BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4078
(269 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 165/227 (72%), Positives = 177/227 (77%), Gaps = 30/227 (13%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
G KVS DGKPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVW
Sbjct: 210 GGTNKVSS-DGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVW 268
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKKRA+ MKQQLQQEKDGRK+GYG MQGIPMVASSPVRH+SP+G+N +EV SY
Sbjct: 269 FQNKRCKDKKRAILMKQQLQQEKDGRKLGYGGMQGIPMVASSPVRHESPLGLNPIEVHSY 328
Query: 190 QPPWKALSDFALHTDLDRLDPSAAPFQHLVSQ---------------------------M 222
QPPWKALSDFALHTDLDRLDP+A PFQHLV+Q M
Sbjct: 329 QPPWKALSDFALHTDLDRLDPAAPPFQHLVNQVNFFNLNPPPPHQSFPSTLTNPTFISSM 388
Query: 223 HGYELGHGPPPPHDMGPTPGDMAHPDSTDSYVTYLESDDSLQDNPSP 269
HGY++ HGPP HD+GP P D+ HPDSTDSYVTYLESDD D SP
Sbjct: 389 HGYDI-HGPPSHHDLGPPPNDVGHPDSTDSYVTYLESDDD-HDGSSP 433
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/206 (77%), Positives = 179/206 (86%), Gaps = 5/206 (2%)
Query: 66 NLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
N LG K S DGKPTRVRTVLNEKQLHTLRTCY+ANPRPDALMKEQLVEMT LSPRV
Sbjct: 282 NSRLGSAGKGSS-DGKPTRVRTVLNEKQLHTLRTCYSANPRPDALMKEQLVEMTGLSPRV 340
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALE 185
IRVWFQNKRCKDKKRA+A+KQQ+QQ+KDGRKMGYGSMQGIPMVASSPVRHDSP+GMN ++
Sbjct: 341 IRVWFQNKRCKDKKRAIALKQQIQQDKDGRKMGYGSMQGIPMVASSPVRHDSPLGMNQID 400
Query: 186 VTSYQPPWKALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPH---DMGPTPG 242
V S+QPPWKALS+FALH+DLDR+D S FQ LV+QMHGY++ HGPPPP D+ P P
Sbjct: 401 VQSFQPPWKALSEFALHSDLDRVDTSQPHFQQLVNQMHGYDI-HGPPPPMTRLDIDPGPV 459
Query: 243 DMAHPDSTDSYVTYLESDDSLQDNPS 268
DM HPDSTDS+VTYLESDDSL ++ S
Sbjct: 460 DMMHPDSTDSFVTYLESDDSLHNDTS 485
>gi|328707559|ref|XP_001944557.2| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Acyrthosiphon pisum]
Length = 513
Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/206 (77%), Positives = 179/206 (86%), Gaps = 5/206 (2%)
Query: 66 NLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
N LG K S DGKPTRVRTVLNEKQLHTLRTCY+ANPRPDALMKEQLVEMT LSPRV
Sbjct: 308 NSRLGSAGKGSS-DGKPTRVRTVLNEKQLHTLRTCYSANPRPDALMKEQLVEMTGLSPRV 366
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALE 185
IRVWFQNKRCKDKKRA+A+KQQ+QQ+KDGRKMGYGSMQGIPMVASSPVRHDSP+GMN ++
Sbjct: 367 IRVWFQNKRCKDKKRAIALKQQIQQDKDGRKMGYGSMQGIPMVASSPVRHDSPLGMNQID 426
Query: 186 VTSYQPPWKALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPH---DMGPTPG 242
V S+QPPWKALS+FALH+DLDR+D S FQ LV+QMHGY++ HGPPPP D+ P P
Sbjct: 427 VQSFQPPWKALSEFALHSDLDRVDTSQPHFQQLVNQMHGYDI-HGPPPPMTRLDIDPGPV 485
Query: 243 DMAHPDSTDSYVTYLESDDSLQDNPS 268
DM HPDSTDS+VTYLESDDSL ++ S
Sbjct: 486 DMMHPDSTDSFVTYLESDDSLHNDTS 511
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/207 (71%), Positives = 165/207 (79%), Gaps = 24/207 (11%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 198 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 257
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSD 198
K+ + MK Q+QQEK+GRK+GYG MQGIPMVASSPVRHDSP+ M+ LEVT+YQPPWKALSD
Sbjct: 258 KKTIQMKLQMQQEKEGRKLGYG-MQGIPMVASSPVRHDSPLNMHGLEVTAYQPPWKALSD 316
Query: 199 FALHTDLDR---LDPSAAPFQHLVSQMHGYEL------------GHGPPPPHDMGPTPGD 243
FALH+DLD ++ FQHLV+QMHGY++ G GPP M D
Sbjct: 317 FALHSDLDSNGAINTHTPAFQHLVNQMHGYDVGGGGGMQQMPAQGQGPPIASHM-----D 371
Query: 244 MA---HPDSTDSYVTYLESDDSLQDNP 267
M+ HPDSTDSYVTYLESDDS+Q +P
Sbjct: 372 MSGHHHPDSTDSYVTYLESDDSMQGSP 398
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/200 (73%), Positives = 159/200 (79%), Gaps = 21/200 (10%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
PTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 239 PTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKT 298
Query: 142 LAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFAL 201
L MKQQ+QQEKDGRK+GYG+MQGIPMVASSPVRHDSPIG++ LEV +YQPPWKALSDFAL
Sbjct: 299 LLMKQQMQQEKDGRKLGYGAMQGIPMVASSPVRHDSPIGVHPLEVQAYQPPWKALSDFAL 358
Query: 202 HTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGD--------------MAHP 247
H DL++ P FQ LV+QMHGY+L PP MGP G M HP
Sbjct: 359 HADLEQ--PHQPAFQQLVNQMHGYDL-----PPPSMGPATGPPPGMLPSSAPPSDVMTHP 411
Query: 248 DSTDSYVTYLESDDSLQDNP 267
DSTDSYVTYLESD+SL +P
Sbjct: 412 DSTDSYVTYLESDESLPASP 431
>gi|380018327|ref|XP_003693083.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis florea]
Length = 419
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 162/219 (73%), Gaps = 31/219 (14%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 202 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 261
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+AMKQQ+Q EKDGRK+G+G M GIPMVASSPVRH+S IGM LEV +YQPPWKALSDFA
Sbjct: 262 TIAMKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESSIGMTPLEVQAYQPPWKALSDFA 320
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPP--PPHDM--------------------- 237
LHTDLDRLDP+ F HLVSQMHGY+L GPP PP M
Sbjct: 321 LHTDLDRLDPNTPSFHHLVSQMHGYDLHSGPPQLPPPGMLGGPMNDGGGGGGGGSLPPPG 380
Query: 238 ----GPTPGDMA-HPDSTDSYVTYLESD-DSL-QDNPSP 269
DM HPDSTDSYVTYLESD DSL D SP
Sbjct: 381 PHHPSGGGPDMGQHPDSTDSYVTYLESDSDSLHHDTGSP 419
>gi|328793255|ref|XP_003251852.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Apis
mellifera]
Length = 418
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 162/219 (73%), Gaps = 31/219 (14%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 201 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 260
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+AMKQQ+Q EKDGRK+G+G M GIPMVASSPVRH+S IGM LEV +YQPPWKALSDFA
Sbjct: 261 TIAMKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESSIGMTPLEVQAYQPPWKALSDFA 319
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPP--PPHDM--------------------- 237
LHTDLDRLDP+ F HLVSQMHGY+L GPP PP M
Sbjct: 320 LHTDLDRLDPNTPSFHHLVSQMHGYDLHSGPPQLPPPGMLGGPMNDGGGGGGGGSLPPPG 379
Query: 238 ----GPTPGDMA-HPDSTDSYVTYLESD-DSL-QDNPSP 269
DM HPDSTDSYVTYLESD DSL D SP
Sbjct: 380 PHHPSGGGPDMGQHPDSTDSYVTYLESDSDSLHHDTGSP 418
>gi|383858654|ref|XP_003704814.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Megachile
rotundata]
Length = 416
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 162/219 (73%), Gaps = 31/219 (14%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 199 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 258
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+AMKQQ+Q EKDGRK+G+G M GIPMVASSPVRH+S IGM LEV +YQPPWKALSDFA
Sbjct: 259 TIAMKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESSIGMTPLEVQAYQPPWKALSDFA 317
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPP--PPHDM--------------------- 237
LHTDLDRLDP+ F HLVSQMHGY+L GPP PP M
Sbjct: 318 LHTDLDRLDPNTPSFHHLVSQMHGYDLHSGPPQLPPPGMLGGPMNDGGGGGGGGPLPPPG 377
Query: 238 ----GPTPGDMA-HPDSTDSYVTYLESD-DSL-QDNPSP 269
DM HPDSTDSYVTYLESD DSL D SP
Sbjct: 378 PHHPSSGGPDMGQHPDSTDSYVTYLESDSDSLHHDTGSP 416
>gi|195035223|ref|XP_001989077.1| GH11521 [Drosophila grimshawi]
gi|193905077|gb|EDW03944.1| GH11521 [Drosophila grimshawi]
Length = 283
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/225 (65%), Positives = 168/225 (74%), Gaps = 28/225 (12%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 59 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 118
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 119 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 178
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHGPP-PPH---------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L P PPH
Sbjct: 179 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPAQGPHPGGG 238
Query: 236 ----DMGPTPGDMA---------HPDSTDSYVTYLESDDSLQDNP 267
M PG + HPDSTDSYVTYLESDDS+Q +P
Sbjct: 239 PPGQQMNGPPGGSSMDSGITSHHHPDSTDSYVTYLESDDSMQGSP 283
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 159/204 (77%), Gaps = 25/204 (12%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
PTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 215 PTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKT 274
Query: 142 LAMKQQLQQEK----DGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALS 197
L MKQQ+QQEK DGRK+GYG+MQGIPMVASSPVRHDSPIG++ LEV +YQPPWKALS
Sbjct: 275 LLMKQQMQQEKYYVQDGRKLGYGAMQGIPMVASSPVRHDSPIGVHPLEVQAYQPPWKALS 334
Query: 198 DFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGD-------------- 243
DFALH DL++ P FQ LV+QMHGY+L PP MGP G
Sbjct: 335 DFALHADLEQ--PHQPAFQQLVNQMHGYDL-----PPPSMGPATGPPPGMLPSSAPPSDV 387
Query: 244 MAHPDSTDSYVTYLESDDSLQDNP 267
M HPDSTDSYVTYLESD+SL +P
Sbjct: 388 MTHPDSTDSYVTYLESDESLPASP 411
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 162/212 (76%), Gaps = 24/212 (11%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 241 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 300
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSD 198
K+ + MK Q+QQEK+GRK+GYG MQGIPMVASSPVRHDSP+ ++ LEVT+YQPPWKALSD
Sbjct: 301 KKTIQMKLQMQQEKEGRKLGYG-MQGIPMVASSPVRHDSPLNLHGLEVTAYQPPWKALSD 359
Query: 199 FALHTDLD---RLDPSAAPFQHLVSQMHGYELGHGPP--------------------PPH 235
FALH+DLD ++ FQHLV+QMHGY++G+G PP
Sbjct: 360 FALHSDLDSNGSINTHTPAFQHLVNQMHGYDVGNGGGGGPGGGPGGMPPMPGQGGQVPPI 419
Query: 236 DMGPTPGDMAHPDSTDSYVTYLESDDSLQDNP 267
HPDSTDSYVTYLESDDS+Q +P
Sbjct: 420 GSHMDLSGHHHPDSTDSYVTYLESDDSMQGSP 451
>gi|340717324|ref|XP_003397134.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
terrestris]
gi|350407611|ref|XP_003488142.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Bombus
impatiens]
Length = 458
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 162/219 (73%), Gaps = 31/219 (14%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 241 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 300
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+AMKQQ+Q EKDGRK+G+G M GIPMVASSPVRH+S IGM LEV +YQPPWKALSDFA
Sbjct: 301 TIAMKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESSIGMTPLEVQAYQPPWKALSDFA 359
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPP--PPHDM--------------------- 237
LHTDL+RLDP+ F HLVSQMHGY+L GPP PP M
Sbjct: 360 LHTDLERLDPNTPSFHHLVSQMHGYDLHSGPPQLPPPGMLGGPMNDGGGGGGGGSLPPPG 419
Query: 238 ----GPTPGDMA-HPDSTDSYVTYLESD-DSL-QDNPSP 269
DM HPDSTDSYVTYLESD DSL D SP
Sbjct: 420 PHHPSSGGPDMGQHPDSTDSYVTYLESDSDSLHHDTGSP 458
>gi|156552953|ref|XP_001603153.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Nasonia
vitripennis]
Length = 458
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/154 (84%), Positives = 140/154 (90%)
Query: 74 KVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
K G DGKPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNK
Sbjct: 228 KGGGSDGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNK 287
Query: 134 RCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPW 193
RCKDKK+ +AMKQQ+QQEKDGRK+G+G M GIPMVASSPVRH+SPIGM LEV +YQPPW
Sbjct: 288 RCKDKKKTIAMKQQMQQEKDGRKLGFGGMHGIPMVASSPVRHESPIGMTPLEVQAYQPPW 347
Query: 194 KALSDFALHTDLDRLDPSAAPFQHLVSQMHGYEL 227
KALSDFALHTDLDRLDP+A F HLVSQMHGY++
Sbjct: 348 KALSDFALHTDLDRLDPNAPSFHHLVSQMHGYDM 381
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 160/217 (73%), Gaps = 26/217 (11%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELG------------------ 228
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPPQGPHPPPP 408
Query: 229 ----HGPPPPHDMGPTPGDMAHPDSTDSYVTYLESDD 261
+GPP M HPDSTDSYVTYLESDD
Sbjct: 409 GQQMNGPPGGSSMDSGITSHHHPDSTDSYVTYLESDD 445
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 160/217 (73%), Gaps = 26/217 (11%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELG------------------ 228
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPPQGPHPPPP 408
Query: 229 ----HGPPPPHDMGPTPGDMAHPDSTDSYVTYLESDD 261
+GPP M HPDSTDSYVTYLESDD
Sbjct: 409 GQQMNGPPGGSSMDSGITSHHHPDSTDSYVTYLESDD 445
>gi|312379882|gb|EFR26035.1| hypothetical protein AND_08145 [Anopheles darlingi]
Length = 324
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 163/216 (75%), Gaps = 33/216 (15%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 115 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 174
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSD 198
K+ + MK Q+QQEK+GRK+GYG MQGIPMVASSPVRHDSP+ ++ LEVT+YQPPWKALSD
Sbjct: 175 KKTIQMKLQMQQEKEGRKLGYG-MQGIPMVASSPVRHDSPLNLHGLEVTAYQPPWKALSD 233
Query: 199 FALHTDLDR---LDPSAAPFQHLVSQMHGYEL----------------------GHGPPP 233
FALH+DLD ++ FQHLV+QMHGY++ G P
Sbjct: 234 FALHSDLDSNGAINTHTPAFQHLVNQMHGYDVGNGAGGGPGGGPGGMPPMPGQGAQGAPL 293
Query: 234 PHDMGPTPGDMA--HPDSTDSYVTYLESDDSLQDNP 267
M D++ HPDSTDSYVTYLESDDS+Q +P
Sbjct: 294 GSHM-----DLSGHHPDSTDSYVTYLESDDSMQGSP 324
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 159/217 (73%), Gaps = 26/217 (11%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVW
Sbjct: 229 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELG------------------ 228
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPPQGPHPPPP 408
Query: 229 ----HGPPPPHDMGPTPGDMAHPDSTDSYVTYLESDD 261
+GPP + HPDSTDSYVTYLESDD
Sbjct: 409 GQQMNGPPGGSSLDSGITSHHHPDSTDSYVTYLESDD 445
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 162/220 (73%), Gaps = 29/220 (13%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 227 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 286
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 287 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 346
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELG------------------ 228
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L
Sbjct: 347 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPPHQGPHPPP 406
Query: 229 -----HGPPPPHDMGPTPGDMA--HPDSTDSYVTYLESDD 261
+GPP P G + HPDSTDSYVTYLESDD
Sbjct: 407 PVQQMNGPPGPGGSSLDSGITSHHHPDSTDSYVTYLESDD 446
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 154/208 (74%), Gaps = 25/208 (12%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 246 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 305
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSD 198
K+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +YQPPWKALSD
Sbjct: 306 KKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTYQPPWKALSD 365
Query: 199 FALHTDLDR---LDPSAAPFQHLVSQMHGYELG----------------------HGPPP 233
FALH DLD ++ FQ LV+QMHGY+L +GPP
Sbjct: 366 FALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPPQGPHPPPPGQQMNGPPG 425
Query: 234 PHDMGPTPGDMAHPDSTDSYVTYLESDD 261
+ HPDSTDSYVTYLESDD
Sbjct: 426 GSSLDSGITSHHHPDSTDSYVTYLESDD 453
>gi|17136566|ref|NP_476774.1| tailup, isoform B [Drosophila melanogaster]
gi|5052638|gb|AAD38649.1|AF145674_1 tailup [Drosophila melanogaster]
gi|22946785|gb|AAN11018.1| tailup, isoform B [Drosophila melanogaster]
gi|220942306|gb|ACL83696.1| tup-PB [synthetic construct]
gi|220952524|gb|ACL88805.1| tup-PB [synthetic construct]
Length = 465
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/239 (61%), Positives = 167/239 (69%), Gaps = 44/239 (18%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 RDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPH-------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 236 ---------------------------DMGPTPGDMAHPDSTDSYVTYLESDDSLQDNP 267
D G T HPDSTDSYVTYLESDDS+Q +P
Sbjct: 409 HQHPPPPGGPHNHQNQQPNQQPGGSSLDSGIT--SHHHPDSTDSYVTYLESDDSMQGSP 465
>gi|332023208|gb|EGI63464.1| Insulin gene enhancer protein ISL-1 [Acromyrmex echinatior]
Length = 432
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 159/223 (71%), Gaps = 41/223 (18%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 217 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 276
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+AMKQQ+Q EKDGRK+G+G M GIPMVASSPVRH+SPIGM LEV +YQPPWKALS+FA
Sbjct: 277 TIAMKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESPIGMTPLEVQAYQPPWKALSEFA 335
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYEL--------------------------------G 228
LHTDL+RLDP+A F HLVSQMHGY+L
Sbjct: 336 LHTDLERLDPNAPSFHHLVSQMHGYDLHGGPPPQLAPPPGMLGGPMSDGGGGPLPPPGPH 395
Query: 229 HGPPPPHDMGPTPGDMAHPDSTDSYVTYLESD-DSL-QDNPSP 269
H DMG HPDSTDSYVTY+ESD DS D SP
Sbjct: 396 HPGGGGPDMG------QHPDSTDSYVTYVESDSDSFHHDTGSP 432
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/231 (61%), Positives = 162/231 (70%), Gaps = 40/231 (17%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPHDM------ 237
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 238 ------------------GPTPGDMA---------HPDSTDSYVTYLESDD 261
PG + HPDSTDSYVTYLESDD
Sbjct: 409 HQHPPPPGGPHNHQNQHPNQQPGGSSLDSGITSHHHPDSTDSYVTYLESDD 459
