RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy407
(160 letters)
>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding
protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 55.7 bits (133), Expect = 2e-11
Identities = 32/62 (51%), Positives = 38/62 (61%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
EE +LGS+LLPSY I P R+F+F AEH MRTY AADT E + W+ AL
Sbjct: 45 REESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGR 104
Query: 103 AS 104
AS
Sbjct: 105 AS 106
>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 48.8 bits (115), Expect = 7e-09
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 48 LGSILLPSYKISPCSSDDKV---FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
LG+I L ++ S+ + F+ A+ Y+ A T + +W+ A+ +AS
Sbjct: 44 LGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 103
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein
APS {Mouse (Mus musculus) [TaxId: 10090]}
Length = 136
Score = 48.3 bits (114), Expect = 2e-08
Identities = 13/105 (12%), Positives = 28/105 (26%), Gaps = 3/105 (2%)
Query: 10 LNDNMASTLCHNVYLLLATHVMVFSPEIS-GLGFEEEKLLGSILLPSYKISPC-SSDDKV 67
+ + LLL V + + + + SI L + +
Sbjct: 33 ASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMP 92
Query: 68 FRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTG 112
+ +F + N Y W+ + + S+G
Sbjct: 93 EKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGC-VDSGPSSG 136
>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 209
Score = 48.0 bits (113), Expect = 6e-08
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVF-RKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
++++ G + Y + ++ K + F+ + R Y F A + + +W+ L
Sbjct: 143 KDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLK 202
Query: 102 LA 103
Sbjct: 203 FI 204
>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing
protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 99
Score = 43.8 bits (102), Expect = 4e-07
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
++ +L +I LPS K+S ++++ +K + A ++Y +A + E QW+ LS
Sbjct: 37 SQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQ-SWYLSASSAELQQQWLETLS 95
Query: 102 LAS 104
A+
Sbjct: 96 TAA 98
>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 116
Score = 44.1 bits (103), Expect = 4e-07
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVF------RKFSFKAEHANMRTYYFAADTRESMIQ 95
EE + +G L +S + + FK + YY A ++ +
Sbjct: 48 KEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAE 107
Query: 96 WMNALSLAS 104
W+ A+ +
Sbjct: 108 WIEAIKKLT 116
>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 122
Score = 43.7 bits (102), Expect = 6e-07
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
Query: 43 EEEKLLGSILLPSYKISPCS------SDDKVFRKFSFKAEHANMRTYYFAADTRESMIQW 96
+ K + + D +K + + AN + A M QW
Sbjct: 51 KGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQW 110
Query: 97 MNALSLAS 104
+ +L S
Sbjct: 111 VTSLKAQS 118
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 43.4 bits (101), Expect = 1e-06
Identities = 18/93 (19%), Positives = 29/93 (31%), Gaps = 27/93 (29%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHAN----------------------- 79
+ + +G++LL + +I S F FK H
Sbjct: 42 KNGQWVGTVLLNACEIIERPSKK---DGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLP 98
Query: 80 MRTYYFAADTRESMIQWMNALSLASILQNSSTG 112
A + WM+AL LA + S+G
Sbjct: 99 SSYLIIRATSESDGRCWMDALELA-LKSGPSSG 130
>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 42.1 bits (98), Expect = 2e-06
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 49 GSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQ 107
I L + + + RT+Y AD+ E M W+ A+S A + Q
Sbjct: 44 RVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 102
>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain
[TaxId: 10090]}
Length = 106
Score = 42.0 bits (97), Expect = 2e-06
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 47 LLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
+ L K +K FK ++ Y F A E M W+ A+S A
