Query psy4056
Match_columns 227
No_of_seqs 214 out of 1412
Neff 6.1
Searched_HMMs 46136
Date Sat Aug 17 00:13:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4056.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4056hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1235|consensus 100.0 1E-47 2.2E-52 367.6 13.4 176 52-227 60-235 (538)
2 COG0661 AarF Predicted unusual 100.0 2.9E-46 6.3E-51 357.3 18.7 148 80-227 52-202 (517)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 4.6E-42 9.9E-47 323.1 17.9 143 84-226 48-193 (437)
4 PRK04750 ubiB putative ubiquin 100.0 2.2E-41 4.7E-46 325.3 18.2 143 84-226 50-196 (537)
5 KOG1236|consensus 100.0 2.5E-32 5.5E-37 253.4 9.4 142 83-225 118-276 (565)
6 PF03109 ABC1: ABC1 family; I 99.9 1.4E-28 3.1E-33 194.2 4.4 85 143-227 1-87 (119)
7 KOG1234|consensus 99.8 3.2E-22 7E-27 178.2 3.7 120 107-226 2-122 (363)
8 cd05145 RIO1_like RIO kinase f 97.5 0.00017 3.8E-09 60.1 5.5 32 159-190 3-34 (190)
9 cd05147 RIO1_euk RIO kinase fa 97.2 0.00062 1.3E-08 57.3 5.0 32 159-190 3-34 (190)
10 cd05119 RIO RIO kinase family, 96.5 0.0023 4.9E-08 52.2 3.2 33 159-191 3-35 (187)
11 smart00090 RIO RIO-like kinase 96.3 0.007 1.5E-07 52.8 5.3 31 159-189 34-66 (237)
12 cd05144 RIO2_C RIO kinase fami 95.4 0.014 3E-07 48.6 3.1 32 158-189 20-51 (198)
13 cd06657 STKc_PAK4 Catalytic do 94.5 0.049 1.1E-06 47.7 4.4 46 142-187 2-55 (292)
14 cd07878 STKc_p38beta_MAPK11 Ca 93.6 0.11 2.3E-06 46.4 4.7 48 142-189 3-52 (343)
15 cd07879 STKc_p38delta_MAPK13 C 93.2 0.14 3.1E-06 45.9 4.9 60 143-202 4-70 (342)
16 cd00180 PKc Catalytic domain o 92.2 0.29 6.3E-06 38.4 4.9 44 161-204 1-49 (215)
17 KOG1187|consensus 92.1 0.23 5E-06 46.1 4.8 48 155-202 76-127 (361)
18 cd05085 PTKc_Fer Catalytic dom 91.8 0.42 9.1E-06 40.0 5.7 36 159-194 1-36 (250)
19 smart00221 STYKc Protein kinas 91.8 0.32 7E-06 39.4 4.9 44 159-202 5-53 (225)
20 cd05151 ChoK Choline Kinase (C 91.8 0.37 8E-06 38.2 5.1 47 158-205 3-51 (170)
21 KOG0667|consensus 91.3 0.31 6.6E-06 48.3 4.9 46 158-203 191-239 (586)
22 cd05084 PTKc_Fes Catalytic dom 91.2 0.52 1.1E-05 39.5 5.7 44 159-202 1-49 (252)
23 cd06635 STKc_TAO1 Catalytic do 91.0 0.47 1E-05 41.9 5.5 47 139-187 13-60 (317)
24 PF03881 Fructosamin_kin: Fruc 91.0 0.25 5.4E-06 44.6 3.7 69 134-207 2-70 (288)
25 cd05581 STKc_PDK1 Catalytic do 90.8 0.36 7.9E-06 40.8 4.4 29 159-187 7-36 (280)
26 cd06629 STKc_MAPKKK_Bck1_like 90.5 0.4 8.7E-06 40.7 4.4 35 153-187 1-36 (272)
27 KOG4236|consensus 90.4 0.31 6.6E-06 48.3 3.9 58 147-204 558-621 (888)
28 PRK10593 hypothetical protein; 90.3 0.64 1.4E-05 41.8 5.7 64 135-205 2-66 (297)
29 cd05069 PTKc_Yes Catalytic dom 90.2 0.52 1.1E-05 39.9 4.9 44 159-202 12-57 (260)
30 PLN00034 mitogen-activated pro 90.0 0.49 1.1E-05 42.6 4.8 44 159-202 80-128 (353)
31 cd06632 STKc_MEKK1_plant Catal 89.9 0.55 1.2E-05 39.2 4.7 31 158-188 5-36 (258)
32 cd07860 STKc_CDK2_3 Catalytic 89.6 0.61 1.3E-05 39.9 4.9 45 159-203 6-56 (284)
33 KOG0192|consensus 89.6 0.53 1.1E-05 43.9 4.7 41 161-202 49-95 (362)
34 cd05122 PKc_STE Catalytic doma 89.3 0.69 1.5E-05 38.0 4.8 44 158-201 5-52 (253)
35 cd07880 STKc_p38gamma_MAPK12 C 89.3 0.54 1.2E-05 42.2 4.4 48 141-188 2-51 (343)
36 cd05067 PTKc_Lck_Blk Catalytic 88.9 0.67 1.5E-05 39.1 4.6 43 159-201 12-56 (260)
37 cd07835 STKc_CDK1_like Catalyt 88.8 0.75 1.6E-05 39.3 4.8 44 159-202 5-54 (283)
38 cd05112 PTKc_Itk Catalytic dom 88.7 0.87 1.9E-05 38.2 5.1 45 159-203 10-56 (256)
39 cd07877 STKc_p38alpha_MAPK14 C 88.7 0.58 1.3E-05 42.0 4.2 32 158-189 22-54 (345)
40 cd05070 PTKc_Fyn_Yrk Catalytic 88.6 0.8 1.7E-05 38.7 4.8 44 159-202 12-57 (260)
41 cd07847 STKc_CDKL1_4 Catalytic 88.5 0.77 1.7E-05 39.1 4.7 45 159-203 7-57 (286)
42 KOG0595|consensus 88.3 0.69 1.5E-05 44.0 4.6 43 161-203 18-66 (429)
43 smart00219 TyrKc Tyrosine kina 88.3 0.85 1.8E-05 37.9 4.7 44 159-202 5-57 (258)
44 PRK14879 serine/threonine prot 88.2 0.98 2.1E-05 37.2 5.0 30 159-189 2-31 (211)
45 PRK09188 serine/threonine prot 87.7 0.93 2E-05 42.4 5.0 46 158-203 23-78 (365)
46 cd06606 STKc_MAPKKK Catalytic 87.7 1.1 2.4E-05 36.9 5.0 32 158-189 5-37 (260)
47 cd06637 STKc_TNIK Catalytic do 87.6 1.4 2.9E-05 37.3 5.7 54 148-203 3-59 (272)
48 cd08224 STKc_Nek6_Nek7 Catalyt 87.5 0.94 2E-05 38.0 4.6 45 158-202 7-58 (267)
49 cd06917 STKc_NAK1_like Catalyt 87.4 1.2 2.7E-05 37.8 5.3 45 159-203 7-56 (277)
50 cd05120 APH_ChoK_like Aminogly 87.3 1.8 4E-05 32.3 5.7 47 158-205 3-50 (155)
51 cd07840 STKc_CDK9_like Catalyt 87.3 1 2.2E-05 38.2 4.7 45 159-203 5-55 (287)
52 cd07861 STKc_CDK1_euk Catalyti 87.2 1.1 2.5E-05 38.1 5.0 44 159-202 6-55 (285)
53 cd05034 PTKc_Src_like Catalyti 87.2 1.1 2.3E-05 37.8 4.7 44 159-202 12-57 (261)
54 cd06630 STKc_MEKK1 Catalytic d 87.2 1.3 2.8E-05 37.4 5.2 44 159-202 6-59 (268)
55 cd07863 STKc_CDK4 Catalytic do 87.0 1.3 2.9E-05 37.9 5.3 46 159-204 6-57 (288)
56 cd07864 STKc_CDK12 Catalytic d 86.8 1.2 2.6E-05 38.4 4.9 44 159-202 13-62 (302)
57 cd05154 ACAD10_11_like Acyl-Co 86.7 1.1 2.4E-05 36.7 4.5 49 157-205 2-54 (223)
58 cd07833 STKc_CDKL Catalytic do 86.5 1 2.3E-05 38.3 4.3 45 159-203 7-57 (288)
59 PTZ00263 protein kinase A cata 86.3 0.87 1.9E-05 40.6 3.9 30 158-187 23-53 (329)
60 cd06626 STKc_MEKK4 Catalytic d 86.1 1.1 2.5E-05 37.5 4.3 44 159-202 6-55 (264)
61 cd07836 STKc_Pho85 Catalytic d 86.1 1.5 3.2E-05 37.4 5.1 44 159-202 6-54 (284)
62 cd06631 STKc_YSK4 Catalytic do 86.0 1.4 3E-05 37.2 4.8 30 159-188 6-35 (265)
63 cd06638 STKc_myosinIIIA Cataly 85.9 1.7 3.6E-05 37.2 5.3 46 159-204 24-72 (286)
64 KOG1166|consensus 85.9 0.59 1.3E-05 48.9 2.9 31 159-189 704-734 (974)
65 cd05575 STKc_SGK Catalytic dom 85.6 1.5 3.3E-05 38.8 5.1 29 160-188 2-31 (323)
66 cd06642 STKc_STK25-YSK1 Cataly 85.6 1.4 3E-05 37.7 4.7 39 149-189 2-41 (277)
67 smart00220 S_TKc Serine/Threon 85.4 1.7 3.7E-05 35.2 5.0 38 165-202 1-43 (244)
68 cd05626 STKc_LATS2 Catalytic d 85.3 1.1 2.4E-05 40.8 4.2 29 159-187 7-36 (381)
69 cd07851 STKc_p38 Catalytic dom 85.3 1.3 2.8E-05 39.6 4.5 31 158-188 20-51 (343)
70 cd06639 STKc_myosinIIIB Cataly 85.3 1.8 3.8E-05 37.3 5.2 45 159-203 28-75 (291)
71 cd07869 STKc_PFTAIRE1 Catalyti 85.2 1.5 3.2E-05 38.2 4.7 30 158-187 10-40 (303)
72 cd05603 STKc_SGK2 Catalytic do 85.1 1.7 3.7E-05 38.3 5.2 29 160-188 2-31 (321)
73 cd05604 STKc_SGK3 Catalytic do 85.1 1.7 3.7E-05 38.5 5.1 30 160-189 2-32 (325)
74 cd05600 STKc_Sid2p_Dbf2p Catal 84.9 1.7 3.7E-05 38.6 5.0 31 159-189 7-38 (333)
75 cd05096 PTKc_DDR1 Catalytic do 84.7 1.4 3.1E-05 38.3 4.4 35 158-192 10-61 (304)
76 cd06646 STKc_MAP4K5 Catalytic 84.6 1.7 3.8E-05 36.7 4.8 31 159-189 15-46 (267)
77 cd06614 STKc_PAK Catalytic dom 84.4 1.7 3.8E-05 37.2 4.8 52 148-201 16-70 (286)
78 cd05612 STKc_PRKX_like Catalyt 84.3 1.4 2.9E-05 38.4 4.1 29 159-187 7-36 (291)
79 cd07871 STKc_PCTAIRE3 Catalyti 84.2 1.7 3.8E-05 37.6 4.7 44 159-202 11-59 (288)
80 cd07832 STKc_CCRK Catalytic do 84.1 1.7 3.6E-05 37.0 4.5 45 159-203 6-56 (286)
81 KOG0574|consensus 84.0 0.18 3.9E-06 46.8 -1.6 78 136-215 18-102 (502)
82 cd06641 STKc_MST3 Catalytic do 84.0 2.8 6E-05 35.8 5.8 39 149-189 2-41 (277)
83 cd05611 STKc_Rim15_like Cataly 84.0 1 2.3E-05 37.9 3.1 30 159-188 2-32 (260)
84 cd05068 PTKc_Frk_like Catalyti 83.9 2 4.3E-05 36.2 4.9 45 159-203 12-58 (261)
85 cd06633 STKc_TAO3 Catalytic do 83.5 2.1 4.6E-05 37.6 5.0 40 146-187 16-56 (313)
86 cd05072 PTKc_Lyn Catalytic dom 83.4 2.3 5E-05 35.8 5.0 30 159-188 12-41 (261)
87 cd05073 PTKc_Hck Catalytic dom 83.4 2.1 4.5E-05 36.2 4.8 45 158-202 11-57 (260)
88 cd05041 PTKc_Fes_like Catalyti 83.1 2 4.3E-05 35.8 4.5 31 160-190 2-32 (251)
89 cd05103 PTKc_VEGFR2 Catalytic 83.1 2.1 4.5E-05 38.3 4.9 46 158-203 12-67 (343)
90 cd07848 STKc_CDKL5 Catalytic d 83.1 1.9 4.1E-05 37.0 4.4 43 159-201 7-55 (287)
91 cd07837 STKc_CdkB_plant Cataly 83.0 2.1 4.6E-05 36.7 4.7 45 159-203 7-57 (295)
92 PF07714 Pkinase_Tyr: Protein 83.0 1.9 4.2E-05 36.7 4.5 32 160-191 6-42 (259)
93 cd07867 STKc_CDC2L6 Catalytic 83.0 2.1 4.6E-05 37.2 4.8 47 156-202 4-54 (317)
94 cd06645 STKc_MAP4K3 Catalytic 82.7 1.9 4.2E-05 36.4 4.3 32 159-190 15-47 (267)
95 cd05599 STKc_NDR_like Catalyti 82.6 1.8 3.9E-05 38.8 4.3 29 159-187 7-36 (364)
96 cd06605 PKc_MAPKK Catalytic do 82.5 2.2 4.7E-05 35.9 4.5 43 159-201 7-54 (265)
97 cd07873 STKc_PCTAIRE1 Catalyti 82.5 2.4 5.1E-05 36.8 4.9 44 158-201 11-59 (301)
98 cd05627 STKc_NDR2 Catalytic do 82.4 1.9 4.2E-05 38.8 4.4 29 159-187 7-36 (360)
99 PTZ00284 protein kinase; Provi 82.4 2.2 4.8E-05 40.2 4.9 45 159-203 135-182 (467)
100 cd05573 STKc_ROCK_NDR_like Cat 82.4 2 4.4E-05 38.0 4.5 30 159-188 7-37 (350)
101 cd07838 STKc_CDK4_6_like Catal 82.3 2.7 5.8E-05 35.7 5.0 45 159-203 5-55 (287)
102 cd05590 STKc_nPKC_eta Catalyti 82.3 2.4 5.2E-05 37.6 4.9 29 160-188 2-31 (320)
103 cd00192 PTKc Catalytic domain 82.2 3.3 7E-05 34.3 5.4 34 159-192 1-38 (262)
104 cd06608 STKc_myosinIII_like Ca 82.1 3 6.6E-05 34.9 5.3 45 159-203 12-59 (275)
105 PHA02988 hypothetical protein; 82.1 2.5 5.4E-05 36.8 4.9 31 157-188 24-54 (283)
106 cd06636 STKc_MAP4K4_6 Catalyti 82.0 2.9 6.3E-05 35.7 5.2 30 159-188 22-52 (282)
107 cd08229 STKc_Nek7 Catalytic do 81.9 2 4.3E-05 36.2 4.1 28 159-186 8-36 (267)
108 cd06611 STKc_SLK_like Catalyti 81.8 2.9 6.2E-05 35.7 5.1 34 159-192 11-45 (280)
109 cd07845 STKc_CDK10 Catalytic d 81.8 2 4.3E-05 37.4 4.2 44 159-202 13-62 (309)
110 cd07868 STKc_CDK8 Catalytic do 81.7 3.1 6.7E-05 36.3 5.3 48 156-203 4-55 (317)
111 cd06628 STKc_MAPKKK_Byr2_like 81.5 2.8 6.1E-05 35.3 4.9 30 159-188 6-36 (267)
112 cd05597 STKc_DMPK_like Catalyt 81.4 2.1 4.5E-05 38.2 4.2 29 159-187 7-36 (331)
113 cd05040 PTKc_Ack_like Catalyti 81.3 2.4 5.2E-05 35.5 4.4 32 160-191 2-37 (257)
114 cd07859 STKc_TDY_MAPK_plant Ca 81.3 2.5 5.4E-05 37.1 4.6 29 159-187 6-35 (338)
115 cd06649 PKc_MEK2 Catalytic dom 81.1 2.5 5.5E-05 37.5 4.7 43 159-201 11-58 (331)
116 cd05631 STKc_GRK4 Catalytic do 81.0 2.4 5.3E-05 36.6 4.4 31 159-189 6-37 (285)
117 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 80.9 3.1 6.7E-05 35.5 5.0 44 159-202 10-61 (284)
118 cd07862 STKc_CDK6 Catalytic do 80.8 3.1 6.6E-05 35.7 4.9 44 159-202 7-57 (290)
119 cd07853 STKc_NLK Catalytic dom 80.8 2.8 6E-05 37.9 4.9 29 159-187 6-35 (372)
120 cd05620 STKc_nPKC_delta Cataly 80.8 3 6.5E-05 36.9 5.0 30 160-189 2-32 (316)
121 cd06607 STKc_TAO Catalytic dom 80.8 2.9 6.3E-05 36.4 4.8 38 148-187 12-50 (307)
122 cd07842 STKc_CDK8_like Catalyt 80.8 2.8 6E-05 36.3 4.7 44 159-202 6-58 (316)
123 cd06617 PKc_MKK3_6 Catalytic d 80.7 2.2 4.7E-05 36.3 3.9 32 159-190 7-39 (283)
124 cd06623 PKc_MAPKK_plant_like C 80.7 3.5 7.5E-05 34.4 5.1 32 159-190 7-39 (264)
125 cd05571 STKc_PKB Catalytic dom 80.5 2.5 5.4E-05 37.5 4.4 29 160-188 2-31 (323)
126 cd07841 STKc_CDK7 Catalytic do 80.5 2.7 5.9E-05 36.2 4.5 43 159-201 6-57 (298)
127 KOG1163|consensus 80.5 1.4 3E-05 40.0 2.6 32 159-190 21-53 (341)
128 PF00069 Pkinase: Protein kina 80.5 3.4 7.4E-05 34.4 5.0 36 159-194 5-41 (260)
129 cd06627 STKc_Cdc7_like Catalyt 80.5 4.2 9.1E-05 33.6 5.5 33 158-190 5-38 (254)
130 cd06610 STKc_OSR1_SPAK Catalyt 80.5 4 8.7E-05 34.1 5.4 31 158-188 6-37 (267)
131 cd05598 STKc_LATS Catalytic do 80.3 2.9 6.3E-05 37.8 4.8 29 159-187 7-36 (376)
132 cd05063 PTKc_EphR_A2 Catalytic 80.2 3 6.6E-05 35.2 4.6 34 158-191 10-47 (268)
133 cd05632 STKc_GRK5 Catalytic do 80.2 2.9 6.2E-05 36.1 4.5 30 159-188 6-36 (285)
134 cd05628 STKc_NDR1 Catalytic do 80.0 2.5 5.4E-05 38.2 4.3 29 159-187 7-36 (363)
135 cd05587 STKc_cPKC Catalytic do 79.9 2.7 5.9E-05 37.1 4.4 31 159-189 6-37 (324)
136 cd07872 STKc_PCTAIRE2 Catalyti 79.9 2.9 6.3E-05 36.5 4.5 31 158-188 11-42 (309)
137 cd05602 STKc_SGK1 Catalytic do 79.8 3.6 7.8E-05 36.4 5.1 29 160-188 2-31 (325)
138 cd05102 PTKc_VEGFR3 Catalytic 79.4 2.4 5.2E-05 37.5 3.9 45 159-203 13-67 (338)
139 cd05608 STKc_GRK1 Catalytic do 79.4 2.8 6E-05 36.1 4.2 28 161-188 1-29 (280)
140 cd07839 STKc_CDK5 Catalytic do 79.3 2.8 6.1E-05 35.7 4.2 44 159-202 6-55 (284)
141 PTZ00036 glycogen synthase kin 79.2 3.7 8.1E-05 38.6 5.3 62 138-202 53-115 (440)
142 PLN00009 cyclin-dependent kina 79.2 3.2 7E-05 35.7 4.5 45 159-203 8-58 (294)
143 cd06625 STKc_MEKK3_like Cataly 79.1 5 0.00011 33.6 5.6 31 158-188 7-38 (263)
144 cd06640 STKc_MST4 Catalytic do 79.1 4.2 9.1E-05 34.7 5.2 36 150-187 3-39 (277)
145 cd05579 STKc_MAST_like Catalyt 78.9 5.7 0.00012 32.9 5.9 28 161-188 1-29 (265)
146 cd08225 STKc_Nek5 Catalytic do 78.8 3.2 6.9E-05 34.6 4.3 44 158-201 5-54 (257)
147 cd07876 STKc_JNK2 Catalytic do 78.7 3.1 6.8E-05 37.3 4.5 30 159-188 27-57 (359)
148 cd07870 STKc_PFTAIRE2 Catalyti 78.7 3.8 8.3E-05 35.2 4.8 45 158-202 10-59 (291)
149 cd05592 STKc_nPKC_theta_delta 78.6 1.8 4E-05 38.2 2.9 30 160-189 2-32 (316)
150 cd05591 STKc_nPKC_epsilon Cata 78.5 1.7 3.7E-05 38.4 2.6 29 160-188 2-31 (321)
151 cd05570 STKc_PKC Catalytic dom 78.3 3.6 7.8E-05 36.3 4.7 29 160-188 2-31 (318)
152 cd05615 STKc_cPKC_alpha Cataly 78.3 2 4.4E-05 38.1 3.1 30 159-188 6-36 (323)
153 cd05059 PTKc_Tec_like Catalyti 78.1 3.8 8.3E-05 34.5 4.6 44 159-202 10-55 (256)
154 KOG0600|consensus 78.1 2.8 6E-05 41.1 4.1 53 150-204 116-174 (560)
155 cd07846 STKc_CDKL2_3 Catalytic 78.1 3.9 8.4E-05 34.8 4.7 44 159-202 7-56 (286)
156 cd05107 PTKc_PDGFR_beta Cataly 78.1 3.2 7E-05 38.7 4.5 32 159-190 43-80 (401)
157 cd05617 STKc_aPKC_zeta Catalyt 78.1 3.8 8.3E-05 36.4 4.8 30 160-189 2-32 (327)
158 cd07874 STKc_JNK3 Catalytic do 78.0 4.6 9.9E-05 36.1 5.3 37 152-188 15-53 (355)
159 PTZ00024 cyclin-dependent prot 77.9 3.2 6.8E-05 36.7 4.2 30 159-188 15-45 (335)
160 TIGR03724 arch_bud32 Kae1-asso 77.8 4.5 9.7E-05 33.0 4.8 27 161-188 2-28 (199)
161 cd05038 PTKc_Jak_rpt2 Catalyti 77.7 3.8 8.2E-05 34.7 4.5 44 159-202 10-62 (284)
162 KOG0199|consensus 77.6 2.1 4.5E-05 43.9 3.1 38 160-197 117-158 (1039)
163 cd05064 PTKc_EphR_A10 Catalyti 77.4 3.5 7.6E-05 35.1 4.2 32 159-190 11-46 (266)
164 cd05589 STKc_PKN Catalytic dom 77.3 3.3 7.2E-05 36.6 4.1 30 159-188 5-35 (324)
165 KOG0193|consensus 77.3 1.9 4.2E-05 43.1 2.8 52 149-202 387-444 (678)
166 cd05104 PTKc_Kit Catalytic dom 77.1 3.7 8.1E-05 37.4 4.5 46 158-203 40-95 (375)
167 cd05605 STKc_GRK4_like Catalyt 77.1 3.9 8.4E-05 35.3 4.4 30 159-188 6-36 (285)
168 cd07866 STKc_BUR1 Catalytic do 77.0 4.2 9.1E-05 35.0 4.6 43 159-201 14-62 (311)
169 cd06653 STKc_MEKK3_like_1 Cata 76.9 4 8.6E-05 34.5 4.4 30 158-187 7-37 (264)
170 cd05071 PTKc_Src Catalytic dom 76.9 4.8 0.0001 34.1 4.9 43 160-202 13-57 (262)
171 cd07844 STKc_PCTAIRE_like Cata 76.9 4 8.7E-05 35.0 4.5 44 159-202 11-59 (291)
172 cd06620 PKc_MAPKK_Byr1_like Ca 76.9 3.9 8.5E-05 35.1 4.4 43 159-201 11-58 (284)
173 cd05123 STKc_AGC Catalytic dom 76.9 4.3 9.3E-05 33.6 4.5 29 161-189 1-30 (250)
174 cd06612 STKc_MST1_2 Catalytic 76.7 4.1 8.8E-05 33.9 4.3 44 159-202 9-54 (256)
175 cd05049 PTKc_Trk Catalytic dom 76.6 4 8.6E-05 34.6 4.3 43 159-201 11-63 (280)
176 cd05588 STKc_aPKC Catalytic do 76.5 4.4 9.6E-05 36.0 4.7 29 160-188 2-31 (329)
177 cd05618 STKc_aPKC_iota Catalyt 76.5 4.9 0.00011 35.8 5.0 30 160-189 2-32 (329)
178 cd05074 PTKc_Tyro3 Catalytic d 76.4 3.4 7.5E-05 34.9 3.9 32 159-190 5-40 (273)
179 cd08228 STKc_Nek6 Catalytic do 76.4 3.9 8.3E-05 34.4 4.1 29 159-187 8-37 (267)
180 cd05584 STKc_p70S6K Catalytic 76.3 4.9 0.00011 35.6 4.9 29 159-187 2-34 (323)
181 cd05114 PTKc_Tec_Rlk Catalytic 76.3 5.3 0.00011 33.5 5.0 45 159-203 10-56 (256)
182 cd07865 STKc_CDK9 Catalytic do 76.2 4.7 0.0001 34.6 4.7 29 158-186 17-46 (310)
183 KOG0583|consensus 76.1 4.4 9.6E-05 37.8 4.8 47 158-204 22-77 (370)
184 cd05108 PTKc_EGFR Catalytic do 75.9 5.3 0.00011 35.0 5.0 33 158-190 12-49 (316)
185 cd05625 STKc_LATS1 Catalytic d 75.8 3.8 8.2E-05 37.2 4.2 29 159-187 7-36 (382)
186 cd07854 STKc_MAPK4_6 Catalytic 75.7 4.8 0.0001 35.9 4.8 44 158-201 10-57 (342)
187 PF04655 APH_6_hur: Aminoglyco 75.7 3 6.5E-05 37.1 3.4 32 159-190 8-39 (253)
188 cd06624 STKc_ASK Catalytic dom 75.3 7 0.00015 33.0 5.5 34 158-191 13-47 (268)
189 cd05050 PTKc_Musk Catalytic do 75.3 5.7 0.00012 34.0 5.0 43 159-201 11-63 (288)
190 cd07850 STKc_JNK Catalytic dom 75.2 4.8 0.0001 36.0 4.6 29 158-186 21-50 (353)
191 cd05113 PTKc_Btk_Bmx Catalytic 75.1 5 0.00011 33.9 4.5 43 159-201 10-54 (256)
192 cd06650 PKc_MEK1 Catalytic dom 74.8 5.1 0.00011 35.7 4.7 44 159-202 11-59 (333)
193 cd05578 STKc_Yank1 Catalytic d 74.7 4.8 0.0001 33.7 4.3 29 159-187 6-35 (258)
194 cd05629 STKc_NDR_like_fungal C 74.3 4.3 9.4E-05 36.7 4.2 29 159-187 7-36 (377)
195 cd05593 STKc_PKB_gamma Catalyt 74.2 6.8 0.00015 34.8 5.3 30 160-189 2-32 (328)
196 cd07829 STKc_CDK_like Catalyti 74.0 5.8 0.00013 33.5 4.6 44 159-202 5-54 (282)
197 cd05572 STKc_cGK_PKG Catalytic 73.9 5.6 0.00012 33.4 4.5 28 161-188 1-29 (262)
198 cd06609 STKc_MST3_like Catalyt 73.8 6.1 0.00013 33.5 4.8 30 159-188 7-37 (274)
199 cd05080 PTKc_Tyk2_rpt2 Catalyt 73.7 6.1 0.00013 33.8 4.7 31 159-189 10-45 (283)
200 cd05109 PTKc_HER2 Catalytic do 73.6 8.7 0.00019 32.7 5.7 34 159-192 13-51 (279)
201 cd05586 STKc_Sck1_like Catalyt 73.6 3.2 7E-05 36.7 3.1 27 161-187 1-28 (330)
202 cd05105 PTKc_PDGFR_alpha Catal 73.5 5.6 0.00012 37.1 4.8 33 159-191 43-81 (400)
203 cd05607 STKc_GRK7 Catalytic do 73.4 6 0.00013 34.0 4.6 27 161-187 1-28 (277)
204 cd05115 PTKc_Zap-70 Catalytic 73.3 8 0.00017 32.7 5.4 33 161-193 3-38 (257)
205 cd05614 STKc_MSK2_N N-terminal 73.3 6.1 0.00013 34.9 4.8 30 159-188 6-39 (332)
206 cd05610 STKc_MASTL Catalytic d 73.2 4.1 9E-05 40.7 4.0 30 159-188 10-40 (669)
207 cd07849 STKc_ERK1_2_like Catal 72.9 6.1 0.00013 35.0 4.7 30 159-188 11-41 (336)
208 PF01636 APH: Phosphotransfera 72.8 8.8 0.00019 31.2 5.4 46 159-205 3-49 (239)
209 PHA03209 serine/threonine kina 72.8 4.8 0.0001 36.4 4.0 30 159-188 72-102 (357)
210 cd05035 PTKc_Axl_like Catalyti 72.8 6 0.00013 33.2 4.4 31 159-189 5-39 (273)
211 cd07855 STKc_ERK5 Catalytic do 72.7 6.4 0.00014 34.9 4.8 30 159-188 11-41 (334)
212 cd05630 STKc_GRK6 Catalytic do 72.5 5.7 0.00012 34.3 4.4 31 159-189 6-37 (285)
213 cd07858 STKc_TEY_MAPK_plant Ca 72.4 7 0.00015 34.7 4.9 31 158-188 10-41 (337)
214 cd05118 STKc_CMGC Catalytic do 72.3 7.1 0.00015 33.0 4.8 44 159-202 5-54 (283)
215 cd05585 STKc_YPK1_like Catalyt 72.2 5.6 0.00012 34.9 4.3 27 161-187 1-28 (312)
216 cd06618 PKc_MKK7 Catalytic dom 72.2 6 0.00013 34.2 4.4 31 158-188 20-51 (296)
217 cd05083 PTKc_Chk Catalytic dom 72.1 5.3 0.00011 33.5 3.9 41 159-200 12-53 (254)
218 cd05033 PTKc_EphR Catalytic do 71.9 6.4 0.00014 33.2 4.4 38 158-195 9-50 (266)
219 cd05580 STKc_PKA Catalytic dom 71.8 5.8 0.00012 34.2 4.2 30 159-188 7-37 (290)
220 cd05601 STKc_CRIK Catalytic do 71.7 4.9 0.00011 35.5 3.8 30 159-188 7-37 (330)
221 cd06621 PKc_MAPKK_Pek1_like Ca 71.7 6.5 0.00014 33.8 4.5 43 159-201 7-54 (287)
222 cd05633 STKc_GRK3 Catalytic do 71.6 3.9 8.4E-05 35.3 3.0 30 160-189 1-31 (279)