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 143/231 (61%), Positives = 162/231 (70%), Gaps = 40/231 (17%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 RDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPHDM------ 237
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 238 ------------------GPTPGDMA---------HPDSTDSYVTYLESDD 261
PG + HPDSTDSYVTYLESDD
Sbjct: 409 HQHPPPPGGPHNHQNQHPNQQPGGSSLDSGITSHHHPDSTDSYVTYLESDD 459
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/233 (61%), Positives = 162/233 (69%), Gaps = 44/233 (18%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 RDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPH-------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 236 ---------------------------DMGPTPGDMAHPDSTDSYVTYLESDD 261
D G T HPDSTDSYVTYLESDD
Sbjct: 409 HQHPPPPGGPHNHQNQQPNQQPGGSSLDSGIT--SHHHPDSTDSYVTYLESDD 459
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/233 (61%), Positives = 162/233 (69%), Gaps = 44/233 (18%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 RDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPH-------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 236 ---------------------------DMGPTPGDMAHPDSTDSYVTYLESDD 261
D G T HPDSTDSYVTYLESDD
Sbjct: 409 HQHPPPPGGPHNHQNQQPNQQPGGSSLDSGIT--SHHHPDSTDSYVTYLESDD 459
>gi|307209962|gb|EFN86739.1| Insulin gene enhancer protein ISL-1 [Harpegnathos saltator]
Length = 407
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/222 (65%), Positives = 158/222 (71%), Gaps = 40/222 (18%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 193 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 252
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+A+KQQ+Q EKDGRK+G+G M GIPM+ASSPVRHDS IG+ ALEV +YQPPWKALSDFA
Sbjct: 253 TIALKQQMQ-EKDGRKLGFGGMHGIPMIASSPVRHDSSIGVTALEVHAYQPPWKALSDFA 311
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYEL-------------------------------GH 229
LHTDLDRLD +A F +LVSQMHGY+L H
Sbjct: 312 LHTDLDRLDTNAPSFHNLVSQMHGYDLHGGPPPQLPPPGMLGGPMNDGGGGPLPPPGPHH 371
Query: 230 GPPPPHDMGPTPGDMAHPDSTDSYVTYLESD-DSL-QDNPSP 269
DMG HPDSTDSYVTY+ESD DS D SP
Sbjct: 372 PGSGGPDMGQ------HPDSTDSYVTYVESDSDSFHHDTGSP 407
>gi|307184076|gb|EFN70611.1| Insulin gene enhancer protein ISL-1 [Camponotus floridanus]
Length = 408
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/223 (63%), Positives = 159/223 (71%), Gaps = 41/223 (18%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 193 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 252
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+A+KQQ+Q EKDGRK+G+G M GIPMVASSPVRH+SPIGM LEV +Y+PPW+ALS+FA
Sbjct: 253 TIALKQQMQ-EKDGRKLGFGGMHGIPMVASSPVRHESPIGMTPLEVQAYKPPWEALSEFA 311
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHG------------------------------ 230
LHTDL+RLDP+A F HL+SQMHGYE+ G
Sbjct: 312 LHTDLERLDPNAPSFHHLMSQMHGYEMHRGPPPQLPPPGMLGGPMSDGGGGPLPPPGPHH 371
Query: 231 --PPPPHDMGPTPGDMAHPDSTDSYVTYLESD-DSL-QDNPSP 269
DMG HPDSTDS+VTY+ESD DS D SP
Sbjct: 372 PGGGGGPDMG------QHPDSTDSFVTYVESDSDSFHHDTGSP 408
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/238 (60%), Positives = 161/238 (67%), Gaps = 47/238 (19%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVW
Sbjct: 231 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVW 290
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 291 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 350
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHGPP-PPH---------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L P PPH
Sbjct: 351 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPVLPPHPQSHSAQGPP 410
Query: 236 ------------------------------DMGPTPGDMA--HPDSTDSYVTYLESDD 261
D G T HPDSTDSYVTYLESDD
Sbjct: 411 HQHPPPPGGPHNHQNSNQQPGGQPGQGSSLDSGITSHSHLSNHPDSTDSYVTYLESDD 468
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/233 (60%), Positives = 161/233 (69%), Gaps = 44/233 (18%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT+LSPRVIRVW
Sbjct: 229 RDKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVW 288
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+ +EK+GRK+GYG+MQGIPM+ASSPVRHDSP+ + L+V +Y
Sbjct: 289 FQNKRCKDKKKTIQMKLQMHEEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQTY 348
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHG---PPPPH-------- 235
QPPWKALSDFALH DLD ++ FQ LV+QMHGY+L PP PH
Sbjct: 349 QPPWKALSDFALHADLDSNGAINTHTPAFQQLVNQMHGYDLNGMPILPPHPHSHPAQGPP 408
Query: 236 ---------------------------DMGPTPGDMAHPDSTDSYVTYLESDD 261
D G T HPDSTDSYVTYLESDD
Sbjct: 409 HQHPPPPGGPHNHQNQQPNQQPGGSSLDSGIT--SHHHPDSTDSYVTYLESDD 459
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 162/215 (75%), Gaps = 30/215 (13%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQL TLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 228 DGKPTRVRTVLNEKQLQTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 287
Query: 139 KRALAMKQQLQQEK-----------DGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVT 187
K+ + MK Q+QQEK +GRK+GYG MQGIPMVASSPVRHDSP+ ++ LEVT
Sbjct: 288 KKTIQMKLQMQQEKVPQLLYYSSSPEGRKLGYG-MQGIPMVASSPVRHDSPLNLHGLEVT 346
Query: 188 SYQPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPG-- 242
+YQPPWKALSDFALH+DLD ++ FQHLV+QMHGY++G G H MGP G
Sbjct: 347 AYQPPWKALSDFALHSDLDSNGAINTHTPAFQHLVNQMHGYDVG-GGGGMHQMGPQGGQG 405
Query: 243 -------DMA---HPDSTDSYVTYLESDDSLQDNP 267
DM+ HPDSTDSYV SDDS+Q +P
Sbjct: 406 PLMGSHMDMSGYHHPDSTDSYV--YASDDSMQGSP 438
>gi|357617942|gb|EHJ71081.1| insulinprotein enhancer protein isl [Danaus plexippus]
Length = 273
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 151/189 (79%), Gaps = 18/189 (9%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 103 DGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 162
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSD 198
K+ + +K Q+QQEK+GR++GY SM G+P+VA SPVRH++ G ALEVT+YQPPWKALSD
Sbjct: 163 KKTIQLKMQMQQEKEGRRLGYMSM-GVPLVAGSPVRHEA--GSLALEVTAYQPPWKALSD 219
Query: 199 FALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAHPDSTDSYVTYLE 258
FALH DLDR SAA FQ LV+QMHGY++ PPP H+ D+YVTYLE
Sbjct: 220 FALHADLDRPQHSAA-FQQLVNQMHGYDIPSLPPPRHE--------------DNYVTYLE 264
Query: 259 SDDSLQDNP 267
SDDSL +P
Sbjct: 265 SDDSLPPSP 273
>gi|293339636|gb|ADE44110.1| tailup [Megaselia abdita]
Length = 348
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/161 (74%), Positives = 139/161 (86%), Gaps = 4/161 (2%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVW
Sbjct: 155 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVW 214
Query: 130 FQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
FQNKRCKDKK+ + MK Q+QQEK+GRK+GYG+MQGIPMVASSPVRHDSP+ ++ ++V +Y
Sbjct: 215 FQNKRCKDKKKTIQMKLQMQQEKEGRKLGYGAMQGIPMVASSPVRHDSPLNLHGIDVQTY 274
Query: 190 QPPWKALSDFALHTDLDR---LDPSAAPFQHLVSQMHGYEL 227
QPPWKALSDFAL+ DLD ++ FQ LV+QMHGY+L
Sbjct: 275 QPPWKALSDFALNADLDNNGVMNTHTPAFQQLVNQMHGYDL 315
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 123/145 (84%), Gaps = 1/145 (0%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DGKPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 161 DGKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDK 220
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVT-SYQPPWKALS 197
K+A+ MKQ QQEKDGRK+G+GSMQGIP++ASSPVRH V ++ PPWKAL+
Sbjct: 221 KKAILMKQIQQQEKDGRKLGFGSMQGIPLIASSPVRHGESSPSGGSGVVHAFAPPWKALA 280
Query: 198 DFALHTDLDRLDPSAAPFQHLVSQM 222
+FALH DL+R+DPSA FQ L++Q+
Sbjct: 281 EFALHNDLERIDPSAPHFQQLINQV 305
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 127/153 (83%), Gaps = 4/153 (2%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
GG+ KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCK
Sbjct: 269 GGEHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCK 328
Query: 137 DKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGM--NALEVTSYQPPWK 194
DKKR++ MKQ Q EKDGR++ G+++G+PMVA+SPVRH+ G AL++ +YQ PWK
Sbjct: 329 DKKRSIMMKQMQQSEKDGRQLSLGALRGVPMVATSPVRHEPGQGQLSQALDIQAYQAPWK 388
Query: 195 ALSDFAL-HTDLDRLDPSAAPFQHLVSQMHGYE 226
LS++A+ H D D LDP++ F+ LV+QMHGY+
Sbjct: 389 TLSEYAISHPDSD-LDPNSPQFRQLVNQMHGYD 420
>gi|306020805|gb|ADM79456.1| islet [Cupiennius salei]
Length = 249
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/119 (79%), Positives = 107/119 (89%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
G D KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCK
Sbjct: 131 GSDHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCK 190
Query: 137 DKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKA 195
DKK+++ MKQ QQEKDGR++ GSM+G+PMVA+SPVRH+SPI +N +EV +YQPPWKA
Sbjct: 191 DKKKSIMMKQLQQQEKDGRQLSLGSMRGVPMVATSPVRHESPIQINPIEVQTYQPPWKA 249
>gi|348505840|ref|XP_003440468.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oreochromis
niloticus]
Length = 359
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 121/175 (69%), Gaps = 18/175 (10%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RHD+ + N +EV SYQPPWK LSDFA
Sbjct: 250 SILMK-QLQQQQHNDKTNLQGLTGTPLVAGSPIRHDNTVQGNPVEVQSYQPPWKTLSDFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHG------------PPPPHDMGPTPGD 243
L TDLD+ FQ LVS LG+ P P+ M P+P D
Sbjct: 309 LQTDLDQ-----PAFQQLVSFSEAGSLGNSSGSDVTSLSSQLPDTPNSMVPSPVD 358
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 121/177 (68%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SILMK-QLQQQQPNDKTNIQGMTGTPMVATSPERHDGGLQANQVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|1708565|sp|P53409.1|ISL3_ONCTS RecName: Full=Insulin gene enhancer protein ISL-3; Short=Islet-3
Length = 363
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 113/142 (79%), Gaps = 8/142 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALM+EQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMREQLVEMTGLSPRVIRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGI---PMVASSPVRHDSPIGMNALEVTSYQPPWKALS 197
++ MKQ QQ+ + + S+QG+ P+VA SP+RHD+ + N++EV +YQPPWKALS
Sbjct: 250 SILMKQLQQQQHSDKTVSIFSLQGLTGTPLVARSPIRHDNTVQGNSVEVQTYQPPWKALS 309
Query: 198 DFALHTDLDRLDPSAAPFQHLV 219
+FAL +DLD+ FQ LV
Sbjct: 310 EFALQSDLDQ-----PAFQQLV 326
>gi|1708557|sp|P53408.1|ISL2A_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2A; Short=Islet-2A
Length = 358
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 189 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 248
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ+ K + G P+VA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 249 SIFMK-QLQQQHHSDKTNLQGLTGTPLVAGSPIRHDNTVQGNPVEVQTYQPPWKALSEFA 307
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 308 LQSDLDQ-----PAFQQLVS 322
>gi|1708562|sp|P53410.1|ISL2_CHICK RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531181|gb|AAA62172.1| sequence encoding 37 predicted 5' amino acids has not been
determined, partial [Gallus gallus]
Length = 319
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 113/140 (80%), Gaps = 5/140 (3%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 149 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 208
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SPVRH+S + +A+EV +YQPPWKALSDFA
Sbjct: 209 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPVRHESAVQGSAVEVQTYQPPWKALSDFA 267
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +D L+P AA FQ LVS
Sbjct: 268 LQSD---LEPPAA-FQQLVS 283
>gi|18858907|ref|NP_571045.1| insulin gene enhancer protein isl-2a [Danio rerio]
gi|1708561|sp|P53406.1|ISL2A_DANRE RecName: Full=Insulin gene enhancer protein isl-2a; Short=Islet-2A;
AltName: Full=Insulin gene enhancer protein isl-2;
Short=Islet-2
gi|871001|emb|CAA61283.1| Islet-2 protein [Danio rerio]
gi|1037166|dbj|BAA07484.1| zfIsl-2 [Danio rerio]
gi|190336908|gb|AAI62631.1| Islet2a [Danio rerio]
gi|190339440|gb|AAI62833.1| Islet2a [Danio rerio]
Length = 359
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTNLQGLTGTPLVAGSPIRHDTTVQGNPVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|432852914|ref|XP_004067448.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oryzias
latipes]
Length = 284
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 106/127 (83%), Gaps = 1/127 (0%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 137 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 196
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + N +EV +YQPPWKALSDFA
Sbjct: 197 SILMK-QLQQQQHSDKTNLQGLTGTPLVAGSPIRHESTVQGNPVEVQTYQPPWKALSDFA 255
Query: 201 LHTDLDR 207
L +DLD+
Sbjct: 256 LQSDLDQ 262
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 121/177 (68%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N++EV SYQPPWK LSDFA
Sbjct: 240 SILMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANSVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 214 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 273
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 274 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 332
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 333 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 378
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 166 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 225
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 226 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 284
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 285 LQSDLDQ-----PAFQQLVS 299
>gi|432861700|ref|XP_004069695.1| PREDICTED: insulin gene enhancer protein isl-2a-like [Oryzias
latipes]
Length = 358
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 189 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 248
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK Q+QQ++ K + G P+VA SP+RHD+ + N +EV +YQ PWK LSD A
Sbjct: 249 SILMK-QIQQQQHNDKTNLQGLTGTPLVAGSPIRHDTTVQGNPVEVQTYQTPWKTLSDLA 307
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L TDLD+ FQHLVS
Sbjct: 308 LETDLDQ-----PAFQHLVS 322
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 171 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 230
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 231 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 289
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 290 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 335
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 114/152 (75%), Gaps = 8/152 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLV--SQMHGYELGHG 230
L +D+D+ FQ LV SQ++ E G G
Sbjct: 299 LQSDIDQ-----PAFQQLVIYSQVNFSEGGPG 325
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 111/142 (78%), Gaps = 6/142 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL EMT LSPRVI VWFQNKRCKDKKR
Sbjct: 198 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRVIGVWFQNKRCKDKKR 257
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++A+KQ +Q+ +G + G+PMVASSPVRH+S + N +EVTSYQPPWKALS+FA
Sbjct: 258 SIALKQMQEQQHKNGTLGR-PLSGVPMVASSPVRHESNLQPNPVEVTSYQPPWKALSEFA 316
Query: 201 LHTDLDRLDPSAAPFQHLVSQM 222
++LD+ PF L M
Sbjct: 317 TQSELDQ-----PPFHQLEHAM 333
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|344240688|gb|EGV96791.1| Insulin gene enhancer protein ISL-1 [Cricetulus griseus]
Length = 257
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 109/144 (75%), Gaps = 6/144 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 88 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 147
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 148 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 206
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHG 224
L +D+D+ FQ LV+ G
Sbjct: 207 LQSDIDQ-----PAFQQLVNFSEG 225
>gi|281349042|gb|EFB24626.1| hypothetical protein PANDA_015045 [Ailuropoda melanoleuca]
Length = 329
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 167 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 226
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 227 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 285
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 286 LQSDLDQ-----PAFQQLVS 300
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 177 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 236
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 237 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 295
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 296 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 341
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|126272190|ref|XP_001362509.1| PREDICTED: insulin gene enhancer protein ISL-2 [Monodelphis
domestica]
Length = 359
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|344247658|gb|EGW03762.1| Insulin gene enhancer protein ISL-2 [Cricetulus griseus]
