Query psy407
Match_columns 160
No_of_seqs 172 out of 1081
Neff 6.8
Searched_HMMs 46136
Date Sat Aug 17 00:33:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy407.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/407hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01260 PH_CNK Connector enhan 99.9 2.2E-24 4.8E-29 151.3 11.7 94 2-103 1-96 (96)
2 cd01263 PH_anillin Anillin Ple 99.9 3.3E-23 7.2E-28 152.5 9.9 98 1-103 1-122 (122)
3 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 1.1E-22 2.4E-27 143.4 11.4 89 5-103 3-93 (95)
4 cd01252 PH_cytohesin Cytohesin 99.9 2E-21 4.4E-26 142.8 12.6 95 2-106 1-115 (125)
5 cd01233 Unc104 Unc-104 pleckst 99.9 1.5E-21 3.3E-26 138.6 10.8 94 3-104 4-98 (100)
6 cd01251 PH_centaurin_alpha Cen 99.9 3.1E-21 6.8E-26 137.9 11.6 83 16-104 13-100 (103)
7 cd01264 PH_melted Melted pleck 99.8 7.1E-21 1.5E-25 135.9 10.2 83 15-103 15-100 (101)
8 cd01237 Unc112 Unc-112 pleckst 99.8 7.1E-21 1.5E-25 136.4 9.8 87 13-106 14-105 (106)
9 cd01247 PH_GPBP Goodpasture an 99.8 1.7E-20 3.7E-25 131.5 11.1 82 11-102 7-90 (91)
10 cd01238 PH_Tec Tec pleckstrin 99.8 1.7E-20 3.7E-25 134.7 10.9 82 15-102 17-105 (106)
11 cd01235 PH_SETbf Set binding f 99.8 3.7E-20 8E-25 130.2 12.1 93 3-103 1-100 (101)
12 cd01236 PH_outspread Outspread 99.8 4.7E-20 1E-24 132.4 11.0 81 15-102 20-102 (104)
13 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 5.8E-20 1.3E-24 130.6 11.2 91 5-103 3-98 (98)
14 cd01245 PH_RasGAP_CG5898 RAS G 99.8 4.4E-20 9.6E-25 131.2 9.6 91 3-102 1-97 (98)
15 cd01257 PH_IRS Insulin recepto 99.8 1.2E-19 2.6E-24 129.6 11.1 84 4-102 5-100 (101)
16 cd01250 PH_centaurin Centaurin 99.8 1.9E-19 4.1E-24 124.2 11.4 90 5-103 3-94 (94)
17 PF00169 PH: PH domain; Inter 99.8 5.3E-19 1.2E-23 121.6 13.4 95 3-104 3-103 (104)
18 cd01266 PH_Gab Gab (Grb2-assoc 99.8 1.6E-19 3.4E-24 129.8 10.8 82 16-103 16-107 (108)
19 cd01246 PH_oxysterol_bp Oxyste 99.8 2.4E-19 5.2E-24 123.0 11.2 88 4-103 2-91 (91)
20 cd01253 PH_beta_spectrin Beta- 99.8 5.1E-18 1.1E-22 120.5 10.2 85 12-103 16-104 (104)
21 KOG0930|consensus 99.7 4.2E-17 9E-22 134.1 9.6 95 2-105 261-376 (395)
22 cd01230 PH_EFA6 EFA6 Pleckstri 99.7 2.2E-16 4.8E-21 115.5 10.6 83 16-105 23-112 (117)
23 cd01241 PH_Akt Akt pleckstrin 99.7 4.4E-16 9.6E-21 111.0 9.7 91 4-103 4-101 (102)
24 PF15409 PH_8: Pleckstrin homo 99.7 1.5E-15 3.3E-20 106.0 10.4 79 13-103 8-88 (89)
25 cd01254 PH_PLD Phospholipase D 99.6 1.2E-15 2.7E-20 111.9 9.9 80 18-103 32-121 (121)
26 smart00233 PH Pleckstrin homol 99.6 8.7E-15 1.9E-19 98.7 12.5 96 3-104 3-101 (102)
27 cd00900 PH-like Pleckstrin hom 99.5 1.5E-13 3.1E-18 92.6 11.7 93 4-103 2-99 (99)
28 cd00821 PH Pleckstrin homology 99.5 5.7E-14 1.2E-18 93.8 9.4 81 16-103 13-96 (96)
29 cd01256 PH_dynamin Dynamin ple 99.5 6.8E-14 1.5E-18 98.9 9.7 90 9-104 8-105 (110)
30 PF15410 PH_9: Pleckstrin homo 99.5 8.3E-14 1.8E-18 101.9 10.0 83 15-104 22-118 (119)
31 cd01219 PH_FGD FGD (faciogenit 99.5 2E-13 4.4E-18 97.1 10.9 83 13-104 12-99 (101)
32 cd01220 PH_CDEP Chondrocyte-de 99.5 6.9E-13 1.5E-17 94.4 11.5 89 5-104 6-97 (99)
33 KOG3640|consensus 99.5 5.8E-14 1.2E-18 129.3 6.3 100 2-106 991-1108(1116)
34 PF15413 PH_11: Pleckstrin hom 99.4 6.3E-12 1.4E-16 91.1 12.0 91 5-103 3-112 (112)
35 KOG3727|consensus 99.3 1.6E-13 3.5E-18 120.9 -3.9 109 17-136 377-487 (664)
36 cd01234 PH_CADPS CADPS (Ca2+-d 99.2 1.1E-11 2.3E-16 88.5 5.1 101 1-104 2-110 (117)
37 cd01259 PH_Apbb1ip Apbb1ip (Am 99.1 4E-10 8.7E-15 81.4 7.2 98 7-107 5-111 (114)
38 cd01218 PH_phafin2 Phafin2 Pl 99.0 4.6E-09 9.9E-14 75.4 11.4 89 5-105 8-99 (104)
39 cd01242 PH_ROK Rok (Rho- assoc 98.9 1.9E-08 4.2E-13 72.6 11.0 93 6-103 4-109 (112)
40 cd01249 PH_oligophrenin Oligop 98.9 3E-08 6.6E-13 71.0 9.9 91 5-101 3-102 (104)
41 cd01243 PH_MRCK MRCK (myotonic 98.8 1E-07 2.2E-12 69.8 11.0 91 8-103 8-118 (122)
42 cd01261 PH_SOS Son of Sevenles 98.8 1.6E-07 3.4E-12 68.3 10.8 91 5-104 8-109 (112)
43 KOG2059|consensus 98.7 3.2E-08 7E-13 89.8 6.9 83 17-107 584-667 (800)
44 KOG0521|consensus 98.7 9.9E-09 2.1E-13 95.4 3.2 86 13-106 285-370 (785)
45 KOG3531|consensus 98.7 6.6E-09 1.4E-13 95.6 1.6 83 16-104 937-1019(1036)
46 KOG1090|consensus 98.6 1.8E-08 4E-13 94.3 2.3 85 13-104 1644-1731(1732)
47 PF14593 PH_3: PH domain; PDB: 98.6 4.2E-07 9.2E-12 65.2 8.8 73 19-106 27-101 (104)
48 cd01239 PH_PKD Protein kinase 98.6 6.2E-07 1.3E-11 65.2 8.8 82 16-103 13-117 (117)
49 cd01224 PH_Collybistin Collybi 98.4 8.9E-06 1.9E-10 58.8 11.9 94 3-103 4-106 (109)
50 PTZ00267 NIMA-related protein 98.4 7.1E-07 1.5E-11 78.3 6.8 95 3-104 379-476 (478)
51 cd01258 PH_syntrophin Syntroph 98.4 2E-06 4.3E-11 62.2 7.2 83 15-102 15-107 (108)
52 KOG3751|consensus 98.3 1.7E-06 3.8E-11 76.6 8.0 95 5-106 321-426 (622)
53 cd01226 PH_exo84 Exocyst compl 98.3 1.2E-05 2.7E-10 57.3 9.7 75 23-104 24-98 (100)
54 cd01225 PH_Cool_Pix Cool (clon 98.2 7.5E-06 1.6E-10 59.2 7.7 80 17-103 26-108 (111)
55 KOG0932|consensus 98.2 1.1E-06 2.4E-11 78.6 3.8 86 15-107 528-620 (774)
56 PLN02866 phospholipase D 98.1 1.3E-05 2.8E-10 76.3 9.7 81 18-104 217-307 (1068)
57 KOG0690|consensus 98.0 2.5E-05 5.4E-10 66.9 8.6 86 14-105 26-117 (516)
58 PF12814 Mcp5_PH: Meiotic cell 98.0 0.00021 4.5E-09 52.5 11.6 91 7-103 15-120 (123)
59 cd01262 PH_PDK1 3-Phosphoinosi 98.0 6.2E-05 1.3E-09 52.5 7.9 79 10-104 7-88 (89)
60 KOG1117|consensus 97.9 3E-05 6.5E-10 72.3 7.6 97 3-104 494-601 (1186)
61 KOG1739|consensus 97.9 2.6E-05 5.7E-10 68.8 6.9 82 14-106 35-118 (611)
62 KOG4424|consensus 97.9 8.4E-06 1.8E-10 73.0 3.6 99 4-109 499-600 (623)
63 PLN00188 enhanced disease resi 97.8 0.00016 3.6E-09 66.6 10.0 98 5-107 8-112 (719)
64 KOG3543|consensus 97.8 4.6E-06 9.9E-11 75.7 -0.2 103 1-106 464-567 (1218)
65 cd01223 PH_Vav Vav pleckstrin 97.8 0.00017 3.7E-09 52.7 7.9 81 19-104 20-111 (116)
66 KOG0248|consensus 97.8 1.3E-05 2.7E-10 73.2 2.3 83 14-108 260-345 (936)
67 cd01222 PH_clg Clg (common-sit 97.8 0.00032 7E-09 49.7 8.9 76 20-104 17-95 (97)
68 cd01231 PH_Lnk LNK-family Plec 97.7 0.00014 3E-09 51.9 6.8 83 14-102 16-106 (107)
69 cd01221 PH_ephexin Ephexin Ple 97.7 0.00048 1E-08 51.0 9.5 93 5-102 7-120 (125)
70 PTZ00283 serine/threonine prot 97.6 0.00015 3.2E-09 64.3 6.5 37 68-104 453-489 (496)
71 cd01228 PH_BCR-related BCR (br 97.5 0.00038 8.3E-09 49.1 6.4 82 5-103 7-93 (96)
72 PF15406 PH_6: Pleckstrin homo 97.4 0.00051 1.1E-08 49.6 5.9 57 39-102 55-111 (112)
73 cd01240 PH_beta-ARK Beta adren 97.3 0.0004 8.6E-09 50.2 4.7 82 17-106 18-100 (116)
74 KOG1738|consensus 97.3 2.6E-05 5.6E-10 70.5 -2.4 57 2-63 563-620 (638)
75 cd01232 PH_TRIO Trio pleckstri 97.1 0.011 2.3E-07 43.1 10.4 93 5-104 9-112 (114)
76 KOG4807|consensus 97.0 4.3E-06 9.3E-11 72.2 -9.6 78 17-104 33-114 (593)
77 KOG1117|consensus 97.0 0.0028 6.1E-08 59.6 7.6 81 17-104 1049-1131(1186)
78 KOG3723|consensus 96.9 0.00039 8.4E-09 62.8 1.2 85 16-106 751-838 (851)
79 KOG2070|consensus 96.6 0.01 2.2E-07 53.0 7.7 77 19-102 325-404 (661)
80 KOG1737|consensus 96.5 0.0015 3.3E-08 61.2 2.5 84 9-104 83-168 (799)
81 KOG1451|consensus 96.4 0.0081 1.8E-07 54.6 6.1 95 5-103 269-366 (812)
82 KOG4424|consensus 95.6 0.036 7.9E-07 50.2 6.6 91 5-106 276-371 (623)
83 cd01227 PH_Dbs Dbs (DBL's big 95.5 0.32 7E-06 36.4 10.4 79 20-107 30-118 (133)
84 cd01248 PH_PLC Phospholipase C 95.5 0.15 3.3E-06 36.5 8.4 79 17-102 18-114 (115)
85 KOG3549|consensus 95.3 0.021 4.6E-07 49.2 4.1 88 13-105 294-387 (505)
86 PF15408 PH_7: Pleckstrin homo 95.2 0.0084 1.8E-07 41.8 0.9 79 19-103 12-96 (104)
87 KOG2996|consensus 95.1 0.035 7.7E-07 50.6 5.0 117 18-150 421-546 (865)
88 cd01255 PH_TIAM TIAM Pleckstri 94.5 0.37 8.1E-06 36.6 8.3 90 10-105 36-155 (160)
89 PF15411 PH_10: Pleckstrin hom 94.1 0.73 1.6E-05 33.6 9.0 75 17-100 19-116 (116)
90 PF15405 PH_5: Pleckstrin homo 93.9 0.11 2.5E-06 38.7 4.7 36 68-103 97-134 (135)
91 KOG0705|consensus 93.4 0.057 1.2E-06 49.2 2.6 35 71-105 446-480 (749)
92 KOG1264|consensus 92.8 0.2 4.4E-06 47.5 5.3 59 47-106 852-912 (1267)
93 PF15404 PH_4: Pleckstrin homo 92.5 0.71 1.5E-05 36.4 7.2 22 81-102 162-183 (185)
94 KOG0517|consensus 91.7 0.0033 7.2E-08 62.9 -7.9 88 10-104 2314-2409(2473)
95 KOG4407|consensus 91.3 0.017 3.7E-07 56.6 -3.5 82 16-104 946-1041(1973)
96 KOG3551|consensus 91.0 0.36 7.7E-06 42.3 4.5 97 3-104 294-401 (506)
97 KOG4236|consensus 90.1 0.38 8.2E-06 44.2 3.9 84 19-109 429-528 (888)
98 KOG0248|consensus 89.9 0.26 5.7E-06 45.9 2.8 80 14-106 270-350 (936)
99 KOG3523|consensus 89.3 0.64 1.4E-05 42.7 4.8 79 19-102 499-592 (695)
100 KOG4047|consensus 87.6 0.41 8.9E-06 42.3 2.4 99 5-106 12-119 (429)
101 KOG1170|consensus 86.0 0.031 6.7E-07 52.6 -5.6 79 17-105 16-95 (1099)
102 KOG3531|consensus 81.6 2.1 4.7E-05 40.8 4.3 76 20-104 765-844 (1036)
103 KOG1738|consensus 77.8 0.079 1.7E-06 48.5 -6.1 96 17-120 83-178 (638)
104 PF08458 PH_2: Plant pleckstri 76.4 8.2 0.00018 28.0 5.2 35 69-104 69-103 (110)
105 KOG3551|consensus 72.5 5.8 0.00012 35.0 4.2 57 47-105 214-272 (506)
106 PF04714 BCL_N: BCL7, N-termin 71.2 1.5 3.2E-05 27.4 0.2 17 17-33 28-44 (52)
107 KOG0592|consensus 70.2 14 0.00031 33.9 6.3 72 19-104 465-537 (604)
108 KOG3520|consensus 64.3 11 0.00025 37.2 4.7 58 47-108 666-725 (1167)
109 PF12480 DUF3699: Protein of u 56.1 43 0.00094 22.5 5.2 51 46-101 7-62 (77)
110 PF14844 PH_BEACH: PH domain a 51.3 54 0.0012 22.6 5.4 52 46-99 53-104 (106)
111 KOG4095|consensus 51.0 5.8 0.00013 30.3 0.3 18 16-33 28-45 (165)
112 PF06017 Myosin_TH1: Myosin ta 41.2 1.7E+02 0.0036 22.7 9.2 77 16-105 62-144 (199)
113 KOG3508|consensus 39.7 3.2 6.9E-05 40.0 -3.2 79 18-105 376-461 (932)
114 PF15277 Sec3-PIP2_bind: Exocy 39.1 1.3E+02 0.0027 20.7 5.9 50 50-104 38-88 (91)
115 KOG0689|consensus 37.2 50 0.0011 29.6 4.0 36 72-107 325-363 (448)
116 KOG4471|consensus 33.1 1E+02 0.0022 28.9 5.4 38 69-106 100-138 (717)
117 KOG1329|consensus 32.7 40 0.00087 32.6 2.8 81 17-106 191-271 (887)
118 PF10882 bPH_5: Bacterial PH d 28.3 99 0.0022 20.9 3.7 25 70-95 70-94 (100)
119 KOG2677|consensus 28.2 46 0.001 31.4 2.4 86 14-104 463-571 (922)
120 PHA01795 hypothetical protein 27.7 60 0.0013 27.3 2.8 21 13-33 116-136 (280)
121 KOG3037|consensus 25.6 4.3E+02 0.0093 22.8 7.5 51 49-100 63-118 (330)
122 cd01269 PLX Pollux (PLX) Phosp 24.3 1.1E+02 0.0024 22.7 3.4 24 81-104 102-125 (129)
123 PF08394 Arc_trans_TRASH: Arch 22.1 98 0.0021 18.0 2.2 20 68-90 10-29 (37)
124 COG4026 Uncharacterized protei 21.5 1.3E+02 0.0028 24.8 3.5 29 81-109 249-277 (290)
125 cd06409 PB1_MUG70 The MUG70 pr 20.0 1.6E+02 0.0035 20.2 3.3 32 71-102 1-32 (86)
No 1
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.92 E-value=2.2e-24 Score=151.31 Aligned_cols=94 Identities=24% Similarity=0.390 Sum_probs=81.4
Q ss_pred CccceEEEEecCCC--CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 2 DHVCFLIILNDNMA--STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 2 ~~~~~~~~~~~~~~--~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
|+.|.|..-....| .+.|++|||||++++|+| |+++.+..+.|.|+|.+++|..+.+. +++++|+|.+++
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~y-----yk~~~~~~~~~~I~L~~~~v~~~~~~---~k~~~F~I~~~~ 72 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYW-----YRSKQDEKAEGLIFLSGFTIESAKEV---KKKYAFKVCHPV 72 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEE-----ECCCCCCccceEEEccCCEEEEchhc---CCceEEEECCCC
Confidence 67777766544433 668999999999999999 99999999999999999998776442 578999999887
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
.++|+|+|+|++|+++||++|++|
T Consensus 73 ~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 73 YKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred CcEEEEEeCCHHHHHHHHHHHHhC
Confidence 799999999999999999999986
No 2
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.89 E-value=3.3e-23 Score=152.51 Aligned_cols=98 Identities=20% Similarity=0.251 Sum_probs=82.2
Q ss_pred CCccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeEEEecC--CCCccCceeeEEE
Q psy407 1 MDHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYKISPCS--SDDKVFRKFSFKA 75 (160)
Q Consensus 1 ~~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~~~--~~~~~~~~~~F~i 75 (160)
.||.|||.++.+.++.+.|+||||||++++|+| |+.+++ ..|+|.|+|.+|.+..+. +.+.+.|++.|.|
T Consensus 1 ~~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y-----~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i 75 (122)
T cd01263 1 VEYHGFLTMFEDTSGFGAWHRRWCALEGGEIKY-----WKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHL 75 (122)
T ss_pred CccceeEEEEeccCCCCCceEEEEEEeCCEEEE-----EcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEE
Confidence 479999999999999999999999999999999 887666 679999999999876653 3345689999998
Q ss_pred ee--CCc----------------e-EEEEEcCCHHHHHHHHHHHHHh
Q psy407 76 EH--ANM----------------R-TYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 76 ~~--~~~----------------r-~~~l~Aese~e~~~Wi~aL~~a 103 (160)
.. +.+ + -++|+|||.+|+++||+||+.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 76 DVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred EEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 53 221 1 2689999999999999999874
No 3
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.89 E-value=1.1e-22 Score=143.40 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=76.0
Q ss_pred ceEEEEecCCCCCCceEEEEEEeC--CeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 5 CFLIILNDNMASTLCHNVYLLLAT--HVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~--~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
|+|..+..++..+.|+||||||++ +.|+| |+++.+..|+|.|+|.++.+...+. .+++.|.|.++ .|+
T Consensus 3 GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Y-----yk~~~d~~p~G~I~L~~~~~~~~~~----~~~~~F~i~t~-~r~ 72 (95)
T cd01265 3 GYLHKIEGKGPLRGRRSRWFALDDRTCYLYY-----YKDSQDAKPLGRVDLSGAAFTYDPR----EEKGRFEIHSN-NEV 72 (95)
T ss_pred ccEEEecCCCCCcCceeEEEEEcCCCcEEEE-----ECCCCcccccceEECCccEEEcCCC----CCCCEEEEEcC-CcE
Confidence 667777766668999999999984 47998 9999999999999999987765433 23679999876 589
Q ss_pred EEEEcCCHHHHHHHHHHHHHh
Q psy407 83 YYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a 103 (160)
|+|+|+|++||++||++|+.+
T Consensus 73 y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 73 IALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EEEECCCHHHHHHHHHHHHhh
Confidence 999999999999999999986
No 4
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.87 E-value=2e-21 Score=142.84 Aligned_cols=95 Identities=15% Similarity=0.232 Sum_probs=80.6
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc-
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM- 80 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~- 80 (160)
|..|+|. +..+..+.|++|||||.+++|+| |+++++.++.|.|+|.+|.|..+... .++++|+|..++.
T Consensus 1 ~k~G~L~--K~~~~~~~WkkRwfvL~~~~L~y-----yk~~~~~~~~g~I~L~~~~v~~~~~~---~~~~~F~i~~~~~~ 70 (125)
T cd01252 1 DREGWLL--KQGGRVKTWKRRWFILTDNCLYY-----FEYTTDKEPRGIIPLENVSIREVEDP---SKPFCFELFSPSDK 70 (125)
T ss_pred CcEEEEE--EeCCCCCCeEeEEEEEECCEEEE-----EcCCCCCCceEEEECCCcEEEEcccC---CCCeeEEEECCccc
Confidence 5667776 45556789999999999999999 99999999999999999998877442 5788999876553
Q ss_pred -------------------eEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 81 -------------------RTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 81 -------------------r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
++|+|+|+|++|+.+||+||+.++..
T Consensus 71 ~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~ 115 (125)
T cd01252 71 QQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISP 115 (125)
T ss_pred cccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 68999999999999999999998643
No 5
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.87 E-value=1.5e-21 Score=138.60 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=77.1
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCC-ccCceeeEEEeeCCce
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDD-KVFRKFSFKAEHANMR 81 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~-~~~~~~~F~i~~~~~r 81 (160)
+.|.|.. .....+.|+||||||++++|+| |+++.+..+.|.|+|.+|.|...+... ..+++++|.|.++ .|
T Consensus 4 k~G~L~K--kg~~~k~WkkRwfvL~~~~L~y-----yk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~-~r 75 (100)
T cd01233 4 KKGYLNF--PEETNSGWTRRFVVVRRPYLHI-----YRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAVCTK-HR 75 (100)
T ss_pred eeEEEEe--eCCCCCCcEEEEEEEECCEEEE-----EccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEEECC-CC
Confidence 3466644 3334588999999999999999 999999999999999999887764321 1246789999876 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|+|+|+|++|+.+||.+|+...