223 cd05616 STKc_cPKC_beta Catalyt 71.4 3.2 6.9E-05 36.7 2.5 31 159-189 6-37 (323)
224 cd06616 PKc_MKK4 Catalytic dom 71.4 7 0.00015 33.4 4.6 31 159-189 10-41 (288)
225 cd06634 STKc_TAO2 Catalytic do 71.3 7.4 0.00016 34.0 4.8 39 147-187 11-50 (308)
226 PLN03225 Serine/threonine-prot 70.9 8.5 0.00018 37.9 5.6 31 158-188 137-172 (566)
227 PRK10345 hypothetical protein; 70.8 7 0.00015 33.5 4.4 46 157-204 6-54 (210)
228 cd06651 STKc_MEKK3 Catalytic d 70.6 8.4 0.00018 32.5 4.9 31 158-188 7-38 (266)
229 cd05039 PTKc_Csk_like Catalyti 70.1 9.1 0.0002 32.0 4.9 44 158-202 11-56 (256)
230 cd07875 STKc_JNK1 Catalytic do 70.1 7.5 0.00016 34.9 4.7 30 159-188 30-60 (364)
231 cd05583 STKc_MSK_N N-terminal 70.0 7.6 0.00016 33.3 4.5 29 159-187 6-38 (288)
232 cd05613 STKc_MSK1_N N-terminal 70.0 8 0.00017 33.1 4.7 45 159-203 6-61 (290)
233 cd05619 STKc_nPKC_theta Cataly 69.7 4 8.6E-05 36.2 2.8 30 160-189 2-32 (316)
234 cd06644 STKc_STK10_LOK Catalyt 69.4 11 0.00023 32.4 5.4 42 149-192 10-52 (292)
235 cd05595 STKc_PKB_beta Catalyti 69.4 9.9 0.00022 33.6 5.2 30 160-189 2-32 (323)
236 KOG0594|consensus 69.3 3 6.6E-05 38.6 1.9 55 150-206 10-70 (323)
237 PTZ00283 serine/threonine prot 69.0 4.3 9.2E-05 39.0 3.0 31 158-188 37-68 (496)
238 cd07856 STKc_Sty1_Hog1 Catalyt 68.9 8.7 0.00019 34.1 4.8 46 158-203 15-66 (328)
239 cd07843 STKc_CDC2L1 Catalytic 68.9 8.5 0.00018 33.0 4.6 30 159-188 11-41 (293)
240 cd05606 STKc_beta_ARK Catalyti 68.8 5.1 0.00011 34.4 3.2 29 160-188 1-30 (278)
241 cd08227 PK_STRAD_alpha Pseudok 68.5 6.6 0.00014 34.7 3.9 28 161-188 6-36 (327)
242 cd06613 STKc_MAP4K3_like Catal 68.5 8.7 0.00019 32.0 4.5 31 159-189 9-40 (262)
243 cd05052 PTKc_Abl Catalytic dom 67.8 10 0.00022 32.0 4.8 31 159-189 12-43 (263)
244 cd08217 STKc_Nek2 Catalytic do 67.7 11 0.00023 31.3 4.8 29 159-187 6-35 (265)
245 cd05574 STKc_phototropin_like 67.4 8.6 0.00019 33.5 4.4 30 159-188 7-37 (316)
246 cd05077 PTK_Jak1_rpt1 Pseudoki 67.3 10 0.00022 32.2 4.8 32 160-191 2-46 (262)
247 KOG4721|consensus 67.3 2.9 6.2E-05 42.1 1.4 67 114-203 103-169 (904)
248 cd05101 PTKc_FGFR2 Catalytic d 66.5 11 0.00023 32.7 4.8 46 158-203 20-77 (304)
249 cd05596 STKc_ROCK Catalytic do 66.2 8.2 0.00018 35.1 4.1 29 159-187 49-78 (370)
250 PTZ00426 cAMP-dependent protei 66.0 9.5 0.00021 34.3 4.5 28 159-186 36-65 (340)
251 cd08226 PK_STRAD_beta Pseudoki 66.0 11 0.00025 33.1 4.9 25 164-188 11-36 (328)
252 cd05624 STKc_MRCK_beta Catalyt 66.0 14 0.00029 32.9 5.4 29 159-187 7-36 (331)
253 cd05060 PTKc_Syk_like Catalyti 65.8 11 0.00024 31.5 4.6 31 161-191 3-37 (257)
254 cd05047 PTKc_Tie Catalytic dom 65.8 12 0.00026 31.7 4.9 44 160-203 2-52 (270)
255 cd06658 STKc_PAK5 Catalytic do 65.6 12 0.00027 32.4 5.0 36 150-187 21-57 (292)
256 cd05079 PTKc_Jak1_rpt2 Catalyt 65.5 9.3 0.0002 32.7 4.2 32 160-191 11-47 (284)
257 cd05594 STKc_PKB_alpha Catalyt 65.4 13 0.00028 32.8 5.2 29 160-188 2-31 (325)
258 cd08529 STKc_FA2-like Catalyti 65.4 9.8 0.00021 31.6 4.2 29 159-187 6-35 (256)
259 cd05148 PTKc_Srm_Brk Catalytic 65.2 9.7 0.00021 31.8 4.1 43 159-201 12-57 (261)
260 PHA03212 serine/threonine kina 65.1 8.3 0.00018 35.6 4.0 42 159-203 98-140 (391)
261 cd06619 PKc_MKK5 Catalytic dom 65.1 15 0.00032 31.4 5.4 31 159-189 7-38 (279)
262 cd06622 PKc_MAPKK_PBS2_like Ca 65.0 12 0.00026 31.9 4.7 43 159-201 7-54 (286)
263 cd05116 PTKc_Syk Catalytic dom 64.7 9.8 0.00021 32.0 4.1 28 161-188 3-33 (257)
264 KOG0575|consensus 64.6 11 0.00023 37.7 4.7 46 159-204 24-76 (592)
265 PHA03207 serine/threonine kina 64.6 9.2 0.0002 35.0 4.2 43 159-203 98-143 (392)
266 cd07834 STKc_MAPK Catalytic do 64.5 13 0.00028 32.6 5.0 45 159-203 6-56 (330)
267 cd06648 STKc_PAK_II Catalytic 64.0 13 0.00028 32.0 4.8 29 158-186 24-53 (285)
268 cd06654 STKc_PAK1 Catalytic do 63.7 9.6 0.00021 33.1 3.9 30 159-188 26-56 (296)
269 cd05048 PTKc_Ror Catalytic Dom 63.6 11 0.00024 32.0 4.2 34 159-192 11-50 (283)
270 KOG0032|consensus 63.4 11 0.00025 35.3 4.6 46 159-204 41-93 (382)
271 cd05577 STKc_GRK Catalytic dom 63.3 11 0.00025 32.0 4.3 28 161-188 1-29 (277)
272 cd06655 STKc_PAK2 Catalytic do 63.2 13 0.00029 32.2 4.8 28 159-186 25-53 (296)
273 cd05037 PTK_Jak_rpt1 Pseudokin 63.1 11 0.00024 31.3 4.1 41 160-200 2-55 (259)
274 PRK09550 mtnK methylthioribose 62.8 21 0.00046 33.9 6.3 58 131-190 6-64 (401)
275 cd06652 STKc_MEKK2 Catalytic d 62.7 11 0.00025 31.6 4.1 29 159-187 8-37 (265)
276 KOG3653|consensus 62.5 6.4 0.00014 38.4 2.7 42 159-201 216-257 (534)
277 cd05110 PTKc_HER4 Catalytic do 62.4 20 0.00043 31.2 5.7 33 159-191 13-50 (303)
278 PRK13184 pknD serine/threonine 62.3 9.5 0.00021 40.1 4.1 31 159-189 8-39 (932)
279 cd07830 STKc_MAK_like Catalyti 62.2 14 0.0003 31.3 4.6 31 159-189 5-36 (283)
280 cd05098 PTKc_FGFR1 Catalytic d 62.1 15 0.00032 32.0 4.8 46 158-203 23-80 (307)
281 cd05087 PTKc_Aatyk1_Aatyk3 Cat 62.0 13 0.00028 31.4 4.4 30 160-189 2-34 (269)
282 cd08223 STKc_Nek4 Catalytic do 61.9 16 0.00036 30.3 4.9 28 159-186 6-34 (257)
283 cd05057 PTKc_EGFR_like Catalyt 61.8 16 0.00035 31.1 4.9 32 159-190 13-49 (279)
284 cd05051 PTKc_DDR Catalytic dom 61.5 17 0.00037 31.1 5.0 33 159-191 11-60 (296)
285 cd06659 STKc_PAK6 Catalytic do 61.3 28 0.00061 30.2 6.5 29 160-188 28-57 (297)
286 cd08218 STKc_Nek1 Catalytic do 60.8 13 0.00027 31.1 4.0 28 159-186 6-34 (256)
287 cd05088 PTKc_Tie2 Catalytic do 60.8 15 0.00033 31.9 4.7 45 159-203 13-64 (303)
288 cd06647 STKc_PAK_I Catalytic d 60.4 16 0.00035 31.6 4.8 28 159-186 25-53 (293)
289 PRK05231 homoserine kinase; Pr 60.2 43 0.00093 29.6 7.5 49 130-186 5-54 (319)
290 KOG0658|consensus 60.0 9.3 0.0002 35.9 3.3 44 157-201 28-72 (364)
291 cd05622 STKc_ROCK1 Catalytic d 60.0 12 0.00026 34.1 4.0 29 159-187 49-78 (371)
292 KOG0587|consensus 59.6 9.6 0.00021 39.7 3.6 54 147-202 15-71 (953)
293 cd05609 STKc_MAST Catalytic do 59.5 24 0.00051 30.6 5.7 30 159-188 7-37 (305)
294 cd05089 PTKc_Tie1 Catalytic do 59.5 19 0.00041 31.1 5.1 46 158-203 7-59 (297)
295 cd06656 STKc_PAK3 Catalytic do 59.4 18 0.0004 31.3 4.9 30 159-188 25-55 (297)
296 cd06643 STKc_SLK Catalytic dom 58.5 24 0.00051 30.1 5.4 34 159-192 11-45 (282)
297 KOG0196|consensus 58.4 8.2 0.00018 40.1 2.8 73 125-199 603-679 (996)
298 KOG1094|consensus 58.4 12 0.00025 37.9 3.8 39 159-197 544-582 (807)
299 cd05082 PTKc_Csk Catalytic dom 58.1 19 0.00042 30.1 4.7 43 159-202 12-55 (256)
300 cd05061 PTKc_InsR Catalytic do 57.9 23 0.00049 30.4 5.2 31 159-189 12-48 (288)
301 cd05056 PTKc_FAK Catalytic dom 57.9 13 0.00028 31.4 3.7 33 158-190 11-47 (270)
302 cd05076 PTK_Tyk2_rpt1 Pseudoki 57.3 13 0.00029 31.8 3.7 30 161-190 3-57 (274)
303 KOG0597|consensus 57.3 11 0.00024 38.0 3.4 50 159-210 8-58 (808)
304 cd05054 PTKc_VEGFR Catalytic d 57.2 17 0.00037 32.5 4.5 30 159-188 13-48 (337)
305 PHA03211 serine/threonine kina 57.0 14 0.00029 35.4 4.0 42 158-202 174-216 (461)
306 cd05623 STKc_MRCK_alpha Cataly 57.0 11 0.00023 33.6 3.0 28 159-186 7-35 (332)
307 KOG0581|consensus 56.5 16 0.00034 34.4 4.1 45 159-203 85-134 (364)
308 cd08219 STKc_Nek3 Catalytic do 56.4 17 0.00038 30.2 4.2 28 159-186 6-34 (255)
309 cd07831 STKc_MOK Catalytic dom 56.4 12 0.00026 31.6 3.1 31 159-189 5-36 (282)
310 cd05106 PTKc_CSF-1R Catalytic 56.1 22 0.00047 32.4 5.0 46 158-203 43-98 (374)
311 cd08215 STKc_Nek Catalytic dom 55.9 24 0.00052 28.9 4.9 30 159-188 6-36 (258)
312 cd08530 STKc_CNK2-like Catalyt 55.8 19 0.00042 29.7 4.3 30 159-188 6-36 (256)
313 cd05091 PTKc_Ror2 Catalytic do 55.5 26 0.00056 29.8 5.2 35 159-193 11-51 (283)
314 cd05582 STKc_RSK_N N-terminal 55.2 16 0.00035 32.0 4.0 30 159-188 2-35 (318)
315 cd05036 PTKc_ALK_LTK Catalytic 55.2 29 0.00063 29.5 5.4 33 159-191 12-50 (277)
316 cd05097 PTKc_DDR_like Catalyti 55.2 14 0.0003 31.9 3.4 34 159-192 11-59 (295)
317 PF08667 BetR: BetR domain; I 54.8 26 0.00056 28.9 4.7 90 83-177 4-93 (147)
318 KOG0577|consensus 54.6 7.5 0.00016 39.4 1.8 72 136-213 14-87 (948)
319 PLN00113 leucine-rich repeat r 54.5 15 0.00032 37.9 4.0 30 158-187 695-725 (968)
320 cd05095 PTKc_DDR2 Catalytic do 54.1 19 0.0004 31.1 4.1 44 159-202 11-75 (296)
321 cd06615 PKc_MEK Catalytic doma 54.0 30 0.00065 30.2 5.4 34 159-192 7-41 (308)
322 cd05621 STKc_ROCK2 Catalytic d 53.7 19 0.00042 32.8 4.3 28 159-186 49-77 (370)
323 cd08220 STKc_Nek8 Catalytic do 52.5 25 0.00055 29.0 4.5 44 159-202 6-55 (256)
324 cd05111 PTK_HER3 Pseudokinase 51.8 25 0.00055 30.0 4.5 31 159-189 13-48 (279)
325 cd05075 PTKc_Axl Catalytic dom 51.7 33 0.00071 28.8 5.1 31 159-189 5-38 (272)
326 cd05065 PTKc_EphR_B Catalytic 51.7 36 0.00077 28.6 5.4 33 159-191 10-46 (269)
327 COG3105 Uncharacterized protei 51.5 1E+02 0.0022 25.1 7.4 42 72-117 51-93 (138)
328 PRK06148 hypothetical protein; 51.5 46 0.001 35.3 7.1 57 125-189 4-60 (1013)
329 KOG4250|consensus 51.4 9.5 0.00021 38.8 2.0 50 155-204 15-69 (732)
330 PF12844 HTH_19: Helix-turn-he 51.4 62 0.0014 21.5 5.6 63 86-157 1-63 (64)
331 KOG0197|consensus 51.4 16 0.00034 35.6 3.4 43 161-203 214-258 (468)
332 cd05066 PTKc_EphR_A Catalytic 51.2 30 0.00065 29.1 4.8 32 159-190 10-45 (267)
333 cd05090 PTKc_Ror1 Catalytic do 51.2 38 0.00082 28.8 5.5 31 159-189 11-46 (283)
334 cd05044 PTKc_c-ros Catalytic d 51.2 14 0.0003 31.1 2.7 30 160-189 2-38 (269)
335 KOG0593|consensus 51.1 20 0.00044 33.5 3.9 43 160-202 9-57 (396)
336 KOG3622|consensus 51.0 2.2E+02 0.0047 31.0 11.4 120 18-145 569-692 (1572)
337 KOG0660|consensus 50.4 18 0.00039 34.0 3.5 29 158-186 27-56 (359)
338 cd07857 STKc_MPK1 Catalytic do 50.1 33 0.00072 30.2 5.1 45 159-203 6-58 (332)
339 cd05053 PTKc_FGFR Catalytic do 49.4 34 0.00075 29.1 5.0 32 159-190 18-55 (293)
340 cd07852 STKc_MAPK15 Catalytic 49.2 29 0.00064 30.6 4.6 29 159-187 13-42 (337)
341 PRK11768 serine/threonine prot 48.1 1.1E+02 0.0023 27.7 8.2 70 129-205 8-79 (325)
342 cd05058 PTKc_Met_Ron Catalytic 47.7 41 0.00088 28.0 5.1 28 160-187 2-33 (262)
343 PF13443 HTH_26: Cro/C1-type H 47.7 45 0.00098 22.2 4.4 59 89-155 2-60 (63)
344 cd05055 PTKc_PDGFR Catalytic d 47.6 30 0.00065 30.1 4.4 46 158-203 40-95 (302)
345 cd05046 PTK_CCK4 Pseudokinase 45.7 36 0.00077 28.7 4.5 45 159-203 11-65 (275)
346 COG3001 Uncharacterized protei 45.7 74 0.0016 28.9 6.4 67 134-206 2-68 (286)
347 cd05043 PTK_Ryk Pseudokinase d 45.7 32 0.0007 29.1 4.2 34 159-192 12-50 (280)
348 KOG0201|consensus 44.6 23 0.00049 34.3 3.3 53 147-201 9-66 (467)
349 KOG0580|consensus 44.5 23 0.00049 32.0 3.0 45 155-199 23-75 (281)
350 KOG0668|consensus 44.3 36 0.00079 30.8 4.3 30 175-204 61-90 (338)
351 cd05062 PTKc_IGF-1R Catalytic 44.3 53 0.0011 27.8 5.3 31 159-189 12-48 (277)
352 PHA02882 putative serine/threo 43.7 20 0.00044 31.1 2.7 29 159-187 18-50 (294)
353 cd08221 STKc_Nek9 Catalytic do 43.6 39 0.00084 28.0 4.3 28 159-186 6-34 (256)
354 KOG0200|consensus 43.2 48 0.001 32.9 5.5 32 160-191 303-342 (609)
355 KOG1035|consensus 41.8 17 0.00037 39.4 2.1 56 151-206 476-534 (1351)
356 COG1718 RIO1 Serine/threonine 41.5 28 0.0006 31.5 3.1 35 160-194 55-89 (268)
357 cd05100 PTKc_FGFR3 Catalytic d 40.7 60 0.0013 28.6 5.3 46 158-203 17-74 (334)
358 PHA03390 pk1 serine/threonine- 40.5 40 0.00087 28.7 4.0 28 161-188 24-52 (267)
359 PLN03224 probable serine/threo 40.1 26 0.00056 34.3 3.0 31 158-188 150-197 (507)
360 KOG0983|consensus 39.7 27 0.00058 32.4 2.8 40 160-199 99-143 (391)
361 PF02520 DUF148: Domain of unk 38.6 1.7E+02 0.0038 22.1 7.9 63 76-140 43-105 (113)
362 PF15508 NAAA-beta: beta subun 38.4 1.3E+02 0.0028 22.3 6.1 30 99-128 49-78 (95)
363 cd08528 STKc_Nek10 Catalytic d 37.8 56 0.0012 27.3 4.5 29 159-187 6-36 (269)
364 KOG0582|consensus 37.0 78 0.0017 31.0 5.6 50 161-213 34-85 (516)
365 KOG2052|consensus 37.0 46 0.001 32.5 4.0 45 159-204 217-261 (513)
366 cd05045 PTKc_RET Catalytic dom 36.9 67 0.0015 27.4 4.8 32 159-190 6-43 (290)
367 KOG1164|consensus 36.5 49 0.0011 29.6 4.1 48 158-205 23-75 (322)
368 KOG4717|consensus 36.4 20 0.00044 35.9 1.6 22 166-187 26-53 (864)
369 PF11932 DUF3450: Protein of u 35.8 2.7E+02 0.0059 24.2 8.5 76 100-193 111-195 (251)
370 KOG0591|consensus 35.6 52 0.0011 30.6 4.0 34 159-192 25-60 (375)
371 PF03298 Stanniocalcin: Stanni 34.9 26 0.00056 30.5 1.9 66 95-164 140-205 (208)
372 COG1718 RIO1 Serine/threonine 34.6 66 0.0014 29.1 4.5 42 181-225 213-254 (268)
373 KOG0198|consensus 34.5 60 0.0013 29.9 4.3 44 159-202 23-70 (313)
374 cd05032 PTKc_InsR_like Catalyt 33.4 1.1E+02 0.0023 25.7 5.5 32 159-190 12-49 (277)
375 PRK10359 lipopolysaccharide co 33.4 88 0.0019 27.5 5.0 33 159-192 37-69 (232)
376 cd08216 PK_STRAD Pseudokinase 33.1 66 0.0014 27.7 4.2 26 162-188 11-36 (314)
377 smart00811 Alpha_kinase Alpha- 33.0 1.7E+02 0.0038 24.9 6.7 58 153-210 11-76 (198)
378 cd05042 PTKc_Aatyk Catalytic d 32.6 67 0.0015 26.9 4.1 30 161-190 3-35 (269)
379 KOG0588|consensus 32.2 37 0.00079 34.8 2.7 46 159-204 18-70 (786)
380 cd05150 APH Aminoglycoside 3'- 31.5 86 0.0019 26.4 4.6 42 164-206 10-51 (244)
381 PF12162 STAT1_TAZ2bind: STAT1 31.4 30 0.00064 19.7 1.1 18 123-140 1-18 (23)
382 KOG0661|consensus 30.8 55 0.0012 32.2 3.5 55 161-218 18-73 (538)
383 cd05576 STKc_RPK118_like Catal 30.4 54 0.0012 27.2 3.1 25 164-188 4-29 (237)
384 cd05099 PTKc_FGFR4 Catalytic d 29.9 94 0.002 27.0 4.7 33 158-190 17-57 (314)
385 cd05078 PTK_Jak2_Jak3_rpt1 Pse 29.6 34 0.00073 28.7 1.7 30 159-188 1-38 (258)
386 PF08277 PAN_3: PAN-like domai 29.1 47 0.001 22.7 2.1 21 164-184 51-71 (71)
387 PTZ00266 NIMA-related protein 28.7 71 0.0015 34.2 4.2 29 159-187 19-48 (1021)
388 cd05157 ETNK_euk Ethanolamine 28.4 83 0.0018 26.2 3.9 47 158-204 3-53 (235)
389 KOG0663|consensus 28.0 47 0.001 31.5 2.4 31 159-189 82-113 (419)
390 PRK09605 bifunctional UGMP fam 27.3 79 0.0017 30.6 4.0 32 156-188 336-367 (535)
391 KOG0592|consensus 27.2 30 0.00065 34.5 1.1 27 159-185 79-106 (604)
392 PF01163 RIO1: RIO1 family; I 27.1 57 0.0012 27.5 2.7 21 169-189 2-22 (188)
393 TIGR00270 conserved hypothetic 26.9 3.6E+02 0.0077 22.1 8.8 71 79-158 64-134 (154)
394 COG2334 Putative homoserine ki 26.1 3.2E+02 0.0069 25.2 7.6 64 133-205 13-77 (331)
395 PRK01964 4-oxalocrotonate taut 24.7 55 0.0012 22.2 1.8 33 135-167 22-54 (64)
396 cd08222 STKc_Nek11 Catalytic d 24.4 1.2E+02 0.0026 25.2 4.2 29 159-187 6-35 (260)
397 TIGR02721 ycfN_thiK thiamine k 23.8 1.5E+02 0.0033 25.3 4.8 46 159-205 2-50 (256)
398 TIGR02172 Fb_sc_TIGR02172 Fibr 22.4 1.7E+02 0.0036 25.0 4.7 45 158-205 6-51 (226)
399 PF11517 Nab2: Nuclear abundan 22.3 28 0.00061 27.0 -0.1 43 115-157 47-94 (107)
400 TIGR00013 taut 4-oxalocrotonat 22.3 63 0.0014 21.5 1.7 33 135-167 22-54 (63)
401 cd05086 PTKc_Aatyk2 Catalytic 22.2 1.7E+02 0.0037 24.5 4.8 30 160-189 2-34 (268)
402 KOG0610|consensus 22.1 82 0.0018 30.5 2.9 30 159-188 83-113 (459)
403 PRK00745 4-oxalocrotonate taut 21.9 70 0.0015 21.3 1.9 33 135-167 22-54 (62)
404 cd06461 M2_ACE Peptidase famil 21.9 2.6E+02 0.0056 27.3 6.4 81 69-150 44-131 (477)
405 KOG0615|consensus 21.4 81 0.0018 30.6 2.7 46 159-204 178-234 (475)
406 PF13565 HTH_32: Homeodomain-l 21.4 2E+02 0.0044 19.7 4.3 35 115-149 32-66 (77)
407 PF14875 PIP49_N: N-term cyste 20.9 72 0.0016 26.5 2.0 22 161-183 78-99 (158)
408 PLN02756 S-methyl-5-thioribose 20.7 1.9E+02 0.004 27.9 5.1 58 128-190 5-68 (418)
409 COG2112 Predicted Ser/Thr prot 20.3 1.1E+02 0.0023 26.6 3.0 43 161-204 30-73 (201)
410 cd00491 4Oxalocrotonate_Tautom 20.0 76 0.0016 20.7 1.7 33 135-167 21-53 (58)
No 1
>KOG1235|consensus
Probab=100.00 E-value=1e-47 Score=367.58 Aligned_cols=176 Identities=39% Similarity=0.617 Sum_probs=160.1
Q ss_pred HHHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCC
Q psy4056 52 NIAYIYKKALYQKATPDPTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPM 131 (227)
Q Consensus 52 ~i~~~y~~~l~~~~~~~~~~~~~~~~~~~~h~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~ 131 (227)
.+.++|.........+...++...+....+|.+.|++|+++|++|||+|||+||++|+++|++|+||.++|+.|||++||
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp 139 (538)
T KOG1235|consen 60 PGVLDYKHSLSALAVSLASSESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPP 139 (538)
T ss_pred ceEEehhhhcchhhccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCC
Confidence 34455554442222324455656677788899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhC
Q psy4056 132 SPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVF 211 (227)
Q Consensus 132 ~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~ 211 (227)
.|++++.++|++|||.+++++|.+||++||||||+||||+|+|++|++|||||||||+++.+..|+.+++.++.+++++|
T Consensus 140 ~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~ 219 (538)
T KOG1235|consen 140 FPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFF 219 (538)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHhcC
Q psy4056 212 PEFKFLWLVDETKRNI 227 (227)
Q Consensus 212 p~~~~~~l~~E~~~~l 227 (227)
|++++.|++||++++|
T Consensus 220 p~~~~~~lvdE~~~~L 235 (538)
T KOG1235|consen 220 PDFDLVWLVDEIAKSL 235 (538)
T ss_pred cCCchhhHHHHHHhhh
Confidence 9999999999999876
No 2
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-46 Score=357.35 Aligned_cols=148 Identities=30% Similarity=0.550 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCcc
Q psy4056 80 KVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPN 159 (227)
Q Consensus 80 ~~h~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~ 159 (227)
...++.+++|++++++|||+|||+||++|||+|++|++|+++|++|||++||+|+++++++|++|||.+++++|++||++
T Consensus 52 ~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~ 131 (517)
T COG0661 52 ELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPE 131 (517)
T ss_pred HHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCC---CCcchHHHHHHhcC
Q psy4056 160 PMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE---FKFLWLVDETKRNI 227 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~---~~~~~l~~E~~~~l 227 (227)
|+|||||||||+|+|++|++||||||||||++.+..||.+|+.+++++++++|. +++.++++|+.++|
T Consensus 132 PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 132 PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 88899999998864
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=4.6e-42 Score=323.07 Aligned_cols=143 Identities=29% Similarity=0.431 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccce
Q psy4056 84 EAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGA 163 (227)
Q Consensus 84 ~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~Pias 163 (227)
..|++++++++++||+|||+||++|+|+|++|++||++|++|||++||+|++++++++++|||.+++++|.+||++|+||
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCC---CCcchHHHHHHhc
Q psy4056 164 ASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE---FKFLWLVDETKRN 226 (227)
Q Consensus 164 ASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~---~~~~~l~~E~~~~ 226 (227)
|||||||+|+++||++|||||||||+.+.+..|+.+|+.+++++++++|. +++.++++|+++.