Length = 200
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 31 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 90
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 91 SILMK-QLQQQQHSDKASLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 149
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 150 LQSDLDQ-----PAFQQLVS 164
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri boliviensis
boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|297294254|ref|XP_001094225.2| PREDICTED: insulin gene enhancer protein ISL-1-like [Macaca
mulatta]
Length = 286
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 117 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 176
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 177 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 235
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 236 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 281
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature: LIM2,
bp 517 .. 669; amino acid feature: homeodomain, bp 820
.. 999 [Gallus gallus]
Length = 349
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|444725137|gb|ELW65716.1| Insulin enhancer protein ISL-1 [Tupaia chinensis]
Length = 308
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/147 (66%), Positives = 110/147 (74%), Gaps = 6/147 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 136 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 195
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 196 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 254
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYEL 227
L +D+D+ FQ L ++ EL
Sbjct: 255 LQSDIDQ-----PAFQQLTMILNSVEL 276
>gi|1708558|sp|P50212.1|ISL2B_ONCTS RecName: Full=Insulin gene enhancer protein ISL-2B; Short=Islet-2B
gi|64209|emb|CAA46102.1| isl-1 [Oncorhynchus tshawytscha]
gi|1094403|prf||2106150A LIM domain homeobox protein
Length = 340
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 171 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 230
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+ MK QLQQ+ K + G PMVA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 231 TIFMK-QLQQQHHIDKTNLQGLTGTPMVAGSPIRHDNTVLGNPVEVQTYQPPWKALSEFA 289
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ F+ LVS
Sbjct: 290 LQSDLDQ-----PAFRQLVS 304
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 250 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 309 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 354
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 213 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 272
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 273 SIMMK-QLQQQQPNDKTNIQGMAGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 331
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 332 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 377
>gi|296194639|ref|XP_002745038.1| PREDICTED: insulin gene enhancer protein ISL-1 [Callithrix jacchus]
Length = 348
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 179 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 238
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 239 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 297
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 298 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 343
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 371 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 430
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 431 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 489
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 490 LQSDLDQ-----PAFQQLVS 504
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur garnettii]
Length = 359
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|348555669|ref|XP_003463646.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cavia
porcellus]
Length = 371
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RHDS + +A+EV ++QPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHDSAVQGSAVEVQTFQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G PMVASSP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGLTGTPMVASSPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|344284256|ref|XP_003413884.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein
ISL-2-like [Loxodonta africana]
Length = 356
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 187 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 246
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 247 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 305
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 306 LQSDLDQ-----PAFQQLVS 320
>gi|332252658|ref|XP_003275471.1| PREDICTED: insulin gene enhancer protein ISL-2 [Nomascus
leucogenys]
Length = 222
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 112/143 (78%), Gaps = 6/143 (4%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G + TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKD
Sbjct: 50 GGIQTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKD 109
Query: 138 KKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALS 197
KK+++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS
Sbjct: 110 KKKSILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALS 168
Query: 198 DFALHTDLDRLDPSAAPFQHLVS 220
+FAL +DLD+ FQ LVS
Sbjct: 169 EFALQSDLDQ-----PAFQQLVS 186
>gi|291410745|ref|XP_002721643.1| PREDICTED: ISL LIM homeobox 2 [Oryctolagus cuniculus]
Length = 359
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|410960782|ref|XP_003986966.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Felis catus]
Length = 354
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 185 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 244
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 245 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 303
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 304 LQSDLDQ-----PAFQQLVS 318
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKASLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKASLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 108/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 177 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 236
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 237 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 295
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +D+D+ FQ LV+
Sbjct: 296 LQSDIDQ-----PAFQQLVN 310
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 250
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 251 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 310 LQSDLDQ-----PAFQQLVS 324
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix jacchus]
Length = 359
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|397496393|ref|XP_003819022.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Pan paniscus]
Length = 357
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 188 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 247
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 248 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 306
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 307 LQSDLDQ-----PAFQQLVS 321
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|402874959|ref|XP_003901290.1| PREDICTED: insulin gene enhancer protein ISL-2 [Papio anubis]
Length = 350
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 181 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 240
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 241 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 299
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 300 LQSDLDQ-----PAFQQLVS 314
>gi|355778207|gb|EHH63243.1| Insulin gene enhancer protein ISL-2 [Macaca fascicularis]
Length = 294
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 125 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 184
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 185 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 243
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 244 LQSDLDQ-----PAFQQLVS 258
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 250
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 251 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 310 LQSDLDQ-----PAFQQLVS 324
>gi|355692896|gb|EHH27499.1| Insulin gene enhancer protein ISL-2 [Macaca mulatta]
Length = 310
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 141 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 200
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 201 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 259
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 260 LQSDLDQ-----PAFQQLVS 274
>gi|354471494|ref|XP_003497977.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Cricetulus
griseus]
Length = 391
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 222 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 281
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 282 SILMK-QLQQQQHSDKASLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 340
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 341 LQSDLDQ-----PAFQQLVS 355
>gi|345794823|ref|XP_544791.3| PREDICTED: uncharacterized protein LOC487667 [Canis lupus
familiaris]
Length = 387
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 106/127 (83%), Gaps = 1/127 (0%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 124 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 183
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 184 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 242
Query: 201 LHTDLDR 207
L +DLD+
Sbjct: 243 LQSDLDQ 249
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 123/183 (67%), Gaps = 19/183 (10%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQ------GIPMVASSPVRHDSPIGMNALEVTSYQPPWK 194
++ MKQ QQ+ + + + +Q G PMVA+SP RHD + N +EV SYQPPWK
Sbjct: 240 SILMKQLQQQQPNDKTFLWDYLQNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWK 299
Query: 195 ALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDS 252
LSDFAL +++D+ FQ LV+ G P + G M+ PD+ +S
Sbjct: 300 VLSDFALQSEIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNS 348
Query: 253 YVT 255
V+
Sbjct: 349 MVS 351
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 192 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 251
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+ MK QLQQ++ K + G P+VA SP+RH+S + A+EV +YQPPWKALS+FA
Sbjct: 252 TILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVHGAAVEVQTYQPPWKALSEFA 310
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DL++ FQ LVS
Sbjct: 311 LQSDLEQ-----PAFQQLVS 325
>gi|410908008|ref|XP_003967483.1| PREDICTED: insulin gene enhancer protein ISL-2A-like [Takifugu
rubripes]
Length = 359
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 111/148 (75%), Gaps = 6/148 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TR+RTVL EKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRV+RVWFQNKRCKDKKR
Sbjct: 190 KTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G MVA SP+RH++ + N +EV +YQPPWK+LSDFA
Sbjct: 250 SILMK-QLQQQQHSDKTNLQGLTGTAMVAGSPIRHENTVQGNPVEVQTYQPPWKSLSDFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELG 228
L +DL++ FQ LVS LG
Sbjct: 309 LQSDLEQ-----PAFQQLVSFSESGSLG 331
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + + G P+VA SP+ H++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKASFQGLTGTPLVAGSPIGHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKE LVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEHLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 119/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRT Y ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTWYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 125/180 (69%), Gaps = 15/180 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 212 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTQLSPRVIRVWFQNKRCKDKKR 271
Query: 141 ALAMKQQLQQE--KDGRKMGYGSMQGIPMVASSPVRHDSPIGMNA-LEVTSY-QPPWKAL 196
+ MKQ Q+ KD + S G+PMVASSPVRHDS + + +EV SY QPPWKAL
Sbjct: 272 TVLMKQIADQQASKDPNRR-VQSFNGVPMVASSPVRHDSQMPQGSQVEVQSYQQPPWKAL 330
Query: 197 SDFALHTDLDRLDPSAAPFQHLVS----QMHGYELGHGPPPPHDMGPTPGDMAHPDSTDS 252
SDFAL +D+++ PFQ LV+ + L PP D P G M+ P + DS
Sbjct: 331 SDFALQSDIEQ-----PPFQQLVNFSEQSLGQTTLVKDIPPRDDAAPGSG-MSLPPTPDS 384
>gi|260447067|ref|NP_001159513.1| ISL LIM homeobox 2 [Xenopus (Silurana) tropicalis]
gi|257043811|gb|ACV33233.1| islet 2 [Xenopus (Silurana) tropicalis]
Length = 333
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 164 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 223
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MKQ QQ+ + K + G PMVA SP+RHDS + +A+EV +YQPPWKALSDFA
Sbjct: 224 SILMKQLQQQQLND-KTSLQGLTGTPMVAGSPIRHDSAVQGSAVEVQTYQPPWKALSDFA 282
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 283 LQSDLDQ-----PAFQQLVS 297
>gi|259013450|ref|NP_001158468.1| ISL LIM homeobox 1 [Saccoglossus kowalevskii]
gi|197320557|gb|ACH68440.1| islet homeobox protein [Saccoglossus kowalevskii]
Length = 383
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 124/183 (67%), Gaps = 17/183 (9%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL EMTNLSPRVIRVWFQNKRCKDKKR
Sbjct: 183 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTNLSPRVIRVWFQNKRCKDKKR 242
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQ---PPWKALS 197
+ AMK +Q+++ QG+PMVASSPVRH+ + N +EVTSYQ P W+ALS
Sbjct: 243 SQAMKLMQEQQQNKNNQRVQGFQGVPMVASSPVRHEGNMQANPVEVTSYQQQPPAWQALS 302
Query: 198 DFALHTDLDRLDPSAAPFQHLVS------QMHGYELGHGPPPPHDMGPTPGDMAHPDSTD 251
DFAL +D+++ FQ LV+ Q +E PPP + G+ P ST+
Sbjct: 303 DFALKSDIEQ-----PAFQQLVNFSEQNPQGPNHENTLTPPPEDSLSSHGGE---PPSTN 354
Query: 252 SYV 254
+
Sbjct: 355 CFC 357
>gi|18858909|ref|NP_571039.1| insulin gene enhancer protein isl-2b [Danio rerio]
gi|1708564|sp|P53407.1|ISL2B_DANRE RecName: Full=Insulin gene enhancer protein isl-2b; Short=Islet-2B;
AltName: Full=Insulin gene enhancer protein isl-3;
Short=Islet-3
gi|1037168|dbj|BAA07485.1| zfIsl-3 [Danio rerio]
gi|55962547|emb|CAI11499.1| islet 3 [Danio rerio]
gi|63100507|gb|AAH95011.1| Islet2b [Danio rerio]
Length = 358
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 7/140 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MKQ QQ G K M G +VA SP+RH+ + + ++V +YQPPWKALS+FA
Sbjct: 250 SILMKQLQQQH--GDKTNLQGMTGTALVAGSPIRHNPSVPGHPVDVQAYQPPWKALSEFA 307
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 308 LQSDLDQ-----PAFQQLVS 322
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Ovis aries]
Length = 366
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 111/147 (75%), Gaps = 13/147 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMN-------ALEVTSYQPPW 193
++ MK QLQQ++ K + G P+VA SP+RH+S + + A+EV +YQPPW
Sbjct: 250 SILMK-QLQQQQHNDKTSLQGLTGTPLVAGSPIRHESAVQGSESAVQGGAVEVQTYQPPW 308
Query: 194 KALSDFALHTDLDRLDPSAAPFQHLVS 220
KALS+FAL +DLD+ FQ LVS
Sbjct: 309 KALSEFALQSDLDQ-----PAFQQLVS 330
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 110/148 (74%), Gaps = 11/148 (7%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDK
Sbjct: 222 DPKTTRVRTVLNEKQLHTLRTCYGANPRPDALMKEQLVEMTALSPRVIRVWFQNKRCKDK 281
Query: 139 KRALAMKQQLQQEKDGR-----KMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY-QPP 192
KRA+AMKQ Q ++ G M G+PMVAS PVR+D+ + + +EV +Y QP
Sbjct: 282 KRAIAMKQMQDQHQNSHLHQDGDQGLSGMHGVPMVASEPVRNDNAVNIKPVEVRNYQQPA 341
Query: 193 WKALSDFALHTDLDRLDPSAAPFQHLVS 220
WKALSDFAL +++++ FQ LVS
Sbjct: 342 WKALSDFALQSEIEQ-----PAFQQLVS 364
>gi|324120795|dbj|BAJ78787.1| Islet homologue protein [Lethenteron camtschaticum]
Length = 284
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 119/176 (67%), Gaps = 10/176 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQL TLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 113 KATRVRTVLNEKQLQTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 172
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQP-PWKALSDF 199
++ MK Q+QQ+ K + G P+VA SPV H+S I N +EV S+QP PWK LS+F
Sbjct: 173 SILMK-QMQQQHHADKTNLQGLTGTPLVAGSPVPHESAIPGNPVEVQSFQPAPWKTLSEF 231
Query: 200 ALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAHPDSTDSYVT 255
AL +DLD+ PFQHL+ G G D+G P + PD+ S V
Sbjct: 232 ALSSDLDQ-----GPFQHLMGFSDGGP-GSNSTAGSDLGSIPSQL--PDTPSSMVA 279
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid feature:
LIM1, bp 155 .. 307; amino acid feature: LIM2, bp 341 ..
