Query psy407
Match_columns 160
No_of_seqs 172 out of 1081
Neff 6.8
Searched_HMMs 29240
Date Sat Aug 17 00:34:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wi1_A Calcium-dependent activ 99.9 4.8E-26 1.7E-30 167.3 11.5 99 1-106 8-111 (126)
2 2coc_A FYVE, rhogef and PH dom 99.9 3.4E-25 1.2E-29 159.6 11.3 98 3-109 10-110 (112)
3 1v88_A Oxysterol binding prote 99.9 3.2E-24 1.1E-28 158.0 11.6 95 3-108 10-127 (130)
4 1wgq_A FYVE, rhogef and PH dom 99.9 1.6E-23 5.4E-28 147.5 13.6 97 2-107 9-105 (109)
5 2ys3_A UNC-112-related protein 99.9 1.8E-25 6.3E-30 165.8 3.1 104 7-121 15-124 (137)
6 4f7h_A Fermitin family homolog 99.9 3E-24 1E-28 163.4 7.2 106 13-130 60-172 (173)
7 2d9y_A Pleckstrin homology dom 99.9 7.7E-23 2.6E-27 144.8 13.7 101 3-109 13-113 (117)
8 4bbk_A Kindlin-1, fermitin fam 99.9 1.8E-24 6.1E-29 163.2 5.4 109 13-133 39-154 (165)
9 1v5p_A Pleckstrin homology dom 99.9 7.5E-23 2.6E-27 149.8 13.3 98 3-107 17-122 (126)
10 2dkp_A Pleckstrin homology dom 99.9 3.8E-23 1.3E-27 148.7 11.3 100 3-108 23-122 (128)
11 2yry_A Pleckstrin homology dom 99.9 7.2E-23 2.4E-27 146.1 12.4 98 3-106 24-121 (122)
12 3cxb_B Pleckstrin homology dom 99.9 6.8E-23 2.3E-27 146.4 11.8 86 15-107 16-103 (112)
13 1dyn_A Dynamin; signal transdu 99.9 7.3E-23 2.5E-27 149.6 11.7 89 10-104 20-116 (125)
14 2cof_A Protein KIAA1914; PH do 99.9 1.1E-22 3.7E-27 143.2 11.1 91 2-104 9-100 (107)
15 1upq_A PEPP1; PH domain, phosp 99.9 1.9E-22 6.5E-27 144.1 12.3 98 3-106 13-110 (123)
16 1pls_A Pleckstrin homology dom 99.9 5.4E-22 1.8E-26 140.2 14.2 99 3-109 7-105 (113)
17 1v89_A Hypothetical protein KI 99.9 4.2E-22 1.4E-26 140.7 13.1 96 3-105 10-112 (118)
18 1u5d_A SKAP55, SRC kinase-asso 99.9 3.4E-22 1.2E-26 139.0 12.0 98 3-105 5-105 (108)
19 2p0d_A RHO GTPase-activating p 99.9 3.2E-22 1.1E-26 146.3 12.4 97 2-105 13-124 (129)
20 2dhk_A TBC1 domain family memb 99.9 3.2E-22 1.1E-26 143.6 11.8 96 2-107 9-106 (119)
21 1fgy_A GRP1; PH domain, signal 99.9 6.5E-22 2.2E-26 141.6 13.2 95 2-106 6-121 (127)
22 2i5f_A Pleckstrin; PH domain, 99.9 7.6E-22 2.6E-26 138.0 12.5 95 3-104 9-108 (109)
23 1x1f_A Signal-transducing adap 99.9 3.9E-22 1.3E-26 150.2 11.5 99 2-109 19-117 (149)
24 2w2x_D 1-phosphatidylinositol- 99.9 2.2E-22 7.5E-27 146.2 9.6 96 2-105 13-119 (124)
25 2y7b_A Actin-binding protein a 99.9 2.4E-22 8.3E-27 145.7 9.4 98 2-105 6-128 (134)
26 1u5f_A SRC-associated adaptor 99.9 1.2E-21 4E-26 145.2 12.9 99 3-106 19-120 (148)
27 1wg7_A Dedicator of cytokinesi 99.9 6.6E-22 2.3E-26 146.5 9.7 96 2-105 19-124 (150)
28 1x05_A Pleckstrin; PH domain, 99.9 2.7E-21 9.1E-26 139.6 12.3 97 3-106 20-121 (129)
29 2rsg_A Collagen type IV alpha- 99.9 2.1E-21 7.1E-26 133.4 10.7 91 1-104 1-93 (94)
30 4a6h_A Phosphatidylinositol 4, 99.9 3.8E-21 1.3E-25 139.9 12.0 95 3-104 8-117 (120)
31 2d9v_A Pleckstrin homology dom 99.9 2.1E-21 7.2E-26 141.6 10.5 96 3-105 10-114 (130)
32 2d9x_A Oxysterol binding prote 99.9 2.2E-21 7.4E-26 139.1 10.3 94 2-107 9-106 (120)
33 3aj4_A Pleckstrin homology dom 99.9 3.9E-21 1.3E-25 135.5 11.0 96 2-104 6-110 (112)
34 1btn_A Beta-spectrin; signal t 99.9 4.6E-21 1.6E-25 133.4 10.7 83 14-103 18-106 (106)
35 1btk_A Bruton'S tyrosine kinas 99.9 3.6E-21 1.2E-25 147.2 10.9 98 3-106 5-133 (169)
36 1wjm_A Beta-spectrin III; PH d 99.9 6.7E-21 2.3E-25 136.9 11.6 99 2-107 9-119 (123)
37 3rcp_A Pleckstrin homology dom 99.9 5.3E-21 1.8E-25 133.0 10.8 88 5-104 3-92 (103)
38 1eaz_A Tandem PH domain contai 99.8 7.9E-21 2.7E-25 135.8 11.2 99 2-108 15-114 (125)
39 2dn6_A KIAA0640 protein; PH do 99.8 1.4E-20 4.7E-25 132.7 12.3 95 3-107 10-105 (115)
40 1fao_A Dual adaptor of phospho 99.8 1.3E-20 4.4E-25 135.4 12.3 93 3-106 20-113 (126)
41 1x1g_A Pleckstrin 2; PH domain 99.8 3.6E-21 1.2E-25 138.7 9.4 95 3-104 20-123 (129)
42 1v5u_A SBF1, SET binding facto 99.8 1.4E-20 4.8E-25 133.1 11.4 94 3-104 10-110 (117)
43 2cod_A Centaurin-delta 1; ARF 99.8 4.1E-20 1.4E-24 131.0 12.7 92 3-108 10-102 (115)
44 1dro_A Beta-spectrin; cytoskel 99.8 6.8E-21 2.3E-25 137.2 8.0 96 2-104 9-118 (122)
45 3pp2_A RHO GTPase-activating p 99.8 4.1E-20 1.4E-24 134.2 12.2 85 14-104 26-122 (124)
46 1u5e_A SRC-associated adaptor 99.8 2.4E-20 8.2E-25 147.2 11.4 98 3-105 108-208 (211)
47 2lul_A Tyrosine-protein kinase 99.8 1.5E-19 5.2E-24 137.2 15.1 97 5-107 19-123 (164)
48 2j59_M RHO-GTPase activating p 99.8 2.9E-20 9.9E-25 140.3 10.6 96 2-105 4-111 (168)
49 2da0_A 130-kDa phosphatidylino 99.8 1.8E-19 6.2E-24 128.1 13.4 92 2-106 11-102 (114)
50 1unq_A RAC-alpha serine/threon 99.8 7.4E-21 2.5E-25 136.7 6.1 97 3-107 10-112 (125)
51 2dtc_A RAL guanine nucleotide 99.8 1.1E-19 3.8E-24 133.5 12.5 98 2-107 2-114 (126)
52 3a8p_A T-lymphoma invasion and 99.8 5.8E-20 2E-24 149.6 11.9 85 16-107 36-126 (263)
53 2rlo_A Centaurin-gamma 1; spli 99.8 5.6E-20 1.9E-24 133.4 8.5 98 3-105 6-124 (128)
54 2r09_A Cytohesin-3; autoinhibi 99.8 3.6E-19 1.2E-23 149.8 12.4 94 2-105 214-328 (347)
55 3tfm_A Myosin X; split PH doma 99.8 8.7E-19 3E-23 139.4 9.9 93 3-105 60-155 (228)
56 2q13_A DCC-interacting protein 99.8 1.2E-18 4.1E-23 147.6 10.7 95 2-105 279-375 (385)
57 1qqg_A IRS-1, insulin receptor 99.8 1.1E-18 3.8E-23 142.1 9.5 91 3-108 12-115 (264)
58 4h8s_A DCC-interacting protein 99.8 1.7E-18 5.7E-23 147.6 9.6 93 4-105 304-398 (407)
59 3lju_X ARF-GAP with dual PH do 99.8 1E-17 3.5E-22 142.8 13.6 95 3-105 271-372 (386)
60 3tca_A Amyloid beta A4 precurs 99.7 1.1E-18 3.9E-23 141.2 6.8 99 2-107 169-278 (291)
61 2fjl_A 1-phosphatidylinositol- 99.7 4.8E-17 1.6E-21 122.4 12.6 92 6-104 5-147 (150)
62 3lju_X ARF-GAP with dual PH do 99.7 4.1E-17 1.4E-21 139.1 8.2 93 3-104 148-245 (386)
63 3a8n_A TIAM-1, T-lymphoma inva 99.7 5.6E-17 1.9E-21 133.2 8.4 85 15-106 35-125 (279)
64 2rov_A RHO-associated protein 99.7 2.8E-16 9.6E-21 113.6 10.4 95 5-104 5-114 (117)
65 4gmv_A RAS-associated and plec 99.6 8E-15 2.7E-19 120.5 9.4 99 2-107 159-268 (281)
66 3hk0_A Growth factor receptor- 99.6 2.1E-14 7.2E-19 116.6 11.2 97 4-107 135-242 (256)
67 2d9w_A Docking protein 2; PH d 99.5 7.3E-14 2.5E-18 101.9 11.8 98 3-107 14-123 (127)
68 4ejn_A RAC-alpha serine/threon 99.4 6.6E-13 2.3E-17 112.9 7.8 96 4-106 9-109 (446)
69 1w1g_A HPDK1, 3-phosphoinositi 99.3 1.4E-11 4.8E-16 92.6 8.2 76 18-107 65-141 (151)
70 2coa_A Protein kinase C, D2 ty 99.0 5.5E-09 1.9E-13 76.0 10.5 91 11-107 16-121 (125)
71 2d9z_A Protein kinase C, NU ty 98.9 2.3E-08 7.8E-13 73.0 11.3 96 5-108 12-126 (129)
72 1v5m_A SH2 and PH domain-conta 98.8 1.8E-08 6.1E-13 73.9 7.3 86 15-105 38-130 (136)
73 1v61_A RAC/CDC42 guanine nucle 98.8 1.9E-08 6.4E-13 74.0 7.3 84 17-107 42-128 (132)
74 2vrw_B P95VAV, VAV1, proto-onc 98.6 8.5E-07 2.9E-11 74.9 12.7 121 17-153 248-372 (406)
75 3ky9_A Proto-oncogene VAV; cal 98.5 6.5E-07 2.2E-11 79.4 11.9 121 17-153 420-544 (587)
76 3ml4_A Protein DOK-7; tyrosine 98.5 4.4E-07 1.5E-11 71.9 9.4 79 17-103 21-111 (224)
77 1zc3_B Exocyst complex protein 98.5 1.2E-06 4E-11 62.5 10.7 93 5-105 12-107 (113)
78 3qwm_A Iqsec1, IQ motif and SE 98.3 8.5E-06 2.9E-10 60.3 11.6 90 13-105 27-122 (140)
79 3mpx_A FYVE, rhogef and PH dom 98.3 2E-06 6.9E-11 73.0 9.3 90 4-106 247-338 (434)
80 1dbh_A Protein (human SOS 1); 98.3 4.5E-06 1.5E-10 69.1 9.8 81 18-105 258-349 (354)
81 1nty_A Triple functional domai 98.1 2E-05 6.8E-10 64.2 10.6 92 5-105 207-308 (311)
82 2pz1_A RHO guanine nucleotide 98.1 3.2E-05 1.1E-09 66.3 11.9 96 4-106 337-441 (466)
83 1mai_A Phospholipase C delta-1 98.0 3E-05 1E-09 56.1 9.2 81 20-104 29-120 (131)
84 2dfk_A Collybistin II; DH doma 98.0 3E-05 1E-09 65.5 10.5 96 4-106 260-364 (402)
85 3t06_A PDZ-rhogef, RHO guanine 98.0 6.6E-05 2.3E-09 63.3 11.3 84 16-109 307-412 (418)
86 2lg1_A A-kinase anchor protein 98.0 7E-05 2.4E-09 57.5 10.2 81 18-108 85-175 (185)
87 1kz7_A Guanine nucleotide exch 97.9 8.1E-05 2.8E-09 61.8 11.3 81 18-107 236-327 (353)
88 1xcg_A PDZ-rhogef, RHO guanine 97.9 0.0001 3.6E-09 61.0 10.7 80 16-105 265-366 (368)
89 1txd_A RHO guanine nucleotide 97.9 9.5E-05 3.2E-09 61.8 10.4 82 17-107 270-371 (385)
90 2rgn_B RHOA/RAC/CDC42 exchange 97.9 8.3E-05 2.8E-09 61.7 9.8 82 17-107 226-320 (354)
91 3p6a_A RHO guanine nucleotide 97.8 0.00016 5.6E-09 60.0 10.4 80 17-105 272-371 (377)
92 2z0q_A XPLN, RHO guanine nucle 97.7 0.00014 4.9E-09 59.8 9.1 80 20-104 244-345 (346)
93 3odw_A RHO guanine nucleotide 97.7 0.00022 7.4E-09 62.7 10.5 81 17-107 425-526 (536)
94 3tfm_A Myosin X; split PH doma 97.7 6E-05 2E-09 59.2 5.6 45 4-55 24-68 (228)
95 3ksy_A SOS-1, SON of sevenless 97.6 0.00013 4.6E-09 68.8 8.1 79 20-105 457-546 (1049)
96 3jzy_A Intersectin 2; C2 domai 97.6 9E-06 3.1E-10 70.0 0.0 83 17-107 263-364 (510)
97 1foe_A T-lymphoma invasion and 97.5 0.0004 1.4E-08 57.8 9.1 84 18-106 258-367 (377)
98 3zvr_A Dynamin-1; hydrolase, D 97.4 0.0011 3.8E-08 60.9 11.6 90 9-104 547-644 (772)
99 1z87_A Alpha-1-syntrophin; pro 97.0 0.0035 1.2E-07 50.6 8.6 55 48-104 205-261 (263)
100 3v5w_A G-protein coupled recep 96.1 0.034 1.2E-06 50.5 10.2 78 17-105 574-652 (689)
101 2adz_A Alpha-1-syntrophin; pro 95.6 0.053 1.8E-06 41.4 7.8 54 49-104 121-176 (178)
102 1fho_A UNC-89; pleckstrin homo 94.9 0.084 2.9E-06 37.5 6.8 84 17-103 23-110 (119)
103 3qr0_A Phospholipase C-beta (P 87.8 4.1 0.00014 37.6 10.7 90 6-104 27-141 (816)
104 3a98_B Engulfment and cell mot 85.5 4.8 0.00016 30.9 8.5 34 71-104 116-149 (203)
105 2zkm_X 1-phosphatidylinositol- 82.4 5.6 0.00019 36.5 8.8 78 20-105 34-135 (799)
106 3ohm_B 1-phosphatidylinositol- 71.2 15 0.00051 34.2 8.3 90 6-105 26-139 (885)
107 3hie_A Protein PSL1, exocyst c 46.7 88 0.003 23.3 8.1 80 17-108 62-151 (171)
108 3a58_A Exocyst complex compone 40.4 1.5E+02 0.0051 24.2 9.6 81 16-108 131-221 (320)
109 3ulb_A Target of rapamycin com 35.2 1.2E+02 0.004 21.4 10.5 38 69-106 73-115 (121)
110 2rfe_E ERBB receptor feedback 25.6 34 0.0012 19.4 1.6 8 152-159 29-36 (40)
111 2yf0_A Myotubularin-related pr 23.5 3.3E+02 0.011 23.5 8.2 37 69-105 64-100 (512)
No 1
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.93 E-value=4.8e-26 Score=167.28 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=85.3
Q ss_pred CCccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCC----CCccCccceEEEcCCeEEEecCC-CCccCceeeEEE
Q psy407 1 MDHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGL----GFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKA 75 (160)
Q Consensus 1 ~~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk----~~~e~~~~g~I~L~~~~V~~~~~-~~~~~~~~~F~i 75 (160)
|||.|+|.....+ +.|.||||||||++.+||| |+ ++.+.+|.|.|.|.+|+|..+.+ .+..+++|+|+|
T Consensus 8 ~~~~G~L~KqG~~-~~K~WKrRwFVL~~~~LyY-----fk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~ 81 (126)
T 1wi1_A 8 MKHSGYLWAIGKN-VWKRWKKRFFVLVQVSQYT-----FAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNA 81 (126)
T ss_dssp EEEEEEEEEECSS-SCCSCEEEEEEEEEEETTE-----EEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEE
T ss_pred CceeEEEEEeCCC-cccccceEEEEEeCCEEEE-----EEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEE
Confidence 5899999877543 5599999999999999999 99 88899999999999999987633 233478999999
Q ss_pred eeCCceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 76 EHANMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 76 ~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+++ ++|+|+|+|++||.+||.||..|+..
T Consensus 82 v~~~-~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 82 VKEG-DTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp ECSS-CEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ecCC-ceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 9875 57999999999999999999999743
No 2
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.92 E-value=3.4e-25 Score=159.63 Aligned_cols=98 Identities=22% Similarity=0.318 Sum_probs=82.3
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCC---eEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATH---VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~---~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
..|+|... ++ .+.|+||||||+++ +||| |+++++.+|.|.|+|.||+|..+.+.+..+++|+|+|.++
T Consensus 10 ~~G~L~k~-~~--~~~WkkrWfVL~~~~~~~Ly~-----Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~- 80 (112)
T 2coc_A 10 LCGPLRLS-ES--GETWSEVWAAIPMSDPQVLHL-----QGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWA- 80 (112)
T ss_dssp SEEEEEEE-SS--SSCEEEEEEECCTTCTTCEEE-----ECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEET-
T ss_pred EEEEEEec-CC--CCCceEEEEEEECCCccEEEE-----ECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecC-
Confidence 34666663 33 78999999999984 8999 9999999999999999999986544333468999999976
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
.++|+|+|+|+++|++||.+|+.|+.+..+
T Consensus 81 ~~~y~f~A~s~e~~~~Wl~al~~A~~~~~~ 110 (112)
T 2coc_A 81 KQSWYLSASSAELQQQWLETLSTAAHSGPS 110 (112)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHSCCSS
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999866544
No 3
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.91 E-value=3.2e-24 Score=157.97 Aligned_cols=95 Identities=21% Similarity=0.207 Sum_probs=79.4
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc--
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM-- 80 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~-- 80 (160)
..|+|.. ++..+.|+||||||++++|+| |+++++..|+|.|+|.+|+|..... .+++|+|+|.++..
T Consensus 10 k~GwL~K---~g~~k~WkrRWfVLk~~~L~y-----yk~~~~~~p~G~I~L~~~~v~~~~~---~~~~~~F~i~~~~~~~ 78 (130)
T 1v88_A 10 MADWLKI---RGTLKSWTKLWCVLKPGVLLI-----YKTQKNGQWVGTVLLNACEIIERPS---KKDGFCFKLFHPLEQS 78 (130)
T ss_dssp EEEEEEE---CCSSSSCEEEEEEEETTEEEE-----ESCSSSCCCCEEEECSSCEECCCCT---TTSSCEEEEECTTCCC
T ss_pred EEeEEEE---eCCCCCceEEEEEEECCEEEE-----ECCCCCCCceEEEEcCCCEEEECCC---CCCCeEEEEEcCCccc
Confidence 4566654 448899999999999999999 9999999999999999999855433 25679999987643
Q ss_pred ---------------------eEEEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 81 ---------------------RTYYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 81 ---------------------r~~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
++|+|+|+|++|+++||+||+.|+....
T Consensus 79 i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~~ 127 (130)
T 1v88_A 79 IWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSGP 127 (130)
T ss_dssp CSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTTT
T ss_pred cccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcCC
Confidence 3499999999999999999999975443
No 4
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.91 E-value=1.6e-23 Score=147.45 Aligned_cols=97 Identities=16% Similarity=0.245 Sum_probs=83.0
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
++.|+|.. ...+.+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.+....+. .+++++|+|.+++.+
T Consensus 9 ~~~G~L~K--~~~~~~~Wk~RwfvL~~~~L~y-----yk~~~~~~~~~~i~L~~~~~~~~~~~--~~~~~~F~i~~~~~~ 79 (109)
T 1wgq_A 9 TMSGYLYR--SKGSKKPWKHLWFVIKNKVLYT-----YAASEDVAALESQPLLGFTVTLVKDE--NSESKVFQLLHKGMV 79 (109)
T ss_dssp SCEEEEEE--ESSTTSCCEEEEEEEETTEEEE-----ESCTTCSSCSEEEECSSEEEEECCCS--SCSSSEEEEEETTEE
T ss_pred eEEEEEEe--CCCCCCCceeEEEEEeCCEEEE-----ECCCCcCccCceEECCCCEEEECCCC--CCCCcEEEEEeCCCe
Confidence 45677774 3556789999999999999999 99999999999999999998776543 256799999988778
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 82 TYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+|+|+|+|++|+.+||++|+.|+...
