BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy407
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B6RSP1|PKHA7_DANRE Pleckstrin homology domain-containing family A member 7 OS=Danio
rerio GN=plekha7 PE=2 SV=2
Length = 1197
Score = 82.8 bits (203), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
EE +LGSI LPSY I+P +D + RK++FKAEH MRTYYF+ADT+E M W+ A++ A
Sbjct: 196 EESVLGSIPLPSYTIAPVGPEDHISRKYAFKAEHTGMRTYYFSADTQEDMNGWVRAMNQA 255
Query: 104 SILQNSS 110
+++Q +
Sbjct: 256 ALMQTHT 262
>sp|Q9HAU0|PKHA5_HUMAN Pleckstrin homology domain-containing family A member 5 OS=Homo
sapiens GN=PLEKHA5 PE=1 SV=1
Length = 1116
Score = 75.9 bits (185), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 51/74 (68%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
+EE +LGSILLPS++I+ +S+D + RK++FKA H NMRTYYF DT + M WM A+
Sbjct: 206 KEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLD 265
Query: 103 ASILQNSSTGWEDR 116
A+++Q D+
Sbjct: 266 AALVQTEPVKRVDK 279
>sp|Q3UIL6|PKHA7_MOUSE Pleckstrin homology domain-containing family A member 7 OS=Mus
musculus GN=Plekha7 PE=1 SV=2
Length = 1118
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 20/87 (22%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFKA-------------------EHANMRTYY 84
EE +LGSI LPSY ISP + +D++ RK+SFKA EH+ MRTYY
Sbjct: 201 EEAVLGSIPLPSYVISPVAPEDRISRKYSFKAVHTGMRALIYSTTTAGSQMEHSGMRTYY 260
Query: 85 FAADTRESMIQWMNALSLAS-ILQNSS 110
F+ADT E M W+ A++ A+ +L SS
Sbjct: 261 FSADTLEDMNAWVRAMNQAAQVLSRSS 287
>sp|Q6IQ23|PKHA7_HUMAN Pleckstrin homology domain-containing family A member 7 OS=Homo
sapiens GN=PLEKHA7 PE=1 SV=2
Length = 1121
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 20/87 (22%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFK-------------------AEHANMRTYY 84
EE +LGSI LPSY ISP + +D++ RK+SFK AE + MRTYY
Sbjct: 202 EEAVLGSIPLPSYVISPVAPEDRISRKYSFKAVHTGMRALIYNSSTAGSQAEQSGMRTYY 261
Query: 85 FAADTRESMIQWMNALSLAS-ILQNSS 110
F+ADT+E M W+ A++ A+ +L SS
Sbjct: 262 FSADTQEDMNAWVRAMNQAAQVLSRSS 288
>sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing family A member 4 OS=Homo
sapiens GN=PLEKHA4 PE=1 SV=2
Length = 779
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 40/69 (57%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
EE +LGS+LLPSY I P R+F+F AEH MRTY AADT E + W+ AL A
Sbjct: 92 EESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 151
Query: 104 SILQNSSTG 112
S + G
Sbjct: 152 SRAEGDDYG 160
>sp|Q8VC98|PKHA4_MOUSE Pleckstrin homology domain-containing family A member 4 OS=Mus
musculus GN=Plekha4 PE=2 SV=1
Length = 588
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 40/69 (57%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
EE +LGS+LLPSY + P R+F+F AEH MRTY AADT E + W+ AL A
Sbjct: 92 EESVLGSVLLPSYSVRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRA 151
Query: 104 SILQNSSTG 112
S + G
Sbjct: 152 SRAEGEDCG 160
>sp|P60669|PKHA4_RAT Pleckstrin homology domain-containing family A member 4 OS=Rattus
norvegicus GN=Plekha4 PE=2 SV=1
Length = 779
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 40/69 (57%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
EE +LGS+LLPSY + P R+F+F AEH MRTY AADT E + W+ AL A
Sbjct: 92 EESVLGSVLLPSYSVRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGKA 151