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 193 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKT 193 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999886 4568889988764
No 4
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.2e-41 Score=325.34 Aligned_cols=143 Identities=24% Similarity=0.346 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccce
Q psy4056 84 EAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGA 163 (227)
Q Consensus 84 ~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~Pias 163 (227)
..|++++.+++++||+|||+||++|||+|++|++|+++|++|||++||+|++++++++++|||.+++++|.+||++|+||
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~Plas 129 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLAS 129 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceEEEEecC-CCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCCC---CcchHHHHHHhc
Q psy4056 164 ASLAQVHKATLHD-GSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEF---KFLWLVDETKRN 226 (227)
Q Consensus 164 ASIaQVHrA~L~~-G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~~---~~~~l~~E~~~~ 226 (227)
|||||||+|++++ |++|||||||||+++.|..|+.+|+.+++++++++|+. +..++++|++++
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 9999999999997 99999999999999999999999999999999999864 567889888765
No 5
>KOG1236|consensus
Probab=99.97 E-value=2.5e-32 Score=253.40 Aligned_cols=142 Identities=25% Similarity=0.365 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC-ChhhhccccCcccc
Q psy4056 83 KEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGK-DPSEIFASIEPNPM 161 (227)
Q Consensus 83 ~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~-~~~~~F~~fd~~Pi 161 (227)
.-+-+-|+..++..||+|||+|||+|||+|+||+++|..|++||.+++|+||...++.+++++|. +++++|.+|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 34566899999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred ceeeccceEEEEec-------C---------CCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHh
Q psy4056 162 GAASLAQVHKATLH-------D---------GSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKR 225 (227)
Q Consensus 162 asASIaQVHrA~L~-------~---------G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~~~~~~l~~E~~~ 225 (227)
|||||||||+|+++ + .+.|||||.||+++++|+.|+.+|.+.+++.++ .|++.|-.+.+|.++
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~-vP~l~wL~l~~~vkq 276 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINN-VPDLSWLSLPLEVKQ 276 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhh-cCccccccCcchHHH
Confidence 99999999999996 2 158999999999999999999999999999995 699988777666653
No 6
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.95 E-value=1.4e-28 Score=194.22 Aligned_cols=85 Identities=34% Similarity=0.619 Sum_probs=81.3
Q ss_pred HhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCC--CCcchHH
Q psy4056 143 EDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPE--FKFLWLV 220 (227)
Q Consensus 143 ~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~--~~~~~l~ 220 (227)
+|||.+++++|++||++|+|||||||||+|+|++|++|||||||||+++.+..||.+|+.+++++++++|. +++.+++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999887 7889999
Q ss_pred HHHHhcC
Q psy4056 221 DETKRNI 227 (227)
Q Consensus 221 ~E~~~~l 227 (227)
+|++.+|
T Consensus 81 ~e~~~~l 87 (119)
T PF03109_consen 81 DEFRDSL 87 (119)
T ss_pred HHHHHHH
Confidence 9998764
No 7
>KOG1234|consensus
Probab=99.85 E-value=3.2e-22 Score=178.20 Aligned_cols=120 Identities=24% Similarity=0.394 Sum_probs=106.3
Q ss_pred HHcCC-CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEec
Q psy4056 107 IGALE-YLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQ 185 (227)
Q Consensus 107 lstr~-dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq 185 (227)
||-++ .++|++..+.|++.++.+..||..++++++..++|.+|.+-|++||+.|.|+|||||||+|+++||.+||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 34443 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHhc
Q psy4056 186 HRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKRN 226 (227)
Q Consensus 186 ~P~i~~~i~~Dl~~l~~l~~~~~~~~p~~~~~~l~~E~~~~ 226 (227)
|||+.+.|.+|+.++..+++.-+-+..++-+..+++-.++.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkE 122 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKE 122 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHh
Confidence 99999999999999999998866442345566666555554
No 8
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.51 E-value=0.00017 Score=60.08 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=29.7
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~ 190 (227)
.|+|+||.||||+|+..+|++||||+.+|+..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~ 34 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTL 34 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcc
Confidence 58999999999999988999999999999853
No 9
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.17 E-value=0.00062 Score=57.28 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=29.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~ 190 (227)
..||+||.|+||+|+..+|++||||+.+|+..
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~ 34 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSIL 34 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEeccc
Confidence 47999999999999999999999999999853
No 10
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=96.50 E-value=0.0023 Score=52.23 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=29.7
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~ 191 (227)
+++++++.|+||+|+..+|++||||+.+|+...
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~ 35 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTS 35 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccc
Confidence 579999999999999988999999999987644
No 11
>smart00090 RIO RIO-like kinase.
Probab=96.31 E-value=0.007 Score=52.79 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=28.2
Q ss_pred cccceeeccceEEEE--ecCCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKAT--LHDGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~--L~~G~~VAVKVq~P~i 189 (227)
++++.|+.||||+|+ .++|++||||+.+++.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~ 66 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGT 66 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCc
Confidence 489999999999998 6799999999999864
No 12
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=95.37 E-value=0.014 Score=48.61 Aligned_cols=32 Identities=28% Similarity=0.306 Sum_probs=28.7
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCc
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNV 189 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i 189 (227)
.++++.++.|+||+|+.++|+.||||+.+++.
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~ 51 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGR 51 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEeccc
Confidence 47899999999999999899999999977654
No 13
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=94.53 E-value=0.049 Score=47.73 Aligned_cols=46 Identities=22% Similarity=0.280 Sum_probs=34.3
Q ss_pred HHhcCCChhhhccccCcc-------ccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 142 KEDLGKDPSEIFASIEPN-------PMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 142 ~~elG~~~~~~F~~fd~~-------PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
++|+|.+..-++...++. .++.++.|+||+|+.+ +|+.||||+.+-
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~ 55 (292)
T cd06657 2 HEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDL 55 (292)
T ss_pred hhHhhhhceEeecCCChHHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecc
Confidence 355565555555555543 4999999999999996 899999998653
No 14
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=93.60 E-value=0.11 Score=46.41 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=35.5
Q ss_pred HHhcCCChhhhccccC-ccccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 142 KEDLGKDPSEIFASIE-PNPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 142 ~~elG~~~~~~F~~fd-~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
++|+++...++...+. ..++|+++.|+||+|+.. +|+.||||+.....
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~ 52 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF 52 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh
Confidence 4566654444444444 378999999999999975 78999999987543
No 15
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=93.21 E-value=0.14 Score=45.85 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=41.0
Q ss_pred HhcCCChhhhccccC-ccccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 143 EDLGKDPSEIFASIE-PNPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 143 ~elG~~~~~~F~~fd-~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+|+++.+.++...|. .++++.++.|.||+|+.+ +|+.||||+.+... ...+..++.+++.
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~ 70 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH 70 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh
Confidence 355555544444553 589999999999999976 79999999876432 2334455665543
No 16
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=92.19 E-value=0.29 Score=38.44 Aligned_cols=44 Identities=18% Similarity=0.312 Sum_probs=36.2
Q ss_pred cceeeccceEEEEecC-CCEEEEEecCCCcH----HHHHHHHHHHHHHH
Q psy4056 161 MGAASLAQVHKATLHD-GSTIALKVQHRNVR----DNANIDIKCMEALV 204 (227)
Q Consensus 161 iasASIaQVHrA~L~~-G~~VAVKVq~P~i~----~~i~~Dl~~l~~l~ 204 (227)
+++++.|+||+++..+ |++++||+.+++-. +.+...+..++.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~ 49 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN 49 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC
Confidence 5789999999999964 99999999999976 57777777776654
No 17
>KOG1187|consensus
Probab=92.10 E-value=0.23 Score=46.13 Aligned_cols=48 Identities=21% Similarity=0.322 Sum_probs=38.9
Q ss_pred ccCc-cccceeeccceEEEEecCCCEEEEEecCCCcH---HHHHHHHHHHHH
Q psy4056 155 SIEP-NPMGAASLAQVHKATLHDGSTIALKVQHRNVR---DNANIDIKCMEA 202 (227)
Q Consensus 155 ~fd~-~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~---~~i~~Dl~~l~~ 202 (227)
.|++ +-++.+..|-||+|.+.||+.||||...++-. +.+..++.++..
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~ 127 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSR 127 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhc
Confidence 4554 77999999999999999999999998888774 457777766643
No 18
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=91.78 E-value=0.42 Score=39.97 Aligned_cols=36 Identities=22% Similarity=0.428 Sum_probs=30.7
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNAN 194 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~ 194 (227)
++++.++.|+||+|.+.+|+.||+|+.+++......
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~ 36 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK 36 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHH
Confidence 368999999999999989999999999888765443
No 19
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=91.77 E-value=0.32 Score=39.42 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=34.0
Q ss_pred cccceeeccceEEEEecC-CCEEEEEecCCCcH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHD-GSTIALKVQHRNVR----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-G~~VAVKVq~P~i~----~~i~~Dl~~l~~ 202 (227)
+++++++.|+||+++..+ |++|++|+.+.+.. +.+..++..++.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~ 53 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKK 53 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHh
Confidence 679999999999999984 89999999998743 344444444443
No 20
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=91.76 E-value=0.37 Score=38.17 Aligned_cols=47 Identities=4% Similarity=0.060 Sum_probs=38.5
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEALVH 205 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~l~~ 205 (227)
-+|+++|..++||+.+. +|++|+||+-+++. ...+..+..+++.+..
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~ 51 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTELLINRENEAENSKLAAE 51 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcccccCHHHHHHHHHHHHH
Confidence 36899999999999997 58899999988885 3456778888887765
No 21
>KOG0667|consensus
Probab=91.27 E-value=0.31 Score=48.29 Aligned_cols=46 Identities=35% Similarity=0.504 Sum_probs=33.9
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcH--HHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVR--DNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~--~~i~~Dl~~l~~l 203 (227)
.+.||.||.|||-+|.-+ +|+.|||||.+-.-+ .+-...+.+|..+
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~l 239 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELL 239 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHH
Confidence 357999999999999987 799999999875544 3334444444443
No 22
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=91.22 E-value=0.52 Score=39.54 Aligned_cols=44 Identities=14% Similarity=0.299 Sum_probs=32.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|+.+ +|+.||+|+...... ..+..++.+++.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~ 49 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ 49 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh
Confidence 35899999999999997 899999998765543 334444444443
No 23
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=91.03 E-value=0.47 Score=41.86 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=37.9
Q ss_pred HHHHHhcCCChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 139 AVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 139 ~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+...-++.++++.|.. .++++.++.|+||+|+.. +|+.||+|+...
T Consensus 13 ~~~~~~~~~~~~~~f~~--~~~lg~G~~~~v~~~~~~~~~~~valK~~~~ 60 (317)
T cd06635 13 EIAELFFKEDPEKLFTD--LREIGHGSFGAVYFARDVRTNEVVAIKKMSY 60 (317)
T ss_pred HHHHHhcCCCchhhhhh--hheeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 34556677888888874 456999999999999976 789999998764
No 24
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=90.95 E-value=0.25 Score=44.64 Aligned_cols=69 Identities=20% Similarity=0.278 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHH
Q psy4056 134 MKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHVV 207 (227)
Q Consensus 134 ~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~ 207 (227)
|..|.+.|++.+|.+.. --+.+|++.++|.++++-+ .+|+.+-||+..+.-...++....-|+.+.+..
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~ 70 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDMFEGEAEGLKALAEAN 70 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTT
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEE-CCCccEEEEecChhhHHHHHHHHHHHHHHHhcC
Confidence 56789999999998722 1134799999999999988 589999999999888899999999999986543
No 25
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=90.82 E-value=0.36 Score=40.81 Aligned_cols=29 Identities=21% Similarity=0.294 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+++++++.|+||+|+.+ +|++|++|+..+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~ 36 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDK 36 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEech
Confidence 57999999999999998 899999999876
No 26
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=90.50 E-value=0.4 Score=40.74 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=30.0
Q ss_pred ccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 153 FASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 153 F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
|.++..+++|.++.|+||+|.-+ +|+.||||..+.
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~ 36 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVEL 36 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeec
Confidence 45677889999999999999876 799999997654
No 27
>KOG4236|consensus
Probab=90.37 E-value=0.31 Score=48.27 Aligned_cols=58 Identities=16% Similarity=0.275 Sum_probs=48.8
Q ss_pred CChhhhccccCccccceeeccceEEEEec-CCCEEEEEecC-----CCcHHHHHHHHHHHHHHH
Q psy4056 147 KDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQH-----RNVRDNANIDIKCMEALV 204 (227)
Q Consensus 147 ~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~-----P~i~~~i~~Dl~~l~~l~ 204 (227)
.++..++.-|.++-+||+-.|-||-|.-+ +|++|||||.- +.-+.+++.++++|+.+-
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~ 621 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH 621 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC
Confidence 46777888888899999999999999987 99999999973 566788888888887653
No 28
>PRK10593 hypothetical protein; Provisional
Probab=90.28 E-value=0.64 Score=41.75 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCC-cHHHHHHHHHHHHHHHH
Q psy4056 135 KDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRN-VRDNANIDIKCMEALVH 205 (227)
Q Consensus 135 ~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~-i~~~i~~Dl~~l~~l~~ 205 (227)
+.+++.+.+.+|..+.+ .+||+.+.++|||+-...+| ++.||+.+.. -...+......|+.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~ 66 (297)
T PRK10593 2 EQLRAELSHLLGEKLSR------VECISEQPYAALWALYDSQG-NPMPLMARSFSTPGVAQQEAWKLSMLAR 66 (297)
T ss_pred hHHHHHHHHHhchhhhe------eeecCCccceeEEEEEcCCC-CEEEEEecccccchHHHHHHHHHHHHcc
Confidence 46777888888875443 47999999999999987666 5888997664 45688999999988865
No 29
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=90.22 E-value=0.52 Score=39.91 Aligned_cols=44 Identities=14% Similarity=0.216 Sum_probs=33.8
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~ 202 (227)
..++.++.|+||+|+.+++..||+|+.+++- .+.+..++.+++.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~ 57 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKK 57 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHh
Confidence 4699999999999999888899999988753 2345555555543
No 30
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=90.01 E-value=0.49 Score=42.55 Aligned_cols=44 Identities=25% Similarity=0.252 Sum_probs=33.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~~ 202 (227)
+.||.++.|.||+|+.+ +|+.||||+.+.... +.+..++.+++.
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~ 128 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD 128 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh
Confidence 56999999999999987 799999999876543 344445555443
No 31
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=89.91 E-value=0.55 Score=39.16 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=27.3
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.++.++.|+||+|+.+ +|+.|++|+....
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~ 36 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLA 36 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEc
Confidence 467999999999999998 8999999987653
No 32
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=89.64 E-value=0.61 Score=39.87 Aligned_cols=45 Identities=27% Similarity=0.335 Sum_probs=34.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l 203 (227)
++++.++.|+||+|+.+ +|+.|+||+.+.. ....+...+.+++.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l 56 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 56 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc
Confidence 57899999999999987 7999999987643 334556666665543
No 33
>KOG0192|consensus
Probab=89.57 E-value=0.53 Score=43.95 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=32.7
Q ss_pred cceeeccceEEEEecCCCE-EEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 161 MGAASLAQVHKATLHDGST-IALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 161 iasASIaQVHrA~L~~G~~-VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+|+++-|+||+|.+ .|+. ||||+..+.- .+.+..++.+|..
T Consensus 49 iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~ 95 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKW-RGTDVVAVKIISDPDFDDESRKAFRREASLLSR 95 (362)
T ss_pred cccCCceeEEEEEe-CCceeEEEEEecchhcChHHHHHHHHHHHHHHh
Confidence 99999999999999 5777 9999998865 3466666666554
No 34
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=89.28 E-value=0.69 Score=37.96 Aligned_cols=44 Identities=20% Similarity=0.349 Sum_probs=34.2
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcH---HHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVR---DNANIDIKCME 201 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~---~~i~~Dl~~l~ 201 (227)
.+++++++.|+||++..+ +|+.|++|+.+++.. +.+..++..++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~ 52 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILK 52 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHH
Confidence 367999999999999997 799999999988765 34444444443
No 35
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=89.26 E-value=0.54 Score=42.17 Aligned_cols=48 Identities=19% Similarity=0.251 Sum_probs=35.9
Q ss_pred HHHhcCCChhhhccccC-ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 141 LKEDLGKDPSEIFASIE-PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 141 l~~elG~~~~~~F~~fd-~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+++|++..+.++-..++ -++++.+..|.||+|+.+ +|+.||||+.+..
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~ 51 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRP 51 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccc
Confidence 45666666555544443 468999999999999876 8999999987643
No 36
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=88.95 E-value=0.67 Score=39.14 Aligned_cols=43 Identities=14% Similarity=0.234 Sum_probs=32.7
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~ 201 (227)
+.+++++.|.||+|..++|++||||+.+++.. ..+...+.+++
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~ 56 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMK 56 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHH
Confidence 45999999999999999999999998886553 23444444443
No 37
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=88.77 E-value=0.75 Score=39.27 Aligned_cols=44 Identities=23% Similarity=0.265 Sum_probs=32.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|+.+ +|+.||||+.+.+. ...+..++..++.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~ 54 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKE 54 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHh
Confidence 45899999999999986 89999999887443 3344455555443
No 38
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=88.67 E-value=0.87 Score=38.19 Aligned_cols=45 Identities=13% Similarity=0.193 Sum_probs=34.9
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~l 203 (227)
+.++.++.|+||+|...+|+.+|||+...+.. ..+..++.+++.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l 56 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL 56 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhC
Confidence 56999999999999998899999999886643 3455566665543
No 39
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=88.65 E-value=0.58 Score=41.99 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=27.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+++++++.|+||+|... +|+.||||+...+.
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~ 54 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 54 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc
Confidence 368999999999999865 89999999987654
No 40
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=88.58 E-value=0.8 Score=38.66 Aligned_cols=44 Identities=14% Similarity=0.239 Sum_probs=33.5
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~ 202 (227)
..++.++-|+||+|...+|..||+|..+++-. +.+...+.+++.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~ 57 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKK 57 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHh
Confidence 45999999999999998999999999988543 344455554443
No 41
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=88.55 E-value=0.77 Score=39.10 Aligned_cols=45 Identities=22% Similarity=0.302 Sum_probs=34.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC-----CCcHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH-----RNVRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~-----P~i~~~i~~Dl~~l~~l 203 (227)
..+++++.|+||+|+.+ +|+.||+|+.. +...+.+..++.+++.+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~ 57 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL 57 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC
Confidence 45899999999999998 79999999864 33445566666666544
No 42
>KOG0595|consensus
Probab=88.34 E-value=0.69 Score=43.98 Aligned_cols=43 Identities=26% Similarity=0.391 Sum_probs=34.2
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHH
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEAL 203 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l 203 (227)
||+||.|=||+|+.+ +|.+||||=..-. ..+....++.+|+.+
T Consensus 18 iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel 66 (429)
T KOG0595|consen 18 IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL 66 (429)
T ss_pred ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc
Confidence 999999999999998 8999999965444 555566667666654
No 43
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=88.30 E-value=0.85 Score=37.94 Aligned_cols=44 Identities=18% Similarity=0.314 Sum_probs=33.4
Q ss_pred cccceeeccceEEEEecC-----CCEEEEEecCCCcHH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHD-----GSTIALKVQHRNVRD----NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-----G~~VAVKVq~P~i~~----~i~~Dl~~l~~ 202 (227)
+.+|.++.|+||+|+..+ +..||+|+.+++... .+..++..++.
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~ 57 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRK 57 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHh
Confidence 568999999999999973 489999999988643 44445555443
No 44
>PRK14879 serine/threonine protein kinase; Provisional
Probab=88.16 E-value=0.98 Score=37.25 Aligned_cols=30 Identities=10% Similarity=0.050 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i 189 (227)
.+++.++-|.||+|.. +|++|+||+..|..
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~ 31 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKR 31 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcC
Confidence 4689999999999987 89999999988754
No 45
>PRK09188 serine/threonine protein kinase; Provisional
Probab=87.72 E-value=0.93 Score=42.38 Aligned_cols=46 Identities=13% Similarity=0.263 Sum_probs=34.1
Q ss_pred ccccceeeccceEEEEec--CCCEEEEEecCCC--------cHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH--DGSTIALKVQHRN--------VRDNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~--~G~~VAVKVq~P~--------i~~~i~~Dl~~l~~l 203 (227)
.+.||.+..|+||+|..+ +|+.||||+..+. ..+.+..++.+|+.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L 78 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV 78 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc
Confidence 456999999999999876 6888999986644 234456666666554
No 46
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=87.66 E-value=1.1 Score=36.93 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=28.4
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.++++.++.|+||+|+.. +|++|++|+.+..-
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~ 37 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSG 37 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccc
Confidence 367999999999999998 79999999987765
No 47
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=87.64 E-value=1.4 Score=37.35 Aligned_cols=54 Identities=24% Similarity=0.383 Sum_probs=37.7
Q ss_pred ChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCC--cHHHHHHHHHHHHHH
Q psy4056 148 DPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRN--VRDNANIDIKCMEAL 203 (227)
Q Consensus 148 ~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~--i~~~i~~Dl~~l~~l 203 (227)
+++..|... +.++.++.|+||+|..+ +|+.||+|+.... -...+..++.+++.+
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~ 59 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKY 59 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHh
Confidence 445566443 56999999999999987 7899999997432 234555566555544
No 48
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=87.51 E-value=0.94 Score=38.04 Aligned_cols=45 Identities=24% Similarity=0.346 Sum_probs=33.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC------CcHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR------NVRDNANIDIKCMEA 202 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P------~i~~~i~~Dl~~l~~ 202 (227)
.+.++.++.|+||+|+.. +|++||+|..++ ...+.+..++.+++.
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~ 58 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQ 58 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHh
Confidence 356999999999999998 899999998764 224455555555553
No 49
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=87.38 E-value=1.2 Score=37.83 Aligned_cols=45 Identities=18% Similarity=0.337 Sum_probs=32.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
+.++.++.|+||+|+.. +|+.|+||+.+.+... .+..++.+++.+
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l 56 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQL 56 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHh
Confidence 56999999999999975 8999999998765432 344444444433
No 50
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=87.35 E-value=1.8 Score=32.32 Aligned_cols=47 Identities=9% Similarity=0.109 Sum_probs=37.9
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCcH-HHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNVR-DNANIDIKCMEALVH 205 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~-~~i~~Dl~~l~~l~~ 205 (227)
.++++.++.+.|++++. ++..++||+..+... ..+..+..+++.+..
T Consensus 3 ~~~i~~g~~~~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~ 50 (155)
T cd05120 3 IKLLKGGLTNRVYLLGT-KDEDYVLKINPSREKGADREREVAILQLLAR 50 (155)
T ss_pred ceecccccccceEEEEe-cCCeEEEEecCCCCchhHHHHHHHHHHHHHH
Confidence 35789999999999998 558999999988764 567777777777655
No 51
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=87.34 E-value=1 Score=38.21 Aligned_cols=45 Identities=29% Similarity=0.296 Sum_probs=33.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
+.+++++.|+||+|+.. +|+.||||+.++.. ...+..++.+++.+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l 55 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL 55 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc
Confidence 45889999999999987 68999999998763 33455555555433
No 52
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=87.21 E-value=1.1 Score=38.12 Aligned_cols=44 Identities=18% Similarity=0.242 Sum_probs=32.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+.+++++.|+||+|+.+ +|+.||||+.+... ...+...+.+++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~ 55 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKE 55 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHh
Confidence 46899999999999987 79999999886542 2344555555443
No 53
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=87.21 E-value=1.1 Score=37.76 Aligned_cols=44 Identities=16% Similarity=0.241 Sum_probs=33.8
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~ 202 (227)
+.+++++.|.||+|...+++.|+||+.+++-. +.+..++.+++.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~ 57 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKK 57 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhh
Confidence 57999999999999998889999999887533 345555555544
No 54
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=87.17 E-value=1.3 Score=37.36 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=33.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc---------HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV---------RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i---------~~~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|... +|+.||+|+.++.. .+.+..++..++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~ 59 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR 59 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH
Confidence 56899999999999875 89999999987543 3455555555543
No 55
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=87.02 E-value=1.3 Score=37.85 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=34.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l~ 204 (227)
+-+|.++.|+||+|+.+ +|+.||+|+.... ....+..++.+++.+.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~ 57 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLE 57 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhh
Confidence 45899999999999987 7999999987643 3344556666665543
No 56
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=86.85 E-value=1.2 Score=38.45 Aligned_cols=44 Identities=27% Similarity=0.283 Sum_probs=32.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH-----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR-----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~-----~~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|+.+ +|+.||||+.+.... ..+..++.+++.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~ 62 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ 62 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHh
Confidence 57899999999999998 799999999875432 234444444443
No 57
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=86.70 E-value=1.1 Score=36.69 Aligned_cols=49 Identities=12% Similarity=0.147 Sum_probs=39.2
Q ss_pred CccccceeeccceEEEEecCCCEEEEEecCCCc----HHHHHHHHHHHHHHHH
Q psy4056 157 EPNPMGAASLAQVHKATLHDGSTIALKVQHRNV----RDNANIDIKCMEALVH 205 (227)
Q Consensus 157 d~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i----~~~i~~Dl~~l~~l~~ 205 (227)
+-+|++.+..++||+.+..+|++++||+-+++- ...+.....+++.+..
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~ 54 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAG 54 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhC
Confidence 347899999999999999888999999987753 4566777777766654
No 58
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=86.49 E-value=1 Score=38.32 Aligned_cols=45 Identities=22% Similarity=0.338 Sum_probs=34.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l 203 (227)
+.++.++.|+||+|+.+ +|+.|+||+.++. ..+.+..++.+++.+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l 57 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL 57 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc
Confidence 46899999999999987 6899999987653 345566666666544
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=86.29 E-value=0.87 Score=40.56 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=26.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+.+|+++.|.||+|+.+ +|+.||||+.+.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~ 53 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKK 53 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence 367999999999999997 799999999765
No 60
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=86.13 E-value=1.1 Score=37.46 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=33.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH-----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR-----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~-----~~i~~Dl~~l~~ 202 (227)
++++.++.|.||+|+.. +|+.|+||+.+.... +.+..++.+++.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~ 55 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLEL 55 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHh
Confidence 67999999999999986 899999999876644 344455554443
No 61
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=86.10 E-value=1.5 Score=37.36 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=32.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i----~~~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|+.+ +|+.||||+.+.+. ...+..++.+++.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~ 54 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE 54 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh
Confidence 56899999999999997 79999999887543 2333444454443
No 62
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=85.98 E-value=1.4 Score=37.22 Aligned_cols=30 Identities=20% Similarity=0.256 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
+.++.++.|+||+|...+|+.||||+....
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~ 35 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELD 35 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecC
Confidence 568999999999999889999999987654
No 63
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=85.94 E-value=1.7 Score=37.20 Aligned_cols=46 Identities=20% Similarity=0.395 Sum_probs=35.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC--CcHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR--NVRDNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P--~i~~~i~~Dl~~l~~l~ 204 (227)
+.++.++.|.||+|+.+ +|+.||+|+..+ .....+..++.+++.+.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~ 72 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS 72 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh
Confidence 57999999999999987 789999999766 33455666666665553
No 64
>KOG1166|consensus
Probab=85.91 E-value=0.59 Score=48.93 Aligned_cols=31 Identities=32% Similarity=0.400 Sum_probs=28.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i 189 (227)
.-+|-+|-|+||+|+-.||+.||+||+.|-.
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~ 734 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPN 734 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCC
Confidence 3499999999999999999999999999964
No 65
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=85.63 E-value=1.5 Score=38.78 Aligned_cols=29 Identities=31% Similarity=0.422 Sum_probs=25.6
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.|+.|+||+|+.+ +|+.||||+..+.
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 31 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKK 31 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 4789999999999987 8999999998654
No 66
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=85.61 E-value=1.4 Score=37.67 Aligned_cols=39 Identities=23% Similarity=0.435 Sum_probs=30.0
Q ss_pred hhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 149 PSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 149 ~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.+.|..+ +.++++..|+||+|... +|+.||||+.....
T Consensus 2 ~~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~ 41 (277)
T cd06642 2 PEELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE 41 (277)
T ss_pred hHHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEecccc
Confidence 34455543 45999999999999976 78999999977544
No 67
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=85.45 E-value=1.7 Score=35.17 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=29.0
Q ss_pred eccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHHH
Q psy4056 165 SLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCMEA 202 (227)
Q Consensus 165 SIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~~ 202 (227)
+.|+||+|+.. +|+.|++|+.+.+.. +.+...+..++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~ 43 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKK 43 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHh
Confidence 46899999998 599999999988764 455555555543
No 68
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=85.32 E-value=1.1 Score=40.78 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
..||.|+.|+||+|+.+ +|+.||||+.+.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~ 36 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRK 36 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence 45999999999999886 789999999864
No 69
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=85.31 E-value=1.3 Score=39.64 Aligned_cols=31 Identities=29% Similarity=0.396 Sum_probs=27.2
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..++++++.|+||+|+.. +|+.||||+..+.
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~ 51 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRP 51 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccc
Confidence 478999999999999997 7899999997654
No 70
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=85.29 E-value=1.8 Score=37.27 Aligned_cols=45 Identities=24% Similarity=0.391 Sum_probs=34.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC--cHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN--VRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~--i~~~i~~Dl~~l~~l 203 (227)
+.+++++.|+||+|+.+ +|+.||+|+..+. ....+..++.+++.+
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l 75 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSL 75 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHh
Confidence 47999999999999986 7899999998764 345555666655544
No 71
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=85.20 E-value=1.5 Score=38.23 Aligned_cols=30 Identities=33% Similarity=0.403 Sum_probs=26.5
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+.+|.++.|+||+|+.+ +|+.||||+.+.
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~ 40 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRL 40 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEecc
Confidence 367999999999999987 899999999764
No 72
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=85.13 E-value=1.7 Score=38.29 Aligned_cols=29 Identities=34% Similarity=0.442 Sum_probs=25.3
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.++.|+||+|+.+ +|+.||||+....
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 31 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKK 31 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHH
Confidence 4789999999999987 7899999997654
No 73
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=85.08 E-value=1.7 Score=38.47 Aligned_cols=30 Identities=30% Similarity=0.458 Sum_probs=25.9
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.++.|+||+|+-+ +|+.||||+.....
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~ 32 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKI 32 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 4789999999999976 89999999987643
No 74
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=84.91 E-value=1.7 Score=38.57 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=27.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.+|.|+.|+||+|+.+ +|+.||||+.....
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~ 38 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSL 38 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 46999999999999987 69999999987543
No 75
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=84.73 E-value=1.4 Score=38.26 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=27.6
Q ss_pred ccccceeeccceEEEEecC-----------------CCEEEEEecCCCcHHH
Q psy4056 158 PNPMGAASLAQVHKATLHD-----------------GSTIALKVQHRNVRDN 192 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~-----------------G~~VAVKVq~P~i~~~ 192 (227)
.+.+|+++.|.||+|+..+ +..||||+.+++....
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~ 61 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN 61 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH
Confidence 3569999999999998643 3479999999976544
No 76
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=84.57 E-value=1.7 Score=36.66 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=27.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
..+++++.|+||+|+.+ +|+.||+|+.+..-
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~ 46 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEP 46 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCc
Confidence 56899999999999975 89999999987654
No 77
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=84.43 E-value=1.7 Score=37.21 Aligned_cols=52 Identities=25% Similarity=0.394 Sum_probs=38.0
Q ss_pred ChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCc--HHHHHHHHHHHH
Q psy4056 148 DPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNV--RDNANIDIKCME 201 (227)
Q Consensus 148 ~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i--~~~i~~Dl~~l~ 201 (227)
+..+.|... ++++.+..|+||+|... +|+.|++|+..+.. .+.+..++..++
T Consensus 16 ~~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~ 70 (286)
T cd06614 16 DPRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMK 70 (286)
T ss_pred CccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHH
Confidence 344445432 67999999999999998 79999999998876 344555555443
No 78
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=84.30 E-value=1.4 Score=38.40 Aligned_cols=29 Identities=24% Similarity=0.291 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.++.|.||+|+.+ +|+.||||+...