T Consensus 80 ~~~~~a~s~~e~~~Wi~al~~a~~~~ 105 (109)
T 1wgq_A 80 FYVFKADDAHSTQRWIDAFQEGTVSG 105 (109)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999997443
No 5
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=1.8e-25 Score=165.78 Aligned_cols=104 Identities=16% Similarity=0.245 Sum_probs=86.3
Q ss_pred EEEEec-CCCCCCceEEEEEEeCCeEEEcccCCCCCCccC--ccceEEEcCCeEEEecCCCCccCceeeEEEeeC---Cc
Q psy407 7 LIILND-NMASTLCHNVYLLLATHVMVFSPEISGLGFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---NM 80 (160)
Q Consensus 7 ~~~~~~-~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~--~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~---~~ 80 (160)
|-+++- +...|.||+|||||+++.|+| ||++++. +|.|.|+|+||+|++.... .+++|+|++..| ++
T Consensus 15 l~~~~pkk~tlK~~KrrWFvlk~~~L~Y-----yK~kee~~~ePig~I~L~gceV~pd~~~--~~~kf~ikl~iPs~~g~ 87 (137)
T 2ys3_A 15 LRIFRPRKLTLKGYRQHWVVFKETTLSY-----YKSQDEAPGDPIQQLNLKGCEVVPDVNV--SGQKFCIKLLVPSPEGM 87 (137)
T ss_dssp CEECCTTSCCSSSSCCCEEEECSSCEEE-----ESSTTTTTSCCSCCBCTTTCEEEECCBG--GGTBEEEEEEEECSSSE
T ss_pred HHhhCccccccccceeEEEEEeCCEEEE-----ECCchhccCCCceEEECCCCEEeccccc--cCCceEEEEEccCCCCc
Confidence 344443 556789999999999999999 9988885 8999999999999886322 367999998765 56
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhHhhccCCCcccccccccC
Q psy407 81 RTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNNE 121 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~ 121 (160)
++|+|.|+|++++++||+||+.|++++.+ ++.++.+|
T Consensus 88 r~y~l~cdsEeqy~~WMaA~rlAskgktm----a~~sy~~e 124 (137)
T 2ys3_A 88 SEIYLRCQDEQQYARWMAGCRLASKGRTM----ADSSYTSE 124 (137)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHTSCCT----TSTHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHhccCcch----hhhhhHHH
Confidence 99999999999999999999999999888 44455555
No 6
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.90 E-value=3e-24 Score=163.41 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=89.5
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEe-cCCCCccCceeeEEEeeC---CceEEEEE
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISP-CSSDDKVFRKFSFKAEHA---NMRTYYFA 86 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~-~~~~~~~~~~~~F~i~~~---~~r~~~l~ 86 (160)
+-..|.||+||||+++..|+| ||++++ ..|.|.|+|+||+|++ ++.. +.+|.|++..| +++.|||+
T Consensus 60 ~~tLKgyKryWFv~kd~~Lsy-----YKskEe~~geP~~~I~LrGCEVtpDVnva---~~Kf~IkL~vP~~~gm~e~~Lr 131 (173)
T 4f7h_A 60 KLTLKGYKQYWCTFKDTSISC-----YKSKEESSGTPAHQMNLRGCEVTPDVNIS---GQKFNIKLLIPVAEGMNEIWLR 131 (173)
T ss_dssp TTBCCCCEEEEEEEETTEEEE-----ESCGGGCSSCCSEEEECTTCEEEEEEETT---TTEEEEEEEEEETTEEEEEEEE
T ss_pred hcccccceeEEEEEeCCEEEE-----EcCHhHhcCCCceEEecCceEEecccccc---ccceeEEEeccCCCCcceeeee
Confidence 566889999999999999999 999998 7899999999999988 4443 67888888665 78999999
Q ss_pred cCCHHHHHHHHHHHHHhHhhccCCCcccccccccC-CCCCCCCCc
Q psy407 87 ADTRESMIQWMNALSLASILQNSSTGWEDRRLNNE-DNDSGFHGT 130 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~~ 130 (160)
|+|++++.+||+||+.|++++++ +|.++.+| +++..+..|
T Consensus 132 cd~E~qya~WMAAcrLAskGktm----Adssy~~Ev~~i~~~L~m 172 (173)
T 4f7h_A 132 CDNEKQYAHWMAACRLASKGKTM----ADSSYNLEVQNILSFLKM 172 (173)
T ss_dssp ESSHHHHHHHHHHHHHHHTTCCT----TSTHHHHHHHHHHHHTSC
T ss_pred cCCHHHHHHHHHHhhhhccCCcc----ccccchHHHHHHHHHHcc
Confidence 99999999999999999999988 66666655 444444444
No 7
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=7.7e-23 Score=144.78 Aligned_cols=101 Identities=29% Similarity=0.516 Sum_probs=85.6
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
+.|+|.... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+...+..+++|+|.|.+++.++
T Consensus 13 ~~G~L~K~~-~~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 86 (117)
T 2d9y_A 13 KAGWLFKQA-SSGVKQWNKRWFVLVDRCLFY-----YKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT 86 (117)
T ss_dssp EEEEEEEEC-TTSSSCEEEEEEEEETTEEEE-----ESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCE
T ss_pred EEEEEEEeC-CCCCCCceEEEEEECCCEEEE-----ECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcE
Confidence 557766543 235789999999999999999 99999999999999999998777554445788999998777799
Q ss_pred EEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 83 YYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
|+|+|+|++|+.+||.+|+.|+..+.+
T Consensus 87 ~~l~a~s~~e~~~Wi~al~~~~~~~~~ 113 (117)
T 2d9y_A 87 YFFSAESPEEQEAWIQAMGEAARVQSG 113 (117)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCTTC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999866554
No 8
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.90 E-value=1.8e-24 Score=163.22 Aligned_cols=109 Identities=20% Similarity=0.273 Sum_probs=91.8
Q ss_pred CCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEe-cCCCCccCceeeEEEeeC---CceEEEEE
Q psy407 13 NMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISP-CSSDDKVFRKFSFKAEHA---NMRTYYFA 86 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~-~~~~~~~~~~~~F~i~~~---~~r~~~l~ 86 (160)
+-..|.||+||||++|..|+| ||++++ ..|.+.|+|+||+|.+ |+.. +.+|.|++..+ ++.++||+
T Consensus 39 rltLKgfKryWfv~kDt~Lsy-----YKSkEe~~geP~~~inLrGCEVtPDVnva---~~Kf~ikL~ip~~~gm~e~~Lr 110 (165)
T 4bbk_A 39 KLMLKACKQYWFVFKDTSIAY-----FKNKELEQGEPIEKLNLRGCEIVPDVNVS---GRKFGIKLLIPVADGMNEVYLR 110 (165)
T ss_dssp -----CCEEEEEEEETTEEEE-----ESSGGGTTSCCSEEEECTTCEEEEEEETT---TTEEEEEEEEEETTEEEEEEEE
T ss_pred ccccccceeEEEEEeCCEEEE-----EcCHHHhcCCCceEEecCccEEecccccc---cceeeEEEecCCCCcceeeeee
Confidence 566889999999999999999 999998 7899999999999987 5543 67999998654 67899999
Q ss_pred cCCHHHHHHHHHHHHHhHhhccCCCcccccccccC-CCCCCCCCcCCC
Q psy407 87 ADTRESMIQWMNALSLASILQNSSTGWEDRRLNNE-DNDSGFHGTYGR 133 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~ 133 (160)
|+||+++.+||+||+.|++++++ +|.++.+| +++.++..||++
T Consensus 111 cdsE~QYa~WMAAcrLAskGkTm----ADsSy~sEv~~il~fL~mq~~ 154 (165)
T 4bbk_A 111 CDHEDQYARWMAACILASKGKTM----ADSSYQPEVISILSFLKMKNR 154 (165)
T ss_dssp ESSHHHHHHHHHHHHHHHTTCCT----TSTTHHHHHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHhhhcccccch----hhhhhhHHHHHHHHHHhccCC
Confidence 99999999999999999999988 67777777 677888889885
No 9
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.90 E-value=7.5e-23 Score=149.78 Aligned_cols=98 Identities=22% Similarity=0.288 Sum_probs=78.3
Q ss_pred ccceEEEEecCCCCCCceEEEEEEe---CCeEEEcccCCCCC----CccCccceEEEcCC-eEEEecCCCCccCceeeEE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLA---THVMVFSPEISGLG----FEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFK 74 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~---~~~L~y~~~~yYk~----~~e~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~ 74 (160)
+.|+|..-. ....+.||||||||+ +..|+| |++ +.+.+++|.|+|.. ++|..+......+++|+|.
T Consensus 17 ~~G~L~K~g-~~~~k~WkrRwFvL~~~~~~~L~Y-----~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~ 90 (126)
T 1v5p_A 17 ICGFLDIED-NENSGKFLRRYFILDTQANCLLWY-----MDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFV 90 (126)
T ss_dssp EECCEEEEC-TTCSSCEEEEEEEEETTTTEEEEE-----SSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEE
T ss_pred eEEEEEEeC-CCCCCCccceEEEEecCCCCEEEE-----ECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEE
Confidence 347766543 345789999999999 668888 999 56789999999998 5787765333346789998
Q ss_pred EeeCCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 75 AEHANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 75 i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
|.+ ..|+|+|+|+|++||++||++|+.|+...
T Consensus 91 i~t-~~r~y~l~A~s~~e~~~Wi~al~~a~~~~ 122 (126)
T 1v5p_A 91 INA-LSQRYFLQANDQKDLKDWVEALNQASKSG 122 (126)
T ss_dssp EEC-SSCEEEEECSSHHHHHHHHHHHHHTTTTS
T ss_pred EEC-CCEEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 865 56999999999999999999999997554
No 10
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.89 E-value=3.8e-23 Score=148.72 Aligned_cols=100 Identities=37% Similarity=0.621 Sum_probs=85.2
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
+.|+|..... ...+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+...+..+++|+|.|.+++.++
T Consensus 23 ~~G~L~K~~~-~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 96 (128)
T 2dkp_A 23 RRGWLYKQDS-TGMKLWKKRWFVLSDLCLFY-----YRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRT 96 (128)
T ss_dssp EEEEEEEECC-SSSCCEEEEEEEEETTEEEE-----ESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCC
T ss_pred EEEEEEEeCC-CCCCCceeEEEEEeCCEEEE-----ECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCE
Confidence 5677765433 25788999999999999999 99999999999999999998876543334788999999877789
Q ss_pred EEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 83 YYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
|+|+|+|++|+++||.+|+.|+..+.
T Consensus 97 ~~l~a~s~~e~~~Wi~al~~a~~~~~ 122 (128)
T 2dkp_A 97 YYFCTDTGKEMELWMKAMLDAALVQT 122 (128)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999987554
No 11
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=7.2e-23 Score=146.15 Aligned_cols=98 Identities=29% Similarity=0.518 Sum_probs=83.1
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
+.|+|.... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+...+..+++|+|.|.+++.++
T Consensus 24 ~~G~L~K~~-~~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~ 97 (122)
T 2yry_A 24 KAGWLFKQA-SSGVKQWNKRWFVLVDRCLFY-----YKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRT 97 (122)
T ss_dssp EEEEEEEEC-CSSSCCEEEEEEEEETTEEEE-----ESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCE
T ss_pred EEEEEEEEC-CCCCCCcEEEEEEEeCCEEEE-----ECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcE
Confidence 456666443 235689999999999999999 99999999999999999988777544445788999998777799
Q ss_pred EEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 83 YYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
|+|+|+|++|+.+||.+|+.|+..
T Consensus 98 ~~l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 98 YFFSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHCC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999754
No 12
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.89 E-value=6.8e-23 Score=146.44 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=73.5
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEE--ecCCCCccCceeeEEEeeCCceEEEEEcCCHHH
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKIS--PCSSDDKVFRKFSFKAEHANMRTYYFAADTRES 92 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~--~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e 92 (160)
+.+.||+|||||++++|+| |+++++..|.|.|+|.++.+. .... ..+++|+|+|.+++.++|+|+|+|++|
T Consensus 16 ~~k~Wk~rwfvL~~~~L~~-----yk~~~~~~p~~~i~l~~~~~~~~~~~~--~~~r~~~F~l~~~~~~~y~f~A~s~ee 88 (112)
T 3cxb_B 16 GKEHWKTCFVVLSNGILYQ-----YPDRTDVIPLLSVNMGGEQCGGCRRAN--TTDRPHAFQVILSDRPCLELSAESEAE 88 (112)
T ss_dssp SCCCCEEEEEEEETTEEEE-----ESSSSCCSCSEEEETTC-CEEEEEECC--CSSCTTEEEEEETTSCCEEEECSSHHH
T ss_pred CCCCceEEEEEEECCEEEE-----ECCCCCCCccceEEecCCEEEeeeccC--CCCCCeEEEEEcCCCCEEEEEcCCHHH
Confidence 5788999999999999999 999999999999999986554 2222 237899999998777899999999999
Q ss_pred HHHHHHHHHHhHhhc
Q psy407 93 MIQWMNALSLASILQ 107 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~~ 107 (160)
|++||++|+.|+...
T Consensus 89 ~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 89 MAEWMQHLCQAVSKG 103 (112)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999987543
No 13
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.89 E-value=7.3e-23 Score=149.61 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=78.1
Q ss_pred EecCCCCCC-ceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc-------e
Q psy407 10 LNDNMASTL-CHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM-------R 81 (160)
Q Consensus 10 ~~~~~~~k~-WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~-------r 81 (160)
.++.+..+. ||+|||||++.||+| ||++++.+++|.|+|.++.|..+.+. ...++|+|+|.+++. +
T Consensus 20 k~~~g~~k~~wk~rWFVLt~~~L~y-----yKd~~eke~~G~IpL~~~~vr~v~~~-~~~rk~~F~l~~~d~r~v~~~h~ 93 (125)
T 1dyn_A 20 INNIGIMKGGSKEYWFVLTAENLSW-----YKDDEEKEKKYMLSVDNLKLRDVEKG-FMSSKHIFALFNTEQRNVYKDYR 93 (125)
T ss_dssp ESCCCGGGTSSEEEEEEEESSEEEE-----ESSTTCSCEEEEEECTTEEEEECCSC-SSSSCEEEEEEETTSSCSSTTCS
T ss_pred EecCccccCCceeeEEEEeccceee-----ecCCcccccceEEECCCceEeccCCC-CCCCceEEEEECCCCccccccce
Confidence 344567775 999999999999999 99999999999999999999887653 237899999998753 5
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|.|+|+|.+||.+||++|.+|.
T Consensus 94 ~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 94 QLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp SEEEEESSHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCHHHHHHHHHHHHhCc
Confidence 99999999999999999998875
No 14
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=1.1e-22 Score=143.22 Aligned_cols=91 Identities=16% Similarity=0.216 Sum_probs=79.1
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc-CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE-EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM 80 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~ 80 (160)
++.|+|... ..+.|++|||||+++.|+| |+++.+ ..+.+.|+|.+|.|..... .+++|+|+|.+++.
T Consensus 9 ~~~G~L~K~----~~k~Wk~RwfvL~~~~L~y-----yk~~~~~~~~~~~i~l~~~~v~~~~~---~~~~~~F~i~~~~~ 76 (107)
T 2cof_A 9 ETSSYLNVL----VNSQWKSRWCSVRDNHLHF-----YQDRNRSKVAQQPLSLVGCEVVPDPS---PDHLYSFRILHKGE 76 (107)
T ss_dssp TTCCEEEEE----ETTEEEEEEEEECSSCEEE-----ECSSTTCSEEEEEECTTTCEEECCCB---TTBSCEEEEEETTE
T ss_pred cEeEEEEEe----cCCCcceEEEEEECCEEEE-----EeCCcccCCCeeEEeccceEEEECCC---CCCCeEEEEEeCCC
Confidence 577888876 6789999999999999999 998864 5677888889998877643 36789999998878
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 81 RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
++|+|+|+|++|+.+||.+|+.|+
T Consensus 77 r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 77 ELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHS
T ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999986
No 15
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.89 E-value=1.9e-22 Score=144.11 Aligned_cols=98 Identities=37% Similarity=0.542 Sum_probs=83.4
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
+.|+|.... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+......+++|+|.|.+++.++
T Consensus 13 ~~G~L~K~~-~~~~~~WkkR~fvL~~~~L~y-----y~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~ 86 (123)
T 1upq_A 13 IRGWLHKQD-SSGLRLWKRRWFVLSGHCLFY-----YKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRT 86 (123)
T ss_dssp EEEEEEEEC-SSSSCCEEEEEEEEETTEEEE-----ESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCC
T ss_pred EEEEEEeeC-CCCCCCceeEEEEEeCCEEEE-----ECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeE
Confidence 457776654 235689999999999999999 99999999999999999999887543334689999999877789
Q ss_pred EEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 83 YYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
|+|+|+|++|+.+||.+|+.|+..
T Consensus 87 ~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 87 YVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999754
No 16
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.89 E-value=5.4e-22 Score=140.20 Aligned_cols=99 Identities=16% Similarity=0.178 Sum_probs=82.5
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
+.|+|.. .....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.+...... ..+++|+|+|.+++.++
T Consensus 7 ~~G~L~K--~g~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~~~~~~~~-~~~~~~~F~i~~~~~r~ 78 (113)
T 1pls_A 7 REGYLVK--KGSVFNTWKPMWVVLLEDGIEF-----YKKKSDNSPKGMIPLKGSTLTSPCQD-FGKRMFVFKITTTKQQD 78 (113)
T ss_dssp EEEEEEE--ESSSSSCCEEEEEEEETTEEEE-----ESSTTCSSCSEEEESSSCCEESSCCS-SCCSSSEEEEEETTTEE
T ss_pred EEEEEEE--eCCCCCCceEEEEEEECCEEEE-----EeCCCCCCcceEEEcCCCEEEEecCC-CCCCccEEEEEcCCCCE
Confidence 4577753 3446789999999999999999 99998899999999999987652221 23678999999887799
Q ss_pred EEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 83 YYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
|+|+|+|++|+.+||.+|+.|+.....
T Consensus 79 ~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 105 (113)
T 1pls_A 79 HFFQAAFLEERDAWVRDINKAIKCIEG 105 (113)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999865543
No 17
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=4.2e-22 Score=140.72 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=81.1
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeC----
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA---- 78 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~---- 78 (160)
+.|+|... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+.......++|+|+|.++
T Consensus 10 ~~G~L~K~--g~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~ 82 (118)
T 1v89_A 10 KMGWLKKQ--RSIVKNWQQRYFVLRAQQLYY-----YKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQ 82 (118)
T ss_dssp EEEEEEEE--CSSSSCEEEEEEEEETTEEEE-----ESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSS
T ss_pred EEEEEEec--CCCCCCccEEEEEEECCEEEE-----EeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCcccc
Confidence 56777654 345678999999999999999 9999999999999999999876543323367899999873
Q ss_pred ---CceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 79 ---NMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 79 ---~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
..++|+|+|+|++|+.+||.+|+.|+.
T Consensus 83 ~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 83 NRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 568999999999999999999999974
No 18
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=3.4e-22 Score=138.97 Aligned_cols=98 Identities=12% Similarity=0.253 Sum_probs=82.9
Q ss_pred ccceEEEEecCCC--CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-CCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNMA--STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~~--~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~~~~~~~~~F~i~~~~ 79 (160)
+.|+|.....+.+ .+.|++|||||+++.|+| |+++.+..|.|.|+|.+|.|..++. ....+++|+|.|.+++
T Consensus 5 ~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~ 79 (108)
T 1u5d_A 5 KQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYY-----YANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQD 79 (108)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEEEETTEEEE-----ESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSS
T ss_pred EEEEEEEcCCCCCccccCceeeEEEEeCCEEEE-----ecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCC
Confidence 5678877766543 289999999999999999 9999999999999999999877532 1123678999999877
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.++|+|+|+|++|+.+||.+|+.|+.
T Consensus 80 ~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 80 RRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999864
No 19
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.88 E-value=3.2e-22 Score=146.29 Aligned_cols=97 Identities=11% Similarity=0.103 Sum_probs=78.3
Q ss_pred CccceEEEEe--cCC--CCCCceEEEEEEeCCeEEEcccCCCCCCc-----------cCccceEEEcCCeEEEecCCCCc
Q psy407 2 DHVCFLIILN--DNM--ASTLCHNVYLLLATHVMVFSPEISGLGFE-----------EEKLLGSILLPSYKISPCSSDDK 66 (160)
Q Consensus 2 ~~~~~~~~~~--~~~--~~k~WkkRWFVL~~~~L~y~~~~yYk~~~-----------e~~~~g~I~L~~~~V~~~~~~~~ 66 (160)
++.|+|..-+ +.+ ..+.|++|||||+++.|+| ||++. +..|.|.|+|.+|.|..+.+ .
T Consensus 13 ~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~y-----ykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~--~ 85 (129)
T 2p0d_A 13 EKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVF-----YREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRH--L 85 (129)
T ss_dssp EEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEE-----ESCC--------------CCSEEEECTTCEEEECTT--S
T ss_pred eEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEE-----EcCcccccccccccccCCCCccEEEeCCcEEEECCC--C
Confidence 3567776521 111 2389999999999999999 99984 56899999999999877533 2
Q ss_pred cCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 67 VFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 67 ~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.+++|+|+|.+++.++|+|+|+|++||++||.+|+.|+.
T Consensus 86 ~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~ 124 (129)
T 2p0d_A 86 SSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIE 124 (129)
T ss_dssp CSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 478899999988778999999999999999999999874
No 20
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=3.2e-22 Score=143.58 Aligned_cols=96 Identities=14% Similarity=0.165 Sum_probs=81.4
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCC--eEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATH--VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~--~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
++.|+|.....+...+.||+|||||+++ .|+| |+++.+..++|.|+|.++.+..... .++++|+|.++
T Consensus 9 ~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Y-----y~~~~~~~~~g~I~L~~~~~~~~~~----~~~~~F~i~~~- 78 (119)
T 2dhk_A 9 KLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYY-----SRTAQDANPLDSIDLSSAVFDCKAD----AEEGIFEIKTP- 78 (119)
T ss_dssp CCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEE-----ESSTTCCSCSEEEEGGGCEEEECTT----GGGCEEEEECS-
T ss_pred cEEEEEEecCCCCCCCCceeEEEEEECCccEEEE-----ECCCCCcccccEEECCCCEEEecCC----CCCCEEEEEeC-
Confidence 4677877665545678999999999998 9999 9999998999999999988765322 56789999876
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.|+|+|+|+|++|+++||.+|+.|+...