Query: 104 SILQNSSTG 112
S + G
Sbjct: 152 SRAEGEDCG 160
>sp|Q9Y2H5|PKHA6_HUMAN Pleckstrin homology domain-containing family A member 6 OS=Homo
sapiens GN=PLEKHA6 PE=1 SV=4
Length = 1048
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
+EE +LGSI L S++++ D + RK +FKAEHA +RTY+F+A++ E W+ A+
Sbjct: 96 KEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGE 155
Query: 103 ASILQ 107
A+ +Q
Sbjct: 156 AARVQ 160
>sp|Q7TQG1|PKHA6_MOUSE Pleckstrin homology domain-containing family A member 6 OS=Mus
musculus GN=Plekha6 PE=1 SV=1
Length = 1173
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
++E +LGSI L S++++ D + RK +FKAEHA +RTY+F+A++ E W+ A+
Sbjct: 96 KQESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGE 155
Query: 103 ASILQ 107
A+ +Q
Sbjct: 156 AARVQ 160
>sp|Q80YA9|CNKR2_MOUSE Connector enhancer of kinase suppressor of ras 2 OS=Mus musculus
GN=Cnksr2 PE=1 SV=1
Length = 1032
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
E+EK G I LP +KI S + +K++FKA H ++++YFAA+ + M +W+N +++
Sbjct: 610 EDEKAEGFISLPEFKIDRAS---ECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINM 666
Query: 103 ASILQNSSTGWEDRRLNNEDND 124
+ G+ +R ++ D
Sbjct: 667 L------TAGYAERERIKQEQD 682
>sp|Q9Z1T4|CNKR2_RAT Connector enhancer of kinase suppressor of ras 2 OS=Rattus
norvegicus GN=Cnksr2 PE=1 SV=1
Length = 1032
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
E+EK G I LP +KI S + +K++FKA H ++++YFAA+ + M +W+N +++
Sbjct: 610 EDEKAEGFISLPEFKIDRAS---ECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINM 666
Query: 103 ASILQNSSTGWEDRRLNNEDND 124
+ G+ +R ++ D
Sbjct: 667 L------TAGYAERERIKQEQD 682
>sp|Q8WXI2|CNKR2_HUMAN Connector enhancer of kinase suppressor of ras 2 OS=Homo sapiens
GN=CNKSR2 PE=1 SV=1
Length = 1034
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
E+EK G I LP +KI S + +K++FKA H ++++YFAA+ + M +W+N +++
Sbjct: 610 EDEKAEGFISLPEFKIDRAS---ECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINM 666
Query: 103 ASILQNSSTGWEDRRLNNEDND 124
+ G+ +R ++ D
Sbjct: 667 L------TAGYAERERIKQEQD 682
>sp|Q8WWN9|ICEF1_HUMAN Interactor protein for cytohesin exchange factors 1 OS=Homo sapiens
GN=IPCEF1 PE=1 SV=1
Length = 437
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 45 EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
EK G + LP + + S + +K +FK H ++T+YFAA+ + M W+N L A
Sbjct: 83 EKADGFVNLPDFTVERAS---ECKKKHAFKISHPQIKTFYFAAENVQEMNVWLNKLGSAV 139
Query: 105 ILQNSSTGWEDRRLNNEDND 124
I Q S+T E+ +E D
Sbjct: 140 IHQESTTKDEECYSESEQED 159
>sp|Q80VL0|ICEF1_RAT Interactor protein for cytohesin exchange factors 1 OS=Rattus
norvegicus GN=Ipcef1 PE=1 SV=1
Length = 406
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 45 EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
EK G + LP + + S + +K +FK H ++T+YFAA+ + M W+N L A
Sbjct: 55 EKADGFVNLPDFTVERAS---ECKKKNAFKINHPQIKTFYFAAENLQEMNMWLNKLGFAV 111
Query: 105 ILQNSSTGWEDRRLNNEDND 124
+ S+T E+ +E D
Sbjct: 112 THKESTTKDEECYSESEQED 131
>sp|Q8BUL6|PKHA1_MOUSE Pleckstrin homology domain-containing family A member 1 OS=Mus
musculus GN=Plekha1 PE=1 SV=1
Length = 383
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
E+E L L +K+ C D + R F+ + RT+Y AD+ E M W+ A+S
Sbjct: 227 LEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS-RTFYVQADSPEEMHSWIKAVS 285