Sbjct: 52 SEVPVSLKEAICEVALDYKK--KKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 42.2 bits (98), Expect = 2e-06
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFK-------AEHANMRTYYFAADTRESMI 94
E+ K G + LP I +++ + KF F+ +Y A ++ M
Sbjct: 42 EEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEME 101
Query: 95 QWMNALSLASILQNSSTG 112
+W+ L S+G
Sbjct: 102 EWVKFLRRV-AGSGPSSG 118
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 111
Score = 40.7 bits (94), Expect = 8e-06
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 45 EKLLGSILLPSYKISPCSSDDKVFRK-FSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
++ G + Y + ++ K +K F+ + R Y F A + + +W+ L
Sbjct: 50 KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFI 109
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and
3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 39.7 bits (92), Expect = 1e-05
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 53 LPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
L + S D R F RT+Y A T +W+ L
Sbjct: 47 LDLTECSAVQFDYSQERVNCFCLVFPF-RTFYLCAKTGVEADEWIKILRWK 96
>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 127
Score = 40.3 bits (93), Expect = 1e-05
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 19/85 (22%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVF------------------RKFSFKAEHANMRTYY 84
+++ G I L + I K + + N Y
Sbjct: 40 TDKEPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYR 99
Query: 85 FAADTRESMIQWMNALSLASILQNS 109
+A + E +WM ++ ASI ++
Sbjct: 100 ISAPSPEEKEEWMKSIK-ASISRDP 123
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 150
Score = 40.1 bits (92), Expect = 2e-05
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
++ GSI L S ++ R+F+F+ + + +Y AAD+ M +W+ L+
Sbjct: 65 ISKEPKGSIFLDSCMGVVQNNKV---RRFAFELKMQDKSSYLLAADSEVEMEEWITILNK 121
Query: 103 ASILQNSSTGWEDRRLNNEDNDS 125
L + E R ++ ++D
Sbjct: 122 ILQLNFEAAMQEKRNGDSHEDDE 144
>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}
Length = 111
Score = 39.5 bits (91), Expect = 2e-05
Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 7/53 (13%)
Query: 61 CSSDDKVFRKFSFKAEHANM-------RTYYFAADTRESMIQWMNALSLASIL 106
+ K F + R A +T+E + W + A +
Sbjct: 57 DVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVY 109
>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 117
Score = 39.6 bits (91), Expect = 2e-05
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 44 EEKLLGSILLPSYKISPCSSDDKVFRK----FSFKAEHANMRTYYFAADTRESMIQWMNA 99
+ + G I L + + K +F R Y F A S QW++
Sbjct: 46 DTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDR 105
Query: 100 LSLASILQNSSTG 112
+ + + S+G
Sbjct: 106 IQ-SCLSSGPSSG 117
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 39.1 bits (90), Expect = 3e-05
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 43 EEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSL 102
+ G I L ++ D R F FK + ++F A E W+ ++
Sbjct: 40 SDNSPKGMIPLKGSTLT-SPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINK 98
Query: 103 A 103
A
Sbjct: 99 A 99
>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for
secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 39.2 bits (90), Expect = 4e-05
Identities = 11/63 (17%), Positives = 23/63 (36%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
++ + + L Y + + +F T FA+D + I W+ A+
Sbjct: 47 EKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMY 106
Query: 102 LAS 104
A+
Sbjct: 107 RAT 109
>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 126
Score = 38.8 bits (89), Expect = 4e-05
Identities = 11/57 (19%), Positives = 26/57 (45%)
Query: 48 LGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
+GS+ L ++ + + +A + Y+ A+ ++ + W+ AL+ AS
Sbjct: 63 VGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQAS 119
>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 38.4 bits (88), Expect = 4e-05
Identities = 13/53 (24%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Query: 49 GSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
SI L S +D K K + + AAD+ W AL