T Consensus 79 ~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (119)
T 2dhk_A 79 SRVITLKAATKQAMLYWLQQLQMKRWEF 106 (119)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999997543
No 21
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.88 E-value=6.5e-22 Score=141.63 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=81.4
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC--
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-- 79 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-- 79 (160)
++.|+|... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|.|..+... +++++|.|.+++
T Consensus 6 ~~~G~L~K~--g~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~---~~~~~f~i~~~~~~ 75 (127)
T 1fgy_A 6 DREGWLLKL--GGRVKTWKRRWFILTDNCLYY-----FEYTTDKEPRGIIPLENLSIREVLDP---RKPNCFELYNPSHK 75 (127)
T ss_dssp SEEEEEEEE--CSSSCCEEEEEEEEETTEEEE-----ESSTTCSSCSEEEECTTCEEEEECCS---SCSSEEEEECSSST
T ss_pred ceEeEEEEE--CCCCCCeEEEEEEEECCEEEE-----eCCCCCCCcceEEECCceEEEEccCC---CCCceEEEecCCcc
Confidence 567888655 445788999999999999999 99998899999999999998877542 678999998653
Q ss_pred -------------------ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 80 -------------------MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 80 -------------------~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.++|+|+|+|++|+.+||.+|+.|+..
T Consensus 76 ~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 76 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp TCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 369999999999999999999998743
No 22
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.88 E-value=7.6e-22 Score=138.01 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=78.2
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCC--eEEEcccCCCCCCccCccceEEEcCCeEEEecCCCC---ccCceeeEEEee
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATH--VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDD---KVFRKFSFKAEH 77 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~--~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~---~~~~~~~F~i~~ 77 (160)
+.|+|... ....+.|++|||||+++ .|+| |+++.+..|.|.|+|.+|.|..+.... ..+++++|.|.+
T Consensus 9 ~~G~L~K~--g~~~~~Wk~R~fvL~~~~~~L~y-----yk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~ 81 (109)
T 2i5f_A 9 KQGCLLKQ--GHRRKNWKVRKFILREDPAYLHY-----YDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT 81 (109)
T ss_dssp EEEEEEEE--CTTTCCEEEEEEEEETTTTEEEE-----ECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEEC
T ss_pred EEEEEEEc--CCCCCCceEEEEEEeCCCcEEEE-----ECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEe
Confidence 56777653 33567899999999986 9999 999988999999999999887654310 124789999998
Q ss_pred CCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 78 ANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 78 ~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
++.++|+|+|+|++|+.+||.+|+.|+
T Consensus 82 ~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 82 ADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp TTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 877889999999999999999999986
No 23
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=3.9e-22 Score=150.18 Aligned_cols=99 Identities=10% Similarity=0.037 Sum_probs=80.7
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
++.|+|.. ...+.+.||+|||||++++|+| |+++.+..+.|.|+|.++++..+.... .++.++|+|.++ .+
T Consensus 19 ~keG~L~K--kg~~~k~WkrRWFvLk~~~L~Y-----yk~~~d~~~~g~I~L~~~~~~~~~~~~-~~~~~~F~I~t~-~r 89 (149)
T 1x1f_A 19 YFEGFLLI--KRSGYREYEHYWTELRGTTLFF-----YTDKKSIIYVDKLDIVDLTCLTEQNST-EKNCAKFTLVLP-KE 89 (149)
T ss_dssp EEEEEEEE--ECTTCCSCEEEEEEEETTEEEE-----ESCSSCSSCSEECCCSSCCEEEECCCT-TSCCCEEEEECS-SC
T ss_pred cEEEEEEE--eCCCCCCceeEEEEEcCCEEEE-----EeCCCccccCcEEECCCceEEeeccCC-CCcCcEEEEEcC-CC
Confidence 35677764 4467799999999999999999 999999999999999998765332211 145789999876 48
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 82 TYYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
+|+|+|+|++||++||.||+.++....+
T Consensus 90 ~~~f~A~s~ee~~eWi~aI~~v~~~~~p 117 (149)
T 1x1f_A 90 EVQLKTENTESGEEWRGFILTVTELSVP 117 (149)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHSSCC
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHcccCC
Confidence 9999999999999999999998765443
No 24
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.87 E-value=2.2e-22 Score=146.16 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=79.3
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc---------CccceEEEcCCeEEEecCCCCccCceee
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE---------EKLLGSILLPSYKISPCSSDDKVFRKFS 72 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---------~~~~g~I~L~~~~V~~~~~~~~~~~~~~ 72 (160)
++.|.|.... ...+.||+|||||++++|+| |+++.+ ..+.|.|+|.+|+|..+.+ +..+++|+
T Consensus 13 ~k~G~L~K~g--~~~k~Wk~RwfVL~~~~L~y-----yk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~-~~~~k~~~ 84 (124)
T 2w2x_D 13 KQQGELYMWD--SIDQKWTRHFCAIADAKLSF-----SDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQ-GKNQKSFV 84 (124)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEEEEETTEEEE-----EEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTT-CBTTBSEE
T ss_pred ceeEEEEEEC--CCCCCceEeEEEEECCEEEE-----EcccccccccccccCCccccEEECCCCEEEEccC-CcCCCCEE
Confidence 5778887643 46789999999999999999 997543 2358999999999988754 23478999
Q ss_pred EEEeeCC--ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 73 FKAEHAN--MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 73 F~i~~~~--~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
|+|.+++ .++|+|+|+|++|+.+||+||+.|+.
T Consensus 85 F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 85 FILEPKQQGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp EEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 9998864 47899999999999999999999863
No 25
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.87 E-value=2.4e-22 Score=145.73 Aligned_cols=98 Identities=20% Similarity=0.341 Sum_probs=80.9
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc---CccceEEEcCCeE---EEecCCCCccCceeeEEE
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE---EKLLGSILLPSYK---ISPCSSDDKVFRKFSFKA 75 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~---V~~~~~~~~~~~~~~F~i 75 (160)
++.|+|.......+.+.|++|||||++++|+| |+++.+ ..|.|.|+|.+|. |...+. +..+++|+|+|
T Consensus 6 ~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~y-----yk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~-~~~~~~~~F~i 79 (134)
T 2y7b_A 6 EERGFLTIFEDVSGFGAWHRRWCVLSGNCISY-----WTYPDDEKRKNPIGRINLANCTSRQIEPANR-EFCARRNTFEL 79 (134)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEEEETTEEEE-----ESSHHHHTTSCCSEEEEGGGBCSSSCEECCT-TTCCCTTEEEE
T ss_pred eEEeeEEEEcCCCCCCCcEEEEEEEECCEEEE-----ECCCCcccccCceEEEEhhhCccccccccch-hhccCCCEEEE
Confidence 57899998866677889999999999999999 997655 7899999999988 444432 22468899999
Q ss_pred ee--CC-----------------ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 76 EH--AN-----------------MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 76 ~~--~~-----------------~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.+ +. .++|+|+|+|++|+.+||.+|+.|+.
T Consensus 80 ~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~ 128 (134)
T 2y7b_A 80 ITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLV 128 (134)
T ss_dssp EEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 86 32 15899999999999999999999874
No 26
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.87 E-value=1.2e-21 Score=145.21 Aligned_cols=99 Identities=12% Similarity=0.176 Sum_probs=82.4
Q ss_pred ccceEEEEecCC--CCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCC-CccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNM--ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSD-DKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~--~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~-~~~~~~~~F~i~~~~ 79 (160)
+.|+|.....+. ..+.|++|||||+++.|+| |+++.+..+.|.|+|.+|+|..+... ...++.|+|.|.+++
T Consensus 19 ~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~y-----yk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~ 93 (148)
T 1u5f_A 19 KAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYY-----YGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD 93 (148)
T ss_dssp EEEEEEEECCCSSCSSCSEEEEEEEEETTEEEE-----ESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTT
T ss_pred EEEEEEEeCCCCCCcCCCceeEEEEEECCEEEE-----EcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCC
Confidence 567777765543 3478999999999999999 99999999999999999998765421 123567999999877
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.++|+|+|+|++|+.+||.+|+.|+..
T Consensus 94 ~r~~~l~a~s~~e~~~Wi~al~~~i~~ 120 (148)
T 1u5f_A 94 KRIYQFTAASPKDAEEWVQQLKFILQD 120 (148)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHCC-
T ss_pred CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999743
No 27
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.86 E-value=6.6e-22 Score=146.52 Aligned_cols=96 Identities=21% Similarity=0.245 Sum_probs=81.8
Q ss_pred CccceEEEEecC----CCCCCceEEEEEEeCC-----eEEEcccCCCCCCc-cCccceEEEcCCeEEEecCCCCccCcee
Q psy407 2 DHVCFLIILNDN----MASTLCHNVYLLLATH-----VMVFSPEISGLGFE-EEKLLGSILLPSYKISPCSSDDKVFRKF 71 (160)
Q Consensus 2 ~~~~~~~~~~~~----~~~k~WkkRWFVL~~~-----~L~y~~~~yYk~~~-e~~~~g~I~L~~~~V~~~~~~~~~~~~~ 71 (160)
.+.|+|.....+ ...+.|++|||||++. .|+| |+++. +..|.|.|+|.+|.+..... .+++|
T Consensus 19 ~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~y-----y~~~~~~~~~~g~I~L~~~~~~~~~~---~~~~~ 90 (150)
T 1wg7_A 19 TKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNF-----YKDEKISKEPKGSIFLDSCMGVVQNN---KVRRF 90 (150)
T ss_dssp CCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEE-----ESSSCCSSCCSEEECTTTCCEECCCC---SSCTT
T ss_pred eEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEE-----ECCCCCCCCcCcEEecccCEEEecCC---CCCce
Confidence 467888776543 3457899999999986 9999 99887 78899999999998876543 36789
Q ss_pred eEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 72 SFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 72 ~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|.|.+++.++|+|+|+|++|+.+||.+|+.|+.
T Consensus 91 ~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 91 AFELKMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp EEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 9999988778999999999999999999999875
No 28
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.86 E-value=2.7e-21 Score=139.57 Aligned_cols=97 Identities=19% Similarity=0.225 Sum_probs=80.3
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCC--eEEEcccCCCCCCccCccceEEEcCCeEEEecCCC-C--ccCceeeEEEee
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATH--VMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSD-D--KVFRKFSFKAEH 77 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~--~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~-~--~~~~~~~F~i~~ 77 (160)
+.|+|.. .....+.|++|||||+++ +|+| |+++.+..|.|.|+|.+|.|..+... + ..+++++|.|.+
T Consensus 20 ~~G~L~K--~g~~~~~Wk~R~fvL~~~~~~L~y-----y~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~ 92 (129)
T 1x05_A 20 KQGCLLK--QGHRRKNWKVRKFILREDPAYLHY-----YDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIIT 92 (129)
T ss_dssp EEEEEEE--CCSSCCCCEEEEEEEEETTTEEEE-----ECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEEC
T ss_pred EEEEEEe--cCCCCCCCeeEEEEEeCCCCEEEE-----ECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEc
Confidence 5677765 333567899999999975 8999 99998899999999999998775432 1 124789999998
Q ss_pred CCceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 78 ANMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 78 ~~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
++.++|+|+|+|++|+.+||.+|+.|+..
T Consensus 93 ~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 93 ADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp TTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 87788999999999999999999999753
No 29
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.86 E-value=2.1e-21 Score=133.35 Aligned_cols=91 Identities=18% Similarity=0.270 Sum_probs=75.8
Q ss_pred CCccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeC
Q psy407 1 MDHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA 78 (160)
Q Consensus 1 ~~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~ 78 (160)
++..|+|... ....+.||+|||||+++.|+| |+++.+ ..+.|.|+|.+|.+.... ..+++|.|.++
T Consensus 1 V~k~G~L~K~--g~~~k~WkkR~FvL~~~~L~Y-----y~~~~~~~~~~~~~i~l~~~~~~~~~-----~~~~~F~i~~~ 68 (94)
T 2rsg_A 1 VERCGVLSKW--TNYIHGWQDRWVVLKNNALSY-----YKSEDETEYGCRGSICLSKAVITPHD-----FDECRFDISVN 68 (94)
T ss_dssp CCEEEEEEEE--SSSTTCEEEEEEEEETTEEEE-----ESSTTGGGTCCSEEEETTTCEEEECS-----SCSSEEEEEET
T ss_pred CCEEEEEEEe--CCCCCCceEEEEEEECCEEEE-----EEecccccccceeeEecceeeeecCc-----ccceeEEEEeC
Confidence 3567887653 456789999999999999999 987765 458999999999876643 34679999886
Q ss_pred CceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 79 NMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 79 ~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.++|+|+|+|++|+++||+||++|.
T Consensus 69 -~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 69 -DSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp -TEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred -CeEEEEECCCHHHHHHHHHHHHhhc
Confidence 4899999999999999999999873
No 30
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.86 E-value=3.8e-21 Score=139.88 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=74.9
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc---cCccceEEEcCCeEEEecCCCCc------cCceeeE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE---EEKLLGSILLPSYKISPCSSDDK------VFRKFSF 73 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~---e~~~~g~I~L~~~~V~~~~~~~~------~~~~~~F 73 (160)
+.|+|.. +....+.|++|||||++++|+| ||+++ +..|+|+|+|.+|+|..+..++. ..+.+.|
T Consensus 8 k~G~L~K--k~~~~k~W~~rwfVL~~~~L~y-----yK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F 80 (120)
T 4a6h_A 8 KSGFLER--RSKFLKSYSKGYYVLTPNFLHE-----FKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKF 80 (120)
T ss_dssp EEEEEEE--EETTTTEEEEEEEEECSSEEEE-----ESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEE
T ss_pred EEEEEEE--cCCCCCCCccEEEEEeCCEEEE-----EcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEE
Confidence 3466654 3336789999999999999999 99875 56699999999999988654321 0156778
Q ss_pred EEeeCC------ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 74 KAEHAN------MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 74 ~i~~~~------~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.|...+ .++|+|+|+|.+||++||++|+.++
T Consensus 81 ~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 81 VLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 877654 3699999999999999999999986
No 31
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=2.1e-21 Score=141.60 Aligned_cols=96 Identities=13% Similarity=0.072 Sum_probs=76.7
Q ss_pred ccceEEEEecCCCCCCceEEEEEE-eCCeEEEcccCCCCCCccCccceEEEcCC-e-EEEe------cCCCCccCceeeE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLL-ATHVMVFSPEISGLGFEEEKLLGSILLPS-Y-KISP------CSSDDKVFRKFSF 73 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL-~~~~L~y~~~~yYk~~~e~~~~g~I~L~~-~-~V~~------~~~~~~~~~~~~F 73 (160)
+.|+|... ....+.|||||||| ++++|+| |+++.+..+.|.|.|.. | .|.. +...+..+++++|
T Consensus 10 ~~G~L~K~--g~~~k~WkkRwFVL~~~~~L~Y-----yk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F 82 (130)
T 2d9v_A 10 RGGWLWRQ--SSILRRWKRNWFALWLDGTLGY-----YHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLL 82 (130)
T ss_dssp EEEEEEEE--CSSSCCEEEEEEEEETTTEEEE-----ESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEE
T ss_pred EEEEEEee--cCccCCceeeEEEEccCCEEEE-----EeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEE
Confidence 45777654 44678999999999 7999999 99998888999998863 3 3332 2222223678999
Q ss_pred EEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 74 KAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 74 ~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|.+++.|+|+|+|+|++||++||+||+.|..
T Consensus 83 ~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 83 TVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp EEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 99987678999999999999999999999964
No 32
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=2.2e-21 Score=139.13 Aligned_cols=94 Identities=16% Similarity=0.253 Sum_probs=78.8
Q ss_pred CccceEEEEecCCCCCCceEEEEEEe--CCeEEEcccCCCCCCccC--ccceEEEcCCeEEEecCCCCccCceeeEEEee
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLA--THVMVFSPEISGLGFEEE--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEH 77 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~--~~~L~y~~~~yYk~~~e~--~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~ 77 (160)
.+.|+|.... ...+.||+|||||+ ++.|+| |+++.+. .++|.|+|.+|.|.... .++++|.|.+
T Consensus 9 ~~~G~L~K~~--~~~~~Wk~R~fvL~~~~~~L~Y-----yk~~~~~~~~~~g~I~L~~~~v~~~~-----~~~~~F~i~~ 76 (120)
T 2d9x_A 9 NVYGYLMKYT--NLVTGWQYRFFVLNNEAGLLEY-----FVNEQSRNQKPRGTLQLAGAVISPSD-----EDSHTFTVNA 76 (120)
T ss_dssp CCEEEEEEEE--ETTTEEEEEEEEECTTTCEEEE-----ESSGGGSSSCCSEEEECTTCCEECCS-----SSSSCEEECC
T ss_pred cEEEEEEecC--CCCCCceEEEEEEECCCCEEEE-----EecCcccCCCccceEEcceEEEEecC-----CCCCEEEEEc
Confidence 4567777654 36789999999999 579999 9998874 79999999999876542 4568999998
Q ss_pred CCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 78 ANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 78 ~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
++.++|+|+|+|++|+++||.+|+.|+...
T Consensus 77 ~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 106 (120)
T 2d9x_A 77 ASGEQYKLRATDAKERQHWVSRLQICTQHH 106 (120)
T ss_dssp SSSCCEEECCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 766899999999999999999999987554
No 33
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.85 E-value=3.9e-21 Score=135.53 Aligned_cols=96 Identities=10% Similarity=0.159 Sum_probs=77.6
Q ss_pred CccceEEEEecCCCCCCceEEEEEE-eCCeEEEcccCCCCCCccCccceEEEcCCeEEEe-----cC---CCCccCceee
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLL-ATHVMVFSPEISGLGFEEEKLLGSILLPSYKISP-----CS---SDDKVFRKFS 72 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL-~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~-----~~---~~~~~~~~~~ 72 (160)
.+.|+|... ....+.||+||||| .++.|+| |+++.+..+.|.|+|....|.. +. ..+...++++
T Consensus 6 ~~~G~L~K~--g~~~k~WkkR~fvL~~~~~L~y-----yk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~ 78 (112)
T 3aj4_A 6 VKSGWLLRQ--STILKRWKKNWFDLWSDGHLIY-----YDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCM 78 (112)
T ss_dssp SEEEEEEEE--CSSSCCEEEEEEEECTTSEEEE-----ESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGE
T ss_pred eEEEEEEee--CCCCCCeeceEEEEeeCCEEEE-----EcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcE
Confidence 467888765 33678999999999 7889999 9999989999999998755431 11 2222245789
Q ss_pred EEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 73 FKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 73 F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
|.|.+++.++|+|+|+|++|+.+||.+|+.|.
T Consensus 79 F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 79 LQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 99998778999999999999999999999985
No 34
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.85 E-value=4.6e-21 Score=133.40 Aligned_cols=83 Identities=24% Similarity=0.253 Sum_probs=71.1
Q ss_pred CCCCCceEEEEEEeCCeEEEcccCCCCCCcc----C--ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEc
Q psy407 14 MASTLCHNVYLLLATHVMVFSPEISGLGFEE----E--KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e----~--~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
...+.|++|||||++++|+| |+++.+ . .+.+.|+|.+|.|...... .+++|+|+|.+++.++|+|+|
T Consensus 18 ~~~~~Wk~rwfvL~~~~L~y-----yk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~--~~~~~~F~i~~~~~~~~~~~A 90 (106)
T 1btn_A 18 ASSRSWHNVYCVINNQEMGF-----YKDAKSAASGIPYHSEVPVSLKEAICEVALDY--KKKKHVFKLRLSDGNEYLFQA 90 (106)
T ss_dssp CSCCCCEEEEEEEETTEEEE-----ESSHHHHHHTCCSSSCCCEECTTCEEEECSSC--CSSSSEEEEECTTSCEEEEEC
T ss_pred CCCCChhEEEEEEECCEEEE-----EeCCcccccCCCCCCcceEECCCCEEEEcccc--cCCccEEEEEecCCCEEEEEC
Confidence 56788999999999999999 998874 1 3677899999988765432 368899999987779999999
Q ss_pred CCHHHHHHHHHHHHHh
Q psy407 88 DTRESMIQWMNALSLA 103 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a 103 (160)
+|++||.+||.+|+.|
T Consensus 91 ~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 91 KDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999999999975
No 35
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.85 E-value=3.6e-21 Score=147.17 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=77.0
Q ss_pred ccceEEEEecC---CCCCCceEEEEEEeCCeEEEcccCCCCC----CccCccceEEEcCCeE-EEecC--CCCccCce--
Q psy407 3 HVCFLIILNDN---MASTLCHNVYLLLATHVMVFSPEISGLG----FEEEKLLGSILLPSYK-ISPCS--SDDKVFRK-- 70 (160)
Q Consensus 3 ~~~~~~~~~~~---~~~k~WkkRWFVL~~~~L~y~~~~yYk~----~~e~~~~g~I~L~~~~-V~~~~--~~~~~~~~-- 70 (160)
+.|+|+.-... .+.+.||+|||||++++|+| |++ +.+.+++|.|+|.++. |+.+. +....+++
T Consensus 5 keG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Y-----yk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~ 79 (169)
T 1btk_A 5 LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSY-----YEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIP 79 (169)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEE-----EEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC-
T ss_pred EEEEEEEecCCCCCcccCCCceEEEEEcCCEEEE-----EecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccc
Confidence 45777764322 34578999999999999999 998 5678999999999976 45552 11222333
Q ss_pred -------------------eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 71 -------------------FSFKAEHANMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 71 -------------------~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
|+|+|.+++ ++|||+|+|++|+++||++|+.++..