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~ 36 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAI 36 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence 56999999999999987 799999998754
No 79
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=84.19 E-value=1.7 Score=37.57 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=32.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC----CcHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR----NVRDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P----~i~~~i~~Dl~~l~~ 202 (227)
+.++.++.|.||+|+.+ +|+.||+|+.+. +....+..++.+++.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~ 59 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN 59 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh
Confidence 56999999999999987 789999998763 233344455555543
No 80
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=84.06 E-value=1.7 Score=36.99 Aligned_cols=45 Identities=29% Similarity=0.308 Sum_probs=33.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
+.++.+..|.||+|+.+ +|+.|+||+.+... .+.+..++.+++.+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~ 56 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC 56 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC
Confidence 45899999999999986 89999999876433 34555555555433
No 81
>KOG0574|consensus
Probab=84.04 E-value=0.18 Score=46.79 Aligned_cols=78 Identities=24% Similarity=0.322 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCc-HHHHHHHHHHHH-----HHHHHHH
Q psy4056 136 DILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNV-RDNANIDIKCME-----ALVHVVA 208 (227)
Q Consensus 136 ~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-~~~i~~Dl~~l~-----~l~~~~~ 208 (227)
+..++=+..|.++++++|+-+++ +|.+|-|-||+|.-+ +|+-||+|-..-+- -+.|-.++.+|+ .+++...
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~K--LGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYG 95 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVGK--LGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYG 95 (502)
T ss_pred cccccChhhhcCChHHHHHHHHH--hcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhh
Confidence 56677778889999999987765 999999999999988 89999999332211 123344455554 3445555
Q ss_pred HhCCCCC
Q psy4056 209 WVFPEFK 215 (227)
Q Consensus 209 ~~~p~~~ 215 (227)
..|.+.+
T Consensus 96 SYFK~sD 102 (502)
T KOG0574|consen 96 SYFKHSD 102 (502)
T ss_pred hhccCCc
Confidence 5565544
No 82
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=84.00 E-value=2.8 Score=35.84 Aligned_cols=39 Identities=26% Similarity=0.479 Sum_probs=30.7
Q ss_pred hhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 149 PSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 149 ~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
++++|..+. .+++++.|-||+|+.+ +|+.||||+.....
T Consensus 2 ~~~~~~~~~--~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~ 41 (277)
T cd06641 2 PEELFTKLE--KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE 41 (277)
T ss_pred HHHhhhhhe--eEeecCCeEEEEEEECCCCcEEEEEEecccc
Confidence 456666544 4999999999999875 88999999876543
No 83
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=83.95 E-value=1 Score=37.87 Aligned_cols=30 Identities=23% Similarity=0.400 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++++.++.|+||+|+.+ +|+.||||+.+..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~ 32 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKS 32 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecch
Confidence 47899999999999986 7999999987643
No 84
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=83.93 E-value=2 Score=36.23 Aligned_cols=45 Identities=16% Similarity=0.288 Sum_probs=34.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~l 203 (227)
+.++.+.-|.||+|...+++.||||..+++- .+.+..++.+++.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l 58 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL 58 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHC
Confidence 6799999999999998888999999988753 23455555555443
No 85
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=83.51 E-value=2.1 Score=37.64 Aligned_cols=40 Identities=30% Similarity=0.409 Sum_probs=33.2
Q ss_pred CCChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 146 GKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 146 G~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+++++|..+.. ++.++.|.||+|+.. +|+.|++|+...
T Consensus 16 ~~~~~~~~~~~~~--lg~g~~g~v~~~~~~~~~~~v~ik~~~~ 56 (313)
T cd06633 16 KDDPEEIFVGLHE--IGHGSFGAVYFATNSHTNEVVAVKKMSY 56 (313)
T ss_pred cCCHHHHhhccee--eccCCCeEEEEEEECCCCcEEEEEEEec
Confidence 4678888776554 999999999999986 789999998754
No 86
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=83.43 E-value=2.3 Score=35.78 Aligned_cols=30 Identities=17% Similarity=0.347 Sum_probs=26.9
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|...++++||+|...++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~ 41 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPG 41 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCC
Confidence 569999999999999989999999988764
No 87
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=83.42 E-value=2.1 Score=36.20 Aligned_cols=45 Identities=18% Similarity=0.271 Sum_probs=33.3
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEA 202 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~ 202 (227)
.+.++.++.|.||+|...++..|++|+.+++-. +.+...+.+++.
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~ 57 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT 57 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHh
Confidence 357999999999999988888999999887643 234444444443
No 88
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=83.12 E-value=2 Score=35.84 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=26.4
Q ss_pred ccceeeccceEEEEecCCCEEEEEecCCCcH
Q psy4056 160 PMGAASLAQVHKATLHDGSTIALKVQHRNVR 190 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~~VAVKVq~P~i~ 190 (227)
.++.++.|.||+|...+|+.|++|+......
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~ 32 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP 32 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCC
Confidence 5889999999999998899999998665433
No 89
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=83.12 E-value=2.1 Score=38.34 Aligned_cols=46 Identities=20% Similarity=0.305 Sum_probs=32.9
Q ss_pred ccccceeeccceEEEEe------cCCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATL------HDGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L------~~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
.+.||.++.|.||+|+. .+|+.||||+.+.+... .+..++.++..+
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 67 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 67 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhc
Confidence 35799999999999973 36889999999875422 344455555444
No 90
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=83.12 E-value=1.9 Score=36.95 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=31.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~ 201 (227)
+.++.++.|.||+|+.+ +|+.||||+.... ..+.+..++.+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~ 55 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLR 55 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHH
Confidence 46899999999999997 7899999987643 3334445555544
No 91
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=83.04 E-value=2.1 Score=36.71 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=33.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
+-++.++-|.||+|+.. +|+.||||+.+... ...+..++.+++.+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l 57 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQML 57 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHc
Confidence 45899999999999987 79999999876543 23455566655544
No 92
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=83.03 E-value=1.9 Score=36.74 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=26.7
Q ss_pred ccceeeccceEEEEec-----CCCEEEEEecCCCcHH
Q psy4056 160 PMGAASLAQVHKATLH-----DGSTIALKVQHRNVRD 191 (227)
Q Consensus 160 PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i~~ 191 (227)
-||.|+.|.||+|+++ .+.+|+||+..+....
T Consensus 6 ~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~ 42 (259)
T PF07714_consen 6 QIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE 42 (259)
T ss_dssp EEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH
T ss_pred EEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc
Confidence 4899999999999998 3579999999875443
No 93
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=83.03 E-value=2.1 Score=37.18 Aligned_cols=47 Identities=23% Similarity=0.227 Sum_probs=33.5
Q ss_pred cCccccceeeccceEEEEecC---CCEEEEEecCCC-cHHHHHHHHHHHHH
Q psy4056 156 IEPNPMGAASLAQVHKATLHD---GSTIALKVQHRN-VRDNANIDIKCMEA 202 (227)
Q Consensus 156 fd~~PiasASIaQVHrA~L~~---G~~VAVKVq~P~-i~~~i~~Dl~~l~~ 202 (227)
.+...+|.++.|.||+|+.++ ++.||+|...+. ....+..++.+++.
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~ 54 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRE 54 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHh
Confidence 445679999999999999874 578999987653 33345555555554
No 94
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=82.67 E-value=1.9 Score=36.37 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=27.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~ 190 (227)
+.++.++.|+||+|+.. +|+.||+|+.++...
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~ 47 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG 47 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch
Confidence 46899999999999986 799999999876643
No 95
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=82.57 E-value=1.8 Score=38.81 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.||.|+.|.||+|+-+ +|+.||||+...
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~ 36 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRK 36 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEH
Confidence 56999999999999987 799999999864
No 96
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=82.51 E-value=2.2 Score=35.86 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=32.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHH----HHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD----NANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~----~i~~Dl~~l~ 201 (227)
+.++.++.|.||+|..+ +|+.|++|+...+... .+..++..++
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~ 54 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILH 54 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHH
Confidence 46899999999999998 7999999998776543 3444444443
No 97
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=82.46 E-value=2.4 Score=36.82 Aligned_cols=44 Identities=18% Similarity=0.195 Sum_probs=31.9
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCME 201 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~ 201 (227)
...++.++.|+||+|+.+ +|+.||+|..+.... ..+..++.+++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~ 59 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLK 59 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHH
Confidence 357999999999999987 789999998764432 23444444444
No 98
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=82.42 E-value=1.9 Score=38.79 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=26.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.++.|+||+|+.+ +|+.||||+.++
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~ 36 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRK 36 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 57999999999999987 799999999874
No 99
>PTZ00284 protein kinase; Provisional
Probab=82.37 E-value=2.2 Score=40.18 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=31.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC--CcHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR--NVRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P--~i~~~i~~Dl~~l~~l 203 (227)
+.||.|+.|.||+|+.. +|+.||||+.+. ...+.....+.+++.+
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l 182 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKV 182 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHH
Confidence 46999999999999986 788999999863 2233334444444443
No 100
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=82.36 E-value=2 Score=38.05 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=26.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+|.++.|+||+|+.+ +|+.||||+.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 37 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKS 37 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHH
Confidence 46899999999999987 7999999998653
No 101
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=82.34 E-value=2.7 Score=35.68 Aligned_cols=45 Identities=22% Similarity=0.210 Sum_probs=32.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
+.++.++.|.||+|+.+ +|++||||+.+... ...+..++.+++.+
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l 55 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQL 55 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHh
Confidence 45889999999999998 59999999987433 33344455555444
No 102
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=82.31 E-value=2.4 Score=37.57 Aligned_cols=29 Identities=31% Similarity=0.464 Sum_probs=25.6
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.++.|+||+|+.+ +|+.||||+..++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~ 31 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKD 31 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHH
Confidence 5789999999999987 7899999998764
No 103
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=82.18 E-value=3.3 Score=34.28 Aligned_cols=34 Identities=18% Similarity=0.403 Sum_probs=29.2
Q ss_pred cccceeeccceEEEEecC----CCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLHD----GSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~----G~~VAVKVq~P~i~~~ 192 (227)
+.+|.++.|+||+|+..+ +.+|+||+.++.....
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~ 38 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE 38 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh
Confidence 368999999999999974 8899999999887654
No 104
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=82.12 E-value=3 Score=34.91 Aligned_cols=45 Identities=16% Similarity=0.261 Sum_probs=35.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH--HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR--DNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~--~~i~~Dl~~l~~l 203 (227)
++++.+..|+||+|..+ +|+.|++|+..+... +.+..++.+++.+
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~ 59 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKY 59 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHh
Confidence 67999999999999987 789999999887653 4556666666654
No 105
>PHA02988 hypothetical protein; Provisional
Probab=82.05 E-value=2.5 Score=36.76 Aligned_cols=31 Identities=3% Similarity=0.107 Sum_probs=26.7
Q ss_pred CccccceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 157 EPNPMGAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 157 d~~PiasASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
+...++.+.-+.||+|++ +|++||||+....
T Consensus 24 ~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~ 54 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKF 54 (283)
T ss_pred CCeEEeeCCceEEEEEEE-CCEEEEEEecccc
Confidence 456789999999999998 8999999988754
No 106
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=81.98 E-value=2.9 Score=35.68 Aligned_cols=30 Identities=27% Similarity=0.306 Sum_probs=26.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|+||+|+.+ +|+.||+|+....
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~ 52 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT 52 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecC
Confidence 57999999999999986 7899999997543
No 107
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=81.92 E-value=2 Score=36.23 Aligned_cols=28 Identities=32% Similarity=0.485 Sum_probs=24.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.++.++.|+||+|+.+ +|+.|+||...
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~ 36 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQ 36 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeee
Confidence 57999999999999976 89999999654
No 108
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=81.85 E-value=2.9 Score=35.67 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=28.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~ 192 (227)
..++.++.|+||+|+.. +|+.||+|+....-...
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~ 45 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE 45 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH
Confidence 35899999999999986 79999999998765544
No 109
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=81.77 E-value=2 Score=37.44 Aligned_cols=44 Identities=20% Similarity=0.202 Sum_probs=32.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+.++.++.|.||+|+.+ +|+.||+|+.+... ...+..++.+++.
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~ 62 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN 62 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHh
Confidence 45899999999999987 79999999876432 2234445555544
No 110
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=81.69 E-value=3.1 Score=36.32 Aligned_cols=48 Identities=25% Similarity=0.254 Sum_probs=34.6
Q ss_pred cCccccceeeccceEEEEec---CCCEEEEEecCC-CcHHHHHHHHHHHHHH
Q psy4056 156 IEPNPMGAASLAQVHKATLH---DGSTIALKVQHR-NVRDNANIDIKCMEAL 203 (227)
Q Consensus 156 fd~~PiasASIaQVHrA~L~---~G~~VAVKVq~P-~i~~~i~~Dl~~l~~l 203 (227)
++...+|.|+.|.||+|+.+ +++.||||+... +....+...+.+++.+
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l 55 (317)
T cd07868 4 YEGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLREL 55 (317)
T ss_pred ccccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhc
Confidence 44567999999999999976 567999997754 3444555555555543
No 111
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=81.51 E-value=2.8 Score=35.29 Aligned_cols=30 Identities=20% Similarity=0.206 Sum_probs=25.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..++.++.|+||+|... +|+.||||+....
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~ 36 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELP 36 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCC
Confidence 56899999999999876 7899999987654
No 112
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=81.38 E-value=2.1 Score=38.17 Aligned_cols=29 Identities=17% Similarity=0.434 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|+|+.|+||+|+.+ +|+.||||+.++
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~ 36 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNK 36 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence 56999999999999987 799999999764
No 113
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=81.29 E-value=2.4 Score=35.48 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=26.5
Q ss_pred ccceeeccceEEEEecC--CC--EEEEEecCCCcHH
Q psy4056 160 PMGAASLAQVHKATLHD--GS--TIALKVQHRNVRD 191 (227)
Q Consensus 160 PiasASIaQVHrA~L~~--G~--~VAVKVq~P~i~~ 191 (227)
.+++++.|.||+|...+ |+ .||||+..++...
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~ 37 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS 37 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH
Confidence 58999999999999863 33 7999999987764
No 114
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=81.26 E-value=2.5 Score=37.13 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.++.|+||+|+-+ +|+.||||+.+.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~ 35 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKIND 35 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEech
Confidence 46899999999999976 899999998764
No 115
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=81.11 E-value=2.5 Score=37.52 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=33.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHH----HHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD----NANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~----~i~~Dl~~l~ 201 (227)
+.++.++.|+||+|+.+ +|..||+|+.+..... .+..++.+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~ 58 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLH 58 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHH
Confidence 46999999999999988 7899999999876543 3444444444
No 116
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=81.01 E-value=2.4 Score=36.60 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.+|.++.|.||+|..+ +|+.||||+..+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~ 37 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKR 37 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhh
Confidence 56999999999999986 89999999876543
No 117
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=80.89 E-value=3.1 Score=35.54 Aligned_cols=44 Identities=14% Similarity=0.343 Sum_probs=32.4
Q ss_pred cccceeeccceEEEEec-----CCCEEEEEecCCCcHH---HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-----DGSTIALKVQHRNVRD---NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i~~---~i~~Dl~~l~~ 202 (227)
+.+++++.|.||+|+.+ +|+.||||+.+..-.. .+..++.+++.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~ 61 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKS 61 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 56999999999999864 6889999998776543 34445554443
No 118
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=80.84 E-value=3.1 Score=35.68 Aligned_cols=44 Identities=18% Similarity=0.204 Sum_probs=30.8
Q ss_pred cccceeeccceEEEEec--CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH--DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~--~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+.++.++.|.||+|+.. +|+.||||+.+... ......++.+++.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~ 57 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 57 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHh
Confidence 46899999999999864 57899999876432 2334445555443
No 119
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=80.84 E-value=2.8 Score=37.94 Aligned_cols=29 Identities=31% Similarity=0.438 Sum_probs=25.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.|+.|+||+|+-. +|+.||||+...
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~ 35 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPN 35 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccc
Confidence 57999999999999975 899999998754
No 120
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=80.82 E-value=3 Score=36.89 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=26.4
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.|+.|+||+|+.+ +|+.||||+.+++.
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~ 32 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDV 32 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 4789999999999998 79999999988754
No 121
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=80.81 E-value=2.9 Score=36.45 Aligned_cols=38 Identities=24% Similarity=0.370 Sum_probs=29.5
Q ss_pred ChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 148 DPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 148 ~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+++.|... +-++.++.|+||+|+.+ +|+.||+|+...
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~ 50 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSY 50 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 444555433 45999999999999987 799999998753
No 122
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=80.78 E-value=2.8 Score=36.30 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=32.8
Q ss_pred cccceeeccceEEEEecC---CCEEEEEecCCCc------HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHD---GSTIALKVQHRNV------RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~---G~~VAVKVq~P~i------~~~i~~Dl~~l~~ 202 (227)
..+++++.|.||+|+.++ |+.||||+..+.. .+.+..++.+++.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~ 58 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE 58 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh
Confidence 348999999999999874 7999999998843 3444455555443
No 123
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=80.75 E-value=2.2 Score=36.34 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=27.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~ 190 (227)
+.++.++.|+||+|+.+ +|+.||+|+..+...
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~ 39 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN 39 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCC
Confidence 46899999999999987 799999998877654
No 124
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=80.71 E-value=3.5 Score=34.42 Aligned_cols=32 Identities=28% Similarity=0.260 Sum_probs=28.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~ 190 (227)
+.++.++.|.||+|+.+ +|+.|+||+..++..
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~ 39 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD 39 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc
Confidence 67999999999999998 699999999888754
No 125
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=80.55 E-value=2.5 Score=37.46 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=25.5
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.|+.|+||+|+.+ +|+.||||+..+.
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 31 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKE 31 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 4789999999999986 8999999998764
No 126
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=80.51 E-value=2.7 Score=36.17 Aligned_cols=43 Identities=28% Similarity=0.288 Sum_probs=32.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH--------HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR--------DNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~--------~~i~~Dl~~l~ 201 (227)
+.++.++.|+||+|..+ +|++|+||....... ..+..++.+++
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~ 57 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQ 57 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHh
Confidence 35899999999999986 799999999876543 34445555554
No 127
>KOG1163|consensus
Probab=80.49 E-value=1.4 Score=39.98 Aligned_cols=32 Identities=16% Similarity=0.374 Sum_probs=26.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~ 190 (227)
.+|||+|.|-.|.|.-- +|++|||||-.-.++
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~ 53 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK 53 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC
Confidence 57999999999999764 999999998654443
No 128
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=80.48 E-value=3.4 Score=34.36 Aligned_cols=36 Identities=19% Similarity=0.405 Sum_probs=30.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNAN 194 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~ 194 (227)
+.+|+|+-|.||+++.+ +|+.||+|+....-...-.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~ 41 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE 41 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc
Confidence 46999999999999998 6779999999888654443
No 129
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=80.46 E-value=4.2 Score=33.62 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=28.3
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVR 190 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~ 190 (227)
.+++++++.|+||+|+.+ +|++|+||...+.-.
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~ 38 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI 38 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc
Confidence 368999999999999887 789999999887643
No 130
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=80.46 E-value=4 Score=34.10 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=26.2
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.++++.++.|+||+|... +|+.|++|+....
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~ 37 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLE 37 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccC
Confidence 356899999999999976 7899999987643
No 131
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=80.28 E-value=2.9 Score=37.81 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=25.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
++||.++.|.||+|+.+ +|+.||||+.+.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~ 36 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRK 36 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcH
Confidence 57999999999999986 799999998764
No 132
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=80.21 E-value=3 Score=35.18 Aligned_cols=34 Identities=21% Similarity=0.427 Sum_probs=28.1
Q ss_pred ccccceeeccceEEEEec-CCC---EEEEEecCCCcHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGS---TIALKVQHRNVRD 191 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~---~VAVKVq~P~i~~ 191 (227)
.+.++.++.|+||+|+++ +|+ .|+||..+++...
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~ 47 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE 47 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH
Confidence 467999999999999997 444 7999999887643
No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=80.18 E-value=2.9 Score=36.15 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|+.. +|+.||||+..+.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~ 36 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKK 36 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehh
Confidence 56999999999999987 8999999987664
No 134
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=79.97 E-value=2.5 Score=38.16 Aligned_cols=29 Identities=17% Similarity=0.377 Sum_probs=25.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.|+.|.||+|+.+ +|+.||||+.+.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~ 36 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK 36 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 56999999999999887 799999999864
No 135
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=79.93 E-value=2.7 Score=37.14 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=26.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.+|.|+.|.||+|+.+ +|+.||||+.+++.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~ 37 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDV 37 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 56999999999999987 67899999987653
No 136
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=79.91 E-value=2.9 Score=36.50 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=26.5
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.+|.++.|.||+|+.+ +|+.||||+....
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~ 42 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLE 42 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeecc
Confidence 356999999999999987 7889999987644
No 137
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=79.79 E-value=3.6 Score=36.39 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=25.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.|+.|.||+|+.+ +|+.||+|+....
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~ 31 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKK 31 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 5889999999999987 7889999998653
No 138
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=79.36 E-value=2.4 Score=37.52 Aligned_cols=45 Identities=16% Similarity=0.274 Sum_probs=31.8
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
+.||.++.|.||+|+.. +|+.||||+..++.. +.+...+.++..+
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 67 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHI 67 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHh
Confidence 57999999999999852 467899999876543 2344455555443
No 139
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=79.36 E-value=2.8 Score=36.13 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=24.0
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+|.++.|.||++..+ +|+.||||+....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~ 29 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKK 29 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHH
Confidence 578999999999987 8999999987653
No 140
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=79.29 E-value=2.8 Score=35.73 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=32.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~ 202 (227)
+.++.++.|.||+|+.+ +|+.||+|+.+.. ....+..++.+++.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~ 55 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE 55 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh
Confidence 45899999999999987 8999999987542 23345556666553
No 141
>PTZ00036 glycogen synthase kinase; Provisional
Probab=79.20 E-value=3.7 Score=38.57 Aligned_cols=62 Identities=18% Similarity=0.291 Sum_probs=39.1
Q ss_pred HHHHHHhcCCChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHH
Q psy4056 138 LAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEA 202 (227)
Q Consensus 138 ~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~ 202 (227)
...+..+.+.....-|.- .+.+|.|+.|.||+|+.. +|+.||||....+- ......+.+++.
T Consensus 53 ~~~~~~~~~~~~~~~y~~--~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-~~~~~Ei~il~~ 115 (440)
T PTZ00036 53 EKMIDNDINRSPNKSYKL--GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-QYKNRELLIMKN 115 (440)
T ss_pred hhhhhhhhccCcCCeEEE--eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHh
Confidence 344445544433333332 356999999999999986 78999999765432 223345555544
No 142
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=79.16 E-value=3.2 Score=35.70 Aligned_cols=45 Identities=27% Similarity=0.289 Sum_probs=33.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l 203 (227)
+.++.++.|.||+|+.+ +|+.||||..+.. ..+.+..++.+++.+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l 58 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM 58 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc
Confidence 46889999999999987 8999999987542 234455566655543
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=79.12 E-value=5 Score=33.55 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=27.1
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.++.++.|+||+|+.. +|++|+||+.++.
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~ 38 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFD 38 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeec
Confidence 468999999999999976 7999999988765
No 144
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=79.09 E-value=4.2 Score=34.72 Aligned_cols=36 Identities=22% Similarity=0.431 Sum_probs=28.4
Q ss_pred hhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 150 SEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 150 ~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
++.|..+ .++++++.|+||+|+.+ +|+.||||+...
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~ 39 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDL 39 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEec
Confidence 4445433 46999999999999986 689999998753
No 145
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=78.90 E-value=5.7 Score=32.93 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=24.2
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+++++.|+||+++.. +|+.|++|+..+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~ 29 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKA 29 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecch
Confidence 467899999999998 5999999988664
No 146
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=78.81 E-value=3.2 Score=34.58 Aligned_cols=44 Identities=11% Similarity=0.206 Sum_probs=32.0
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCME 201 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~ 201 (227)
.++++.++.|.||++..+ +|..||+|..... -.+.+...+.+++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~ 54 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLA 54 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHH
Confidence 357999999999999998 7899999987542 2234444554444
No 147
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=78.73 E-value=3.1 Score=37.33 Aligned_cols=30 Identities=27% Similarity=0.300 Sum_probs=26.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+|+++.|.||+|+-+ +|+.||||+....
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~ 57 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 57 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEeccc
Confidence 67999999999999876 7999999997643
No 148
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=78.67 E-value=3.8 Score=35.17 Aligned_cols=45 Identities=27% Similarity=0.274 Sum_probs=32.6
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC----cHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN----VRDNANIDIKCMEA 202 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~----i~~~i~~Dl~~l~~ 202 (227)
.+.++.++-|.||+|+.+ +|+.|++|+.... ....+..++.+++.
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~ 59 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG 59 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh
Confidence 356999999999999986 7999999987543 22344455555543
No 149
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=78.65 E-value=1.8 Score=38.23 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.|+.|.||+|+.+ +|+.||||+.++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~ 32 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDV 32 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 4889999999999987 68899999987654
No 150
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=78.47 E-value=1.7 Score=38.43 Aligned_cols=29 Identities=28% Similarity=0.416 Sum_probs=25.3
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.|+.|+||+|+.+ +|+.||||+..++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 31 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKD 31 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHH
Confidence 4789999999999987 6899999997764
No 151
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=78.32 E-value=3.6 Score=36.34 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=25.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
-+|.++.|.||+|+.+ +|+.||||+.+..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~ 31 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKD 31 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 3789999999999987 6899999988754
No 152
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=78.32 E-value=2 Score=38.09 Aligned_cols=30 Identities=20% Similarity=0.292 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..+|.++.|+||+|..+ +|+.||||+....
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~ 36 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKD 36 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 57999999999999976 7999999997754
No 153
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=78.14 E-value=3.8 Score=34.45 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=33.3
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~ 202 (227)
+.++.++.|.||+|..+++..+|||+..++. ...+..++.+++.
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~ 55 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMK 55 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHh
Confidence 4689999999999998888899999987653 2345556665554
No 154
>KOG0600|consensus
Probab=78.14 E-value=2.8 Score=41.12 Aligned_cols=53 Identities=30% Similarity=0.339 Sum_probs=43.7
Q ss_pred hhhccccCccccceeeccceEEEEec-CCCEEEEEec-----CCCcHHHHHHHHHHHHHHH
Q psy4056 150 SEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQ-----HRNVRDNANIDIKCMEALV 204 (227)
Q Consensus 150 ~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq-----~P~i~~~i~~Dl~~l~~l~ 204 (227)
.+.|+.++. ||-|-.||||+|+-. +|+-||+|=. .||....+...+.+|+.+-
T Consensus 116 ~~~feki~k--IGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~ 174 (560)
T KOG0600|consen 116 ADSFEKIEK--IGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD 174 (560)
T ss_pred hHHHHHHHH--hcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC
Confidence 466777765 999999999999976 8999999854 4888888999999988653
No 155
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=78.14 E-value=3.9 Score=34.80 Aligned_cols=44 Identities=23% Similarity=0.303 Sum_probs=32.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~ 202 (227)
+.++.+..|+||+|+.+ +|+.||+|+.... ..+.+..++.+++.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~ 56 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ 56 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh
Confidence 56899999999999997 6899999975443 23345555555543
No 156
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=78.12 E-value=3.2 Score=38.71 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=26.2
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~ 190 (227)
+.+|.|+.|+||+|+.+ ++++||||+.+....
T Consensus 43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~ 80 (401)
T cd05107 43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR 80 (401)
T ss_pred hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC
Confidence 57999999999999975 346899999986543
No 157
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=78.07 E-value=3.8 Score=36.39 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=26.3
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.++.|+||+|+.+ +|+.||||+.+...
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~ 32 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKEL 32 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 5899999999999987 78999999988653
No 158
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=77.95 E-value=4.6 Score=36.12 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=28.7
Q ss_pred hccccC-ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 152 IFASIE-PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 152 ~F~~fd-~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++..+. .+.+|.++.|.||+|.-. +|+.||||+....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 53 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCc
Confidence 333443 367999999999999876 7899999987653
No 159
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=77.91 E-value=3.2 Score=36.71 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=26.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+|.+..|.||+|+.+ +|++||||+....
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~ 45 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKII 45 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecc
Confidence 46999999999999976 7999999987654
No 160
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=77.76 E-value=4.5 Score=33.00 Aligned_cols=27 Identities=11% Similarity=0.084 Sum_probs=23.1
Q ss_pred cceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
|+.++-|.||+|.. +|++|+||+..+.
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~ 28 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPK 28 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCC
Confidence 67889999999995 8999999996654
No 161
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=77.69 E-value=3.8 Score=34.66 Aligned_cols=44 Identities=14% Similarity=0.326 Sum_probs=33.2
Q ss_pred cccceeeccceEEEEec-----CCCEEEEEecCCCcHH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-----DGSTIALKVQHRNVRD----NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i~~----~i~~Dl~~l~~ 202 (227)
+.++.+..|.||+|++. +|+.||||+..+.-.. .+..++..++.
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~ 62 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRT 62 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHh
Confidence 56899999999999975 3789999999877553 45555555543
No 162
>KOG0199|consensus
Probab=77.60 E-value=2.1 Score=43.91 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=32.4
Q ss_pred ccceeeccceEEEEec--CCC--EEEEEecCCCcHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLH--DGS--TIALKVQHRNVRDNANIDI 197 (227)
Q Consensus 160 PiasASIaQVHrA~L~--~G~--~VAVKVq~P~i~~~i~~Dl 197 (227)
-+|.+|.|-||||.++ +|+ .||||..+++....+-.|+
T Consensus 117 ~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddf 158 (1039)
T KOG0199|consen 117 LLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDF 158 (1039)
T ss_pred HhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHH
Confidence 4899999999999998 565 8999999999988765554
No 163
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=77.36 E-value=3.5 Score=35.06 Aligned_cols=32 Identities=9% Similarity=0.256 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P~i~ 190 (227)
+.++.++.|+||+|+++ .+..||+|+.+.+..
