BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4075
         (67 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q99LT0|DPY30_MOUSE Protein dpy-30 homolog OS=Mus musculus GN=Dpy30 PE=1 SV=1
          Length = 99

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76


>sp|Q8K3E7|DPY30_RAT Protein dpy-30 homolog OS=Rattus norvegicus GN=Dpy30 PE=1 SV=1
          Length = 99

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76


>sp|Q9C005|DPY30_HUMAN Protein dpy-30 homolog OS=Homo sapiens GN=DPY30 PE=1 SV=1
          Length = 99

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76


>sp|Q2NKU6|DPY30_BOVIN Protein dpy-30 homolog OS=Bos taurus GN=DPY30 PE=3 SV=1
          Length = 99

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76


>sp|Q10661|DPY30_CAEEL Dosage compensation protein dpy-30 OS=Caenorhabditis elegans
          GN=dpy-30 PE=2 SV=1
          Length = 123

 Score = 40.0 bits (92), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 35 PRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          PR +   +PTRQYLD TVVPILL  L  L K+R
Sbjct: 62 PR-NTSTVPTRQYLDSTVVPILLQGLGALAKDR 93


>sp|P64301|DHMA1_MYCTU Haloalkane dehalogenase 1 OS=Mycobacterium tuberculosis GN=dhmA1
          PE=3 SV=1
          Length = 300

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 28 DGPGLKKPRLDLHALPTRQYLDQTVVPILLAA 59
          +GPG   P + LH  PT  YL +T++P L AA
Sbjct: 41 EGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAA 72


>sp|P64302|DHMA1_MYCBO Haloalkane dehalogenase 1 OS=Mycobacterium bovis (strain ATCC
          BAA-935 / AF2122/97) GN=dhmA1 PE=3 SV=1
          Length = 300

 Score = 30.0 bits (66), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 28 DGPGLKKPRLDLHALPTRQYLDQTVVPILLAA 59
          +GPG   P + LH  PT  YL +T++P L AA
Sbjct: 41 EGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAA 72


>sp|O74861|SDC1_SCHPO Set1 complex component sdc1 OS=Schizosaccharomyces pombe (strain
          972 / ATCC 24843) GN=sdc1 PE=3 SV=1
          Length = 109

 Score = 29.6 bits (65), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 40 HALPTRQYLDQTVVPILLAALTQLTKER 67
          ++ P RQYL++ V P+LL  +  L ++R
Sbjct: 3  NSAPARQYLNEKVTPVLLEGMKILARDR 30


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.310    0.131    0.358 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,861,797
Number of Sequences: 539616
Number of extensions: 931684
Number of successful extensions: 1571
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1563
Number of HSP's gapped (non-prelim): 8
length of query: 67
length of database: 191,569,459
effective HSP length: 39
effective length of query: 28
effective length of database: 170,524,435
effective search space: 4774684180
effective search space used: 4774684180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)