T Consensus 76 t~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 76 GYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred EEEEEcCCHHHHHHHHHHhhhhh
Confidence 99999999999999999998753
No 6
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.86 E-value=3.1e-21 Score=137.90 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=68.1
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC----eEEEec-CCCCccCceeeEEEeeCCceEEEEEcCCH
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS----YKISPC-SSDDKVFRKFSFKAEHANMRTYYFAADTR 90 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~----~~V~~~-~~~~~~~~~~~F~i~~~~~r~~~l~Aese 90 (160)
.+.||||||||+++.|+| |+++.+..+.|.|+|.. +.|... ++....+..++|.|.++ .|+|+|+|+|+
T Consensus 13 ~k~wkkRwFvL~~~~L~Y-----yk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~-~Rty~l~a~s~ 86 (103)
T cd01251 13 TEGFKKRWFTLDDRRLMY-----FKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTP-ERKFLFACETE 86 (103)
T ss_pred CCCceeEEEEEeCCEEEE-----ECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeC-CeEEEEECCCH
Confidence 578999999999999999 99999999999999965 445432 22111133469999987 58999999999
Q ss_pred HHHHHHHHHHHHhH
Q psy407 91 ESMIQWMNALSLAS 104 (160)
Q Consensus 91 ~e~~~Wi~aL~~a~ 104 (160)
+|+.+||+||+.|.
T Consensus 87 ~e~~~Wi~ai~~v~ 100 (103)
T cd01251 87 QDRREWIAAFQNVL 100 (103)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999985
No 7
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.85 E-value=7.1e-21 Score=135.89 Aligned_cols=83 Identities=18% Similarity=0.275 Sum_probs=68.7
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCccCccc-eEEEcCCeE-EEecCCC-CccCceeeEEEeeCCceEEEEEcCCHH
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLL-GSILLPSYK-ISPCSSD-DKVFRKFSFKAEHANMRTYYFAADTRE 91 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~-g~I~L~~~~-V~~~~~~-~~~~~~~~F~i~~~~~r~~~l~Aese~ 91 (160)
.+|.|+||||||+++.|+| ||+..+.++. |.|+|..|. |..+... ...+++++|+|.+++ |+|||+|+|++
T Consensus 15 ~~K~WkrRwF~L~~~~L~y-----~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~-rt~~l~A~se~ 88 (101)
T cd01264 15 FIKRWKTRYFTLSGAQLLF-----QKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD-KTYILKAKDEK 88 (101)
T ss_pred eeecceeEEEEEeCCEEEE-----EeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCC-ceEEEEeCCHH
Confidence 5789999999999999999 9988665566 999999986 4444321 112457999999875 89999999999
Q ss_pred HHHHHHHHHHHh
Q psy407 92 SMIQWMNALSLA 103 (160)
Q Consensus 92 e~~~Wi~aL~~a 103 (160)
++++||++|+.|
T Consensus 89 e~e~WI~~i~~a 100 (101)
T cd01264 89 NAEEWLQCLNIA 100 (101)
T ss_pred HHHHHHHHHHhh
Confidence 999999999987
No 8
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.85 E-value=7.1e-21 Score=136.41 Aligned_cols=87 Identities=17% Similarity=0.263 Sum_probs=72.9
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeC---CceEEEEEc
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---NMRTYYFAA 87 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~---~~r~~~l~A 87 (160)
+-..|.||||||+|++..|+| ||++++ ..+.+.|+|.+|+|.+.... .+++|+|++.+| ++++|+|+|
T Consensus 14 ~~~~K~~KrrwF~lk~~~L~Y-----yK~kee~~~~p~i~lnl~gcev~~dv~~--~~~kf~I~l~~ps~~~~r~y~l~c 86 (106)
T cd01237 14 KLTLKGYKQYWFTFRDTSISY-----YKSKEDSNGAPIGQLNLKGCEVTPDVNV--AQQKFHIKLLIPTAEGMNEVWLRC 86 (106)
T ss_pred hhhhhhheeEEEEEeCCEEEE-----EccchhcCCCCeEEEecCceEEcccccc--cccceEEEEecCCccCCeEEEEEC
Confidence 445788999999999999999 998877 45777888899998774321 256799999854 468999999
Q ss_pred CCHHHHHHHHHHHHHhHhh
Q psy407 88 DTRESMIQWMNALSLASIL 106 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~~~ 106 (160)
+||+++++||+||+.|+++
T Consensus 87 dsEeqya~Wmaa~rlas~g 105 (106)
T cd01237 87 DNEKQYAKWMAACRLASKG 105 (106)
T ss_pred CCHHHHHHHHHHHHHhhCC
Confidence 9999999999999999865
No 9
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.85 E-value=1.7e-20 Score=131.46 Aligned_cols=82 Identities=18% Similarity=0.250 Sum_probs=69.2
Q ss_pred ecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcC
Q psy407 11 NDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAAD 88 (160)
Q Consensus 11 ~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Ae 88 (160)
|..+-.+.|++|||||+++.|+| |+++.+ ..++|.|+|.+|.|...+ .+++.|.|.....++|+|.|+
T Consensus 7 K~~~~~k~Wk~RwFvL~~g~L~Y-----yk~~~~~~~~~~G~I~L~~~~i~~~~-----~~~~~F~i~~~~~r~~~L~A~ 76 (91)
T cd01247 7 KWTNYINGWQDRYFVLKEGNLSY-----YKSEAEKSHGCRGSIFLKKAIIAAHE-----FDENRFDISVNENVVWYLRAE 76 (91)
T ss_pred EeccccCCCceEEEEEECCEEEE-----EecCccCcCCCcEEEECcccEEEcCC-----CCCCEEEEEeCCCeEEEEEeC
Confidence 33456889999999999999999 999877 448999999999876542 235689997666699999999
Q ss_pred CHHHHHHHHHHHHH
Q psy407 89 TRESMIQWMNALSL 102 (160)
Q Consensus 89 se~e~~~Wi~aL~~ 102 (160)
|++|+++||+||++
T Consensus 77 s~~e~~~Wi~al~~ 90 (91)
T cd01247 77 NSQSRLLWMDSVVR 90 (91)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999986
No 10
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.84 E-value=1.7e-20 Score=134.70 Aligned_cols=82 Identities=23% Similarity=0.288 Sum_probs=67.6
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeE-EEecCCCCc----cCceeeEEEeeCCceEEEEEc
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYK-ISPCSSDDK----VFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~-V~~~~~~~~----~~~~~~F~i~~~~~r~~~l~A 87 (160)
+.+.||+|||||++++|+| |+++.+ ..++|.|+|.++. |+.+.+... .+++++|+|.+++ ++|||.|
T Consensus 17 ~~~nwKkRwFvL~~~~L~Y-----yk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~-r~~yl~A 90 (106)
T cd01238 17 SPLNYKERLFVLTKSKLSY-----YEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDE-GTLYVFA 90 (106)
T ss_pred CCCCceeEEEEEcCCEEEE-----ECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCC-CeEEEEc
Confidence 3458999999999999999 999876 4799999999976 444443221 2467899999864 7999999
Q ss_pred CCHHHHHHHHHHHHH
Q psy407 88 DTRESMIQWMNALSL 102 (160)
Q Consensus 88 ese~e~~~Wi~aL~~ 102 (160)
+|++|+++||.||++
T Consensus 91 ~s~~er~~WI~ai~~ 105 (106)
T cd01238 91 PTEELRKRWIKALKQ 105 (106)
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999999986
No 11
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.84 E-value=3.7e-20 Score=130.24 Aligned_cols=93 Identities=19% Similarity=0.255 Sum_probs=72.6
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeC--CeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCC----CccCceeeEEE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLAT--HVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSD----DKVFRKFSFKA 75 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~--~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~----~~~~~~~~F~i 75 (160)
|.|+|.. .....+.||+|||||++ ..|+| |+++.+..|.|.|+|..++ |....+. +...+.+.|.|
T Consensus 1 ~~G~L~K--~g~~~k~WkkRwFvL~~~~~~L~Y-----y~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i 73 (101)
T cd01235 1 CEGYLYK--RGALLKGWKPRWFVLDPDKHQLRY-----YDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDL 73 (101)
T ss_pred CeEEEEE--cCCCCCCccceEEEEECCCCEEEE-----ecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEE
Confidence 4577764 44467899999999994 59999 9999999999999999865 4432211 11135678988
Q ss_pred eeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 76 EHANMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 76 ~~~~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
.++ .|+|+|.|+|++|+.+||.+|+++
T Consensus 74 ~t~-~r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 74 KTS-KRTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred EeC-CceEEEECCCHHHHHHHHHHHHhh
Confidence 764 589999999999999999999986
No 12
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.83 E-value=4.7e-20 Score=132.38 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=65.0
Q ss_pred CCCCceEEEEEEeC-CeEEEcccCCCCCC-ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 15 ASTLCHNVYLLLAT-HVMVFSPEISGLGF-EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 15 ~~k~WkkRWFVL~~-~~L~y~~~~yYk~~-~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
..|.||||||||++ +.|+| |+++ .+..|+|.|+|..|....... +..+++++|.|.+++ |+|||.|+|++|
T Consensus 20 ~~K~WkrRWFvL~~~~~L~y-----~~d~~~~~~p~G~IdL~~~~~V~~~~-~~~~~~~~f~I~tp~-R~f~l~Aete~E 92 (104)
T cd01236 20 RSKRWQRRWFILYDHGLLTY-----ALDEMPTTLPQGTIDMNQCTDVVDAE-ARTGQKFSICILTPD-KEHFIKAETKEE 92 (104)
T ss_pred eeccccceEEEEeCCCEEEE-----eeCCCCCcccceEEEccceEEEeecc-cccCCccEEEEECCC-ceEEEEeCCHHH
Confidence 46789999999985 67777 7765 467899999998886433222 223567899999875 899999999999
Q ss_pred HHHHHHHHHH
Q psy407 93 MIQWMNALSL 102 (160)
Q Consensus 93 ~~~Wi~aL~~ 102 (160)
+++||++|..
T Consensus 93 ~~~Wi~~l~~ 102 (104)
T cd01236 93 ISWWLNMLMV 102 (104)
T ss_pred HHHHHHHHHh
Confidence 9999999974
No 13
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.83 E-value=5.8e-20 Score=130.59 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=74.1
Q ss_pred ceEEEEecCCC----CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCC
Q psy407 5 CFLIILNDNMA----STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 5 ~~~~~~~~~~~----~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
|++++++..-+ .+.||+|||||++..|+| |+++. ..+.|+|+|..+. |+.+.+ +..+++|+|+|.+++
T Consensus 3 ~~~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y-----~k~~~-~~~~g~I~L~~i~~ve~v~~-~~~~~~~~fqivt~~ 75 (98)
T cd01244 3 GNLQQVDRSRLAWKKVLHFKKRYFQLTTTHLSW-----AKDVQ-CKKSALIKLAAIKGTEPLSD-KSFVNVDIITIVCED 75 (98)
T ss_pred cccEEEEcccCCCccCcCCceeEEEECCCEEEE-----ECCCC-CceeeeEEccceEEEEEcCC-cccCCCceEEEEeCC
Confidence 56677776422 257999999999999999 99876 6799999999865 444544 334667999999875
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
++|||.|+|++|+++||.||+.+
T Consensus 76 -r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 76 -DTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred -CeEEEECCCHHHHHHHHHHHhcC
Confidence 89999999999999999999864
No 14
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.83 E-value=4.4e-20 Score=131.18 Aligned_cols=91 Identities=18% Similarity=0.238 Sum_probs=76.7
Q ss_pred ccceEEEEecCCC-CCCceEEEEEEeC----CeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEee
Q psy407 3 HVCFLIILNDNMA-STLCHNVYLLLAT----HVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEH 77 (160)
Q Consensus 3 ~~~~~~~~~~~~~-~k~WkkRWFVL~~----~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~ 77 (160)
|.|+|+ |..++ .|.||+|||+|.+ .+|+| |+++.+.+|+|.|+|..+.|.++.+. ..+++|||+|.+
T Consensus 1 ~~G~l~--K~g~~~~K~wK~rwF~l~~~~s~~~l~y-----f~~~~~~~p~gli~l~~~~V~~v~ds-~~~r~~cFel~~ 72 (98)
T cd01245 1 KKGNLL--KRTKSVTKLWKTLYFALILDGSRSHESL-----LSSPKKTKPIGLIDLSDAYLYPVHDS-LFGRPNCFQIVE 72 (98)
T ss_pred CCCccc--cCCCCcccccceeEEEEecCCCCceEEE-----EcCCCCCCccceeeccccEEEEcccc-ccCCCeEEEEec
Confidence 356655 44445 8999999999986 89999 99999999999999999988887652 247889999998
Q ss_pred CCc-eEEEEEcCCHHHHHHHHHHHHH
Q psy407 78 ANM-RTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 78 ~~~-r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
+.. .+|+++|++ +|+++||++|+.
T Consensus 73 ~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 73 RALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 754 689999999 999999999985
No 15
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.82 E-value=1.2e-19 Score=129.62 Aligned_cols=84 Identities=13% Similarity=0.093 Sum_probs=70.3
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCC------eEEEcccCCCCCCcc-----CccceEEEcCCeEE-EecCCCCccCcee
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATH------VMVFSPEISGLGFEE-----EKLLGSILLPSYKI-SPCSSDDKVFRKF 71 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~------~L~y~~~~yYk~~~e-----~~~~g~I~L~~~~V-~~~~~~~~~~~~~ 71 (160)
.|+|... |.||||||||++. .|.| |+++.+ ..|.|+|+|.+|.. ...++ .+++|
T Consensus 5 ~GyL~K~------K~~kkRwFVLr~~~~~~p~~Ley-----yk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d---~k~~~ 70 (101)
T cd01257 5 SGYLRKQ------KSMHKRFFVLRAESSGGPARLEY-----YENEKKFLQKGSAPKRVIPLESCFNINKRAD---AKHRH 70 (101)
T ss_pred EEEEeEe------cCcEeEEEEEecCCCCCCceEEE-----ECChhhccccCCCceEEEEccceEEEeeccc---cccCe
Confidence 5777764 8999999999987 6999 999875 67999999999974 33322 25679
Q ss_pred eEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy407 72 SFKAEHANMRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 72 ~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
+|.|.+++ ++|+|+|+|++|+++||.+|..
T Consensus 71 ~f~i~t~d-r~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 71 LIALYTRD-EYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred EEEEEeCC-ceEEEEeCCHHHHHHHHHHHhh
Confidence 99999876 7999999999999999999964
No 16
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=1.9e-19 Score=124.15 Aligned_cols=90 Identities=16% Similarity=0.306 Sum_probs=74.0
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
|+|.. +...+.+.|++|||||+++.|.| |+++.+ ..+.+.|+|.+|.|..+... ..++++|.|.+++ ++
T Consensus 3 G~L~k-k~~~~~~~W~kr~~~L~~~~l~~-----y~~~~~~~~~~~~~i~l~~~~v~~~~~~--~~~~~~f~i~~~~-~~ 73 (94)
T cd01250 3 GYLYK-RSSKSNKEWKKRWFVLKNGQLTY-----HHRLKDYDNAHVKEIDLRRCTVRHNGKQ--PDRRFCFEVISPT-KT 73 (94)
T ss_pred ceEEE-ECCCcCCCceEEEEEEeCCeEEE-----EcCCcccccccceEEeccceEEecCccc--cCCceEEEEEcCC-cE
Confidence 45544 33333688999999999999999 998876 67889999999988776542 1378999999876 89
Q ss_pred EEEEcCCHHHHHHHHHHHHHh
Q psy407 83 YYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a 103 (160)
|+|+|+|++++.+||.||+++
T Consensus 74 ~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 74 WHFQADSEEERDDWISAIQES 94 (94)
T ss_pred EEEECCCHHHHHHHHHHHhcC
Confidence 999999999999999999864
No 17
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.82 E-value=5.3e-19 Score=121.61 Aligned_cols=95 Identities=23% Similarity=0.369 Sum_probs=83.3
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc---cCccceEEEcCCeEEEecCCCC---ccCceeeEEEe
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE---EEKLLGSILLPSYKISPCSSDD---KVFRKFSFKAE 76 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~---e~~~~g~I~L~~~~V~~~~~~~---~~~~~~~F~i~ 76 (160)
|.|+|.... ...+.|++|||||.++.|+| |+++. ...+.+.|+|.++.|......+ ....+++|.|.
T Consensus 3 ~~G~L~~~~--~~~~~wk~r~~vL~~~~L~~-----~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~ 75 (104)
T PF00169_consen 3 KEGWLLKKS--SSRKKWKKRYFVLRDSYLLY-----YKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEIT 75 (104)
T ss_dssp EEEEEEEEE--SSSSSEEEEEEEEETTEEEE-----ESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEE
T ss_pred EEEEEEEEC--CCCCCeEEEEEEEECCEEEE-----EecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEE
Confidence 568888777 67789999999999999999 99988 6889999999999988865532 23678999999
Q ss_pred eCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 77 HANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 77 ~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+++.++|+|+|+|++++.+||.+|+.|.
T Consensus 76 ~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 76 TPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp ETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9887799999999999999999999985
No 18
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.82 E-value=1.6e-19 Score=129.84 Aligned_cols=82 Identities=21% Similarity=0.213 Sum_probs=66.7
Q ss_pred CCCceEEEEEEeCCe-------EEEcccCCCCCCccCccceEEEcCCeEEEecCC---CCccCceeeEEEeeCCceEEEE
Q psy407 16 STLCHNVYLLLATHV-------MVFSPEISGLGFEEEKLLGSILLPSYKISPCSS---DDKVFRKFSFKAEHANMRTYYF 85 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~-------L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~---~~~~~~~~~F~i~~~~~r~~~l 85 (160)
.+.||||||||++.. |+| |+++.+.+|.|.|+|..|.+..... .......|.|.|.++ .|+|||
T Consensus 16 ~~~WkrRwFvL~~~~l~~~~~~L~Y-----yk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~-~r~y~l 89 (108)
T cd01266 16 RTKWVRRYFVLHCGDRERNLFALEY-----YKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETI-VRDLYL 89 (108)
T ss_pred ccCcEEEEEEEeccccCCCcceEEE-----ECCCCCCccceEEECCccEEEcccccccccCcccceEEEEEeC-CccEEE
Confidence 458999999999875 588 9999999999999999987643321 111234678999876 589999
Q ss_pred EcCCHHHHHHHHHHHHHh
Q psy407 86 AADTRESMIQWMNALSLA 103 (160)
Q Consensus 86 ~Aese~e~~~Wi~aL~~a 103 (160)
+|+|++||++||.+|++.
T Consensus 90 ~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 90 VAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EECCHHHHHHHHHHHHhh
Confidence 999999999999999874
No 19
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=2.4e-19 Score=122.95 Aligned_cols=88 Identities=20% Similarity=0.245 Sum_probs=74.1
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccC--ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~--~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
.|+|.... ...+.|++|||||+++.|+| |+++.+. .+.|.|+|.+|.|.... .++++|.|.+++.+
T Consensus 2 ~G~L~k~~--~~~~~W~~r~~vl~~~~L~~-----~~~~~~~~~~~~~~i~l~~~~~~~~~-----~~~~~F~i~~~~~~ 69 (91)
T cd01246 2 EGWLLKWT--NYLKGWQKRWFVLDNGLLSY-----YKNKSSMRGKPRGTILLSGAVISEDD-----SDDKCFTIDTGGDK 69 (91)
T ss_pred eEEEEEec--ccCCCceeeEEEEECCEEEE-----EecCccCCCCceEEEEeceEEEEECC-----CCCcEEEEEcCCCC
Confidence 35554443 34588999999999999999 9999877 89999999999876532 34789999987778
Q ss_pred EEEEEcCCHHHHHHHHHHHHHh
Q psy407 82 TYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+|+|+|+|++|+.+||.||+.|
T Consensus 70 ~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 70 TLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEEECCCHHHHHHHHHHHHhC
Confidence 9999999999999999999875
No 20
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.76 E-value=5.1e-18 Score=120.53 Aligned_cols=85 Identities=21% Similarity=0.285 Sum_probs=70.3
Q ss_pred cCCCCCCceEEEEEEeCCeEEEcccCCCCCCccC--ccce--EEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEc
Q psy407 12 DNMASTLCHNVYLLLATHVMVFSPEISGLGFEEE--KLLG--SILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 12 ~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~--~~~g--~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
.+.+.+.|++|||||+++.|+| |+++... ...+ .|+|.++.|..+.+. .+++++|.|..++.++|+|+|
T Consensus 16 ~~~~~~~Wk~r~~vL~~~~L~~-----ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~--~k~~~~F~l~~~~~~~~~f~a 88 (104)
T cd01253 16 KKASNRSWDNVYGVLCGQSLSF-----YKDEKMAAENVHGEPPVDLTGAQCEVASDY--TKKKHVFRLRLPDGAEFLFQA 88 (104)
T ss_pred cccCCCCcceEEEEEeCCEEEE-----EecCcccccCCCCCCcEeccCCEEEecCCc--ccCceEEEEEecCCCEEEEEC
Confidence 3556778999999999999999 9987653 3444 788889888777542 267899999887779999999
Q ss_pred CCHHHHHHHHHHHHHh
Q psy407 88 DTRESMIQWMNALSLA 103 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a 103 (160)
+|+++|.+||++|+.|
T Consensus 89 ~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 89 PDEEEMSSWVRALKSA 104 (104)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999999999864
No 21
>KOG0930|consensus
Probab=99.71 E-value=4.2e-17 Score=134.08 Aligned_cols=95 Identities=16% Similarity=0.201 Sum_probs=81.9
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC--
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-- 79 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-- 79 (160)
|+-|.|+.+. .++.+.||||||||.++|||| |.--.+++|+|.|+|....|..+.+ ..++|||+|..+.