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~ 46 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS 46 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC
Confidence 46999999999999985 467999999887654
No 164
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=77.31 E-value=3.3 Score=36.61 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+|.++.|.||+|..+ +|+.||||+.++.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 35 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKG 35 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHH
Confidence 45899999999999987 7999999998764
No 165
>KOG0193|consensus
Probab=77.30 E-value=1.9 Score=43.07 Aligned_cols=52 Identities=13% Similarity=0.194 Sum_probs=36.0
Q ss_pred hhhhccccC-ccccceeeccceEEEEecCCCEEEEEecC-----CCcHHHHHHHHHHHHH
Q psy4056 149 PSEIFASIE-PNPMGAASLAQVHKATLHDGSTIALKVQH-----RNVRDNANIDIKCMEA 202 (227)
Q Consensus 149 ~~~~F~~fd-~~PiasASIaQVHrA~L~~G~~VAVKVq~-----P~i~~~i~~Dl~~l~~ 202 (227)
|+..+.++. -.+||+||.|-||||.++ | +||||+.. |.-.+.|+.++.+++.
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkk 444 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKK 444 (678)
T ss_pred cccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhh
Confidence 333343333 378999999999999995 3 59999763 3445567777777663
No 166
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=77.13 E-value=3.7 Score=37.44 Aligned_cols=46 Identities=22% Similarity=0.325 Sum_probs=32.4
Q ss_pred ccccceeeccceEEEEec------CCCEEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH------DGSTIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
.+.||.|+.|.||+|+.. ++..||||+.++... +.+...+.++..+
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l 95 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 95 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHh
Confidence 367999999999999742 466899999887543 2344455555443
No 167
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=77.12 E-value=3.9 Score=35.33 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=25.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|+||+|... +|+.||||+....
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~ 36 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKK 36 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehh
Confidence 45899999999999976 7999999987654
No 168
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=77.03 E-value=4.2 Score=34.96 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=31.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~ 201 (227)
+.+++++.|+||+|+.+ +|+.||||+..... ...+...+.+++
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~ 62 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILK 62 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHH
Confidence 56999999999999987 79999999865432 223444555554
No 169
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=76.94 E-value=4 Score=34.53 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=25.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+.++.++.|.||+|+.+ +|+.|++|+.+.
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~ 37 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPF 37 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEec
Confidence 357899999999999986 799999998654
No 170
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=76.90 E-value=4.8 Score=34.10 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=31.6
Q ss_pred ccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEA 202 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~ 202 (227)
.++.++-|.||+|+..++..||||+.++.- .+.+..++.+++.
T Consensus 13 ~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~ 57 (262)
T cd05071 13 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKK 57 (262)
T ss_pred ecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHh
Confidence 489999999999998877789999988632 2344455555543
No 171
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=76.89 E-value=4 Score=34.96 Aligned_cols=44 Identities=23% Similarity=0.220 Sum_probs=33.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~~ 202 (227)
+++++++-|.||+|+.+ +|+.||||...+... ..+..++.+++.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~ 59 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKD 59 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhh
Confidence 67999999999999987 899999998765432 334445665554
No 172
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=76.87 E-value=3.9 Score=35.06 Aligned_cols=43 Identities=26% Similarity=0.332 Sum_probs=32.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV----RDNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i----~~~i~~Dl~~l~ 201 (227)
+.++.++.|+||+|... +|+.||+|+...+. .+.+..++.+++
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~ 58 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMH 58 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHH
Confidence 45899999999999987 79999999977554 344555555554
No 173
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=76.87 E-value=4.3 Score=33.62 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=24.9
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+|.++.|+||+++.. +|+.|++|+.+.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~ 30 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKK 30 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhh
Confidence 577899999999987 69999999987664
No 174
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=76.71 E-value=4.1 Score=33.89 Aligned_cols=44 Identities=23% Similarity=0.286 Sum_probs=32.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-~~~i~~Dl~~l~~ 202 (227)
+.++++..|+||+|+.+ +|+.|++|...... .+.+...+.+++.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~ 54 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQ 54 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHh
Confidence 45899999999999998 48999999887653 3344444444443
No 175
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=76.61 E-value=4 Score=34.63 Aligned_cols=43 Identities=9% Similarity=0.204 Sum_probs=31.0
Q ss_pred cccceeeccceEEEEecC------CCEEEEEecCCCcHH----HHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHD------GSTIALKVQHRNVRD----NANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~------G~~VAVKVq~P~i~~----~i~~Dl~~l~ 201 (227)
+.++.++.|+||+|+.++ ++.||||+....... .+...+.+++
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~ 63 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLT 63 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHH
Confidence 568999999999999864 478999998765443 4444444444
No 176
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=76.52 E-value=4.4 Score=36.01 Aligned_cols=29 Identities=28% Similarity=0.334 Sum_probs=25.7
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.++.|.||+|+.+ +|+.||||+.++.
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~ 31 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKE 31 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 4789999999999987 7899999998764
No 177
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=76.48 E-value=4.9 Score=35.78 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=26.2
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.|+.|+||+|+.+ +|+.||+|+.....
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~ 32 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKEL 32 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhH
Confidence 5899999999999987 78999999987653
No 178
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=76.39 E-value=3.4 Score=34.87 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=26.8
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P~i~ 190 (227)
+.++.++-|.||+|.++ +|+.||||+...++.
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~ 40 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF 40 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC
Confidence 46899999999999976 468999999887653
No 179
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=76.36 E-value=3.9 Score=34.44 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=25.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.++.|.||+|+.+ +|+.||||+..+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~ 37 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQI 37 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeec
Confidence 46899999999999987 899999997653
No 180
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=76.34 E-value=4.9 Score=35.58 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=24.6
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P 187 (227)
+.+|.|+.|.||+++.. +|+.||||+...
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~ 34 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKK 34 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEH
Confidence 46899999999999863 688999998764
No 181
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=76.32 E-value=5.3 Score=33.51 Aligned_cols=45 Identities=18% Similarity=0.280 Sum_probs=33.0
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~~l 203 (227)
+.++.+..|.||+|+.+++..||+|...++- .+.+...+.+++.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l 56 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKL 56 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHC
Confidence 4599999999999999999999999866542 23444455555443
No 182
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=76.18 E-value=4.7 Score=34.65 Aligned_cols=29 Identities=24% Similarity=0.293 Sum_probs=25.3
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
...++.++.|+||+|+.+ +|+.||||+..
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~ 46 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVL 46 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEe
Confidence 356999999999999987 79999999764
No 183
>KOG0583|consensus
Probab=76.10 E-value=4.4 Score=37.78 Aligned_cols=47 Identities=21% Similarity=0.382 Sum_probs=36.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC--------CcHHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR--------NVRDNANIDIKCMEALV 204 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P--------~i~~~i~~Dl~~l~~l~ 204 (227)
...+|++|.|-|+.|+-. +|+.|||||... ++.+.+..++.+++.+-
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~ 77 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR 77 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc
Confidence 357999999999999776 899999998655 45667777776665543
No 184
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=75.94 E-value=5.3 Score=35.04 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=26.2
Q ss_pred ccccceeeccceEEEEec-CCC----EEEEEecCCCcH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGS----TIALKVQHRNVR 190 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~----~VAVKVq~P~i~ 190 (227)
.+.+|+++.|+||+|+.+ +|+ +||||+..+...
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~ 49 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 49 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC
Confidence 367999999999999976 454 499999876543
No 185
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=75.83 E-value=3.8 Score=37.20 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.|+.|+||+|+.+ +|+.||||+...
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~ 36 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRK 36 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeH
Confidence 46999999999999986 789999998764
No 186
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=75.72 E-value=4.8 Score=35.90 Aligned_cols=44 Identities=23% Similarity=0.177 Sum_probs=32.0
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC---cHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN---VRDNANIDIKCME 201 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~---i~~~i~~Dl~~l~ 201 (227)
.++++.++.|.||+|+.+ +|+.||+|+.... ..+.+...+.+++
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~ 57 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIR 57 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHH
Confidence 468999999999999986 7999999976432 2334444555554
No 187
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=75.69 E-value=3 Score=37.08 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=29.0
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~ 190 (227)
.|+..++-+.|++++..||+++++|+..|+-+
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~ 39 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE 39 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCccc
Confidence 46788999999999999999999999998765
No 188
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=75.33 E-value=7 Score=33.00 Aligned_cols=34 Identities=18% Similarity=0.046 Sum_probs=28.2
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD 191 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~ 191 (227)
...++.++-|.||+|+.+ +|+.|+||.......+
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~ 47 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR 47 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH
Confidence 357999999999999976 7889999988776544
No 189
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=75.32 E-value=5.7 Score=34.04 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=31.4
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcHH----HHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVRD----NANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~~----~i~~Dl~~l~ 201 (227)
..++.++.|+||+|+.+ ++..||+|+.+.+... .+..++.+++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~ 63 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 63 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHH
Confidence 56899999999999974 4689999998876533 3444444444
No 190
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=75.22 E-value=4.8 Score=36.05 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=25.5
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
.++++.++.|.||+|+-+ +|+.||||+..
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~ 50 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLS 50 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecC
Confidence 367999999999999986 89999999864
No 191
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=75.06 E-value=5 Score=33.90 Aligned_cols=43 Identities=16% Similarity=0.225 Sum_probs=30.9
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCc--HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNV--RDNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i--~~~i~~Dl~~l~ 201 (227)
+.+++++.|.||.|..+++.+||||...++- .+.+..++.+++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~ 54 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM 54 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHh
Confidence 4589999999999998888889999776543 223444444443
No 192
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=74.80 E-value=5.1 Score=35.73 Aligned_cols=44 Identities=18% Similarity=0.304 Sum_probs=33.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD----NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~----~i~~Dl~~l~~ 202 (227)
+.++.++.|+||+|+.+ +|+.||+|+.+..... .+..++.+++.
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~ 59 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE 59 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH
Confidence 46899999999999988 7899999998876543 34445555443
No 193
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=74.70 E-value=4.8 Score=33.73 Aligned_cols=29 Identities=14% Similarity=0.243 Sum_probs=25.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
++++.++.+.||+|+.. +|++|++|+...
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~ 35 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNK 35 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEeh
Confidence 57899999999999987 699999998864
No 194
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=74.33 E-value=4.3 Score=36.74 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=25.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.++.|.||+|+-+ +|+.||||+...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~ 36 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLK 36 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence 56899999999999886 899999998754
No 195
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=74.16 E-value=6.8 Score=34.83 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=26.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.++.|+||+|.-+ +|+.||||+..+..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~ 32 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEV 32 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHH
Confidence 4789999999999976 79999999987653
No 196
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=73.97 E-value=5.8 Score=33.49 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=33.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~ 202 (227)
+.++++..|.||+|+.. +|++|++|+.++.. .+.+..++.+++.
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~ 54 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE 54 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh
Confidence 45888999999999998 69999999998753 3344555555553
No 197
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=73.90 E-value=5.6 Score=33.42 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=23.6
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++.++.|.||+|+.. +|+.|+||+..+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~ 29 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKR 29 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehh
Confidence 467888999999997 5999999998653
No 198
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=73.84 E-value=6.1 Score=33.49 Aligned_cols=30 Identities=27% Similarity=0.323 Sum_probs=25.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..++++..|+||+|+.. +|+.|++|+..-.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~ 37 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLE 37 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeecc
Confidence 46899999999999987 7999999987543
No 199
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=73.70 E-value=6.1 Score=33.77 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=25.2
Q ss_pred cccceeeccceEEEEec-----CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-----DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i 189 (227)
+.++.++.|+|+.++.+ +|+.||+|+.+.+.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~ 45 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC 45 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEecccc
Confidence 45899999999887642 78899999988764
No 200
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=73.59 E-value=8.7 Score=32.70 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCC----EEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGS----TIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~----~VAVKVq~P~i~~~ 192 (227)
+.++.++-|.||+|+.. +|+ +||||+........
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~ 51 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK 51 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH
Confidence 57999999999999865 666 58999976554443
No 201
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=73.58 E-value=3.2 Score=36.70 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=23.5
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+|.++.|.||+|+.+ +|+.||||+...
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~ 28 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK 28 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeH
Confidence 578999999999987 799999998753
No 202
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=73.52 E-value=5.6 Score=37.06 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=26.8
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~~ 191 (227)
+.||+++.|.||+|+.. .+..||||+.++....
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~ 81 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS 81 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh
Confidence 57999999999999863 2457999999887653
No 203
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=73.42 E-value=6 Score=33.98 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=23.5
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
++.++.|+||+++.+ +|+.||+|+...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~ 28 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDK 28 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcH
Confidence 578899999999987 799999998754
No 204
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=73.30 E-value=8 Score=32.71 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=26.6
Q ss_pred cceeeccceEEEEec---CCCEEEEEecCCCcHHHH
Q psy4056 161 MGAASLAQVHKATLH---DGSTIALKVQHRNVRDNA 193 (227)
Q Consensus 161 iasASIaQVHrA~L~---~G~~VAVKVq~P~i~~~i 193 (227)
+|.++.|.||+|+++ +|..||||+..+......
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~ 38 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSV 38 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHH
Confidence 789999999999875 456899999988765433
No 205
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=73.25 E-value=6.1 Score=34.87 Aligned_cols=30 Identities=20% Similarity=0.314 Sum_probs=25.1
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P~ 188 (227)
+.+|.|+.|.||+++.. +|+.||+|+....
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~ 39 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKA 39 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHH
Confidence 46899999999999864 6899999998653
No 206
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=73.18 E-value=4.1 Score=40.69 Aligned_cols=30 Identities=17% Similarity=0.304 Sum_probs=26.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.|+.++.|.||+|+.. +|+.||||+.+..
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~ 40 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKA 40 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehh
Confidence 57999999999999998 7999999998753
No 207
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=72.89 E-value=6.1 Score=35.01 Aligned_cols=30 Identities=23% Similarity=0.259 Sum_probs=26.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++-|.||+|+-+ +|++||||+..|.
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~ 41 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPF 41 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEeccc
Confidence 56899999999999876 8999999988753
No 208
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=72.84 E-value=8.8 Score=31.23 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=36.2
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCC-cHHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRN-VRDNANIDIKCMEALVH 205 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~-i~~~i~~Dl~~l~~l~~ 205 (227)
+|+++|.-++||+.+..+ +++++|+-+|. ....+.....+++.+..
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~~~~~~~~e~~~~~~l~~ 49 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPPDAAERLRREAAVLRQLAE 49 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCCCCHHHHHHHHHHHHHHHh
Confidence 589999999999999866 69999998887 55566666666655543
No 209
>PHA03209 serine/threonine kinase US3; Provisional
Probab=72.83 E-value=4.8 Score=36.37 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..++.++.|+||+|+.+ +++.||+|+...+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~ 102 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG 102 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcc
Confidence 57999999999999987 6789999986554
No 210
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=72.81 E-value=6 Score=33.23 Aligned_cols=31 Identities=19% Similarity=0.361 Sum_probs=25.4
Q ss_pred cccceeeccceEEEEec-C---CCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-D---GSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~---G~~VAVKVq~P~i 189 (227)
+.+|.++.|+||+|++. + +..||||+.+.+.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~ 39 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI 39 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCc
Confidence 46899999999999987 3 3689999887643
No 211
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=72.73 E-value=6.4 Score=34.86 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=26.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|+||+|+.+ +|++||+|+.+..
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~ 41 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHA 41 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccc
Confidence 56999999999999987 7999999987764
No 212
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=72.54 E-value=5.7 Score=34.30 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.++.++.|+||+|..+ +|+.||||...+..
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~ 37 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKR 37 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhh
Confidence 45899999999999987 79999999876653
No 213
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=72.37 E-value=7 Score=34.74 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=27.0
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
..+++.++.|.||+|+-. +|+.||||..++.
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~ 41 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANA 41 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEeccc
Confidence 358999999999999976 7999999988764
No 214
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=72.30 E-value=7.1 Score=32.97 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=32.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHH-----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD-----NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~-----~i~~Dl~~l~~ 202 (227)
..++.++.|.||+|... +|+.|++|...+.... .+...+.+++.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~ 54 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKE 54 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHH
Confidence 46899999999999986 8999999987665433 44444444443
No 215
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=72.25 E-value=5.6 Score=34.94 Aligned_cols=27 Identities=22% Similarity=0.321 Sum_probs=23.4
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+|.++.|.||+|+.+ +|+.||||+..+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~ 28 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRK 28 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEH
Confidence 578899999999987 689999998764
No 216
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=72.22 E-value=6 Score=34.16 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=27.0
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.+++++.|+||+|+.+ +|+.||||+....
T Consensus 20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~ 51 (296)
T cd06618 20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRT 51 (296)
T ss_pred eeEeeccCCeEEEEEEECCCCeEEEEEEEecc
Confidence 467999999999999997 4999999998753
No 217
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=72.14 E-value=5.3 Score=33.48 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=29.9
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH-HHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR-DNANIDIKCM 200 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~-~~i~~Dl~~l 200 (227)
+.++.++.|+||++.. +|+.||+|+.+.... +.+..++.++
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~~~~~~e~~~l 53 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTAQAFLEETAVM 53 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchHHHHHHHHHHH
Confidence 5789999999999985 899999998876533 2334444443
No 218
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=71.88 E-value=6.4 Score=33.21 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=29.7
Q ss_pred ccccceeeccceEEEEecC----CCEEEEEecCCCcHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHD----GSTIALKVQHRNVRDNANI 195 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~----G~~VAVKVq~P~i~~~i~~ 195 (227)
.+.++.++.|.||+|+.+. ...||||+.+++.......
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~ 50 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRL 50 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHH
Confidence 4679999999999999862 3589999998876554433
No 219
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=71.77 E-value=5.8 Score=34.18 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=26.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.+..|.||+|... +|+.||||+.++.
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~ 37 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKA 37 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHH
Confidence 56899999999999987 7899999988653
No 220
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=71.72 E-value=4.9 Score=35.50 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|+.+ +|+.||||+.+..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~ 37 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKS 37 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHH
Confidence 56999999999999987 8999999998754
No 221
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=71.70 E-value=6.5 Score=33.79 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=32.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~ 201 (227)
+.++.++-|.||++..+ +++.||+|+..+... ..+..++.+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~ 54 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINK 54 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHH
Confidence 67899999999999997 789999998876533 34445555444
No 222
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=71.55 E-value=3.9 Score=35.26 Aligned_cols=30 Identities=17% Similarity=0.253 Sum_probs=25.7
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+++++.|.||+|+.. +|+.||||+.++..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~ 31 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKR 31 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccc
Confidence 3788999999999986 79999999987653
No 223
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=71.43 E-value=3.2 Score=36.70 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=26.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
..+|.++.|.||+|+.+ +|+.||||+..+..
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~ 37 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDV 37 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHH
Confidence 46899999999999987 68899999987654
No 224
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=71.36 E-value=7 Score=33.41 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
..++.++.|.||+++.. +|+.||||......
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~ 41 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV 41 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhcc
Confidence 46899999999999986 78999999877543
No 225
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=71.35 E-value=7.4 Score=34.01 Aligned_cols=39 Identities=23% Similarity=0.344 Sum_probs=30.5
Q ss_pred CChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 147 KDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 147 ~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
...++.|.. ...++.++.|+||+|+.+ +|+.|+||....
T Consensus 11 ~~~~~~~~~--~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~ 50 (308)
T cd06634 11 DDPEKLFSD--LREIGHGSFGAVYFARDVRNSEVVAIKKMSY 50 (308)
T ss_pred CCcHHHHHH--HHheeeCCCEEEEEEEEcCCCcEEEEEEEec
Confidence 445555654 356999999999999987 789999998754
No 226
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=70.93 E-value=8.5 Score=37.87 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=26.7
Q ss_pred ccccceeeccceEEEEec-C----CCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-D----GSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~----G~~VAVKVq~P~ 188 (227)
.+.||.|+.|+||+|++. + |+.||||.....
T Consensus 137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~ 172 (566)
T PLN03225 137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEY 172 (566)
T ss_pred eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEeccc
Confidence 468999999999999997 5 799999986653
No 227
>PRK10345 hypothetical protein; Provisional
Probab=70.78 E-value=7 Score=33.50 Aligned_cols=46 Identities=15% Similarity=0.244 Sum_probs=35.8
Q ss_pred CccccceeeccceEEEEecCCCEEEEEecCCC---cHHHHHHHHHHHHHHH
Q psy4056 157 EPNPMGAASLAQVHKATLHDGSTIALKVQHRN---VRDNANIDIKCMEALV 204 (227)
Q Consensus 157 d~~PiasASIaQVHrA~L~~G~~VAVKVq~P~---i~~~i~~Dl~~l~~l~ 204 (227)
+.++||+||-+.||. --.++.. +|||.+++ -.+.+..++..++.+.
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~ 54 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLS 54 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhh
Confidence 457899999999996 3336666 69999886 6677888888887764
No 228
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=70.63 E-value=8.4 Score=32.54 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=26.4
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.++.++.|+||+|... +|+.|++|+....
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~ 38 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFD 38 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecC
Confidence 467999999999999886 6999999987643
No 229
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=70.11 E-value=9.1 Score=31.98 Aligned_cols=44 Identities=14% Similarity=0.226 Sum_probs=32.8
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEA 202 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~ 202 (227)
.+.+++++-|.||+|+. .|+.||||....... +.+..++.+++.
T Consensus 11 ~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~ 56 (256)
T cd05039 11 GATIGKGEFGDVMLGDY-RGQKVAVKCLKDDSTAAQAFLAEASVMTT 56 (256)
T ss_pred eeeeecCCCceEEEEEe-cCcEEEEEEeccchhHHHHHHHHHHHHHh
Confidence 35699999999999997 599999999887754 344445554444
No 230
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=70.08 E-value=7.5 Score=34.93 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=26.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+|+++.|+||+|+-+ +|+.||||+....
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 60 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCcc
Confidence 57999999999999976 7899999987653
No 231
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=70.01 E-value=7.6 Score=33.26 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=24.5
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P 187 (227)
+.++.++.|+||+|+.. +|+.||||+.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~ 38 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKK 38 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEeh
Confidence 56899999999999864 678999998764
No 232
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=70.00 E-value=8 Score=33.15 Aligned_cols=45 Identities=16% Similarity=0.314 Sum_probs=32.9
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCCC-------cHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHRN-------VRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P~-------i~~~i~~Dl~~l~~l 203 (227)
+.++.++.|.||.|+.. +|+.||+|+.... ..+.+..++.+++.+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l 61 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhc
Confidence 45899999999999874 7899999987643 234455566665544
No 233
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=69.75 E-value=4 Score=36.16 Aligned_cols=30 Identities=27% Similarity=0.408 Sum_probs=26.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.++.|.||+|+.+ +|+.||||+.++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~ 32 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDV 32 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHH
Confidence 4789999999999987 68999999988764
No 234
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=69.45 E-value=11 Score=32.42 Aligned_cols=42 Identities=26% Similarity=0.442 Sum_probs=31.8
Q ss_pred hhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCcHHH
Q psy4056 149 PSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN 192 (227)
Q Consensus 149 ~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~ 192 (227)
+.+.|.-. ..++.++.|.||+|+.. +|+.|++|+....-.+.
T Consensus 10 ~~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~ 52 (292)
T cd06644 10 PNEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE 52 (292)
T ss_pred cchhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHH
Confidence 34555433 34899999999999987 68999999987665443
No 235
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=69.37 E-value=9.9 Score=33.64 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=25.9
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
.+|.++.|+||+++-+ +|+.||+|+.++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~ 32 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEV 32 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHH
Confidence 4789999999999976 89999999987653
No 236
>KOG0594|consensus
Probab=69.30 E-value=3 Score=38.55 Aligned_cols=55 Identities=25% Similarity=0.299 Sum_probs=41.1
Q ss_pred hhhccccCccccceeeccceEEEEec-CCCEEEEEecCCC-----cHHHHHHHHHHHHHHHHH
Q psy4056 150 SEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRN-----VRDNANIDIKCMEALVHV 206 (227)
Q Consensus 150 ~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-----i~~~i~~Dl~~l~~l~~~ 206 (227)
-+.|..++. +|.++.|-||+|+-+ +|+.||+|.++=. +...-...+.+++.+.+-
T Consensus 10 ~~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~ 70 (323)
T KOG0594|consen 10 MFDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHA 70 (323)
T ss_pred HHHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCC
Confidence 344556665 999999999999998 8999999998754 444556666776665543
No 237
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=69.00 E-value=4.3 Score=39.01 Aligned_cols=31 Identities=26% Similarity=0.310 Sum_probs=26.5
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+.||.++.|.||+|+.. +|+.||||+....
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~ 68 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDME 68 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecc
Confidence 356999999999999876 8999999997543
No 238
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=68.89 E-value=8.7 Score=34.15 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=33.6
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC-----CcHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR-----NVRDNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P-----~i~~~i~~Dl~~l~~l 203 (227)
.++++.+..|.||+|+-+ +|+.||||.... ...+.+..++.+++.+
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l 66 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL 66 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc
Confidence 368999999999999876 899999997653 2334555555555543
No 239
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=68.85 E-value=8.5 Score=33.04 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|+.+ +|+.|++|.....
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~ 41 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKME 41 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeec
Confidence 67899999999999997 7899999977643
No 240
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=68.84 E-value=5.1 Score=34.45 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=24.6
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.++.++.|+||+|... +|+.||+|+..+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~ 30 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKK 30 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecc
Confidence 3688999999999876 6899999987664
No 241
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=68.55 E-value=6.6 Score=34.67 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=23.3
Q ss_pred ccee--eccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAA--SLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasA--SIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
||.| +.+.||+++.+ +|+.||||.....
T Consensus 6 ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~ 36 (327)
T cd08227 6 IGRGFEDLMTVNLARYKPTGEYVTVRRINLE 36 (327)
T ss_pred ccccccceEEEEEEeecccCcEEEEEEechh
Confidence 5555 78899999987 8999999988754
No 242
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=68.53 E-value=8.7 Score=32.00 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=26.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
++++.++.|.||+|... +++.+++|+....-
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~ 40 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEP 40 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCc
Confidence 67999999999999986 68899999987553
No 243
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=67.82 E-value=10 Score=31.95 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=26.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.++.++.|.||+|..+ +|+.|++|+...+-
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~ 43 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 43 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCc
Confidence 56999999999999987 68999999977653
No 244
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=67.67 E-value=11 Score=31.27 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=25.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++++..|.||+|... +|+.|++|+...
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~ 35 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDY 35 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEec
Confidence 56899999999999876 889999998754
No 245
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=67.40 E-value=8.6 Score=33.46 Aligned_cols=30 Identities=27% Similarity=0.442 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|+.. +|+.||+|..++.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~ 37 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKK 37 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEecc
Confidence 46899999999999987 5999999998875
No 246
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=67.33 E-value=10 Score=32.18 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=24.7
Q ss_pred ccceeeccceEEEEecC-------------CCEEEEEecCCCcHH
Q psy4056 160 PMGAASLAQVHKATLHD-------------GSTIALKVQHRNVRD 191 (227)
Q Consensus 160 PiasASIaQVHrA~L~~-------------G~~VAVKVq~P~i~~ 191 (227)
.++.+.-|+||+|++.+ +.+|+||+..+.-.+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~ 46 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRD 46 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhh
Confidence 47888999999999752 236999998876544
No 247
>KOG4721|consensus
Probab=67.33 E-value=2.9 Score=42.06 Aligned_cols=67 Identities=25% Similarity=0.336 Sum_probs=48.6
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcHHHH
Q psy4056 114 LPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNA 193 (227)
Q Consensus 114 lP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i 193 (227)
+...|..+.+.=|+..-..||++|-+ -+=+||++=|-|++|+| .+++|||| -|++.=
T Consensus 103 iGk~~s~e~k~qq~e~WeiPFe~IsE------------------LeWlGSGaQGAVF~Grl-~netVAVK----KV~elk 159 (904)
T KOG4721|consen 103 IGKAYSTEHKQQQEELWEIPFEEISE------------------LEWLGSGAQGAVFLGRL-HNETVAVK----KVRELK 159 (904)
T ss_pred hccceeeehhhhhhhhccCCHHHhhh------------------hhhhccCcccceeeeec-cCceehhH----HHhhhh
Confidence 44555555666666666666654422 13489999999999999 58999999 577888
Q ss_pred HHHHHHHHHH
Q psy4056 194 NIDIKCMEAL 203 (227)
Q Consensus 194 ~~Dl~~l~~l 203 (227)
+.|++-|+.+
T Consensus 160 ETdIKHLRkL 169 (904)
T KOG4721|consen 160 ETDIKHLRKL 169 (904)
T ss_pred hhhHHHHHhc
Confidence 8899988764
No 248
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=66.47 E-value=11 Score=32.72 Aligned_cols=46 Identities=20% Similarity=0.375 Sum_probs=32.7
Q ss_pred ccccceeeccceEEEEec--------CCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH--------DGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~--------~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
..+++.++.|+||+|+.. ++..||+|+..+.... .+..++.+++.+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l 77 (304)
T cd05101 20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 77 (304)
T ss_pred cceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhh
Confidence 478999999999999752 4568999999875432 344555555444
No 249
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=66.25 E-value=8.2 Score=35.12 Aligned_cols=29 Identities=14% Similarity=0.282 Sum_probs=25.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.|+.|.||+|+.+ +|+.||||+...
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~ 78 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSK 78 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 56999999999999987 789999998753
No 250
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=66.03 E-value=9.5 Score=34.32 Aligned_cols=28 Identities=25% Similarity=0.317 Sum_probs=23.6
Q ss_pred cccceeeccceEEEEecC--CCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLHD--GSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~--G~~VAVKVq~ 186 (227)
+.+|.|+.|.||+|+.++ +..||||+..
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~ 65 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFE 65 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEE
Confidence 679999999999998763 4689999764
No 251
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=66.00 E-value=11 Score=33.14 Aligned_cols=25 Identities=16% Similarity=0.301 Sum_probs=21.7
Q ss_pred eeccceEEEEec-CCCEEEEEecCCC
Q psy4056 164 ASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 164 ASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++.++||+|+.+ +|+.||||+....
