Length = 1070
Score = 120 (47.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH G+ F L PPP GWRA + P P +++YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGITFTGLQPPPKKGS----GWRAQLQPSPPAQLAKYEFDVLISAAGGKFVPEGF 227
>UNIPROTKB|F1RZP9 [details] [associations]
symbol:MICAL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071949 "FAD binding" evidence=IEA] [GO:0043154
"negative regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0030042 "actin
filament depolymerization" evidence=IEA] [GO:0017124 "SH3 domain
binding" evidence=IEA] [GO:0016709 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, NAD(P)H as one donor, and incorporation of one atom of
oxygen" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 Pfam:PF00307 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 GO:GO:0005737 GO:GO:0043066 GO:GO:0043154
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030042
GO:GO:0071949 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0001933
GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 OMA:QEKHGAR EMBL:CU075452
Ensembl:ENSSSCT00000004875 Uniprot:F1RZP9
Length = 1084
Score = 120 (47.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 186 GVEIHWGVTFTGLQPPPKKGS----GWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGF 241
>MGI|MGI:2385847 [details] [associations]
symbol:Mical1 "microtubule associated monooxygenase,
calponin and LIM domain containing 1" species:10090 "Mus musculus"
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IMP] [GO:0003779 "actin binding" evidence=ISO] [GO:0004497
"monooxygenase activity" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016709 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
NAD(P)H as one donor, and incorporation of one atom of oxygen"
evidence=ISO] [GO:0017124 "SH3 domain binding" evidence=ISO]
[GO:0030042 "actin filament depolymerization" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=ISO;IMP] [GO:0071949 "FAD
binding" evidence=ISO] Pfam:PF00412 InterPro:IPR001715
InterPro:IPR001781 Pfam:PF00307 PROSITE:PS00478 PROSITE:PS50021
PROSITE:PS50023 SMART:SM00033 SMART:SM00132 InterPro:IPR002938
Pfam:PF01494 MGI:MGI:2385847 GO:GO:0005737 GO:GO:0003779
GO:GO:0043066 GO:GO:0043154 GO:GO:0005856 GO:GO:0017124
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030042
GO:GO:0071949 eggNOG:COG5069 Gene3D:1.10.418.10 SUPFAM:SSF47576
GO:GO:0001933 GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 CTD:64780 HOGENOM:HOG000047263
OMA:QEKHGAR HOVERGEN:HBG052474 ChiTaRS:MICAL1 EMBL:AK159369
EMBL:AK170881 EMBL:AK171234 EMBL:AK171411 EMBL:AK171429
EMBL:AK171479 EMBL:AC153360 EMBL:BC021477 EMBL:BC034682
IPI:IPI00116371 RefSeq:NP_001157905.1 RefSeq:NP_612188.1
UniGene:Mm.290431 PDB:2BRA PDB:2BRY PDB:2C4C PDBsum:2BRA
PDBsum:2BRY PDBsum:2C4C ProteinModelPortal:Q8VDP3 SMR:Q8VDP3
IntAct:Q8VDP3 STRING:Q8VDP3 PhosphoSite:Q8VDP3 PaxDb:Q8VDP3
PRIDE:Q8VDP3 Ensembl:ENSMUST00000019967 Ensembl:ENSMUST00000099934
Ensembl:ENSMUST00000119962 GeneID:171580 KEGG:mmu:171580
EvolutionaryTrace:Q8VDP3 NextBio:371076 Bgee:Q8VDP3
Genevestigator:Q8VDP3 GermOnline:ENSMUSG00000019823 Uniprot:Q8VDP3
Length = 1048
Score = 119 (46.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH GV F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGVKFTGLQPPPRKGS----GWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 227
>RGD|1309386 [details] [associations]
symbol:Mical1 "microtubule associated monoxygenase, calponin and
LIM domain containing 1" species:10116 "Rattus norvegicus"
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IEA;ISO] [GO:0003779 "actin binding" evidence=ISO;ISS]
[GO:0004497 "monooxygenase activity" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016709 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of one atom of oxygen" evidence=ISO;ISS]
[GO:0017124 "SH3 domain binding" evidence=IEA;ISO] [GO:0030042
"actin filament depolymerization" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA;ISO]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IEA;ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO;ISS]
[GO:0071949 "FAD binding" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001715 InterPro:IPR001781 Pfam:PF00307 PROSITE:PS00478
PROSITE:PS50021 PROSITE:PS50023 SMART:SM00033 SMART:SM00132
InterPro:IPR002938 Pfam:PF01494 RGD:1309386 GO:GO:0005737
GO:GO:0003779 GO:GO:0043066 GO:GO:0043154 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030042
GO:GO:0071949 Gene3D:1.10.418.10 SUPFAM:SSF47576 GO:GO:0001933
GO:GO:0016709 InterPro:IPR022735 Pfam:PF12130
GeneTree:ENSGT00640000091174 CTD:64780 OrthoDB:EOG4GF3DN
EMBL:CH474025 IPI:IPI00371967 RefSeq:NP_001099867.1
UniGene:Rn.106944 ProteinModelPortal:D3ZBP4
Ensembl:ENSRNOT00000000337 Ensembl:ENSRNOT00000057162 GeneID:294520
KEGG:rno:294520 NextBio:638259 ArrayExpress:D3ZBP4 Uniprot:D3ZBP4
Length = 1047
Score = 117 (46.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 27/60 (45%), Positives = 33/60 (55%)
Query: 12 GVEIHEGVGFESLLPPPSNQDEEKIGWRAVVSP-PDHPVSQYEFNVLVGADGKRNTLEGF 70
GVEIH G F L PPP GWRA + P P ++ YEF+VL+ A G + EGF
Sbjct: 172 GVEIHWGFTFTGLQPPPKKGS----GWRARIQPSPPAQLASYEFDVLISAGGGKFVPEGF 227
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.136 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 74 74 0.00091 102 3 11 23 0.45 29
29 0.46 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 506 (54 KB)
Total size of DFA: 98 KB (2070 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.13u 0.12s 9.25t Elapsed: 00:00:00
Total cpu time: 9.13u 0.12s 9.25t Elapsed: 00:00:00
Start: Thu Aug 15 16:01:08 2013 End: Thu Aug 15 16:01:08 2013