T Consensus 261 dREGWLlKlg-g~rvktWKrRWFiLtdNCLYY-----Fe~tTDKEPrGIIpLeNlsir~Ved---P~kP~cfEly~ps~~ 331 (395)
T KOG0930|consen 261 DREGWLLKLG-GNRVKTWKRRWFILTDNCLYY-----FEYTTDKEPRGIIPLENLSIREVED---PKKPNCFELYIPSNK 331 (395)
T ss_pred cccceeeeec-CCcccchhheeEEeecceeee-----eeeccCCCCCcceeccccceeeccC---CCCCCeEEEecCCCC
Confidence 7789999984 347889999999999999999 8878889999999999988888854 2789999986442
Q ss_pred -------------------ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 -------------------MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 -------------------~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+..|-++|.+.+|+.+||++|+.+..
T Consensus 332 gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 332 GQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred cCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 45799999999999999999999864
No 22
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=2.2e-16 Score=115.53 Aligned_cols=83 Identities=13% Similarity=0.237 Sum_probs=72.5
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCcc-------CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcC
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEE-------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAAD 88 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Ae 88 (160)
.+.|+++||||+++.|++ ||++.. ......|.|.++.+.++.+. .+|+++|+|.+++.+.|.|+|.
T Consensus 23 ~R~Wk~~y~vL~g~~L~~-----yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy--~Kr~~VF~L~~~~g~~~lfqA~ 95 (117)
T cd01230 23 KRSWKMFYGILRGLVLYL-----QKDEHKPGKSLSETELKNAISIHHALATRASDY--SKKPHVFRLRTADWREFLFQTS 95 (117)
T ss_pred CCcceEEEEEEECCEEEE-----EccCcccccccccccccceEEeccceeEeeccc--cCCCcEEEEEcCCCCEEEEECC
Confidence 578999999999999999 999864 45678999999887665543 3899999999988899999999
Q ss_pred CHHHHHHHHHHHHHhHh
Q psy407 89 TRESMIQWMNALSLASI 105 (160)
Q Consensus 89 se~e~~~Wi~aL~~a~~ 105 (160)
+++||++||++|+.|+.
T Consensus 96 ~~ee~~~Wi~~I~~~~~ 112 (117)
T cd01230 96 SLKELQSWIERINVVAA 112 (117)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999999873
No 23
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.67 E-value=4.4e-16 Score=110.99 Aligned_cols=91 Identities=16% Similarity=0.127 Sum_probs=63.2
Q ss_pred cceEEEEecCCCCCCceEEEEEEe-CCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCC-CccCceeeEEEeeC---
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLA-THVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSD-DKVFRKFSFKAEHA--- 78 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~-~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~-~~~~~~~~F~i~~~--- 78 (160)
.|.|.. .....+.|++|||||+ ++.|.| |+++......|.|+|.++.|..+... ....+++.|.|...
T Consensus 4 ~G~L~K--~g~~~~~Wk~R~f~L~~~~~l~~-----yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~ 76 (102)
T cd01241 4 EGWLHK--RGEYIKTWRPRYFLLKSDGSFIG-----YKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWT 76 (102)
T ss_pred EEEEEe--ecCCCCCCeeEEEEEeCCCeEEE-----EecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCC
Confidence 344443 4456789999999999 788887 77765544557888877765443210 01256689999721
Q ss_pred --CceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 79 --NMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 79 --~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
..|+ |.|+|++|+++||+||+.+
T Consensus 77 ~~~~r~--f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 77 TVIERT--FHVESPEEREEWIHAIQTV 101 (102)
T ss_pred cccCEE--EEeCCHHHHHHHHHHHHhh
Confidence 2344 4699999999999999876
No 24
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.65 E-value=1.5e-15 Score=105.97 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=67.7
Q ss_pred CCCCCCceEEEEEE--eCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCH
Q psy407 13 NMASTLCHNVYLLL--ATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTR 90 (160)
Q Consensus 13 ~~~~k~WkkRWFVL--~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese 90 (160)
+.-.++|+|||||| ..+.|.| |+++.+..+.|.|+|..+.|..-. +...|.|.+ +...|+|.|.|+
T Consensus 8 r~~lqG~~kRyFvL~~~~G~LsY-----y~~~~~~~~rGsi~v~~a~is~~~------~~~~I~ids-g~~i~hLKa~s~ 75 (89)
T PF15409_consen 8 RKPLQGWHKRYFVLDFEKGTLSY-----YRNQNSGKLRGSIDVSLAVISANK------KSRRIDIDS-GDEIWHLKAKSQ 75 (89)
T ss_pred cccCCCceeEEEEEEcCCcEEEE-----EecCCCCeeEeEEEccceEEEecC------CCCEEEEEc-CCeEEEEEcCCH
Confidence 44578999999999 7899999 999988899999999998775542 223788876 467999999999
Q ss_pred HHHHHHHHHHHHh
Q psy407 91 ESMIQWMNALSLA 103 (160)
Q Consensus 91 ~e~~~Wi~aL~~a 103 (160)
++.+.|++||+.|
T Consensus 76 ~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 76 EDFQRWVSALQKA 88 (89)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999986
No 25
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.65 E-value=1.2e-15 Score=111.95 Aligned_cols=80 Identities=14% Similarity=0.282 Sum_probs=68.2
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCccCccceEEEc-CCeEEEecCCC---------CccCceeeEEEeeCCceEEEEEc
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILL-PSYKISPCSSD---------DKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L-~~~~V~~~~~~---------~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
.|++|||||++..|.| |+++.+..++|.|.| .++.|...... +...+.+.|+|.++ .|+|.|.|
T Consensus 32 ~w~kRWFvlr~s~L~Y-----~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~-~R~~~l~a 105 (121)
T cd01254 32 RWQKRWFIVKESFLAY-----MDDPSSAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNS-NRSLKLKC 105 (121)
T ss_pred CCcceeEEEeCCEEEE-----EcCCCCCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcC-CcEEEEEe
Confidence 6999999999999999 999999999999999 55777754331 22356799999886 58999999
Q ss_pred CCHHHHHHHHHHHHHh
Q psy407 88 DTRESMIQWMNALSLA 103 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a 103 (160)
+|+.++.+||++|+.|
T Consensus 106 ~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 106 KSSRKLKQWMASIEDA 121 (121)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 9999999999999875
No 26
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.64 E-value=8.7e-15 Score=98.66 Aligned_cols=96 Identities=20% Similarity=0.298 Sum_probs=77.4
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
+.|+|...... +...|++|||+|.+++|.| |+++.. ..+.+.|+|.++.|............++|.|..++
T Consensus 3 ~~G~l~~~~~~-~~~~~~~~~~~L~~~~l~~-----~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~ 76 (102)
T smart00233 3 KEGWLYKKSGG-KKKSWKKRYFVLFNSTLLY-----YKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTAD 76 (102)
T ss_pred eeEEEEEeCCC-ccCCceEEEEEEECCEEEE-----EeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecC
Confidence 45666554443 6678999999999999999 988766 57899999999988776543212467899999876
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 80 MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..+|+|+|+|++++.+|+.+|+.++
T Consensus 77 ~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 77 RRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred CceEEEEcCCHHHHHHHHHHHHHhh
Confidence 5599999999999999999999874
No 27
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.55 E-value=1.5e-13 Score=92.55 Aligned_cols=93 Identities=18% Similarity=0.278 Sum_probs=75.0
Q ss_pred cceEEEEecCC--CCCCceEEEEEEeCCeEEEcccCCCCCCccCccc-eEEEcCCeEEEecCCCCccCceeeEEEeeCC-
Q psy407 4 VCFLIILNDNM--ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLL-GSILLPSYKISPCSSDDKVFRKFSFKAEHAN- 79 (160)
Q Consensus 4 ~~~~~~~~~~~--~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~-g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~- 79 (160)
.|+|..+.... +.+.|++|||+|.+..|+| |+++.+..+. +.++|.+..|...... ...+++|.|....
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~-----~~~~~~~~~~~~~~~l~~~~v~~~~~~--~~~~~~F~i~~~~~ 74 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLL-----YKSDDKKEIKPGSIPLSEISVEEDPDG--SDDPNCFAIVTKDR 74 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEE-----EEcCCCCcCCCCEEEccceEEEECCCC--CCCCceEEEECCCC
Confidence 35566555554 3578999999999999999 9988776666 7999999877665432 1467899998874
Q ss_pred -ceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 80 -MRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 80 -~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
.+.++|+|+|+++++.||++|+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 75 GRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred CcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 789999999999999999999875
No 28
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.54 E-value=5.7e-14 Score=93.84 Aligned_cols=81 Identities=22% Similarity=0.322 Sum_probs=69.0
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
.+.|++|||+|.+..|.+ |+.... ..+.+.|+|.++.|...... .+..++|.|...+.+.|+|+|+|++|
T Consensus 13 ~~~w~~~~~~L~~~~l~~-----~~~~~~~~~~~~~~~i~l~~~~v~~~~~~--~~~~~~f~i~~~~~~~~~~~~~s~~~ 85 (96)
T cd00821 13 RKGWKRRWFVLFNDLLLY-----YKKKSSKKSYKPKGSIPLSGAEVEESPDD--SGRKNCFEIRTPDGRSYLLQAESEEE 85 (96)
T ss_pred hCCccEEEEEEECCEEEE-----EECCCCCcCCCCcceEEcCCCEEEECCCc--CCCCcEEEEecCCCcEEEEEeCCHHH
Confidence 378999999999999998 877765 68999999999888776542 13578999987665899999999999
Q ss_pred HHHHHHHHHHh
Q psy407 93 MIQWMNALSLA 103 (160)
Q Consensus 93 ~~~Wi~aL~~a 103 (160)
+.+|+++|+.|
T Consensus 86 ~~~W~~~l~~~ 96 (96)
T cd00821 86 REEWIEALQSA 96 (96)
T ss_pred HHHHHHHHhcC
Confidence 99999999864
No 29
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.54 E-value=6.8e-14 Score=98.87 Aligned_cols=90 Identities=12% Similarity=0.133 Sum_probs=74.3
Q ss_pred EEecCCCCC-CceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC-------c
Q psy407 9 ILNDNMAST-LCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-------M 80 (160)
Q Consensus 9 ~~~~~~~~k-~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-------~ 80 (160)
.++.-+-++ .=|+|||||.+.||+| |++.++++++|.|+|.+..|..+... -..++|+|.|.+++ .
T Consensus 8 ~~~n~~~m~ggsK~~WFVLt~~~L~w-----ykd~eeKE~kyilpLdnLk~Rdve~g-f~sk~~~FeLfnpd~rnvykd~ 81 (110)
T cd01256 8 SISNVGIMKGGSKDYWFVLTSESLSW-----YKDDEEKEKKYMLPLDGLKLRDIEGG-FMSRNHKFALFYPDGRNVYKDY 81 (110)
T ss_pred EeeccceecCCCcceEEEEecceeee-----ecccccccccceeeccccEEEeeccc-ccCCCcEEEEEcCcccccccch
Confidence 344444433 3799999999999999 99999999999999999999888652 24788999998764 4
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 81 RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
++.-|+|+|.+++..|.+.+-.|.
T Consensus 82 k~lel~~~~~e~vdswkasflrag 105 (110)
T cd01256 82 KQLELGCETLEEVDSWKASFLRAG 105 (110)
T ss_pred heeeecCCCHHHHHHHHHHHHhcc
Confidence 667899999999999999988873
No 30
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.53 E-value=8.3e-14 Score=101.86 Aligned_cols=83 Identities=25% Similarity=0.288 Sum_probs=60.4
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCcc--------------CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEE--------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM 80 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~ 80 (160)
+.+.|+..|+||++..|++ ||++.. ..|.+.|.|.++....+.+- .+|+|+|+|.+++.
T Consensus 22 ~~R~Wk~~y~vL~g~~L~~-----~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~dY--~Kr~~VFrL~~~dg 94 (119)
T PF15410_consen 22 SKRSWKQVYAVLQGGQLYF-----YKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASDY--TKRKNVFRLRTADG 94 (119)
T ss_dssp S---EEEEEEEEETTEEEE-----ESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETTB--TTCSSEEEEE-TTS
T ss_pred CCCCccEEeEEEECCEEEE-----EccCcccccCCcccccccccCcceeEEEecceEEEeCccc--ccCCeEEEEEeCCC
Confidence 5678999999999999999 998432 23567799999888775442 47999999999888
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 81 RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..|.|+|.|++||++||.+|+.++
T Consensus 95 ~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 95 SEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhhhc
Confidence 999999999999999999999875
No 31
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=2e-13 Score=97.05 Aligned_cols=83 Identities=16% Similarity=0.233 Sum_probs=67.7
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCC-----ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEc
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGF-----EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~-----~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
....+.|+.|||+|-+..|.| ++.. ..-.+++.|+|.++.|....+ ...+|+|.|.... ++|+|+|
T Consensus 12 ~~~~~~~k~RyffLFnd~Ll~-----~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~---~~~~~~F~I~~~~-rsf~l~A 82 (101)
T cd01219 12 SSTTEKTEERYLFLFNDLLLY-----CVPRKMIGGSKFKVRARIDVSGMQVCEGDN---LERPHSFLVSGKQ-RCLELQA 82 (101)
T ss_pred ecCCCCceeEEEEEeCCEEEE-----EEcccccCCCcEEEEEEEecccEEEEeCCC---CCcCceEEEecCC-cEEEEEc
Confidence 344578999999998888888 7742 124578999999999876532 2578999998765 8999999
Q ss_pred CCHHHHHHHHHHHHHhH
Q psy407 88 DTRESMIQWMNALSLAS 104 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~ 104 (160)
+|++|+.+||.||+.|+
T Consensus 83 ~s~eEk~~W~~ai~~~i 99 (101)
T cd01219 83 RTQKEKNDWVQAIFSII 99 (101)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999999986
No 32
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.48 E-value=6.9e-13 Score=94.35 Aligned_cols=89 Identities=18% Similarity=0.231 Sum_probs=70.5
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccC---ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEE---KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~---~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
|-|+.+-.+ +.|+|+||.+.|..||+ .+..... ++.|.|+|.++.|..+.+. .+.+|+|+|.++ .+
T Consensus 6 G~L~K~~~k---~~~~R~~FLFnD~LlY~-----~~~~~~~~~y~~~~~i~L~~~~V~~~~~~--~~~~~~F~I~~~-~k 74 (99)
T cd01220 6 GCLLKLSKK---GLQQRMFFLFSDLLLYT-----SKSPTDQNSFRILGHLPLRGMLTEESEHE--WGVPHCFTIFGG-QC 74 (99)
T ss_pred EEEEEEeCC---CCceEEEEEccceEEEE-----EeecCCCceEEEEEEEEcCceEEeeccCC--cCCceeEEEEcC-Ce
Confidence 455555443 46889999999988887 5443332 5899999999998876542 256789999976 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|.|+|.|++|+.+||.+|+.|+
T Consensus 75 s~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 75 AITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred EEEEECCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999986
No 33
>KOG3640|consensus
Probab=99.47 E-value=5.8e-14 Score=129.26 Aligned_cols=100 Identities=21% Similarity=0.236 Sum_probs=81.1
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeEEEecCC--CCccCceeeEEEe
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYKISPCSS--DDKVFRKFSFKAE 76 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~~~~--~~~~~~~~~F~i~ 76 (160)
-..|||+|+++..|++.|+||||+|.++++.| .|.+.+ +.|.|.|+|..|+=..+.+ ++-+.+.+.|.|+
T Consensus 991 EYrGFLtmfed~sgfGaWhRyWc~L~gg~I~f-----Wk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie 1065 (1116)
T KOG3640|consen 991 EYRGFLTMFEDGSGFGAWHRYWCALHGGEIKF-----WKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIE 1065 (1116)
T ss_pred eeeeeeeeeeccCCCchhhhhhHHhcCCeeee-----ecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEE
Confidence 36799999999999999999999999999999 555544 5699999999997433322 2446888999987
Q ss_pred eC------------Cce-EEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 77 HA------------NMR-TYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 77 ~~------------~~r-~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.. ..| ..+|+|++.++++.|+++|..+...
T Consensus 1066 ~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1066 VWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred eecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 21 123 6899999999999999999998643
No 34
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.40 E-value=6.3e-12 Score=91.09 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=50.6
Q ss_pred ceEEEEecCCCCCCceEEEEEEe-CCeEEEcccCCCCCCcc-------------CccceEEEc--CCeEEEe---cCCCC
Q psy407 5 CFLIILNDNMASTLCHNVYLLLA-THVMVFSPEISGLGFEE-------------EKLLGSILL--PSYKISP---CSSDD 65 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~-~~~L~y~~~~yYk~~~e-------------~~~~g~I~L--~~~~V~~---~~~~~ 65 (160)
|+|-....+ -.+.||+|||||+ ++.|.| ||.+.+ ....|.+.. ....+.. ....+
T Consensus 3 G~l~K~~~~-~~kgWk~RwFiL~k~~~L~Y-----yK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (112)
T PF15413_consen 3 GYLYKWGNK-FGKGWKKRWFILRKDGVLSY-----YKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFG 76 (112)
T ss_dssp EEEEE--TT-S-S--EEEEEEEE-TTEEEE-----ESS-------------TT-SB-SEEEE---GGGT-EEEES-T--S
T ss_pred ceEEEecCC-CCcCccccEEEEEeCCEEEE-----eecccccccccccccchhceEeecccCcccccccccccccCCccc
Confidence 444444444 3679999999999 999999 998322 222333332 1111211 11111
Q ss_pred ccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 66 KVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 66 ~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
..-...|.|.++ .++|+|.|+|.+|+.+||.||+.|
T Consensus 77 -~~~~~~~~i~T~-~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 77 -EIHLKVFSIFTP-TKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -S-SSEEEEEE-S-S-EEEEEESSHHHHHHHHHHHHH-
T ss_pred -CcCCCCcEEECC-CcEEEEEECCHHHHHHHHHHHHhC
Confidence 112346777665 589999999999999999999876
No 35
>KOG3727|consensus
Probab=99.26 E-value=1.6e-13 Score=120.94 Aligned_cols=109 Identities=16% Similarity=0.103 Sum_probs=83.7
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEec-CCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPC-SSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~-~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
+.|...|++.....+.| |++. ..|-+.|+|.||+|.++ +.......+++.+...+++..+||+|++|+++.+
T Consensus 377 r~f~t~~dl~~~~~~s~-----~~s~--~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~ 449 (664)
T KOG3727|consen 377 RYFFTFRDLHLSLYKSS-----EDSR--GAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYAR 449 (664)
T ss_pred hHHHHHHHHHHHHHhhH-----hhhc--CCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHH
Confidence 33444455555556665 6655 67999999999999774 4432223444555555778999999999999999
Q ss_pred HHHHHHHhHhhccCCCcccccccccC-CCCCCCCCcCCCCCC
Q psy407 96 WMNALSLASILQNSSTGWEDRRLNNE-DNDSGFHGTYGRSSN 136 (160)
Q Consensus 96 Wi~aL~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~ 136 (160)
||+||+.|+++.++ +|.+|.+| +++.++..||++.+.
T Consensus 450 WMAaCrLASKGktM----ADSSY~sEV~sIlsfL~MQ~~n~g 487 (664)
T KOG3727|consen 450 WMAACRLASKGKTM----ADSSYQSEVQSILSFLKMQRPNSG 487 (664)
T ss_pred HHHHhhHhhcCCcc----ccccccHHHHHHHHHHHhcCCCCC
Confidence 99999999999999 88889888 888999999998774
No 36
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.24 E-value=1.1e-11 Score=88.48 Aligned_cols=101 Identities=17% Similarity=0.144 Sum_probs=74.4
Q ss_pred CCccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCC--------ccCceee
Q psy407 1 MDHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDD--------KVFRKFS 72 (160)
Q Consensus 1 ~~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~--------~~~~~~~ 72 (160)
|.|.|||.... ...+|.||||||||.+=.-|-+-.+.|+.++ ..|...|.|.|++|.-+++.. ....+|-
T Consensus 2 mk~sGyL~k~G-g~~~KkWKKRwFvL~qvsQYtfamcsy~ekk-s~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~f 79 (117)
T cd01234 2 MKHCGYLYAIG-KNVWKKWKKRFFVLVQVSQYTFAMCSYREKK-AEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHF 79 (117)
T ss_pred CceeEEEEecc-chhhhhhheeEEEEEchhHHHHHHHhhhhhc-CCchhheeecceEEeccCCCCCCcccccccccchhh
Confidence 55777766543 3467999999999997443333344476444 569999999999998765432 1145677
Q ss_pred EEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 73 FKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 73 F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
|+..-. ..+..|++++|.|+.-||.||-.|.
T Consensus 80 f~avke-gd~~~fa~~de~~r~lwvqa~yrat 110 (117)
T cd01234 80 FNAVKE-GDELKFATDDENERHLWVQAMYRAT 110 (117)
T ss_pred hheecc-CcEEEEeccchHHHHHHHHHHHHHc
Confidence 877654 4689999999999999999999986
No 37
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.09 E-value=4e-10 Score=81.44 Aligned_cols=98 Identities=14% Similarity=0.217 Sum_probs=61.4
Q ss_pred EEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-CC--ccCceeeEEEeeCC----
Q psy407 7 LIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-DD--KVFRKFSFKAEHAN---- 79 (160)
Q Consensus 7 ~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~~--~~~~~~~F~i~~~~---- 79 (160)
++.|++ .|-|.||||||+|+...|||+|-+--|+ .........+.+..|-..-. .. ..--.|+|.|.++.
T Consensus 5 ~LylK~-~gkKsWKk~~f~LR~SGLYy~~Kgksk~--srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~ 81 (114)
T cd01259 5 PLYLKA-DGKKSWKKYYFVLRSSGLYYFPKEKTKN--TRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSK 81 (114)
T ss_pred eEEEcc-CCCccceEEEEEEeCCeeEEccCCCcCC--HHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCcc
Confidence 344443 3558999999999999999833221111 12233445666665543211 10 00124677775432
Q ss_pred --ceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 80 --MRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 80 --~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
...-+|+||+++.+..||.|||.|..+.
T Consensus 82 ~s~~ik~lCaeDe~t~~~W~ta~Ri~KyG~ 111 (114)
T cd01259 82 GSQSIKYLCAEDLPTLDRWLTAIRIAKYGK 111 (114)
T ss_pred cchhheeeccCCHHHHHHHHHHHHHHhhhh
Confidence 2346999999999999999999987654
No 38
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=4.6e-09 Score=75.41 Aligned_cols=89 Identities=11% Similarity=0.150 Sum_probs=67.8
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCC---CccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLG---FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~---~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
|-|+.+- -+.-+.|+|.|-...|.| -+- ...-+..+.|+|.++.|..+.+. ..-+++|+|.++. +
T Consensus 8 G~L~K~~----rk~~~~R~ffLFnD~LvY-----~~~~~~~~~~~~~~~i~L~~~~v~~~~d~--~~~~n~f~I~~~~-k 75 (104)
T cd01218 8 GVLTKMC----RKKPKQRQFFLFNDILVY-----GNIVISKKKYNKQHILPLEGVQVESIEDD--GIERNGWIIKTPT-K 75 (104)
T ss_pred CcEEEee----cCCCceEEEEEecCEEEE-----EEeecCCceeeEeeEEEccceEEEecCCc--ccccceEEEecCC-e
Confidence 4455444 345677999999989987 321 11235678999999998877543 2457899999864 8
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 82 TYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|.+.|+|++|..+||.+|..|+.
