RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4065
(348 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 54.3 bits (130), Expect = 1e-10
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSCSVCGKTFTRREHLRRHQQI 64
+ + C C + F K RH L P C VCGK F + HL H +I
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG--------CGVCGKKFKMKHHLVGHMKI 52
Query: 65 H 65
H
Sbjct: 53 H 53
Score = 54.3 bits (130), Expect = 1e-10
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSCSVCGKTFTRREHLRRHQQI 172
+ + C C + F K RH L P C VCGK F + HL H +I
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG--------CGVCGKKFKMKHHLVGHMKI 52
Query: 173 H 173
H
Sbjct: 53 H 53
Score = 33.1 bits (75), Expect = 0.004
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 280 RERPPKPIPKCDVCKKVFSRRSHLLRHLKRLH 311
C VC K F + HL+ H ++H
Sbjct: 23 SMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH 53
Score = 27.3 bits (60), Expect = 0.37
Identities = 7/24 (29%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLHN 312
C C K F+ +S RH+
Sbjct: 5 PCQ-CGKSFTHKSQRDRHMSMHLG 27
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 49.5 bits (119), Expect = 3e-09
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
+ F C VC + F R+EHL+RH + H E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 49.5 bits (119), Expect = 3e-09
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
+ F C VC + F R+EHL+RH + H E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 34.5 bits (80), Expect = 6e-04
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
R F C+VC + F R+EHL RH R+H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH-YRSH 25
Score = 34.5 bits (80), Expect = 6e-04
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
R F C+VC + F R+EHL RH R+H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH-YRSH 25
Score = 34.5 bits (80), Expect = 6e-04
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C+VC + F+R+ HL RH R H
Sbjct: 4 VCEVCTRAFARQEHLKRH-YRSH 25
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 48.4 bits (116), Expect = 8e-09
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
KP+ C CGK F+R L +HQ++H E
Sbjct: 6 KPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 48.4 bits (116), Expect = 8e-09
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
KP+ C CGK F+R L +HQ++H E
Sbjct: 6 KPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 34.1 bits (79), Expect = 9e-04
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C C K FSR S L++H +R+H
Sbjct: 9 GCVECGKAFSRSSILVQH-QRVH 30
Score = 33.0 bits (76), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
+P+ C C + F R LV+H +R H
Sbjct: 6 KPYGCVECGKAFSRSSILVQH-QRVH 30
Score = 33.0 bits (76), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
+P+ C C + F R LV+H +R H
Sbjct: 6 KPYGCVECGKAFSRSSILVQH-QRVH 30
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 47.6 bits (114), Expect = 1e-08
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIH 65
KPF C +C + F+R +HL H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 47.6 bits (114), Expect = 1e-08
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIH 173
KPF C +C + F+R +HL H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 34.5 bits (80), Expect = 6e-04
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
+C +C + FSR HL H R H
Sbjct: 5 QCRICMRNFSRSDHLTTH-IRTH 26
Score = 32.6 bits (75), Expect = 0.003
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
+PFQC +C + F R +HL H R H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTH-IRTH 26
Score = 32.6 bits (75), Expect = 0.003
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
+PFQC +C + F R +HL H R H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTH-IRTH 26
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 47.0 bits (112), Expect = 2e-08
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
K F+C C K F R +HL +H + H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 47.0 bits (112), Expect = 2e-08
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
K F+C C K F R +HL +H + H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 33.1 bits (76), Expect = 0.002
Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C C K F R HL +H + H
Sbjct: 4 ACPECPKRFMRSDHLSKH-IKTH 25
Score = 31.9 bits (73), Expect = 0.005
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
+ F C C + F+R +HL +H + H
Sbjct: 1 KKFACPECPKRFMRSDHLSKH-IKTH 25
Score = 31.9 bits (73), Expect = 0.005
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
+ F C C + F+R +HL +H + H
Sbjct: 1 KKFACPECPKRFMRSDHLSKH-IKTH 25
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 46.8 bits (112), Expect = 3e-08
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIH 65
KP+ C CGK F++ L HQ+IH
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 46.8 bits (112), Expect = 3e-08
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIH 173
KP+ C CGK F++ L HQ+IH
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 34.5 bits (80), Expect = 6e-04
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