493 [Rattus norvegicus]
Length = 360
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 108/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 250
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G +VA SP H++ + +A+EV +YQPPWKALS+FA
Sbjct: 251 SILMK-QLQQQQHSDKASLQGLTGTLLVAGSPSAHENAVQGSAVEVQTYQPPWKALSEFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 310 LQSDLDQ-----PAFQQLVS 324
>gi|47225812|emb|CAF98292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 110/148 (74%), Gaps = 5/148 (3%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TR+RTVL EKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRV+RVWFQNKRCKDKKR
Sbjct: 190 KTTRIRTVLTEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVVRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MKQ QQ++ K + G MVA SP+RH++ + N +EV +YQPPWK+LSDFA
Sbjct: 250 SIMMKQLQQQQQHSDKTNLQGLTGTAMVAGSPIRHENTVQGNPVEVQTYQPPWKSLSDFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELG 228
L +DL++ FQ LVS LG
Sbjct: 310 LQSDLEQ-----PAFQQLVSFSESGSLG 332
>gi|348500124|ref|XP_003437623.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Oreochromis
niloticus]
Length = 360
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 250
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MKQ QQ++ + G + G P+VA SP+RH+ + N +EV +YQPPWKALS+FA
Sbjct: 251 SILMKQLQQQQQSDKTSLQG-LTGTPLVAGSPIRHEGNVQGNPVEVQTYQPPWKALSEFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 310 LQSDLDQ-----PAFQQLVS 324
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 123/183 (67%), Gaps = 15/183 (8%)
Query: 71 RVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWF 130
R R + K TR+RTVLNEKQLHTLRTCY+ANPRPDALMKEQL EMT LSPRVIRVWF
Sbjct: 204 RARGSRNKETKTTRIRTVLNEKQLHTLRTCYSANPRPDALMKEQLTEMTGLSPRVIRVWF 263
Query: 131 QNKRCKDKKRALAMK--QQLQQEKDGRKMGYG-SMQGIPMVASSPVRHDSPIGM--NALE 185
QNKRCKDKK+++ MK QQ QQEK YG +GIPMVASSPVRH+ P M +E
Sbjct: 264 QNKRCKDKKKSILMKQMQQQQQEKGVCMSDYGIDGRGIPMVASSPVRHEPPQSMQPTPVE 323
Query: 186 VTSYQPPWKALSDFALHTDLDRLDPSAAPFQHLV-----SQMHGYELGHGPPPPHDMGPT 240
V YQ PWKALS+FA+ ++L++ PFQ LV S+M PPP H PT
Sbjct: 324 VQHYQAPWKALSEFAMQSELEQ-----PPFQQLVRPFFYSRMRTQPAVISPPPMHSFDPT 378
Query: 241 PGD 243
D
Sbjct: 379 AHD 381
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 119/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+ MKQ QQ+ K M G PMVA+SP RHD I N +EV SYQPPWK LSDFA
Sbjct: 240 SQLMKQLQQQQSSD-KTNIQGMTGTPMVAASPERHDGGIQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LVS G P + G M+ PD+ +S V+
Sbjct: 299 LQSDIDQ-----PAFQQLVS------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVS 344
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 121/184 (65%), Gaps = 20/184 (10%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYG-------SMQGIPMVASSPVRHDSPIGMNALEVTSYQPPW 193
+ MKQ QQ+ + +G M G PMVA+SP RHD I N +EV SYQPPW
Sbjct: 240 SQLMKQLQQQQSSDKTVGCCRFLQNIQGMTGTPMVAASPERHDGGIQANPVEVQSYQPPW 299
Query: 194 KALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTD 251
K LSDFAL +D+D+ FQ LVS G P + G M+ PD+ +
Sbjct: 300 KVLSDFALQSDIDQ-----PAFQQLVS------FSEGGPGSNSTGSEVASMSSQLPDTPN 348
Query: 252 SYVT 255
S V+
Sbjct: 349 SMVS 352
>gi|410912158|ref|XP_003969557.1| PREDICTED: insulin gene enhancer protein ISL-3-like [Takifugu
rubripes]
Length = 359
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 108/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
A MKQ QQ+ K + G P+VA SP+RH+S + N +EV +YQPPWKALS+FA
Sbjct: 250 AQLMKQLQQQQHSD-KTNLQGLTGTPLVAGSPIRHESAVQGNPVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 117/177 (66%), Gaps = 9/177 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ +KQ QQ+ + K M G PMVASSP RHD + N +EV +YQPPWK LSDFA
Sbjct: 240 SILIKQLQQQQPND-KTNIQGMTGTPMVASSPERHDGGLQANPVEVQTYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ L G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLTC-FSQVNFSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 349
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 112/159 (70%), Gaps = 26/159 (16%)
Query: 74 KVSGGDG-KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+V DG KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQN
Sbjct: 183 QVHKQDGHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQN 242
Query: 133 KRCKDKKRALAMKQQLQQEKDGRKM----------------------GYGSMQGIPMVAS 170
KRCKDKK+++ MK Q+Q++ + + G G + G+PMVA
Sbjct: 243 KRCKDKKKSILMK-QMQEQASKQDLSSDSIVWDTLPDDMTASPNGMSGIGRLNGVPMVAQ 301
Query: 171 SPVRHDSPIGMNALEVTSYQ--PPWKALSDFALHTDLDR 207
PVRH+S + N +EV SYQ PPWKALSDFAL +D+++
Sbjct: 302 EPVRHESQMQANPVEVQSYQQPPPWKALSDFALQSDIEQ 340
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma floridae]
Length = 419
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 112/159 (70%), Gaps = 26/159 (16%)
Query: 74 KVSGGDG-KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+V DG KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQN
Sbjct: 172 QVHKQDGHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQN 231
Query: 133 KRCKDKKRALAMKQQLQQEKDGRKM----------------------GYGSMQGIPMVAS 170
KRCKDKK+++ MK Q+Q++ + + G G + G+PMVA
Sbjct: 232 KRCKDKKKSILMK-QMQEQASKQDLSSDSIVWDTLPDDMTASPNGMSGIGRLNGVPMVAQ 290
Query: 171 SPVRHDSPIGMNALEVTSYQ--PPWKALSDFALHTDLDR 207
PVRH+S + N +EV SYQ PPWKALSDFAL +D+++
Sbjct: 291 EPVRHESQMQANPVEVQSYQQPPPWKALSDFALQSDIEQ 329
>gi|444730284|gb|ELW70671.1| Insulin enhancer protein ISL-2 [Tupaia chinensis]
Length = 577
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 103/127 (81%), Gaps = 7/127 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 163 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 222
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + P +SP+RH+S + +A+EV +YQPPWKALS+FA
Sbjct: 223 SILMK-QLQQQQHNDKTPH------PRGPASPIRHESAVQGSAVEVQTYQPPWKALSEFA 275
Query: 201 LHTDLDR 207
L +DLD+
Sbjct: 276 LQSDLDQ 282
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 106/153 (69%), Gaps = 14/153 (9%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D K TRVRTVLNEKQLHTLRTCY AN RPDALMKEQL EMT LS RVIRVWFQNKRCKDK
Sbjct: 211 DAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIRVWFQNKRCKDK 270
Query: 139 KRALAMKQQL--------QQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY- 189
KR++A+KQ E+ G M G+PMVAS PVR+D+ + + +EV +Y
Sbjct: 271 KRSIALKQIQEQQAKQQHNNEQGNNVQGLSGMNGVPMVASEPVRNDNSVSVAPVEVRNYQ 330
Query: 190 QPPWKALSDFALHTDLDRLDPSAAPFQHLVSQM 222
QP WKALSDFAL +++++ FQ L++
Sbjct: 331 QPAWKALSDFALQSEIEQ-----PAFQQLMNNF 358
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 42/55 (76%), Gaps = 5/55 (9%)
Query: 18 SGKVSGG-----DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
SG SGG D K TRVRTVLNEKQLHTLRTCY AN RPDALMKEQL EMT L
Sbjct: 199 SGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGL 253
>gi|395735796|ref|XP_003776642.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-1
[Pongo abelii]
Length = 382
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 100/145 (68%), Gaps = 6/145 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPR-PDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K TRVRTVLNEKQLHTLRTCY + R PDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK
Sbjct: 192 KTTRVRTVLNEKQLHTLRTCYASKTRGPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKK 251
Query: 140 RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDF 199
R++ MK K M G PMVA+SP RHD + N +EV SYQPPWK+ DF
Sbjct: 252 RSIMMKATPAAAAPMNKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKSTGDF 311
Query: 200 ALHTDLDRLDPSAAPFQHLVSQMHG 224
AL +D+D+ FQ LV+ G
Sbjct: 312 ALQSDIDQ-----PAFQQLVNFSEG 331
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 106/153 (69%), Gaps = 14/153 (9%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D K TRVRTVLNEKQLHTLRTCY AN RPDALMKEQL EMT LS RVIRVWFQNKRCKDK
Sbjct: 190 DAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTEMTGLSSRVIRVWFQNKRCKDK 249
Query: 139 KRALAMKQQL--------QQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY- 189
KR++A+KQ E+ G M G+PMVAS PVR+D+ + + +EV +Y
Sbjct: 250 KRSIALKQIQEQQAKQQHNNEQGNNVQGLSGMNGVPMVASEPVRNDNSVSVAPVEVRNYQ 309
Query: 190 QPPWKALSDFALHTDLDRLDPSAAPFQHLVSQM 222
QP WKALSDFAL +++++ FQ L++
Sbjct: 310 QPAWKALSDFALQSEIEQ-----PAFQQLMNNF 337
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 45/64 (70%), Gaps = 5/64 (7%)
Query: 9 GGIVSRTSSSGKVSGG-----DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE 63
GG + SG SGG D K TRVRTVLNEKQLHTLRTCY AN RPDALMKEQL E
Sbjct: 169 GGERVISHRSGGHSGGQRRSKDAKTTRVRTVLNEKQLHTLRTCYAANCRPDALMKEQLTE 228
Query: 64 MTNL 67
MT L
Sbjct: 229 MTGL 232
>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
Length = 517
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/160 (58%), Positives = 110/160 (68%), Gaps = 10/160 (6%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 305 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 364
Query: 141 ALAMKQQLQQEKDGRKMGYGS-MQGIPMVASSPVRHDSPIGM-NALEVTSYQPPWKALS- 197
+ +KQ Q ++ G G +QG+PMVA SP+R++ PI N LE+ PW +
Sbjct: 365 QIMVKQMDQHQQVG---GIDCPLQGVPMVAGSPMRNEPPISCANPLEIQQIPGPWGSEEF 421
Query: 198 --DFALHTDLDRLDPSAAPFQHLVSQMHGYEL-GHGPPPP 234
+F+ H D+ R + SA FQ L+S H G PPPP
Sbjct: 422 GPNFS-HGDISRSNDSAPAFQQLISAYHHLSRNGPCPPPP 460
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 93/166 (56%), Positives = 108/166 (65%), Gaps = 18/166 (10%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 1553 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 1612
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGI-PMVASSPVRHDSPIGMNALEVTSYQ--PPW---- 193
L MKQ QQ + + MQG+ P++ASSP RHD P+ ++A+EV YQ W
Sbjct: 1613 QLIMKQIQQQHVKNQTLNGIRMQGVGPLIASSPSRHDVPL-ISAIEVQQYQQNAVWMKSA 1671
Query: 194 -KALSDF--ALHTDLDRLDP----SAAPFQHLVSQMHGYELGHGPP 232
+ + D+ A+ DL S PFQ L MH + PP
Sbjct: 1672 GRTMHDYQPAMPDDLPTTSAVGQDSQTPFQQL---MHDFGDSSIPP 1714
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 107/177 (60%), Gaps = 37/177 (20%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTA-----------------------NPVEVQSYQPPWKVLSDFA 275
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 276 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 321
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 106/177 (59%), Gaps = 37/177 (20%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRT Y ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTRYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTA-----------------------NPVEVQSYQPPWKVLSDFA 275
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 276 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 321
>gi|61200414|gb|AAX39779.1| ISL1 transcription factor, partial [Ovis aries]
Length = 243
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 138 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 197
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV
Sbjct: 198 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEV 242
>gi|358254958|dbj|GAA56650.1| insulin gene enhancer protein isl-2b [Clonorchis sinensis]
Length = 712
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 9/122 (7%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT+LSPRVIRVWFQNKRCKDK
Sbjct: 305 DQKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDK 364
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHD-----SPIGMNALEVTSYQPPW 193
KR + +KQ Q +++G + G+ + GI M+ASSPVR+D S G++ +V P W
Sbjct: 365 KRQILLKQMEQHQQNGGRPGH--LHGISMIASSPVRNDPNMLCSSTGIDVQQV--LGPYW 420
Query: 194 KA 195
K+
Sbjct: 421 KS 422
>gi|256077688|ref|XP_002575133.1| insulinprotein enhancer protein isl [Schistosoma mansoni]
gi|353229553|emb|CCD75724.1| putative insulinprotein enhancer protein isl [Schistosoma mansoni]
Length = 409
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT+LSPRVIRVWFQNKRCKDK
Sbjct: 137 DQKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDK 196
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHD 176
KR L +KQ Q +++G + GS+ GI ++A SPVR+D
Sbjct: 197 KRQLLLKQMEQHQQNGGR--PGSLHGISLIAQSPVRND 232
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 98/158 (62%), Gaps = 13/158 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+PTRVRTVLNEKQLHTLRTCYNANPRPDA+MKEQLVEMT LSPRVIRVWFQNKRCKDKK
Sbjct: 179 RPTRVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIRVWFQNKRCKDKK- 237
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
K G Q +P ++ P + + +A+ S PWKAL+DFA
Sbjct: 238 ----KNPNSLSPTGAPPRTLPQQTLPAISGVPYGNSGSMRPDAMSDMSGYQPWKALNDFA 293
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMG 238
+H+++D+ FQ LV H E G PP G
Sbjct: 294 MHSEMDQ-----GAFQQLV---HFSEQAPGSLPPSSDG 323
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVAS 170
++ MK QLQQ++ K M G PMVAS
Sbjct: 240 SILMK-QLQQQQPNDKTNIQGMTGTPMVAS 268
>gi|393908929|gb|EJD75252.1| transcription factor protein [Loa loa]
Length = 594
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 113/188 (60%), Gaps = 11/188 (5%)
Query: 59 EQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEM 118
+++V N +++K + D + TRVRTVLNEKQL TL+ CY AN RPDA+MKE LVEM
Sbjct: 362 DEIVTTFNTSKSQIKK-NKKDKQSTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEM 420
Query: 119 TNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGI-PMVASSPVRHDS 177
T LSPRVIRVWFQNKRCKDKKR +AMK Q+ + R + + G+ P++A+SP H
Sbjct: 421 TGLSPRVIRVWFQNKRCKDKKRQIAMKHLQQKAETERAITGVRLGGVGPLIATSPTPHSD 480
Query: 178 P--IGMNALEVTSY-QPP--WKALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPP 232
P IG+ +++ + Q P W + A++ P A Q + Q Y PP
Sbjct: 481 PNLIGIQPVDIHQFPQNPNIWSGME--AMNAQGGMQQPQHAALQSTLQQPSPYAQIMPPP 538
Query: 233 PPH--DMG 238
PPH D+G
Sbjct: 539 PPHYADLG 546
>gi|322789291|gb|EFZ14611.1| hypothetical protein SINV_09376 [Solenopsis invicta]
Length = 113
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 68/71 (95%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 33 KPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 92
Query: 141 ALAMKQQLQQE 151
+AMKQQ+Q++
Sbjct: 93 TIAMKQQMQEK 103
>gi|47217860|emb|CAG02353.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 80/99 (80%), Gaps = 1/99 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 39 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 98
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPI 179
A MKQ QQ+ K + G P+VA SP+RH+S +
Sbjct: 99 AQLMKQLQQQQHSD-KTNLQGLTGTPLVAGSPIRHESAV 136
>gi|324509239|gb|ADY43889.1| Insulin enhancer protein isl-2b [Ascaris suum]
Length = 427
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 11/136 (8%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + TRVRTVLNEKQL TL+TCY AN RPDALMKEQLVEMT LS RVIRVWFQNKRCKDK
Sbjct: 228 DKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIRVWFQNKRCKDK 287
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGI-PMVASSPVRHDSP--IGMNALEVTSY-QPPWK 194
KR +AMK Q+ + R + + G+ P++A+SP H P G+ +++ Y Q P
Sbjct: 288 KRQIAMKHMQQKAETERAITGVRVSGVGPLIAASPTTHHDPNLAGIQPVDIHQYAQNP-- 345
Query: 195 ALSDFALHTDLDRLDP 210
AL +D +DP
Sbjct: 346 -----ALWASVDPMDP 356
>gi|324508533|gb|ADY43602.1| Insulin gene enhancer protein isl-2b [Ascaris suum]
Length = 452
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 11/136 (8%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + TRVRTVLNEKQL TL+TCY AN RPDALMKEQLVEMT LS RVIRVWFQNKRCKDK
Sbjct: 228 DKQTTRVRTVLNEKQLMTLKTCYAANARPDALMKEQLVEMTGLSARVIRVWFQNKRCKDK 287
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGI-PMVASSPVRHDSP--IGMNALEVTSY-QPPWK 194
KR +AMK Q+ + R + + G+ P++A+SP H P G+ +++ Y Q P
Sbjct: 288 KRQIAMKHMQQKAETERAITGVRVSGVGPLIAASPTTHHDPNLAGIQPVDIHQYAQNP-- 345
Query: 195 ALSDFALHTDLDRLDP 210
AL +D +DP
Sbjct: 346 -----ALWASVDPMDP 356
>gi|56694840|gb|AAW23082.1| Islet [Oikopleura dioica]
Length = 381
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 86/117 (73%), Gaps = 8/117 (6%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 184 KTTRVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 243
Query: 141 ALAMKQQLQQEKDGRKMG------YGSMQGIPMVASSPVRHDSPIGMNA-LEVTSYQ 190
+ +K QL+ +++ + G S + + +VA+ PV + ++ +E+ SYQ
Sbjct: 244 QIMIK-QLEDQRNSQDSGTDETKSIASCKAVSLVATDPVPDNPQQKLDTEIEIKSYQ 299
>gi|289541370|gb|ADD09808.1| LIM-homeodomain transcription factor islet protein [Branchiostoma
belcheri]
Length = 250
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/78 (82%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Query: 74 KVSGGDG-KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+V DG KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQN
Sbjct: 134 QVHKQDGHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQN 193
Query: 133 KRCKDKKRALAMKQQLQQ 150
KRCKDKK+++ MKQ +Q
Sbjct: 194 KRCKDKKKSILMKQMQEQ 211
>gi|313233722|emb|CBY09892.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 84/114 (73%), Gaps = 8/114 (7%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
RVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+ +
Sbjct: 209 RVRTVLNEKQLHTLRTCYQANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKQIM 268
Query: 144 MKQQLQQEKDGRKMG------YGSMQGIPMVASSPVRHDSPIGMNA-LEVTSYQ 190
+K QL+ +++ + G S + + +VA+ PV + ++ +E+ SYQ
Sbjct: 269 IK-QLEDQRNSQDSGTDETKSIASCKAVSLVATDPVPDNPQQKLDTEIEIKSYQ 321
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 65/71 (91%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQE 151
++ MKQ QQ+
Sbjct: 240 SILMKQLQQQQ 250
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 68/79 (86%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 193 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 252
Query: 141 ALAMKQQLQQEKDGRKMGY 159
++ MKQ QQ+ + + +
Sbjct: 253 SILMKQLQQQQHSDKTVSF 271
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 14/124 (11%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ TRVRTVL+E QL L+TCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 171 RATRVRTVLSETQLCMLQTCYTANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 230
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+L M+ Q++ +G + P++ S DS + ++ PPWK L+DF
Sbjct: 231 SLTMRHT-QKQLEGHLVSEE-----PLLLVSTESQDSDVMIS--------PPWKLLTDFI 276
Query: 201 LHTD 204
L +
Sbjct: 277 LQNE 280
>gi|157830485|pdb|1BW5|A Chain A, The Nmr Solution Structure Of The Homeodomain Of The Rat
Insulin Gene Enhancer Protein Isl-1, 50 Structures
Length = 66
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/65 (90%), Positives = 61/65 (93%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 61
Query: 141 ALAMK 145
++ MK
Sbjct: 62 SIMMK 66
>gi|78190375|gb|ABB29578.1| ISL-LIM class homeobox protein [Nematostella vectensis]
gi|110339149|gb|ABG67838.1| ISL, partial [Nematostella vectensis]
Length = 60
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/60 (95%), Positives = 59/60 (98%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
PTRVRTVLNEKQLHTLRTCYNANPRPDA+MKEQLVEMT LSPRVIRVWFQNKRCKDKK+A
Sbjct: 1 PTRVRTVLNEKQLHTLRTCYNANPRPDAMMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKA 60
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/61 (93%), Positives = 59/61 (96%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 239
Query: 141 A 141
+
Sbjct: 240 S 240
>gi|402593440|gb|EJW87367.1| homeobox domain-containing protein [Wuchereria bancrofti]
Length = 197
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 83 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRAL 142
TRVRTVLNEKQL TL+ CY AN RPDA+MKE LVEMT LSPRVIRVWFQNKRCKDKKR +
Sbjct: 122 TRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKRQI 181
Query: 143 AMKQQLQQE 151
AMK LQQ+
Sbjct: 182 AMK-HLQQK 189
>gi|170592735|ref|XP_001901120.1| Homeobox domain containing protein [Brugia malayi]
gi|158591187|gb|EDP29800.1| Homeobox domain containing protein [Brugia malayi]
Length = 212
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ TRVRTVLNEKQL TL+ CY AN RPDA+MKE LVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 120 ESTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 179
Query: 141 ALAMKQQLQQEKD 153
+AMK LQQ+ +
Sbjct: 180 QIAMK-HLQQKAE 191
>gi|312086430|ref|XP_003145073.1| homeobox domain-containing protein [Loa loa]
Length = 169
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ TRVRTVLNEKQL TL+ CY AN RPDA+MKE LVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 96 ESTRVRTVLNEKQLMTLKACYAANARPDAMMKEHLVEMTGLSPRVIRVWFQNKRCKDKKR 155
Query: 141 ALAMKQQLQQEKD 153
+AMK LQQ+ +
Sbjct: 156 QIAMK-HLQQKAE 167
>gi|190608764|gb|ACE79713.1| LIM-homeodomain transcription factor islet [Branchiostoma
lanceolatum]
Length = 231
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 73/137 (53%), Gaps = 52/137 (37%)
Query: 74 KVSGGDG-KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+V DG KPTRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEM
Sbjct: 54 QVHKQDGHKPTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEM-------------- 99
Query: 133 KRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQ-- 190
VA PVRH+S + N +EV SYQ
