BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4061
         (119 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|C4JEE1|ECM14_UNCRE Putative metallocarboxypeptidase ECM14 OS=Uncinocarpus reesii
           (strain UAMH 1704) GN=ECM14 PE=3 SV=1
          Length = 584

 Score = 32.3 bits (72), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 59  KYRDNAKYQYYKKSTSPLIPIPPSVYVEVPKFLKFILCCEYPLYDWMSEHPTDPP 113
           K RD   Y +     S +IP    VY  V +F KF+L  E P  DW +E     P
Sbjct: 490 KLRDKGSYGFLLPR-SNIIPTGKEVYNAVLEFGKFLLGKEAPSVDWDAEFQVSDP 543


>sp|Q9FLV9|SLAH3_ARATH S-type anion channel SLAH3 OS=Arabidopsis thaliana GN=SLAH3 PE=1
           SV=1
          Length = 635

 Score = 30.8 bits (68), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 17/113 (15%)

Query: 2   SRHPNYFGEIVLW--WGMFIISLNVIRGAEFVCVLSPIFITLIILFLSGIPLLERSSDHK 59
           +  P  F  + LW   G++ IS+ +I        ++ I++  IILF   +    R   H 
Sbjct: 281 TAEPTKFLHVPLWINQGLWFISVALI------LTIATIYLLKIILFFEAV---RREYYHP 331

Query: 60  YRDNAKYQYYKKSTSPLIPIPPSVYVEVPKFLKFIL-----CCEYPLY-DWMS 106
            R N  +  +       + +PPS+  ++P FL ++L     C E  +Y  WMS
Sbjct: 332 IRINFFFAPFISLLFLALGVPPSIITDLPHFLWYLLMFPFICLELKIYGQWMS 384


>sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus
           GN=Srd5a1 PE=1 SV=2
          Length = 259

 Score = 29.3 bits (64), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 14/73 (19%)

Query: 6   NYFGEIVLWWGMFIISLNVIRGAEFVCVLSPIFITLIILFLSGIPLLERSSDHKYRDNAK 65
           NYFGE+V W G  + S + ++G  F            +  LS   LL R+  H    + K
Sbjct: 198 NYFGELVEWCGFALASWS-LQGVVFA-----------LFTLS--TLLTRAKQHHQWYHEK 243

Query: 66  YQYYKKSTSPLIP 78
           ++ Y KS   LIP
Sbjct: 244 FEDYPKSRKILIP 256


>sp|O74543|YCV4_SCHPO Uncharacterized amino-acid permease C777.04 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=SPCC777.04 PE=3 SV=1
          Length = 521

 Score = 29.3 bits (64), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 11/59 (18%)

Query: 4   HPNYFGEIVLWWGMFIISLNVIRGAEFVCVLSPIFITLIILFLSGIPLLERSSDHKYRD 62
           H  YFGE+  W       L+ ++    + VL  + IT I++   G P+  +   H +RD
Sbjct: 177 HVKYFGEVEFW-------LSAVK----ILVLVTLIITCIVITSGGTPVHHKIGFHYWRD 224


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.143    0.473 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,356,976
Number of Sequences: 539616
Number of extensions: 1885552
Number of successful extensions: 4554
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4550
Number of HSP's gapped (non-prelim): 10
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)