T Consensus 80 ~~~~~~~~~~~~~i~~~~~~~F~I~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 80 RRGEESSEMEQISIIERFPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp --------CCTTHHHHCCCEEEEEEETT-CCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred cccCcccccccccccccccccEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 899999875 79999999999999999999999753
No 36
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.85 E-value=6.7e-21 Score=136.93 Aligned_cols=99 Identities=19% Similarity=0.160 Sum_probs=79.2
Q ss_pred CccceEEEEec------CCCCCCceEEEEEEeCCeEEEcccCCCCCCccCc------cceEEEcCCeEEEecCCCCccCc
Q psy407 2 DHVCFLIILND------NMASTLCHNVYLLLATHVMVFSPEISGLGFEEEK------LLGSILLPSYKISPCSSDDKVFR 69 (160)
Q Consensus 2 ~~~~~~~~~~~------~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~------~~g~I~L~~~~V~~~~~~~~~~~ 69 (160)
++.|+|..-.. +.+.+.|++|||||++++|+| |+++.+.. +...|+|.+|.|..+.+. .++
T Consensus 9 ~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~y-----yk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~--~~r 81 (123)
T 1wjm_A 9 QMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGF-----YKDAKAASAGVPYHGEVPVSLARAQGSVAFDY--RKR 81 (123)
T ss_dssp CEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEE-----ESSHHHHTTTCBSSSCCCEECTTCEEEECTTC--SSC
T ss_pred EEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEE-----EEcccccccCcccCCCceEEccCcEEeecccc--cCC
Confidence 35677765332 224789999999999999999 99987642 345789999988776442 378
Q ss_pred eeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 70 KFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 70 ~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+|+|+|.+++.++|+|+|+|++||++||.+|+.|+...
T Consensus 82 ~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 82 KHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp SSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhcc
Confidence 99999998777899999999999999999999997543
No 37
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.85 E-value=5.3e-21 Score=132.99 Aligned_cols=88 Identities=15% Similarity=0.171 Sum_probs=74.2
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceE
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRT 82 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~ 82 (160)
|+|... ....+.|++|||||+++.|+| |+++.+ ..+.|.|+|.+|.|...+. .+++|.|.+++.++
T Consensus 3 G~L~K~--g~~~k~Wk~R~fvL~~~~L~Y-----y~~~~~~~~~~~g~i~L~~~~v~~~~~-----~~~~F~i~~~~~r~ 70 (103)
T 3rcp_A 3 GVLYKW--TNYLTGWQPRWFVLDNGILSY-----YDSQDDVCKGSKGSIKMAVCEIKVHSA-----DNTRMELIIPGEQH 70 (103)
T ss_dssp EEEEEE--CCTTTCEEEEEEEEETTEEEE-----ESSCC---CCCSCEEEGGGCEEECCTT-----CSSEEEEEETTTEE
T ss_pred eEEEEc--cCCCCCeeceEEEEECCEEEE-----EecCCcccCCcccEEEeeeeEEEEcCC-----CCceEEEEeCCCCE
Confidence 555443 345688999999999999999 999885 4699999999999876533 36789999887799
Q ss_pred EEEEcCCHHHHHHHHHHHHHhH
Q psy407 83 YYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 83 ~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
|+|+|+|++|+++||.+|+.|.
T Consensus 71 ~~l~a~s~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 71 FYMKAVNAAERQRWLVALGSSK 92 (103)
T ss_dssp EEEECSSHHHHHHHHHHHHTTS
T ss_pred EEEECCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999986
No 38
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.85 E-value=7.9e-21 Score=135.80 Aligned_cols=99 Identities=22% Similarity=0.303 Sum_probs=80.6
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCc
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANM 80 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~ 80 (160)
.+.|+|... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+|. |..+...+...++++|.|.++ .
T Consensus 15 ~~~G~L~K~--g~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~-~ 86 (125)
T 1eaz_A 15 IKAGYCVKQ--GAVMKNWKRRYFQLDENTIGY-----FKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTT-S 86 (125)
T ss_dssp SEEEEEEEE--CTTTCCEEEEEEEECSSEEEE-----ESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECS-S
T ss_pred cEEEEEEEe--CCCCCCcceEEEEEeCCEEEE-----EcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEeC-C
Confidence 356777654 345688999999999999999 9999999999999999975 544432222357899999875 5
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 81 RTYYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
++|+|+|+|++|+.+||.+|+.|+....
T Consensus 87 r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 87 RTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999986543
No 39
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.4e-20 Score=132.75 Aligned_cols=95 Identities=13% Similarity=0.206 Sum_probs=79.5
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC-eEEEecCCCCccCceeeEEEeeCCce
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
+.|+|... ....+.|++|||||+++.|+| |+++.+..+.|.|+|.+ +.|..++.. ..++++|.|.++ .+
T Consensus 10 ~~G~L~K~--~~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~~v~~~~~~--~~~~~~F~i~~~-~r 79 (115)
T 2dn6_A 10 KQGYMMKK--GHRRKNWTERWFVLKPNIISY-----YVSEDLKDKKGDILLDENCCVESLPDK--DGKKCLFLVKCF-DK 79 (115)
T ss_dssp EEEEEEEE--CTTSSCEEEEEEEECSSCEEE-----ESSTTCSSEEEEECCCTTCEEEEECCC--TTCCSEEEEECS-SC
T ss_pred EEEEEEec--CCCCCCcEEeEEEEECCEEEE-----eCCCCCcccCcEEEecCcEEEEECCCC--CCCeeEEEEEeC-CC
Confidence 56777653 336788999999999999999 99998899999999998 467666442 257899999876 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 82 TYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+|+|+|+|++|+.+||.+|+.|+...
T Consensus 80 ~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 80 TFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654
No 40
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.85 E-value=1.3e-20 Score=135.41 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=78.4
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCce
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
+.|+|.... ...+.|++|||||+++.|+| |+++.+..+.|.|+|.+|. |..... .+++|+|.|.++ .+
T Consensus 20 ~~G~L~K~g--~~~~~Wk~R~fvL~~~~L~y-----y~~~~~~~~~g~i~L~~~~~v~~~~~---~~~~~~F~i~~~-~r 88 (126)
T 1fao_A 20 KEGYLTKQG--GLVKTWKTRWFTLHRNELKY-----FKDQMSPEPIRILDLTECSAVQFDYS---QERVNCFCLVFP-FR 88 (126)
T ss_dssp EEEEEEEEC--SSSCCEEEEEEEEETTEEEE-----ESSTTCSSCSEEEEGGGCCEEEEECS---SSSSSEEEEEET-TE
T ss_pred EEEEEEEcC--CCCCCcccEEEEEECCEEEE-----eCCCCCCCceeEEEccceEEEEeccc---CCCCCEEEEEeC-Cc
Confidence 457776543 45788999999999999999 9999989999999999988 444332 367899999986 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 82 TYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
+|+|+|+|++|+.+||.+|+.|+..
T Consensus 89 ~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 89 TFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998754
No 41
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.85 E-value=3.6e-21 Score=138.67 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=77.6
Q ss_pred ccceEEEEecCCCCCCceEEEEEEe--CCeEEEcccCCCCCC-ccCccceEEEcCCeEEEecCCCC-cc-----CceeeE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLA--THVMVFSPEISGLGF-EEEKLLGSILLPSYKISPCSSDD-KV-----FRKFSF 73 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~--~~~L~y~~~~yYk~~-~e~~~~g~I~L~~~~V~~~~~~~-~~-----~~~~~F 73 (160)
+.|+|... ....+.||+|||||+ +..|+| |+++ .+..++|.|+|.+|.|..+...+ +. .++++|
T Consensus 20 ~~G~L~K~--g~~~~~Wk~R~fvL~~d~~~L~y-----y~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F 92 (129)
T 1x1g_A 20 KQGYLAKQ--GHKRKNWKVRRFVLRKDPAFLHY-----YDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLF 92 (129)
T ss_dssp EEEEEEEE--CSSSSSEEEEEEEEEESSCEEEE-----ECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCE
T ss_pred EEEEEEEE--CCCCCCeeeEEEEEeCCCCeEEE-----eCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceE
Confidence 46777654 333789999999999 469999 9987 67889999999999887664320 11 167999
Q ss_pred EEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 74 KAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 74 ~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|.+++.++|+|+|+|++|+.+||.+|+.|+
T Consensus 93 ~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 93 KVITKDDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp EECCTTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred EEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9998877889999999999999999999986
No 42
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.84 E-value=1.4e-20 Score=133.08 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=76.1
Q ss_pred ccceEEEEecCCCCCCceEEEEEEe--CCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-C----CccCceeeEEE
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLA--THVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-D----DKVFRKFSFKA 75 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~--~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~----~~~~~~~~F~i 75 (160)
+.|+|.... ...+.|++|||||+ ++.|+| |+++.+..+.|.|+|.+|.+..... . +...++++|.|
T Consensus 10 ~~G~L~K~g--~~~~~Wk~R~fvL~~~~~~L~y-----y~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i 82 (117)
T 1v5u_A 10 YEGILYKKG--AFMKPWKARWFVLDKTKHQLRY-----YDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDV 82 (117)
T ss_dssp EEEEEEECC--CSSSCCEEEEEEEETTTTEEEE-----ESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEE
T ss_pred EEEEEEecC--CCCCCceeeEEEEECCCCEEEE-----eecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEE
Confidence 567776543 34689999999999 889999 9999989999999999987544221 1 11356689999
Q ss_pred eeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 76 EHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 76 ~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.++ .++|+|+|+|++|+++||.+|+.|+
T Consensus 83 ~~~-~r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 83 KTT-RRVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp EES-SCEEEEECSSHHHHHHHHHHHHTTC
T ss_pred ECC-CceEEEECCCHHHHHHHHHHHHHHh
Confidence 875 5899999999999999999999986
No 43
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.84 E-value=4.1e-20 Score=131.00 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=75.7
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCce
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
+.|+|.... ....+.||+|||||+++.|+| |+++.+..+.|.|+|.++. |...+ +++|.|.++ .+
T Consensus 10 ~~G~L~K~~-~~~~~~WkkR~fvL~~~~L~y-----y~~~~~~~~~g~i~l~~~~~v~~~~-------~~~F~i~~~-~r 75 (115)
T 2cod_A 10 KSGWLDKLS-PQGKRMFQKRWVKFDGLSISY-----YNNEKEMYSKGIIPLSAISTVRVQG-------DNKFEVVTT-QR 75 (115)
T ss_dssp EEEEEEECC-SSSSSCCEEEEEEECSSEEEE-----EESSCCSSCCCEEETTTEEEEEEET-------TTEEEEEES-SC
T ss_pred EEEEEEEcC-CCCCCCCceEEEEEECCEEEE-----EcCCCCcccCCEEECCcceEEEeCC-------CCEEEEEeC-Cc
Confidence 567766332 125688999999999999999 9999988999999999975 44332 579999865 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 82 TYYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
+|+|+|+|++|+.+||.+|+.|+..+.
T Consensus 76 ~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 76 TFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999985554
No 44
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.83 E-value=6.8e-21 Score=137.18 Aligned_cols=96 Identities=19% Similarity=0.195 Sum_probs=78.0
Q ss_pred CccceEEEEec------CCCCCCceEEEEEEeCCeEEEcccCCCCCCccCcc--------ceEEEcCCeEEEecCCCCcc
Q psy407 2 DHVCFLIILND------NMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKL--------LGSILLPSYKISPCSSDDKV 67 (160)
Q Consensus 2 ~~~~~~~~~~~------~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~--------~g~I~L~~~~V~~~~~~~~~ 67 (160)
++.|+|..=.. +.+.+.|++|||||+++.|+| |+++.+..+ .+.|+|.+|.|..+.+. .
T Consensus 9 ~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~-----yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~--~ 81 (122)
T 1dro_A 9 GHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISF-----YKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDY--T 81 (122)
T ss_dssp SEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBE-----ESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSS--S
T ss_pred EEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEE-----EeCCcccccCCCcccCCCceEECCCCEEEeCCCC--C
Confidence 45667654221 225788999999999999999 999887544 37899999988766432 4
Q ss_pred CceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 68 FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 68 ~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+++|+|+|.+.+.++|+|+|+|++||++||.+|+.|+
T Consensus 82 kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i 118 (122)
T 1dro_A 82 KKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS 118 (122)
T ss_dssp SSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 7899999997777899999999999999999999986
No 45
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.83 E-value=4.1e-20 Score=134.21 Aligned_cols=85 Identities=15% Similarity=0.167 Sum_probs=73.8
Q ss_pred CCCCCceEEEEEEeCCeEEEcccCCCCCCccC------------ccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 14 MASTLCHNVYLLLATHVMVFSPEISGLGFEEE------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 14 ~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~------------~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
.+.+.|++|||||+++.|+| ||++.+. .+.+.|+|.+|.|..+.. +..+++|+|+|.+++.+
T Consensus 26 ~~~r~W~~~w~VL~~~~L~~-----yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~-d~~krk~vF~l~t~~~~ 99 (124)
T 3pp2_A 26 LRKKHWSASWTVLEGGVLTF-----FKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPK-DKSSRKNVLELRSRDGS 99 (124)
T ss_dssp CSSCCCEEEEEEEETTEEEE-----ESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCG-GGCSSSSEEEEECTTSC
T ss_pred CCCCCceEEEEEEECCEEEE-----EecCccccccCccCcccccCCcceEEcCCCEEEeccc-ccCCCceEEEEECCCCC
Confidence 34568999999999999999 9998764 578999999999988741 22478999999987778
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhH
Q psy407 82 TYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+|+|+|+|++||++||.+|+.|+
T Consensus 100 ~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 100 EYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
No 46
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.83 E-value=2.4e-20 Score=147.25 Aligned_cols=98 Identities=12% Similarity=0.203 Sum_probs=82.2
Q ss_pred ccceEEEEecCC--CCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-CCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNM--ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~--~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~~~~~~~~~F~i~~~~ 79 (160)
+.|+|.....+. ..+.||+|||||+++.|+| |+++.+..+.|.|+|.+|.+..... ....+++|+|.|.+++
T Consensus 108 k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Y-----yk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~ 182 (211)
T 1u5e_A 108 KAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYY-----YGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPD 182 (211)
T ss_dssp EEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEE-----ESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSS
T ss_pred EEEEEEEECCCCCcCCCCcEeEEEEEECCEEEE-----EcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCC
Confidence 567777766543 3679999999999999999 9999999999999999998876432 1112568999999877
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.|+|+|+|+|++++.+||.+|+.|+.
T Consensus 183 ~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 183 KRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999874
No 47
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.83 E-value=1.5e-19 Score=137.20 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=75.5
Q ss_pred ceEEEEec---CCCCCCceEEEEEEeCCeEEEcccCCCCCCcc-CccceEEEcCCeE-EEecCCCC---ccCceeeEEEe
Q psy407 5 CFLIILND---NMASTLCHNVYLLLATHVMVFSPEISGLGFEE-EKLLGSILLPSYK-ISPCSSDD---KVFRKFSFKAE 76 (160)
Q Consensus 5 ~~~~~~~~---~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e-~~~~g~I~L~~~~-V~~~~~~~---~~~~~~~F~i~ 76 (160)
|+|+.-.. +.+.+.||+|||||+++.|+| |+++.+ ..+.|.|+|.++. |..+...+ ...++++|.|.
T Consensus 19 G~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Y-----yk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~ 93 (164)
T 2lul_A 19 EILIKRSQQKKKTSPLNYKERLFVLTKSMLTY-----YEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVV 93 (164)
T ss_dssp EEEEEECCCCSSSCCCCEEEEEEEEESSEEEE-----ECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEE
T ss_pred EEEEEecCCCCCCCCCCceeEEEEEECCEEEE-----EeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEe
Confidence 55554322 234567999999999999999 998765 5689999998865 55544322 23568899999
Q ss_pred eCCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 77 HANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 77 ~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+++ |+|||+|+|++|+++||.+|+.++...
T Consensus 94 t~~-rt~~l~A~s~~e~~~Wi~aL~~~i~~n 123 (164)
T 2lul_A 94 HDA-NTLYIFAPSPQSRDLWVKKLKEEIKNN 123 (164)
T ss_dssp CSS-CEEEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred cCC-cEEEEECCCHHHHHHHHHHHHHHHHHC
Confidence 864 899999999999999999999997543
No 48
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.83 E-value=2.9e-20 Score=140.35 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=67.9
Q ss_pred CccceEEEE--------ecCCCCCCceEEEEEEeCCeEEEcccCCCCCCcc--CccceEEEcCC--eEEEecCCCCccCc
Q psy407 2 DHVCFLIIL--------NDNMASTLCHNVYLLLATHVMVFSPEISGLGFEE--EKLLGSILLPS--YKISPCSSDDKVFR 69 (160)
Q Consensus 2 ~~~~~~~~~--------~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e--~~~~g~I~L~~--~~V~~~~~~~~~~~ 69 (160)
++.|+|..- +.....+.|++|||||+++.|+| |+++.+ ..+.|.|+|.. |.+...... .++
T Consensus 4 ~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~y-----yk~~~~~~~~~~g~i~l~~~~~~~~~~~~~--~~~ 76 (168)
T 2j59_M 4 AKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYL-----YKDKREQTTPSEEEQPISVNACLIDISYSE--TKR 76 (168)
T ss_dssp CEEEEEEEEECC------------CCEEEEEEEETTEEEE-----ESCTTCC--------CEECSSCEEEECSSS--CSC
T ss_pred cEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEE-----EECCcccccccCCceEecccceEEEecccc--CCC
Confidence 356777643 22246788999999999999999 999865 67899988866 666554332 367
Q ss_pred eeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 70 KFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 70 ~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|+|+|.+++ ++|+|+|+|++||.+||.+|+.|+.
T Consensus 77 ~~~F~I~t~~-r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 77 KNVFRLTTSD-CECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp SSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8999999876 8999999999999999999999874
No 49
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.8e-19 Score=128.09 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=75.2
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
++.|+|...... ..+.|++|||||+++.|+| |+++.+ .+.+.|.|.+|.|.+.. .++++|.|.++ .+
T Consensus 11 ~~~G~L~K~~~~-~~k~WkkR~fvL~~~~L~y-----yk~~~~-~~~~~i~l~~~~v~~~~-----~~~~~F~I~~~-~r 77 (114)
T 2da0_A 11 EKKGYLLKKSDG-IRKVWQRRKCSVKNGILTI-----SHATSN-RQPAKLNLLTCQVKPNA-----EDKKSFDLISH-NR 77 (114)
T ss_dssp CEEEEEEEECSS-SCCCEEEEEEEEETTEEEE-----CCSSCC-SCCEEEETTTSEEEECS-----SSSSCEEEEET-TE
T ss_pred cEEEEEEEeCCC-CCCCceeEEEEEeCCEEEE-----EcCCCC-CCCCEEEeeeeEEEECC-----CCCCEEEEEcC-Cc
Confidence 467777765532 2389999999999999999 998655 57788999888877432 35689999976 58
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 82 TYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
+|+|+|+|++|+.+||.+|+.|+..
T Consensus 78 ~~~l~a~s~~e~~~Wi~al~~~~~~ 102 (114)
T 2da0_A 78 TYHFQAEDEQDYVAWISVLTNSKEE 102 (114)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998754
No 50
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.82 E-value=7.4e-21 Score=136.69 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=76.4
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeC-CeEEEcccCCCCCCccCccceEEEcCCeEEEecC--CCCccCceeeEEEee--
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLAT-HVMVFSPEISGLGFEEEKLLGSILLPSYKISPCS--SDDKVFRKFSFKAEH-- 77 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~-~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~--~~~~~~~~~~F~i~~-- 77 (160)
+.|+|.. .....+.||+|||||++ +.|+| |+++.+..+.|.|+|.++.|..+. ..+ .+++++|+|.+
T Consensus 10 ~~G~L~K--~g~~~k~WkkRwfvL~~~~~L~y-----y~~~~~~~~~g~i~L~~~~~~~~~~~~~~-~~~~~~F~I~~~~ 81 (125)
T 1unq_A 10 KEGWLHK--RGEYIKTWRPRYFLLKNDGTFIG-----YKERPQDVDQREAPLNNFSVAQCQLMKTE-RPRPNTFIIRCLQ 81 (125)
T ss_dssp EEEEEEE--ECSSSCCEEEEEEEEETTSEEEE-----ESSCCCSHHHHTSCSEEEECTTCEEEEEC-SSSTTEEEEEEEE
T ss_pred EEeeEEe--ccCCccCccCcEEEEecCCEEEE-----EeCCCCCCCCceeEccceeEEeeeecccc-cCCCCEEEEEecC
Confidence 6778764 34467899999999995 69999 999988888999998877643221 011 26789999986
Q ss_pred -CCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 78 -ANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 78 -~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
...++|+|+|+|++|+.+||.+|+.|+...
T Consensus 82 ~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~ 112 (125)
T 1unq_A 82 WTTVIERTFHVETPEEREEWTTAIQTVADGL 112 (125)
T ss_dssp TTEEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 356899999999999999999999997543
No 51
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=133.47 Aligned_cols=98 Identities=12% Similarity=0.089 Sum_probs=77.7
Q ss_pred CccceEEE---EecCC--CCCCceEEEEEEeCCeEEEcccCCCCCCc---------cCccceEEEcCCeEEEecCCCCcc
Q psy407 2 DHVCFLII---LNDNM--ASTLCHNVYLLLATHVMVFSPEISGLGFE---------EEKLLGSILLPSYKISPCSSDDKV 67 (160)
Q Consensus 2 ~~~~~~~~---~~~~~--~~k~WkkRWFVL~~~~L~y~~~~yYk~~~---------e~~~~g~I~L~~~~V~~~~~~~~~ 67 (160)
+..|||-. +++.. ..+.|+||||||.+++|+| |+... +.+|.|.|+|.|+.|...+. .
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~y-----f~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~---~ 73 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLY-----YGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDD---P 73 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEE-----EEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCC---T
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEE-----EcccccccccccccccCCCceEEeCCCEEEecCC---C
Confidence 34566543 33322 2577999999999999999 88553 45799999999999984433 3
Q ss_pred CceeeEEEeeC-CceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 68 FRKFSFKAEHA-NMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 68 ~~~~~F~i~~~-~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+++++|+|.++ ....|.|+|+|++++.+||+||+.|+...