Query: 102 LASILQ-----NSSTGWEDRRLNN 120
A + Q +SS+ + RRL+N
Sbjct: 286 GAIVAQRGPGRSSSSMRQARRLSN 309
>sp|Q5DU31|ICEF1_MOUSE Interactor protein for cytohesin exchange factors 1 OS=Mus musculus
GN=Ipcef1 PE=2 SV=2
Length = 406
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 69 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNNEDND 124
+K +FK H ++ +YFAA+ + M W+N L A Q S T E+ +E D
Sbjct: 76 KKNAFKINHPQIKAFYFAAENLQEMNVWLNKLGFAVTHQESITKDEECYSESEQED 131
>sp|Q9HB21|PKHA1_HUMAN Pleckstrin homology domain-containing family A member 1 OS=Homo
sapiens GN=PLEKHA1 PE=1 SV=2
Length = 404
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
E+E L L +K+ C D + R F+ + RT+Y AD+ E M W+ A+S
Sbjct: 227 LEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTS-RTFYVQADSPEEMHSWIKAVS 285
Query: 102 LASILQ 107
A + Q
Sbjct: 286 GAIVAQ 291
>sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1
Length = 359
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 11 NDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRK 70
+++ AST C ++ LLA M + +S EEEK+ +P Y SP + ++ ++
Sbjct: 214 SEDRASTECCLIWQLLA---MALNQMVSEGLIEEEKM-DKFNIPQYTPSPTEVEAEILKE 269
Query: 71 FSFKAEHANMRTYYFAADTRE 91
SF +H Y+++ T++
Sbjct: 270 GSFLIDHIEASEIYWSSCTKD 290
>sp|P39969|BOI2_YEAST Protein BOI2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BOI2 PE=1 SV=1
Length = 1040
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 81 RTYYFAADTRESMIQWMNALSLASI 105
RT+YFA D +E M WM AL +I
Sbjct: 863 RTHYFAVDNKEEMRGWMAALIKTTI 887
>sp|Q2WGN9|GAB4_HUMAN GRB2-associated-binding protein 4 OS=Homo sapiens GN=GAB4 PE=2 SV=1
Length = 574
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 81 RTYYFAADTRESMIQWMNAL-SLASILQNSSTGW 113
RT+Y A+TRE M +W+ ++ + Q STG+
Sbjct: 128 RTFYLVAETREDMNEWVQSICQICGFRQEESTGF 161
>sp|P50904|RASA1_RAT Ras GTPase-activating protein 1 OS=Rattus norvegicus GN=Rasa1 PE=3
SV=1
Length = 1038
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 73 FKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNN 120
F EH +YFA +T E WM L L+ SS G ++RL
Sbjct: 539 FSEEHY---IFYFAGETPEQAEDWMKGLQAFCSLRKSSPGTSNKRLRQ 583
>sp|Q196Z5|RIR1_IIV3 Ribonucleoside-diphosphate reductase large subunit OS=Invertebrate
iridescent virus 3 GN=IIV3-065R PE=3 SV=1
Length = 630
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 20 HNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79
HN Y LL H V P+ F ++ + S L P K+ PC + + +F+ KA
Sbjct: 176 HN-YKLLNLHNGVNVPD----SFMKKIWILSTLAPFVKMDPCPTTETLFK----KAVTTL 226
Query: 80 MRTYYFAADTRESMIQWMNALSLASILQN 108
+ YF AD R W+ +S A++ +
Sbjct: 227 KDSRYFGADDR-----WLGEVSFAALAEQ 250
>sp|Q8N264|RHG24_HUMAN Rho GTPase-activating protein 24 OS=Homo sapiens GN=ARHGAP24 PE=1
SV=2
Length = 748
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 12/68 (17%)
Query: 43 EEEKLLGSILLPSYKIS--PCSSDDKVFRKFSFKA--------EHANMRTYYFAADTRES 92
+E K LG+I LP K+S PC+ ++ KF F+ AN +Y A T+
Sbjct: 55 DETKPLGTIFLPGNKVSEHPCNEENP--GKFLFEVVPGGDRDRMTANHESYLLMASTQND 112
Query: 93 MIQWMNAL 100
M W+ ++
Sbjct: 113 MEDWVKSI 120
>sp|Q96BY6|DOC10_HUMAN Dedicator of cytokinesis protein 10 OS=Homo sapiens GN=DOCK10 PE=1
SV=3
Length = 2186
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 68 FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNNEDNDSGF 127