T Consensus 11 ~~~~~v~~a~~~~~~~~vaiK~~~~~ 36 (328)
T cd08226 11 CNLTSVYLARHTPTGTLVTVRITDLE 36 (328)
T ss_pred cCceeEEEEEEcCCCcEEEEEEeccc
Confidence 488899999976 8999999998764
No 252
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=65.96 E-value=14 Score=32.89 Aligned_cols=29 Identities=14% Similarity=0.338 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.++.|.||+++.+ +|+.||||+...
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~ 36 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNK 36 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence 46899999999999987 789999998764
No 253
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=65.77 E-value=11 Score=31.55 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=24.9
Q ss_pred cceeeccceEEEEec--C--CCEEEEEecCCCcHH
Q psy4056 161 MGAASLAQVHKATLH--D--GSTIALKVQHRNVRD 191 (227)
Q Consensus 161 iasASIaQVHrA~L~--~--G~~VAVKVq~P~i~~ 191 (227)
||.|+.|+||+|+.. + +..||+|+.++....
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~ 37 (257)
T cd05060 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA 37 (257)
T ss_pred cCccCceeEEEeEeeccCCCcceEEEEecccccch
Confidence 788999999999875 3 268999998876653
No 254
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=65.76 E-value=12 Score=31.71 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=30.3
Q ss_pred ccceeeccceEEEEec-CCC--EEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLH-DGS--TIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~--~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
.++.++.|.||+|+++ +|. .|++|....... +.+...+.++..+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l 52 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 52 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhh
Confidence 5889999999999997 554 578888775443 3444455555443
No 255
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=65.63 E-value=12 Score=32.39 Aligned_cols=36 Identities=28% Similarity=0.267 Sum_probs=27.8
Q ss_pred hhhccccCccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 150 SEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 150 ~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+.+..+ ..++.++-|.||++... +|+.||||...-
T Consensus 21 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~ 57 (292)
T cd06658 21 REYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDL 57 (292)
T ss_pred HHHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEec
Confidence 3444444 45999999999999986 789999998643
No 256
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=65.46 E-value=9.3 Score=32.68 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=26.4
Q ss_pred ccceeeccceEEEEec-----CCCEEEEEecCCCcHH
Q psy4056 160 PMGAASLAQVHKATLH-----DGSTIALKVQHRNVRD 191 (227)
Q Consensus 160 PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i~~ 191 (227)
.++.+..|+||.|+.. +|+.||+|..++....
T Consensus 11 ~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~ 47 (284)
T cd05079 11 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG 47 (284)
T ss_pred ecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH
Confidence 4899999999999853 6889999999877543
No 257
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=65.42 E-value=13 Score=32.81 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=25.4
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.+|.++.|+||+|+-+ +|+.||||+..+.
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~ 31 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKE 31 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHH
Confidence 4789999999999876 8999999998764
No 258
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=65.40 E-value=9.8 Score=31.57 Aligned_cols=29 Identities=28% Similarity=0.306 Sum_probs=25.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.++.|+||+|+.+ +|+.|++|....
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~ 35 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDL 35 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeeh
Confidence 56899999999999987 799999998653
No 259
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=65.21 E-value=9.7 Score=31.84 Aligned_cols=43 Identities=9% Similarity=0.293 Sum_probs=32.0
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH---HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR---DNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~---~~i~~Dl~~l~ 201 (227)
+.++.++.|-||+|+.++++.|++|+....-. ..+...+.+++
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~ 57 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALK 57 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHh
Confidence 45889999999999999999999999775543 33444444443
No 260
>PHA03212 serine/threonine kinase US3; Provisional
Probab=65.11 E-value=8.3 Score=35.65 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=30.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~l 203 (227)
+.++.|+.|.||+|.-+ +|+.||+|+.. .+.+...+.+++.+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---~~~~~~E~~il~~l 140 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQ---RGGTATEAHILRAI 140 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechh---hhhhHHHHHHHHhC
Confidence 45999999999999986 79999999753 23444555555443
No 261
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=65.10 E-value=15 Score=31.37 Aligned_cols=31 Identities=23% Similarity=0.189 Sum_probs=26.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
++++.++-|.||+|+.. +|+.||||+...+.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~ 38 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDI 38 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCC
Confidence 46899999999999875 89999999986654
No 262
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=64.96 E-value=12 Score=31.93 Aligned_cols=43 Identities=16% Similarity=0.316 Sum_probs=31.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR----DNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~----~~i~~Dl~~l~ 201 (227)
+.++.++.|.||+|..+ +|+.||+|+..-... ..+...+.+++
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~ 54 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILH 54 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHH
Confidence 45899999999999987 899999997764432 23444445544
No 263
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=64.68 E-value=9.8 Score=31.96 Aligned_cols=28 Identities=21% Similarity=0.471 Sum_probs=23.3
Q ss_pred cceeeccceEEEEec---CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH---DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~---~G~~VAVKVq~P~ 188 (227)
++.++.|-||+|..+ +++.||||+....
T Consensus 3 lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~ 33 (257)
T cd05116 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKND 33 (257)
T ss_pred CCCcCCcceEEeEEecCCCceEEEEEEccCC
Confidence 788899999999764 6889999997644
No 264
>KOG0575|consensus
Probab=64.62 E-value=11 Score=37.69 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=40.2
Q ss_pred cccceeeccceEEEEe-cCCCEEEEEec------CCCcHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATL-HDGSTIALKVQ------HRNVRDNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L-~~G~~VAVKVq------~P~i~~~i~~Dl~~l~~l~ 204 (227)
.-+|-|..|+||+|+- ..|+.||+||. .|+.++.+...+.+-+.+.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~ 76 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK 76 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC
Confidence 5689999999999998 68999999985 7899999999999877654
No 265
>PHA03207 serine/threonine kinase US3; Provisional
Probab=64.58 E-value=9.2 Score=35.04 Aligned_cols=43 Identities=14% Similarity=0.231 Sum_probs=31.7
Q ss_pred cccceeeccceEEEEec---CCCEEEEEecCCCcHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH---DGSTIALKVQHRNVRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~---~G~~VAVKVq~P~i~~~i~~Dl~~l~~l 203 (227)
..++.++-|+||+|+.+ ++++|+||+...+- .....+.+++.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~~l 143 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILKTI 143 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHHhc
Confidence 56999999999999875 46799999887653 334556665543
No 266
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=64.54 E-value=13 Score=32.55 Aligned_cols=45 Identities=22% Similarity=0.310 Sum_probs=34.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
..++.++.|-||+|+.. +|+.|+||+.++.. .+.+..++.+++.+
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l 56 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL 56 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc
Confidence 56999999999999987 59999999887654 34555566666544
No 267
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=64.00 E-value=13 Score=32.04 Aligned_cols=29 Identities=28% Similarity=0.216 Sum_probs=25.3
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
.+.++.++.|.||+|+.+ +|+.|++|+.+
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~ 53 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMD 53 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEe
Confidence 368999999999999975 89999999764
No 268
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=63.67 E-value=9.6 Score=33.08 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=25.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++-|.||+|+-+ +|+.|++|.....
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~ 56 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQ 56 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecC
Confidence 45999999999999865 8999999977643
No 269
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=63.56 E-value=11 Score=31.97 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=26.9
Q ss_pred cccceeeccceEEEEecC-C-----CEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLHD-G-----STIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-G-----~~VAVKVq~P~i~~~ 192 (227)
+.++.++.|.||+|...+ + +.|++|+.+......
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~ 50 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK 50 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH
Confidence 569999999999999862 2 589999998765433
No 270
>KOG0032|consensus
Probab=63.37 E-value=11 Score=35.33 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=35.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcH------HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVR------DNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~------~~i~~Dl~~l~~l~ 204 (227)
+-+|.+..|+||+++-+ +|+++|+|+...... +.+...+.+|+.+.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~ 93 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLS 93 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhcc
Confidence 56999999999999998 599999999865544 35555555555543
No 271
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=63.25 E-value=11 Score=32.02 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=23.6
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++.++.|.||+|..+ +|+.|++|+.+..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~ 29 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKK 29 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehh
Confidence 467889999999876 7999999988754
No 272
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=63.16 E-value=13 Score=32.25 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=24.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.++.++.|.||+|+-. +|+.|+||...
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~ 53 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQIN 53 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEe
Confidence 46999999999999865 89999999654
No 273
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=63.13 E-value=11 Score=31.29 Aligned_cols=41 Identities=22% Similarity=0.226 Sum_probs=28.6
Q ss_pred ccceeeccceEEEEecCCC-----------EEEEEecCCCcH--HHHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLHDGS-----------TIALKVQHRNVR--DNANIDIKCM 200 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~-----------~VAVKVq~P~i~--~~i~~Dl~~l 200 (227)
.++.++-|+||+|+.++.. .|++|+..++-. ..+...+.++
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l 55 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLM 55 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHH
Confidence 4788999999999998433 688998776653 3444444444
No 274
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=62.84 E-value=21 Score=33.85 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCC-CEEEEEecCCCcH
Q psy4056 131 MSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDG-STIALKVQHRNVR 190 (227)
Q Consensus 131 ~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G-~~VAVKVq~P~i~ 190 (227)
++.-+.+...+.+..|.- +--+..+-++++.|-+.+||+.+..+| +.|+||...|.++
T Consensus 6 ~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r 64 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVR 64 (401)
T ss_pred eCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccc
Confidence 455566666665554421 111344567999999999999999888 5999998776654
No 275
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=62.69 E-value=11 Score=31.64 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=24.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+-++.++.|.||+|..+ +|+.|+||+.+.
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~ 37 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQF 37 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeec
Confidence 45888999999999987 699999998653
No 276
>KOG3653|consensus
Probab=62.52 E-value=6.4 Score=38.43 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=35.2
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCME 201 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~ 201 (227)
+-+|.|=.|-|++|.| +++.|||||-.+.-.+++...=.+++
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYS 257 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHh
Confidence 3489999999999999 67999999988888888777766654
No 277
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=62.37 E-value=20 Score=31.16 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=26.9
Q ss_pred cccceeeccceEEEEec-CCC----EEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGS----TIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~----~VAVKVq~P~i~~ 191 (227)
+.+|+++.|+||+|+.. +|+ .||+|+..+....
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~ 50 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP 50 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH
Confidence 57999999999999876 565 5799988876544
No 278
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=62.27 E-value=9.5 Score=40.11 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=27.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.+|.++.|.||+|+-. +|+.||||+.+.+.
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l 39 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDL 39 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECccc
Confidence 56899999999999976 79999999987654
No 279
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=62.21 E-value=14 Score=31.34 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=25.8
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.|+.++.|.||+|+.. +|+.|+||......
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~ 36 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKF 36 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhc
Confidence 45899999999999997 68899999765543
No 280
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=62.07 E-value=15 Score=31.99 Aligned_cols=46 Identities=17% Similarity=0.321 Sum_probs=32.8
Q ss_pred ccccceeeccceEEEEec--------CCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH--------DGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~--------~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
.+++|.++.|.||+|+.. +++.||+|+.++.... .+..++.+++.+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l 80 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMI 80 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHh
Confidence 357999999999999863 3467999999987532 344455555544
No 281
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=62.03 E-value=13 Score=31.44 Aligned_cols=30 Identities=10% Similarity=0.183 Sum_probs=24.3
Q ss_pred ccceeeccceEEEEecC---CCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLHD---GSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~~---G~~VAVKVq~P~i 189 (227)
.++.++.|.||+|+..+ +..|++|..+...
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~ 34 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA 34 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCC
Confidence 47899999999999864 3579999877654
No 282
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=61.92 E-value=16 Score=30.27 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=24.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
++++.++.|+|++++.+ +|++||||...
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~ 34 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLN 34 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEe
Confidence 46889999999999987 78999999864
No 283
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=61.76 E-value=16 Score=31.07 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=26.1
Q ss_pred cccceeeccceEEEEec-CCC----EEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DGS----TIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~----~VAVKVq~P~i~ 190 (227)
+.++.++-|+||+|+.+ +|+ .||+|+..++..
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~ 49 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS 49 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC
Confidence 57999999999999987 454 699998876643
No 284
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=61.46 E-value=17 Score=31.06 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=26.2
Q ss_pred cccceeeccceEEEEecC-----------------CCEEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLHD-----------------GSTIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-----------------G~~VAVKVq~P~i~~ 191 (227)
+.+|.++.|.||+|+..+ +..||+|+..++...
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~ 60 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD 60 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH
Confidence 568999999999998762 256999999887643
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=61.30 E-value=28 Score=30.20 Aligned_cols=29 Identities=24% Similarity=0.289 Sum_probs=25.4
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.++.++.|+|++|+.+ +|+.||||+....
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~ 57 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLR 57 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEec
Confidence 5999999999999986 8999999997543
No 286
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=60.84 E-value=13 Score=31.06 Aligned_cols=28 Identities=18% Similarity=0.296 Sum_probs=24.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.++.++.|.||.++.+ +|+.|++|...
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~ 34 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEIN 34 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEE
Confidence 56899999999999987 78999999753
No 287
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=60.83 E-value=15 Score=31.93 Aligned_cols=45 Identities=22% Similarity=0.336 Sum_probs=29.2
Q ss_pred cccceeeccceEEEEec-CCCE--EEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGST--IALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~--VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
+.+|.++.|+||+|+.+ +|.. |++|.......+ .+...+.++..+
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l 64 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 64 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHh
Confidence 67999999999999986 6764 566655544332 334444444443
No 288
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=60.38 E-value=16 Score=31.57 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=24.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.+++++.|-||+|.-. +|+.|++|+..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~ 53 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMN 53 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEec
Confidence 57999999999999865 78999999854
No 289
>PRK05231 homoserine kinase; Provisional
Probab=60.18 E-value=43 Score=29.60 Aligned_cols=49 Identities=10% Similarity=0.009 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHhcCC-ChhhhccccCccccceeeccceEEEEecCCCEEEEEecC
Q psy4056 130 PMSPMKDILAVLKEDLGK-DPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQH 186 (227)
Q Consensus 130 p~~~~~~v~~~l~~elG~-~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~ 186 (227)
.+.+.+++.+++ +.+|. .+. +-+|+++|+..++|+-...+| ..++|+-+
T Consensus 5 t~ls~~~l~~~l-~~y~~~~~~------~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDLGELL------SLKGIAEGIENSNFFLTTTQG-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCCchhh------ccchhccccccceEEEEeCCC-cEEEEEec
Confidence 456778888888 66775 222 236899999999999987666 68999865
No 290
>KOG0658|consensus
Probab=60.05 E-value=9.3 Score=35.90 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=34.6
Q ss_pred CccccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHH
Q psy4056 157 EPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCME 201 (227)
Q Consensus 157 d~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~ 201 (227)
+.+-+|+||.|=||+|.+. ++++||||=..|+=+ .-...+.+|+
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~ 72 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMR 72 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHH
Confidence 4567999999999999998 789999997666644 3455667766
No 291
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=60.03 E-value=12 Score=34.11 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.+|.|+.|.||+|+.+ +|+.||+|+...
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~ 78 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 78 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEH
Confidence 56999999999999988 789999999753
No 292
>KOG0587|consensus
Probab=59.62 E-value=9.6 Score=39.73 Aligned_cols=54 Identities=22% Similarity=0.428 Sum_probs=38.8
Q ss_pred CChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCcHH--HHHHHHHHHHH
Q psy4056 147 KDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRD--NANIDIKCMEA 202 (227)
Q Consensus 147 ~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~--~i~~Dl~~l~~ 202 (227)
.++.+.|+-++ -++-|--|+|++++=+ +|+-+||||++|+.+. .++....+++.
T Consensus 15 pdp~d~~ei~e--vig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~ 71 (953)
T KOG0587|consen 15 PDPADIFEIIE--VIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKK 71 (953)
T ss_pred CCCCCccEEEE--EEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHh
Confidence 34556664333 3888888999999876 9999999999998764 45555555544
No 293
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=59.53 E-value=24 Score=30.64 Aligned_cols=30 Identities=10% Similarity=0.114 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+|+.+ +|+.|+||+..++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~ 37 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQ 37 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehh
Confidence 56899999999999987 7899999987765
No 294
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=59.46 E-value=19 Score=31.08 Aligned_cols=46 Identities=20% Similarity=0.325 Sum_probs=31.1
Q ss_pred ccccceeeccceEEEEec-CCC--EEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGS--TIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~--~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
.+.++.++.|+||+|+++ +|. .|++|+.+.... +.+..++.++..+
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l 59 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKL 59 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhh
Confidence 357999999999999997 454 578887774433 2344455555443
No 295
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=59.45 E-value=18 Score=31.34 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.+++++.|.||+|+-+ +|+.||+|.....
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~ 55 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQ 55 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecC
Confidence 56999999999999975 8999999987653
No 296
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=58.48 E-value=24 Score=30.06 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=27.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~ 192 (227)
..++.++.|+||+|..+ +|..|++|.....-.+.
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~ 45 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE 45 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH
Confidence 45999999999999987 68899999887655443
No 297
>KOG0196|consensus
Probab=58.42 E-value=8.2 Score=40.05 Aligned_cols=73 Identities=18% Similarity=0.257 Sum_probs=49.0
Q ss_pred HhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEec-CC---CEEEEEecCCCcHHHHHHHHHH
Q psy4056 125 LHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DG---STIALKVQHRNVRDNANIDIKC 199 (227)
Q Consensus 125 Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G---~~VAVKVq~P~i~~~i~~Dl~~ 199 (227)
...-+.|+.+++--+.++ ||-++++--+..+| +-||++..|-|++|+|+ .| ..||||-.+-|-.+.-+.|.-.
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~ 679 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLS 679 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhh
Confidence 444455665555444322 22233333333444 45999999999999999 55 4899999999999988888644
No 298
>KOG1094|consensus
Probab=58.41 E-value=12 Score=37.88 Aligned_cols=39 Identities=21% Similarity=0.381 Sum_probs=33.8
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDI 197 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl 197 (227)
+-||++-.|-||...+.++..||||..||+..+.-+.|+
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F 582 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDF 582 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHH
Confidence 459999999999999977799999999999887765554
No 299
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=58.07 E-value=19 Score=30.06 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=31.0
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcH-HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVR-DNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~-~~i~~Dl~~l~~ 202 (227)
+-++.++.|+||+|.. .|+.|++|....+-. +.+..++.+++.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~~~~~~e~~~l~~ 55 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFLAEASVMTQ 55 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchHHHHHHHHHHHHh
Confidence 4589999999999987 589999998765432 334455555443
No 300
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=57.94 E-value=23 Score=30.40 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=25.0
Q ss_pred cccceeeccceEEEEecC------CCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLHD------GSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~------G~~VAVKVq~P~i 189 (227)
+.++.++.|.||+|+.++ +..||||+.....
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~ 48 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 48 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC
Confidence 569999999999998652 5589999876554
No 301
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=57.90 E-value=13 Score=31.36 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=26.3
Q ss_pred ccccceeeccceEEEEecCC----CEEEEEecCCCcH
Q psy4056 158 PNPMGAASLAQVHKATLHDG----STIALKVQHRNVR 190 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G----~~VAVKVq~P~i~ 190 (227)
.+.++.++-|+||+|+..++ ..|+||+-+....
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~ 47 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS 47 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC
Confidence 35789999999999998743 4799998876653
No 302
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=57.34 E-value=13 Score=31.79 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=23.4
Q ss_pred cceeeccceEEEEecC-------------------------CCEEEEEecCCCcH
Q psy4056 161 MGAASLAQVHKATLHD-------------------------GSTIALKVQHRNVR 190 (227)
Q Consensus 161 iasASIaQVHrA~L~~-------------------------G~~VAVKVq~P~i~ 190 (227)
||.|+.|.||+|++.. ...|+||+..+.-.
T Consensus 3 lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~ 57 (274)
T cd05076 3 LGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR 57 (274)
T ss_pred cCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH
Confidence 7899999999999741 13699999887644
No 303
>KOG0597|consensus
Probab=57.33 E-value=11 Score=37.99 Aligned_cols=50 Identities=18% Similarity=0.272 Sum_probs=35.4
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHh
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWV 210 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~ 210 (227)
+-||-||.|-||+|+-| +++-||+|+.-..=+ -+.|+++++.-++++..+
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~l~~l~~ev~i~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKELKNLRQEVRILRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHHHHHHHHHHHHHHhc
Confidence 35899999999999998 889999998654322 344555555555555443
No 304
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=57.21 E-value=17 Score=32.48 Aligned_cols=30 Identities=23% Similarity=0.454 Sum_probs=24.6
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~ 188 (227)
+++|.++.|.||+|+.. +|+.||||+.+..
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~ 48 (337)
T cd05054 13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG 48 (337)
T ss_pred cccccCcCceEEeccccccccccccceeeeeeccCC
Confidence 67999999999999764 3578999987643
No 305
>PHA03211 serine/threonine kinase US3; Provisional
Probab=57.04 E-value=14 Score=35.44 Aligned_cols=42 Identities=7% Similarity=0.057 Sum_probs=30.2
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEA 202 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~ 202 (227)
...++.++.|.||+|+.. +|+.||||.... ..+..++.+++.
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~ 216 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRR 216 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHH
Confidence 356999999999999987 689999996432 233445555543
No 306
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=56.99 E-value=11 Score=33.56 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=24.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.+|.++.|.||+++.+ +++.||+|+..
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~ 35 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILN 35 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEe
Confidence 56999999999999988 67899999975
No 307
>KOG0581|consensus
Probab=56.53 E-value=16 Score=34.45 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=39.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEec----CCCcHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQ----HRNVRDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq----~P~i~~~i~~Dl~~l~~l 203 (227)
.-+|+|+=|-|+++..+ +|+-.|.|+. .|.+.+++...|.+++..
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC
Confidence 45999999999999998 8999999999 777788888888887653
No 308
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=56.43 E-value=17 Score=30.22 Aligned_cols=28 Identities=14% Similarity=0.134 Sum_probs=24.6
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.++.++.|+|+.+.-+ +|+.||+|+.+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~ 34 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIR 34 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEE
Confidence 56899999999999987 79999999864
No 309
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=56.40 E-value=12 Score=31.65 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=26.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+.++.++.|+||+|+.+ +|+.||||+.+...
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~ 36 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF 36 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhcc
Confidence 35889999999999987 79999999877654
No 310
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=56.09 E-value=22 Score=32.45 Aligned_cols=46 Identities=20% Similarity=0.310 Sum_probs=32.1
Q ss_pred ccccceeeccceEEEEec------CCCEEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH------DGSTIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
.+.+|.++.|.||+|+.. +++.||||+.+.... +.+...+.+++.+
T Consensus 43 ~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l 98 (374)
T cd05106 43 GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHL 98 (374)
T ss_pred hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhh
Confidence 367999999999999853 346899999876542 3344555555544
No 311
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=55.92 E-value=24 Score=28.92 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.+..|.||++... +|++|++|+....
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~ 36 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS 36 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecc
Confidence 56899999999999987 7999999997654
No 312
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=55.76 E-value=19 Score=29.67 Aligned_cols=30 Identities=27% Similarity=0.227 Sum_probs=25.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+++-+ +|+.+++|+....
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~ 36 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLG 36 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehh
Confidence 45888999999999866 8899999987654
No 313
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=55.52 E-value=26 Score=29.75 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=27.2
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcHHHH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVRDNA 193 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~~~i 193 (227)
+.++.++.|-||+|+.. +++.||||+.+.......
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~ 51 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPL 51 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHH
Confidence 35788999999999875 357899999986655443
No 314
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=55.21 E-value=16 Score=31.98 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.5
Q ss_pred cccceeeccceEEEEec----CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH----DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~----~G~~VAVKVq~P~ 188 (227)
+.++.++.|.||+++-. +|+.||||+.+..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~ 35 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKA 35 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHH
Confidence 35899999999998753 6899999988653
No 315
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=55.19 E-value=29 Score=29.46 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=26.5
Q ss_pred cccceeeccceEEEEecC------CCEEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLHD------GSTIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~------G~~VAVKVq~P~i~~ 191 (227)
++++.++.|+||+|..++ +..|++|........
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~ 50 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE 50 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH
Confidence 579999999999999974 568999987665543
No 316
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=55.16 E-value=14 Score=31.90 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEecC-------------CC--EEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLHD-------------GS--TIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-------------G~--~VAVKVq~P~i~~~ 192 (227)
+.++.++.|.||+++..+ |+ .||||+.+++....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~ 59 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKT 59 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHH
Confidence 459999999999998642 22 59999999876543
No 317
>PF08667 BetR: BetR domain; InterPro: IPR013975 CheY-like phosphoacceptor (or receiver [REC]) domain is a common module in a variety of response regulators of the bacterial signal transduction systems. BetR is one of the many response regulators and is encoded mainly in Burkholderia spp. It is a N-terminal helix-turn-helix domain (HTH) and has been shown to be related to the XRE-type HTH domain (IPR001387 from INTERPRO), it has been suggested that BetR would have dimerization, protein-protein interaction, and activation/relief-of-inhibition properties [].
Probab=54.77 E-value=26 Score=28.89 Aligned_cols=90 Identities=18% Similarity=0.249 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccc
Q psy4056 83 KEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMG 162 (227)
Q Consensus 83 ~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~Pia 162 (227)
...+++++++|...|-.=-|-.+.++ ++|.-.+...-++|. .--|.+.+++.++ .+.||.+++++|..-+.+-..
T Consensus 4 ~~~~erV~~Ll~~~Gi~kr~~~s~LA---~iL~Is~ssa~RKL~-G~~~ftl~EI~~I-a~~fgvS~d~l~g~~~~~~~~ 78 (147)
T PF08667_consen 4 QAIAERVRELLDRKGIPKRKHASELA---DILGISYSSAYRKLN-GKSPFTLEEIKKI-AKHFGVSPDELFGHSDNSGQN 78 (147)
T ss_pred HHHHHHHHHHHHHcCCcchhhHHHHH---HHHCCCHHHHHHHhc-CCCCCCHHHHHHH-HHHhCcCHHHHHhhhhcccCC
Confidence 34688999999998866656556565 455556666666765 4455568888776 678999999999433332111
Q ss_pred eeeccceEEEEecCC
Q psy4056 163 AASLAQVHKATLHDG 177 (227)
Q Consensus 163 sASIaQVHrA~L~~G 177 (227)
.+.-+-+|.|++..|
T Consensus 79 p~~~~~~~~ai~~~g 93 (147)
T PF08667_consen 79 PAAQNEMQDAIFYIG 93 (147)
T ss_pred cchhhHHHhhhhhcc
Confidence 134455667777643
No 318
>KOG0577|consensus
Probab=54.59 E-value=7.5 Score=39.38 Aligned_cols=72 Identities=17% Similarity=0.288 Sum_probs=45.2
Q ss_pred HHHHHHHHhcCCChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHh-CCC
Q psy4056 136 DILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWV-FPE 213 (227)
Q Consensus 136 ~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~-~p~ 213 (227)
+|..+|-+ .+++.+|.++.+ ||-||.|-||-|+-. +.+.||||=.--.=++..+.=-.|++- ++++..+ .|+
T Consensus 14 eiA~LF~k---~DPEklf~dLrE--IGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKE-VrFL~~l~HPn 87 (948)
T KOG0577|consen 14 EIADLFFK---DDPEKLFSDLRE--IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKE-VRFLRQLRHPN 87 (948)
T ss_pred hHHHHHcc---CCHHHHHHHHHH--hcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHH-HHHHHhccCCC
Confidence 44444443 478888876654 999999999999986 788999986544333333322233433 3444444 454
No 319
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=54.55 E-value=15 Score=37.88 Aligned_cols=30 Identities=13% Similarity=0.108 Sum_probs=26.1
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
.+.++.+.-|.||+|+.+ +|+.||||....
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~ 725 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEIND 725 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccC
Confidence 457999999999999985 899999998754
No 320
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=54.14 E-value=19 Score=31.09 Aligned_cols=44 Identities=18% Similarity=0.309 Sum_probs=30.4
Q ss_pred cccceeeccceEEEEec-----------------CCCEEEEEecCCCcHH----HHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-----------------DGSTIALKVQHRNVRD----NANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-----------------~G~~VAVKVq~P~i~~----~i~~Dl~~l~~ 202 (227)
+.++.++.|.||++..+ ++..||||+.+..... .+..++.+++.
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~ 75 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSR 75 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh
Confidence 46999999999998643 3457999999876543 34444454443
No 321
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=54.04 E-value=30 Score=30.16 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=28.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~ 192 (227)
+.++.++.|.||+|... +|+.||+|+.+.+....
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~ 41 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA 41 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH
Confidence 45899999999999977 78999999988765443
No 322
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=53.68 E-value=19 Score=32.80 Aligned_cols=28 Identities=14% Similarity=0.260 Sum_probs=24.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.+|.++.|.||+|+.+ +|+.||+|+..
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~ 77 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLS 77 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEE
Confidence 46999999999999987 68999999874
No 323
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=52.55 E-value=25 Score=29.02 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=31.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC-c----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN-V----RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~-i----~~~i~~Dl~~l~~ 202 (227)
+.++.+..|.||+|... ++++||||+.... . .+.+...+.+++.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~ 55 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL 55 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh
Confidence 56899999999999986 7899999986543 1 2334444454443
No 324
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=51.82 E-value=25 Score=30.01 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=24.9
Q ss_pred cccceeeccceEEEEec-CCC----EEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGS----TIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~----~VAVKVq~P~i 189 (227)
+.+|.++-|.||+|+.. +|+ +|++|......
T Consensus 13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~ 48 (279)
T cd05111 13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS 48 (279)
T ss_pred cccCccCCcceEEEEEcCCCCceeeEEEEeeccccc
Confidence 57999999999999986 565 58888876543
No 325
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=51.73 E-value=33 Score=28.78 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=24.6
Q ss_pred cccceeeccceEEEEecC-CC--EEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLHD-GS--TIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-G~--~VAVKVq~P~i 189 (227)
+-++.++.|.||+|+..+ |+ .||||......
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~ 38 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI 38 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCc
Confidence 358999999999999874 43 69999876654
No 326
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=51.69 E-value=36 Score=28.64 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=26.3
Q ss_pred cccceeeccceEEEEec-CCC---EEEEEecCCCcHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGS---TIALKVQHRNVRD 191 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~---~VAVKVq~P~i~~ 191 (227)
+-++.++.|-||+|+.+ +|+ .||||+...+...