Sbjct: 51 RSIPLESCFNINKRADSK--NKHLVA-LYTRDEHFAIAADSEAEQDSWYQALL 100
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2
isoform [TaxId: 9606]}
Length = 123
Score = 38.5 bits (88), Expect = 6e-05
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 56 YKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTG 112
+ + D RK FK + + Y F A M W+ ++ A I S+G
Sbjct: 68 ARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAA-IASGPSSG 123
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein
SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 37.5 bits (86), Expect = 1e-04
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 69 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
++ F+ + RTY F A + W++ +S
Sbjct: 67 KESCFELTSQDRRTYEFTATSPAEARDWVDQISFL 101
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21
{Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 37.7 bits (86), Expect = 1e-04
Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Query: 45 EKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
+ I + + I S+ K F F A+ R+ M+ W+ + +S
Sbjct: 52 SEEEQPISVNACLIDISYSETKRKNVFRLTTSD---CECLFQAEDRDDMLAWIKTIQESS 108
Query: 105 ILQNSSTGWE-----DRRLNNEDN 123
L TG RR+ +N
Sbjct: 109 NLNEEDTGVTNRDLISRRIKEYNN 132
>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 169
Score = 37.2 bits (85), Expect = 3e-04
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 69 RKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSS 110
+ F+ + Y + T E +W++ L I NS
Sbjct: 97 FPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLK-NVIRYNSD 136
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase
C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 101
Score = 36.2 bits (82), Expect = 3e-04
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRK-FSFKAEHANMRTYYFAADTRESMIQWMNAL 100
+ L G + +P+ +I+ FS + AAD++E + W+ +
Sbjct: 35 TSSDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKI 94
Query: 101 SLAS 104
+
Sbjct: 95 REVA 98
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein
6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 109
Score = 35.8 bits (81), Expect = 5e-04
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 54 PSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTG 112
P + D+ F+ H M Y F AD S +W++A + S+G
Sbjct: 52 PLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG-TVSGPSSG 109
>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 35.7 bits (81), Expect = 6e-04
Identities = 8/65 (12%), Positives = 18/65 (27%), Gaps = 4/65 (6%)
Query: 44 EEKLLGSILLPSYK-ISPCSSDDKVFRKFSFKAEHANM---RTYYFAADTRESMIQWMNA 99
++ L ++ + R +F F +T E +W A
Sbjct: 44 QDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTA 103
Query: 100 LSLAS 104
+ +
Sbjct: 104 IQTVA 108
>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha,
APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 33.8 bits (76), Expect = 0.002
Identities = 5/63 (7%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 42 FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALS 101
+ ++ + + + +D+ R ++ A++++ +W+ ++
Sbjct: 41 RGDVAGGLAMDIDNCSVMAVDCEDR--RYCFQITSFDGKKSSILQAESKKDHEEWICTIN 98
Query: 102 LAS 104
S
Sbjct: 99 NIS 101
>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 33.7 bits (76), Expect = 0.003
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 77 HANMRTYYFAADTRESMIQWMNALSLASILQNSST 111
RT+ F + E W++ L A Q+ ++
Sbjct: 64 VTTQRTFVFRVEKEEERNDWISILLNALKSQSLTS 98
>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 31.1 bits (69), Expect = 0.017
Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 49 GSILLPSYKISPCSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLAS 104
+ L ++ P S D ++ H A + E M W+ L S
Sbjct: 41 QPLSLVGCEVVPDPSPDHLYSFRIL---HKGEELAKLEAKSSEEMGHWLGLLLSES 93
>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2
(beta-adrenergic receptor kinase 1) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 119
Score = 30.8 bits (68), Expect = 0.030
Identities = 5/43 (11%), Positives = 15/43 (34%)