T Consensus 74 ~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~ 114 (126)
T 2dtc_A 74 EHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSS 114 (126)
T ss_dssp TSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSC
T ss_pred CCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcC
Confidence 68999999976 56789999999999999999999998533
No 52
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.82 E-value=5.8e-20 Score=149.61 Aligned_cols=85 Identities=11% Similarity=0.192 Sum_probs=73.3
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCC------ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCC
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGF------EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADT 89 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~------~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aes 89 (160)
.+.|++|||||++++|+| |+++ .+..|.|.|+|.+|.|..+.+. .+++|+|+|.+++.++|+|+|+|
T Consensus 36 ~K~WkrRWfVL~~~~L~y-----yK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~--~kk~~~F~I~t~~~r~y~f~A~s 108 (263)
T 3a8p_A 36 RRKWKQYWVTLKGCTLLF-----YETYGKNSTEQNSAPRCALFAEDSIVQSVPEH--PKKEHVFCLSNSCGDVYLFQATS 108 (263)
T ss_dssp TCCCEEEEEEEETTEEEE-----ESSCCC------CCCSEEEECTTCEEEECTTC--SSCSSEEEEECTTSCEEEEECSS
T ss_pred CCCceEEEEEEcCCEEEE-----EecCcccccccccCccceEEcCCcEEEECCcC--CCCCCEEEEEcCCCcEEEEEcCC
Confidence 789999999999999999 9984 4578999999999998876442 36799999998677899999999
Q ss_pred HHHHHHHHHHHHHhHhhc
Q psy407 90 RESMIQWMNALSLASILQ 107 (160)
Q Consensus 90 e~e~~~Wi~aL~~a~~~~ 107 (160)
++||++||++|+.|+...
T Consensus 109 ~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 109 QTDLENWVTAIHSACASL 126 (263)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999987543
No 53
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=133.37 Aligned_cols=98 Identities=15% Similarity=0.219 Sum_probs=68.0
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeC-CeEEEcccCCCCCCcc---CccceEEEcCCeEEEe--------------cCC-
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLAT-HVMVFSPEISGLGFEE---EKLLGSILLPSYKISP--------------CSS- 63 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~-~~L~y~~~~yYk~~~e---~~~~g~I~L~~~~V~~--------------~~~- 63 (160)
+.|+|..-..+...+.||+|||||++ +.|+| |++..+ ....+.|+|..+++.. ++.
T Consensus 6 k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y-----~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~ 80 (128)
T 2rlo_A 6 KQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLY-----HPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASG 80 (128)
T ss_dssp EEEEEEEECSCSTTCCEEEEEEEEETTTEEEE-----ESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCC
T ss_pred eEEEEEEecCCCccCCccEEEEEEeCCCEEEE-----ecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccc
Confidence 45777764333457899999999996 68887 876332 1122345555544432 110
Q ss_pred --CCccCceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 64 --DDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 64 --~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.....++|+|.|.+++.++|+|+|+|++|+++||.||+.|+.
T Consensus 81 ~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 81 SAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp CCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 000156899999988768999999999999999999999864
No 54
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.80 E-value=3.6e-19 Score=149.76 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=80.5
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC--
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-- 79 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-- 79 (160)
.+.|+|... ....+.||+|||||++++|+| |+++.+..|.|.|+|.+|.|..+.. .+++++|+|.+++
T Consensus 214 ~k~G~L~K~--g~~~k~WkkRwFVL~~~~L~Y-----yk~~~~~~p~G~I~L~~~~v~~~~~---~~~~~~F~I~~~~~~ 283 (347)
T 2r09_A 214 DREGWLLKL--GGRVKTWKRRWFILTDNCLYY-----FEYTTDKEPRGIIPLENLSIREVED---PRKPNCFELYNPSHK 283 (347)
T ss_dssp CEEEEEEEE--CSSSCCEEEEEEEEETTEEEE-----ESSTTCSSCSEEEECTTCEEEEECC---SSCSSEEEEECSSST
T ss_pred ccCCeeEec--CCCcccceeEEEEEcCCEEEE-----EcCCCccCCcEEEEcCCeEEEEccC---CCCCCEEEEEeCCcc
Confidence 356777543 344789999999999999999 9999999999999999999887754 3788999998763
Q ss_pred -------------------ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 -------------------MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 -------------------~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.|+|+|+|+|++|+.+||.+|+.|+.
T Consensus 284 ~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 284 GQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp TCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999874
No 55
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.77 E-value=8.7e-19 Score=139.40 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=76.2
Q ss_pred ccceEEEEecCC---CCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC
Q psy407 3 HVCFLIILNDNM---ASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN 79 (160)
Q Consensus 3 ~~~~~~~~~~~~---~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~ 79 (160)
+.|+|.....+. +.+.|++|||||+++.|+| |+++.+..++|.|+|.+|.+..... +++++|.|.++
T Consensus 60 k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Y-----yk~~~~~~~~g~I~L~~~~~v~~~~----~k~~~F~I~t~- 129 (228)
T 3tfm_A 60 KQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMY-----FENDSEEKLKGTVEVRSAKEIIDNT----NKENGIDIIMA- 129 (228)
T ss_dssp EEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEE-----ESSTTCCSEEEEEEGGGCSEEEEET----TTTSEEEEECS-
T ss_pred eEEEEEEECCCcCCcccCCceEEEEEEeCCEEEE-----EeCCCCcceeEEEEcCCCEEeccCC----CCCcEEEEEcC-
Confidence 345665443322 2388999999999999999 9999988999999999987643322 56889999875
Q ss_pred ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 ~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.++|+|+|+|++|+.+||.+|+.++.
T Consensus 130 ~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 130 DRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999975
No 56
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.77 E-value=1.2e-18 Score=147.59 Aligned_cols=95 Identities=7% Similarity=0.114 Sum_probs=75.4
Q ss_pred CccceEEEEecCCCC-CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc
Q psy407 2 DHVCFLIILNDNMAS-TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM 80 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~-k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~ 80 (160)
.+.|+|..-..++.. +.|+||||||++++|+| |++ .+..+.|.|+|.+|.|..+... +++|+|+|.+++.
T Consensus 279 ~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y-----~k~-~~~~~~~~i~l~~~~v~~~~~~---~r~~~F~i~t~~~ 349 (385)
T 2q13_A 279 RKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMS-----QAR-GDVAGGLAMDIDNCSVMAVDCE---DRRYCFQITSFDG 349 (385)
T ss_dssp CCEEEEEEC--------CCEEEEEEEETTEEEE-----ECS-SCSSCEEEEECTTCEEEEECCT---TCSSEEEEECTTS
T ss_pred cEEEEEEEecCCCCCcCCceeEEEEEECCEEEE-----ecC-CCcCCCceEEccceEEEecccc---CCCceEEEEeCCC
Confidence 345777654332212 36999999999999999 998 4566889999999999887543 7889999998754
Q ss_pred -eEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 81 -RTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 81 -r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
++|+|+|+|++||.+||.||+.|+.
T Consensus 350 ~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 350 KKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp CBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999864
No 57
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.77 E-value=1.1e-18 Score=142.14 Aligned_cols=91 Identities=18% Similarity=0.111 Sum_probs=74.2
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCC-------eEEEcccCCCCCCcc-----CccceEEEcCCeE-EEecCCCCccCc
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATH-------VMVFSPEISGLGFEE-----EKLLGSILLPSYK-ISPCSSDDKVFR 69 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~-------~L~y~~~~yYk~~~e-----~~~~g~I~L~~~~-V~~~~~~~~~~~ 69 (160)
+.|+|... |.||||||||++. .|+| |+++.+ .+++|.|+|.+|. |..... .++
T Consensus 12 k~G~L~K~------K~WkkRwFVL~~~~~~G~~~~L~Y-----Yk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~---~~~ 77 (264)
T 1qqg_A 12 KVGYLRKP------KSMHKRFFVLRAASEAGGPARLEY-----YENEKKWRHKSSAPKRSIPLESCFNINKRAD---SKN 77 (264)
T ss_dssp EEEEEECT------TTCCEEEEEEECCBTTTBSSEEEE-----ESSHHHHHTTCSCCSEEEEGGGEEEEEEECC---SSC
T ss_pred EEEEEEEC------CCCEeEEEEEECCCCCCCCCEEEE-----ECCCccccccccCcceEEEeeceEEEEeccC---CCC
Confidence 45666432 8999999999988 9999 999987 6899999999986 555433 367
Q ss_pred eeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHhhcc
Q psy407 70 KFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 70 ~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
+|+|.|.++ .|+|+|+|+|++|+++||.+|+.++....
T Consensus 78 ~~~F~I~t~-~rty~l~A~se~e~~~Wi~aL~~~~~~~k 115 (264)
T 1qqg_A 78 KHLVALYTR-DEHFAIAADSEAEQDSWYQALLQLHNRAK 115 (264)
T ss_dssp SSEEEEEES-SCEEEEECSSHHHHHHHHHHHHHHC----
T ss_pred CcEEEEEEC-CEEEEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence 899999987 58999999999999999999999875543
No 58
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.76 E-value=1.7e-18 Score=147.65 Aligned_cols=93 Identities=14% Similarity=0.140 Sum_probs=78.1
Q ss_pred cceEEEEecCCC-CCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC-ce
Q psy407 4 VCFLIILNDNMA-STLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-MR 81 (160)
Q Consensus 4 ~~~~~~~~~~~~-~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-~r 81 (160)
.|+|.+-.++++ .+.|+||||||++++|+| |+... ..+.+.|+|.+|+|.+++.. .|+|||+|.+++ .+
T Consensus 304 ~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y-----~~~~~-~~~~~~~~l~~~~v~~~~~~---~r~~cF~i~~~~~~~ 374 (407)
T 4h8s_A 304 AGYLNLRNKTGLVTTTWERLYFFTQGGNLMC-----QPRGA-VAGGLIQDLDNCSVMAVDCE---DRRYCFQITTPNGKS 374 (407)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECSSCEEC-----CCTTC-SSCCCCBCSSCCEEEEECCT---TCSSEEEEECTTSSC
T ss_pred eceeeeeccCCCCCCCceEEEEEEECCEEEE-----EeCCC-CCCCeEEECCceEEEECCCC---CCCceEEEEecCCCc
Confidence 477766655544 467999999999999998 88654 45889999999999887654 678999999875 47
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 82 TYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|+|+|+|++||.+||.||+.|+.
T Consensus 375 ~~~l~A~s~~e~~~Wi~ai~~a~~ 398 (407)
T 4h8s_A 375 GIILQAESRKENEEWICAINNISR 398 (407)
T ss_dssp CEEEECSSSHHHHHHHHHHHHHHS
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874
No 59
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.75 E-value=1e-17 Score=142.82 Aligned_cols=95 Identities=11% Similarity=0.137 Sum_probs=75.3
Q ss_pred ccceEEEEecCCCC-CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC----eEEEecCCCCccC--ceeeEEE
Q psy407 3 HVCFLIILNDNMAS-TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS----YKISPCSSDDKVF--RKFSFKA 75 (160)
Q Consensus 3 ~~~~~~~~~~~~~~-k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~----~~V~~~~~~~~~~--~~~~F~i 75 (160)
+.|+|... .... +.||+|||||+++.|+| |+++.+..++|.|+|.. +.|....+.+..+ ++|+|.|
T Consensus 271 k~G~L~K~--g~~~~k~WKkRwFVL~~~~L~Y-----Yk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I 343 (386)
T 3lju_X 271 KEGYMEKT--GPKQTEGFRKRWFTMDDRRLMY-----FKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITI 343 (386)
T ss_dssp EEEEEEEC--CTTSCSCCEEEEEEEETTEEEE-----ESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEE
T ss_pred eeeeEEEE--CCCCCCCCcccEEEEECCEEEE-----EecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEE
Confidence 56777643 3334 78999999999999999 99999999999999965 3454432222112 2699999
Q ss_pred eeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 76 EHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 76 ~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.+++ |+|+|+|+|++|+++||.||+.++.
T Consensus 344 ~t~~-rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 344 VTPD-RKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp ECSS-CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9875 8999999999999999999999864
No 60
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.75 E-value=1.1e-18 Score=141.18 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=76.9
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcC---CeEEEecCCC---CccCceeeEEE
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLP---SYKISPCSSD---DKVFRKFSFKA 75 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~---~~~V~~~~~~---~~~~~~~~F~i 75 (160)
++.|+|..- ..+.+.|++|||||++++|+| |+++.+..+.|.|.|. ++.|...... ....++|+|.|
T Consensus 169 ~~~G~L~k~--~~~~k~WkkR~fvL~~~~L~y-----yk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 169 ELEGALYLK--EDGKKSWKRRYFLLRASGIYY-----VPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CCEEEEEEE--CTTSSCEEEEEEEECSSEEEE-----CCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred ceEEEEEEe--CCCCCCceEEEEEEeCCEEEE-----EecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEE
Confidence 577888754 445689999999999999999 9999998888887764 4555443221 01246899999
Q ss_pred eeCC-----ceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 76 EHAN-----MRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 76 ~~~~-----~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.+++ .++|||+|+|++++.+||+||+.|..+.
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~g~ 278 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKYGK 278 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHHTH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhcch
Confidence 8753 3679999999999999999999997543
No 61
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.73 E-value=4.8e-17 Score=122.39 Aligned_cols=92 Identities=20% Similarity=0.300 Sum_probs=73.8
Q ss_pred eEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCC---------CCcc-------------------------Cc-----
Q psy407 6 FLIILNDNMASTLCHNVYLLLATHVMVFSPEISGL---------GFEE-------------------------EK----- 46 (160)
Q Consensus 6 ~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk---------~~~e-------------------------~~----- 46 (160)
++|+++++ -.+.|++|||||.+..|+| ++ ++++ ..
T Consensus 5 G~L~~~~~-~~~~w~~~~fvL~~~~L~y-----~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 5 GILYLEDP-VNHEWYPHYFVLTSSKIYY-----SEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp EEEEEEET-TTTEEEEEEEEEETTEEEE-----CCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSS
T ss_pred eEEEeecC-CCCCceEeEEEEECCEEEE-----EeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhc
Confidence 56778875 4579999999999999999 55 1100 11
Q ss_pred ----------cceEEEcCCeEEEecCCCCccCceeeEEEeeCC--ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 47 ----------LLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN--MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 47 ----------~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~--~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..|.|+|.||.|....... .+++|+|+|.+++ .++|+|+|+|.++|.+||.+|+.|+
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~~~~-~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRPEGK-NNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEETTCS-SSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccccccccccccceEecCccEEEeccCCC-CCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 1799999999998875432 3689999998763 4689999999999999999999986
No 62
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.69 E-value=4.1e-17 Score=139.09 Aligned_cols=93 Identities=11% Similarity=0.155 Sum_probs=71.7
Q ss_pred ccceEEEEecCCCCCCceEEEEEE--eCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEe---e
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLL--ATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAE---H 77 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL--~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~---~ 77 (160)
..|+|.. +....+.|||||||| ++++|+| |+++.+.+|+|.|.|.++++...+. ..+++++|.|. .
T Consensus 148 keG~L~K--rG~~~k~WkrRwFVL~~~~~~L~Y-----y~~~~~~~p~g~I~L~~~~~~~~~~--~~~~~~~f~I~~~~~ 218 (386)
T 3lju_X 148 REGFLWK--RGRDNGQFLSRKFVLTEREGALKY-----FNRNDAKEPKAVMKIEHLNATFQPA--KIGHPHGLQVTYLKD 218 (386)
T ss_dssp EEEEEEE--ECSSSCCEEEEEEEEETTTTEEEE-----EC-----CCSEEEEGGGEEEEECHH--HHTSTTCEEEEEEET
T ss_pred cccceee--eccccCCceEEEEEEEcCCCEEEE-----ECCCCccCcccEEEeeccEEEEccc--ccCCCceEEEEEecC
Confidence 3566654 344468999999999 8999999 9999999999999999987655321 23678899987 2
Q ss_pred CCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 78 ANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 78 ~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
...|+|+|+|+|.+||.+||++|+.|.
T Consensus 219 ~~~R~y~l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 219 NSTRNIFIYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp TEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHhhhhcc
Confidence 456999999999999999999999885
No 63
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.68 E-value=5.6e-17 Score=133.19 Aligned_cols=85 Identities=9% Similarity=0.156 Sum_probs=73.3
Q ss_pred CCCCceEEEEEEeCCeEEEcccCCCCCCcc------CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcC
Q psy407 15 ASTLCHNVYLLLATHVMVFSPEISGLGFEE------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAAD 88 (160)
Q Consensus 15 ~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Ae 88 (160)
+.+.|++|||||+++.|+| |+++.. ..+.+.|.|.+|.|..+.+. .+++|+|+|.+++.++|+|+|+
T Consensus 35 ~~r~Wkk~w~VLkg~~L~f-----YKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~--~kKk~vF~L~t~~g~~yLFQA~ 107 (279)
T 3a8n_A 35 TRRKWKHYWVSLKGCTLFF-----YETDGRSGIDHNSVPKHAVWVENSIVQAVPEH--PKKDFVFCLSNSLGDAFLFQTT 107 (279)
T ss_dssp CCCCCEEEEEEEETTEECC-----BCCC--------CCCSSCCBCCSCEECCCTTS--SSSCSCCCEEETTTEEEECCCS
T ss_pred cCCCCeEEEEEEeCCEEEE-----EecccccccccccCCCceEeccCcEEEecccc--CCCCcEEEEEcCCCCEEEEeCC
Confidence 5689999999999999999 998763 35788999999999865432 3788999999888899999999
Q ss_pred CHHHHHHHHHHHHHhHhh
Q psy407 89 TRESMIQWMNALSLASIL 106 (160)
Q Consensus 89 se~e~~~Wi~aL~~a~~~ 106 (160)
|++||++||.+|+.|+..
T Consensus 108 s~eEm~~WI~aI~~a~~~ 125 (279)
T 3a8n_A 108 SQTELENWITAIHSACAA 125 (279)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999998863
No 64
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.68 E-value=2.8e-16 Score=113.57 Aligned_cols=95 Identities=13% Similarity=0.165 Sum_probs=71.8
Q ss_pred ceEEEEecCCCCC-CceEEEEEEeCCeEEEcccCCCCCCccC---ccceEEEcCCe-EEEecCCCCc-----cCceeeEE
Q psy407 5 CFLIILNDNMAST-LCHNVYLLLATHVMVFSPEISGLGFEEE---KLLGSILLPSY-KISPCSSDDK-----VFRKFSFK 74 (160)
Q Consensus 5 ~~~~~~~~~~~~k-~WkkRWFVL~~~~L~y~~~~yYk~~~e~---~~~g~I~L~~~-~V~~~~~~~~-----~~~~~~F~ 74 (160)
|.|..=+..+..+ .|++|||||.+..|+| |+++.+. .|.|.|+|..+ .|+.+...|. ...++.|+
T Consensus 5 Gwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~-----y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~ 79 (117)
T 2rov_A 5 GWLSLPVRNNTKKFGWVKKYVIVSSKKILF-----YDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQ 79 (117)
T ss_dssp EEEECCCCSSSSCCCCCEEEEEEETTEEEE-----ESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEE
T ss_pred EEEEeecCCCccCCCcEEEEEEEECCEEEE-----EECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEE
Confidence 4443323334445 7999999999999999 9987654 78999999664 5666644321 13467899
Q ss_pred EeeC-----CceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 75 AEHA-----NMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 75 i~~~-----~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
|... ..+++||.|+|++|+++||.+|+.++
T Consensus 80 I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 80 ILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp EEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9763 35899999999999999999999875
No 65
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.57 E-value=8e-15 Score=120.50 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=70.1
Q ss_pred CccceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCc---cceEEEcCCeEEEecCCCC---ccCceeeEEE
Q psy407 2 DHVCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEK---LLGSILLPSYKISPCSSDD---KVFRKFSFKA 75 (160)
Q Consensus 2 ~~~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~---~~g~I~L~~~~V~~~~~~~---~~~~~~~F~i 75 (160)
|+.|||..- ..+.+.|+||||||++++||| |++.+... +.+.+.|.+|.|-.+.... ..-.+|+|.|
T Consensus 159 e~~G~L~~k--~~~~k~WkkRyfvLr~sgLyy-----~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~i 231 (281)
T 4gmv_A 159 EIEGVLWLK--DDGKKSWKKRYFLLRASGIYY-----VPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVL 231 (281)
T ss_dssp CCEEEEEEE--CTTSSCEEEEEEEECSSCEEE-----C---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEE
T ss_pred ccEEEEEEE--CCCCCCCeEEEEEEeCCEEEE-----EeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEE
Confidence 567776332 234589999999999999999 77654433 4567799999887753210 1135789999
Q ss_pred eeCC-----ceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 76 EHAN-----MRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 76 ~~~~-----~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.++. ...+||+|+|++++..||+||+.|..+.
T Consensus 232 k~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g~ 268 (281)
T 4gmv_A 232 KHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGK 268 (281)
T ss_dssp ECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHTH
T ss_pred ecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhCc
Confidence 8643 3579999999999999999999997553
No 66
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.56 E-value=2.1e-14 Score=116.59 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=71.8
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceE---EEcCCeEEEecCCCC---ccCceeeEEEee
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGS---ILLPSYKISPCSSDD---KVFRKFSFKAEH 77 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~---I~L~~~~V~~~~~~~---~~~~~~~F~i~~ 77 (160)
.|+|. ++ ..+.|.||||||||++++||| |++.+...+++. +.|.++.|-.+.... ..-.+|+|.|.+
T Consensus 135 ~G~L~-~k-e~~~K~WkkRyfvLr~sgLy~-----~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~ 207 (256)
T 3hk0_A 135 QGFLH-VK-ELGKKSWKKLYVCLRRSGLYC-----STKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKP 207 (256)
T ss_dssp EEEEE-EE-CTTSSCEEEEEEEEETTEEEE-----ESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEE
T ss_pred eeEEE-Ee-cCCCCcceEEEEEEeCCEEEE-----EecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEc
Confidence 45553 22 234589999999999999999 877665556554 799999886654311 011368999986
Q ss_pred CCc-----eEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 78 ANM-----RTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 78 ~~~-----r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
... ..+||+|++++++.+||+||+.|..+.