KC C K FS+ S L+ H +R+H
Sbjct: 4 KCLECGKAFSQNSGLINH-QRIH 25
Score = 30.3 bits (69), Expect = 0.017
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
+P++C C + F + L+ H +R H
Sbjct: 1 KPYKCLECGKAFSQNSGLINH-QRIH 25
Score = 30.3 bits (69), Expect = 0.017
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
+P++C C + F + L+ H +R H
Sbjct: 1 KPYKCLECGKAFSQNSGLINH-QRIH 25
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.2 bits (110), Expect = 6e-08
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
KP++CS C KTF +++ L H + +
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 46.2 bits (110), Expect = 6e-08
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
KP++CS C KTF +++ L H + +
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 34.6 bits (80), Expect = 6e-04
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAHD 31
+P+ C C++ F +K+ L H KR HD
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 34.6 bits (80), Expect = 6e-04
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAHD 139
+P+ C C++ F +K+ L H KR HD
Sbjct: 7 KPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 34.3 bits (79), Expect = 8e-04
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLHN 312
C C K F ++ L H KR H+
Sbjct: 10 ACSHCDKTFRQKQLLDMHFKRYHD 33
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 45.4 bits (108), Expect = 1e-07
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHARE 68
+P+SC C K F R L RH++ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 45.4 bits (108), Expect = 1e-07
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHARE 176
+P+SC C K F R L RH++ H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 31.1 bits (71), Expect = 0.012
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
CD C K F R L+RH K+ H
Sbjct: 5 SCDHPGCDKAFVRNHDLIRH-KKSH 28
Score = 30.8 bits (70), Expect = 0.014
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAH 30
RP+ CD C++ FVR L+RH K++H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRH-KKSH 28
Score = 30.8 bits (70), Expect = 0.014
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAH 138
RP+ CD C++ FVR L+RH K++H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRH-KKSH 28
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 44.6 bits (106), Expect = 2e-07
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQ-IHAREL 69
KP+ C +C FT+ ++ H H +
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 44.6 bits (106), Expect = 2e-07
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQ-IHAREL 177
KP+ C +C FT+ ++ H H +
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 37.3 bits (87), Expect = 7e-05
Identities = 5/23 (21%), Positives = 12/23 (52%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
+C +C F++ + H+ + H
Sbjct: 10 ECYICHARFTQSGTMKMHILQKH 32
Score = 36.9 bits (86), Expect = 1e-04
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
+P++C +C+ F + + H + H
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKH 32
Score = 36.9 bits (86), Expect = 1e-04
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
+P++C +C+ F + + H + H
Sbjct: 7 KPYECYICHARFTQSGTMKMHILQKH 32
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 35
Score = 44.4 bits (105), Expect = 2e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHAREL 69
+PF C +C FT + + RH ++H L
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDTL 34
Score = 44.4 bits (105), Expect = 2e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHAREL 177
+PF C +C FT + + RH ++H L
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDTL 34
Score = 29.0 bits (65), Expect = 0.064
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRK 27
RPF C +C F K + RH K
Sbjct: 6 RPFVCRICLSAFTTKANCARHLK 28
Score = 29.0 bits (65), Expect = 0.064
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRK 135
RPF C +C F K + RH K
Sbjct: 6 RPFVCRICLSAFTTKANCARHLK 28
Score = 27.8 bits (62), Expect = 0.17
Identities = 6/23 (26%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C +C F+ +++ RH ++H
Sbjct: 9 VCRICLSAFTTKANCARH-LKVH 30
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 44.2 bits (105), Expect = 2e-07
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHARE 68
KP C+ C K+++R E+L+ H + H E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 44.2 bits (105), Expect = 2e-07
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHARE 176
KP C+ C K+++R E+L+ H + H E
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 30.0 bits (68), Expect = 0.026
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
KC C+K +SR +L H R H
Sbjct: 4 KCTFEGCRKSYSRLENLKTH-LRSH 27
Score = 29.2 bits (66), Expect = 0.053
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAH 30
+P +C C + + R E+L H R+H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTH-LRSH 27
Score = 29.2 bits (66), Expect = 0.053
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAH 138
+P +C C + + R E+L H R+H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTH-LRSH 27
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 44.2 bits (105), Expect = 3e-07