Query: 61 CSSDDKVFRKFSFKAEHANMRTYYFAADTRESMIQWMNALSLA 103
+ ++ + + + + D+ ++QW L A
Sbjct: 59 SVEETQIKERKCLLLKIRGGKQFVLQCDSDPELVQWKKELRDA 101
>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1,
STAP-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 136
Score = 30.7 bits (68), Expect = 0.040
Identities = 3/24 (12%), Positives = 6/24 (25%)
Query: 77 HANMRTYYFAADTRESMIQWMNAL 100
+ ES +W +
Sbjct: 78 VLPKEEVQLKTENTESGEEWRGFI 101
>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 119
Score = 28.3 bits (63), Expect = 0.24
Identities = 10/87 (11%), Positives = 29/87 (33%), Gaps = 7/87 (8%)
Query: 19 CHNVYLLLATHVMVFSPEISGLGFEEEKLLGSILLPSYKISPCSSDDKVFRKFSFKAEHA 78
Y+ L + ++F+ + + SI L Y I ++D+ + +
Sbjct: 25 PKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTDE---DTIVLQPQEP 81
Query: 79 NMRTYY----FAADTRESMIQWMNALS 101
+ ++ + W+ ++
Sbjct: 82 GLPSFRIKPKDFETSEYVRKAWLRDIA 108
>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 162
Score = 27.4 bits (60), Expect = 0.59
Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 20/131 (15%)
Query: 20 HNVYLLLATHVMVFSPEISGLG-----FEEEKLLGSILLPSYKISPCSSDDKVFRKFSFK 74
L H MV + + ++ + + F
Sbjct: 44 QQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLH 103
Query: 75 AEHANMRTYYFAADTRESMIQWMNALSLASILQNSSTGWEDRRLNNEDNDSGFHGTYGRS 134
+ + F A E I+W+ A E+R++ ED GF + +
Sbjct: 104 NKETE-EVHLFFAKKLEEKIRWLRAFR------------EERKMVQEDEKIGFEISE--N 148
Query: 135 SNRAKPNNAEQ 145
R +
Sbjct: 149 QKRQAAMTVRK 159
>d1chka_ d.2.1.7 (A:) Endochitosanase {Streptomyces sp., strain N174
[TaxId: 1931]}
Length = 238
Score = 27.1 bits (60), Expect = 0.96
Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 15/70 (21%)
Query: 99 ALSLASILQNSSTGWEDRRLNNEDNDSGFHGTYGRSS---------------NRAKPNNA 143
A+ L S +NSS W+ + ED G T G +P N
Sbjct: 14 AMELVSSAENSSLDWKAQYKYIEDIGDGRGYTGGIIGFCSGTGDMLELVQHYTDLEPGNI 73
Query: 144 EQQYLGGVAN 153
+YL +
Sbjct: 74 LAKYLPALKK 83
>d2rm0w1 b.72.1.1 (W:1-37) Formin binding protein FBP28 domain
{Domestic mouse (Mus musculus) [TaxId: 10090]}
Length = 37
Score = 24.3 bits (53), Expect = 1.5
Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 81 RTYYFAADTRESMIQW 96
+TYY+ T ES W
Sbjct: 17 KTYYYNNRTLES--TW 30
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 46
Score = 24.4 bits (53), Expect = 1.6
Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 81 RTYYFAADTRESMIQW 96
+ YY+ TRE+ W
Sbjct: 25 KVYYYNPTTRET--SW 38
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein
HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.9 bits (52), Expect = 2.0
Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
Query: 81 RTYYFAADTRESMIQW 96
RTYY+ +T++S W
Sbjct: 12 RTYYYNTETKQS--TW 25
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 29
Score = 23.5 bits (51), Expect = 2.1
Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
Query: 81 RTYYFAADTRESMIQW 96
R YY+ T++S W
Sbjct: 13 RIYYYNTLTKKS--TW 26
>d1qgia_ d.2.1.7 (A:) Endochitosanase {Bacillus circulans [TaxId:
1397]}
Length = 259
Score = 25.6 bits (56), Expect = 3.1
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 95 QWMNALSLASILQNSSTGW 113
QW N + L + + W
Sbjct: 25 QWNNIMKLINKPEQDDLNW 43
>d2dk1a1 b.72.1.1 (A:7-44) WW domain-binding protein 4, WBP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 23.2 bits (50), Expect = 4.3
Identities = 5/16 (31%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
Query: 81 RTYYFAADTRESMIQW 96
YY+ + S QW
Sbjct: 12 YHYYYDLISGAS--QW 25
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.267 0.0661 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 566,552
Number of extensions: 22857
Number of successful extensions: 73
Number of sequences better than 10.0: 1
Number of HSP's gapped: 72
Number of HSP's successfully gapped: 43
Length of query: 160
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 82
Effective length of database: 1,336,656
Effective search space: 109605792
Effective search space used: 109605792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (22.8 bits)