T Consensus 208 ~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g~ 242 (256)
T 3hk0_A 208 NKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYGM 242 (256)
T ss_dssp TTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHTH
T ss_pred ccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhhH
Confidence 532 369999999999999999999997654
No 67
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=7.3e-14 Score=101.95 Aligned_cols=98 Identities=17% Similarity=0.183 Sum_probs=74.3
Q ss_pred ccceEEEEecCCCCCCceEEEEEEeCC------eEEEcccCCCCCCcc----CccceEEEcCCe-EEEecCCC-CccCce
Q psy407 3 HVCFLIILNDNMASTLCHNVYLLLATH------VMVFSPEISGLGFEE----EKLLGSILLPSY-KISPCSSD-DKVFRK 70 (160)
Q Consensus 3 ~~~~~~~~~~~~~~k~WkkRWFVL~~~------~L~y~~~~yYk~~~e----~~~~g~I~L~~~-~V~~~~~~-~~~~~~ 70 (160)
+.|+|..=..-.-.|.||||||||... -|-| |.+++. ..++.+|.|.+| .|.+++.+ ...+..
T Consensus 14 k~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~-----yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~ 88 (127)
T 2d9w_A 14 KQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLEL-----QEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT 88 (127)
T ss_dssp EEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEE-----ECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred cceEEEecccchhhhhhheeEEEEecCCCCCceeeee-----eeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence 456666655523346799999999853 6777 777655 367899999998 48777654 333667
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 71 FSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 71 ~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
++|.|++++ ++|+|+|+++ |+.+||.+|...+-..
T Consensus 89 ~aF~l~T~e-r~~~laAe~~-E~~~Wi~~ic~~aF~~ 123 (127)
T 2d9w_A 89 SAFFLETKE-RLYLLAAPAA-ERGDWVQAICLLAFSG 123 (127)
T ss_dssp EEEEEEESS-CEEEEEECHH-HHHHHHHHHHHHHTSS
T ss_pred eEEEEEeCC-cEEEEEeCcH-HHHHHHHHHHHHhcCC
Confidence 899999875 8999999975 8999999999976443
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.38 E-value=6.6e-13 Score=112.91 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=66.7
Q ss_pred cceEEEEecCCCCCCceEEEEEEe-CCeEEEcccCCCCCCccCccceEEEcCCeEEEecCC-CCccCceeeEEEeeCCce
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLA-THVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSS-DDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~-~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~-~~~~~~~~~F~i~~~~~r 81 (160)
.|+|. |.....|.||+|||||+ +++|+| ||++.+..+.|.|+|.++++..+.. .....++++|.|...+.+
T Consensus 9 eG~L~--K~g~~~k~Wk~r~fvL~~~~~l~y-----yk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~ 81 (446)
T 4ejn_A 9 EGWLH--KRGEYIKTWRPRYFLLKNDGTFIG-----YKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWT 81 (446)
T ss_dssp EEEEE--EEETTTTEEEEEEEEEETTSBEEE-----ESSCC-------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETT
T ss_pred EeeEE--eeccccccccceEEEEeeCCEEEE-----EecCCCCCccCcccccCccccceeecCCCCCCCceeEEEcCCCc
Confidence 35554 44556789999999997 899999 9999999999999998865432110 001256789999876555
Q ss_pred EE---EEEcCCHHHHHHHHHHHHHhHhh
Q psy407 82 TY---YFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 82 ~~---~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+ .|.+++++++.+|+.||+.++..
T Consensus 82 ~~~~r~~~~~~~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 82 TVIERTFHVETPEEREEWTTAIQTVADG 109 (446)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred eeeeeEEecCCHHHHHHHHHHHHhhhhh
Confidence 55 79999999999999999998643
No 69
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.26 E-value=1.4e-11 Score=92.59 Aligned_cols=76 Identities=17% Similarity=0.233 Sum_probs=65.1
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC-eEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHHH
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS-YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 96 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~-~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~W 96 (160)
.|++|||+|++....| |-++.....+|.|+|.. |.|+..+.. .|.|.+++ |+|+|.+. ..+.++|
T Consensus 65 ~~kkR~liLT~~PrL~-----Yvdp~~~~~KGeIpls~~l~ve~k~~~-------~F~I~Tp~-RtY~~~d~-~~~AqeW 130 (151)
T 1w1g_A 65 FARRRQLLLTEGPHLY-----YVDPVNKVLKGEIPWSQELRPEAKNFK-------TFFVHTPN-RTYYLMDP-SGNAHKW 130 (151)
T ss_dssp EEEEEEEEEETTTEEE-----EEETTTTEEEEEECCCTTCEEEESSSS-------EEEEEETT-EEEEEECT-TSCHHHH
T ss_pred cceeEEEEEcCCceEE-----EEcCccccccceEecCCCeeEEEcCCC-------EEEEECCC-ceEEEEcC-ccCHHHH
Confidence 4999999999987777 88999999999999976 567666431 79998887 99999997 8999999
Q ss_pred HHHHHHhHhhc
Q psy407 97 MNALSLASILQ 107 (160)
Q Consensus 97 i~aL~~a~~~~ 107 (160)
++||..+....
T Consensus 131 v~aI~~~~~~~ 141 (151)
T 1w1g_A 131 CRKIQEVWRQR 141 (151)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999997554
No 70
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.97 E-value=5.5e-09 Score=76.01 Aligned_cols=91 Identities=15% Similarity=0.147 Sum_probs=71.4
Q ss_pred ecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCe-EEEecCCCC---ccCceeeEEEeeCCceEEEEE
Q psy407 11 NDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSY-KISPCSSDD---KVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 11 ~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~-~V~~~~~~~---~~~~~~~F~i~~~~~r~~~l~ 86 (160)
+-...-+.|||+|++|+..+|.+ |+++.+.++.-.|+|.+. .|+.+.... .....++|+|.+. ..+||+.
T Consensus 16 H~t~~d~~rKRHYWrLD~K~Itl-----f~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~-~~~yyVg 89 (125)
T 2coa_A 16 HYSNKDTLRKRHYWRLDCKCITL-----FQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTA-NATYFVG 89 (125)
T ss_dssp ECCSSSCCCEEEEEEECSSEEEE-----ESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECS-SCCCCEE
T ss_pred EEccCCccccceeeEecCCeEEE-----EecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeC-CeEEEEc
Confidence 44444567999999999999999 999999999999999884 577764321 1246799999985 5789998
Q ss_pred cC-----------CHHHHHHHHHHHHHhHhhc
Q psy407 87 AD-----------TRESMIQWMNALSLASILQ 107 (160)
Q Consensus 87 Ae-----------se~e~~~Wi~aL~~a~~~~ 107 (160)
++ -.+.+..|..||++|...-
T Consensus 90 ~~~~~~p~~~sg~g~~~a~~W~~aIrqALmPv 121 (125)
T 2coa_A 90 EMPGGTPGGPSGQGAEAARGWETAIRQALMSG 121 (125)
T ss_dssp CCSCCCSSSCCCCCSHHHHHHHHHHHHHGGGS
T ss_pred cCCCCCCCCcCccccHHHHHHHHHHHhhccCC
Confidence 73 1367999999999997553
No 71
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=2.3e-08 Score=73.00 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=73.1
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCe-EEEecCCCC---ccCceeeEEEeeCCc
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSY-KISPCSSDD---KVFRKFSFKAEHANM 80 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~-~V~~~~~~~---~~~~~~~F~i~~~~~ 80 (160)
|.++-..++. +.|||+|++|+..+|.+ |+++.+.++.-.|+|.+. .|+++.... .....+||+|.+. .
T Consensus 12 GWmVH~t~~d--~~rKRHYWrLD~K~Itl-----f~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~-~ 83 (129)
T 2d9z_A 12 GWMVHYTSRD--NLRKRHYWRLDSKCLTL-----FQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITD-T 83 (129)
T ss_dssp EEEEEEESSC--CCCEEEEEEEESSCEEE-----ESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECS-S
T ss_pred ceEEEEccCC--ccccceeeEecCCeEEE-----EecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEEC-C
Confidence 4444444444 56999999999999999 999999999999999885 566653221 1135699999975 5
Q ss_pred eEEEEEcCC---------------HHHHHHHHHHHHHhHhhcc
Q psy407 81 RTYYFAADT---------------RESMIQWMNALSLASILQN 108 (160)
Q Consensus 81 r~~~l~Aes---------------e~e~~~Wi~aL~~a~~~~~ 108 (160)
.+||..++. .+.++.|..||++|...-.
T Consensus 84 ~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP~~ 126 (129)
T 2d9z_A 84 MVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMSGP 126 (129)
T ss_dssp CEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccCCC
Confidence 788887743 6999999999999975543
No 72
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.77 E-value=1.8e-08 Score=73.91 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=66.6
Q ss_pred CCCCceEEEEEEeC------CeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEc
Q psy407 15 ASTLCHNVYLLLAT------HVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAA 87 (160)
Q Consensus 15 ~~k~WkkRWFVL~~------~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~A 87 (160)
+...|+|+|+||+. ..|-| |..++..+|+..|.+..+. |.....-+-..+.|.|.|...+.-.|+|.|
T Consensus 38 ~~~~W~k~RLvL~k~g~G~~y~LEf-----y~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea 112 (136)
T 1v5m_A 38 GTAQWQKCRLLLRRAVAGERFRLEF-----FVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILET 112 (136)
T ss_dssp CSCCCEEEEEEEEECSSSCCEEEEE-----ESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEEC
T ss_pred cccchhheeeEEEEccCCCceEEEE-----ecCCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEc
Confidence 55689999999983 35666 9999999999999998852 433222111246678988877666899999
Q ss_pred CCHHHHHHHHHHHHHhHh
Q psy407 88 DTRESMIQWMNALSLASI 105 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~~ 105 (160)
.++++|+.|++.|+.+..
T Consensus 113 ~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 113 IDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcC
Confidence 999999999999998753
No 73
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.76 E-value=1.9e-08 Score=74.05 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=66.0
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCC-C--ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLG-F--EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESM 93 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~-~--~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~ 93 (160)
+.=+.|+|+|-++.|.| .+. + ..-...|.|+|.+..|....+ ....+++|+|..+..+++.++|.|.+|+
T Consensus 42 ~~~~eR~l~LF~~~Ll~-----~s~~~~~~~f~~kgklPL~g~~V~~~ed--~~~~~~aFeI~g~~~~~i~v~~~s~eE~ 114 (132)
T 1v61_A 42 EEKEERYFLLFSSVLIM-----LSASPRMSGFMYQGKIPIAGMVVNRLDE--IEGSDCMFEITGSTVERIVVHCNNNQDF 114 (132)
T ss_dssp SCCCEEEEEECSSCEEE-----EECSSSSSCCEEEEEECTTTCBCSTTCS--SSSSCCCEEEECSSSCEEEECCCCSHHH
T ss_pred CcceEEEEEEcCCeEEE-----EEecCCCceEEEEEEEecceeEEEeccc--cccCccEEEEecCCCceEEEEeCCHHHH
Confidence 44578999999888776 442 2 234678999999988776543 2367899999976658899999999999
Q ss_pred HHHHHHHHHhHhhc
Q psy407 94 IQWMNALSLASILQ 107 (160)
Q Consensus 94 ~~Wi~aL~~a~~~~ 107 (160)
++||.+|+.++...
T Consensus 115 ~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 115 QEWMEQLNRLTKSG 128 (132)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999987543
No 74
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.56 E-value=8.5e-07 Score=74.94 Aligned_cols=121 Identities=18% Similarity=0.128 Sum_probs=85.2
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCc-cCccceEEEcCCeEEEecCCCC--ccCceeeEEEeeC-CceEEEEEcCCHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFE-EEKLLGSILLPSYKISPCSSDD--KVFRKFSFKAEHA-NMRTYYFAADTRES 92 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~-e~~~~g~I~L~~~~V~~~~~~~--~~~~~~~F~i~~~-~~r~~~l~Aese~e 92 (160)
+.++.|++.|-+..|.+ -+... .-..++.|+|.++.|...+..+ ...-++.|.|.+. +.+.|.|.|.|+++
T Consensus 248 ~~~~~~~~fLF~d~Ll~-----~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~e 322 (406)
T 2vrw_B 248 RSKTDRYAFLLDKALLI-----CKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTREL 322 (406)
T ss_dssp CSCEEEEEEEESSEEEE-----EEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHH
T ss_pred CccceEEEEecCCEEEE-----EEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHH
Confidence 46799999999888877 44322 2346789999999987764421 1134689999864 45789999999999
Q ss_pred HHHHHHHHHHhHhhccCCCcccccccccCCCCCCCCCcCCCCCCCCCCCCccccccCcccC
Q psy407 93 MIQWMNALSLASILQNSSTGWEDRRLNNEDNDSGFHGTYGRSSNRAKPNNAEQQYLGGVAN 153 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 153 (160)
+++||++|+.|......... ....|.++..+...++.|..|+..+.|+..
T Consensus 323 k~~W~~~i~~ai~~~~~~~~-----------~~~~h~f~~~~~~~~t~C~~C~~~~~g~~~ 372 (406)
T 2vrw_B 323 KKKWMEQFEMAISNIYPENA-----------TANGHDFQMFSFEETTSCKACQMLLRGTFY 372 (406)
T ss_dssp HHHHHHHHHHHHHHHSCTTT-----------TGGGCCEEEECCSSCCBCTTTCCBCCSSSS
T ss_pred HHHHHHHHHHHHhhhhhccc-----------cCCCCCCccccCCCCCCCccccchhceeCC
Confidence 99999999999755443111 112355666677888999999999988643
No 75
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.54 E-value=6.5e-07 Score=79.37 Aligned_cols=121 Identities=18% Similarity=0.119 Sum_probs=87.2
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCc-cCccceEEEcCCeEEEecCCCC--ccCceeeEEEeeCC-ceEEEEEcCCHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFE-EEKLLGSILLPSYKISPCSSDD--KVFRKFSFKAEHAN-MRTYYFAADTRES 92 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~-e~~~~g~I~L~~~~V~~~~~~~--~~~~~~~F~i~~~~-~r~~~l~Aese~e 92 (160)
+.++.|+|.|-+..|.| -|... .-..++.|+|.++.|......+ ...-++.|.|.+.. .++|.|.|.|+++
T Consensus 420 ~~~~~r~~fLF~d~Ll~-----~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~ee 494 (587)
T 3ky9_A 420 RSKMDRYAFLLDKALLI-----CKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTREL 494 (587)
T ss_dssp CSCEEEEEEEETTEEEE-----EEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHH
T ss_pred CCcceEEEEEECCEEEE-----EEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHH
Confidence 57899999999998887 44322 2457899999999988764321 22356789998753 3789999999999
Q ss_pred HHHHHHHHHHhHhhccCCCcccccccccCCCCCCCCCcCCCCCCCCCCCCccccccCcccC
Q psy407 93 MIQWMNALSLASILQNSSTGWEDRRLNNEDNDSGFHGTYGRSSNRAKPNNAEQQYLGGVAN 153 (160)
Q Consensus 93 ~~~Wi~aL~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 153 (160)
+++||++|+.|.....+. ......|.++..+...++.|..|+..+.|+..
T Consensus 495 K~~Wi~~I~~ai~~~~~~-----------~~~~~~H~F~~~~~~~~t~C~~C~~~l~gl~~ 544 (587)
T 3ky9_A 495 KKKWMEQFEMAISNIYPE-----------NATANGHDFQMFSFEETTSCKACQMLLRGTFY 544 (587)
T ss_dssp HHHHHHHHHHHHHHHSCT-----------TTTGGGCCEEEECCSSCCBCTTTCSBCCSSSC
T ss_pred HHHHHHHHHHHhhhhccc-----------cccccCCceeEEeCCCCccccccccccccccc
Confidence 999999999998554431 11223466777788999999999999988653
No 76
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=98.53 E-value=4.4e-07 Score=71.88 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=62.6
Q ss_pred CCceEEEEEEeC-----C--eEEEcccCCCCCCcc----CccceEEEcCCe-EEEecCCCCccCceeeEEEeeCCceEEE
Q psy407 17 TLCHNVYLLLAT-----H--VMVFSPEISGLGFEE----EKLLGSILLPSY-KISPCSSDDKVFRKFSFKAEHANMRTYY 84 (160)
Q Consensus 17 k~WkkRWFVL~~-----~--~L~y~~~~yYk~~~e----~~~~g~I~L~~~-~V~~~~~~~~~~~~~~F~i~~~~~r~~~ 84 (160)
|.||+||+||+. . .|.. |||..+ ...+.+|.|..+ -++....- .++.+.+.|+..+ .++.
T Consensus 21 KkWk~rw~vlrk~s~~adcl~L~v-----Ykd~~dr~k~~~~KaslsL~~~~GlE~g~~l--dk~s~TlAIIc~d-~~~v 92 (224)
T 3ml4_A 21 KKWKSRWLVLRKPSPVADCLLMLV-----YKDKCERSKGLRERSSLTLEDICGLEPALPY--EGLAHTLAIICLS-QAVM 92 (224)
T ss_dssp -CCEEEEEEEECSSTTSSCEEEEE-----ESSSHHHHSCCCCSEEEEECCEEEEEEEEEE--TTEEEEEEEEESS-CEEE
T ss_pred CceeeEEEEEEcCCCchheEEEEE-----EcChhhhhcCCcccceeehHHhcCccccccc--cCcccEEEEEecC-cEEE
Confidence 589999999995 2 4566 998877 567899999885 46664321 1678899999875 5789
Q ss_pred EEcCCHHHHHHHHHHHHHh
Q psy407 85 FAADTRESMIQWMNALSLA 103 (160)
Q Consensus 85 l~Aese~e~~~Wi~aL~~a 103 (160)
|++|++++|.+|-..|+..
T Consensus 93 LAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 93 LGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EECSSHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHhhc
Confidence 9999999999999999874
No 77
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.52 E-value=1.2e-06 Score=62.49 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=65.5
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc-c--CccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE-E--EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~-e--~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
|-|+.|..+.. +.=++++|.|-+.+|.|. .+... . -+....++|.+..|..+.+.+ .-+++|+|... .+
T Consensus 12 G~l~el~~~~~-k~~~~v~~FLfND~Ll~a----~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~--~~~n~f~i~~~-~~ 83 (113)
T 1zc3_B 12 GDLVEYEADHM-AQLQRVHGFLMNDCLLVA----TWLPQRRGMYRYNALYPLDRLAVVNVKDNP--PMKDMFKLLMF-PE 83 (113)
T ss_dssp EEEEEEETTTC-CEEEEEEEEEESSEEEEE----EEECCTTSCEEEEEEEETTTCEEEEECCBT--TBSSEEEEEET-TE
T ss_pred CcEEEEccccC-CCCccEEEEecCCEEEEE----EEeccCcccEEEEEEEEcccCEEEECCCCc--ccceEEEEEeC-Cc
Confidence 66666654433 334557777776677761 11111 1 255667899999888775432 46889999875 47
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 82 TYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+|.|+|+|.+|..+||.+|+.|..
T Consensus 84 s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 84 SRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999863
No 78
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.33 E-value=8.5e-06 Score=60.35 Aligned_cols=90 Identities=9% Similarity=0.005 Sum_probs=65.4
Q ss_pred CCCCCCceEEEEEEeCCeEEEc-ccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC-----ceEEEEE
Q psy407 13 NMASTLCHNVYLLLATHVMVFS-PEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-----MRTYYFA 86 (160)
Q Consensus 13 ~~~~k~WkkRWFVL~~~~L~y~-~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-----~r~~~l~ 86 (160)
|..-++=++|+|-|-...|.|. |...-+....-..++.++|.|..|.....+ .-+|+|.|.+.. .+++.|+
T Consensus 27 K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e---~~p~~~~l~s~~~G~~~k~~i~~~ 103 (140)
T 3qwm_A 27 KPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ---YYPNGIRLTSSVPGADIKVLINFN 103 (140)
T ss_dssp SCCCTTTTEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS---SCTTEEEEEECCTTSCCEEEEEEE
T ss_pred ccccccccceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC---CCceEEEEEecCCCCcceEEEEEE
Confidence 3334456899988887777761 000011122256889999999999887654 468899998642 4789999
Q ss_pred cCCHHHHHHHHHHHHHhHh
Q psy407 87 ADTRESMIQWMNALSLASI 105 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~ 105 (160)
|.|..|+.+||.+|+.|+.
T Consensus 104 A~s~~ER~rwi~dL~esI~ 122 (140)
T 3qwm_A 104 APNPQDRKKFTDDLRESIA 122 (140)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999874
No 79
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.33 E-value=2e-06 Score=72.98 Aligned_cols=90 Identities=16% Similarity=0.184 Sum_probs=62.4
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc--cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCce
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE--EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMR 81 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~--e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r 81 (160)
-|.|+.+.. +.++.|||.|-+..|.| -+... .-...+.|+|.++.|.....+ ..+|.|.|.++. +
T Consensus 247 ~g~l~~~~~----~~~~~r~~fLF~d~Ll~-----~k~~~~~~y~~k~~i~L~~l~v~~~~~~---~~~~~f~i~~~~-~ 313 (434)
T 3mpx_A 247 EGTLMKVTG----KNRRPRHLFLMNDVLLY-----TYPQKDGKYRLKNTLAVANMKVSRPVME---KVPYALKIETSE-S 313 (434)
T ss_dssp CCEEEEEET----TEEEEEEEEEESSEEEE-----EEECTTSCEEEEEEEEC-----CCCCCT---TSCSEEEEECSS-C
T ss_pred cceEEEEeC----CCceEEEEEEECCEEEE-----EEecCCCeEEEEEEEEcCCcEEEecCCC---CCCeeEEEecCC-e
Confidence 355555543 35889999999998887 54322 234778999999888654332 468899998754 6
Q ss_pred EEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 82 TYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 82 ~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
+|.|.|.|++++++||++|+.|+..