T Consensus 76 Sf~v~A~s~~eK~eWl~~i~~ai~ 99 (104)
T cd01218 76 SFAVYAATETEKREWMLHINKCVT 99 (104)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999974
No 39
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.94 E-value=1.9e-08 Score=72.59 Aligned_cols=93 Identities=12% Similarity=0.159 Sum_probs=70.4
Q ss_pred eEEEEecCCCC---CCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCC-eEEEecCCC-----CccCceeeE
Q psy407 6 FLIILNDNMAS---TLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPS-YKISPCSSD-----DKVFRKFSF 73 (160)
Q Consensus 6 ~~~~~~~~~~~---k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~-~~V~~~~~~-----~~~~~~~~F 73 (160)
+.+.+-++++. ++|+|+|+||.+..|++ |..+.+ ..|...|.|.. +.|..+... +...-++.|
T Consensus 4 GwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~l-----Yd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF 78 (112)
T cd01242 4 GWLSLPNRTNKSRKPGWKKQYVVVSSRKILF-----YNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIF 78 (112)
T ss_pred eeEEccCCCCccccCCceEEEEEEeCCEEEE-----EecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEE
Confidence 34556666554 58999999999999998 887665 34778888865 555555322 223568899
Q ss_pred EEeeC-CceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 74 KAEHA-NMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 74 ~i~~~-~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+|... ..++.+|-|+++.|.+.|+.+|..-
T Consensus 79 ~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~ 109 (112)
T cd01242 79 QILYANEARDLLLLAPQTDEQNKWVSRLVKK 109 (112)
T ss_pred EEEeCCccceEEEEeCCchHHHHHHHHHHHh
Confidence 99864 3589999999999999999999874
No 40
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.87 E-value=3e-08 Score=71.02 Aligned_cols=91 Identities=12% Similarity=0.117 Sum_probs=60.6
Q ss_pred ceEEEEecCCCCC-CceEEEEEEeCC--eEEEcccCCCCCC----c-cCccceEEEcCCeEEEecCCCCccCceeeEEEe
Q psy407 5 CFLIILNDNMAST-LCHNVYLLLATH--VMVFSPEISGLGF----E-EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAE 76 (160)
Q Consensus 5 ~~~~~~~~~~~~k-~WkkRWFVL~~~--~L~y~~~~yYk~~----~-e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~ 76 (160)
|.|-+-+ +.+.+ .|.+.||..... .+.+. .+.... . ...---.|.|..|.+...+.. .|+|||.|.
T Consensus 3 GYLy~~~-k~~~~~~Wvk~y~~~~~~~~~f~m~--~~~q~s~~~~~g~v~~~e~~~l~sc~~r~~~~~---dRRFCFei~ 76 (104)
T cd01249 3 GYLYMQE-KSKFGGSWTKYYCTYSKETRIFTMV--PFNQKTKTDMKGAVAQDETLTLKSCSRRKTESI---DKRFCFDVE 76 (104)
T ss_pred ceEEEEc-CCCCCCeEEEEEEEEEcCCcEEEEE--ecccccccccCcccccceEEeeeeccccccCCc---cceeeEeee
Confidence 4444444 55555 799999998853 32110 002110 1 111223578888998887664 789999998
Q ss_pred eCCc-eEEEEEcCCHHHHHHHHHHHH
Q psy407 77 HANM-RTYYFAADTRESMIQWMNALS 101 (160)
Q Consensus 77 ~~~~-r~~~l~Aese~e~~~Wi~aL~ 101 (160)
.+.. .++.|+|+|++++..||.|+.
T Consensus 77 ~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 77 VEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred ecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 7642 389999999999999999984
No 41
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.80 E-value=1e-07 Score=69.77 Aligned_cols=91 Identities=13% Similarity=0.137 Sum_probs=66.5
Q ss_pred EEEecCCC-CCCceEEEEEEeCCeEEEcccCCCCCCccC------ccceEEEcC--CeEEEecCCC-----CccCceeeE
Q psy407 8 IILNDNMA-STLCHNVYLLLATHVMVFSPEISGLGFEEE------KLLGSILLP--SYKISPCSSD-----DKVFRKFSF 73 (160)
Q Consensus 8 ~~~~~~~~-~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~------~~~g~I~L~--~~~V~~~~~~-----~~~~~~~~F 73 (160)
+.+-++++ -++|+|+|+||.+..|++ |..+.+. .+.-.|.|+ .+.|..|... +...-++.|
T Consensus 8 vkvP~~~~~krGW~r~~vVv~~~Kl~l-----Yd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 8 VKIPKPGGVKKGWQRALVVVCDFKLFL-----YDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred EeccCCCCcccCceEEEEEEeCCEEEE-----EeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 34444444 357999999999999998 8866542 355667884 3777765432 233568899
Q ss_pred EEeeC------CceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 74 KAEHA------NMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 74 ~i~~~------~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+|+.. ...+.+|-|+|+.|.++|+.||..-
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 99752 3478999999999999999999863
No 42
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.76 E-value=1.6e-07 Score=68.33 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=67.5
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc-----------cCccceEEEcCCeEEEecCCCCccCceeeE
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE-----------EEKLLGSILLPSYKISPCSSDDKVFRKFSF 73 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~-----------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F 73 (160)
|-|+.+-.+ -+..+.|+|.|-++.|.| =|... .-..++.|+|..+.|...++.+ .-+++|
T Consensus 8 G~L~ki~~~--~~~~q~R~~FLFd~~Li~-----CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~--~~knaF 78 (112)
T cd01261 8 GTLTRVGPS--KKAKHERHVFLFDGLMVL-----CKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSS--EYKNAF 78 (112)
T ss_pred CcEEEEecc--cCCcceEEEEEecCeEEE-----EEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCc--ccCceE
Confidence 445555432 257889999999988876 44211 2345677999998887665432 348899
Q ss_pred EEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 74 KAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 74 ~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|.+.+.+.|.|+|.|++|..+||.+|..+.
T Consensus 79 ~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~ 109 (112)
T cd01261 79 EIILKDGNSVIFSAKNAEEKNNWMAALISVQ 109 (112)
T ss_pred EEEcCCCCEEEEEECCHHHHHHHHHHHHHHh
Confidence 9987556789999999999999999999875
No 43
>KOG2059|consensus
Probab=98.70 E-value=3.2e-08 Score=89.80 Aligned_cols=83 Identities=19% Similarity=0.271 Sum_probs=69.3
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
+.+|||||.|....|.| -|++. ..+.+.|+|.++. |+.+.+ ...+.+++|+|++++ |+.||+|.+-.|.++
T Consensus 584 ~~FKKryf~LT~~~Ls~-----~Ksp~-~q~~~~Ipl~nI~avEklee-~sF~~knv~qVV~~d-rtly~Q~~n~vEand 655 (800)
T KOG2059|consen 584 KNFKKRYFRLTTEELSY-----AKSPG-KQPIYTIPLSNIRAVEKLEE-KSFKMKNVFQVVHTD-RTLYVQAKNCVEAND 655 (800)
T ss_pred hhhhheEEEeccceeEE-----ecCCc-cCcccceeHHHHHHHHHhhh-hccCCCceEEEEecC-cceeEecCCchHHHH
Confidence 46999999999999998 77765 5699999999854 333433 345789999999987 799999999999999
Q ss_pred HHHHHHHhHhhc
Q psy407 96 WMNALSLASILQ 107 (160)
Q Consensus 96 Wi~aL~~a~~~~ 107 (160)
|+++|+.++...
T Consensus 656 WldaL~kvs~~N 667 (800)
T KOG2059|consen 656 WLDALRKVSCCN 667 (800)
T ss_pred HHHHHHHHhccC
Confidence 999999987654
No 44
>KOG0521|consensus
Probab=98.68 E-value=9.9e-09 Score=95.44 Aligned_cols=86 Identities=14% Similarity=0.223 Sum_probs=70.2
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
.+..+.|+||||-..++.+.| ++.-........++|..|.|.++... ..++|||+|+++ .++|.|+||++.+
T Consensus 285 ~~~~~tw~r~~f~~q~~~l~~-----~~r~~~~~~~~~~dL~~csvk~~~~~--~drr~CF~iiS~-tks~~lQAes~~d 356 (785)
T KOG0521|consen 285 SNASKTWKRRWFSIQDGQLGY-----QHRGADAENVLIEDLRTCSVKPDAEQ--RDRRFCFEIISP-TKSYLLQAESEKD 356 (785)
T ss_pred ccchhhHHhhhhhhhcccccc-----ccccccccccccccchhccccCCccc--ccceeeEEEecC-CcceEEecCchhH
Confidence 345788999999999988887 54443333377889999999888653 368999999985 5899999999999
Q ss_pred HHHHHHHHHHhHhh
Q psy407 93 MIQWMNALSLASIL 106 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~ 106 (160)
.++||.+|+..+..
T Consensus 357 ~~~Wi~~i~nsi~s 370 (785)
T KOG0521|consen 357 CQDWISALQNSILS 370 (785)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 45
>KOG3531|consensus
Probab=98.67 E-value=6.6e-09 Score=95.56 Aligned_cols=83 Identities=19% Similarity=0.430 Sum_probs=75.8
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
...|+|-|+|+...||++ ||+-++..++.+++|-|++|.+-...++..|.|+|++...+ ..|+|+||+.-..++
T Consensus 937 ssgwqkLwvvft~fcl~f-----yKS~qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~-hvyffraes~yt~~r 1010 (1036)
T KOG3531|consen 937 SSGWQKLWVVFTNFCLFF-----YKSHQDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKS-HVYFFRAESYYTFER 1010 (1036)
T ss_pred cccceeeeeeecceeeEe-----ecccccccccccccccccccCCCCCCCCcchhheeeeehhh-hHHHHhhhhhhhhhh
Confidence 448999999999999999 99999999999999999999887666778999999998865 579999999999999
Q ss_pred HHHHHHHhH
Q psy407 96 WMNALSLAS 104 (160)
Q Consensus 96 Wi~aL~~a~ 104 (160)
||.+|+.|.
T Consensus 1011 w~evi~~a~ 1019 (1036)
T KOG3531|consen 1011 WMEVITDAP 1019 (1036)
T ss_pred HHHHhhcCC
Confidence 999999874
No 46
>KOG1090|consensus
Probab=98.60 E-value=1.8e-08 Score=94.26 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=68.2
Q ss_pred CCCCCCceEEEEEEe--CCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCC
Q psy407 13 NMASTLCHNVYLLLA--THVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADT 89 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~--~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aes 89 (160)
.-..|.||.|||||. .+.|+| |.+.++++|.|.|.|.+.+ |....++. ..++--|.+.+. .|+|-|+|+|
T Consensus 1644 GA~lK~Wk~RwFVLd~~khqlrY-----Yd~~edt~pkG~IdLaevesv~~~~~k~-vdekgffdlktt-~rvynf~a~n 1716 (1732)
T KOG1090|consen 1644 GAKLKLWKPRWFVLDPDKHQLRY-----YDDFEDTKPKGCIDLAEVESVALIGPKT-VDEKGFFDLKTT-NRVYNFCAQN 1716 (1732)
T ss_pred chhhcccccceeEecCCccceee-----ecccccccccchhhhhhhhhhcccCccc-cCccceeeeehh-hHHHHHHhcc
Confidence 344678999999998 469999 9999999999999998864 44433332 345556888765 5899999999
Q ss_pred HHHHHHHHHHHHHhH
Q psy407 90 RESMIQWMNALSLAS 104 (160)
Q Consensus 90 e~e~~~Wi~aL~~a~ 104 (160)
....++|+..|+.+.
T Consensus 1717 in~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1717 INLAQQWVECIQSCL 1731 (1732)
T ss_pred chHHHHHHHHHHHhh
Confidence 999999999999864
No 47
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.59 E-value=4.2e-07 Score=65.25 Aligned_cols=73 Identities=19% Similarity=0.295 Sum_probs=53.7
Q ss_pred ceEEEEEEeCC-eEEEcccCCCCCCccCccceEEEcCC-eEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy407 19 CHNVYLLLATH-VMVFSPEISGLGFEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 96 (160)
Q Consensus 19 WkkRWFVL~~~-~L~y~~~~yYk~~~e~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~W 96 (160)
.|+|||+|++. .|+| -++.....+|.|+++. .+|+..+.. .|.|.++ .|+|+|.. .+.+..+|
T Consensus 27 ~kkR~liLTd~PrL~Y------vdp~~~~~KGeI~~~~~l~v~~k~~~-------~F~I~tp-~RtY~l~d-~~~~A~~W 91 (104)
T PF14593_consen 27 AKKRQLILTDGPRLFY------VDPKKMVLKGEIPWSKELSVEVKSFK-------TFFIHTP-KRTYYLED-PEGNAQQW 91 (104)
T ss_dssp EEEEEEEEETTTEEEE------EETTTTEEEEEE--STT-EEEECSSS-------EEEEEET-TEEEEEE--TTS-HHHH
T ss_pred EEEEEEEEccCCEEEE------EECCCCeECcEEecCCceEEEEccCC-------EEEEECC-CcEEEEEC-CCCCHHHH
Confidence 99999999987 7775 4566677899999986 466665432 7999888 58999988 66668899
Q ss_pred HHHHHHhHhh
Q psy407 97 MNALSLASIL 106 (160)
Q Consensus 97 i~aL~~a~~~ 106 (160)
+++|..+...
T Consensus 92 ~~~I~~~~~~ 101 (104)
T PF14593_consen 92 VEAIEEVKKQ 101 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987643
No 48
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.55 E-value=6.2e-07 Score=65.23 Aligned_cols=82 Identities=13% Similarity=0.218 Sum_probs=63.1
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCe-EEEecCCC--CccCceeeEEEeeCCceEEEEEcC----
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSY-KISPCSSD--DKVFRKFSFKAEHANMRTYYFAAD---- 88 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~-~V~~~~~~--~~~~~~~~F~i~~~~~r~~~l~Ae---- 88 (160)
-+.|||+|++|+..+|.+ |+++...++.-.|+|.+. .|...... ......|+|+|.+. ..+||...+
T Consensus 13 d~~rKRhYWrLDsK~Itl-----f~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~-~~vY~VG~~~~~~ 86 (117)
T cd01239 13 DNRRKKHYWRLDSKAITL-----YQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIRTT-TNVYFVGGEDYHA 86 (117)
T ss_pred ccceeeeEEEecCCeEEE-----EEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEEec-CEEEEeccccccc
Confidence 378999999999999999 999999999999999885 45543221 11257899999985 478988664
Q ss_pred ----------------CHHHHHHHHHHHHHh
Q psy407 89 ----------------TRESMIQWMNALSLA 103 (160)
Q Consensus 89 ----------------se~e~~~Wi~aL~~a 103 (160)
..+..+-|-.||++|
T Consensus 87 ~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 87 FSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred CCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 234557888888875
No 49
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.42 E-value=8.9e-06 Score=58.82 Aligned_cols=94 Identities=19% Similarity=0.129 Sum_probs=68.8
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCC----ccCccceEEEcCCeEEEecCCCCc----cCceeeEE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGF----EEEKLLGSILLPSYKISPCSSDDK----VFRKFSFK 74 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~----~e~~~~g~I~L~~~~V~~~~~~~~----~~~~~~F~ 74 (160)
|.|=|+++....|. =+.|.|-|-|+.|.| =|.. ..-..+|.|+|..|.|..+++.+. ..-+++|+
T Consensus 4 ~~Gel~~~s~~~g~--~q~R~~FLFD~~LI~-----CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafk 76 (109)
T cd01224 4 LQGEATRQKQNKGW--NSSRVLFLFDHQMVL-----CKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLK 76 (109)
T ss_pred EeeeEEEEecccCC--cccEEEEEecceEEE-----EecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEE
Confidence 55666666643222 236888888888887 5632 124578999999999988765321 12478999
Q ss_pred EeeCC-ceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 75 AEHAN-MRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 75 i~~~~-~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
|.+.. ...|.|+|.|.++..+||+||..-
T Consensus 77 l~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~e 106 (109)
T cd01224 77 IYSESTDEWYLFSFKSAERKHRWLSAFALE 106 (109)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHHHHHHHh
Confidence 98754 578999999999999999999763
No 50
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.39 E-value=7.1e-07 Score=78.34 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=59.5
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCC-CCcc-CccceEEEcCCe-EEEecCCCCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGL-GFEE-EKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk-~~~e-~~~~g~I~L~~~-~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
+.|+|.... ....|++|||.+.++.+.. .|+ +++. ......++|... .|.++......+++++|.|.+.+
T Consensus 379 ~~G~l~k~~---~~~~wk~ry~~l~~~~l~~----~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~ 451 (478)
T PTZ00267 379 HGGYLYKYS---SDMRWKKRYFYIGNGQLRI----SLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNN 451 (478)
T ss_pred cceEEeccC---CCcchhhheEEecCCceEE----EeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecC
Confidence 445555442 2336999999999776655 133 2221 222233334221 13333211123678899997766
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 80 MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.+.++|.|+|++++.+||.+|+.|.
T Consensus 452 ~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 452 GQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHh
Confidence 6789999999999999999999985
No 51
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.35 E-value=2e-06 Score=62.15 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=62.4
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCcc-----CccceEEEcC--CeEEEecCC-CC-ccCceeeEEEeeCCc-eEEE
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEE-----EKLLGSILLP--SYKISPCSS-DD-KVFRKFSFKAEHANM-RTYY 84 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-----~~~~g~I~L~--~~~V~~~~~-~~-~~~~~~~F~i~~~~~-r~~~ 84 (160)
+.+.||.||++|++..|+. |+..-- .+|....+|- -+++....+ .+ ..++.++|.|.+... .+.+
T Consensus 15 ~~~~wrP~F~aL~~~dl~l-----y~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irtg~~vesh~ 89 (108)
T cd01258 15 SSQRWRPRFLALKGSEFLF-----FETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRTGTQVENHY 89 (108)
T ss_pred cccccceEEEEEcCCcEEE-----EeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEcCCceeeEE
Confidence 4588999999999999888 876543 4566666766 344322221 11 126789999998776 8999
Q ss_pred EEcCCHHHHHHHHHHHHH
Q psy407 85 FAADTRESMIQWMNALSL 102 (160)
Q Consensus 85 l~Aese~e~~~Wi~aL~~ 102 (160)
|+.|+..|+..|..||.+
T Consensus 90 fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 90 LRVETHRDLASWERALVR 107 (108)
T ss_pred EEecCHHHHHHHHHHHhc
Confidence 999999999999999975
No 52
>KOG3751|consensus
Probab=98.34 E-value=1.7e-06 Score=76.63 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=56.8
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccce---EEEcCCeEEEe--cCCC---CccCceeeEEEe
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLG---SILLPSYKISP--CSSD---DKVFRKFSFKAE 76 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g---~I~L~~~~V~~--~~~~---~~~~~~~~F~i~ 76 (160)
||| ++|.- |-|.|||.||||+...|||+ -..+..+++. ..+|.+-.|-. ...+ .+..-.|+||..
T Consensus 321 GfL-~~K~d-gkKsWKk~yf~LR~SGLYys-----~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~ 393 (622)
T KOG3751|consen 321 GFL-YLKED-GKKSWKKHYFVLRRSGLYYS-----TKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPN 393 (622)
T ss_pred cee-eeccc-ccccceeEEEEEecCcceEc-----cCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeec
Confidence 444 44443 44789999999999999994 3333333332 23444433332 1110 011223455543
Q ss_pred e---CCceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 77 H---ANMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 77 ~---~~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
- ...--=+|+||++..+..|+.|||.+..+
T Consensus 394 ~~~~~~r~lk~lCAEDe~t~~~WltAiRl~KyG 426 (622)
T KOG3751|consen 394 KLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKYG 426 (622)
T ss_pred cccCcccceeeeecccchhHHHHHHHHHHHHHH
Confidence 2 11223489999999999999999998765
No 53
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.28 E-value=1.2e-05 Score=57.27 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=55.7
Q ss_pred EEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy407 23 YLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 23 WFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
.|.+.| +|.| +....+..-+....++|.+..|..+.+.+ .-+++|+|.++. +++.++|+|.++..+||..|..
T Consensus 24 ~FLfND-~Lvv---a~~~~~~ky~~~~~~~L~~i~V~ni~D~~--~~kNafki~t~~-~s~i~qaes~~~K~eWl~~le~ 96 (100)
T cd01226 24 LFLLND-RLIV---GNINAAGKYVMESTYSLNSVAVVNVKDRE--NAKKVLKLLIFP-ESRIYQCESARIKTEWFEELEQ 96 (100)
T ss_pred EEEecc-EEEE---EEecccceEEEEEEEehHHeEEEecCCCc--CcCceEEEEeCC-ccEEEEeCCHHHHHHHHHHHHH
Confidence 455555 4444 12223333557788999998887776543 458899999875 6899999999999999999999
Q ss_pred hH
Q psy407 103 AS 104 (160)
Q Consensus 103 a~ 104 (160)
|.