Sbjct: 100 -----------------------------------VAQEPVRHESQMQANPVEVQSYQQP 124
Query: 191 PPWKALSDFALHTDLDR 207
PPWKALSDFAL +D+++
Sbjct: 125 PPWKALSDFALQSDIEQ 141
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 57/91 (62%), Gaps = 10/91 (10%)
Query: 5 GSTKGGIVSRTSSSGK-------VSGGDG-KPTRVRTVLNEKQLHTLRTCYNANPRPDAL 56
GST + +R S G+ V DG KPTRVRTVLNEKQLHTLRTCY ANPRPDAL
Sbjct: 32 GSTDLEMATRPESHGRSDQRRPQVHKQDGHKPTRVRTVLNEKQLHTLRTCYAANPRPDAL 91
Query: 57 MKEQLVEMTNLFLGRVRKVSGGDGKPTRVRT 87
MKEQLVEM + VR S P V++
Sbjct: 92 MKEQLVEM--VAQEPVRHESQMQANPVEVQS 120
>gi|196013287|ref|XP_002116505.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
gi|190581096|gb|EDV21175.1| hypothetical protein TRIADDRAFT_30944 [Trichoplax adhaerens]
Length = 265
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TR+RTVLNEKQL TLR+ Y +NPRPD+ +KE+LVE+T L+PRVIRVWFQNKRCKDKK
Sbjct: 182 KGTRIRTVLNEKQLQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIRVWFQNKRCKDKKI 241
Query: 141 ALAMKQQLQQE 151
A +Q L++E
Sbjct: 242 KAAGEQALEEE 252
>gi|268565351|ref|XP_002639418.1| C. briggsae CBR-LIM-7 protein [Caenorhabditis briggsae]
Length = 458
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + TRVRTVLNE+QL L+ CY+ N RPDA +KE+LVEMT L+ RVIRVWFQNKRCKDK
Sbjct: 264 DKQATRVRTVLNEQQLKILKDCYSCNSRPDASLKEKLVEMTGLNARVIRVWFQNKRCKDK 323
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGI-PMVASSPVRH-DSPIGMNALEVTSY 189
KR + + + + + + GI P++ P H D+ +G +++ S+
Sbjct: 324 KRQIQITESRINSEREDVLTRVRINGIGPLMVQPPTPHIDTTLGGGPIDIHSF 376
>gi|188572977|gb|ACD65417.1| Isl1 [Mus musculus]
Length = 95
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 6/97 (6%)
Query: 128 VWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVT 187
+WFQNKRCKDKKR++ MKQ LQQ++ K M G PMVA+SP RHD + N +EV
Sbjct: 1 MWFQNKRCKDKKRSIMMKQ-LQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQ 59
Query: 188 SYQPPWKALSDFALHTDLDRLDPSAAPFQHLVSQMHG 224
SYQPPWK LSDFAL +D+D+ FQ LV+ G
Sbjct: 60 SYQPPWKVLSDFALQSDIDQ-----PAFQQLVNFSEG 91
>gi|356577835|ref|XP_003557027.1| PREDICTED: insulin gene enhancer protein isl-1-like, partial
[Glycine max]
Length = 289
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 53/58 (91%), Gaps = 1/58 (1%)
Query: 71 RVRKVSG-GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
R ++ SG DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIR
Sbjct: 182 REKRPSGPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIR 239
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 2 SESGSTKGGIVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 61
SESGS K R S DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL
Sbjct: 173 SESGSHKSIREKRPSGPS-----DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 227
Query: 62 VEMTNL 67
VEMT L
Sbjct: 228 VEMTGL 233
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 229 HGPPPPHDMGPTPGDMAHPDSTDSYVTYLESDDSLQDNP 267
+GPP + HPDSTDSYVTYLESDDS+Q +P
Sbjct: 251 NGPPGASSLDSGITSHHHPDSTDSYVTYLESDDSMQGSP 289
>gi|17508249|ref|NP_491668.1| Protein LIM-7 [Caenorhabditis elegans]
gi|1658400|gb|AAB18328.1| CeLIM-7, partial [Caenorhabditis elegans]
gi|351020974|emb|CCD62964.1| Protein LIM-7 [Caenorhabditis elegans]
Length = 452
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + TRVRTVLNE QL LR CY+ N RPDA +KE+LVEMT LS RVIRVWFQNKRCKDK
Sbjct: 262 DKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVIRVWFQNKRCKDK 321
Query: 139 KRALAMKQ-QLQQEKD 153
KR + + + +L E++
Sbjct: 322 KRQIQITENRLNSERE 337
>gi|308220144|gb|ADO22644.1| TALE class homeobox transcription factor Isl [Mnemiopsis leidyi]
Length = 236
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S G+ K TRVRTVLN++QL LRTCYN NPRPDALMKEQ+ ++T LS RVIRVWFQNKRC
Sbjct: 68 SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIRVWFQNKRC 127
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 14 RTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
R++++G S G+ K TRVRTVLN++QL LRTCYN NPRPDALMKEQ+ ++T L +R
Sbjct: 62 RSTNTG--SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIR 119
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 51/60 (85%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S G+ K TRVRTVLN++QL LRTCYN NPRPDALMKEQ+ ++T LS RVIRVWFQNKRC
Sbjct: 153 SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGLSARVIRVWFQNKRC 212
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
Query: 14 RTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
R++++G S G+ K TRVRTVLN++QL LRTCYN NPRPDALMKEQ+ ++T L RV
Sbjct: 147 RSTNTG--SSGEQKTTRVRTVLNDRQLRILRTCYNNNPRPDALMKEQMTKLTGL-SARVI 203
Query: 74 KV 75
+V
Sbjct: 204 RV 205
>gi|308461174|ref|XP_003092882.1| CRE-LIM-7 protein [Caenorhabditis remanei]
gi|308252088|gb|EFO96040.1| CRE-LIM-7 protein [Caenorhabditis remanei]
Length = 462
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + TRVRTVLNE+QL L+ CY+ N RPDA +KE+LVEMT L+ RVIRVWFQNKRCKDK
Sbjct: 273 DKQATRVRTVLNEQQLKILKDCYSCNSRPDASLKEKLVEMTGLNARVIRVWFQNKRCKDK 332
Query: 139 KRALAMKQ-QLQQEKD 153
KR + + +L E++
Sbjct: 333 KRQIQISDARLHSERE 348
>gi|440808054|gb|AGC24170.1| islet, partial [Lymnaea stagnalis]
Length = 189
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 51/63 (80%), Gaps = 4/63 (6%)
Query: 70 GRVRKVSGG----DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
GR K S G D K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL EMT LSPRV
Sbjct: 127 GRGEKSSRGSHKSDHKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGLSPRV 186
Query: 126 IRV 128
IRV
Sbjct: 187 IRV 189
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 39/43 (90%)
Query: 25 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL EMT L
Sbjct: 140 DHKTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLTEMTGL 182
>gi|595301|gb|AAA80275.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 46/48 (95%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRV
Sbjct: 120 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 39/41 (95%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT L
Sbjct: 120 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGL 160
>gi|197282004|gb|ACH57181.1| Lim/Isl [Trichoplax adhaerens]
Length = 60
Score = 95.9 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/57 (77%), Positives = 52/57 (91%)
Query: 83 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
TR+RTVLNEKQL TLR+ Y +NPRPD+ +KE+LVE+T L+PRVIRVWFQNKRCKDKK
Sbjct: 2 TRIRTVLNEKQLQTLRSYYASNPRPDSTVKEKLVELTGLNPRVIRVWFQNKRCKDKK 58
>gi|487805|gb|AAA80274.1| LIM domain homeobox protein, partial [Danio rerio]
Length = 167
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 46/48 (95%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRV
Sbjct: 120 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRV 167
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 39/41 (95%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT L
Sbjct: 120 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGL 160
>gi|241688860|ref|XP_002411724.1| insulin protein enhancer isl, putative [Ixodes scapularis]
gi|215504544|gb|EEC14038.1| insulin protein enhancer isl, putative [Ixodes scapularis]
Length = 176
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 153 DGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFALHTDLDRLDPSA 212
DGR + G+++G+PMVASSPVRH+ LEV +YQPPWKAL+++A+H +DPS
Sbjct: 2 DGRPLSLGALRGVPMVASSPVRHEGSASPQPLEVHAYQPPWKALAEYAMHP--QDVDPST 59
Query: 213 APFQHLVSQMHGYELG 228
FQHLV+QMHGY+ G
Sbjct: 60 PHFQHLVNQMHGYDTG 75
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 21/179 (11%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ R RT + KQL TL++ YN++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 197 GESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 256
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP RHD + + L++ L
Sbjct: 257 KRLKKDAGRTRWSQY-------FRSMKG----GSSPGRHDKLLDKDELKIDLDSFSHHDL 305
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG------YELGHGPPPPHDMGPTPGDMAHPDS 249
S+ + T L+ A+P S +HG Y H PPP MGP ++PD+
Sbjct: 306 SNDSYSTSNMGLEDGASPHSGRGSYIHGSGSPPPYLSSHSPPP---MGPGHHYGSYPDN 361
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ R RT + KQL TL++ YN++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 306 GESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 365
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP RHD + + L++ L
Sbjct: 366 KRLKKDAGRTRWSQY-------FRSMKG----TSSPSRHDKLLDKDELKIDLDSFSHHDL 414
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPH--DMGPTPGDMAHP 247
S+ + T L+ A+P S +H G+G PPP+ P P HP
Sbjct: 415 SNDSYSTSNMGLEDGASPHSARGSYIH----GNGSPPPYLSSHSPPPMGSGHP 463
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ R RT + KQL TL++ YN++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 194 GESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 253
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP RHD + + L++ L
Sbjct: 254 KRLKKDAGRTRWSQY-------FRSMKG----GGSPSRHDKLLDKDELKIDLDSFSHHDL 302
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG------YELGHGPPPPHDMGPTPGDMAHPDS 249
S+ + T L+ A+P S +HG Y H PPP MGP ++PD+
Sbjct: 303 SNDSFSTSNMGLEDGASPHSGRGSYIHGNGSPPPYLSSHSPPP---MGPGHHFGSYPDN 358
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 21/179 (11%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ R RT + KQL TL++ YN++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 194 GESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 253
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP RHD + + L++ L
Sbjct: 254 KRLKKDAGRTRWSQY-------FRSMKG----GGSPSRHDKLLDKDELKIDLDSFSHHDL 302
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG------YELGHGPPPPHDMGPTPGDMAHPDS 249
S+ + T L+ A+P S +HG Y H PPP MGP ++PD+
Sbjct: 303 SNDSFSTSNMGLEDGASPHSGRGSYIHGNGSPPPYLSSHSPPP---MGPGHHFGSYPDN 358
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ R RT + KQL TL++ YN++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GESSNKRPRTTITAKQLETLKSAYNSSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP R D + + L++ L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----TSSPSRVDKLLDKDELKIDLDSFSHHDL 280
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPH--DMGPTPGDMAHP 247
S+ + T L+ A+P S +H G+G PPP+ P P HP
Sbjct: 281 SNDSYSTSNMGLEDGASPHSARGSYIH----GNGSPPPYLSSHSPPPMGAGHP 329
>gi|432105544|gb|ELK31741.1| Insulin protein enhancer protein ISL-1 [Myotis davidii]
Length = 199
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Query: 162 MQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFALHTDLDRLDPSAAPFQHLVSQ 221
M G PMVA+SP RHD + N +EV SYQPPWK LSDFAL +D+D+ FQ LV+
Sbjct: 110 MTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFALQSDIDQ-----PAFQQLVN- 163
Query: 222 MHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
G P + G M+ PD+ +S V
Sbjct: 164 -----FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 194
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 162 MQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFALHTDLDRLDPSAAPFQHLVSQ 221
M G PMVA+SP RHD + N +EV SYQPPWK LSDFAL +D+D+ FQ LV+
Sbjct: 304 MTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFALQSDIDQ-----PAFQQLVNF 358
Query: 222 MHG 224
G
Sbjct: 359 SEG 361
>gi|241999336|ref|XP_002434311.1| lhx3, putative [Ixodes scapularis]
gi|215496070|gb|EEC05711.1| lhx3, putative [Ixodes scapularis]
Length = 252
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 28/150 (18%)
Query: 33 TVLNEKQLHTLRTCYNANPRPDALMKE-QLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNE 91
+L ++QL+T Y LM++ +LV + + R +G R RT +
Sbjct: 56 CILCKRQLNTGDEFY--------LMEDNKLVCKADYEAAKAR-----EGSTKRPRTTITA 102
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQE 151
KQL TL++ YN +P+P ++EQL + T L RV++VWFQN+R K+K+ +
Sbjct: 103 KQLETLKSAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR----------LK 152
Query: 152 KDGRKMGYGSMQGIPMVASSPVRHDSPIGM 181
KD K +G +SS + P GM
Sbjct: 153 KDAGKTRWGDF----FRSSSGAKDSEPFGM 178
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 25 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
+G R RT + KQL TL++ YN +P+P ++EQL + T L
Sbjct: 90 EGSTKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGL 132
>gi|442615579|ref|NP_001259358.1| Lim1, isoform B [Drosophila melanogaster]
gi|440216561|gb|AGB95201.1| Lim1, isoform B [Drosophila melanogaster]
Length = 347
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 93 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 148
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 149 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 181
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G+ P R RT + KQL TL++ YNA+P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 170 GENPPKRPRTTITAKQLETLKSAYNASPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 229
Query: 138 KK 139
K+
Sbjct: 230 KR 231
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
G+ P R RT + KQL TL++ YNA+P+P ++EQL + T L
Sbjct: 170 GENPPKRPRTTITAKQLETLKSAYNASPKPARHVREQLSQDTGL 213
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ GD + + RT +N KQL L+ Y PRP M+E L T L+ +VI+VWFQN+R
Sbjct: 197 IGSGDNRKGKTRTSINPKQLIVLQATYEKEPRPSRAMREDLAAQTGLTAKVIQVWFQNRR 256
Query: 135 CKDKK 139
KDKK
Sbjct: 257 SKDKK 261
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 21 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
+ GD + + RT +N KQL L+ Y PRP M+E L T L
Sbjct: 197 IGSGDNRKGKTRTSINPKQLIVLQATYEKEPRPSRAMREDLAAQTGL 243
>gi|260794979|ref|XP_002592484.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277704|gb|EEN48495.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 330
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
GG K R+RT QL TL++ + N PD+ +QL + T L+ RV++VWFQN R K
Sbjct: 196 GGATKTKRIRTSFKHHQLRTLKSYFAINHNPDSKDLQQLAQKTGLTKRVLQVWFQNARAK 255
Query: 137 DKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNA 183
++ AL + DGR G G + V++SP PI ++
Sbjct: 256 HRRNALRLTD------DGRDGGSGVSMDVA-VSASPTSLSGPISTSS 295
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 280
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 281 KRLKKDAGRTRWSQY-------FRSMKGTGAGGHSP-RHDKLLDKDELKV 322
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 264
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 280
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 281 KRLKKDAGRTRWSQY-------FRSMKGTGAGGHSP-RHDKLLDKDELKV 322
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 264
>gi|300837159|gb|ADK38611.1| LIM homeodomain protein 3 isoform M2-LHX3 [Canis lupus familiaris]
Length = 265
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 26 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 81
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
R RT + KQL TL++ YN +P+P ++EQL T L + RV +V
Sbjct: 26 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDM-RVVQV 70
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YNA+P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 210 RPRTTITAKQLETLKSAYNASPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 265
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YNA+P+P ++EQL T L
Sbjct: 210 RPRTTITAKQLETLKSAYNASPKPARHVREQLSSETGL 247
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 218 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 277
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 278 KRLKKDAGRTRWSQY-------FRSMKGTGAGGHSP-RHDKLLDKDELKV 319
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 218 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 261
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 136 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 195
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 196 KRLKKDAGRTRWSQY-------FRSMKGAGAGGHSP-RHDKLLDKDELKV 237
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 136 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 179
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 244 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 303
Query: 138 KKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ +K+ + + + + SM+G SP RHD + + L+V
Sbjct: 304 KR----LKKDAGRTRWSQY--FRSMKGTGAGGHSP-RHDKLLDKDELKV 345
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL+ YN +P+P ++EQL + T L + RV +V
Sbjct: 244 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDM-RVVQV 294
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL++ Y+++P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 263 GDAASKRPRTTITAKQLETLKSAYSSSPKPARHVREQLAQDTGLDMRVVQVWFQNRRAKE 322
Query: 138 KK 139
K+
Sbjct: 323 KR 324
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL++ Y+++P+P ++EQL + T L
Sbjct: 263 GDAASKRPRTTITAKQLETLKSAYSSSPKPARHVREQLAQDTGL 306
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|295798064|emb|CBL87029.1| lim3 protein [Tribolium castaneum]
Length = 223
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 26/180 (14%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 4 GDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 63
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP RHD + + ++V L
Sbjct: 64 KRLKKDAGRTRWSQY-------FRSMKG----GSSP-RHDKLLDKDEMKVDLDSFSHHDL 111
Query: 197 SDFALHT------DLDRLDPSAAPFQHLVSQMHG-----YELGHGPPPPHDMGPTPGDMA 245
SD + T D D P + + S +HG Y GH PP H+ P P +A
Sbjct: 112 SDDSYGTVVNMSMDQDGSSPHSGIGR--PSFLHGATSPSYLPGHTPPHGHEPFPYPDQLA 169
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL+ YN +P+P ++EQL + T L + RV +V
Sbjct: 4 GDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDM-RVVQV 54
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 228 GDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 287
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP RHD + + ++V L
Sbjct: 288 KRLKKDAGRTRWSQY-------FRSMKG----GSSP-RHDKLLDKDEMKVDLDSFSHHDL 335
Query: 197 SD--FALHTDLDRLDPSAAPFQHL--VSQMHG-----YELGHGPPPPHDMGPTPGDMA 245
SD + ++ ++P + S +HG Y GH PP H+ P P +A
Sbjct: 336 SDDSYGTVVNMSMDQDGSSPHSGIGRPSFLHGATSPSYLPGHTPPHGHEPFPYPDQLA 393
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 16 SSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
S + + GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 220 SKAAECLDGDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGL 271
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G PM S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPMNLSPGGLDDGP 339
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 223 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 282
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 283 KRLKKDAGRTRWSQY-------FRSMKGTGAGGHSP-RHDKLLEKDELKV 324
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 223 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 266
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 217 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 276
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 277 KRLKKDAGRTRWSQY-------FRSMKGAGSGGHSP-RHDKLLDKDELKV 318
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 217 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 260
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 9/110 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 280
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q + SM+G SP RHD + + L+V
Sbjct: 281 KRLKKDAGRTRWSQY-------FRSMKGTGAGGHSP-RHDKLLEKDELKV 322
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 221 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 264
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 195 GDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 254
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SSP RHD + + ++V L
Sbjct: 255 KRLKKDAGRTRWSQY-------FRSMKG----GSSP-RHDKLLDKDEMKVDLDSFSHHDL 302
Query: 197 SD--FALHTDLDRLDPSAAPFQHL--VSQMHG-----YELGHGPPPPHDMGPTPGDMA 245
SD + ++ ++P + S +HG Y GH PP H+ P P +A
Sbjct: 303 SDDSYGTVVNMSMDQDGSSPHSGIGRPSFLHGATSPSYLPGHTPPHGHEPFPYPDQLA 360
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 16 SSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
S + + GD R RT + KQL TL+ YN +P+P ++EQL + T L + RV +V
Sbjct: 187 SKAAECLDGDQPNKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSQDTGLDM-RVVQV 245
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 228 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 287
Query: 138 KK 139
K+
Sbjct: 288 KR 289
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL+T YN +P+P ++EQL + T L + RV +V
Sbjct: 228 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDM-RVVQV 278
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 252 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 311
Query: 138 KK 139
K+
Sbjct: 312 KR 313
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 252 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 295
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 257 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 316
Query: 138 KK 139
K+
Sbjct: 317 KR 318