T Consensus 314 ~~~l~a~s~~ek~~W~~~i~~ai~e 338 (434)
T 3mpx_A 314 CLMLSASSCAERDEWYGCLSRALPE 338 (434)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999754
No 80
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=98.26 E-value=4.5e-06 Score=69.07 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=63.3
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCc-----------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEE
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFE-----------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~-----------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~ 86 (160)
.++.|+|.|-+..|.+ -|... .-..++.|+|.++.|....+.+ .-+++|.|.+.+...|.|.
T Consensus 258 ~~~~~~~fLF~d~Ll~-----~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~--~~~~~F~i~~~~~~~~~l~ 330 (354)
T 1dbh_A 258 AKHERHIFLFDGLMIC-----CKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN--EYKHAFEIILKDENSVIFS 330 (354)
T ss_dssp CSSCEEEEEESSEEEE-----EEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS--SCCSEEEECCTTSCCEEEE
T ss_pred cCceEEEEEeCCEEEE-----EecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc--ccCccEEEecCCCCEEEEE
Confidence 6789999999888876 33221 1235689999999988865432 4578999987655789999
Q ss_pred cCCHHHHHHHHHHHHHhHh
Q psy407 87 ADTRESMIQWMNALSLASI 105 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~ 105 (160)
|.|++++++||.+|+.|..
T Consensus 331 a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 331 AKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp CSSHHHHHHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999863
No 81
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=98.12 E-value=2e-05 Score=64.21 Aligned_cols=92 Identities=9% Similarity=0.070 Sum_probs=65.4
Q ss_pred ceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeC
Q psy407 5 CFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA 78 (160)
Q Consensus 5 ~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~ 78 (160)
|-++.+......+..+.|+|.|-+..|.+ -+... .-..++.|+|.++.|....+. .++.|.|...
T Consensus 207 ~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~-----~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~----~~~~F~i~~~ 277 (311)
T 1nty_A 207 ESFQVWDPKTLIRKGRERHLFLFEMSLVF-----SKEVKDSSGRSKYLYKSKLFTSELGVTEHVEG----DPCKFALWVG 277 (311)
T ss_dssp EEEEEECSSSSSCCEEEEEEEEESSEEEE-----EEEEECTTCCEEEEEEEEEEGGGEEEECCCTT----CTTEEEEEES
T ss_pred eeEEEEcCcccccccceeEEEeccCeEEE-----EEeeccCCCCceeEEeeeeeccceeeEEccCC----CCceEEEEeC
Confidence 33444443333456799999999988887 43221 123578899999988765432 3457888752
Q ss_pred ----CceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 79 ----NMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 79 ----~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
....|.|+|.|++++++||.+|+.|..
T Consensus 278 ~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~ 308 (311)
T 1nty_A 278 RTPTSDNKIVLKASSIENKQDWIKHIREVIQ 308 (311)
T ss_dssp SSCCTTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEECCCHHHHHHHHHHHHHHHh
Confidence 246799999999999999999999864
No 82
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.10 E-value=3.2e-05 Score=66.35 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=68.8
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc----cCccceEEEcCCeEEEecCCCCc----cCceeeEEE
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE----EEKLLGSILLPSYKISPCSSDDK----VFRKFSFKA 75 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~----e~~~~g~I~L~~~~V~~~~~~~~----~~~~~~F~i 75 (160)
.|.|+.+..+ .+..+.|+|.|-+..|.+ -|... .-..++.|+|.++.|....+.+. ..-+++|+|
T Consensus 337 ~G~l~~~~~~--~~~~~~r~~fLF~d~Ll~-----~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i 409 (466)
T 2pz1_A 337 SGELTRVTQP--QAKSQQRMFFLFDHQLIY-----CKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRL 409 (466)
T ss_dssp EEEEEEECTT--TCCEEEEEEEEETTEEEE-----EEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEE
T ss_pred eeeEEEEecC--CCCeeEEEEEEECCEEEE-----EEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEE
Confidence 3555555432 235789999999988887 44221 13467899999999887654211 123579999
Q ss_pred eeCC-ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 76 EHAN-MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 76 ~~~~-~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+.. .+.|.|+|.|.++..+||++|+.|...
T Consensus 410 ~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 410 HRGATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp ECSSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 8643 468999999999999999999999754
No 83
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.04 E-value=3e-05 Score=56.14 Aligned_cols=81 Identities=7% Similarity=0.048 Sum_probs=55.7
Q ss_pred eEEEEEEeCCeEEEcccCCCCC--CccCccceEEEcCCeE-EEecCCC-C------ccCceeeEEEeeCC-ceEEEEEcC
Q psy407 20 HNVYLLLATHVMVFSPEISGLG--FEEEKLLGSILLPSYK-ISPCSSD-D------KVFRKFSFKAEHAN-MRTYYFAAD 88 (160)
Q Consensus 20 kkRWFVL~~~~L~y~~~~yYk~--~~e~~~~g~I~L~~~~-V~~~~~~-~------~~~~~~~F~i~~~~-~r~~~l~Ae 88 (160)
|.|+|+|.+....+ ||.+ .......+.|.|.... |...... + ......+|.|...+ .++.+|.|+
T Consensus 29 k~r~f~l~~~~~~~----w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~ 104 (131)
T 1mai_A 29 RERFYKLQEDCKTI----WQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAP 104 (131)
T ss_dssp EEEEEEECTTSSEE----EECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECS
T ss_pred eeEEEEECCCCCEE----EeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeC
Confidence 67889998653333 1532 1134478999999964 4443211 0 11245699998865 379999999
Q ss_pred CHHHHHHHHHHHHHhH
Q psy407 89 TRESMIQWMNALSLAS 104 (160)
Q Consensus 89 se~e~~~Wi~aL~~a~ 104 (160)
|+++.+.|+..|+...
T Consensus 105 s~~e~~~Wv~gL~~L~ 120 (131)
T 1mai_A 105 SPADAQHWVQGLRKII 120 (131)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999865
No 84
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=98.04 E-value=3e-05 Score=65.55 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=67.9
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCc----cCccceEEEcCCeEEEecCCCCc----cCceeeEEE
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFE----EEKLLGSILLPSYKISPCSSDDK----VFRKFSFKA 75 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~----e~~~~g~I~L~~~~V~~~~~~~~----~~~~~~F~i 75 (160)
.|.|+.+..+ .+..+.|+|.|-+..|.+ -+... .-...+.|+|.++.|....+.+. ..-+++|+|
T Consensus 260 ~G~l~~~~~~--~~k~~~r~~fLF~d~Ll~-----~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i 332 (402)
T 2dfk_A 260 TGEMAWIYQP--YGRNQQRVFFLFDHQMVL-----CKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKL 332 (402)
T ss_dssp EEEEEEESST--TCCCEEEEEEEETTEEEE-----EEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEE
T ss_pred eceEEEEecc--CCceEEEEEEeeCCEEEE-----EEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEE
Confidence 3455554432 235789999999988887 44221 12467899999999877644211 123578999
Q ss_pred eeCC-ceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 76 EHAN-MRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 76 ~~~~-~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+.. ...|.|+|.|+++...||.+|+.|...
T Consensus 333 ~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 333 HNKETEEVHLFFAKKLEEKIRWLRAFREERKM 364 (402)
T ss_dssp EESSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EECCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 8753 468999999999999999999998653
No 85
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.97 E-value=6.6e-05 Score=63.35 Aligned_cols=84 Identities=19% Similarity=0.184 Sum_probs=60.3
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCcc------------------CccceEEEcCCeEEEecCCCCccCceeeEEEee
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEE------------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEH 77 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e------------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~ 77 (160)
.+.++.|+|.|-++.|.+ -+...+ ....+.|.|.++.|..+... ...|.|.+
T Consensus 307 ~~~~~~~~~fLF~d~Ll~-----~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~-----~~~f~l~~ 376 (418)
T 3t06_A 307 KDKTLDLHVLLLEDLLVL-----LQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD-----KRAFFIIC 376 (418)
T ss_dssp TTBCCEEEEEEESSEEEE-----EEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC-----SSEEEEEE
T ss_pred CCCeEEEEEEecCCEEEE-----EEEcCCceEEeecccccccCCCcccccCCceechhceecccccc-----CceEEEEe
Confidence 346889999999988887 432211 12357899999998865432 33677765
Q ss_pred CC----ceEEEEEcCCHHHHHHHHHHHHHhHhhccC
Q psy407 78 AN----MRTYYFAADTRESMIQWMNALSLASILQNS 109 (160)
Q Consensus 78 ~~----~r~~~l~Aese~e~~~Wi~aL~~a~~~~~~ 109 (160)
.. .++|.|.|.|.++.+.||++|+.|+....+
T Consensus 377 ~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~~~ 412 (418)
T 3t06_A 377 TSKLGPPQIYELVALTSSDKNTWMELLEEAVRNAHH 412 (418)
T ss_dssp CCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred cCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcCcc
Confidence 32 269999999999999999999999755443
No 86
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.95 E-value=7e-05 Score=57.46 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=57.3
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCccCc--------cceEEEcCCeEEEecCCCCccCceeeEEEee--CCceEEEEEc
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFEEEK--------LLGSILLPSYKISPCSSDDKVFRKFSFKAEH--ANMRTYYFAA 87 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~e~~--------~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~--~~~r~~~l~A 87 (160)
.|+.+|++|-+..|.| -+ +.+.+ ....|.|.++.|..+..+ .+-.|-|.+ .+.+.|-|.|
T Consensus 85 ~~~d~~~fLf~D~Ll~-----~~-~~~~ky~~~~~~~~~pvi~L~~~~vre~a~d----~~~~fli~~~~~g~~~yel~a 154 (185)
T 2lg1_A 85 RLKEVQAVLLTDILVF-----LQ-EKDQKYIFASLDQKSTVISLKKLIVREVAHE----EKGLFLISMGMTDPEMVEVHA 154 (185)
T ss_dssp CEEEEEEEEESSEEEC-----CE-EETTEEECCCCSSSCSEEESSSCEEECCSSC----SSEEEEECCSSSCCCCEEEEC
T ss_pred CeeeEEEEeecCEEEE-----EE-ecCCEEEEEcccCCCCeEeecceEEeccCCC----CCeEEEEEecCCCCeEEEEEc
Confidence 7899999999888876 22 11211 236789999998776442 122344432 2357899999
Q ss_pred CCHHHHHHHHHHHHHhHhhcc
Q psy407 88 DTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 88 ese~e~~~Wi~aL~~a~~~~~ 108 (160)
.|.+|++.||.+|+.|+..-.
T Consensus 155 ~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 155 SSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999985543
No 87
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.95 E-value=8.1e-05 Score=61.80 Aligned_cols=81 Identities=19% Similarity=0.117 Sum_probs=60.8
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCCc----------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeC-CceEEEEE
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGFE----------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA-NMRTYYFA 86 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~~----------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~-~~r~~~l~ 86 (160)
.++.|+|.|-+..|.+ -|... .-..++.|+|..+.|..... +.++.|.|... ....|.|.
T Consensus 236 k~~~r~~fLF~d~Ll~-----~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~----~~~~~F~i~~~~~~~~~~l~ 306 (353)
T 1kz7_A 236 KPMQRHLFLHEKAVLF-----CKKREENGEGYEKAPSYSYKQSLNMTAVGITENVK----GDTKKFEIWYNAREEVYIIQ 306 (353)
T ss_dssp SCEEEEEEEESSEEEE-----EEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBT----TBTTEEEEEETTTTEEEEEE
T ss_pred CcceeEEEEECCEEEE-----EEeccccccCCCCCCeEEEEEEeEcccceeeEcCC----CCCceEEEEECCCCcEEEEE
Confidence 4789999999888877 43221 12356789999988866433 23568998763 35789999
Q ss_pred cCCHHHHHHHHHHHHHhHhhc
Q psy407 87 ADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~~~ 107 (160)
|.|++++++||.+|+.|...+
T Consensus 307 a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 307 APTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp CSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987554
No 88
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.88 E-value=0.0001 Score=61.03 Aligned_cols=80 Identities=19% Similarity=0.182 Sum_probs=58.7
Q ss_pred CCCceEEEEEEeCCeEEEcccCCCCCCcc------------------CccceEEEcCCeEEEecCCCCccCceeeEEEee
Q psy407 16 STLCHNVYLLLATHVMVFSPEISGLGFEE------------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEH 77 (160)
Q Consensus 16 ~k~WkkRWFVL~~~~L~y~~~~yYk~~~e------------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~ 77 (160)
.+.++.|+|.|-++.|.+ -+...+ ....+.|+|.++.|..+.. .+.+|.|.+
T Consensus 265 ~~~~~~~~~fLF~d~Ll~-----~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~-----~~~~f~i~~ 334 (368)
T 1xcg_A 265 KDKTLDLHVLLLEDLLVL-----LQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVAT-----DKRAFFIIC 334 (368)
T ss_dssp SSCCCEEEEEEESSEEEE-----EEECSSCEECCC-------------CCCSEEEGGGEEEEECSS-----CSSEEEEEE
T ss_pred CCCeeEEEEEcccccHHH-----hhcccccceeeeccccccCCCCcccCcCCceEccceeeecccC-----CCceEEEEE
Confidence 356899999999888877 332211 1236789999998877532 134677765
Q ss_pred CC----ceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 78 AN----MRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 78 ~~----~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.. .+.|.|+|.|+++++.||.+|+.|..
T Consensus 335 ~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 335 TSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp CCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 32 47899999999999999999999863
No 89
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.86 E-value=9.5e-05 Score=61.78 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=58.8
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCcc------------------CccceEEEcCCeEEEecCCCCccCceeeEEEee-
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEE------------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEH- 77 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e------------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~- 77 (160)
+.++.|+|.|-+..|.+ -+...+ ....+.|+|.++.|..+..+ .+..|.|..
T Consensus 270 ~~~~~~~~fLF~d~Ll~-----~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d----~~~~f~i~~~ 340 (385)
T 1txd_A 270 DKTIDLYTLLLEDILVL-----LQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATD----NKALFVISMS 340 (385)
T ss_dssp SCBCCEEEEEESSEEEE-----EEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-----CCEEEEEEEC
T ss_pred CCeEEEEEEecCCeeEE-----EEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccC----CceEEEEEEc
Confidence 46889999999888876 332111 12468899999988775432 233565553
Q ss_pred -CCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 78 -ANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 78 -~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.+.+.|.|.|.|.++.++||++|+.|....
T Consensus 341 ~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~ 371 (385)
T 1txd_A 341 DNGAQIYELVAQTVSEKTVWQDLICRMAASV 371 (385)
T ss_dssp SSCEEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 235789999999999999999999997544
No 90
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=97.85 E-value=8.3e-05 Score=61.74 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=61.2
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCc---------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeC----CceEE
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFE---------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA----NMRTY 83 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~---------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~----~~r~~ 83 (160)
+..+.|+|.|-+..|.+ -+... .-...+.|+|..+.|..... +.++.|.|.+. ....|
T Consensus 226 ~~~~~r~~fLF~d~Ll~-----~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~----~~~~~F~i~~~~~~~~~~~~ 296 (354)
T 2rgn_B 226 SRGRERRVFLFEQIIIF-----SEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ----GDPCRFALTSRGPEGGIQRY 296 (354)
T ss_dssp CCCCEEEEEEESSEEEE-----EEECC--------CCEEEEEEEEGGGEEEEESGG----GCTTEEEEEEECSSSCEEEE
T ss_pred CCCceEEEEEeCCcEEE-----EEeccCCCCCCCCCceEEcceeeccceeeeeccC----CCCceEEEEecCCCCCceEE
Confidence 46789999999888877 33221 12456789999988876432 23467888752 24789
Q ss_pred EEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 84 YFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 84 ~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.|.|.|.++.++||.+|+.|...+
T Consensus 297 ~l~a~s~~ek~~W~~~i~~ai~~~ 320 (354)
T 2rgn_B 297 VLQAADPAISQAWIKHVAQILESQ 320 (354)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997654
No 91
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.78 E-value=0.00016 Score=59.95 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=56.6
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCcc------------------CccceEEEcCCeEEEecCCCCccCceeeEEEee-
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEE------------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEH- 77 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e------------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~- 77 (160)
+.++.|+|.|-++.|.| -+...+ ......|.|.++.|..+..+ .+..|.|..
T Consensus 272 ~~~~~~~~fLF~d~Ll~-----~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~----~~~~~~i~~~ 342 (377)
T 3p6a_A 272 DKAVEVHVLLLDDLLLL-----LQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD----HKAFYVLFTW 342 (377)
T ss_dssp SCEEEEEEEEESSEEEE-----EEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC----TTEEEEEETT
T ss_pred CCeEEEEEEeeCCEEEE-----EEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccc----cceeEEEecC
Confidence 47899999999988887 332211 01234799999888876442 222344433
Q ss_pred -CCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 78 -ANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 78 -~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
.+...|.|.|.|.+|++.||+.|+.|+.
T Consensus 343 ~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 343 DQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp CTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 2457899999999999999999999974
No 92
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=97.72 E-value=0.00014 Score=59.77 Aligned_cols=80 Identities=16% Similarity=0.198 Sum_probs=59.2
Q ss_pred eEEEEEEeCCeEEEcccCCCCCCcc-C----c-cceEEEcCCeEEEecCCCCc-------------cCceeeEEEeeC--
Q psy407 20 HNVYLLLATHVMVFSPEISGLGFEE-E----K-LLGSILLPSYKISPCSSDDK-------------VFRKFSFKAEHA-- 78 (160)
Q Consensus 20 kkRWFVL~~~~L~y~~~~yYk~~~e-~----~-~~g~I~L~~~~V~~~~~~~~-------------~~~~~~F~i~~~-- 78 (160)
+.|+|.|-+..|.+ -+.... . . .++.|+|.++.|....+.+. ...++.|.|.+.
T Consensus 244 ~~~~~fLF~d~Ll~-----~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~ 318 (346)
T 2z0q_A 244 VKLHVFLFQEVLVI-----TRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNG 318 (346)
T ss_dssp CEEEEEEESSEEEE-----EEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCG
T ss_pred cEEEEEECCCcEEE-----EEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecC
Confidence 78999999888877 443211 1 1 46789999999988654210 023678999753
Q ss_pred -CceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 79 -NMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 79 -~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
...+|.|.|.|+++.++||.+|+.|.
T Consensus 319 ~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 319 SQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp GGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 24799999999999999999999985
No 93
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.71 E-value=0.00022 Score=62.72 Aligned_cols=81 Identities=16% Similarity=0.154 Sum_probs=55.7
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCcc------------------CccceEEEcCCeEEEecCCCCccCceeeEEEeeC
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEE------------------EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA 78 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e------------------~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~ 78 (160)
+.++.|||+|-++.|.| -+...+ ......|.|.++.|..+..+ ...|.+...
T Consensus 425 ~k~~~r~~fLF~D~LL~-----~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d-----~~~ffli~~ 494 (536)
T 3odw_A 425 DKAVEVHVLLLDDLLLL-----LQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD-----HKAFYVLFT 494 (536)
T ss_dssp ---CEEEEEEESSEEEE-----EEEETTEEECCCC------------CCCSEEEGGGEEEEECTTC-----TTEEEEEEC
T ss_pred CCeeEEEEEEcCCEEEE-----EEEcCCeEEEeecccccccccccccccCceeecccceeeccccc-----CCceEEEec
Confidence 46899999999888877 332111 11234799999988886542 124444432
Q ss_pred ---CceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 79 ---NMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 79 ---~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
+...|.|.|.|.+|++.||+.|+.|+...
T Consensus 495 ~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~ 526 (536)
T 3odw_A 495 WDQEAQIYELVAQTVSERKNWCALITETAGSL 526 (536)
T ss_dssp ---CCCEEEEECSSHHHHHHHHHHHHHHHHTS
T ss_pred CCCCceEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 45789999999999999999999997443
No 94
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.65 E-value=6e-05 Score=59.24 Aligned_cols=45 Identities=11% Similarity=0.030 Sum_probs=33.1
Q ss_pred cceEEEEecCCCCCCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCC
Q psy407 4 VCFLIILNDNMASTLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPS 55 (160)
Q Consensus 4 ~~~~~~~~~~~~~k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~ 55 (160)
.|+|.+- .+-.+.||||||||++++|.| |+...+....|.+.-.+
T Consensus 24 ~g~l~~~--~~~~~~w~~rw~vl~~~~~~~-----~~~~~~~~k~G~L~K~g 68 (228)
T 3tfm_A 24 HSFLYMN--GGLMNSWKRRWCVLKDETFLW-----FRSKQEALKQGWLHNNG 68 (228)
T ss_dssp EEEEEEC--CTTTCCCEEEEEEEETTEEEE-----ESSCCCSSEEEEEEECG
T ss_pred EEEEeec--CcccccceEEEEEEeCCEEEE-----eccCCCcceEEEEEEEC
Confidence 3555443 455678999999999999999 88877666666665444
No 95
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=97.60 E-value=0.00013 Score=68.79 Aligned_cols=79 Identities=19% Similarity=0.242 Sum_probs=62.0
Q ss_pred eEEEEEEeCCeEEEcccCCCCCCc-----------cCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCceEEEEEcC
Q psy407 20 HNVYLLLATHVMVFSPEISGLGFE-----------EEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAAD 88 (160)
Q Consensus 20 kkRWFVL~~~~L~y~~~~yYk~~~-----------e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Ae 88 (160)
+.|+|.|-++.|.+ -|... .-..++.|+|.++.|....+.+ .-++.|.|.+.+...|.|.|.