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHARE 68
+PF C+ CGK FTR + L+RH++ H E
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 44.2 bits (105), Expect = 3e-07
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHARE 176
+PF C+ CGK FTR + L+RH++ H E
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 30.0 bits (68), Expect = 0.029
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAH 30
RPF C C + F R + L RH KR H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRH-KRTH 27
Score = 30.0 bits (68), Expect = 0.029
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAH 138
RPF C C + F R + L RH KR H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRH-KRTH 27
Score = 30.0 bits (68), Expect = 0.030
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
C C K F+R L RH KR H
Sbjct: 4 MCTWSYCGKRFTRSDELQRH-KRTH 27
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 43.8 bits (104), Expect = 3e-07
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIH 65
+P++C V C + F+R L RH +IH
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 43.8 bits (104), Expect = 3e-07
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIH 173
+P++C V C + F+R L RH +IH
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 30.8 bits (70), Expect = 0.016
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
C V C + FSR + L RH R+H
Sbjct: 4 ACPVESCDRRFSRSADLTRH-IRIH 27
Score = 29.6 bits (67), Expect = 0.040
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAH 30
RP+ C V C++ F R L RH R H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRH-IRIH 27
Score = 29.6 bits (67), Expect = 0.040
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAH 138
RP+ C V C++ F R L RH R H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRH-IRIH 27
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 43.5 bits (103), Expect = 4e-07
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHARE 68
KPF C+ CGK F+ +LR H +IH +
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 43.5 bits (103), Expect = 4e-07
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHARE 176
KPF C+ CGK F+ +LR H +IH +
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 28.1 bits (63), Expect = 0.11
Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
+C C K FS +L H R+H
Sbjct: 4 QCTFEGCGKRFSLDFNLRTH-VRIH 27
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 43.8 bits (104), Expect = 4e-07
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 40 AKPFSCSVCGKTFTRREHLRRHQQ-IHARE 68
KP+ C CGK F+R +HL H + +H E
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32
Score = 43.8 bits (104), Expect = 4e-07
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 148 AKPFSCSVCGKTFTRREHLRRHQQ-IHARE 176
KP+ C CGK F+R +HL H + +H E
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32
Score = 40.7 bits (96), Expect = 5e-06
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 3 VVRPFQCDVCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSCSV 47
V +P+ C C +GF R +HL H K+ H +P C V
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVH-------TSERPHKCQV 39
Score = 40.7 bits (96), Expect = 5e-06
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 111 VVRPFQCDVCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSCSV 155
V +P+ C C +GF R +HL H K+ H +P C V
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVH-------TSERPHKCQV 39
Score = 38.1 bits (89), Expect = 4e-05
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C C K FSR HL H+K++H
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVH 29
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 42.0 bits (99), Expect = 1e-06
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHA 66
+P+ C C K F + +L+ H HA
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 42.0 bits (99), Expect = 1e-06
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHA 174
+P+ C C K F + +L+ H HA
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 30.0 bits (68), Expect = 0.026
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAH 30
RP+ C CN+ F + +L H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHI-LTH 27
Score = 30.0 bits (68), Expect = 0.026
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAH 138
RP+ C CN+ F + +L H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHI-LTH 27
Score = 28.5 bits (64), Expect = 0.080
Identities = 7/25 (28%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLH 311
C C K F++ ++L H+ H
Sbjct: 4 VCPFDGCNKKFAQSTNLKSHI-LTH 27
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 41.6 bits (98), Expect = 2e-06
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIH 65
KPF C C ++F+R +HL H++ H
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 41.6 bits (98), Expect = 2e-06
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIH 173
KPF C C ++F+R +HL H++ H
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.1 bits (68), Expect = 0.028
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
+C C + FSR HL H ++ H
Sbjct: 13 QCPDCDRSFSRSDHLALH-RKRH 34
Score = 29.3 bits (66), Expect = 0.046