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 257 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 300
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 279
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 280 SNDSYSTVNLGLDEGASPHSIRGSYMHG 307
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 255 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 314
Query: 138 KK 139
K+
Sbjct: 315 KR 316
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 255 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 298
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 76 SGGDGKP----TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
+GGDG P +R RTV+ + QL L + AN P +E LVE T LS RVI+VWFQ
Sbjct: 173 NGGDGTPGSKKSRPRTVIKDDQLKVLHAAFTANHLPTKKEREDLVERTGLSMRVIQVWFQ 232
Query: 132 NKRCKDKK 139
NKR K++K
Sbjct: 233 NKRSKERK 240
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 229 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 288
Query: 138 KK 139
K+
Sbjct: 289 KR 290
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL+T YN +P+P ++EQL + T L + RV +V
Sbjct: 229 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDM-RVVQV 279
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 252 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 311
Query: 138 KK 139
K+
Sbjct: 312 KR 313
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 252 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 295
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 137 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 196
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 197 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 244
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 245 SNDSYSTVNLGLDEGASPHSIRGSYMHG 272
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 137 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 180
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 228 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 287
Query: 138 KK 139
K+
Sbjct: 288 KR 289
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 228 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 271
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 256 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 315
Query: 138 KK 139
K+
Sbjct: 316 KR 317
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 256 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 299
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 279
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 280 SNDSYSTVNLGLDEGASPHSIRGSYMHG 307
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK 139
K+
Sbjct: 232 KR 233
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK 139
K+
Sbjct: 232 KR 233
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
DG R RT +++KQL L+T Y +P+P ++++L + T L RV++VWFQNKR KD
Sbjct: 214 ADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDMRVVQVWFQNKRAKD 273
Query: 138 KK 139
K+
Sbjct: 274 KR 275
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 11 IVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLG 70
+V + + DG R RT +++KQL L+T Y +P+P ++++L + T L +
Sbjct: 201 LVCKADYEAAKARADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDM- 259
Query: 71 RVRKV 75
RV +V
Sbjct: 260 RVVQV 264
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK 139
K+
Sbjct: 232 KR 233
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 279
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 280 SNDSYSTVNLGLDEGASPHSIRGSYMHG 307
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
DG R RT +++KQL L+T Y +P+P ++++L + T L RV++VWFQNKR KD
Sbjct: 214 ADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDMRVVQVWFQNKRAKD 273
Query: 138 KK 139
K+
Sbjct: 274 KR 275
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 11 IVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLG 70
+V + + DG R RT +++KQL L+T Y +P+P ++++L + T L +
Sbjct: 201 LVCKADYEAAKARADGSQKRPRTTISQKQLDLLKTAYCVSPKPSRHVRQELSDKTGLDM- 259
Query: 71 RVRKV 75
RV +V
Sbjct: 260 RVVQV 264
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 174 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 233
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 234 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 281
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 282 SNDSYSTVNLGLDEGASPHSIRGSYMHG 309
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 11 IVSRTSSSGKVSG----GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTN 66
I R K G GD R RT + KQL TL+T YN +P+P ++EQL + T
Sbjct: 157 ICKRDYEEAKAKGLYLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTG 216
Query: 67 L 67
L
Sbjct: 217 L 217
>gi|441623345|ref|XP_003279691.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Nomascus
leucogenys]
Length = 419
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 173 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 228
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 173 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 210
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 279
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 280 SNDSYSTVNLGLDEGASPHSIRGSYMHG 307
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKAL 196
K+ + A + + Q + SM+G SP R D + + L+V L
Sbjct: 232 KRLKKDAGRTRWSQY-------FRSMKG----NCSP-RTDKFLDKDELKVDYDSFSHHDL 279
Query: 197 SDFALHTDLDRLDPSAAPFQHLVSQMHG 224
S+ + T LD A+P S MHG
Sbjct: 280 SNDSYSTVNLGLDEGASPHSIRGSYMHG 307
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 14/108 (12%)
Query: 33 TVLNEKQLHTLRTCYNANPRPDALMKE-QLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNE 91
+L ++QL+T Y LM++ +LV + + R +G R RT +
Sbjct: 141 CILCKRQLNTGDEFY--------LMEDNKLVCKADYEAAKAR-----EGSTKRPRTTITA 187
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 188 KQLETLKSAYNQSPKPARHVREQLSRDTGLDMRVVQVWFQNRRAKEKR 235
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 25 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+G R RT + KQL TL++ YN +P+P ++EQL T L + RV +V
Sbjct: 175 EGSTKRPRTTITAKQLETLKSAYNQSPKPARHVREQLSRDTGLDM-RVVQV 224
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+T YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK 139
K+
Sbjct: 232 KR 233
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+T YN +P+P ++EQL + T L
Sbjct: 172 GDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGL 215
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +N P+P ++EQL + T L RVI+VWFQNKR K+++ MK
Sbjct: 251 RTTIKAKQLEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----MK 306
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSP 178
Q + G M+G P+ S D P
Sbjct: 307 QITSMGRPPFFGGARKMRGFPINLSPGGLDDGP 339
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL++ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 151 GDQPNKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 210
Query: 138 KK 139
K+
Sbjct: 211 KR 212
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL++ YN +P+P ++EQL + T L + RV +V
Sbjct: 151 GDQPNKRPRTTITAKQLETLKSAYNNSPKPARHVREQLSQDTGLDM-RVVQV 201
>gi|308051668|gb|ADO00272.1| LIM homeodomain box protein 3 [Canis lupus familiaris]
Length = 107
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 7 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 62
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 7 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 44
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T ++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 305 RTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 360
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGM 181
Q + G M+G PM S D P G
Sbjct: 361 QLTSMGRGPFFGGSRKMRGFPMNLSPGGLEDGPPGF 396
>gi|307178765|gb|EFN67379.1| LIM/homeobox protein Lhx1 [Camponotus floridanus]
Length = 400
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 153 RTTIKAKQLEILKTAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 208
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q ++ G M+G P+
Sbjct: 209 QLTSMGRNPFFGGSRKMRGFPL 230
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DG R RT + KQL TL+ Y + +P ++EQL T L RV++VWFQN+R KDK
Sbjct: 240 DGNQKRPRTTITSKQLDTLKAAYTVSSKPSRAVREQLANETGLEVRVVQVWFQNRRAKDK 299
Query: 139 K 139
+
Sbjct: 300 R 300
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T ++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 291 RTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 346
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGM 181
Q + G M+G PM S D P G
Sbjct: 347 QLTSMGRGPFFGGSRKMRGFPMNLSPGGLEDGPPGF 382
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|327291516|ref|XP_003230467.1| PREDICTED: LIM/homeobox protein Lhx3-like, partial [Anolis
carolinensis]
Length = 314
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 75 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 130
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
R RT + KQL TL++ YN +P+P ++EQL T L + RV +V
Sbjct: 75 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDM-RVVQV 119
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 144 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 199
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 144 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 181
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix jacchus]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 157 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 216
Query: 138 KK 139
K+
Sbjct: 217 KR 218
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 157 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 200
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 56 LMKE-QLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
LM++ +LV T+ + R+ D R RT + KQL TL+ YN +P+P ++EQ
Sbjct: 130 LMEDSRLVCKTDYETAKQREA---DSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQ 186
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
L T L RV++VWFQN+R K+K+
Sbjct: 187 LSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 193
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 134 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 193
Query: 138 KK 139
K+
Sbjct: 194 KR 195
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 134 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 177
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 193
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens]
gi|6572501|gb|AAF17292.1| LHX3 protein [Homo sapiens]
Length = 370
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 132 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 187
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 132 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 169
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|26327877|dbj|BAC27679.1| unnamed protein product [Mus musculus]
Length = 256
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 34 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 89
Query: 146 Q 146
Q
Sbjct: 90 Q 90
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT + KQL TL+T Y+ +P+P ++EQL + T L RV++VWFQN+R K+K
Sbjct: 272 DNSNKRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGLDMRVVQVWFQNRRAKEK 331
Query: 139 K 139
+
Sbjct: 332 R 332
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 25 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+T Y+ +P+P ++EQL + T L
Sbjct: 272 DNSNKRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGL 314
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+ K D R RT + KQL TL+ YN +P+P ++EQL T L + RV +V
Sbjct: 144 TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDM-RVVQV 200
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix jacchus]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix jacchus]
Length = 373
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 135 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 190
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 135 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 172
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 135 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 190
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 135 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 172
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus griseus]
Length = 401
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 187 GDQPNKRPRTTITAKQLETLKLAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 246
Query: 138 KK 139
K+
Sbjct: 247 KR 248
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GD R RT + KQL TL+ YN +P+P ++EQL + T L + RV +V
Sbjct: 187 GDQPNKRPRTTITAKQLETLKLAYNNSPKPARHVREQLSQDTGLDM-RVVQV 237
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 141 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 200
Query: 138 KK 139
K+
Sbjct: 201 KR 202
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 11 IVSRTS-SSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
+V +T + K D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 127 LVCKTDYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 184
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+ K D R RT + KQL TL+ YN +P+P ++EQL T L + RV +V
Sbjct: 144 TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDM-RVVQV 200
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+ K D R RT + KQL TL+ YN +P+P ++EQL T L + RV +V
Sbjct: 144 TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDM-RVVQV 200
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 148 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 203
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 148 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 185
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 127 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 186
Query: 138 KK 139
K+
Sbjct: 187 KR 188
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 127 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 170
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta africana]
Length = 403
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGL 201
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 158 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 213
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 158 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 195
>gi|9971753|gb|AAG10399.1| lim-homeobox transcription factor LHX3 [Homo sapiens]
Length = 397
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT + KQL TL+T Y+ +P+P ++EQL + T L RV++VWFQN+R K+K
Sbjct: 212 DNSNKRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGLDMRVVQVWFQNRRAKEK 271
Query: 139 K 139
+
Sbjct: 272 R 272
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 25 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
D R RT + KQL TL+T Y+ +P+P ++EQL + T L
Sbjct: 212 DNSNKRPRTTITAKQLETLKTAYSNSPKPARHVREQLAQETGL 254
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 217 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 276
Query: 138 KK-RALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
K+ + A + + Q K G G SP RHD + + L+V
Sbjct: 277 KRLKKDAGRTRWSQYFRSMKSGAG--------GHSP-RHDKLLDKDELKV 317
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 217 GDQPNKRPRTTITAKQLETLKLAYNTSPKPARHVREQLSQDTGL 260
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 126 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKE 185
Query: 138 KK 139
K+
Sbjct: 186 KR 187
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+ K D R RT + KQL TL+ YN +P+P ++EQL T L + RV +V
Sbjct: 120 TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDM-RVVQV 176
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 74 KVSGG-------DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
KV GG D R RT ++ KQL TL+T Y +P+P ++EQL T L RV+
Sbjct: 153 KVRGGTDSDLEMDASNKRPRTTISAKQLETLKTAYANSPKPARHVREQLSSETGLDMRVV 212
Query: 127 RVWFQNKRCKDKK-RALAMKQQLQQEKDGRK 156
+VWFQN+R K+K+ + A +Q+ Q G K
Sbjct: 213 QVWFQNRRAKEKRLKKDANRQRWSQYFRGVK 243
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 18 SGKVSGG-------DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLG 70
+ KV GG D R RT ++ KQL TL+T Y +P+P ++EQL T L +
Sbjct: 151 AAKVRGGTDSDLEMDASNKRPRTTISAKQLETLKTAYANSPKPARHVREQLSSETGLDM- 209
Query: 71 RVRKV 75
RV +V
Sbjct: 210 RVVQV 214
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta africana]
Length = 401
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNNSPKPARHVREQLSSETGL 199
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 164 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 201
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 426 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 481
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|17568917|ref|NP_508669.1| Protein LIM-4 [Caenorhabditis elegans]
gi|1621631|gb|AAB17273.1| putative transcription factor LIM-4 [Caenorhabditis elegans]
gi|351063300|emb|CCD71434.1| Protein LIM-4 [Caenorhabditis elegans]
Length = 355
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT E QL L+T +N + PD E++
Sbjct: 217 LCKQHFLELVEGDSG----VSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 273 ASMTGLSKRVTQVWFQNSRARQKK 296
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|32402495|gb|AAP79290.2| lim 1/5 [Saccoglossus kowalevskii]
Length = 406
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 179 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 234
Query: 146 Q 146
Q
Sbjct: 235 Q 235
>gi|306526228|sp|Q25132.2|LHX3_HALRO RecName: Full=LIM/homeobox protein Lhx3; Short=Hr-Lhx3; Short=LIM
homeobox protein 3; AltName: Full=LIM/homeobox protein
LIM; Short=HrLIM
Length = 692
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 412 RPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 467
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>gi|332022879|gb|EGI63151.1| LIM/homeobox protein Lhx1 [Acromyrmex echinatior]
Length = 548
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 258 RTTIKAKQLEILKTAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 313
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q ++ G M+G P+
Sbjct: 314 QLTSMGRNPFFGGSRKMRGFPL 335
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GD R RT + KQL TL+ YN +P+P ++EQL + T L RV++VWFQN+R K+
Sbjct: 172 GDQPNKRPRTTITAKQLETLKMAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKE 231
Query: 138 KK 139
K+
Sbjct: 232 KR 233
Score = 37.4 bits (85), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 19 GKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
G GD R RT + KQL TL+ YN +P+P ++EQL + T L
Sbjct: 167 GGCLDGDQPNKRPRTTITAKQLETLKMAYNNSPKPARHVREQLSQDTGL 215
>gi|307195463|gb|EFN77349.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 142
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 2 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRA 61
Query: 136 KDKKRALAMKQQL 148
+ KK + +K Q+
Sbjct: 62 RQKKHSGKIKTQM 74
>gi|307197381|gb|EFN78656.1| LIM/homeobox protein Lhx1 [Harpegnathos saltator]
Length = 286
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L++ +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 146 RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 201
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q ++ G M+G P+
Sbjct: 202 QLTSMGRNPFFAGSRKMRGFPL 223
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 103 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 158
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 5 GSTKGGIVSRTSSSGKVSGGD----------GKPTRVRTVLNEKQLHTLRTCYNANPRPD 54
G T+GG V S V D R RT + KQL TL+ YN +P+P
Sbjct: 68 GRTRGGTVWLVEDSRLVCKADYETAKQREAESTAKRPRTTITAKQLETLKNAYNNSPKPA 127
Query: 55 ALMKEQLVEMTNLFLGRVRKV 75
++EQL T L + RV +V
Sbjct: 128 RHVREQLSSETGLDM-RVVQV 147
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 412 RPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 467
>gi|327284692|ref|XP_003227070.1| PREDICTED: LIM/homeobox protein Lhx1-like [Anolis carolinensis]
Length = 372
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 149 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 204
Query: 146 Q 146
Q
Sbjct: 205 Q 205
>gi|301611522|ref|XP_002935283.1| PREDICTED: LIM/homeobox protein Lhx3-like [Xenopus (Silurana)
tropicalis]
Length = 362
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 123 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 178
>gi|236201759|dbj|BAH58772.1| LIM homeodomain protein Hr-Lhx3 b-form [Halocynthia roretzi]
Length = 611
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 331 RPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 386
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 208 RPRTTITAKQLETLKLAYNQSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR---- 263
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSP 172
+K+ +++ G G+ P + ++P