RK++F+ + ++ + AA+T M +W++ L+ ILQ S G R + E D G
Sbjct: 253 LRKYAFELKMNDLTYFVLAAETESDMDEWIHTLN--RILQISPEGPLQGRRSTELTDLGL 310
>sp|P20936|RASA1_HUMAN Ras GTPase-activating protein 1 OS=Homo sapiens GN=RASA1 PE=1 SV=1
Length = 1047
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 73 FKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNN 120
F EH +YFA +T E WM L L+ SS G ++RL
Sbjct: 548 FSEEHY---IFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQ 592
>sp|P09851|RASA1_BOVIN Ras GTPase-activating protein 1 OS=Bos taurus GN=RASA1 PE=1 SV=1
Length = 1044
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 73 FKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNN 120
F EH +YFA +T E WM L L+ SS G ++RL
Sbjct: 545 FSEEHY---IFYFAGETPEQAEDWMKGLQAFCNLRKSSPGTSNKRLRQ 589
>sp|Q91VS8|FARP2_MOUSE FERM, RhoGEF and pleckstrin domain-containing protein 2 OS=Mus
musculus GN=Farp2 PE=1 SV=2
Length = 1065
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 48 LGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
L S+ L Y +S D + + + FK + + Y+F A+++ + +WM+ + AS
Sbjct: 971 LASLPLLGYSVSLPREADSIHKDYVFKLQFKS-HVYFFRAESKYTFERWMDVIKRAS 1026
>sp|P38041|BOB1_YEAST Protein BOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BOI1 PE=1 SV=1
Length = 980
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 20/82 (24%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFR---------KFSFKA-----------EHANMRTY 83
+EK G I + ++++ P S DD++ K+ FK R +
Sbjct: 814 DEKERGLIDITAHRVLPASDDDRLISLYAASLGKGKYCFKLVPPQPGSKKGLTFTEPRVH 873
Query: 84 YFAADTRESMIQWMNALSLASI 105
YFA + + M W++A+ A+I
Sbjct: 874 YFAVENKSEMKAWLSAIIKATI 895
>sp|P52734|FGD1_MOUSE FYVE, RhoGEF and PH domain-containing protein 1 OS=Mus musculus
GN=Fgd1 PE=1 SV=2
Length = 960
Score = 29.6 bits (65), Expect = 8.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 50 SILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
S+ L +++ P + ++ R+ FK +++ ++YF+ +T E +WM L A
Sbjct: 866 SLPLIGFEVGPPEAGERPDRRHVFKITQSHL-SWYFSPETEELQRRWMAVLGRA 918
>sp|P98174|FGD1_HUMAN FYVE, RhoGEF and PH domain-containing protein 1 OS=Homo sapiens
GN=FGD1 PE=1 SV=2
Length = 961
Score = 29.6 bits (65), Expect = 8.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 50 SILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
S+ L +++ P + ++ R+ FK +++ ++YF+ +T E +WM L A
Sbjct: 867 SLPLIGFEVGPPEAGERPDRRHVFKITQSHL-SWYFSPETEELQRRWMAVLGRA 919
>sp|A7ZEJ1|FLIW_CAMC1 Flagellar assembly factor FliW OS=Campylobacter concisus (strain
13826) GN=fliW PE=3 SV=1
Length = 127
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 31 MVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDK----VFRKFSFKAEHANMRTYYFA 86
M+FS + LGFE K + I L + + S DD+ + F+ ++ ++ +YY
Sbjct: 1 MIFSVKSPILGFEHIKTMELIELDKFFVKLASKDDETSFTMINPFALRSYEFDIPSYYEE 60
Query: 87 -ADTRE-SMIQWMNALSLASILQNSSTGWEDRRLNNEDN 123
D +E S ++ N + +A L+ S+ + + N DN
Sbjct: 61 LMDIKESSQLRIYNIIVVALPLEKSTVNFVAPIVCNMDN 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,543,871
Number of Sequences: 539616
Number of extensions: 2153230
Number of successful extensions: 4802
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4777
Number of HSP's gapped (non-prelim): 42
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)