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRK 27
+PFQC C++ F R +HL HRK
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRK 32
Score = 29.3 bits (66), Expect = 0.046
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRK 135
+PFQC C++ F R +HL HRK
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRK 32
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 38.9 bits (91), Expect = 2e-05
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 43 FSCS--VCGKTFTRREHLRRHQQIHARE 68
FSC CGK+F ++HL+ H ++H+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDT 29
Score = 38.9 bits (91), Expect = 2e-05
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 151 FSCS--VCGKTFTRREHLRRHQQIHARE 176
FSC CGK+F ++HL+ H ++H+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDT 29
Score = 30.1 bits (68), Expect = 0.028
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C K F+ + HL H +LH
Sbjct: 5 PEPACGKSFNFKKHLKEH-MKLH 26
Score = 26.6 bits (59), Expect = 0.45
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 10/41 (24%)
Query: 7 FQCD--VCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSC 45
F C C + F K+HL H + H ++ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEH-MKLH-------SDTRDYIC 34
Score = 26.6 bits (59), Expect = 0.45
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 10/41 (24%)
Query: 115 FQCD--VCNQGFVRKEHLVRHRKRAHDLDPPEGAEAKPFSC 153
F C C + F K+HL H + H ++ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEH-MKLH-------SDTRDYIC 34
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 39.0 bits (91), Expect = 2e-05
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
+ + C CGK+F+ L +H++ H E
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 39.0 bits (91), Expect = 2e-05
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
+ + C CGK+F+ L +H++ H E
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 28.6 bits (64), Expect = 0.10
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRK 27
R ++CD C + F L +HR+
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRR 33
Score = 28.6 bits (64), Expect = 0.10
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRK 135
R ++CD C + F L +HR+
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRR 33
Score = 26.7 bits (59), Expect = 0.42
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
KCD C K FS S L +H +R H
Sbjct: 14 KCDECGKSFSHSSDLSKH-RRTH 35
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 37.5 bits (87), Expect = 5e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHAR 67
KPF+C +CG+ F R + +RH +IH R
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHLR 28
Score = 37.5 bits (87), Expect = 5e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHAR 175
KPF+C +CG+ F R + +RH +IH R
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHLR 28
Score = 29.0 bits (65), Expect = 0.063
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRK 27
+PF CD+C + F R + RH K
Sbjct: 2 KPFACDICGRKFARSDERKRHTK 24
Score = 29.0 bits (65), Expect = 0.063
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRK 135
+PF CD+C + F R + RH K
Sbjct: 2 KPFACDICGRKFARSDERKRHTK 24
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 35.6 bits (82), Expect = 3e-04
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 42 PFSCSVCGKTFTRREHLRRHQQ-IHA 66
P+ C +C + FTRR+ L RH Q IH+
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHS 26
Score = 35.6 bits (82), Expect = 3e-04
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 150 PFSCSVCGKTFTRREHLRRHQQ-IHA 174
P+ C +C + FTRR+ L RH Q IH+
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHS 26
Score = 32.1 bits (73), Expect = 0.004
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 290 CDVCKKVFSRRSHLLRHLKRLHN 312
C +C + F+RR L+RH +++H+
Sbjct: 4 CGLCNRAFTRRDLLIRHAQKIHS 26
Score = 31.3 bits (71), Expect = 0.009
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 6 PFQCDVCNQGFVRKEHLVRHRKRAH 30
P+ C +CN+ F R++ L+RH ++ H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIH 25
Score = 31.3 bits (71), Expect = 0.009
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 114 PFQCDVCNQGFVRKEHLVRHRKRAH 138
P+ C +CN+ F R++ L+RH ++ H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIH 25
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 35.3 bits (81), Expect = 4e-04
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 11/54 (20%)
Query: 17 VRKEHLVRHRKRAHDLDPPEGAEAKPFSCSVC--GKTFTRREHLRRHQQIHARE 68
+ + + ++ K D K F C KTF RR ++R H Q H +
Sbjct: 2 LPRGSIDKYVKEMPD---------KTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 35.3 bits (81), Expect = 4e-04
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 11/54 (20%)
Query: 125 VRKEHLVRHRKRAHDLDPPEGAEAKPFSCSVC--GKTFTRREHLRRHQQIHARE 176
+ + + ++ K D K F C KTF RR ++R H Q H +
Sbjct: 2 LPRGSIDKYVKEMPD---------KTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 33.3 bits (76), Expect = 0.002
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 5 RPFQCDV--CNQGFVRKEHLVRHRKRAHDL 32
+PF C C Q F ++HL H+ + H++
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHK-HEM 33