Sbjct: 264 LKKDTSRQRWGEIFRSGAPSSGPQMHANP 292
>gi|46394864|gb|AAS91588.1| Lim1 [Oryctolagus cuniculus]
Length = 348
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 126 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 181
Query: 146 Q 146
Q
Sbjct: 182 Q 182
>gi|300422373|emb|CBH32495.1| LIM homeobox 1 [Dicentrarchus labrax]
Length = 299
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL T LS RVI+VWFQN+R K+++
Sbjct: 76 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLSMRVIQVWFQNRRSKERR 135
Query: 140 RALAMKQ 146
MKQ
Sbjct: 136 ----MKQ 138
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 74 KVSGGDGKPTRV-RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+ +GG G R RT + KQL L++ + A P+P ++EQL + T L RVI+VWFQN
Sbjct: 255 EATGGKGSKKRGPRTTIKAKQLEVLKSAFAATPKPTRHIREQLAKETGLPMRVIQVWFQN 314
Query: 133 KRCKDKK----RALAMKQQL 148
KR K+++ AL ++Q
Sbjct: 315 KRSKERRMKQLSALGARRQF 334
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + KQL TL+T Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 268 RPRTTITAKQLETLKTAYENSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR---- 323
Query: 144 MKQQLQQEKDGRKM 157
MK++ + + G+ +
Sbjct: 324 MKKEAPRNRWGQYL 337
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 164 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 219
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
>gi|20339337|gb|AAM19349.1| LIM homeobox protein [Homo sapiens]
Length = 239
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 8 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 63
>gi|21668482|dbj|BAC01272.1| LIM homeobox protein 4 [Homo sapiens]
Length = 240
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 9 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 64
>gi|449667571|ref|XP_004206594.1| PREDICTED: uncharacterized protein LOC100198304 [Hydra
magnipapillata]
Length = 1120
Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RTV+N KQL L+ + N +P L +E+L T L+ RVI+VWFQNKR K+++
Sbjct: 146 RTVINLKQLEVLKETFKVNQKPSRLEREKLATKTGLTTRVIQVWFQNKRSKERR 199
>gi|320169791|gb|EFW46690.1| hypothetical protein CAOG_04648 [Capsaspora owczarzaki ATCC 30864]
Length = 529
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
V+GG K TR RT + +QL L +N N PD + ++ T LS RVIR+WFQN+R
Sbjct: 323 VAGGRSK-TRRRTTITLEQLGMLEEAFNRNNLPDCFQRTEVSRTTGLSERVIRIWFQNRR 381
Query: 135 CKDKK 139
K ++
Sbjct: 382 AKQRR 386
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 325 RPRTTITAKQLETLKIAYNQSPKPARHVREQLSSDTGLDMRVVQVWFQNRRAKEKR 380
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+G R RT + KQL TL+ Y +P+P ++EQL + T L RV++VWFQN+R K+K
Sbjct: 166 EGTQKRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK 225
Query: 139 K 139
+
Sbjct: 226 R 226
>gi|258504705|gb|ACV72972.1| CEH-14 [Caenorhabditis remanei]
gi|258504707|gb|ACV72973.1| CEH-14 [Caenorhabditis remanei]
gi|258504709|gb|ACV72974.1| CEH-14 [Caenorhabditis remanei]
gi|258504713|gb|ACV72976.1| CEH-14 [Caenorhabditis remanei]
gi|258504717|gb|ACV72978.1| CEH-14 [Caenorhabditis remanei]
gi|258504719|gb|ACV72979.1| CEH-14 [Caenorhabditis remanei]
gi|258504721|gb|ACV72980.1| CEH-14 [Caenorhabditis remanei]
gi|258504723|gb|ACV72981.1| CEH-14 [Caenorhabditis remanei]
gi|258504727|gb|ACV72983.1| CEH-14 [Caenorhabditis remanei]
gi|258504729|gb|ACV72984.1| CEH-14 [Caenorhabditis remanei]
gi|258504731|gb|ACV72985.1| CEH-14 [Caenorhabditis remanei]
gi|258504733|gb|ACV72986.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R
Sbjct: 163 SEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRA 222
Query: 136 KDKK 139
K+K+
Sbjct: 223 KEKR 226
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+G R RT + KQL TL+ Y +P+P ++EQL + T L RV++VWFQN+R K+K
Sbjct: 166 EGTQKRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK 225
Query: 139 K 139
+
Sbjct: 226 R 226
>gi|258504735|gb|ACV72987.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R
Sbjct: 163 SEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRA 222
Query: 136 KDKK 139
K+K+
Sbjct: 223 KEKR 226
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T ++ P+P ++EQL + T+L RVI+VWFQNKR K+++ +K
Sbjct: 347 RTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETSLPMRVIQVWFQNKRSKERR----LK 402
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q + G M+G P+
Sbjct: 403 QLTSMGRGPFYGGARKMRGFPL 424
>gi|258504711|gb|ACV72975.1| CEH-14 [Caenorhabditis remanei]
Length = 300
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R
Sbjct: 159 SEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRA 218
Query: 136 KDKK 139
K+K+
Sbjct: 219 KEKR 222
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
>gi|308512223|ref|XP_003118294.1| CRE-CEH-14 protein [Caenorhabditis remanei]
gi|308238940|gb|EFO82892.1| CRE-CEH-14 protein [Caenorhabditis remanei]
Length = 409
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R
Sbjct: 231 SEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRA 290
Query: 136 KDKK 139
K+K+
Sbjct: 291 KEKR 294
>gi|258504715|gb|ACV72977.1| CEH-14 [Caenorhabditis remanei]
gi|258504725|gb|ACV72982.1| CEH-14 [Caenorhabditis remanei]
Length = 304
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R
Sbjct: 163 SEGDGSNKRPRTTISAKSLDTLKQAYQASSKPARHVREQLAAETGLDMRVVQVWFQNRRA 222
Query: 136 KDKK 139
K+K+
Sbjct: 223 KEKR 226
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ ++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 186 RTTIKAKQLEILKNAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 241
Query: 146 QQLQQEKDGRKMGYGS---MQGIPMVASSPVRHDSPIGM 181
Q GR +GS M+G PM S D P G
Sbjct: 242 QLTSM---GRGPFFGSSRKMRGFPMNLSPGGLDDGPPGF 277
>gi|308512521|ref|XP_003118443.1| CRE-LIM-4 protein [Caenorhabditis remanei]
gi|308239089|gb|EFO83041.1| CRE-LIM-4 protein [Caenorhabditis remanei]
Length = 355
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT + QL L+T +N + PD E++
Sbjct: 217 LCKQHFLELVEGDSG----VSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 272
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 273 ATMTGLSKRVTQVWFQNSRARQKK 296
>gi|195450712|ref|XP_002072600.1| GK13603 [Drosophila willistoni]
gi|194168685|gb|EDW83586.1| GK13603 [Drosophila willistoni]
Length = 3147
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 34 VLNEKQLHTLRTCYNANPRPDAL-MKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEK 92
+ N Q T NA+ R D L VE ++L ++++ + R+RT + +
Sbjct: 2836 IENNSQTLTFNDDDNASQRGDVLPSNTNDVEKSSLDSSGTQQLNAPSKQNKRLRTTILPE 2895
Query: 93 QLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
QL+ L CY P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2896 QLNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2942
>gi|268578911|ref|XP_002644438.1| C. briggsae CBR-LIM-4 protein [Caenorhabditis briggsae]
Length = 346
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT + QL L+T +N + PD E++
Sbjct: 209 LCKQHYLELVEGDSG----VSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 264
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 265 ANMTGLSKRVTQVWFQNSRARQKK 288
>gi|558491|gb|AAB31260.1| LIM-type homeodomain [Mus sp.]
Length = 230
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 1 RTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 54
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Query: 75 VSGGDGKPTR------VRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
VSGG+ + T RT + KQL TL+ + A P+P ++EQL + T L+ RVI+V
Sbjct: 232 VSGGNNENTLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQV 291
Query: 129 WFQNKRCKDKKRALAMKQ 146
WFQN+R K+++ MKQ
Sbjct: 292 WFQNRRSKERR----MKQ 305
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 4 SGSTKGGIVSRTSSSGKVSGGDGKPTR------VRTVLNEKQLHTLRTCYNANPRPDALM 57
SG++ +S VSGG+ + T RT + KQL TL+ + A P+P +
Sbjct: 215 SGNSSDNEAGSATSKDGVSGGNNENTLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHI 274
Query: 58 KEQLVEMTNLFLGRVRKV 75
+EQL + T L + RV +V
Sbjct: 275 REQLAQETGLNM-RVIQV 291
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Nomascus
leucogenys]
Length = 323
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 105 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 160
Query: 146 Q 146
Q
Sbjct: 161 Q 161
>gi|432094974|gb|ELK26382.1| LIM/homeobox protein Lhx5 [Myotis davidii]
Length = 315
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 188 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 243
Query: 146 Q 146
Q
Sbjct: 244 Q 244
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|328719609|ref|XP_001948758.2| PREDICTED: hypothetical protein LOC100167266 [Acyrthosiphon pisum]
Length = 996
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DG+ RVR+ + + QL L+ CY ANPRP ++ + + RV++VWFQN R +D+
Sbjct: 645 DGRKIRVRSQIADDQLAVLKECYAANPRPKREELSRIADRIGFNVRVVQVWFQNNRARDR 704
Query: 139 K 139
+
Sbjct: 705 R 705
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 271 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 326
Query: 146 Q 146
Q
Sbjct: 327 Q 327
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 150 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 205
Query: 146 Q 146
Q
Sbjct: 206 Q 206
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|256073006|ref|XP_002572824.1| lhx-5 [Schistosoma mansoni]
gi|360042903|emb|CCD78313.1| putative lim homeobox protein [Schistosoma mansoni]
Length = 397
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+T + A P+P ++E L + T LS RVI+VWFQN+R K+++ MK
Sbjct: 56 RTTIKAKQLDTLKTAFAATPKPTRHVRESLAQETGLSMRVIQVWFQNRRSKERR----MK 111
Query: 146 Q 146
Q
Sbjct: 112 Q 112
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
+G DG+P RVRT QL ++T + N PDA +QL + T L+ RV++VWFQN R
Sbjct: 175 TGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGLTKRVLQVWFQNARA 234
Query: 136 KDKK 139
K ++
Sbjct: 235 KFRR 238
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 22 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKVSGGDGK 81
+G DG+P RVRT QL ++T + N PDA +QL + T L RV +V + +
Sbjct: 175 TGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLSQKTGL-TKRVLQVWFQNAR 233
Query: 82 PTRVRTVLNEKQ 93
RTV N Q
Sbjct: 234 AKFRRTVCNTSQ 245
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like [Sus
scrofa]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein LMX-2; AltName:
Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
G GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K
Sbjct: 172 GAVGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSK 231
Query: 137 DKKRALAMKQ 146
+++ MKQ
Sbjct: 232 ERR----MKQ 237
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 181 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 236
Query: 146 Q 146
Q
Sbjct: 237 Q 237
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 176 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 235
Query: 140 RALAMKQ 146
MKQ
Sbjct: 236 ----MKQ 238
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|307182932|gb|EFN69942.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 458
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 319 GGKGSKTKRVRTTFTEEQLAVLQANFQMDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRA 378
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 379 RQKKHSGKIKTQMHH 393
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
G GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K
Sbjct: 165 GAVGKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSQETGLNMRVIQVWFQNRRSK 224
Query: 137 DKKRALAMKQ 146
+++ MKQ
Sbjct: 225 ERR----MKQ 230
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 343 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 398
Query: 146 Q 146
Q
Sbjct: 399 Q 399
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|258504172|gb|ACV72780.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT + QL L+T +N + PD E++
Sbjct: 187 LCKQHFLELVEGDSG----VSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid feature:
LIM2, bp 326 .. 481; amino acid feature: LIM1, bp 149
..292 [Gallus gallus]
Length = 406
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
>gi|268580151|ref|XP_002645058.1| C. briggsae CBR-CEH-14 protein [Caenorhabditis briggsae]
Length = 351
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y + +P ++EQL T L RV++VWFQN+R
Sbjct: 174 SEGDGGNKRPRTTISAKSLETLKQAYQTSSKPARHIREQLASETGLDMRVVQVWFQNRRA 233
Query: 136 KDKK 139
K+K+
Sbjct: 234 KEKR 237
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 185 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 240
Query: 146 Q 146
Q
Sbjct: 241 Q 241
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|37789883|gb|AAP04274.1| ScLim1 [Scyliorhinus canicula]
Length = 237
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 127 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 182
Query: 146 Q 146
Q
Sbjct: 183 Q 183
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|258504166|gb|ACV72777.1| LIM-4 [Caenorhabditis remanei]
gi|258504168|gb|ACV72778.1| LIM-4 [Caenorhabditis remanei]
gi|258504170|gb|ACV72779.1| LIM-4 [Caenorhabditis remanei]
gi|258504174|gb|ACV72781.1| LIM-4 [Caenorhabditis remanei]
gi|258504176|gb|ACV72782.1| LIM-4 [Caenorhabditis remanei]
gi|258504178|gb|ACV72783.1| LIM-4 [Caenorhabditis remanei]
gi|258504180|gb|ACV72784.1| LIM-4 [Caenorhabditis remanei]
gi|258504182|gb|ACV72785.1| LIM-4 [Caenorhabditis remanei]
gi|258504188|gb|ACV72788.1| LIM-4 [Caenorhabditis remanei]
gi|258504190|gb|ACV72789.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT + QL L+T +N + PD E++
Sbjct: 187 LCKQHFLELVEGDSG----VSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
RVRT QL T+++ + N PDA +QL + T LS RV++VWFQN R K ++ L
Sbjct: 284 RVRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKYRRNVL- 342
Query: 144 MKQQLQQEKDGRKMG 158
KQQ +DG+ G
Sbjct: 343 -KQQGDPSRDGKPGG 356
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 187 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 242
Query: 146 Q 146
Q
Sbjct: 243 Q 243
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 177 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Query: 140 RALAMKQ 146
MKQ
Sbjct: 237 ----MKQ 239
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L++ +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 249 RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 304
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q + G M+G P+
Sbjct: 305 QLTSMGRSPFFGGSRKMRGFPL 326
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|258504160|gb|ACV72774.1| LIM-4 [Caenorhabditis remanei]
gi|258504162|gb|ACV72775.1| LIM-4 [Caenorhabditis remanei]
gi|258504164|gb|ACV72776.1| LIM-4 [Caenorhabditis remanei]
gi|258504184|gb|ACV72786.1| LIM-4 [Caenorhabditis remanei]
gi|258504186|gb|ACV72787.1| LIM-4 [Caenorhabditis remanei]
Length = 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ +E+ G VS K RVRT + QL L+T +N + PD E++
Sbjct: 187 LCKQHFLELVEGDSG----VSSQKAKTKRVRTTFADDQLSVLQTYFNRDSNPDGADLEKI 242
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKK 139
MT LS RV +VWFQN R + KK
Sbjct: 243 ATMTGLSKRVTQVWFQNSRARQKK 266
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SGG +P RVRT E+QL L+ +N + PD E++ ++T LS RV +VWFQN R
Sbjct: 192 SGGH-RPKRVRTTFTEEQLRVLQANFNIDSNPDGQDLERIAQITGLSKRVTQVWFQNSRA 250
Query: 136 KDKK 139
+ KK
Sbjct: 251 RQKK 254
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
SG+ G +P RVRT E+QL L+ +N + PD E++ ++T L
Sbjct: 187 SGESGSGGHRPKRVRTTFTEEQLRVLQANFNIDSNPDGQDLERIAQITGL 236
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 262 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 317
Query: 146 Q 146
Q
Sbjct: 318 Q 318
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 54 DALMKE-QLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMK 112
D + E Q+ E+ +G+ K RT + KQL TL++ + A P+P ++
Sbjct: 147 DTICDEFQVDEIDGDMMGKDNSDDSNSAKRRGPRTTIKAKQLETLKSAFAATPKPTRHIR 206
Query: 113 EQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQ 146
EQL + T L+ RVI+VWFQN+R K+++ MKQ
Sbjct: 207 EQLAQETGLNMRVIQVWFQNRRSKERR----MKQ 236
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|431915961|gb|ELK16215.1| LIM/homeobox protein Lhx4 [Pteropus alecto]
Length = 329
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 98 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 153
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|149551088|ref|XP_001517055.1| PREDICTED: LIM/homeobox protein Lhx5-like, partial [Ornithorhynchus
anatinus]
Length = 231
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 135 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 190
Query: 146 Q 146
Q
Sbjct: 191 Q 191
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT + KQL L+ YN +P+P ++EQL T L RV++VWFQN+R K+K
Sbjct: 210 DAANKRPRTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEK 269
Query: 139 K 139
+
Sbjct: 270 R 270
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+T ++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 245 RTTIKAKQLEILKTAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 300
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVAS 170
Q + G M+G P+ S
Sbjct: 301 QLTSMGRSPFFGGSRKMRGFPLNIS 325
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 207 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 260
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 4 SGSTKGGIVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE 63
+GS + + T +S S K RT + KQL TL+ + A P+P ++EQL +
Sbjct: 179 NGSNGADLAATTGTSVGTSSNGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQ 238
Query: 64 MTNL 67
T L
Sbjct: 239 ETGL 242
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 134 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 189
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1;
Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 238
Query: 146 Q 146
Q
Sbjct: 239 Q 239
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 238
Query: 140 RALAMKQ 146
MKQ
Sbjct: 239 ----MKQ 241
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L++ +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 256 RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 311
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q + G M+G P+
Sbjct: 312 QLTSMGRSPFFGGSRKMRGFPL 333
>gi|392925293|ref|NP_001256980.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
gi|351020895|emb|CCD62868.1| Protein LIM-6, isoform b [Caenorhabditis elegans]
Length = 316
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 186 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK-- 243
Query: 142 LAMKQQLQQEKDGRKMGYGSM-QGIPMVASSPVRHDSPIGMNALEV-----TSYQPPWKA 195
+ ++ D K G GS + + SS +S I ++A EV +SY P +
Sbjct: 244 --LNKKDSDSGDTFKHGPGSEGRSTEDIRSSDDEEESVINLDADEVETSETSSYTDPIQK 301
Query: 196 L 196
L
Sbjct: 302 L 302
>gi|336267446|ref|XP_003348489.1| hypothetical protein SMAC_02983 [Sordaria macrospora k-hell]
gi|380092144|emb|CCC10412.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 682
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 63 EMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLS 122
++++ LG V + G R RT +K + L YNANP+PD ++ +V +L+
Sbjct: 57 QLSSQPLGEVERHPKGK----RKRTTAKDKAI--LEGAYNANPKPDKAARQDIVNRVSLN 110
Query: 123 PRVIRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQ------GIPMVASSPVRHD 176
+ +++WFQN+R D++++ + Q + + YG MQ +P+ S P H
Sbjct: 111 EKEVQIWFQNRRQNDRRKSRPLSPQ-----EIAALRYGGMQILSSDNTLPVYTSEP-EHT 164
Query: 177 SPI-GMNALEVTSYQPP 192
SP+ +++LE PP
Sbjct: 165 SPVQAVSSLEQEYSSPP 181
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 238
Query: 140 RALAMKQ 146
MKQ
Sbjct: 239 ----MKQ 241
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 179 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 238
Query: 140 RALAMKQ 146
MKQ
Sbjct: 239 ----MKQ 241
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+G R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K
Sbjct: 163 EGGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEK 222
Query: 139 K 139
+
Sbjct: 223 R 223
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ ++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 248 RTTIKAKQLEVLKNAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 303
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q + G M+G PM
Sbjct: 304 QLTSMGRGPFFGGARKMRGFPM 325
>gi|157820803|ref|NP_001101818.1| LIM/homeobox protein Lhx4 [Rattus norvegicus]
gi|149058350|gb|EDM09507.1| LIM homeobox protein 4 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 98 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 153
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|190361014|gb|ACE76893.1| Lim1, partial [Emys orbicularis]
Length = 261
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 150 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 205
Query: 146 Q 146
Q
Sbjct: 206 Q 206
>gi|8248965|gb|AAC60669.2| lateral and intermediate mesoderm differentiation and neurogenesis
protein [Mus sp.]