T Consensus 457 ~~r~~FLF~D~Ll~-----~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~--~~~~~F~I~~~~~~~~~L~A~ 529 (1049)
T 3ksy_A 457 HERHIFLFDGLMIC-----CKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN--EYKHAFEIILKDENSVIFSAK 529 (1049)
T ss_dssp SCEEEEEETTEEEE-----EECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSS--SCCSEEEECCTTSCCEEEECS
T ss_pred ceEEEEeeCCeEEE-----EEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCc--cccceEEEEcCCCCEEEEeCC
Confidence 78999999888887 44331 1356789999998887665432 457899998766568999999
Q ss_pred CHHHHHHHHHHHHHhHh
Q psy407 89 TRESMIQWMNALSLASI 105 (160)
Q Consensus 89 se~e~~~Wi~aL~~a~~ 105 (160)
|++++++||++|+.+..
T Consensus 530 S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 530 SAEEKNNWMAALISLQY 546 (1049)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999988753
No 96
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.59 E-value=9e-06 Score=69.95 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=0.0
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccC-------------------ccceEEEcCCeEEEecCCCCccCceeeEEEee
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEE-------------------KLLGSILLPSYKISPCSSDDKVFRKFSFKAEH 77 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~-------------------~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~ 77 (160)
+.++.|||.|-+..|.+ .+-.... -.++.|+|.++.|....+. ...+++|.|.+
T Consensus 263 ~~~~~~~~fLF~d~Ll~-----~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~--~~~~~~F~i~~ 335 (510)
T 3jzy_A 263 KSNKELHGFLFNDFLLL-----TYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDP--SSDEPVFHISH 335 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcEEEEEcccceeEE-----eeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCC--Cccccceeeec
Confidence 45789999999888887 4422111 1256788888887765332 24678999987
Q ss_pred CCceEEEEEcCCHHHHHHHHHHHHHhHhhc
Q psy407 78 ANMRTYYFAADTRESMIQWMNALSLASILQ 107 (160)
Q Consensus 78 ~~~r~~~l~Aese~e~~~Wi~aL~~a~~~~ 107 (160)
.+ ++|.|+|.|++++.+||++|+.|....
T Consensus 336 ~~-~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 336 ID-RVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ------------------------------
T ss_pred cc-eeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 64 789999999999999999999987544
No 97
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=97.52 E-value=0.0004 Score=57.77 Aligned_cols=84 Identities=10% Similarity=0.023 Sum_probs=57.8
Q ss_pred CceEEEEEEeCCeEEEcccCCCCCC-------------------ccCccceEEEcCCeEEEecCCCCccCceeeEEEeeC
Q psy407 18 LCHNVYLLLATHVMVFSPEISGLGF-------------------EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA 78 (160)
Q Consensus 18 ~WkkRWFVL~~~~L~y~~~~yYk~~-------------------~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~ 78 (160)
.-+.|++.|-++.|.+. .|.. ..-...+.|+|.++.|....+.+. .....|.|.+-
T Consensus 258 k~~~~~~fLF~d~lll~----~k~~~~~k~~~~~~~~~s~~~~~~~y~~k~~i~l~~~~v~~~~~~~~-~~~~~f~i~~~ 332 (377)
T 1foe_A 258 KEPELAAFVFKTAVVLV----YKDGSKQKKKLVGSHRLSIYEEWDPFRFRHMIPTEALQVRALPSADA-EANAVCEIVHV 332 (377)
T ss_dssp SSCEEEEEEETTEEEEE----ECCCCCSCCSSCCCTTTTCSSCSCSCCCEEEEEGGGEEEECCCCTTT-TSCCEEEEEEC
T ss_pred ccceEEEEEcCCeEEEE----eccccccccccccccccccccCCCceeEeeeccccceEEEecCCCcc-chhhHHHHHhc
Confidence 45678888887765431 2321 122467899999999988655332 22334777521
Q ss_pred -------CceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 79 -------NMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 79 -------~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
..+.|.|+|.|.++.++||++|+.|...
T Consensus 333 ~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~ 367 (377)
T 1foe_A 333 KSESEGRPERVFHLCCSSPESRKDFLKSVHSILRD 367 (377)
T ss_dssp CBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhH
Confidence 2478999999999999999999998754
No 98
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=97.43 E-value=0.0011 Score=60.90 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=66.8
Q ss_pred EEecCCCCC-CceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCCc-------
Q psy407 9 ILNDNMAST-LCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANM------- 80 (160)
Q Consensus 9 ~~~~~~~~k-~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~~------- 80 (160)
.++..++++ +=|..||||.-..|.+ ||++++..-+-.++|.+..+...... -..+++.|.|-.++.
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 620 (772)
T 3zvr_A 547 TINNIGIMKGGSKEYWFVLTAENLSW-----YKDDEEKEKKYMLSVDNLKLRDVEKG-FMSSKHIFALFNTEQRNVYKDY 620 (772)
T ss_dssp EESSSCCC---CCEEEEEEESSEEEE-----ESSTTCCCEEEEEECTTEEEEEC--------CEEEEEEETTSSCSBTTB
T ss_pred eecccccccCCCccceeecccccccc-----ccchhhhcccccccccccccchhhhc-cccccccccccCCccccccchh
Confidence 333344433 4688999999999999 99988888888999999887766432 235788999987644
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 81 RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 81 r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
+..-|+|+|.++...|.+.+-.|.
T Consensus 621 ~~~~l~~~~~~~~~~~~~~~~~~~ 644 (772)
T 3zvr_A 621 RQLELACETQEEVDSWKASFLRAG 644 (772)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHTT
T ss_pred hhhhhhccccccchhhHHhhhhcc
Confidence 467899999999999999998873
No 99
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=96.96 E-value=0.0035 Score=50.60 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=45.0
Q ss_pred ceEEEcCCeEEEecC-CCCccCceeeEEEeeC-CceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 48 LGSILLPSYKISPCS-SDDKVFRKFSFKAEHA-NMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 48 ~g~I~L~~~~V~~~~-~~~~~~~~~~F~i~~~-~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.+.|+|.-|.|+..- ..| .++++|+|..+ +..+++|+|++.+++.+|+++|..++
T Consensus 205 ~~~ipL~m~~~tR~~~~~d--~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i 261 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 261 (263)
T ss_dssp CEEEESSSEEEEEECCSSC--SSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeeeeeccccC--CCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHh
Confidence 378999999887732 222 47899999887 45679999999999999999999875
No 100
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=96.11 E-value=0.034 Score=50.47 Aligned_cols=78 Identities=12% Similarity=0.166 Sum_probs=57.7
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEEcCCHHHHHH
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQ 95 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~Aese~e~~~ 95 (160)
..|++|+|.|....+.. .- +. ..+...+.+.... |.... ....++|.+...+.++|++.+.|+.++.+
T Consensus 574 ~~~~rR~~~l~p~r~e~-----~~-e~-~~~~~l~~~~~v~~v~k~~----i~~~~~l~~~~k~~k~f~~~t~~~~~~~~ 642 (689)
T 3v5w_A 574 TQWQRRYFYLFPNRLEW-----RG-EG-EAPQSLLTMEEIQSVEETQ----IKERKCLLLKIRGGKQFILQCDSDPELVQ 642 (689)
T ss_dssp --CEEEEEEEETTEEEE-----EC-TT-SCCCEEEEGGGEEEEEEEE----SSSCEEEEEEETTTEEEEEECSSHHHHHH
T ss_pred chhhhhccccCCCcccc-----cc-cC-CCCcceeeeccccccccCc----CCCCcceeeeecCCcEEEEECCChHHHHH
Confidence 47999999999988886 32 22 3455667777733 32221 24567899988888999999999999999
Q ss_pred HHHHHHHhHh
Q psy407 96 WMNALSLASI 105 (160)
Q Consensus 96 Wi~aL~~a~~ 105 (160)
|..+|+.+-.
T Consensus 643 W~~~i~~~~~ 652 (689)
T 3v5w_A 643 WKKELRDAYR 652 (689)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999997654
No 101
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=95.57 E-value=0.053 Score=41.37 Aligned_cols=54 Identities=17% Similarity=0.233 Sum_probs=43.6
Q ss_pred eEEEcCCeEEEe-cCCCCccCceeeEEEeeCC-ceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 49 GSILLPSYKISP-CSSDDKVFRKFSFKAEHAN-MRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 49 g~I~L~~~~V~~-~~~~~~~~~~~~F~i~~~~-~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..|+|.=|.|+. ....| .+...|+|..++ ..+.+|.|.+..+..+|+++|..++
T Consensus 121 ~~IPLkMayvtR~~~~tD--~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni 176 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTD--PEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQI 176 (178)
T ss_dssp EEEETTTCEEEEECCSSC--CSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eeecHHHHHHHHhccCCC--CCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhc
Confidence 579999998877 32223 367799998864 5689999999999999999999865
No 102
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=94.95 E-value=0.084 Score=37.51 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=55.8
Q ss_pred CCceEEEEEEeCCeEEEcccCCCCCCccCccceEEEcCCeEEEecCCCCccCceeeEEEeeCC-ceEEEE--EcCCHH-H
Q psy407 17 TLCHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN-MRTYYF--AADTRE-S 92 (160)
Q Consensus 17 k~WkkRWFVL~~~~L~y~~~~yYk~~~e~~~~g~I~L~~~~V~~~~~~~~~~~~~~F~i~~~~-~r~~~l--~Aese~-e 92 (160)
+.=+.|++-|-+..|.+.+.---.+...-..+..|.|..+.|+....+ +.+..|+|..++ ...|.+ .|.|.+ .
T Consensus 23 ~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~---~d~~kFeiw~~~~~~~~il~~qA~s~e~~ 99 (119)
T 1fho_A 23 EPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD---EDTIVLQPQEPGLPSFRIKPKDFETSEYV 99 (119)
T ss_dssp CSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT---CCEEEEECCSTTCCCBCCCCCSSSSCSHH
T ss_pred CCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC---CCCcEEEEccCCCCceEEEeeecCCcHHH
Confidence 345678888887777763111000011134677999999999885431 223468987654 356777 899999 9
Q ss_pred HHHHHHHHHHh
Q psy407 93 MIQWMNALSLA 103 (160)
Q Consensus 93 ~~~Wi~aL~~a 103 (160)
.+.||+.|+..
T Consensus 100 K~~Wv~~I~~~ 110 (119)
T 1fho_A 100 RKAWLRDIAEE 110 (119)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHHH
Confidence 99999999983
No 103
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=87.82 E-value=4.1 Score=37.57 Aligned_cols=90 Identities=9% Similarity=0.075 Sum_probs=55.9
Q ss_pred eEEEEecCCCCCCceEEEEEEeC--CeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCC----C-------------
Q psy407 6 FLIILNDNMASTLCHNVYLLLAT--HVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSD----D------------- 65 (160)
Q Consensus 6 ~~~~~~~~~~~k~WkkRWFVL~~--~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~----~------------- 65 (160)
-|+.+.+++.. .++|.|.|+. ..|+| ....++. ...|.|.... |...... +
T Consensus 27 ~~~K~~~~s~~--~~~~~f~lD~d~~~L~W-----~~~~k~~--~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~ 97 (816)
T 3qr0_A 27 KFLKWEEGSSG--FIEILLRVDPKGYFLYW-----KIEGKED--TQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSS 97 (816)
T ss_dssp EEEEECTTCCC--CEEEEEEECTTSCEEEE-----CCTTCSS--CEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCT
T ss_pred eEEEECCCCCc--ceeEEEEEcCCCCEEEE-----eCCCCCc--CcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCC
Confidence 45666665542 3789999995 46776 4322222 3678887743 4332211 0
Q ss_pred -ccCceeeEEEeeCCc----eEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 66 -KVFRKFSFKAEHANM----RTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 66 -~~~~~~~F~i~~~~~----r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
.....-+|.|..... +...|.|.++++.+.|+..|+.-+
T Consensus 98 ~~~~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~ 141 (816)
T 3qr0_A 98 NIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYA 141 (816)
T ss_dssp TSCHHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cccccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHH
Confidence 000234788877532 345999999999999999998854
No 104
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=85.54 E-value=4.8 Score=30.89 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=29.9
Q ss_pred eeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhH
Q psy407 71 FSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104 (160)
Q Consensus 71 ~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~ 104 (160)
..|.|........-|.|.|+.+...|+..|+.-.
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Ll 149 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALL 149 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHHHh
Confidence 4899887655789999999999999999999875
No 105
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=82.36 E-value=5.6 Score=36.51 Aligned_cols=78 Identities=9% Similarity=0.007 Sum_probs=48.9
Q ss_pred eEEEEEEeCC--eEEEcccCCCCCCccCccceEEEcCCeE-EEecCCC----C-------------ccCceeeEEEeeCC
Q psy407 20 HNVYLLLATH--VMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSD----D-------------KVFRKFSFKAEHAN 79 (160)
Q Consensus 20 kkRWFVL~~~--~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~----~-------------~~~~~~~F~i~~~~ 79 (160)
++|.|.|+.. .|+| +... +..+.|.|.... |...... + ......+|.|....
T Consensus 34 k~~~frLd~d~~~l~W-----~~~~---k~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg~ 105 (799)
T 2zkm_X 34 SPVILRVDPKGYYLYW-----TYQS---KEMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSGP 105 (799)
T ss_dssp EEEEEEECTTSCEEEE-----EETT---SCEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEECS
T ss_pred eEEEEEEcCCCCEEEE-----ccCC---CcCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEECC
Confidence 5788999743 5666 3211 224688887753 4332100 0 00122378887753
Q ss_pred c----eEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 80 M----RTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 80 ~----r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
. +...|.|.++++.+.|+..|+.-..
T Consensus 106 ~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~ 135 (799)
T 2zkm_X 106 DMVDLTFHNFVSYKENVGKAWAEDVLALVK 135 (799)
T ss_dssp SSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred CccceeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 2 3689999999999999999998653
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=71.18 E-value=15 Score=34.21 Aligned_cols=90 Identities=12% Similarity=0.110 Sum_probs=52.7
Q ss_pred eEEEEecCCCCCCceEEEEEEeC--CeEEEcccCCCCCCccCccceEEEcCCeE-EEecCCC----C-------------
Q psy407 6 FLIILNDNMASTLCHNVYLLLAT--HVMVFSPEISGLGFEEEKLLGSILLPSYK-ISPCSSD----D------------- 65 (160)
Q Consensus 6 ~~~~~~~~~~~k~WkkRWFVL~~--~~L~y~~~~yYk~~~e~~~~g~I~L~~~~-V~~~~~~----~------------- 65 (160)
-|+.+.++.+. =+.+.|.|+. ..|+| .++. +....|.|.... |...... +
T Consensus 26 ~f~K~~~~~~~--~k~~~frLD~d~~~L~W------~~~~--ke~~~l~Is~IkeIR~G~~a~~pKd~klr~~~~~~~~~ 95 (885)
T 3ohm_B 26 KFIKWDEETSS--RNLVTLRVDPNGFFLYW------TGPN--MEVDTLDISSIRDTRTGRYARLPKDPKIREVLGFGGPD 95 (885)
T ss_dssp EEEEECTTCCS--CCEEEEEECTTSCEEEE------ECGG--GCEEEEEGGGEEEEEETTTSCCCCSHHHHHCC------
T ss_pred eEEEECCCCCC--cEEEEEEECCCCCEEEE------eCCC--CCCceEeeehhhhhhcCcCCCCCccHHHHHHhccCccc
Confidence 35566555432 2557788884 36665 3322 223467777643 3222110 0
Q ss_pred ccCceeeEEEeeCCc----eEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 66 KVFRKFSFKAEHANM----RTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 66 ~~~~~~~F~i~~~~~----r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
......+|.|..... +...|.|.++++.+.|+..|+.-..
T Consensus 96 ~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~ 139 (885)
T 3ohm_B 96 ARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM 139 (885)
T ss_dssp ---CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred CcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence 001123688877532 3689999999999999999988553
No 107
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=46.65 E-value=88 Score=23.29 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=52.1
Q ss_pred CCceEEEEEEe-----CCeEEEcccCCCCCCccC----ccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEEE
Q psy407 17 TLCHNVYLLLA-----THVMVFSPEISGLGFEEE----KLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYFA 86 (160)
Q Consensus 17 k~WkkRWFVL~-----~~~L~y~~~~yYk~~~e~----~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l~ 86 (160)
..=|.|+.+|. .+.+.. +|..+.. +..-+=+|.+.+ |+.... ....|.|+. .+.|+..
T Consensus 62 ~~KK~R~L~lav~~~~sgrV~l-----hK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~-----~~~gF~ltl--~K~Y~W~ 129 (171)
T 3hie_A 62 ENKKKRLLILSAKPNNAKLIQI-----HKARENSDGSFQIGRTWQLTELVRVEKDLE-----ISEGFILTM--SKKYYWE 129 (171)
T ss_dssp GGEEEEEEEEEECTTCTTCEEE-----EEEEECTTSCEEEEEEEEGGGCCEEEECSS-----CTTEEEEES--SSEEEEE
T ss_pred CCccceEEEEEEecCCCceEEE-----EEEEECCCCcEEeeeeeecccceeeeccCC-----CCCcEEEEe--CCeEEEe
Confidence 56899998885 124455 5544332 122244676654 333222 133788876 3799999
Q ss_pred cCCHHHHHHHHHHHHHhHhhcc
Q psy407 87 ADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 87 Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
|++.+|+..+|..|-+......
T Consensus 130 a~s~~Er~~FI~sL~K~y~ky~ 151 (171)
T 3hie_A 130 TNSAKERTVFIKSLITLYIQTF 151 (171)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999876544
No 108
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=40.40 E-value=1.5e+02 Score=24.20 Aligned_cols=81 Identities=11% Similarity=0.098 Sum_probs=52.7
Q ss_pred CCCceEEEEEEeC-----CeEEEcccCCCCCCccC----ccceEEEcCCeE-EEecCCCCccCceeeEEEeeCCceEEEE
Q psy407 16 STLCHNVYLLLAT-----HVMVFSPEISGLGFEEE----KLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANMRTYYF 85 (160)
Q Consensus 16 ~k~WkkRWFVL~~-----~~L~y~~~~yYk~~~e~----~~~g~I~L~~~~-V~~~~~~~~~~~~~~F~i~~~~~r~~~l 85 (160)
.+.-|.|+.+|.- +.+.. +|..+.. ...-+-+|.+.+ |+..- ...-.|.|+. .+.||.
T Consensus 131 ~kkKK~R~LcLaV~~d~sGRV~L-----hKaKeN~ngsFsIGKTW~L~ELk~Id~~~-----~~~~gF~LTl--~K~YyW 198 (320)
T 3a58_A 131 LENKKKRLLILSAKPNNAKLIQI-----HKARENSDGSFQIGRTWQLTELVRVEKDL-----EISEGFILTM--SKKYYW 198 (320)
T ss_dssp GGGEEEEEEEEEECSSCTTCEEE-----EEEEECGGGCEEEEEEEEGGGCCEEEECS-----SCTTEEEEES--SSEEEE
T ss_pred ccccCceEEEEEEecCCCceEEE-----EEEEecCCCceEecceechhhhhhhhccc-----CCCCceEEEe--CCceEE
Confidence 5678999988862 23555 5543322 122344676654 33210 1123788876 478999
Q ss_pred EcCCHHHHHHHHHHHHHhHhhcc
Q psy407 86 AADTRESMIQWMNALSLASILQN 108 (160)
Q Consensus 86 ~Aese~e~~~Wi~aL~~a~~~~~ 108 (160)
.|++.+|+.-+|..|-+......
T Consensus 199 ~A~s~kER~~FI~sLvKiy~KYt 221 (320)
T 3a58_A 199 ETNSAKERTVFIKSLITLYIQTF 221 (320)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998776544
No 109
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=35.24 E-value=1.2e+02 Score=21.38 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=29.9
Q ss_pred ceeeEEEeeC-----CceEEEEEcCCHHHHHHHHHHHHHhHhh
Q psy407 69 RKFSFKAEHA-----NMRTYYFAADTRESMIQWMNALSLASIL 106 (160)
Q Consensus 69 ~~~~F~i~~~-----~~r~~~l~Aese~e~~~Wi~aL~~a~~~ 106 (160)
.+..|+|..- ..+.|+|-|.|.+|..+=|..|+.....
T Consensus 73 ~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~ 115 (121)
T 3ulb_A 73 VPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSA 115 (121)
T ss_dssp CTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3447887642 2478999999999999999999987543
No 110
>2rfe_E ERBB receptor feedback inhibitor 1; kinase domain, inhibition, dimer, peptide, alternative splicing, anti-oncogene, ATP-binding, cell cycle; 2.90A {Homo sapiens} PDB: 2rfd_C
Probab=25.55 E-value=34 Score=19.37 Aligned_cols=8 Identities=50% Similarity=0.937 Sum_probs=5.3
Q ss_pred cCCCCCCC
Q psy407 152 ANDPQYSG 159 (160)
Q Consensus 152 ~~~~~~~~ 159 (160)
+.||+|+.
T Consensus 29 a~dpkY~s 36 (40)
T 2rfe_E 29 APDPKYVS 36 (40)
T ss_dssp TTSTTTCC
T ss_pred cCCccccc
Confidence 56777764
No 111
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=23.52 E-value=3.3e+02 Score=23.52 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=32.3
Q ss_pred ceeeEEEeeCCceEEEEEcCCHHHHHHHHHHHHHhHh
Q psy407 69 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASI 105 (160)
Q Consensus 69 ~~~~F~i~~~~~r~~~l~Aese~e~~~Wi~aL~~a~~ 105 (160)
+.+.+.|...+.|.+.|.-..+++..++...|...+.
T Consensus 64 ~~~~l~I~CKDfr~~~f~f~~~~~~~~v~~sL~~~~~ 100 (512)
T 2yf0_A 64 SGCPLVIQCKNFRTVHFIVPRERDCHDIYNSLLQLSK 100 (512)
T ss_dssp TBEEEEEEETTSCEEEEEESCHHHHHHHHHHHHHHSC
T ss_pred CCceEEEEecCCcEEEEEeCChHHHHHHHHHHHhhcC
Confidence 4467999999999999999999999999999988653
Done!