Score = 33.3 bits (76), Expect = 0.002
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Query: 113 RPFQCDV--CNQGFVRKEHLVRHRKRAHDL 140
+PF C C Q F ++HL H+ + H++
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHK-HEM 33
Score = 30.2 bits (68), Expect = 0.027
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIH 65
KPF C+ CG+ FT +HL H+ H
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHKH 31
Score = 30.2 bits (68), Expect = 0.027
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIH 173
KPF C+ CG+ FT +HL H+ H
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 32.8 bits (74), Expect = 0.003
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 43 FSCSVCGKTFTRREHLRRH 61
F CS CGKTFTRR + RH
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
Score = 32.8 bits (74), Expect = 0.003
Identities = 13/19 (68%), Positives = 14/19 (73%)
Query: 151 FSCSVCGKTFTRREHLRRH 169
F CS CGKTFTRR + RH
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
Score = 25.1 bits (54), Expect = 2.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 290 CDVCKKVFSRRSHLLRH 306
C C K F+RR+ + RH
Sbjct: 7 CSKCGKTFTRRNTMARH 23
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 31.1 bits (70), Expect = 0.009
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 45 CSVCGKTFTRREHLRRHQQIHARE 68
C+ CGK F L+RHQ +H E
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 31.1 bits (70), Expect = 0.009
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 153 CSVCGKTFTRREHLRRHQQIHARE 176
C+ CGK F L+RHQ +H E
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 31.3 bits (70), Expect = 0.014
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 41 KPFSCSVCGKTFTRREHLRRH-----QQIHARELLQSSMDM 76
KP+ C++C K F R+ RH + A + Q++ +
Sbjct: 4 KPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEA 44
Score = 31.3 bits (70), Expect = 0.014
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Query: 149 KPFSCSVCGKTFTRREHLRRH-----QQIHARELLQSSMDM 184
KP+ C++C K F R+ RH + A + Q++ +
Sbjct: 4 KPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEA 44
Score = 25.5 bits (55), Expect = 1.6
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 4 VRPFQCDVCNQGFVRKEHLVRHR 26
++P++C++C + F+ ++ RH
Sbjct: 3 IKPYECNICAKRFMWRDSFHRHV 25
Score = 25.5 bits (55), Expect = 1.6
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 112 VRPFQCDVCNQGFVRKEHLVRHR 134
++P++C++C + F+ ++ RH
Sbjct: 3 IKPYECNICAKRFMWRDSFHRHV 25
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 30.1 bits (67), Expect = 0.023
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 43 FSCSVCGKTFTRREHLRRHQQIHARE 68
F+CSVC +TF RR LR H H E
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 30.1 bits (67), Expect = 0.023
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 151 FSCSVCGKTFTRREHLRRHQQIHARE 176
F+CSVC +TF RR LR H H E
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 23.5 bits (50), Expect = 6.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 290 CDVCKKVFSRRSHLLRHL 307
C VC++ F RR L H+
Sbjct: 7 CSVCQETFRRRMELRLHM 24
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 30.7 bits (69), Expect = 0.026
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 39 EAKPFSCSVCGKTFTRREHLRRHQQIHARELLQ 71
EA C +CGK FT LR+H+ H LQ
Sbjct: 3 EAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ 35
Score = 30.7 bits (69), Expect = 0.026
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 147 EAKPFSCSVCGKTFTRREHLRRHQQIHARELLQ 179
EA C +CGK FT LR+H+ H LQ
Sbjct: 3 EAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ 35
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.9 bits (64), Expect = 0.073
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 42 PFSCSVCGKTFTRREHLRRHQQIH 65
P C VCGK F+R++ L+ H + H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 28.9 bits (64), Expect = 0.073
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 150 PFSCSVCGKTFTRREHLRRHQQIH 173
P C VCGK F+R++ L+ H + H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 26.2 bits (57), Expect = 0.54
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 289 KCDVCKKVFSRRSHLLRHLK 308
KC+VC K FSR+ L H++
Sbjct: 3 KCEVCGKCFSRKDKLKTHMR 22
Score = 25.0 bits (54), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 6 PFQCDVCNQGFVRKEHLVRHRK 27
P +C+VC + F RK+ L H +
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMR 22
Score = 25.0 bits (54), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 114 PFQCDVCNQGFVRKEHLVRHRK 135
P +C+VC + F RK+ L H +
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMR 22
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 28.9 bits (64), Expect = 0.084
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAHD 31
+P+ C VC F RK+ + H R+HD
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYH-VRSHD 27
Score = 28.9 bits (64), Expect = 0.084
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAHD 139
+P+ C VC F RK+ + H R+HD
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYH-VRSHD 27
Score = 28.1 bits (62), Expect = 0.15
