RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4075
         (67 letters)



>d1d1na_ b.43.3.1 (A:) Initiation factor IF2/eIF5b, domains 2 and
          4 {Bacillus stearothermophilus [TaxId: 1422]}
          Length = 99

 Score = 24.3 bits (53), Expect = 1.1
 Identities = 6/13 (46%), Positives = 7/13 (53%)

Query: 10 TGTAEVLKVIKSS 22
           G AEV +  K S
Sbjct: 6  IGQAEVRQTFKVS 18


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.131    0.358 

Gapped
Lambda     K      H
   0.267   0.0677    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 209,427
Number of extensions: 6850
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 67
Length of database: 2,407,596
Length adjustment: 36
Effective length of query: 31
Effective length of database: 1,913,316
Effective search space: 59312796
Effective search space used: 59312796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 47 (22.0 bits)