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~ 46 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTE 46 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCH
Confidence 45899999999999987 443 6999998876543
No 327
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.55 E-value=1e+02 Score=25.10 Aligned_cols=42 Identities=33% Similarity=0.341 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHcC-CCCCcHH
Q psy4056 72 EEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGAL-EYLLPKE 117 (227)
Q Consensus 72 ~~~~~~~~~~h~~~a~~l~~~~~~lGg~~iKlGQ~lstr-~dllP~~ 117 (227)
++|.+....--.+.|+ ++..++--|-|+=|++|+. .+++|+.
T Consensus 51 d~~rqel~~HFa~sAe----Llktl~~dYqklyqHmA~ss~~Llpel 93 (138)
T COG3105 51 DEYRQELVKHFARSAE----LLKTLAQDYQKLYQHMAKSSTSLLPEL 93 (138)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhHhhhCccc
Confidence 4444444443333443 4555678899999999965 5688864
No 328
>PRK06148 hypothetical protein; Provisional
Probab=51.54 E-value=46 Score=35.28 Aligned_cols=57 Identities=25% Similarity=0.334 Sum_probs=46.8
Q ss_pred HhcCCCCCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCc
Q psy4056 125 LHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNV 189 (227)
Q Consensus 125 Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i 189 (227)
+....|..+.+++++++++.+|..- +-+|+++ .--++|+.+..+|+..++||-+|+-
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~~ 60 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDDGADYILKIVNPSE 60 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCCCCeEEEEEcCCcc
Confidence 4556788999999999999999742 1257765 5689999998899999999999973
No 329
>KOG4250|consensus
Probab=51.45 E-value=9.5 Score=38.81 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=37.3
Q ss_pred ccCccccceeeccceEEEEec-CCCEEEEEecCC----CcHHHHHHHHHHHHHHH
Q psy4056 155 SIEPNPMGAASLAQVHKATLH-DGSTIALKVQHR----NVRDNANIDIKCMEALV 204 (227)
Q Consensus 155 ~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P----~i~~~i~~Dl~~l~~l~ 204 (227)
....+-+|-|--|+|++|+-+ .|+.||||+-++ --.+.....+.+|+.+-
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn 69 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN 69 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC
Confidence 334567999999999999955 999999999877 33445556666666543
No 330
>PF12844 HTH_19: Helix-turn-helix domain; PDB: 3LIS_B 3LFP_A 2XIU_B 2GZU_B 2XJ3_A 1UTX_A 2XI8_B 3F6W_C 3EUS_B.
Probab=51.40 E-value=62 Score=21.55 Aligned_cols=63 Identities=19% Similarity=0.239 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccC
Q psy4056 86 AEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIE 157 (227)
Q Consensus 86 a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd 157 (227)
+++|++..++.|=+.-.+++.+... ...++.....-...+ ......+.+.||.+++++|...|
T Consensus 1 G~~lk~~r~~~~lt~~~~a~~~~i~--------~~~i~~~e~g~~~~~-~~~l~~i~~~~~v~~~~l~~~~~ 63 (64)
T PF12844_consen 1 GERLKELREEKGLTQKDLAEKLGIS--------RSTISKIENGKRKPS-VSTLKKIAEALGVSLDELFDGED 63 (64)
T ss_dssp HHHHHHHHHHCT--HHHHHHHHTS---------HHHHHHHHTTSS--B-HHHHHHHHHHHTS-HHHHCCCHH
T ss_pred CHHHHHHHHHcCCCHHHHHHHHCcC--------HHHHHHHHCCCcCCC-HHHHHHHHHHhCCCHHHHhccCC
Confidence 4577888888888888888876643 345555555544333 44456678999999999886543
No 331
>KOG0197|consensus
Probab=51.39 E-value=16 Score=35.59 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=32.4
Q ss_pred cceeeccceEEEEecCCCEEEEEecCCCcH--HHHHHHHHHHHHH
Q psy4056 161 MGAASLAQVHKATLHDGSTIALKVQHRNVR--DNANIDIKCMEAL 203 (227)
Q Consensus 161 iasASIaQVHrA~L~~G~~VAVKVq~P~i~--~~i~~Dl~~l~~l 203 (227)
||+|-.|-||.|++.+..+||||.+.|+-- +.+.....+|+.+
T Consensus 214 LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L 258 (468)
T KOG0197|consen 214 LGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKL 258 (468)
T ss_pred hcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhC
Confidence 788899999999996556999999999722 3444555565543
No 332
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=51.24 E-value=30 Score=29.15 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-CC---CEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH-DG---STIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G---~~VAVKVq~P~i~ 190 (227)
+-++.+..|+||+|+.+ +| ..||+|..+++..
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~ 45 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT 45 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCC
Confidence 56899999999999986 33 3799999887653
No 333
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=51.19 E-value=38 Score=28.79 Aligned_cols=31 Identities=16% Similarity=0.286 Sum_probs=25.6
Q ss_pred cccceeeccceEEEEec-----CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-----DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-----~G~~VAVKVq~P~i 189 (227)
+.++.++.|+||+|+.. +++.|++|...+.-
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~ 46 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN 46 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCC
Confidence 56899999999999863 56899999887644
No 334
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=51.18 E-value=14 Score=31.08 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=24.5
Q ss_pred ccceeeccceEEEEecC-------CCEEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLHD-------GSTIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~~-------G~~VAVKVq~P~i 189 (227)
.++.++.|.||+|+.++ ++.|+||....+.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~ 38 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA 38 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc
Confidence 58999999999999863 3689999877665
No 335
>KOG0593|consensus
Probab=51.07 E-value=20 Score=33.51 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=34.1
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecC-----CCcHHHHHHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQH-----RNVRDNANIDIKCMEA 202 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~-----P~i~~~i~~Dl~~l~~ 202 (227)
-+|.||-|-|++.+-+ +|+-||||.=. |.|.+.--.+++.|+.
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKq 57 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQ 57 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHh
Confidence 3899999999999998 79999999754 5566666666666654
No 336
>KOG3622|consensus
Probab=50.97 E-value=2.2e+02 Score=30.99 Aligned_cols=120 Identities=15% Similarity=0.088 Sum_probs=70.0
Q ss_pred hhhhhhhheeEeec-cCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-Hh
Q psy4056 18 GSVIGGTGILLHRN-NYDVNSLVAVRLVRAASCVFNIAYIYKKALYQKATPDPTSEEYSNLKSKVHKEAAEQLLELC-KM 95 (227)
Q Consensus 18 ~~~~~g~~~~~~~~-~~~~~~~~~~R~~R~~~~~~~i~~~y~~~l~~~~~~~~~~~~~~~~~~~~h~~~a~~l~~~~-~~ 95 (227)
.+=++|.|+..|.+ +|++. ..|+++.+..-.....||+..++..++ ..++++++...-++.+-.-..+--.+ .+
T Consensus 569 Lvk~l~~GL~Tyn~~rYkqf---~KriG~~~rhTl~yv~d~w~l~~~~nL-a~~~e~~eklQvE~d~l~lrA~~y~~~~~ 644 (1572)
T KOG3622|consen 569 LVKILDNGLTTYNQPRYKQF---CKRIGISLRHTLRYVCDNWRLIRDQNL-ARPGEEHEKLQVEVDRLVLRALNYLIHQD 644 (1572)
T ss_pred HHHHHHhhhhhcccHHHHHH---HHHHHHHHHHHHHHHhhhHHHHHhccc-cCChHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34556778887722 33333 579999998889999999999888777 56666665444443221111111111 12
Q ss_pred cChHHHHHHHHHHcCC-CCCcHHHHHHHH-HHhcCCCCCCHHHHHHHHHHhc
Q psy4056 96 NKGVYIKVGQHIGALE-YLLPKEYVETMK-VLHSKAPMSPMKDILAVLKEDL 145 (227)
Q Consensus 96 lGg~~iKlGQ~lstr~-dllP~~~~~~L~-~Lqd~~p~~~~~~v~~~l~~el 145 (227)
.=|+ =|++|+.+ +.+..|.+-.|- .|+...|.++-.++-..-+.++
T Consensus 645 ~LG~----wqf~sslPfgtls~e~~w~lfY~l~~~l~~~s~~~~~~~~~~~~ 692 (1572)
T KOG3622|consen 645 TLGL----WQFVSSLPFGTLSEECRWRLFYALRSNLKKMSIHEIYDTPICEV 692 (1572)
T ss_pred chhh----hhhhhcCCcccccHHHHHHHHHHHHccchhhhhhhcccchHHHh
Confidence 2233 38999987 457787665543 4444556666555444434333
No 337
>KOG0660|consensus
Probab=50.42 E-value=18 Score=33.96 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=25.7
Q ss_pred ccccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 158 PNPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
.+|+|.|+-|.|-.|+-+ +|+.||||=..
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~ 56 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL 56 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh
Confidence 589999999999999988 89999999433
No 338
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=50.12 E-value=33 Score=30.20 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=31.6
Q ss_pred cccceeeccceEEEEec-C--CCEEEEEecCCCc-----HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-D--GSTIALKVQHRNV-----RDNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~--G~~VAVKVq~P~i-----~~~i~~Dl~~l~~l 203 (227)
+.++.++-|.||+++.. + |+.||||+..... .+.+..++.+++.+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l 58 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHF 58 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHh
Confidence 45889999999999987 4 7899999876432 23344455555443
No 339
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=49.43 E-value=34 Score=29.14 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEecC------CCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLHD------GSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~------G~~VAVKVq~P~i~ 190 (227)
+++|.++-|.||+|..++ +..||+|+.+.+..
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~ 55 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT 55 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC
Confidence 579999999999999862 36899999887644
No 340
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=49.23 E-value=29 Score=30.56 Aligned_cols=29 Identities=24% Similarity=0.247 Sum_probs=25.2
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.+..|.||+|..+ +|+.||||..+.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~ 42 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFD 42 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeecc
Confidence 56899999999999987 789999997754
No 341
>PRK11768 serine/threonine protein kinase; Provisional
Probab=48.08 E-value=1.1e+02 Score=27.67 Aligned_cols=70 Identities=13% Similarity=0.011 Sum_probs=47.0
Q ss_pred CCCCCHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCC--cHHHHHHHHHHHHHHHH
Q psy4056 129 APMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRN--VRDNANIDIKCMEALVH 205 (227)
Q Consensus 129 ~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~--i~~~i~~Dl~~l~~l~~ 205 (227)
.+..+++.+...++.- |...+.-. .+++ ..-.+||+-...+|+.+++||-+|+ -...+...+..+..+..
T Consensus 8 ~~~l~p~~~~~a~~~~-g~~~~~~~-----~~l~-s~eN~vy~v~~~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~ 79 (325)
T PRK11768 8 FQTLTPDLILDALESL-GLRVDGRL-----LALN-SYENRVYQFGDEDGRRVVAKFYRPERWSDAQILEEHAFALELAE 79 (325)
T ss_pred CCCCChHHHHHHHHHc-CCCCccce-----Eeec-cccceEEEEecCCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHH
Confidence 4455667777777655 65432211 1222 2567899999888999999999987 46667777777766654
No 342
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=47.70 E-value=41 Score=28.03 Aligned_cols=28 Identities=29% Similarity=0.299 Sum_probs=22.5
Q ss_pred ccceeeccceEEEEecC----CCEEEEEecCC
Q psy4056 160 PMGAASLAQVHKATLHD----GSTIALKVQHR 187 (227)
Q Consensus 160 PiasASIaQVHrA~L~~----G~~VAVKVq~P 187 (227)
.++.++.|+||+|+..+ +..||+|....
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~ 33 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR 33 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCc
Confidence 47899999999999752 35899998654
No 343
>PF13443 HTH_26: Cro/C1-type HTH DNA-binding domain; PDB: 3TYR_A 3TYS_A 3B7H_A.
Probab=47.66 E-value=45 Score=22.18 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=31.5
Q ss_pred HHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccc
Q psy4056 89 LLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFAS 155 (227)
Q Consensus 89 l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~ 155 (227)
|...+.+.|-..-++++-.. +++. .++++...-+..+.-+.-..|.+.||.+++++|..
T Consensus 2 L~~~m~~~~it~~~La~~~g-----is~~---tl~~~~~~~~~~~~~~~l~~ia~~l~~~~~el~~~ 60 (63)
T PF13443_consen 2 LKELMAERGITQKDLARKTG-----ISRS---TLSRILNGKPSNPSLDTLEKIAKALNCSPEELFEY 60 (63)
T ss_dssp HHHHHHHTT--HHHHHHHHT-------HH---HHHHHHTTT-----HHHHHHHHHHHT--HHHCTEC
T ss_pred HHHHHHHcCCCHHHHHHHHC-----cCHH---HHHHHHhcccccccHHHHHHHHHHcCCCHHHHhhc
Confidence 55666777777777776554 3332 44555554433344455566799999999999853
No 344
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=47.62 E-value=30 Score=30.09 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=32.2
Q ss_pred ccccceeeccceEEEEec------CCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH------DGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
.+.++.++.|+||+|+.. ++..||||+.+..... .+...+.+++.+
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 95 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL 95 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhc
Confidence 457999999999999853 4568999988766543 344455555443
No 345
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=45.75 E-value=36 Score=28.67 Aligned_cols=45 Identities=11% Similarity=0.242 Sum_probs=31.7
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcH----HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVR----DNANIDIKCMEAL 203 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~----~~i~~Dl~~l~~l 203 (227)
.-++.++.|.||+|+.+ +.+.|++|+-...-. +.+..++.+++.+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l 65 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc
Confidence 34899999999999976 346899998865433 3455555655543
No 346
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.70 E-value=74 Score=28.87 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHH
Q psy4056 134 MKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHV 206 (227)
Q Consensus 134 ~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~ 206 (227)
|..|-+.+.+.+|.. ++ -+.+++..+.|-|.++-.. +..++-||++.-.-...+.+...-|+.+++-
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~~~f~AEa~gL~~la~s 68 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQLSMFTAEADGLELLARS 68 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhHHHHHHHHHHHHHHHhc
Confidence 678889999999987 32 2457788888888776553 5569999999999999999999999988865
No 347
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=45.67 E-value=32 Score=29.10 Aligned_cols=34 Identities=9% Similarity=0.197 Sum_probs=28.0
Q ss_pred cccceeeccceEEEEecC-----CCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLHD-----GSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~-----G~~VAVKVq~P~i~~~ 192 (227)
+-++.+..|.||+|...+ +..|++|+...+....
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~ 50 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEI 50 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHH
Confidence 458999999999999986 7899999987665433
No 348
>KOG0201|consensus
Probab=44.63 E-value=23 Score=34.32 Aligned_cols=53 Identities=19% Similarity=0.362 Sum_probs=38.3
Q ss_pred CChhhhccccCccccceeeccceEEEEec-CCCEEEEEecCCCcHHH----HHHHHHHHH
Q psy4056 147 KDPSEIFASIEPNPMGAASLAQVHKATLH-DGSTIALKVQHRNVRDN----ANIDIKCME 201 (227)
Q Consensus 147 ~~~~~~F~~fd~~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~----i~~Dl~~l~ 201 (227)
.++...|..+ +-|+-+|.|-||+|.-. .++.||+||..=+-.+- +..|+..+.
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls 66 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLS 66 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHH
Confidence 3556677776 45999999999999975 78999999987544333 444555443
No 349
>KOG0580|consensus
Probab=44.50 E-value=23 Score=32.05 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=35.3
Q ss_pred ccC-ccccceeeccceEEEEec-CCCEEEEEecC------CCcHHHHHHHHHH
Q psy4056 155 SIE-PNPMGAASLAQVHKATLH-DGSTIALKVQH------RNVRDNANIDIKC 199 (227)
Q Consensus 155 ~fd-~~PiasASIaQVHrA~L~-~G~~VAVKVq~------P~i~~~i~~Dl~~ 199 (227)
+|| ..|+|=|=.|+||.|+.+ ++--||+||.. -++++++...+.+
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEI 75 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEI 75 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEe
Confidence 455 579999999999999998 78899999864 4566666666554
No 350
>KOG0668|consensus
Probab=44.29 E-value=36 Score=30.84 Aligned_cols=30 Identities=13% Similarity=0.241 Sum_probs=27.8
Q ss_pred cCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Q psy4056 175 HDGSTIALKVQHRNVRDNANIDIKCMEALV 204 (227)
Q Consensus 175 ~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~ 204 (227)
.|.++++|||..|==.+.|..++.+|+.+.
T Consensus 61 ~~~eK~ViKiLKPVkkkKIkREikIL~nL~ 90 (338)
T KOG0668|consen 61 TNNEKCVIKILKPVKKKKIKREIKILQNLR 90 (338)
T ss_pred CCCceEEEeeechHHHHHHHHHHHHHHhcc
Confidence 489999999999999999999999998876
No 351
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=44.27 E-value=53 Score=27.78 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=24.9
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i 189 (227)
+.++.++.|+||+|+.+ +++.||||+.+...
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~ 48 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA 48 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC
Confidence 56899999999999864 35789999887653
No 352
>PHA02882 putative serine/threonine kinase; Provisional
Probab=43.73 E-value=20 Score=31.07 Aligned_cols=29 Identities=10% Similarity=0.194 Sum_probs=23.6
Q ss_pred cccceeeccceEEEEecC----CCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLHD----GSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~----G~~VAVKVq~P 187 (227)
+-+|.|+.|.||+|...+ +..+|+|+...
T Consensus 18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~ 50 (294)
T PHA02882 18 KLIGCGGFGCVYETQCASDHCINNQAVAKIENL 50 (294)
T ss_pred eEEecCCCceEEEEEEcCCcccccceEEEeccc
Confidence 459999999999999874 56888887543
No 353
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=43.55 E-value=39 Score=28.03 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=23.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQH 186 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~ 186 (227)
+.++.++.|+|+.++.. +|+.|++|.-.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~ 34 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVN 34 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEe
Confidence 46899999999988876 79999999643
No 354
>KOG0200|consensus
Probab=43.25 E-value=48 Score=32.93 Aligned_cols=32 Identities=31% Similarity=0.372 Sum_probs=27.9
Q ss_pred ccceeeccceEEEEec----C----CCEEEEEecCCCcHH
Q psy4056 160 PMGAASLAQVHKATLH----D----GSTIALKVQHRNVRD 191 (227)
Q Consensus 160 PiasASIaQVHrA~L~----~----G~~VAVKVq~P~i~~ 191 (227)
++|++-.|||++|.++ . -..||||....+...
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~ 342 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS 342 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCc
Confidence 9999999999999987 1 358999999888876
No 355
>KOG1035|consensus
Probab=41.78 E-value=17 Score=39.37 Aligned_cols=56 Identities=16% Similarity=0.246 Sum_probs=38.9
Q ss_pred hhccccCc-cccceeeccceEEEEec-CCCEEEEE-ecCCCcHHHHHHHHHHHHHHHHH
Q psy4056 151 EIFASIEP-NPMGAASLAQVHKATLH-DGSTIALK-VQHRNVRDNANIDIKCMEALVHV 206 (227)
Q Consensus 151 ~~F~~fd~-~PiasASIaQVHrA~L~-~G~~VAVK-Vq~P~i~~~i~~Dl~~l~~l~~~ 206 (227)
..+.+|++ .++|=|-.|+|++++=| ||++.||| |..+.-.+.....++=.+.++++
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL 534 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL 534 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc
Confidence 35566765 78999999999999998 99999998 44444344444444444444443
No 356
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=41.46 E-value=28 Score=31.51 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=30.0
Q ss_pred ccceeeccceEEEEecCCCEEEEEecCCCcHHHHH
Q psy4056 160 PMGAASLAQVHKATLHDGSTIALKVQHRNVRDNAN 194 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~ 194 (227)
|+.+|==|-||+|.-.+|..|||||.+......-.
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~ 89 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR 89 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh
Confidence 78888889999999989999999999987665433
No 357
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=40.66 E-value=60 Score=28.59 Aligned_cols=46 Identities=22% Similarity=0.356 Sum_probs=30.8
Q ss_pred ccccceeeccceEEEEec--------CCCEEEEEecCCCcHH----HHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLH--------DGSTIALKVQHRNVRD----NANIDIKCMEAL 203 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~--------~G~~VAVKVq~P~i~~----~i~~Dl~~l~~l 203 (227)
..+++.++.|+||.|+-. .+..||+|+....... .+..++.+++.+
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l 74 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMI 74 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhh
Confidence 358999999999999753 1247999988755433 344445554433
No 358
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=40.53 E-value=40 Score=28.67 Aligned_cols=28 Identities=7% Similarity=0.052 Sum_probs=25.0
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
++.++.|+|++++-+ +|+.+|+|+-.+.
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~ 52 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAK 52 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehh
Confidence 699999999999987 8899999997764
No 359
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=40.13 E-value=26 Score=34.29 Aligned_cols=31 Identities=10% Similarity=0.212 Sum_probs=24.9
Q ss_pred ccccceeeccceEEEEe-----------------cCCCEEEEEecCCC
Q psy4056 158 PNPMGAASLAQVHKATL-----------------HDGSTIALKVQHRN 188 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L-----------------~~G~~VAVKVq~P~ 188 (227)
.+-||.|+.|.||+|.+ .+|+.||||..+..
T Consensus 150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~ 197 (507)
T PLN03224 150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMD 197 (507)
T ss_pred eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEeccc
Confidence 36799999999999975 25678999987643
No 360
>KOG0983|consensus
Probab=39.68 E-value=27 Score=32.40 Aligned_cols=40 Identities=25% Similarity=0.405 Sum_probs=29.9
Q ss_pred ccceeeccceEEEEec-CCCEEEEEecCCCc-H---HHHHHHHHH
Q psy4056 160 PMGAASLAQVHKATLH-DGSTIALKVQHRNV-R---DNANIDIKC 199 (227)
Q Consensus 160 PiasASIaQVHrA~L~-~G~~VAVKVq~P~i-~---~~i~~Dl~~ 199 (227)
-+|++|-|||.+++.+ .|.-.|||-.+-.= . ++|-.|+.+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldv 143 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDV 143 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhH
Confidence 4899999999999998 79999999766432 2 234455554
No 361
>PF02520 DUF148: Domain of unknown function DUF148; InterPro: IPR003677 This entry represents the domain DUF148, which has no known function.
Probab=38.62 E-value=1.7e+02 Score=22.14 Aligned_cols=63 Identities=10% Similarity=0.168 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHH
Q psy4056 76 NLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAV 140 (227)
Q Consensus 76 ~~~~~~h~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~ 140 (227)
......+...-+.+-..+.+|+.++-|+-.++. ..++-+.+-.+.+..|.++.|+. ...+.-+
T Consensus 43 ~~~~~~~~~~~~~~~~vi~~L~~a~~~l~~I~~-n~~lT~~q~~~~I~~l~~~~~~e-~~~l~~i 105 (113)
T PF02520_consen 43 AQVQAQKEEVRKNVTAVISNLSSAFAKLSAILD-NKSLTRQQQQEAIDALRKQYPEE-VDTLFFI 105 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcccCHHHHHHHHHHHHHHCCHH-HHHHHHH
Confidence 334455566667788888999999999999998 44588899999999999999988 4444333
No 362
>PF15508 NAAA-beta: beta subunit of N-acylethanolamine-hydrolyzing acid amidase
Probab=38.37 E-value=1.3e+02 Score=22.31 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=20.9
Q ss_pred HHHHHHHHHHcCCCCCcHHHHHHHHHHhcC
Q psy4056 99 VYIKVGQHIGALEYLLPKEYVETMKVLHSK 128 (227)
Q Consensus 99 ~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~ 128 (227)
++-.+.++++.....+|++|.++++.+-+.
T Consensus 49 ~~~~v~~~~~~l~~~~~~~~~~EirGIA~~ 78 (95)
T PF15508_consen 49 VLDFVDKLLPHLLRYLPQPYAEEIRGIAKA 78 (95)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 555566666655567788888888877543
No 363
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=37.83 E-value=56 Score=27.33 Aligned_cols=29 Identities=21% Similarity=0.271 Sum_probs=24.6
Q ss_pred cccceeeccceEEEEecC--CCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLHD--GSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~--G~~VAVKVq~P 187 (227)
+.++.+..|.||+|..++ ++.||||....
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~ 36 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINV 36 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeec
Confidence 458999999999999985 68999998654
No 364
>KOG0582|consensus
Probab=36.99 E-value=78 Score=31.02 Aligned_cols=50 Identities=20% Similarity=0.353 Sum_probs=36.3
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHh-CCC
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWV-FPE 213 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~-~p~ 213 (227)
||.|-=|+||+|+-. .|+.||||+.. ++ ....|+..++.-...+..+ .|+
T Consensus 34 IG~G~sa~V~~A~c~p~~e~VAIK~in--LE-kc~~~ld~l~kE~~~msl~~HPN 85 (516)
T KOG0582|consen 34 IGVGASAVVYLARCIPTNEVVAIKIIN--LE-KCNNDLDALRKEVQTMSLIDHPN 85 (516)
T ss_pred EeccceeEeeeeeecccCCEEEEEEee--hh-hhhhhHHHHHHHHHHhhhcCCCC
Confidence 666655999999987 78999999874 33 4566677777777666554 344
No 365
>KOG2052|consensus
Probab=36.99 E-value=46 Score=32.52 Aligned_cols=45 Identities=11% Similarity=0.228 Sum_probs=35.9
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~ 204 (227)
+-||.|=.|-|.||.+ -|+.|||||=.--=++.....-.+.+.++
T Consensus 217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvm 261 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVM 261 (513)
T ss_pred EEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHH
Confidence 4589999999999999 59999999977777777666666665544
No 366
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=36.89 E-value=67 Score=27.39 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=25.4
Q ss_pred cccceeeccceEEEEec------CCCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLH------DGSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~------~G~~VAVKVq~P~i~ 190 (227)
+.++.++.|.||+|+.. ++..|++|+.+.+..
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~ 43 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS 43 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC
Confidence 45889999999999864 336899999887654
No 367
>KOG1164|consensus
Probab=36.55 E-value=49 Score=29.58 Aligned_cols=48 Identities=15% Similarity=0.249 Sum_probs=37.9
Q ss_pred ccccceeeccceEEEEecCC--CEEEEEecCCCcHH---HHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDG--STIALKVQHRNVRD---NANIDIKCMEALVH 205 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G--~~VAVKVq~P~i~~---~i~~Dl~~l~~l~~ 205 (227)
...+|+++.||||.+.-.+. +.+|+|+....... .+..+..++..+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~ 75 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK 75 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh
Confidence 46799999999999997643 58999999875433 57778888777765
No 368
>KOG4717|consensus
Probab=36.36 E-value=20 Score=35.88 Aligned_cols=22 Identities=32% Similarity=0.489 Sum_probs=16.1
Q ss_pred ccceEEEEec------CCCEEEEEecCC
Q psy4056 166 LAQVHKATLH------DGSTIALKVQHR 187 (227)
Q Consensus 166 IaQVHrA~L~------~G~~VAVKVq~P 187 (227)
|||=|-|+.| .|++|||||.-.
T Consensus 26 lG~GHFAVVKLArHVFTGekVAVKviDK 53 (864)
T KOG4717|consen 26 LGRGHFAVVKLARHVFTGEKVAVKVIDK 53 (864)
T ss_pred hcCCceehhhhhhhhcccceeEEEEecc
Confidence 5555666654 899999998654
No 369
>PF11932 DUF3450: Protein of unknown function (DUF3450); InterPro: IPR016866 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are found in an operon along with components of a TonB transport system (typified by Vibrio cholerae TonB2 [], and are predicted to be localized to the periplasmic space. Caution: the low-complexity nature of these sequences produces spurious BLAST hits to chromosome segregation ATPases (which are much longer in length and contain canonical Walker motifs). Accordingly, some members are misidentified as such.
Probab=35.75 E-value=2.7e+02 Score=24.22 Aligned_cols=76 Identities=18% Similarity=0.151 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCCCCcHHHHHHHHHHhc---CCCCCCHHHHHHHHH-----HhcCCChhhhccccCccccceeeccceEE
Q psy4056 100 YIKVGQHIGALEYLLPKEYVETMKVLHS---KAPMSPMKDILAVLK-----EDLGKDPSEIFASIEPNPMGAASLAQVHK 171 (227)
Q Consensus 100 ~iKlGQ~lstr~dllP~~~~~~L~~Lqd---~~p~~~~~~v~~~l~-----~elG~~~~~~F~~fd~~PiasASIaQVHr 171 (227)
.-.|-+++.....+..++-.+.+..|.+ +..-.+-+..+.+++ .++|..+ .||.
T Consensus 111 ~~~L~~~v~~d~Pf~~~eR~~Rl~~L~~~l~~~dv~~~ek~r~vlea~~~E~~yg~~i------------------~~~~ 172 (251)
T PF11932_consen 111 IDELEQFVELDLPFLLEERQERLARLRAMLDDADVSLAEKFRRVLEAYQIEMEYGRTI------------------EVYQ 172 (251)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHhCCce------------------eEEE
Confidence 3344555555544555655554444444 333333344555533 3444433 3588
Q ss_pred EEec-CCCEEEEEecCCCcHHHH
Q psy4056 172 ATLH-DGSTIALKVQHRNVRDNA 193 (227)
Q Consensus 172 A~L~-~G~~VAVKVq~P~i~~~i 193 (227)
+++. ||+++-|.+.|=|--..+
T Consensus 173 ~~i~~dG~~~~V~~LrlGr~~l~ 195 (251)
T PF11932_consen 173 GTITLDGEERQVDFLRLGRVALY 195 (251)
T ss_pred EEEeECCeEEEEEEEeecchhhe
Confidence 8876 899999998887765443
No 370
>KOG0591|consensus
Probab=35.62 E-value=52 Score=30.63 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=25.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEE-ecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALK-VQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVK-Vq~P~i~~~ 192 (227)
+-||-||.|-||++.-. ||..||.| ||+-.+...
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k 60 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAK 60 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHH
Confidence 35889999999999765 99999987 444444433
No 371
>PF03298 Stanniocalcin: Stanniocalcin family; InterPro: IPR004978 Stanniocalcin (STC) is a calcium- and phosphate-regulating hormone produced in bony fish by the corpuscles of Stannius, which are located close to the kidney. It is a major antihypercalcemic hormone in fish. Recent results suggest that the biological repertoires of STCs in mammals will be considerably larger than in fish and may not be limited to mineral metabolism.; GO: 0005179 hormone activity, 0005576 extracellular region
Probab=34.91 E-value=26 Score=30.52 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=49.5
Q ss_pred hcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCcccccee
Q psy4056 95 MNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEPNPMGAA 164 (227)
Q Consensus 95 ~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~~PiasA 164 (227)
.|-..+.++-| -+|+||..+..+|-..--.+....-+.++.-+...+|.++..+|..+...|-++.