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIH 65
KP+SC VCG F R++ + H + H
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 28.1 bits (62), Expect = 0.15
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIH 173
KP+SC VCG F R++ + H + H
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSH 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 28.5 bits (63), Expect = 0.11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
K +C +CGK F HL RH+ H+ E
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGE 31
Score = 28.5 bits (63), Expect = 0.11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
K +C +CGK F HL RH+ H+ E
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGE 31
Score = 23.1 bits (49), Expect = 8.1
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 290 CDVCKKVFSRRSHLLRHLKRLHNIDPPPSS 319
C++C K+F HL RH +L + P S
Sbjct: 8 CEICGKIFRDVYHLNRH--KLSHSGEKPYS 35
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 28.1 bits (62), Expect = 0.12
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 6 PFQCDVCNQGFVRKEHLVRHRKR 28
PF+C C + + RKE+L+ H R
Sbjct: 1 PFECPKCGKCYFRKENLLEHEAR 23
Score = 28.1 bits (62), Expect = 0.12
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 114 PFQCDVCNQGFVRKEHLVRHRKR 136
PF+C C + + RKE+L+ H R
Sbjct: 1 PFECPKCGKCYFRKENLLEHEAR 23
Score = 28.1 bits (62), Expect = 0.12
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 42 PFSCSVCGKTFTRREHLRRHQ 62
PF C CGK + R+E+L H+
Sbjct: 1 PFECPKCGKCYFRKENLLEHE 21
Score = 28.1 bits (62), Expect = 0.12
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 150 PFSCSVCGKTFTRREHLRRHQ 170
PF C CGK + R+E+L H+
Sbjct: 1 PFECPKCGKCYFRKENLLEHE 21
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 27.8 bits (61), Expect = 0.17
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 43 FSCSVCGKTFTRREHLRRHQQIH 65
+ C +C ++F + L RHQ++H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 27.8 bits (61), Expect = 0.17
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 151 FSCSVCGKTFTRREHLRRHQQIH 173
+ C +C ++F + L RHQ++H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 24.3 bits (52), Expect = 2.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 7 FQCDVCNQGFVRKEHLVRHRK 27
++C +C + FV K L RH++
Sbjct: 1 YKCGLCERSFVEKSALSRHQR 21
Score = 24.3 bits (52), Expect = 2.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 115 FQCDVCNQGFVRKEHLVRHRK 135
++C +C + FV K L RH++
Sbjct: 1 YKCGLCERSFVEKSALSRHQR 21
Score = 23.2 bits (49), Expect = 7.4
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
KC +C++ F +S L RH +R+H
Sbjct: 2 KCGLCERSFVEKSALSRH-QRVH 23
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 27.3 bits (60), Expect = 0.22
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 5 RPFQCDVCNQGFVRKEHLVRHRKRAH 30
RPF+C+ C+ + +L +H K+ H
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFH 26
Score = 27.3 bits (60), Expect = 0.22
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 113 RPFQCDVCNQGFVRKEHLVRHRKRAH 138
RPF+C+ C+ + +L +H K+ H
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFH 26
Score = 23.8 bits (51), Expect = 4.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
KC+ C + S+L +H+K+ H
Sbjct: 4 KCNYCSFDTKQPSNLSKHMKKFH 26
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 26.6 bits (59), Expect = 0.43
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHARE 68
+ ++CS C + F + L H +H R+
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRD 31
Score = 26.6 bits (59), Expect = 0.43
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHARE 176
+ ++CS C + F + L H +H R+
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRD 31
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 25.8 bits (56), Expect = 0.77
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIHARE 68
KPF C C K FT HL RH H E
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 25.8 bits (56), Expect = 0.77
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIHARE 176
KPF C C K FT HL RH H E
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 25.4 bits (55), Expect = 1.4
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 5 RPFQC--DVCNQGFVRKEHLVRH 25
+PF C + C +GF HL RH
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRH 23
Score = 25.4 bits (55), Expect = 1.4
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query: 113 RPFQC--DVCNQGFVRKEHLVRH 133
+PF C + C +GF HL RH
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRH 23
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 25.4 bits (55), Expect = 1.2
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 289 KCDV--CKKVFSRRSHLLRHLKRLHNI 313
CD C F+ ++++ +H R HNI
Sbjct: 4 TCDSDGCDLRFTTKANMKKHFNRFHNI 30
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 26
Score = 25.2 bits (54), Expect = 1.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 6 PFQCDVCNQGFVRKEHLVRHRKRAH 30
P++C C+Q F++K+ L H + H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 25.2 bits (54), Expect = 1.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 114 PFQCDVCNQGFVRKEHLVRHRKRAH 138