T Consensus 97 a~ 98 (100)
T cd01226 97 AK 98 (100)
T ss_pred Hh
Confidence 85
No 54
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.22 E-value=7.5e-06 Score=59.21 Aligned_cols=80 Identities=13% Similarity=0.170 Sum_probs=63.3
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCC-C--ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLG-F--EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESM 93 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~-~--~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~ 93 (160)
..=+.||+||-.++|.+ .+- + ..-...|.++|.+.+|....+.+ +.+++|+|..+-.....+.|.+.+|+
T Consensus 26 qe~~eRyLvLFp~~Lli-----lS~s~r~sGf~yqGkLPL~~i~v~~lEd~e--~~~~aFeI~G~li~~i~v~C~~~~e~ 98 (111)
T cd01225 26 EEKRERYLVLFPNVLLM-----LSASPRMSGFIYQGKLPLTGIIVTRLEDTE--ALKNAFEISGPLIERIVVVCNNPQDA 98 (111)
T ss_pred cccceeEEEEcCceEEE-----EEcCCCccceEEeeeecccccEEechHhcc--CccceEEEeccCcCcEEEEeCCHHHH
Confidence 34567999999999887 443 2 22457799999999988765432 66899999877656799999999999
Q ss_pred HHHHHHHHHh
Q psy407 94 IQWMNALSLA 103 (160)
Q Consensus 94 ~~Wi~aL~~a 103 (160)
.+||..|+.-
T Consensus 99 ~~Wl~hL~~~ 108 (111)
T cd01225 99 QEWVELLNAN 108 (111)
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 55
>KOG0932|consensus
Probab=98.21 E-value=1.1e-06 Score=78.59 Aligned_cols=86 Identities=17% Similarity=0.274 Sum_probs=61.8
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCcc-------CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEc
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEE-------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
|-+.||.-|-||++..||+ -|++-- ......|.+--.-.+++.+ =.+|+|+|++.+.+-|.|.|+|
T Consensus 528 GkRgWk~fya~LkG~vLYl-----qkDey~p~kalse~~lknavsvHHALAt~Atd--Y~KKp~Vf~lrtAdwrv~LFQa 600 (774)
T KOG0932|consen 528 GKRGWKMFYAVLKGMVLYL-----QKDEYKPGKALSESDLKNAVSVHHALATPATD--YSKKPHVFKLRTADWRVFLFQA 600 (774)
T ss_pred cchhHHHHHHHHhhheEEe-----eccccCcccchhhhhhhhhhhhhhhhcCCCcc--cccCCceEEEEeccceeEEEeC
Confidence 3456999999999999998 443211 1133333332222223322 2478999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhHhhc
Q psy407 88 DTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~~~~ 107 (160)
.+.+||+.||..|+.++..-
T Consensus 601 ps~eEmqsWi~rIN~vAA~f 620 (774)
T KOG0932|consen 601 PSQEEMQSWIERINLVAAAF 620 (774)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987554
No 56
>PLN02866 phospholipase D
Probab=98.15 E-value=1.3e-05 Score=76.27 Aligned_cols=81 Identities=17% Similarity=0.237 Sum_probs=63.1
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC-e--------EEEecCC-CCccCceeeEEEeeCCceEEEEEc
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS-Y--------KISPCSS-DDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~-~--------~V~~~~~-~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
.|.||||||++.+|.| .+++.+.+++..|.+.- . .|..... .+...-+|.|+|... .|+..|.|
T Consensus 217 ~w~k~w~v~k~~~l~~-----~~~p~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~i~~~-~r~l~l~~ 290 (1068)
T PLN02866 217 NWQKVWAVLKPGFLAL-----LEDPFDAKPLDIIVFDVLPASNGNGEGQISLAKEIKERNPLRFGFKVTCG-NRSIRLRT 290 (1068)
T ss_pred chheeEEEEeccEEEE-----EecCCCCceeEEEEEecccccccCCCcceeecccccccCCCcceEEEecC-ceEEEEEE
Confidence 6999999999999998 88898888888887641 1 2222211 111234789999874 58999999
Q ss_pred CCHHHHHHHHHHHHHhH
Q psy407 88 DTRESMIQWMNALSLAS 104 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~ 104 (160)
.|...+.+|+++|+.+.
T Consensus 291 ~s~~~~~~w~~ai~~~~ 307 (1068)
T PLN02866 291 KSSAKVKDWVAAINDAG 307 (1068)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999999996
No 57
>KOG0690|consensus
Probab=98.05 E-value=2.5e-05 Score=66.87 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=53.9
Q ss_pred CCCCCceEEEEEEe-CCeEEEcccCCCCCC-ccCccceEEEcCCeEEEecCCC-CccCceeeEEEeeCC---ceEEEEEc
Q psy407 14 MASTLCHNVYLLLA-THVMVFSPEISGLGF-EEEKLLGSILLPSYKISPCSSD-DKVFRKFSFKAEHAN---MRTYYFAA 87 (160)
Q Consensus 14 ~~~k~WkkRWFVL~-~~~L~y~~~~yYk~~-~e~~~~g~I~L~~~~V~~~~~~-~~~~~~~~F~i~~~~---~r~~~l~A 87 (160)
.-+|.|+.|||+|. ++.|.- |+.. ++..+ ---+|.++.|..+..- ...-|++.|-|..-. --.-.|.+
T Consensus 26 E~IknWRpRYF~l~~DG~~~G-----yr~kP~~~~~-~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF~v 99 (516)
T KOG0690|consen 26 EHIKNWRPRYFLLFNDGTLLG-----YRSKPKEVQP-TPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTVIERTFYV 99 (516)
T ss_pred hhhhcccceEEEEeeCCceEe-----eccCCccCCC-CcccccchhhhhhhhhhccCCCCceEEEEeeeeeeeeeeeeec
Confidence 34688999999998 566666 6643 33221 1245555555443320 001467788775321 12235679
Q ss_pred CCHHHHHHHHHHHHHhHh
Q psy407 88 DTRESMIQWMNALSLASI 105 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~~ 105 (160)
++.+++++|+.||+..+.
T Consensus 100 es~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 100 ESAEERQEWIEAIQAVSN 117 (516)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999999999874
No 58
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.99 E-value=0.00021 Score=52.45 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=57.9
Q ss_pred EEEEecCC---CCCCceEEEEEEeC--CeEEEcccCCCCC-CccC----ccceEEEcCCeE-EEecCCCCccC----cee
Q psy407 7 LIILNDNM---ASTLCHNVYLLLAT--HVMVFSPEISGLG-FEEE----KLLGSILLPSYK-ISPCSSDDKVF----RKF 71 (160)
Q Consensus 7 ~~~~~~~~---~~k~WkkRWFVL~~--~~L~y~~~~yYk~-~~e~----~~~g~I~L~~~~-V~~~~~~~~~~----~~~ 71 (160)
|.....+. +.+..++|||-|.. .+|++ ... +... .-.+.|.|.+.. |.+-....... -.+
T Consensus 15 l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~W-----s~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~ 89 (123)
T PF12814_consen 15 LYKYTRKGRSGISEKPHRRYFWVDPYTRTLYW-----SSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNK 89 (123)
T ss_pred EEEEcccccCccCCCcEEEEEEEeCCCCEEEe-----cCCCCCccccccccccceEEeeeEEecCCCCCCccccccccce
Confidence 44444444 34589999999996 58887 442 2111 123567777744 22211111111 246
Q ss_pred eEEEeeCCceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 72 SFKAEHANMRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 72 ~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+|.|.++ .|+.-|.|+|.++.+-|+++|+.-
T Consensus 90 si~i~t~-~R~L~l~a~s~~~~~~W~~aL~~L 120 (123)
T PF12814_consen 90 SIIIVTP-DRSLDLTAPSRERHEIWFNALRYL 120 (123)
T ss_pred EEEEEcC-CeEEEEEeCCHHHHHHHHHHHHHH
Confidence 7777765 589999999999999999999864
No 59
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.96 E-value=6.2e-05 Score=52.53 Aligned_cols=79 Identities=16% Similarity=0.252 Sum_probs=58.6
Q ss_pred EecCCCCCCceEEEEEEeCC-eEEEcccCCCCCCccCccceEEEcCC-e-EEEecCCCCccCceeeEEEeeCCceEEEEE
Q psy407 10 LNDNMASTLCHNVYLLLATH-VMVFSPEISGLGFEEEKLLGSILLPS-Y-KISPCSSDDKVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 10 ~~~~~~~k~WkkRWFVL~~~-~L~y~~~~yYk~~~e~~~~g~I~L~~-~-~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~ 86 (160)
++.+.|. .+|+|=++|.+. .|+ |-|+.....+|.|+++. . .|+..+. ..|.|.+|+ |+|+|.
T Consensus 7 v~Kr~gl-f~kkR~LiLTd~PrL~------yvdp~~~~~KgeIp~s~~~l~v~~~~~-------~~F~I~Tp~-rty~le 71 (89)
T cd01262 7 VKKRKGL-FAKKRQLILTNGPRLI------YVDPVKKVVKGEIPWSDVELRVEVKNS-------SHFFVHTPN-KVYSFE 71 (89)
T ss_pred eeehhcc-ccceeeEEEecCceEE------EEcCCcCeEEeEecccccceEEEEecC-------ccEEEECCC-ceEEEE
Confidence 3445555 789999999975 555 45777888999999977 2 3444332 379998775 899994
Q ss_pred cCCHHHHHHHHHHHHHhH
Q psy407 87 ADTRESMIQWMNALSLAS 104 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~ 104 (160)
+-+....+|+.+|..+.
T Consensus 72 -D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 72 -DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred -CCCCCHHHHHHHHHHHh
Confidence 66789999999998763
No 60
>KOG1117|consensus
Probab=97.93 E-value=3e-05 Score=72.33 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=74.0
Q ss_pred ccceEEEEecCCC--------CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecC-CCCc--cCcee
Q psy407 3 HVCFLIILNDNMA--------STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCS-SDDK--VFRKF 71 (160)
Q Consensus 3 ~~~~~~~~~~~~~--------~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~-~~~~--~~~~~ 71 (160)
|.+||-+--..+. -..-.++||||-++.|+| |.++...+|.|.|++....--.+. +++. ..-.|
T Consensus 494 ~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~-----fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f 568 (1186)
T KOG1117|consen 494 LCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSY-----FENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIF 568 (1186)
T ss_pred ccceeeechhhccCCCChhhhcccCCCceEEcCcchhhh-----hhhcCCCCCCceeeccceEEEeecCCCCCCCcCcee
Confidence 3466665544432 123778999999999999 999999999999999884322221 2121 24578
Q ss_pred eEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 72 SFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 72 ~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.|+|..+..|.|.|.+++.+++..|..++.++-
T Consensus 569 ~fE~~l~~er~~~fgle~ad~l~~wt~aiaKhf 601 (1186)
T KOG1117|consen 569 IFEIYLPGERVFLFGLETADALRKWTEAIAKHF 601 (1186)
T ss_pred EEEEeecccceEEeecccHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999998864
No 61
>KOG1739|consensus
Probab=97.93 E-value=2.6e-05 Score=68.78 Aligned_cols=82 Identities=20% Similarity=0.252 Sum_probs=66.0
Q ss_pred CCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHH
Q psy407 14 MASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRE 91 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~ 91 (160)
+-+..|+-|||||+++.|.| |+++.+ .-++|.|.|....|..-.. |. ..|.|... ...+||.|++..
T Consensus 35 nyi~gwqdRyv~lk~g~Lsy-----ykse~E~~hGcRgsi~l~ka~i~ahEf-De----~rfdIsvn-~nv~~lra~~~~ 103 (611)
T KOG1739|consen 35 NYIHGWQDRYVVLKNGALSY-----YKSEDETEHGCRGSICLSKAVITAHEF-DE----CRFDISVN-DNVWYLRAQDPD 103 (611)
T ss_pred cccccccceEEEEcccchhh-----hhhhhhhhcccceeeEeccCCcccccc-hh----heeeeEec-cceeeehhcCcH
Confidence 44568999999999999999 998766 4599999998877766543 22 26888765 457999999999
Q ss_pred HHHHHHHHHHHhHhh
Q psy407 92 SMIQWMNALSLASIL 106 (160)
Q Consensus 92 e~~~Wi~aL~~a~~~ 106 (160)
..+.|+.+|..-...
T Consensus 104 hr~~w~d~L~wmk~e 118 (611)
T KOG1739|consen 104 HRQQWIDALEWMKTE 118 (611)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999986543
No 62
>KOG4424|consensus
Probab=97.91 E-value=8.4e-06 Score=72.99 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=78.1
Q ss_pred cceEEEEecCCCCCCceEEEEEEe---CCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLA---THVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM 80 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~---~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~ 80 (160)
+|+++.+.+. +.+.|++-|++.- +.+++. |..+++......|+|.||.|.+-.........++|++.. ..
T Consensus 499 ~~s~l~~~~~-~~~~g~~a~~~vP~~d~~~~~~-----Yg~~qDv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~-s~ 571 (623)
T KOG4424|consen 499 ICSHLKYMEA-AGKTGILAWSVVPKSDPLVDYS-----YGSPQDVRAQATIPLPGVEVTIPEFVRREDLFHVFKLVQ-SH 571 (623)
T ss_pred ehhhHHHHhh-cCccceeeeeeccCCCCccccc-----cCCccccccccccccCccccCCCcccccchhcchhhhhh-hc
Confidence 5666666666 5578999999886 348887 999999999999999999987543332234566788865 45
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 81 RTYYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
..++|+|++++-.++|+..|..|..+...
T Consensus 572 ~~~~~~a~~~q~qq~wl~~l~~A~~~d~~ 600 (623)
T KOG4424|consen 572 LSWHLAADDEQLQQRWLEVLLLAVSGDLK 600 (623)
T ss_pred ceeeeccCCHHHHHHHHHHHHhhhccccc
Confidence 68999999999999999999999866554
No 63
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.80 E-value=0.00016 Score=66.57 Aligned_cols=98 Identities=7% Similarity=0.162 Sum_probs=69.7
Q ss_pred ceEEEEec-CCCCCCceEEEEEEeCCeEEEcccCCCCCCc--cCccceEEEcCC-eEEEecCCCCc-cCceeeEEEeeC-
Q psy407 5 CFLIILND-NMASTLCHNVYLLLATHVMVFSPEISGLGFE--EEKLLGSILLPS-YKISPCSSDDK-VFRKFSFKAEHA- 78 (160)
Q Consensus 5 ~~~~~~~~-~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~--e~~~~g~I~L~~-~~V~~~~~~~~-~~~~~~F~i~~~- 78 (160)
|-+.-+.. +-|...-++|||||.++.|.| ||.+- ...|+-+..|.+ |.|+..+-+.- -+--|+|.|...
T Consensus 8 GW~y~~g~~kig~~~~~~Ry~vl~~~~~~~-----yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~ 82 (719)
T PLN00188 8 GWMVRYGRRKIGRSYIHMRYFVLESRLLAY-----YKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 82 (719)
T ss_pred eEEEEEcccccccccceeEEEEEecchhhh-----cccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEecCC
Confidence 44445544 344456899999999999999 98632 245666666655 67777654211 123578888753
Q ss_pred -CceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 79 -NMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 79 -~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
..+..-|.|-|.+|..+||.||+.|+.+.
T Consensus 83 ~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 83 EKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred CccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 34678999999999999999999998643
No 64
>KOG3543|consensus
Probab=97.79 E-value=4.6e-06 Score=75.74 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=73.7
Q ss_pred CCccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCcc-CceeeEEEeeCC
Q psy407 1 MDHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKV-FRKFSFKAEHAN 79 (160)
Q Consensus 1 ~~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~-~~~~~F~i~~~~ 79 (160)
|-|.|.|-++.+ +.+|.||||||||-.-.-|-+-.+.|+..+ ..|...|.|.|++|.-.++.+.. +.++-|...- .
T Consensus 464 mkhsgylyaig~-nvwkrwkkrffvlvqvsqytfamcsyrekk-aepqel~qldgytvdytdp~pglqgg~~ffnavk-e 540 (1218)
T KOG3543|consen 464 MKHSGYLYAIGR-NVWKRWKKRFFVLVQVSQYTFAMCSYREKK-AEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVK-E 540 (1218)
T ss_pred cccceeehhhhh-HHHHHhHhhEEEEEEhhhhhhHhhhhhhcc-cChHHHhhccCeeeccCCCCCccccchHHHHHhc-c
Confidence 457777776655 467899999999975433322334466443 46889999999999876553322 3455565543 3
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
..+..|+.++++++.-|+.|+-.|.-+
T Consensus 541 gdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 541 GDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred CceEEeccCchhhhhHHHHHHHHhhCC
Confidence 468999999999999999999999743
No 65
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.77 E-value=0.00017 Score=52.71 Aligned_cols=81 Identities=21% Similarity=0.288 Sum_probs=58.1
Q ss_pred ceEEEEEEeCCeEEEcccCCCCCCcc------CccceEEEcCCeEEEecCCCCcc----CceeeEEEeeCC-ceEEEEEc
Q psy407 19 CHNVYLLLATHVMVFSPEISGLGFEE------EKLLGSILLPSYKISPCSSDDKV----FRKFSFKAEHAN-MRTYYFAA 87 (160)
Q Consensus 19 WkkRWFVL~~~~L~y~~~~yYk~~~e------~~~~g~I~L~~~~V~~~~~~~~~----~~~~~F~i~~~~-~r~~~l~A 87 (160)
=+.|+.-|-+..|.. -|...+ -..+..+.|..+.|+.....|+. .-+|+|.|.+.+ ...|.|.|
T Consensus 20 ~k~RyiFLFDk~lI~-----CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~~~~~~~~~f~~ 94 (116)
T cd01223 20 TKLRYIFLFDKAVIV-----CKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAHKQGKTGFTFYF 94 (116)
T ss_pred CceeEEEEecceEEE-----EEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEecCCCccEEEEe
Confidence 457886666665544 343222 34667788889888875432322 467899998754 36899999
Q ss_pred CCHHHHHHHHHHHHHhH
Q psy407 88 DTRESMIQWMNALSLAS 104 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~ 104 (160)
-|+++...||.+|..|.
T Consensus 95 Ktee~K~kWm~al~~a~ 111 (116)
T cd01223 95 KTEHLRKKWLKALEMAM 111 (116)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999999985
No 66
>KOG0248|consensus
Probab=97.76 E-value=1.3e-05 Score=73.23 Aligned_cols=83 Identities=14% Similarity=0.185 Sum_probs=64.9
Q ss_pred CCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCC-eEEEecCCCCccCceeeEEEeeCCceEEEEEcCCH
Q psy407 14 MASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTR 90 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese 90 (160)
.-.|.|+||||||+.+.+.| |+.+.+ ..+.+.|.++. |.+... .-.+.|.++.. ..+|+|-++++
T Consensus 260 s~~k~lkrr~~v~k~gqi~~-----y~~~~~~~~~p~s~~d~~s~~~~~~~------~~s~~fqli~~-t~~~~~~~~s~ 327 (936)
T KOG0248|consen 260 SRIKSLKRRYVVFKNGQISF-----YRKHNNRDEEPASKIDIRSVTKLEQQ------GAAYAFQLITS-TDKMNFMTESE 327 (936)
T ss_pred HHHHHHHhHheeeccceEEE-----EEcCCCccccccCcccccccceeecc------chhHHhhhhhh-ceeEEEeccCh
Confidence 33567999999999999988 876554 67999999966 443333 22457888754 57899999999
Q ss_pred HHHHHHHHHHHHhHhhcc
Q psy407 91 ESMIQWMNALSLASILQN 108 (160)
Q Consensus 91 ~e~~~Wi~aL~~a~~~~~ 108 (160)
--..+|++.|..+++.+.
T Consensus 328 ~lt~dw~~iL~~~iKv~~ 345 (936)
T KOG0248|consen 328 RTTHDWVTILSAAIKATT 345 (936)
T ss_pred hhhhhhHHHHHHHHHHHh
Confidence 999999999999988753
No 67
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.75 E-value=0.00032 Score=49.69 Aligned_cols=76 Identities=13% Similarity=0.145 Sum_probs=55.4
Q ss_pred eEEEEEEeCCeEEEcccCCCCCCc-cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC--ceEEEEEcCCHHHHHHH
Q psy407 20 HNVYLLLATHVMVFSPEISGLGFE-EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN--MRTYYFAADTRESMIQW 96 (160)
Q Consensus 20 kkRWFVL~~~~L~y~~~~yYk~~~-e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~--~r~~~l~Aese~e~~~W 96 (160)
+.|++-|-+..|.| -|-.. .-..+..|.+.+..|..-.+.| +++|.|.+.+ .+.|.|+|.|.++.+.|
T Consensus 17 ~eR~vFLFe~~ll~-----~K~~~~~y~~K~~i~~~~l~i~e~~~~d----~~~F~v~~~~~p~~~~~l~A~s~e~K~~W 87 (97)
T cd01222 17 KPRLLFLFQTMLLI-----AKPRGDKYQFKAYIPCKNLMLVEHLPGE----PLCFRVIPFDDPKGALQLTARNREEKRIW 87 (97)
T ss_pred CceEEEEecccEEE-----EEecCCeeEEEEEEEecceEEecCCCCC----CcEEEEEecCCCceEEEEEecCHHHHHHH
Confidence 35777777776665 33222 2457788999998876643332 5789997642 25899999999999999
Q ss_pred HHHHHHhH
Q psy407 97 MNALSLAS 104 (160)
Q Consensus 97 i~aL~~a~ 104 (160)
|++|+.+.
T Consensus 88 ~~~i~~~i 95 (97)
T cd01222 88 TQQLKRAM 95 (97)
T ss_pred HHHHHHHh
Confidence 99999875
No 68
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.74 E-value=0.00014 Score=51.88 Aligned_cols=83 Identities=13% Similarity=0.183 Sum_probs=56.9
Q ss_pred CCCCCceEEEEEEeC----CeEEEcccCCCCC--CccCccceEEEcCCeE-EEecC-CCCccCceeeEEEeeCCceEEEE
Q psy407 14 MASTLCHNVYLLLAT----HVMVFSPEISGLG--FEEEKLLGSILLPSYK-ISPCS-SDDKVFRKFSFKAEHANMRTYYF 85 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~----~~L~y~~~~yYk~--~~e~~~~g~I~L~~~~-V~~~~-~~~~~~~~~~F~i~~~~~r~~~l 85 (160)
.|...|+|.=.+|+. ..|.+ |.- ++..+|+-.|....+. |.... .+- ..+.+.|.|...+...|+|
T Consensus 16 ~~~~~WqkcRl~L~~~~gg~~le~-----~~~~pPKssrpk~~v~C~~I~EvR~tt~LEm-PD~~nTFvLK~~~~~eyI~ 89 (107)
T cd01231 16 DSGARWQRGRLVLRKAVGGYMLEF-----YLPLPPKSSKPKLQVACSSISEVRECTRLEM-PDNLYTFVLKVDDNTDIIF 89 (107)
T ss_pred CCccccceeeEEEEecCCCceEEE-----EccCCCCCCCCccccchhhhhhhhhcccccc-cCcccEEEEEecCCceEEE
Confidence 455579999998873 34444 443 6777888777654421 22211 111 1456788887766779999
Q ss_pred EcCCHHHHHHHHHHHHH
Q psy407 86 AADTRESMIQWMNALSL 102 (160)
Q Consensus 86 ~Aese~e~~~Wi~aL~~ 102 (160)
-|.++++|+.||+.|+.