T Consensus 140 ~N~~ai~evvq----~~dlF~~r~y~ellq~ll~C~e~~~~~~~~~~~~~~g~~~~~l~~~lq~~~~~~~ 205 (208)
T PF03298_consen 140 SNPEAIVEVVQ----FPDLFPNRYYVELLQSLLECDEETVEAVRDSLMSQLGPNMASLFQLLQNCPCASQ 205 (208)
T ss_pred hChHHHHHhee----chhhcCchHHHHHHHHHHhccHHHHHHHHHHHHHHHhhhHHHHHHHhccCCCcCC
Confidence 34444444444 3678998877777777777777788889999999999999999988877766543
No 372
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=34.64 E-value=66 Score=29.10 Aligned_cols=42 Identities=19% Similarity=0.125 Sum_probs=33.9
Q ss_pred EEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHh
Q psy4056 181 ALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLWLVDETKR 225 (227)
Q Consensus 181 AVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~~~~~~l~~E~~~ 225 (227)
||.+.||+..+.+..|+.++.. ++++.=++.+...++++++.
T Consensus 213 aV~~~hp~a~e~L~RDv~Ni~~---fF~r~gv~~d~e~~l~~i~~ 254 (268)
T COG1718 213 AVTIDHPNAFEFLERDVRNIAR---FFRRKGVEADPEELLEEIKG 254 (268)
T ss_pred ccccCCCchHHHHHHHHHHHHH---HHHHcCCCCCHHHHHHHHhh
Confidence 6677899999999999998644 55666677888888888765
No 373
>KOG0198|consensus
Probab=34.51 E-value=60 Score=29.86 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=30.7
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc---HHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV---RDNANIDIKCMEA 202 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i---~~~i~~Dl~~l~~ 202 (227)
+-+|.+|.|.||.|+.+ +|+..|||-.-=.- .+.+...+.+|..
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~ 70 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSR 70 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHh
Confidence 56899999999999998 59999999544331 2234444444443
No 374
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=33.40 E-value=1.1e+02 Score=25.71 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=26.4
Q ss_pred cccceeeccceEEEEecC------CCEEEEEecCCCcH
Q psy4056 159 NPMGAASLAQVHKATLHD------GSTIALKVQHRNVR 190 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~------G~~VAVKVq~P~i~ 190 (227)
+.++.++.|.||+|..++ +..|++|..+.+..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~ 49 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS 49 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC
Confidence 569999999999999863 36899999877653
No 375
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=33.38 E-value=88 Score=27.47 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=27.4
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRDN 192 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~~ 192 (227)
++++.+-.|+|+.+.. +++++|||+-+|.....
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~ 69 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT 69 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch
Confidence 5788899999999766 78899999999887543
No 376
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=33.14 E-value=66 Score=27.74 Aligned_cols=26 Identities=12% Similarity=0.134 Sum_probs=20.0
Q ss_pred ceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 162 GAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 162 asASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
+.++.+.|++++. +|+.||||+...+
T Consensus 11 ~~~~~v~~~~~~~-~~~~~avK~~~~~ 36 (314)
T cd08216 11 EDLMIVHLAKHKP-TNTLVAVKKINLD 36 (314)
T ss_pred cCCceEEEEEecC-CCCEEEEEEEecc
Confidence 4556677777776 8999999997755
No 377
>smart00811 Alpha_kinase Alpha-kinase family. This family is a novel family of eukaryotic protein kinase catalytic domains, which have no detectable similarity to conventional kinases. The family contains myosin heavy chain kinases and Elongation Factor-2 kinase and a bifunctional ion channel. This family is known as the alpha-kinase family. The structure of the kinase domain revealed unexpected similarity to eukaryotic protein kinases in the catalytic core as well as to metabolic enzymes with ATP-grasp domains.
Probab=32.99 E-value=1.7e+02 Score=24.90 Aligned_cols=58 Identities=12% Similarity=0.101 Sum_probs=42.8
Q ss_pred ccccCccccceeeccceEEEEec----CCCEEEEEecCCCcH----HHHHHHHHHHHHHHHHHHHh
Q psy4056 153 FASIEPNPMGAASLAQVHKATLH----DGSTIALKVQHRNVR----DNANIDIKCMEALVHVVAWV 210 (227)
Q Consensus 153 F~~fd~~PiasASIaQVHrA~L~----~G~~VAVKVq~P~i~----~~i~~Dl~~l~~l~~~~~~~ 210 (227)
...+++.|.|-|..=.+|+++.. .|+..|+|.-.+... +..-.|++.-.....+++.+
T Consensus 11 ~v~i~~~pFa~G~~R~a~~~~~~~~~~~~~~~V~K~~~~~~~~~~~~~yf~d~~~q~~a~~~a~~F 76 (198)
T smart00811 11 GVKIELKPFAKGAMRVAFRVKDLSEFGSGTECVAKYFKKEYKNTVEDRYFEDVEMQMVAKKFAEEF 76 (198)
T ss_pred EEEEcCCccCCCceeeeEEEEEeccCCCCCEEEEEEeccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 45778999999999999999985 689999998888753 33445777655544454443
No 378
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=32.59 E-value=67 Score=26.92 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=23.5
Q ss_pred cceeeccceEEEEecCC---CEEEEEecCCCcH
Q psy4056 161 MGAASLAQVHKATLHDG---STIALKVQHRNVR 190 (227)
Q Consensus 161 iasASIaQVHrA~L~~G---~~VAVKVq~P~i~ 190 (227)
+|.++.|+||+|+..++ ..|+||.......
T Consensus 3 lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~ 35 (269)
T cd05042 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRASAT 35 (269)
T ss_pred CCccCCceEEEEEEecCCCCeEEEEeecCccCC
Confidence 78899999999987644 5799997765543
No 379
>KOG0588|consensus
Probab=32.23 E-value=37 Score=34.78 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=37.1
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC------cHHHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN------VRDNANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~------i~~~i~~Dl~~l~~l~ 204 (227)
.-+|.||=|-|-.|+-. +|+.+||||.--. ....|+.+|.+|+.+-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~ 70 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE 70 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc
Confidence 35899999999999976 8999999997655 3567788888887654
No 380
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=31.46 E-value=86 Score=26.42 Aligned_cols=42 Identities=14% Similarity=0.028 Sum_probs=32.7
Q ss_pred eeccceEEEEecCCCEEEEEecCCCcHHHHHHHHHHHHHHHHH
Q psy4056 164 ASLAQVHKATLHDGSTIALKVQHRNVRDNANIDIKCMEALVHV 206 (227)
Q Consensus 164 ASIaQVHrA~L~~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~ 206 (227)
+|-++||+... +|++++||+..+.-...+..+..+++.+...
T Consensus 10 ~~~~~v~~~~~-~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~ 51 (244)
T cd05150 10 QSGATVYRLDG-KNPGLYLKIAPSGPTYELEREAERLRWLAGK 51 (244)
T ss_pred CCcCeEEEEcC-CCCcEEEEecCCCcccchHHHHHHHHHHHhc
Confidence 37799999987 5689999999876555677788888877653
No 381
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=31.40 E-value=30 Score=19.75 Aligned_cols=18 Identities=11% Similarity=-0.035 Sum_probs=8.0
Q ss_pred HHHhcCCCCCCHHHHHHH
Q psy4056 123 KVLHSKAPMSPMKDILAV 140 (227)
Q Consensus 123 ~~Lqd~~p~~~~~~v~~~ 140 (227)
++|||+.-|+++++..++
T Consensus 1 srlqdnmmPMSPddy~~l 18 (23)
T PF12162_consen 1 SRLQDNMMPMSPDDYDEL 18 (23)
T ss_dssp S---TS---S-HHHHHHH
T ss_pred CchhhcccCCCHHHHHHH
Confidence 468999999998876554
No 382
>KOG0661|consensus
Probab=30.79 E-value=55 Score=32.22 Aligned_cols=55 Identities=13% Similarity=0.172 Sum_probs=37.0
Q ss_pred cceeeccceEEEEec-CCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCcch
Q psy4056 161 MGAASLAQVHKATLH-DGSTIALKVQHRNVRDNANIDIKCMEALVHVVAWVFPEFKFLW 218 (227)
Q Consensus 161 iasASIaQVHrA~L~-~G~~VAVKVq~P~i~~~i~~Dl~~l~~l~~~~~~~~p~~~~~~ 218 (227)
+|.|+.|-|++|+-+ +|+.||||=..--... ..|...|+-+-.+ .++-|.=++..
T Consensus 18 lGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~ee~~nLREvksL-~kln~hpniik 73 (538)
T KOG0661|consen 18 LGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--WEECMNLREVKSL-RKLNPHPNIIK 73 (538)
T ss_pred hcCCcceeEEEeeecCCCceeeHHHHHhhhcc--HHHHHHHHHHHHH-HhcCCCCcchh
Confidence 788999999999988 8999999965544433 4566666665443 44444433333
No 383
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=30.44 E-value=54 Score=27.24 Aligned_cols=25 Identities=16% Similarity=0.089 Sum_probs=21.5
Q ss_pred eeccceEEEEec-CCCEEEEEecCCC
Q psy4056 164 ASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 164 ASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
|++|-||+++-+ +|+.||+|+.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~ 29 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS 29 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch
Confidence 678889999886 8999999998775
No 384
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=29.89 E-value=94 Score=26.99 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=26.3
Q ss_pred ccccceeeccceEEEEec--------CCCEEEEEecCCCcH
Q psy4056 158 PNPMGAASLAQVHKATLH--------DGSTIALKVQHRNVR 190 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~--------~G~~VAVKVq~P~i~ 190 (227)
.+.++.++.|.||+|+-. ++..||+|+.+....
T Consensus 17 ~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~ 57 (314)
T cd05099 17 GKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT 57 (314)
T ss_pred eeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC
Confidence 467999999999999752 345799999887654
No 385
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=29.57 E-value=34 Score=28.70 Aligned_cols=30 Identities=20% Similarity=0.458 Sum_probs=23.1
Q ss_pred cccceeeccceEEEEec-CC-------CEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DG-------STIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G-------~~VAVKVq~P~ 188 (227)
++++.++.|+||+|..+ +| .+|++|+....
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~ 38 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS 38 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch
Confidence 46899999999999875 23 35999987544
No 386
>PF08277 PAN_3: PAN-like domain; InterPro: IPR006583 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []. These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs The PAN-3 or CW is a domain associated with a number of Caenorhabditis elegans hypothetical proteins.
Probab=29.06 E-value=47 Score=22.72 Aligned_cols=21 Identities=29% Similarity=0.550 Sum_probs=14.1
Q ss_pred eeccceEEEEecCCCEEEEEe
Q psy4056 164 ASLAQVHKATLHDGSTIALKV 184 (227)
Q Consensus 164 ASIaQVHrA~L~~G~~VAVKV 184 (227)
+++.+|-+-.-.+|..||+|+
T Consensus 51 ~~i~~v~~~~~~~~~~VA~K~ 71 (71)
T PF08277_consen 51 GSISTVQKTDSSSGNKVAFKI 71 (71)
T ss_pred CCEEEEEEeecCCCeEEEEEC
Confidence 345555554445899999996
No 387
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=28.65 E-value=71 Score=34.17 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=25.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
..|+.++.|.||+|+.+ +++.||+|+...
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~ 48 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISY 48 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEec
Confidence 56999999999999987 678999998764
No 388
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=28.36 E-value=83 Score=26.21 Aligned_cols=47 Identities=6% Similarity=0.063 Sum_probs=34.4
Q ss_pred ccccceeeccceEEEEecC--CCEEEEEecCCCcHHHH--HHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHD--GSTIALKVQHRNVRDNA--NIDIKCMEALV 204 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~--G~~VAVKVq~P~i~~~i--~~Dl~~l~~l~ 204 (227)
-+|+..|...+||+-+..+ ++.|++|+-.++-...+ +.+..+++.+.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~ 53 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLS 53 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHH
Confidence 3688899999999998865 78999999888744333 34556665554
No 389
>KOG0663|consensus
Probab=28.05 E-value=47 Score=31.52 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=26.5
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCCc
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRNV 189 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~i 189 (227)
+-|+.||-|-||||+-+ +++-||+|=.+++-
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmek 113 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK 113 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeeccccc
Confidence 45999999999999987 89999998766654
No 390
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=27.27 E-value=79 Score=30.59 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=24.5
Q ss_pred cCccccceeeccceEEEEecCCCEEEEEecCCC
Q psy4056 156 IEPNPMGAASLAQVHKATLHDGSTIALKVQHRN 188 (227)
Q Consensus 156 fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~ 188 (227)
...+.+|.++-|.||+|.+ .|+.+++|+..+.
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~ 367 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEY-LGRDAVIKERVPK 367 (535)
T ss_pred CccceeccCCcEEEEEEee-cCccceeEEEecc
Confidence 3467899999999999987 5666777765543
No 391
>KOG0592|consensus
Probab=27.20 E-value=30 Score=34.48 Aligned_cols=27 Identities=30% Similarity=0.332 Sum_probs=24.3
Q ss_pred cccceeeccceEEEEec-CCCEEEEEec
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQ 185 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq 185 (227)
+-+|-||-.+|++|+-+ .|+++||||.
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl 106 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVL 106 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhh
Confidence 34999999999999987 7999999985
No 392
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=27.13 E-value=57 Score=27.49 Aligned_cols=21 Identities=29% Similarity=0.328 Sum_probs=16.7
Q ss_pred eEEEEecCCCEEEEEecCCCc
Q psy4056 169 VHKATLHDGSTIALKVQHRNV 189 (227)
Q Consensus 169 VHrA~L~~G~~VAVKVq~P~i 189 (227)
||.|.-.+|++||||+=+.+.
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~ 22 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGR 22 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S--
T ss_pred EEEEECCCCCEEEEEEeccCc
Confidence 889998899999999988764
No 393
>TIGR00270 conserved hypothetical protein TIGR00270.
Probab=26.86 E-value=3.6e+02 Score=22.13 Aligned_cols=71 Identities=10% Similarity=0.093 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHcCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCChhhhccccCc
Q psy4056 79 SKVHKEAAEQLLELCKMNKGVYIKVGQHIGALEYLLPKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDPSEIFASIEP 158 (227)
Q Consensus 79 ~~~h~~~a~~l~~~~~~lGg~~iKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~~~~F~~fd~ 158 (227)
.++-+..+.+|+.+-+++|=+.-.||+.+.. ...+ ++++...- ..|..++...|.+.||.++.++|.+.+.
T Consensus 64 ~~l~~~~g~~Ir~~Re~~glSqeeLA~~lgv-----s~s~---IsriE~G~-~~Ps~~~l~kLa~~Lgvsl~el~~e~~~ 134 (154)
T TIGR00270 64 EELVEDYGIIIRREREKRGWSQEQLAKKIQE-----KESL---IKKIENAE-IEPEPKVVEKLEKLLKIKLREQVPEIKI 134 (154)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHhCC-----CHHH---HHHHHCCC-CCCCHHHHHHHHHHhCCCHHHHccchhh
Confidence 3566678899999999999999999987763 3444 44444322 3344567788899999999998865544
No 394
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=26.05 E-value=3.2e+02 Score=25.22 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHhcCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCC-cHHHHHHHHHHHHHHHH
Q psy4056 133 PMKDILAVLKEDLGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRN-VRDNANIDIKCMEALVH 205 (227)
Q Consensus 133 ~~~~v~~~l~~elG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~-i~~~i~~Dl~~l~~l~~ 205 (227)
+.+....+.+..+|.. -+..+++| +-..||+-...||+. ++||-+|+ -+..+...+..|..++.
T Consensus 13 ~~~~~~~l~~~~~g~~-------~~~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~~~~~~i~~el~~l~~La~ 77 (331)
T COG2334 13 SDEAAAALEAYHYGLD-------GSLRGLNS-EENSNFRVQTEDGRY-ILKIYRPGWTRAEIPFELALLQHLAE 77 (331)
T ss_pred hHHHHHHHHhcCcCcc-------cccccccc-ccCceEEEEecCCCe-EEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 3344444455555543 13467888 889999999988888 99999998 66667777777666654
No 395
>PRK01964 4-oxalocrotonate tautomerase; Provisional
Probab=24.68 E-value=55 Score=22.17 Aligned_cols=33 Identities=9% Similarity=0.186 Sum_probs=25.9
Q ss_pred HHHHHHHHHhcCCChhhhccccCccccceeecc
Q psy4056 135 KDILAVLKEDLGKDPSEIFASIEPNPMGAASLA 167 (227)
Q Consensus 135 ~~v~~~l~~elG~~~~~~F~~fd~~PiasASIa 167 (227)
+.+-+.+.+.+|.+.+++|..|++.|-.-=|+|
T Consensus 22 ~~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~g 54 (64)
T PRK01964 22 REVTEAISATLDVPKERVRVIVNEVPSSHWGVA 54 (64)
T ss_pred HHHHHHHHHHhCcChhhEEEEEEEcChHHeeEC
Confidence 445666788999999999999998886655554
No 396
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=24.39 E-value=1.2e+02 Score=25.19 Aligned_cols=29 Identities=21% Similarity=0.163 Sum_probs=23.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHR 187 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P 187 (227)
+.++.++.|.||+++.. .+..+++|+.+.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~ 35 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKE 35 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEecc
Confidence 56999999999999876 456677777654
No 397
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=23.82 E-value=1.5e+02 Score=25.26 Aligned_cols=46 Identities=11% Similarity=0.211 Sum_probs=34.6
Q ss_pred cccceeeccceEEEEecCCCEEEEEecCCCcHH---HHHHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLHDGSTIALKVQHRNVRD---NANIDIKCMEALVH 205 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~~---~i~~Dl~~l~~l~~ 205 (227)
.|+..|--.++|+.+ .+|++++||+..++-.. ....+..+++.+..
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~ 50 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKALGVDRQREYQILQALSA 50 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCcccccccCcHHHHHHHHHHHHh
Confidence 367788889999888 47889999997776433 35667777777765
No 398
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=22.37 E-value=1.7e+02 Score=25.05 Aligned_cols=45 Identities=7% Similarity=0.087 Sum_probs=35.1
Q ss_pred ccccceeeccceEEEEecCCCEEEEEecCCCc-HHHHHHHHHHHHHHHH
Q psy4056 158 PNPMGAASLAQVHKATLHDGSTIALKVQHRNV-RDNANIDIKCMEALVH 205 (227)
Q Consensus 158 ~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i-~~~i~~Dl~~l~~l~~ 205 (227)
.+|+++|-=+=||+. .|.+.++|+.+|+. ...+..+.++++.+..
T Consensus 6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~ 51 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFDASRKVFS 51 (226)
T ss_pred heeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 478999999999973 36678999999977 4557777778777653
No 399
>PF11517 Nab2: Nuclear abundant poly(A) RNA-bind protein 2 (Nab2); InterPro: IPR021083 Nab2 is a yeast heterogeneous nuclear ribonucleoprotein that modulates poly(A) tail length and mRNA. This is the N-terminal domain of the protein which mediates interactions with the C-terminal globular domain, Myosin-like protein 1 and the mRNA export factor, Gfd1 []. The N-terminal domain of Nab2 shows a structure of a helical fold. The N-terminal domain of Nab2 is thought to mediate protein:protein interactions that facilitate the nuclear export of mRNA []. An essential hydrophobic Phe73 patch on the N-terminal domain is thought to be an important component of the interface between Nab2 and Mlp1 [].; PDB: 3LCN_B 2V75_A 2JPS_A.
Probab=22.32 E-value=28 Score=26.97 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHhc-----CCChhhhccccC
Q psy4056 115 PKEYVETMKVLHSKAPMSPMKDILAVLKEDL-----GKDPSEIFASIE 157 (227)
Q Consensus 115 P~~~~~~L~~Lqd~~p~~~~~~v~~~l~~el-----G~~~~~~F~~fd 157 (227)
|++..++|+.|.|.+++..+..+-+..-.++ |.+++.+...+.
T Consensus 47 ~esivqELssLFD~vs~~~l~~VVQtaF~ale~Lq~Ge~~e~iv~Ki~ 94 (107)
T PF11517_consen 47 VESIVQELSSLFDSVSTEALTDVVQTAFFALEALQQGETVENIVSKIR 94 (107)
T ss_dssp HHHHHHHHHHH-TTS-HHHHHHHHHHHHHHHHHHHTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 4566666666666666555544333222221 556666665554
No 400
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=22.30 E-value=63 Score=21.53 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCChhhhccccCccccceeecc
Q psy4056 135 KDILAVLKEDLGKDPSEIFASIEPNPMGAASLA 167 (227)
Q Consensus 135 ~~v~~~l~~elG~~~~~~F~~fd~~PiasASIa 167 (227)
..+-+.+.+.+|.+.++++..|++.|-..=++|
T Consensus 22 ~~it~~l~~~lg~~~~~v~V~i~e~~~~~w~~g 54 (63)
T TIGR00013 22 EGVTEAMAETLGANLESIVVIIDEMPKNNYGIG 54 (63)
T ss_pred HHHHHHHHHHhCCCcccEEEEEEEcCHHHeeEC
Confidence 345667788899999999999998886665554
No 401
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=22.25 E-value=1.7e+02 Score=24.54 Aligned_cols=30 Identities=13% Similarity=0.229 Sum_probs=22.2
Q ss_pred ccceeeccceEEEEecCCC---EEEEEecCCCc
Q psy4056 160 PMGAASLAQVHKATLHDGS---TIALKVQHRNV 189 (227)
Q Consensus 160 PiasASIaQVHrA~L~~G~---~VAVKVq~P~i 189 (227)
++|.++.|.||+|...++. .+++|......
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~ 34 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA 34 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC
Confidence 5889999999999876543 56677655543
No 402
>KOG0610|consensus
Probab=22.05 E-value=82 Score=30.49 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=25.9
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN 188 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~ 188 (227)
.-+|+|.||-||.+.++ ++.--|+||.--.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~ 113 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKE 113 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHH
Confidence 45999999999999998 4689999998654
No 403
>PRK00745 4-oxalocrotonate tautomerase; Provisional
Probab=21.95 E-value=70 Score=21.30 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCChhhhccccCccccceeecc
Q psy4056 135 KDILAVLKEDLGKDPSEIFASIEPNPMGAASLA 167 (227)
Q Consensus 135 ~~v~~~l~~elG~~~~~~F~~fd~~PiasASIa 167 (227)
+.+-+.+.+.+|.+.+++|..|++.|-..-++|
T Consensus 22 ~~it~~l~~~~~~p~~~v~V~i~e~~~~~w~~g 54 (62)
T PRK00745 22 EEITRVTVETLGCPPESVDIIITDVKRENWATG 54 (62)
T ss_pred HHHHHHHHHHcCCChhHEEEEEEEcChHHeeEC
Confidence 345667888999999999999998876665554
No 404
>cd06461 M2_ACE Peptidase family M2 Angiotensin converting enzyme (ACE, EC 3.4.15.1) is a membrane-bound, zinc dependent dipeptidase that catalyzes the conversion of the decapeptide angiotensin I to the potent vasopressor ocatapeptide angiotensin II, by removing two C-terminal amino acids. There are two forms of the enzyme in humans, the ubiquitous somatic ACE and the sperm-specific germinal ACE, both encoded by the same gene through transcription from alternative promoters. Somatic ACE has two tandem active sites with distinct catalytic properties, whereas germinal ACE, the function of which is largely unknown, has just a single active site. Recently, an ACE homolog, ACE2, has been identified in humans that differs from ACE; it preferentially removes carboxy-terminal hydrophobic or basic amino acids and appears to be important in cardiac function. ACE homologs (also known as members of the M2 gluzincin family) have been found in a wide variety of species, including those that neither h
Probab=21.89 E-value=2.6e+02 Score=27.29 Aligned_cols=81 Identities=9% Similarity=0.005 Sum_probs=52.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHc-------CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHH
Q psy4056 69 PTSEEYSNLKSKVHKEAAEQLLELCKMNKGVYIKVGQHIGA-------LEYLLPKEYVETMKVLHSKAPMSPMKDILAVL 141 (227)
Q Consensus 69 ~~~~~~~~~~~~~h~~~a~~l~~~~~~lGg~~iKlGQ~lst-------r~dllP~~~~~~L~~Lqd~~p~~~~~~v~~~l 141 (227)
.+.++....+.+.|...+..+...+.++=-+.-|.++.+.- |.+.=++++.+....+...+-|. +.++.+.+
T Consensus 44 ~D~~~r~~aW~~w~~~~g~~~~~~y~~lV~lrn~~A~~~Gf~n~~~~wR~~Ye~~d~~~~~e~i~~~v~Pl-y~~Lh~~~ 122 (477)
T cd06461 44 RDYDELLYAWEGWRDAVGPPMRPLYERYVELANEAAKLNGFVDAGEYWRSEYETPDFEQDVERLWEELKPL-YLQLHAYV 122 (477)
T ss_pred CCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHcCCCCHHHHhHhcCCHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 34456666666777667666666655543333333333321 44555678888888888888887 77778888
Q ss_pred HHhcCCChh
Q psy4056 142 KEDLGKDPS 150 (227)
Q Consensus 142 ~~elG~~~~ 150 (227)
++.||....
T Consensus 123 r~~L~~~y~ 131 (477)
T cd06461 123 RRKLRKKYG 131 (477)
T ss_pred HHHHHHhcc
Confidence 888886653
No 405
>KOG0615|consensus
Probab=21.36 E-value=81 Score=30.59 Aligned_cols=46 Identities=17% Similarity=0.382 Sum_probs=32.0
Q ss_pred cccceeeccceEEEEec-CCCEEEEEecCCC--------cHHH--HHHHHHHHHHHH
Q psy4056 159 NPMGAASLAQVHKATLH-DGSTIALKVQHRN--------VRDN--ANIDIKCMEALV 204 (227)
Q Consensus 159 ~PiasASIaQVHrA~L~-~G~~VAVKVq~P~--------i~~~--i~~Dl~~l~~l~ 204 (227)
+-+|+|-.|-|-.|.=+ +|+.||||+.+-. .... +...+.+|+.+.
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~ 234 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS 234 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC
Confidence 45888888888888776 8999999997643 2222 336666666543
No 406
>PF13565 HTH_32: Homeodomain-like domain
Probab=21.35 E-value=2e+02 Score=19.66 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCh
Q psy4056 115 PKEYVETMKVLHSKAPMSPMKDILAVLKEDLGKDP 149 (227)
Q Consensus 115 P~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elG~~~ 149 (227)
+++..+.+..+-..-|-.+..++...|++++|.++
T Consensus 32 ~~e~~~~i~~~~~~~p~wt~~~i~~~L~~~~g~~~ 66 (77)
T PF13565_consen 32 DPEQRERIIALIEEHPRWTPREIAEYLEEEFGISV 66 (77)
T ss_pred cHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhCCCC
Confidence 67777888888888888899999999999998654
No 407
>PF14875 PIP49_N: N-term cysteine-rich ER, FAM69
Probab=20.86 E-value=72 Score=26.49 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=16.8
Q ss_pred cceeeccceEEEEecCCCEEEEE
Q psy4056 161 MGAASLAQVHKATLHDGSTIALK 183 (227)
Q Consensus 161 iasASIaQVHrA~L~~G~~VAVK 183 (227)
+.+..=-|||.|.. .|++|++|
T Consensus 78 L~~~~~~~Vy~g~W-~~~~vviK 99 (158)
T PF14875_consen 78 LSHKPGKQVYSGSW-KGRPVVIK 99 (158)
T ss_pred hCCCCCceEEEEEE-CCcEEEEE
Confidence 33444458999997 68899999
No 408
>PLN02756 S-methyl-5-thioribose kinase
Probab=20.74 E-value=1.9e+02 Score=27.85 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=39.9
Q ss_pred CCCCCCHHHHHHHHHHh------cCCChhhhccccCccccceeeccceEEEEecCCCEEEEEecCCCcH
Q psy4056 128 KAPMSPMKDILAVLKED------LGKDPSEIFASIEPNPMGAASLAQVHKATLHDGSTIALKVQHRNVR 190 (227)
Q Consensus 128 ~~p~~~~~~v~~~l~~e------lG~~~~~~F~~fd~~PiasASIaQVHrA~L~~G~~VAVKVq~P~i~ 190 (227)
...+++.+.+..-+.+. +|.. +....-++++-|.+..||+-+. +|+.|+||...|+++
T Consensus 5 ~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r 68 (418)
T PLN02756 5 EFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIR 68 (418)
T ss_pred ccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCcccc
Confidence 34455556666655554 4322 2345678899999999999775 566899998887776
No 409
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=20.28 E-value=1.1e+02 Score=26.65 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=30.3
Q ss_pred cceeeccceEEEEecCCCEEEEEecCCCcH-HHHHHHHHHHHHHH
Q psy4056 161 MGAASLAQVHKATLHDGSTIALKVQHRNVR-DNANIDIKCMEALV 204 (227)
Q Consensus 161 iasASIaQVHrA~L~~G~~VAVKVq~P~i~-~~i~~Dl~~l~~l~ 204 (227)
+|-|--+-||.+..+ |.+||+|||+++-. ..++..-++++.+.
T Consensus 30 L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~r~~l~kEakiLeil~ 73 (201)
T COG2112 30 LAKGTTSVVYLGEWR-GGEVALKVRRRDSPRRNLEKEAKILEILA 73 (201)
T ss_pred hhcccccEEEEeecc-CceEEEEEecCCcchhhHHHHHHHHHHhh
Confidence 455555668888884 66999999998765 45666666665544
No 410
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=20.04 E-value=76 Score=20.66 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCChhhhccccCccccceeecc
Q psy4056 135 KDILAVLKEDLGKDPSEIFASIEPNPMGAASLA 167 (227)
Q Consensus 135 ~~v~~~l~~elG~~~~~~F~~fd~~PiasASIa 167 (227)
+.+-+.+.+.+|.+.++++..|++.|-..=++|
T Consensus 21 ~~i~~~l~~~~g~~~~~v~V~i~e~~~~~~~~g 53 (58)
T cd00491 21 ERVTEAVSEILGAPEATIVVIIDEMPKENWGIG 53 (58)
T ss_pred HHHHHHHHHHhCcCcccEEEEEEEeCchhceEC
Confidence 445667788899999999999988775554443
Done!