P++C C+Q F++K+ L H + H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
Score = 22.8 bits (48), Expect = 9.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 42 PFSCSVCGKTFTRREHLRRH 61
P+ CS C + F +++ L+ H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSH 21
Score = 22.8 bits (48), Expect = 9.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 150 PFSCSVCGKTFTRREHLRRH 169
P+ CS C + F +++ L+ H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSH 21
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.8 bits (54), Expect = 1.9
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 41 KPFSCSV--CGKTFTRREHLRRHQQIH 65
KP+ C + C K +T LR+H +
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
Score = 24.8 bits (54), Expect = 1.9
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 149 KPFSCSV--CGKTFTRREHLRRHQQIH 173
KP+ C + C K +T LR+H +
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.5 bits (53), Expect = 2.1
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 6 PFQCDVCNQGFVRKEHLVRHRK-RAH 30
P+ C CN F K +L +H K +AH
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKAH 26
Score = 24.5 bits (53), Expect = 2.1
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 114 PFQCDVCNQGFVRKEHLVRHRK-RAH 138
P+ C CN F K +L +H K +AH
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKAH 26
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 24.6 bits (53), Expect = 2.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 290 CDVCKKVFSRRSHLLRHLKRLH 311
C C K F+R+ ++ H+K +H
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIH 25
Score = 24.2 bits (52), Expect = 2.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 43 FSCSVCGKTFTRREHLRRHQQI 64
+ C C K FTR++++ H +I
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
Score = 24.2 bits (52), Expect = 2.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 151 FSCSVCGKTFTRREHLRRHQQI 172
+ C C K FTR++++ H +I
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
Score = 23.8 bits (51), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 7 FQCDVCNQGFVRKEHLVRHRKRAH 30
+ C C + F RK+++ H K H
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
Score = 23.8 bits (51), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 115 FQCDVCNQGFVRKEHLVRHRKRAH 138
+ C C + F RK+++ H K H
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 27.1 bits (60), Expect = 2.9
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 290 CDVCKKVFSRRSHLLRHLKRLHNIDPP 316
D + F + R+ K+ PP
Sbjct: 37 DDFTLQYFGSKKQYERYRKKCTLRHPP 63
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 26.7 bits (59), Expect = 3.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 290 CDVCKKVFSRRSHLLRHLKRLHNIDPP 316
C+ C K R+ L +H+K+ PP
Sbjct: 34 CEFCLKYMKSRTILQQHMKKCGWFHPP 60
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 23.9 bits (51), Expect = 4.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 45 CSVCGKTFTRREHLRRHQQIHARE 68
C C K F + +L+ H + H E
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGE 26
Score = 23.9 bits (51), Expect = 4.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 153 CSVCGKTFTRREHLRRHQQIHARE 176
C C K F + +L+ H + H E
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGE 26
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 23.5 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 42 PFSCSV--CGKTFTRREHLRRHQQIHA 66
P+ C C K F+ L+RH+++HA
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVHA 29
Score = 23.5 bits (50), Expect = 5.3
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 150 PFSCSV--CGKTFTRREHLRRHQQIHA 174
P+ C C K F+ L+RH+++HA
Sbjct: 3 PYECPHEGCDKRFSLPSRLKRHEKVHA 29
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 25.6 bits (56), Expect = 5.8
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLHNIDPPPSSRNKQVPTYYLLKLL 333
C C ++F+ H K H + + Y +KL+
Sbjct: 17 PCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLI 61
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.5 bits (50), Expect = 6.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 289 KCDVCKKVFSRRSHLLRHLKRLH 311
C C V +R+S L HL++ H
Sbjct: 4 HCPHCDTVIARKSDLGVHLRKQH 26
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.2 bits (49), Expect = 7.0
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 41 KPFSCSVCGKTFTRREHLRRHQQIHA 66
KP+ C C L +H +IH+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 23.2 bits (49), Expect = 7.0
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 149 KPFSCSVCGKTFTRREHLRRHQQIHA 174
KP+ C C L +H +IH+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.415
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,358,872
Number of extensions: 65759
Number of successful extensions: 466
Number of sequences better than 10.0: 1
Number of HSP's gapped: 458
Number of HSP's successfully gapped: 184
Length of query: 348
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 262
Effective length of database: 1,226,816
Effective search space: 321425792
Effective search space used: 321425792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.4 bits)