T Consensus 90 Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 90 EVGDEQQLNSWLAELRY 106 (107)
T ss_pred EcCCHHHHHHHHHHHhc
Confidence 99999999999999985
No 69
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.71 E-value=0.00048 Score=51.02 Aligned_cols=93 Identities=16% Similarity=0.220 Sum_probs=55.9
Q ss_pred ceEEEEecCCCCC------CceEEEEEEeCCeEEEcccCCCCCCccCc--cceEEEcCCeEEEecCCCCc--------cC
Q psy407 5 CFLIILNDNMAST------LCHNVYLLLATHVMVFSPEISGLGFEEEK--LLGSILLPSYKISPCSSDDK--------VF 68 (160)
Q Consensus 5 ~~~~~~~~~~~~k------~WkkRWFVL~~~~L~y~~~~yYk~~~e~~--~~g~I~L~~~~V~~~~~~~~--------~~ 68 (160)
|=|+.+....... .-+.+|+.|-..+|.| -|...+.+ .....+...+.|+.+..... ..
T Consensus 7 GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~-----tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~ 81 (125)
T cd01221 7 GELTQLEERGSSNILRKKLKARTIYLFLFNDLLLI-----TKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVG 81 (125)
T ss_pred eeEEEEeccCCcchhcccccCCcEEEEEecceEEE-----EEecCCCeEEEEeeccccceEEeecccccccccccccccC
Confidence 4566665543332 2456788888877776 55433221 21222334444554432111 13
Q ss_pred ceeeEEEe-----eCCceEEEEEcCCHHHHHHHHHHHHH
Q psy407 69 RKFSFKAE-----HANMRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 69 ~~~~F~i~-----~~~~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
.++.|.|+ ....+++.|+|+|+.|+.+||.||.-
T Consensus 82 ~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~~ 120 (125)
T cd01221 82 RPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALAP 120 (125)
T ss_pred CCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcCC
Confidence 57889985 23457899999999999999999853
No 70
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.59 E-value=0.00015 Score=64.31 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=34.3
Q ss_pred CceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 68 FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 68 ~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+.+|+|.+...+.+.++|.|.+++++..||.+|+++.
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (496)
T PTZ00283 453 NAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVL 489 (496)
T ss_pred CCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhc
Confidence 5799999988778999999999999999999999985
No 71
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.52 E-value=0.00038 Score=49.09 Aligned_cols=82 Identities=17% Similarity=0.188 Sum_probs=56.2
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCC----C-ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLG----F-EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~----~-~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
|||+.+-++ .=|.|-|-|-+..|.| ..|+. . ..-+....|+|.+..+..+ .|++.+..
T Consensus 7 g~lvel~~~----~rK~R~~FLFnDlLvc---~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~----------~~~~~~~~ 69 (96)
T cd01228 7 SFLVELVEG----SRKLRHLFLFTDVLLC---AKLKKTSRGKHQQYDCKWYIPLADLSFPSE----------PFRIHNKN 69 (96)
T ss_pred ceeeeehhC----CCcceEEEeeccEEEE---EEeeeccCccccccceeEEEEhHHheecch----------hhhccccC
Confidence 677766643 3355666666665655 23431 1 2245677899999776555 25665555
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
.++|.|.|.|..|..+||.+|..-
T Consensus 70 ~KSf~~~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 70 GKSYTFLLSSDYERSEWRESIQKL 93 (96)
T ss_pred CceEEEEecCHHHHHHHHHHHHHH
Confidence 789999999999999999999763
No 72
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.40 E-value=0.00051 Score=49.58 Aligned_cols=57 Identities=21% Similarity=0.225 Sum_probs=40.5
Q ss_pred CCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy407 39 GLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 39 Yk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
-|.+....|-|.|+|.+.+ .+..+ ...+|.|++ .+ ....|.|.|..|+..||.+|..
T Consensus 55 ~K~~dka~P~GiinLadas--e~~~~--g~~kF~f~~--~G-~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 55 SKAEDKASPSGIINLADAS--EPEKD--GSNKFHFKI--KG-HKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred eccccccCCcceEehhhcc--ccccC--CCceEEEEe--CC-ceeeeecCCHHHhccHHHHhhc
Confidence 4433346799999998833 32221 145777877 23 5689999999999999999863
No 73
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=97.34 E-value=0.0004 Score=50.22 Aligned_cols=82 Identities=11% Similarity=0.037 Sum_probs=58.8
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-CCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
..|++|||-|-.+-|-+ |....+ .....|.+... ..+.. ....+...|+.|...+.+.|+|.++++-+..+
T Consensus 18 s~WQ~Ry~~LfPNRLE~-----~~~~~~-~~~eLi~M~~i--~~V~~e~~~iK~~~CI~ik~k~~~k~vlt~~d~i~l~q 89 (116)
T cd01240 18 SQWQTRYFKLYPNRLEL-----YGESEA-NKPELITMDQI--EDVSVEFQQIKEENCILLKIRDEKKIVLTNSDEIELKQ 89 (116)
T ss_pred HHHHHHHheeCcceeee-----cccccc-cCCcEEEeehh--hhcchhheeeccCceEEEEEcCCceEEEecCCcHHHHH
Confidence 35999999999999997 644333 34455665552 22221 11124556888887777889999999999999
Q ss_pred HHHHHHHhHhh
Q psy407 96 WMNALSLASIL 106 (160)
Q Consensus 96 Wi~aL~~a~~~ 106 (160)
|...|+.|-+.
T Consensus 90 W~~elr~a~r~ 100 (116)
T cd01240 90 WKKELRDAHRE 100 (116)
T ss_pred HHHHHHHHHHH
Confidence 99999998643
No 74
>KOG1738|consensus
Probab=97.27 E-value=2.6e-05 Score=70.49 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=49.4
Q ss_pred CccceEEEEecCCC-CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC
Q psy407 2 DHVCFLIILNDNMA-STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS 63 (160)
Q Consensus 2 ~~~~~~~~~~~~~~-~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~ 63 (160)
|.+|.|+-++++.. ...|+|-||||++..|+. |.+++...+.++|.|.+++|..+.+
T Consensus 563 ~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~-----y~n~~~~~~e~~i~l~~~~i~~a~e 620 (638)
T KOG1738|consen 563 DRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLN-----YRNHRVRAAESVIKLPLFTISVAEE 620 (638)
T ss_pred hhhccchhhccchHHHHHhhhheeeecCchhhh-----hhhhhhhchhheeeccchhhhhHHH
Confidence 67788888888733 335999999999999999 9999999999999999999988755
No 75
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.12 E-value=0.011 Score=43.14 Aligned_cols=93 Identities=8% Similarity=0.144 Sum_probs=56.2
Q ss_pred ceEEEEecCCC-CCCceEEEEEEeCCeEEEcccCCCCCCcc--------CccceEEEcCCeEEEecCCCCccCceeeEEE
Q psy407 5 CFLIILNDNMA-STLCHNVYLLLATHVMVFSPEISGLGFEE--------EKLLGSILLPSYKISPCSSDDKVFRKFSFKA 75 (160)
Q Consensus 5 ~~~~~~~~~~~-~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i 75 (160)
+-++....+.+ .+.=+.|-+-|-+..|.| -|-..+ -..+..|.|....++.....|+ .+|.+.+
T Consensus 9 ~~f~v~~~~~~~~~K~~eR~vFLFe~~lvf-----sk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v~gd~--~kF~i~~ 81 (114)
T cd01232 9 DTFQVWDPKAGLIQKGRERRVFLFEQSIIF-----AKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHVEGDP--CRFALWS 81 (114)
T ss_pred ccEEEEeCCccccCCCceeEEEEeeceEEE-----EEEeccCCCCCceeEEEecceeeeeeEeEEccCCCC--ceEEEEe
Confidence 34455555432 223344555555555555 221111 2245788898888877544332 3444444
Q ss_pred eeCC--ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 76 EHAN--MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 76 ~~~~--~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..+. ..+|.|+|.|.++.+.||..|+.+.
T Consensus 82 ~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il 112 (114)
T cd01232 82 GDPPISDNRIILKANSQETKQEWVKKIREIL 112 (114)
T ss_pred CCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 4332 3689999999999999999999863
No 76
>KOG4807|consensus
Probab=97.01 E-value=4.3e-06 Score=72.21 Aligned_cols=78 Identities=19% Similarity=0.317 Sum_probs=64.8
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
-.|++.||||.+..+.| |.++.. ....|.|.|.+|+ |..+. ..+.|.|.|-+.+ ..|.|.|.+.--
T Consensus 33 ~~~~k~~~~~~~~~~~~-----~~d~~A~~~~~L~~~~~LR~C~~v~e~a----~q~nY~~~i~~~~-~~~tL~~~~s~I 102 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKY-----YRDSTAEEADELDGEIDLRSCTDVTEYA----VQRNYGFQIHTKD-AVYTLSAMTSGI 102 (593)
T ss_pred HHHHHHHHHHhHHHHHH-----HHHHHHHhcccCCccccHHHHHHHHHHH----HHhccceeecccc-hhhhhHHHHHHH
Confidence 36999999999999998 887654 5688999999997 44443 2788999997654 689999999999
Q ss_pred HHHHHHHHHHhH
Q psy407 93 MIQWMNALSLAS 104 (160)
Q Consensus 93 ~~~Wi~aL~~a~ 104 (160)
+..|+.|+++..
T Consensus 103 r~~~~~A~~kT~ 114 (593)
T KOG4807|consen 103 RRNWIEALRKTV 114 (593)
T ss_pred HHHHHHHHHhcc
Confidence 999999999754
No 77
>KOG1117|consensus
Probab=96.97 E-value=0.0028 Score=59.63 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=63.2
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccC--ceeeEEEeeCCceEEEEEcCCHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVF--RKFSFKAEHANMRTYYFAADTRESMI 94 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~--~~~~F~i~~~~~r~~~l~Aese~e~~ 94 (160)
..++-|||+|+++||.. ||+.+..+....-+|.+.++-.. .+.+.+ ..+.|.++... ..+||+|++..++.
T Consensus 1049 ~~fqdryfilng~~l~l-----yke~KssKhek~wpl~s~k~Y~G-vkkklKpPt~wg~T~i~ek-hh~~l~cd~s~~~~ 1121 (1186)
T KOG1117|consen 1049 NKFQDRYFILNGGCLFL-----YKEVKSSKHEKEWPLSSMKVYLG-VKKKLKPPTSWGFTAISEK-HHWYLCCDSSSEQT 1121 (1186)
T ss_pred CccceEEEEecCcEEEE-----eehhhccccccccccccceEEec-cccccCCCCccceeeeeec-ceEEEecCCccccc
Confidence 46999999999999999 99988877677788888776542 221222 23577777655 46999999999999
Q ss_pred HHHHHHHHhH
Q psy407 95 QWMNALSLAS 104 (160)
Q Consensus 95 ~Wi~aL~~a~ 104 (160)
+|+..+-.|-
T Consensus 1122 ewfts~fkaq 1131 (1186)
T KOG1117|consen 1122 EWFTSIFKAQ 1131 (1186)
T ss_pred hhhhhhhhhh
Confidence 9999998874
No 78
>KOG3723|consensus
Probab=96.87 E-value=0.00039 Score=62.85 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=58.2
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCcc-CccceEEEcCCeE-EEecCCCC-ccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEE-EKLLGSILLPSYK-ISPCSSDD-KVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-~~~~g~I~L~~~~-V~~~~~~~-~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
+|.|+-|||.|.+-.|.| -|.... ..-.-.|+|.... |..+.... ..+-+-.|+|-+.+ ++|+|.|.+++.
T Consensus 751 ~kRW~TrYFTLSgA~L~~-----~kg~s~~dS~~~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD-~T~ILKaKDeKN 824 (851)
T KOG3723|consen 751 IKRWKTRYFTLSGAQLLF-----QKGKSKDDSDDCPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTAD-KTYILKAKDEKN 824 (851)
T ss_pred hhhhccceEEecchhhhc-----ccCCCCCCCCCCCccHHHhhhHHHHHhhhhhcccchhhheeecC-ceEEeecccccC
Confidence 457999999999999997 343221 1222568887643 44343110 00123379998876 689999999999
Q ss_pred HHHHHHHHHHhHhh
Q psy407 93 MIQWMNALSLASIL 106 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~ 106 (160)
.++|+.-|.-|...
T Consensus 825 AEEWlqCL~IavAH 838 (851)
T KOG3723|consen 825 AEEWLQCLNIAVAH 838 (851)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887643
No 79
>KOG2070|consensus
Probab=96.56 E-value=0.01 Score=53.01 Aligned_cols=77 Identities=13% Similarity=0.246 Sum_probs=57.7
Q ss_pred ceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 19 CHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 19 WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
=+.|||+|-.+.|.+ +.-... .--.|.+++.|+.|....+.+ ..+..|.|...--......|+++.+.++
T Consensus 325 ~~dRy~~LF~~~llf-----lsvs~rMs~fIyegKlp~tG~iV~klEdte--~~~nafeis~~ti~rIv~~c~~~~~l~~ 397 (661)
T KOG2070|consen 325 EKDRYLLLFPNVLLF-----LSVSPRMSGFIYEGKLPTTGMIVTKLEDTE--NHRNAFEISGSTIERIVVSCNNQQDLQE 397 (661)
T ss_pred hhhheeeeccceeee-----eEeccccchhhhccccccceeEEeehhhhh--cccccccccccchhheeeccCChHHHHH
Confidence 458999999887776 443222 234578999999988875432 4566899976544458899999999999
Q ss_pred HHHHHHH
Q psy407 96 WMNALSL 102 (160)
Q Consensus 96 Wi~aL~~ 102 (160)
|+.+|..
T Consensus 398 wve~ln~ 404 (661)
T KOG2070|consen 398 WVEHLNK 404 (661)
T ss_pred HHHHhhh
Confidence 9999996
No 80
>KOG1737|consensus
Probab=96.53 E-value=0.0015 Score=61.15 Aligned_cols=84 Identities=15% Similarity=0.158 Sum_probs=61.6
Q ss_pred EEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEE
Q psy407 9 ILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 9 ~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~ 86 (160)
.++-..-.+.|.+|||+|.++.|.| |++... ..+.|.|++....|..... ..+.+...+.+.|++.
T Consensus 83 l~k~~n~~~~~~~r~f~l~~g~ls~-----~~~~~~~~~~~~~~~~~~~a~i~~~~~-------~~~~~~~~~~q~~~~~ 150 (799)
T KOG1737|consen 83 LLKWRNYSKGPSSRWFVLSGGLLSY-----YFDNSFSKTTCGGGINLVTAWIQNGER-------MDICSVDGSCQIYLVE 150 (799)
T ss_pred eeccccccCCcccceEEecCcceee-----eccCCccccCCCCcccccccccccCCC-------cccchhhcccchhhhh
Confidence 3445556689999999999888888 665444 6788999987655543322 1233333336789999
Q ss_pred cCCHHHHHHHHHHHHHhH
Q psy407 87 ADTRESMIQWMNALSLAS 104 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~ 104 (160)
+-++.+.+.|+.+++.+.
T Consensus 151 ~~~~~~~~~~~~~~~l~~ 168 (799)
T KOG1737|consen 151 LSKKLQRQGWLHALELAP 168 (799)
T ss_pred hhHHHhhcchhhhhhhcc
Confidence 999999999999999984
No 81
>KOG1451|consensus
Probab=96.39 E-value=0.0081 Score=54.65 Aligned_cols=95 Identities=14% Similarity=0.179 Sum_probs=62.7
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCC--eEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC-ce
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATH--VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-MR 81 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~--~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-~r 81 (160)
|.|.+-++..-.+.|.|.|||.... .+..-|- --|......+..++.|..|.=...+ .+.++|||.|...+ .-
T Consensus 269 GYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~-~qk~g~k~g~~~~~~lKsC~RRktd---SIdKRFCFDve~~erpg 344 (812)
T KOG1451|consen 269 GYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPA-NQKTGTKMGQTATFKLKSCSRRKTD---SIDKRFCFDVEVEERPG 344 (812)
T ss_pred eeeeehhhhhccchhhhheeEeecccceEEEeec-ccCCCCcCCCcceEEehhhccCccc---ccccceeeeeeecccCC
Confidence 4455555555566899999999853 2222000 0111112335556788888754443 35789999998642 34
Q ss_pred EEEEEcCCHHHHHHHHHHHHHh
Q psy407 82 TYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+..++|-+|+++..||.|+.-+
T Consensus 345 viTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 345 VITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred eeehHhhhhhHHHHHHHHhcCC
Confidence 7899999999999999999876
No 82
>KOG4424|consensus
Probab=95.60 E-value=0.036 Score=50.24 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=61.0
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc-----cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE-----EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~-----e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
|-+..+.-+ ...-..||++|-...|.| -+... .-+....+.+.++.|..... ....+.|.+..+
T Consensus 276 G~l~Kis~k--~~~~qeRylfLFNd~~ly-----c~~r~~~~~~k~~~r~~~s~~~~~v~~~~~---~~~~~tF~~~G~- 344 (623)
T KOG4424|consen 276 GQLQKISAK--NGTTQERYLFLFNDILLY-----CKPRKRLPGSKYEVRARCSISHMQVQEDDN---EELPHTFILTGK- 344 (623)
T ss_pred cceeeeecc--CCCcceeEEEEehhHHHh-----hhhhhhcccceeccceeeccCcchhccccc---ccCCceEEEecc-
Confidence 455566555 346789998888765554 22211 02233445555655443322 256889999754
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.|...|.|-|+++..+||++|+.|+-.
T Consensus 345 ~r~vel~a~t~~ek~eWv~~I~~~Id~ 371 (623)
T KOG4424|consen 345 KRGVELQARTEQEKKEWVQAIQDAIDK 371 (623)
T ss_pred cceEEeecCchhhHHHHHHHHHHHHHH
Confidence 589999999999999999999998754
No 83
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.50 E-value=0.32 Score=36.35 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=51.4
Q ss_pred eEEEEEEeCCeEEEcccCCCCCCc---------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeC-CceEEEEEcCC
Q psy407 20 HNVYLLLATHVMVFSPEISGLGFE---------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA-NMRTYYFAADT 89 (160)
Q Consensus 20 kkRWFVL~~~~L~y~~~~yYk~~~---------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~-~~r~~~l~Aes 89 (160)
+.|.+-|-+..+.+ -|-.. .-..+..|.|....++.-...| ...|.|.+. ....|.|.|.|
T Consensus 30 ~eRhVFLFE~~viF-----~K~~~~~~~~~~~p~Y~yK~~ikls~lglte~v~gd----~~kFeiw~~~~~~~yilqA~t 100 (133)
T cd01227 30 MQRHIFLHEKAVLF-----CKKREENGEGEKAPSYSFKQSLKMTAVGITENVKGD----TKKFEIWYNAREEVYILQAPT 100 (133)
T ss_pred ceeEEEEecceEEE-----EEEeccCCCCCcceeEEEeeeEEeecccccccCCCC----ccEEEEEeCCCCcEEEEEcCC
Confidence 46777777766665 22211 1234567777776665532222 235666542 24689999999
Q ss_pred HHHHHHHHHHHHHhHhhc
Q psy407 90 RESMIQWMNALSLASILQ 107 (160)
Q Consensus 90 e~e~~~Wi~aL~~a~~~~ 107 (160)
.+..+.||..|+.....|
T Consensus 101 ~e~K~~Wv~~I~~iL~~Q 118 (133)
T cd01227 101 PEIKAAWVNEIRKVLTSQ 118 (133)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999977655
No 84
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.46 E-value=0.15 Score=36.47 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=48.2
Q ss_pred CCc-eEEEEEEe--CCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCC-CC-------c---cCceeeEEEeeCC--
Q psy407 17 TLC-HNVYLLLA--THVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSS-DD-------K---VFRKFSFKAEHAN-- 79 (160)
Q Consensus 17 k~W-kkRWFVL~--~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~-~~-------~---~~~~~~F~i~~~~-- 79 (160)
+.+ ++|.|.|+ +..|++ ++... ...+.|.|.... |..... .+ . .....+|.|....
T Consensus 18 ~~~~~~~~f~ld~~~~~l~W------~~~~~-~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~ 90 (115)
T cd01248 18 TSRERRRLFRLDEKGFFLYW------KDEGK-KEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDL 90 (115)
T ss_pred CCceeeEEEEEcCCCcEEEE------eCCCC-ccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCC
Confidence 344 45668886 446665 33221 155677776632 222111 00 0 1223588887653
Q ss_pred -ceEEEEEcCCHHHHHHHHHHHHH
Q psy407 80 -MRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 80 -~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
.++..|.|+|.++.+.|+..|+.
T Consensus 91 ~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 91 NLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred CeeEEEEEECCHHHHHHHHHHHhh
Confidence 47899999999999999999874
No 85
>KOG3549|consensus
Probab=95.35 E-value=0.021 Score=49.18 Aligned_cols=88 Identities=17% Similarity=0.187 Sum_probs=60.3
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEE-----EecCCCC-ccCceeeEEEeeCCceEEEEE
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKI-----SPCSSDD-KVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V-----~~~~~~~-~~~~~~~F~i~~~~~r~~~l~ 86 (160)
+-..+.++.||..|++.++|. |..+--.....+-.+.-+.| .++.+.| .-.|++||.|...+....||+
T Consensus 294 ~~s~q~y~P~FLaLkG~~~y~-----F~tPPv~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~qs~~ge~~yfs 368 (505)
T KOG3549|consen 294 NISWQSYKPRFLALKGTEVYL-----FETPPVNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQSSGGEPRYFS 368 (505)
T ss_pred cccccccCceeEEecCcEEEE-----EcCCCcchhhhhhhhhhHHHHHHHHHHhccccccccccceEEEEcCCCCceEEE
Confidence 345667999999999999998 77654322211111111111 1111111 126899999998878889999
Q ss_pred cCCHHHHHHHHHHHHHhHh
Q psy407 87 ADTRESMIQWMNALSLASI 105 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~ 105 (160)
.|.+.|+.+|=++.+.|.-
T Consensus 369 VEl~seLa~wE~sfq~Atf 387 (505)
T KOG3549|consen 369 VELRSELARWENSFQAATF 387 (505)
T ss_pred EehhhHHHHHHHHHhhHHh
Confidence 9999999999999999874
No 86
>PF15408 PH_7: Pleckstrin homology domain
Probab=95.16 E-value=0.0084 Score=41.79 Aligned_cols=79 Identities=14% Similarity=0.165 Sum_probs=53.5
Q ss_pred ceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEe--cCCCCc-cC---ceeeEEEeeCCceEEEEEcCCHHH
Q psy407 19 CHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISP--CSSDDK-VF---RKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 19 WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~--~~~~~~-~~---~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
-+|||.||++..+.+ |.++. ..-+.++.|+...+.. ++-... .+ .-|.|-...++.+..-+-|++.+-
T Consensus 12 i~rRF~~L~~K~~~~-----~~~KG-G~~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~ 85 (104)
T PF15408_consen 12 IQRRFVMLRSKQFNM-----YEDKG-GQYLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKV 85 (104)
T ss_pred HHHHHHhhhhceeEE-----ecccC-CceeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHH
Confidence 478999999999998 76543 4455666665533322 111000 01 235677777777888899999999
Q ss_pred HHHHHHHHHHh
Q psy407 93 MIQWMNALSLA 103 (160)
Q Consensus 93 ~~~Wi~aL~~a 103 (160)
|+.||.++..-
T Consensus 86 ~~~Wi~~mN~~ 96 (104)
T PF15408_consen 86 CQSWIQVMNSP 96 (104)
T ss_pred HHHHHHHhcCh
Confidence 99999999763
No 87
>KOG2996|consensus
Probab=95.13 E-value=0.035 Score=50.64 Aligned_cols=117 Identities=20% Similarity=0.222 Sum_probs=77.8
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCcc-CccceEEEcCCeEEEecCCCCcc--C-----ceeeEEEeeC-CceEEEEEcC
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFEE-EKLLGSILLPSYKISPCSSDDKV--F-----RKFSFKAEHA-NMRTYYFAAD 88 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~e-~~~~g~I~L~~~~V~~~~~~~~~--~-----~~~~F~i~~~-~~r~~~l~Ae 88 (160)
.=+.||..|-+..+.. -|-..+ .+....|.|..+.+...+..+.- + ..|.|-|++. +..-|-|-+.
T Consensus 421 tkqdRyiFLfDkvviV-----CKrkG~sy~lke~i~l~~y~m~d~~~~~kd~kk~~~~~ws~~f~lI~tqg~ngl~fy~K 495 (865)
T KOG2996|consen 421 TKQDRYIFLFDKVVIV-----CKRKGDSYELKEIIYLNAYKMSDDPIDDKDNKKVSTITWSYGFYLIHTQGRNGLEFYCK 495 (865)
T ss_pred CccceEEeEecceEEE-----eeccCcchhHHHHHHHHhhccccCCCCchhhhhccceeeeeeEEEEEEcCCcceEEEEe
Confidence 3467887777765555 443332 45666788888888775443221 2 5688888764 4557888899
Q ss_pred CHHHHHHHHHHHHHhHhhccCCCcccccccccCCCCCCCCCcCCCCCCCCCCCCccccccCc
Q psy407 89 TRESMIQWMNALSLASILQNSSTGWEDRRLNNEDNDSGFHGTYGRSSNRAKPNNAEQQYLGG 150 (160)
Q Consensus 89 se~e~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~ 150 (160)
|++-...||.++..|...-.+ |-.+...|..+--....+.-|.+|+-.|-|
T Consensus 496 te~~kkkWmeqfema~SNi~P-----------dya~an~H~fqmhtF~~~tsCkvC~mllrG 546 (865)
T KOG2996|consen 496 TEDLKKKWMEQFEMAKSNISP-----------DYARANNHDFQMHTFKNTTSCKVCQMLLRG 546 (865)
T ss_pred cHHHHHHHHHHHHHHHhcCCc-----------ccccccCcceEEEeccCCcchHHHHHHhhh
Confidence 999999999999998632222 112233444444455888899999998877
No 88
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=94.49 E-value=0.37 Score=36.60 Aligned_cols=90 Identities=13% Similarity=0.156 Sum_probs=63.0
Q ss_pred EecCCCCCCceE----EEEEEeCCeEEEcccCCCCCCcc--Cc-----------------cceEEEcCCeEEEecCCCCc
Q psy407 10 LNDNMASTLCHN----VYLLLATHVMVFSPEISGLGFEE--EK-----------------LLGSILLPSYKISPCSSDDK 66 (160)
Q Consensus 10 ~~~~~~~k~Wkk----RWFVL~~~~L~y~~~~yYk~~~e--~~-----------------~~g~I~L~~~~V~~~~~~~~ 66 (160)
||-..+.+.||| -=||++.-.... ||+... .+ .+..|++....|...+..+
T Consensus 36 LNp~~slgk~kKe~e~~~FVFK~AVVlv-----~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad- 109 (160)
T cd01255 36 LNPSDSLGKIKKELELMCFVFKSAVVLV-----YKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAAD- 109 (160)
T ss_pred ecCChhhccccCCceEEEEEecceEEEE-----EcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcC-
Confidence 444445555665 348888887776 765433 12 2336777777777665544
Q ss_pred cCceeeEEEeeC-------CceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 67 VFRKFSFKAEHA-------NMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 67 ~~~~~~F~i~~~-------~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
....+.++|+|. ..++|.|+|.+.+..+..|++|++..+
T Consensus 110 ~e~~~vwEliH~kSe~egRpE~vfqLCcS~~E~k~~flK~Irsilr 155 (160)
T cd01255 110 MESNFLWELIHLKSELEGRPEKVFVLCCSTAESRNAFLKTIRSILR 155 (160)
T ss_pred cccceEEEEEeecccccCCCcceEEEecCCHHHHHHHHHHHHHHHH
Confidence 367889999874 257999999999999999999998654
No 89
>PF15411 PH_10: Pleckstrin homology domain
Probab=94.11 E-value=0.73 Score=33.55 Aligned_cols=75 Identities=16% Similarity=0.272 Sum_probs=50.2
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCcc-------------------CccceEEEcCCeE-EEecCCCCccCceeeEEEe
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEE-------------------EKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAE 76 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e-------------------~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~ 76 (160)
..|+.+.+-|-+..|.+ .|.... -.++|.|.+...+ |...+. ...|...|.
T Consensus 19 ~~erE~~vYLFe~illc-----~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~----~g~~~L~i~ 89 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLC-----CKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSK----PGSYSLQIS 89 (116)
T ss_pred CcceeeeeeeeeeeEEE-----EecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCC----CCceEEEEE
Confidence 56999999998887777 443221 1245777776422 222221 235667776
Q ss_pred e---CCceEEEEEcCCHHHHHHHHHHH
Q psy407 77 H---ANMRTYYFAADTRESMIQWMNAL 100 (160)
Q Consensus 77 ~---~~~r~~~l~Aese~e~~~Wi~aL 100 (160)
- ++.-.|.|...|+++|..|-++|
T Consensus 90 w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 90 WKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 4 35678999999999999998875
No 90
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=93.95 E-value=0.11 Score=38.68 Aligned_cols=36 Identities=14% Similarity=0.335 Sum_probs=26.9
Q ss_pred CceeeEEEeeCCc--eEEEEEcCCHHHHHHHHHHHHHh
Q psy407 68 FRKFSFKAEHANM--RTYYFAADTRESMIQWMNALSLA 103 (160)
Q Consensus 68 ~~~~~F~i~~~~~--r~~~l~Aese~e~~~Wi~aL~~a 103 (160)
+..|.|+|.+-+. .+|.|.|+|+.++++|+++|..+
T Consensus 97 ~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 97 KSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp SSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred CCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 5678888877543 35799999999999999999875
No 91
>KOG0705|consensus
Probab=93.44 E-value=0.057 Score=49.22 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=30.7
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 71 FSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 71 ~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
++|.|...-..+++|.|.+.+|+..||.||..-+.
T Consensus 446 e~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIl 480 (749)
T KOG0705|consen 446 ECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQIL 480 (749)
T ss_pred ceEEEeccccchhhhhhcchhhHHHHHHHHHHHHH
Confidence 59999876667999999999999999999987553
No 92
>KOG1264|consensus
Probab=92.82 E-value=0.2 Score=47.51 Aligned_cols=59 Identities=20% Similarity=0.361 Sum_probs=44.8
Q ss_pred cceEEEcCCeEEEecCCCCccCceeeEEEeeC--CceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 47 LLGSILLPSYKISPCSSDDKVFRKFSFKAEHA--NMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 47 ~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~--~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+|..++.-|.|...+.+. .++.|+|.|... +...|.|+|++.++..+|+++|+.++..
T Consensus 852 ~rgi~d~~~~nvv~~~q~~-n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~ 912 (1267)
T KOG1264|consen 852 CRGILDLNTYNVVKAPQGK-NQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWK 912 (1267)
T ss_pred hhccccccccceeeccccc-CCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHH
Confidence 4456677777776655432 367899998742 4567999999999999999999998743
No 93
>PF15404 PH_4: Pleckstrin homology domain
Probab=92.45 E-value=0.71 Score=36.38 Aligned_cols=22 Identities=23% Similarity=0.454 Sum_probs=20.3
Q ss_pred eEEEEEcCCHHHHHHHHHHHHH
Q psy407 81 RTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
+.++|.|-|.+|+..||-+|..
T Consensus 162 ks~VF~ARSRqERD~WV~~I~~ 183 (185)
T PF15404_consen 162 KSMVFMARSRQERDLWVLAINT 183 (185)
T ss_pred cEEEEEeccHHHHHHHHHHHHh
Confidence 6789999999999999999975
No 94
>KOG0517|consensus
Probab=91.74 E-value=0.0033 Score=62.92 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=65.4
Q ss_pred EecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCc------cceEE--EcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 10 LNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEK------LLGSI--LLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 10 ~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~------~~g~I--~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
++.+...+.|..-|+|+..+.|.+ |+|..... ..|.- .|..+.|....+ -.++++.|++..+...
T Consensus 2314 ~e~k~~nRsw~~vy~~i~e~el~f-----ykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~d--y~kkk~v~~l~~~~ga 2386 (2473)
T KOG0517|consen 2314 LEIKASNRSWDNVYCRIREKELGF-----YKDAKKDLASVELLVRGEPPLELDMAAIEVASD--YHKKKHVFLLQLPPGA 2386 (2473)
T ss_pred hhhhhhcccHHHHHHHHHhccchh-----hcccCcccccchhhccCCcchhcchhHHHHHHH--HHHHhHhhhhcCCchH
Confidence 455778889999999999999998 88865421 12222 223333433222 2378899999988888
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.|.|.|.++++|..|+.++..+.
T Consensus 2387 e~llq~k~ee~m~sWL~~~a~~~ 2409 (2473)
T KOG0517|consen 2387 EHLLQAKDEEEMESWLRALAVKR 2409 (2473)
T ss_pred HHHHhhccHHHHHHHHHHHHHHH
Confidence 99999999999999999988875
No 95
>KOG4407|consensus
Probab=91.29 E-value=0.017 Score=56.59 Aligned_cols=82 Identities=18% Similarity=0.142 Sum_probs=64.3
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCccC--------------ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEEE--------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~--------------~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
.+.|++-|.+|.++.|+. |++..+. ..--.+.|.+|.+.+.-.+ .+++.+|++.+.+..
T Consensus 946 Lr~wk~~y~~l~ghsl~L-----~ss~re~~~~~aas~as~~~st~tts~c~nscltdI~yse--tkrn~vfRLTt~d~c 1018 (1973)
T KOG4407|consen 946 LREWKLSYTGLHGHSLVL-----NSSAREHNSQSAASLASSSCSTATTSECLNSCLTDIQYSE--TKRNQVFRLTTNDLC 1018 (1973)
T ss_pred hhhhhhHHHHhcccccee-----cccccccCcchhhhhcccccccccCccccccchhhhhhhh--hhhhhHHHhHHHHHH
Confidence 456999999999999998 8887762 1223567778877664332 378889999887767
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.+.|.||+.++|..|+......+
T Consensus 1019 e~lfqaeDrddmlgG~~ttq~St 1041 (1973)
T KOG4407|consen 1019 EGLFQAEDRDDMLGGLSTTQSST 1041 (1973)
T ss_pred hHhhccCccccccchhhhhhhcc
Confidence 89999999999999999886544
No 96
>KOG3551|consensus
Probab=91.04 E-value=0.36 Score=42.30 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=65.0
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc-----CccceEEEcCCeEEEecCCCC---ccCceeeEE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE-----EKLLGSILLPSYKISPCSSDD---KVFRKFSFK 74 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-----~~~~g~I~L~~~~V~~~~~~~---~~~~~~~F~ 74 (160)
|+|.|.-=-..+|.+.|+.-+.+|.+..|.+ |.+--. .+|..+-+|-...+....+.. ..+-..+|.
T Consensus 294 HiGWLaeq~~~~G~~~w~P~l~~lTekelli-----Yes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa 368 (506)
T KOG3551|consen 294 HIGWLAEQVSGGGISQWKPKLMALTEKELLI-----YESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFA 368 (506)
T ss_pred hhhhHHhhccCCChhhhhhheeeechhhhhh-----hhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEE
Confidence 5565554445566778999999999987777 665322 457777777554443332211 012234777
Q ss_pred EeeC---CceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 75 AEHA---NMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 75 i~~~---~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+.+. +-.+++|++||..|+..|...|-+.+
T Consensus 369 ~RtGTrqGV~thlfrvEThrdLa~WtRslVqGc 401 (506)
T KOG3551|consen 369 TRTGTRQGVETHLFRVETHRELAAWTRSLVQGC 401 (506)
T ss_pred EecccccceEEEEEEeccHHHHHHHHHHHHHHH
Confidence 7653 34799999999999999999887644
No 97
>KOG4236|consensus
Probab=90.06 E-value=0.38 Score=44.16 Aligned_cols=84 Identities=15% Similarity=0.195 Sum_probs=63.0
Q ss_pred ceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCe-EEEecCCC---CccCceeeEEEeeCCceEEEEEcCC-----
Q psy407 19 CHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSY-KISPCSSD---DKVFRKFSFKAEHANMRTYYFAADT----- 89 (160)
Q Consensus 19 WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~-~V~~~~~~---~~~~~~~~F~i~~~~~r~~~l~Aes----- 89 (160)
-||.|..|+..|+.. |.++...+-...|+|... .|+..... -....+|+|+|.+.. +.||.-|+
T Consensus 429 RkrHYWrldsk~itl-----fqn~s~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~T~~--~vyfVge~p~~~~ 501 (888)
T KOG4236|consen 429 RKRHYWRLDSKCITL-----FQNESTNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIRTAT--TVYFVGENPSSTP 501 (888)
T ss_pred hhhhhheeccceeEe-----eecCCCceeEEeecHHHhheeeccCCcccCCCCCCCceEEEEeee--EEEEecCCCCCCc
Confidence 366677888899999 999988888899999874 45444311 112468999999754 67888888
Q ss_pred -------HHHHHHHHHHHHHhHhhccC
Q psy407 90 -------RESMIQWMNALSLASILQNS 109 (160)
Q Consensus 90 -------e~e~~~Wi~aL~~a~~~~~~ 109 (160)
.+-.+-|-.||++|.+.-.+
T Consensus 502 ~~~~g~g~d~a~~w~~ai~~alMpV~p 528 (888)
T KOG4236|consen 502 GGESGVGLDAAQGWETAIQQALMPVTP 528 (888)
T ss_pred cccccccchhhccCchhhhhccccccc
Confidence 56689999999999865443
No 98
>KOG0248|consensus
Probab=89.90 E-value=0.26 Score=45.88 Aligned_cols=80 Identities=8% Similarity=-0.147 Sum_probs=58.1
Q ss_pred CCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC-eEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 14 MASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
.-+|.|++|||++.++.+.| |+++-+ .+.+.|.+.+ |.+.--... ...++.|.- .++++-+|...-
T Consensus 270 ~v~k~gqi~~y~~~~~~~~~-----p~s~~d-~~s~~~~~~~~~s~~fqli~--~t~~~~~~~-----~s~~lt~dw~~i 336 (936)
T KOG0248|consen 270 VVFKNGQISFYRKHNNRDEE-----PASKID-IRSVTKLEQQGAAYAFQLIT--STDKMNFMT-----ESERTTHDWVTI 336 (936)
T ss_pred eeeccceEEEEEcCCCcccc-----ccCccc-ccccceeeccchhHHhhhhh--hceeEEEec-----cChhhhhhhHHH
Confidence 34688999999999999998 998874 5778887755 665432221 133443422 368999999999
Q ss_pred HHHHHHHHHHhHhh
Q psy407 93 MIQWMNALSLASIL 106 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~ 106 (160)
+++||+++...-..
T Consensus 337 L~~~iKv~~~~~~a 350 (936)
T KOG0248|consen 337 LSAAIKATTLREMA 350 (936)
T ss_pred HHHHHHHHhccchh
Confidence 99999999876543
No 99
>KOG3523|consensus
Probab=89.30 E-value=0.64 Score=42.72 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=46.1
Q ss_pred ceEEEEEEeCCeEEEcccCCCCCCccC-------ccceEEEcCCeEEEe-cCCC--CccCceeeEEEee----C-CceEE
Q psy407 19 CHNVYLLLATHVMVFSPEISGLGFEEE-------KLLGSILLPSYKISP-CSSD--DKVFRKFSFKAEH----A-NMRTY 83 (160)
Q Consensus 19 WkkRWFVL~~~~L~y~~~~yYk~~~e~-------~~~g~I~L~~~~V~~-~~~~--~~~~~~~~F~i~~----~-~~r~~ 83 (160)
-|.-|+-|-..+|.. -|...+. .+.+.|.+..|.-.. .+.. ....+++.|.+.- . ....|
T Consensus 499 ~~~vylfLFnD~Lli-----tk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~ 573 (695)
T KOG3523|consen 499 SKTVYLFLFNDLLLI-----TKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTEL 573 (695)
T ss_pred cceeeeeeecceeeE-----eeecCCCceEEeeccchhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceee
Confidence 445666666666665 4443332 344455544443101 0000 0123567888752 1 23589
Q ss_pred EEEcCCHHHHHHHHHHHHH
Q psy407 84 YFAADTRESMIQWMNALSL 102 (160)
Q Consensus 84 ~l~Aese~e~~~Wi~aL~~ 102 (160)
.|+|+|+.||++||.||.-
T Consensus 574 lL~a~s~Sd~~RWi~Al~p 592 (695)
T KOG3523|consen 574 LLSAESQSDRQRWISALRP 592 (695)
T ss_pred eecCCchHHHHHHHHhcCC
Confidence 9999999999999999984
No 100
>KOG4047|consensus
Probab=87.57 E-value=0.41 Score=42.29 Aligned_cols=99 Identities=15% Similarity=0.037 Sum_probs=60.0
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEc--ccCCC-CCCcc-----CccceEEEcCCeE-EEecCCCCccCceeeEEE
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFS--PEISG-LGFEE-----EKLLGSILLPSYK-ISPCSSDDKVFRKFSFKA 75 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~--~~~yY-k~~~e-----~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i 75 (160)
|++-.-..+-+.|.|.++|.+|..+.+.-- =+.++ +..+. .-..-.|.|.+|. |+...-+......+.|..
T Consensus 12 g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~i~~~f~ 91 (429)
T KOG4047|consen 12 GVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPGITAFFC 91 (429)
T ss_pred CccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCCceEEEe
Confidence 333344456677899999999986532210 00002 22222 1123577888864 555543333356677666
Q ss_pred eeCCceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 76 EHANMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 76 ~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.... . +|-|+++-+...||++|..-+..
T Consensus 92 ~~a~-e--~~~~~q~l~~~~w~~~i~~~~~~ 119 (429)
T KOG4047|consen 92 DRAE-E--LFNMLQDLMQANWINAIEEPAIP 119 (429)
T ss_pred cchH-H--HHHHHHHHHhhhhhhhhhhcccc
Confidence 5433 2 88899999999999999987765
No 101
>KOG1170|consensus
Probab=85.96 E-value=0.031 Score=52.58 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=53.4
Q ss_pred CCceEEEEEEeCCe-EEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 17 TLCHNVYLLLATHV-MVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 17 k~WkkRWFVL~~~~-L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
..|++|++.+++.. ++| -+.... -..-.+.|....|... .+.+.++.|.|+++. ++..++|++..+|..
T Consensus 16 Ea~k~r~~~~k~~~~~~v-----akTa~g-~~~~~~d~t~a~~~eS---s~~n~~~sf~vi~~~-rk~r~~adn~ke~e~ 85 (1099)
T KOG1170|consen 16 EAWKQSILRAKDRMPEKV-----AKTASG-PLFALLDLTSAHVAES---STNNPRPSFCVITPV-RKHRLCADNRKEMEK 85 (1099)
T ss_pred HHHHHHHHHHHHHHHHHH-----HhccCC-ccHHHHhccccccccc---ccCCCCCCeeEeccc-HHhhhhccchhHHHH
Confidence 36999999999876 444 333222 2222334444443322 234667789998764 789999999999999
Q ss_pred HHHHHHHhHh
Q psy407 96 WMNALSLASI 105 (160)
Q Consensus 96 Wi~aL~~a~~ 105 (160)
||+++++-.-
T Consensus 86 wi~~~kt~q~ 95 (1099)
T KOG1170|consen 86 WINQSKTPQH 95 (1099)
T ss_pred hhccccchhh
Confidence 9999998643
No 102
>KOG3531|consensus
Probab=81.64 E-value=2.1 Score=40.84 Aligned_cols=76 Identities=14% Similarity=0.185 Sum_probs=53.9
Q ss_pred eEEEEEEe-CCeEEEcccCCCCCCc---cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 20 HNVYLLLA-THVMVFSPEISGLGFE---EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 20 kkRWFVL~-~~~L~y~~~~yYk~~~---e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
++|=|.|- +-.||- -|+.. .-...|.|+|. .+++.++.+ ..-+|+|.|.. ..+..|.+|.+..++..
T Consensus 765 qqrmfFLfsdillyt-----sk~~~~~~~fri~g~lP~~-l~~en~en~--~s~p~~~ti~~-~qk~i~vsast~~~sk~ 835 (1036)
T KOG3531|consen 765 QQRMFFLFSDILLYT-----SKGPDVQKCFRINGDLPLT-LTMENSENE--WSVPHCFTISG-AQKQIYVSASTRRESKK 835 (1036)
T ss_pred hhhhhhhhhhhheec-----cCCCChhheeEeccCCceE-eeeeccccc--ccCCceEEEec-cceEEEEeccchhhhhh
Confidence 45544454 444443 34422 24577889988 666666443 56789999975 46899999999999999
Q ss_pred HHHHHHHhH
Q psy407 96 WMNALSLAS 104 (160)
Q Consensus 96 Wi~aL~~a~ 104 (160)
|+..++.|.
T Consensus 836 ~~~~r~~~i 844 (1036)
T KOG3531|consen 836 WEFDRRKAI 844 (1036)
T ss_pred hhhccchhh
Confidence 999888876
No 103
>KOG1738|consensus
Probab=77.77 E-value=0.079 Score=48.49 Aligned_cols=96 Identities=16% Similarity=0.102 Sum_probs=69.5
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 96 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~W 96 (160)
..|+++|.++.+...+- |......++.+.+.+....+...... ....-++.-++....|++.|++-.++.-|
T Consensus 83 ~l~~~~~~~~~~~~~~~-----y~~~~s~K~~n~vl~~v~~l~~aak~---l~~wldR~pf~~~~df~~~~nnV~el~~e 154 (638)
T KOG1738|consen 83 NLAKKLWTSLKNLQEYA-----YSNQESEKADNFVLLAVVELIRAAKA---LLFWLDRTPFPQIKDFSFACNNVQELNLE 154 (638)
T ss_pred HHHHHHHHHhccccccc-----cccchhhcCccccchhhhhhhHHHHH---HHHHhhhCCccccchHHHHHHHHHHHHHH
Confidence 35999999999988777 99888889999998877554332211 22334555555667899999999999999
Q ss_pred HHHHHHhHhhccCCCccccccccc
Q psy407 97 MNALSLASILQNSSTGWEDRRLNN 120 (160)
Q Consensus 97 i~aL~~a~~~~~~~~~~~~~~~~~ 120 (160)
++.+-.+...+...++....+..+
T Consensus 155 L~~~v~~d~~a~e~t~~~~~~~s~ 178 (638)
T KOG1738|consen 155 LNTLVHADIHALETTGDVLCYSES 178 (638)
T ss_pred HHHHHHhhhhhhccCCceeEeehh
Confidence 999999877766544544343333
No 104
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=76.38 E-value=8.2 Score=27.96 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=30.4
Q ss_pred ceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 69 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 69 ~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..+.|-|.+. ...+-|.|+|..+.+.|++.|..-.
T Consensus 69 ~~~yfgL~T~-~G~vEfec~~~~~~k~W~~gI~~mL 103 (110)
T PF08458_consen 69 ERRYFGLKTA-QGVVEFECDSQREYKRWVQGIQHML 103 (110)
T ss_pred eEEEEEEEec-CcEEEEEeCChhhHHHHHHHHHHHH
Confidence 5678999886 5789999999999999999998753
No 105
>KOG3551|consensus
Probab=72.49 E-value=5.8 Score=35.01 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=39.9
Q ss_pred cceEEEcCCeEEEe-cCCCCccCceeeEEEeeCC-ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 47 LLGSILLPSYKISP-CSSDDKVFRKFSFKAEHAN-MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 47 ~~g~I~L~~~~V~~-~~~~~~~~~~~~F~i~~~~-~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
-...|+|.=|.|.. ....|+ .+-+|+|.+++ ..+.+|.|.+.++...|.+||..+..
T Consensus 214 d~k~IpLKm~yvaR~~~~~Dp--EnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~ 272 (506)
T KOG3551|consen 214 DRKTIPLKMAYVARNLIDADP--ENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVN 272 (506)
T ss_pred cccccchhhHHHHhhCCCCCc--ccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHh
Confidence 34567877766533 222222 12378998775 45899999999999999999988653
No 106
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=71.17 E-value=1.5 Score=27.44 Aligned_cols=17 Identities=0% Similarity=0.073 Sum_probs=15.7
Q ss_pred CCceEEEEEEeCCeEEE
Q psy407 17 TLCHNVYLLLATHVMVF 33 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y 33 (160)
+.|.|+|+.+.+..|..
T Consensus 28 r~wEKKWVtv~dtslri 44 (52)
T PF04714_consen 28 RKWEKKWVTVGDTSLRI 44 (52)
T ss_pred HHHhhceEEeccceEEE
Confidence 57999999999999998
No 107
>KOG0592|consensus
Probab=70.16 E-value=14 Score=33.90 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=49.7
Q ss_pred ceEEEEEEeCC-eEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHHH
Q psy407 19 CHNVYLLLATH-VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWM 97 (160)
Q Consensus 19 WkkRWFVL~~~-~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi 97 (160)
=+||.|+|..+ .|.| + ++......|.|++..+....+ +....|.|.+|. ++|+|-- =+.....|-
T Consensus 465 ~rkr~lllTn~~rll~-----~-~~~~~~lk~eip~~~~~~~e~------~n~~~~~i~TP~-k~~~l~d-~~~~as~w~ 530 (604)
T KOG0592|consen 465 ARKRMLLLTNGPRLLY-----V-DPQNLVLKGEIPWSPDLRVEL------KNSSTFFIHTPN-KVYYLED-PEQRASVWC 530 (604)
T ss_pred hceeEEEecCCCeEEE-----E-ecccceeccccccCcccceee------ccCcceEEECCc-cceeccC-cccchhHHH
Confidence 35688999854 4444 3 466677899999977432222 223368888875 7888865 556678899
Q ss_pred HHHHHhH
Q psy407 98 NALSLAS 104 (160)
Q Consensus 98 ~aL~~a~ 104 (160)
.+|.+..
T Consensus 531 ~ai~~~~ 537 (604)
T KOG0592|consen 531 KAIETVR 537 (604)
T ss_pred Hhhhhhh
Confidence 9999983
No 108
>KOG3520|consensus
Probab=64.32 E-value=11 Score=37.23 Aligned_cols=58 Identities=16% Similarity=0.163 Sum_probs=40.9
Q ss_pred cceEEEcCCeEEEecCCCCccCceeeEEEeeC--CceEEEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 47 LLGSILLPSYKISPCSSDDKVFRKFSFKAEHA--NMRTYYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 47 ~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~--~~r~~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
...+|.|...-|..+..+ ++-.|-|... +...|-|.|.|..|++-||..|+.++.-..
T Consensus 666 ~spVisL~~livRevAtd----~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~ 725 (1167)
T KOG3520|consen 666 KSPVISLQKLIVREVATD----EKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCP 725 (1167)
T ss_pred CCCceehHHHHHHHHhcc----ccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCC
Confidence 456788877644444442 2224555543 467899999999999999999999986543
No 109
>PF12480 DUF3699: Protein of unknown function (DUF3699) ; InterPro: IPR022168 This domain family is found in eukaryotes, and is approximately 80 amino acids in length.
Probab=56.09 E-value=43 Score=22.49 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=33.3
Q ss_pred ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCC-----HHHHHHHHHHHH
Q psy407 46 KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADT-----RESMIQWMNALS 101 (160)
Q Consensus 46 ~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aes-----e~e~~~Wi~aL~ 101 (160)
+....++|...++...+.+ +....|+.. ..|.||+.-.+ +....+|+..+.
T Consensus 7 eLtr~lplk~v~l~v~~~~---~~~l~lk~~--t~r~~yl~L~~~~~~~~~~F~~w~~lv~ 62 (77)
T PF12480_consen 7 ELTRLLPLKFVKLSVHDLE---KQQLKLKLV--TGRPFYLQLCAPADKPETLFGEWIRLVS 62 (77)
T ss_pred EEeccCCccccEEEEEcCc---ccEEEEEEc--cCCEEEEEEeCcccCcchhHHHHHHHHH
Confidence 3445566666555444332 344455554 46899999555 788999999988
No 110
>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C.
Probab=51.26 E-value=54 Score=22.57 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=29.9
Q ss_pred ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHH
Q psy407 46 KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNA 99 (160)
Q Consensus 46 ~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~a 99 (160)
.....++|.+.+ .+-..-=.-+.-+.+|-..++++|+|.-++.+++++=+++
T Consensus 53 ~~~~~w~~~~I~--~v~~RRyllr~~AlEiF~~dg~s~f~~F~~~~~R~~v~~~ 104 (106)
T PF14844_consen 53 PKSKRWPLSDIK--EVHKRRYLLRDTALEIFFSDGRSYFFNFESKKERDEVYNK 104 (106)
T ss_dssp -TCEEEEGGGEE--EEEEEEETTEEEEEEEEETTS-EEEEE-SSHHHHHHHHCC
T ss_pred CceEEEEHHHhH--HHHHHHhcCcceEEEEEEcCCcEEEEEcCCHHHHHHHHHh
Confidence 344566766633 2210000123347778777889999999999999876544
No 111
>KOG4095|consensus
Probab=51.00 E-value=5.8 Score=30.33 Aligned_cols=18 Identities=0% Similarity=0.049 Sum_probs=16.3
Q ss_pred CCCceEEEEEEeCCeEEE
Q psy407 16 STLCHNVYLLLATHVMVF 33 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y 33 (160)
.+.|-|+|+.+.+..|.+
T Consensus 28 VRrWEKKwVtvgDTslRI 45 (165)
T KOG4095|consen 28 VRRWEKKWVTVGDTSLRI 45 (165)
T ss_pred HHHHhhheEeecccceEE
Confidence 357999999999999999
No 112
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=41.17 E-value=1.7e+02 Score=22.70 Aligned_cols=77 Identities=16% Similarity=0.088 Sum_probs=49.8
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCC-----CCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCC
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGL-----GFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADT 89 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk-----~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aes 89 (160)
...=.+|.++|.+..+|. .. +.........|+|...+ |+..+..| . -|-|..++.--+.|.+..
T Consensus 62 ~~K~~~R~livT~~~iY~-----l~~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~D----~-~~vihv~~~~D~il~~~~ 131 (199)
T PF06017_consen 62 RNKPQPRILIVTDKAIYL-----LDQRKVKDPKKYKLKRRIPLSDITGISVSPLSD----N-FFVIHVPGEGDLILESDF 131 (199)
T ss_pred CCCccceEEEEeCCeEEE-----EEEeecCCceeeEEEeccCcccccEEEEccCCC----C-EEEEEECCCCCEEEEeCc
Confidence 345689999999999998 64 55556678889887754 33332221 1 233332555678999988
Q ss_pred HHHHHHHHHHHHHhHh
Q psy407 90 RESMIQWMNALSLASI 105 (160)
Q Consensus 90 e~e~~~Wi~aL~~a~~ 105 (160)
. .+-+..|..+..
T Consensus 132 k---~Elv~~L~~~~~ 144 (199)
T PF06017_consen 132 K---TELVTILCKAYK 144 (199)
T ss_pred H---HHHHHHHHHHHH
Confidence 7 555666666654
No 113
>KOG3508|consensus
Probab=39.69 E-value=3.2 Score=40.02 Aligned_cols=79 Identities=18% Similarity=0.114 Sum_probs=57.5
Q ss_pred CceEEEEEEe--C--CeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeC---CceEEEEEcCCH
Q psy407 18 LCHNVYLLLA--T--HVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---NMRTYYFAADTR 90 (160)
Q Consensus 18 ~WkkRWFVL~--~--~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~---~~r~~~l~Aese 90 (160)
.|++-+|.|. + -.+.| ++..+..+++|.|+|..+.|..- -.-|.+||+|..+ +--..|++..+.
T Consensus 376 ~~~ki~~sl~~~p~el~~vf-----~s~r~r~~~rgridls~~lv~aS----LFlR~lCpaI~spslF~l~~eYp~~~ts 446 (932)
T KOG3508|consen 376 AWKKIYNSLCVFPSELQLVF-----SSWRKRCKPRGRIDLSDRLVSAS----LFLRFLCPAILSPSLFNLAQEYPSPTTA 446 (932)
T ss_pred HHHHHHHHHhhchHHHHHHH-----HHHHHhhccccchhhhhhhhhHh----hhcccccHHHhhHHHhhhhhhcCCCcch
Confidence 4666666555 2 24444 77777788999999999855432 1256778988754 223489999999
Q ss_pred HHHHHHHHHHHHhHh
Q psy407 91 ESMIQWMNALSLASI 105 (160)
Q Consensus 91 ~e~~~Wi~aL~~a~~ 105 (160)
..+..|++.|+..+.
T Consensus 447 rtLtlIak~lQnlan 461 (932)
T KOG3508|consen 447 RTLTLIAKVLQNLAN 461 (932)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999775
No 114
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=39.13 E-value=1.3e+02 Score=20.69 Aligned_cols=50 Identities=18% Similarity=0.234 Sum_probs=33.4
Q ss_pred EEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 50 SILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 50 ~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+=+|.+.. |+..++. .....|.|... +.|+..|+|.+|....|..|-+..
T Consensus 38 tW~L~eL~~I~~~~~~---~~~~~F~l~~~--k~y~W~a~s~~Ek~~Fi~~L~k~~ 88 (91)
T PF15277_consen 38 TWDLDELKAIDGINPD---KDTPEFDLTFD--KPYYWEASSAKEKNTFIRSLWKLY 88 (91)
T ss_dssp EEEGGG--EEEE-SSS-----TTEEEEESS--SEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEehhhceeeeeecCC---CCCcCEEEEEC--CCcEEEeCCHHHHHHHHHHHHHHh
Confidence 45777754 4444331 22347888763 589999999999999999998764
No 115
>KOG0689|consensus
Probab=37.20 E-value=50 Score=29.60 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=28.0
Q ss_pred eEEEeeCC---ceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 72 SFKAEHAN---MRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 72 ~F~i~~~~---~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.|.|.... ..+|.|+|-+.++...|+.+|.+....|
T Consensus 325 rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~~l~~Q 363 (448)
T KOG0689|consen 325 RFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISSLLWQQ 363 (448)
T ss_pred chhhhhhcccccceeEEeeCCHHHHHHHHHHHHHHHHHH
Confidence 56665432 2379999999999999999998876655
No 116
>KOG4471|consensus
Probab=33.14 E-value=1e+02 Score=28.87 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=31.4
Q ss_pred ceeeEEEeeCCceEEEEEcCCHHHHH-HHHHHHHHhHhh
Q psy407 69 RKFSFKAEHANMRTYYFAADTRESMI-QWMNALSLASIL 106 (160)
Q Consensus 69 ~~~~F~i~~~~~r~~~l~Aese~e~~-~Wi~aL~~a~~~ 106 (160)
..|.+.|...++|..-++-..++... .|+..|..++..
T Consensus 100 ns~~L~i~CKDmr~lR~~fk~~~q~r~~~~e~L~~~~~p 138 (717)
T KOG4471|consen 100 NSFGLEITCKDMRNLRCAFKQEEQCRRDWFERLNRAAFP 138 (717)
T ss_pred cceeEEEEeccccceeeecCcccccHHHHHHHHHHhcCC
Confidence 35667777889999988888888877 999999998754
No 117
>KOG1329|consensus
Probab=32.69 E-value=40 Score=32.63 Aligned_cols=81 Identities=7% Similarity=0.042 Sum_probs=52.6
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 96 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~W 96 (160)
.+|.+||.++++.++.| .++.......-.+.-.+ .+....+....+..|.+... .+.+.+.+.+..+...|
T Consensus 191 ~G~s~~w~~v~~s~~~~-----~~~~~~~~~~~Il~~d~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~r~~ 261 (887)
T KOG1329|consen 191 PGWSKRWGRVKISFLQY-----CSGHRIGGWFPILDNDG---KPHQKGSNESLRLGFTPMEK-DRNLKLGCKSGRSFRGW 261 (887)
T ss_pred ccceeEEEEeccchhhh-----hccccccceeeeeccCC---ccccCCcccceEEeeEeech-hhhhhheeccccccCCc
Confidence 34999999999999987 77633222221222122 22222222234566776654 68999999999999999
Q ss_pred HHHHHHhHhh
Q psy407 97 MNALSLASIL 106 (160)
Q Consensus 97 i~aL~~a~~~ 106 (160)
..++-.+..+
T Consensus 262 ~~~~~~~~~g 271 (887)
T KOG1329|consen 262 PGTIFPQRKG 271 (887)
T ss_pred cceeeehhcc
Confidence 9998887644
No 118
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=28.32 E-value=99 Score=20.87 Aligned_cols=25 Identities=20% Similarity=0.363 Sum_probs=18.5
Q ss_pred eeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 70 KFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 70 ~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
+..+.|.+.+ ++|+|++++.+++.+
T Consensus 70 ~~~i~I~t~~-~~y~isp~~~~~fi~ 94 (100)
T PF10882_consen 70 KNVILIKTKD-KTYVISPEDPEEFIE 94 (100)
T ss_pred CCEEEEEECC-ceEEEcCCCHHHHHH
Confidence 3367777766 899999998877643
No 119
>KOG2677|consensus
Probab=28.15 E-value=46 Score=31.41 Aligned_cols=86 Identities=10% Similarity=0.109 Sum_probs=55.2
Q ss_pred CCCCCceEEEEEEeCC-eEEEcccCCCCCCccCccceEEEcCCe-EEEe--cCCCCccCceeeEEEee------------
Q psy407 14 MASTLCHNVYLLLATH-VMVFSPEISGLGFEEEKLLGSILLPSY-KISP--CSSDDKVFRKFSFKAEH------------ 77 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~-~L~y~~~~yYk~~~e~~~~g~I~L~~~-~V~~--~~~~~~~~~~~~F~i~~------------ 77 (160)
++.+.|+..|+-|.+. .|+. |-++...+|...|.|.-| .+.. +..-|.-+|-+..+|.+
T Consensus 463 MssR~WgPifvkl~~~g~Lql-----YyeqglekPf~E~~L~~~~~lSep~lqnydv~GkIHtvki~~V~YkEK~ky~pk 537 (922)
T KOG2677|consen 463 MSSRHWGPIFVKLTDTGYLQL-----YYEQGLEKPFREFKLEICHELSEPRLQNYDVNGKIHTVKIDRVTYKEKKKYQPK 537 (922)
T ss_pred hhhccccceEEEEcCCceEEE-----eecccccchHHHHhhhhhhccCchhhhccccccceeEEEEEEEEeehhcccCCC
Confidence 4566799999999976 7776 556667778888888664 3433 22112224555555532
Q ss_pred -----CC--ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 78 -----AN--MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 78 -----~~--~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.. ....-|..-|..++...|.+...-.
T Consensus 538 ~~v~H~a~~eq~lKlGstny~dfl~FittVed~L 571 (922)
T KOG2677|consen 538 PAVAHTAEREQVLKLGSTNYDDFLSFITTVEDRL 571 (922)
T ss_pred CccccchhhhhhhhccCCcHHHHHHHHHHHHHHH
Confidence 11 1234466778888889998887643
No 120
>PHA01795 hypothetical protein
Probab=27.67 E-value=60 Score=27.26 Aligned_cols=21 Identities=0% Similarity=0.086 Sum_probs=15.3
Q ss_pred CCCCCCceEEEEEEeCCeEEE
Q psy407 13 NMASTLCHNVYLLLATHVMVF 33 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y 33 (160)
..+.+.||+||=|.....+.|
T Consensus 116 ~~~~~~~~kRykV~~~~~~~~ 136 (280)
T PHA01795 116 GSPHKPWKYRFKVILDDTINY 136 (280)
T ss_pred ccCCccceeEEEEEecCccCH
Confidence 456788999997766655554
No 121
>KOG3037|consensus
Probab=25.56 E-value=4.3e+02 Score=22.76 Aligned_cols=51 Identities=18% Similarity=0.341 Sum_probs=29.2
Q ss_pred eEEEcCC-eEEEecCCCCccCceeeEEEeeCCceEE-EEE---cCCHHHHHHHHHHH
Q psy407 49 GSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTY-YFA---ADTRESMIQWMNAL 100 (160)
Q Consensus 49 g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r~~-~l~---Aese~e~~~Wi~aL 100 (160)
..|...+ |+...++.. +.+|.|+.|......+-| |++ ++.-++.-+=|+-+
T Consensus 63 DlIifPde~eF~kV~qC-~tGRVY~LKFkSs~~r~FFWMQE~~~d~D~e~c~rvNel 118 (330)
T KOG3037|consen 63 DLIVFPDEAEFKKVDQC-KTGRVYVLKFKSSDQRLFFWMQEPSDDNDKELCSRVNEL 118 (330)
T ss_pred ceEEccCceeEEECCCC-CCCcEEEEEecCCCeeEEEEeecCCCCcCHHHHHHHHHH
Confidence 3555544 777777654 348999999887654433 333 44444444444433
No 122
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=24.34 E-value=1.1e+02 Score=22.74 Aligned_cols=24 Identities=21% Similarity=0.144 Sum_probs=21.6
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 81 RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
--|+|.|+|++...+=|.+|.+|-
T Consensus 102 ~CyVFqc~Se~la~eI~lti~QAF 125 (129)
T cd01269 102 ICYVFQCADESLVDEVMLTLKQAF 125 (129)
T ss_pred EEEEEEcCCHHHHHHHHHHHHHHH
Confidence 468999999999999999999874
No 123
>PF08394 Arc_trans_TRASH: Archaeal TRASH domain; InterPro: IPR013603 This region is found in the C terminus of a number of archaeal transcriptional regulators. It is thought to function as a metal-sensing regulatory module [].
Probab=22.07 E-value=98 Score=17.96 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=14.2
Q ss_pred CceeeEEEeeCCceEEEEEcCCH
Q psy407 68 FRKFSFKAEHANMRTYYFAADTR 90 (160)
Q Consensus 68 ~~~~~F~i~~~~~r~~~l~Aese 90 (160)
+.+.++++ +.++|||++++=
T Consensus 10 ~eP~~~k~---~~~~y~fCC~tC 29 (37)
T PF08394_consen 10 GEPIVVKI---GNKVYYFCCPTC 29 (37)
T ss_pred CCEEEEEE---CCeEEEEECHHH
Confidence 45667777 358999998763
No 124
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=21.47 E-value=1.3e+02 Score=24.85 Aligned_cols=29 Identities=24% Similarity=0.204 Sum_probs=24.5
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 81 RTYYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
.+.|++|.+.++..+|+..|+.|...-.+
T Consensus 249 g~~~iaapsREdave~l~iik~a~~~v~~ 277 (290)
T COG4026 249 GTVYIAAPSREDAVEELEIIKEAIEEVIP 277 (290)
T ss_pred eeeeeecCchHHHHHHHHHHHHHHHHhcc
Confidence 35799999999999999999999755433
No 125
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=20.03 E-value=1.6e+02 Score=20.22 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=23.5
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHH
Q psy407 71 FSFKAEHANMRTYYFAADTRESMIQWMNALSL 102 (160)
Q Consensus 71 ~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~ 102 (160)
|.||+..+..|+.-|++.....+.+=+..|.+
T Consensus 1 f~FK~~~~~GrvhRf~~~~s~~~~~L~~~I~~ 32 (86)
T cd06409 1 FAFKFKDPKGRVHRFRLRPSESLEELRTLISQ 32 (86)
T ss_pred CcEEeeCCCCCEEEEEecCCCCHHHHHHHHHH
Confidence 57888888889999998865566555555554
Done!