Length = 407
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+ + MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKEAR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 185 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 240
>gi|94039292|dbj|BAE93505.1| LIM homeobox protein 4 [Bos taurus]
Length = 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 40 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 95
>gi|148707455|gb|EDL39402.1| LIM homeobox protein 4, isoform CRA_a [Mus musculus]
Length = 329
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 98 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 153
>gi|383857875|ref|XP_003704429.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 358
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R
Sbjct: 218 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRA 277
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 278 RQKKHSGKIKTQMHH 292
>gi|358334202|dbj|GAA52638.1| LIM/homeobox protein Lhx5 [Clonorchis sinensis]
Length = 698
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 70 GRVRKVSGGDGKPTRV-RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
G++ G G R RT + KQL TL+ + A P+P ++E L + T LS RVI+V
Sbjct: 571 GQLSGCGTGAGTKRRGPRTTIKAKQLETLKAAFAATPKPTRHVRETLAQETGLSMRVIQV 630
Query: 129 WFQNKRCKDKKRALAMKQ 146
WFQN+R K+++ MKQ
Sbjct: 631 WFQNRRSKERR----MKQ 644
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 537 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 592
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5;
AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|291398972|ref|XP_002715167.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 1
[Oryctolagus cuniculus]
Length = 377
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKDA 139
>gi|350404762|ref|XP_003487212.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 331
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R
Sbjct: 191 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRA 250
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 251 RQKKHSGKIKTQMHH 265
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 70 GRVRKVSGGDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPR 124
G + + GG G + RVRT QL T+++ + N PDA +QL + T LS R
Sbjct: 246 GDLMRQDGGYGSQPPPRQKRVRTSFKHHQLRTMKSYFALNHNPDAKDLKQLAQKTGLSKR 305
Query: 125 VIRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSP----VRHDSPIG 180
V++VWFQN+ RA + L+ + D K G G Q A SP ++ D I
Sbjct: 306 VLQVWFQNEGVVQNARAKYRRNMLKSDSD--KTGQGGSQSSDQSAVSPDDDKIKDDQSIS 363
Query: 181 MNALEVTSYQPPWKALSDFA 200
E+ Q P A+SD +
Sbjct: 364 -ELTELDDSQSP-DAMSDIS 381
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 428 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 483
>gi|328781528|ref|XP_001121397.2| PREDICTED: LIM/homeobox protein Awh [Apis mellifera]
Length = 352
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R
Sbjct: 212 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRA 271
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 272 RQKKHSGKIKTQMHH 286
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 236 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 291
Query: 146 Q 146
Q
Sbjct: 292 Q 292
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|341877265|gb|EGT33200.1| CBN-CEH-14 protein [Caenorhabditis brenneri]
Length = 358
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
S GDG R RT ++ K L TL+ Y + +P ++EQL T L RV++VWFQN+R
Sbjct: 179 SEGDGGNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLAADTGLDMRVVQVWFQNRRA 238
Query: 136 KDKK 139
K+K+
Sbjct: 239 KEKR 242
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 236 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 291
Query: 146 Q 146
Q
Sbjct: 292 Q 292
>gi|340721085|ref|XP_003398956.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
Length = 329
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R
Sbjct: 189 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRA 248
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 249 RQKKHSGKIKTQMHH 263
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 236 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 291
Query: 146 Q 146
Q
Sbjct: 292 Q 292
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT + KQL L+ YN +P+P ++EQL T L RV++VWFQN+R K+K
Sbjct: 269 DNANKRPRTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEK 328
Query: 139 K 139
+
Sbjct: 329 R 329
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 218 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 273
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|170034028|ref|XP_001844877.1| arrowhead [Culex quinquefasciatus]
gi|167875285|gb|EDS38668.1| arrowhead [Culex quinquefasciatus]
Length = 213
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QLH L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 103 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 161
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|291398974|ref|XP_002715168.1| PREDICTED: diencephalon/mesencephalon homeobox 1 isoform 2
[Oryctolagus cuniculus]
Length = 382
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKDA 144
>gi|380013576|ref|XP_003690828.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 351
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R
Sbjct: 211 GGKGSKTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRA 270
Query: 136 KDKKRALAMKQQLQQ 150
+ KK + +K Q+
Sbjct: 271 RQKKHSGKIKTQMHH 285
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|149574597|ref|XP_001510717.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Ornithorhynchus anatinus]
Length = 362
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 64 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 123
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 124 QRSLQKEQLQKQKD 137
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 235 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 290
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|324511084|gb|ADY44626.1| LIM/homeobox protein Awh [Ascaris suum]
Length = 384
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 56 LMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQL 115
L K+ VE+ G+ + K RVRT E+QL L+T + + PD E++
Sbjct: 229 LCKQHYVELVEGETGQQK------AKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERI 282
Query: 116 VEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSP 172
MT LS RV +VWFQN R + KK Q K G ++ GS + SSP
Sbjct: 283 ATMTGLSKRVTQVWFQNSRARQKK--------YQGTKKGHRLSNGSGRSSTDPCSSP 331
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
V V + R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQ
Sbjct: 154 VFTVDDSEAGAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQ 213
Query: 132 NKRCKDK--KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTS 188
N+R K+K K+ + Q K ++ GS QG A DS + ++ S
Sbjct: 214 NRRAKEKRLKKDAGRHRWGQFYKSVKRSRGGSKQGKESSAEDCGVSDSELSFQEDQILS 272
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 303 RTTIKAKQLEVLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 358
Query: 146 Q 146
Q
Sbjct: 359 Q 359
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+G R RT + KQL TL+ Y +P+P ++EQL + T L RV++VWFQN+R K+K
Sbjct: 166 EGTQKRPRTTITAKQLETLKQAYQNSPKPARHVREQLSQETGLDMRVVQVWFQNRRAKEK 225
Query: 139 K 139
+
Sbjct: 226 R 226
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|354470034|ref|XP_003497402.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cricetulus griseus]
gi|344238464|gb|EGV94567.1| Diencephalon/mesencephalon homeobox protein 1 [Cricetulus griseus]
Length = 378
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGR-KMGYGSMQG 164
++ K+QLQ++K+ G G M+
Sbjct: 125 QRSLQKEQLQKQKEAEGSHGEGKMEA 150
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|354470038|ref|XP_003497403.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cricetulus griseus]
Length = 383
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDGR-KMGYGSMQG 164
++ K+QLQ++K+ G G M+
Sbjct: 130 QRSLQKEQLQKQKEAEGSHGEGKMEA 155
>gi|171543907|ref|NP_001116404.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
gi|157410512|gb|ABV53979.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
Length = 434
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 106 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 165
Query: 141 ALAM-KQQLQQEKDGRKMGYGSMQ 163
++ K+QLQ++K+ GS +
Sbjct: 166 QRSLQKEQLQKQKEASAAAEGSTE 189
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda melanoleuca]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 158 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 213
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|322787267|gb|EFZ13403.1| hypothetical protein SINV_03010 [Solenopsis invicta]
Length = 334
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 77 GGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G T RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R
Sbjct: 194 GGKGSKTKRVRTTFTEEQLAVLQANFQMDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRA 253
Query: 136 KDKKRALAMKQQ 147
+ KK + +K Q
Sbjct: 254 RQKKHSGKIKTQ 265
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L++ +++ P+P ++EQL + T L RVI+VWFQNKR K+++ +K
Sbjct: 242 RTTIKAKQLEILKSAFSSTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERR----LK 297
Query: 146 QQLQQEKDGRKMGYGSMQGIPM 167
Q + G M+G P+
Sbjct: 298 QLTSMGRSPFFGGSRKMRGFPL 319
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 145 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 200
>gi|170584682|ref|XP_001897123.1| Lin-11 protein [Brugia malayi]
gi|158595453|gb|EDP34006.1| Lin-11 protein, putative [Brugia malayi]
Length = 250
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + + P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 78 RTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 133
Query: 146 Q 146
Q
Sbjct: 134 Q 134
>gi|7511466|pir||T34266 LIM homeobox protein ceh-14 - Caenorhabditis elegans
Length = 348
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GDG R RT ++ K L TL+ Y + +P ++EQL T L RV++VWFQN+R K+
Sbjct: 173 GDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKE 232
Query: 138 KK 139
K+
Sbjct: 233 KR 234
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|270004906|gb|EFA01354.1| apterous 2 [Tribolium castaneum]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ R+RT QL T++T + N PDA +QL + T LS RV++VWFQN R K ++
Sbjct: 33 RTKRMRTSFKHHQLRTMKTYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 92
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVAS 170
+ +++ G+ G G P V S
Sbjct: 93 IM-------RQEGGQSQGQSQANGPPSVGS 115
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++
Sbjct: 175 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERR 234
Query: 140 RALAMKQ 146
MKQ
Sbjct: 235 ----MKQ 237
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|170034026|ref|XP_001844876.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
gi|167875284|gb|EDS38667.1| LIM/homeobox protein Awh [Culex quinquefasciatus]
Length = 198
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QLH L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 86 KSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 144
>gi|17551226|ref|NP_509273.1| Protein CEH-14 [Caenorhabditis elegans]
gi|21264444|sp|P20271.3|HM14_CAEEL RecName: Full=Homeobox protein ceh-14
gi|8572736|gb|AAF77181.1|AF244368_1 LIM homeobox protein CEH-14 [Caenorhabditis elegans]
gi|351063218|emb|CCD71294.1| Protein CEH-14 [Caenorhabditis elegans]
Length = 351
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GDG R RT ++ K L TL+ Y + +P ++EQL T L RV++VWFQN+R K+
Sbjct: 176 GDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKE 235
Query: 138 KK 139
K+
Sbjct: 236 KR 237
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 136 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 191
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 134 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 189
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 145 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 200
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 136 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 191
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 133 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 188
>gi|393908204|gb|EJD74952.1| hypothetical protein LOAG_17805, partial [Loa loa]
Length = 252
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + + P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 84 RTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 139
Query: 146 Q 146
Q
Sbjct: 140 Q 140
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
GG K RVRT E+QLH L+ + + PD E++ +T LS RV +VWFQN R +
Sbjct: 135 GGRSKSKRVRTTFTEEQLHVLQANFLLDSNPDGQDLERIANLTGLSKRVTQVWFQNMRAR 194
Query: 137 DKK 139
KK
Sbjct: 195 HKK 197
>gi|357617809|gb|EHJ71006.1| special homeobox protein 8 [Danaus plexippus]
Length = 369
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 73 RKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
+ +SGG KP R+RT Q+ L Y N D + +L E+ NL+ R I++WFQN
Sbjct: 146 KPLSGGVKKPKRIRTAFTSSQMMELENEYTRNRYLDRSRRIELSEILNLNERTIKIWFQN 205
Query: 133 KRCKDKK-RALAMK 145
+R K+KK RA +++
Sbjct: 206 RRMKEKKDRAESLE 219
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|56694834|gb|AAW23079.1| Lmx-b [Oikopleura dioica]
gi|313239052|emb|CBY14034.1| unnamed protein product [Oikopleura dioica]
Length = 419
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 67 LFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
L L RK G +P RT+LN+ Q + + P+P ++E+L E T LS RV+
Sbjct: 225 LVLDTDRKNLGAAKRP---RTILNQAQRRRFKEAFETTPKPCRKVREKLAEETGLSQRVV 281
Query: 127 RVWFQNKRCKDKKRA 141
+VWFQN+R K KK A
Sbjct: 282 QVWFQNQRAKVKKIA 296
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 75 VSGGDGKPT-RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
V DGK + R RT+LN Q + + P+P ++E L + T L+ RV++VWFQN+
Sbjct: 384 VDSKDGKRSKRPRTILNAVQRRAFKAAFEVTPKPCRKVRETLAKDTGLTVRVVQVWFQNQ 443
Query: 134 RCKDKKRALAMKQQLQQ---EKDGRKMGY 159
R K KK LA +QQ Q+ +K + GY
Sbjct: 444 RAKMKK--LAKRQQSQEAAAQKAREEFGY 470
>gi|241716001|ref|XP_002412129.1| arrowhead, putative [Ixodes scapularis]
gi|215505217|gb|EEC14711.1| arrowhead, putative [Ixodes scapularis]
Length = 114
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
K RVRT E+QL L+ +N + PD E++ ++T LS RV +VWFQN R +
Sbjct: 28 AKAKTKRVRTTFTEEQLQVLQANFNLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQ 87
Query: 138 KK 139
KK
Sbjct: 88 KK 89
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|402581255|gb|EJW75203.1| hypothetical protein WUBG_13886 [Wuchereria bancrofti]
Length = 185
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R K+K
Sbjct: 10 DSNTKRPRTTISAKSLETLKQAYQASSKPARHVREQLAADTGLDMRVVQVWFQNRRAKEK 69
Query: 139 K 139
+
Sbjct: 70 R 70
>gi|301603587|ref|XP_002931450.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 367
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKDS 144
>gi|118094490|ref|XP_001234036.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
1 [Gallus gallus]
Length = 362
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKD 138
>gi|326925300|ref|XP_003208855.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Meleagris gallopavo]
Length = 362
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKD 138
>gi|350296393|gb|EGZ77370.1| hypothetical protein NEUTE2DRAFT_78800 [Neurospora tetrasperma FGSC
2509]
Length = 670
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT +K + L YNANP+PD ++ +V +L+ + +++WFQN+R D++++
Sbjct: 72 RKRTTAKDKAI--LEAAYNANPKPDKAARQDIVNRVSLNEKEVQIWFQNRRQNDRRKSRP 129
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTS 188
+ Q + + YG MQ + + PV P + ++V S
Sbjct: 130 LSPQ-----EIAALRYGGMQILSSDNTLPVYTSEPENTSPIQVAS 169
>gi|336464307|gb|EGO52547.1| hypothetical protein NEUTE1DRAFT_133183 [Neurospora tetrasperma
FGSC 2508]
Length = 670
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT +K + L YNANP+PD ++ +V +L+ + +++WFQN+R D++++
Sbjct: 72 RKRTTAKDKAI--LEAAYNANPKPDKAARQDIVNRVSLNEKEVQIWFQNRRQNDRRKSRP 129
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTS 188
+ Q + + YG MQ + + PV P + ++V S
Sbjct: 130 LSPQ-----EIAALRYGGMQILSSDNTLPVYTSEPENTSPIQVVS 169
>gi|326925298|ref|XP_003208854.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Meleagris gallopavo]
Length = 367
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKD 143
>gi|301603585|ref|XP_002931449.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKDS 139
>gi|157137279|ref|XP_001663969.1| arrowhead [Aedes aegypti]
gi|108869747|gb|EAT33972.1| AAEL013765-PA [Aedes aegypti]
Length = 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QLH L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 89 NKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 148
>gi|118094492|ref|XP_422451.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B isoform
2 [Gallus gallus]
Length = 367
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKD 143
>gi|157818253|ref|NP_001101431.1| diencephalon/mesencephalon homeobox 1 [Rattus norvegicus]
gi|149035616|gb|EDL90297.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149035617|gb|EDL90298.1| diencephalon/mesencephalon homeobox 1 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 376
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGR-KMGYGSMQ 163
++ K+QLQ++K+ G G M+
Sbjct: 125 QRSLQKEQLQKQKEAEGSHGEGKME 149
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|327270989|ref|XP_003220270.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Anolis carolinensis]
Length = 362
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKDS 139
>gi|85112826|ref|XP_964419.1| hypothetical protein NCU03266 [Neurospora crassa OR74A]
gi|28926200|gb|EAA35183.1| predicted protein [Neurospora crassa OR74A]
Length = 671
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT +K + L YNANP+PD ++ +V +L+ + +++WFQN+R D++++
Sbjct: 72 RKRTTAKDKAI--LEAAYNANPKPDKAARQDIVNRVSLNEKEVQIWFQNRRQNDRRKSRP 129
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTS 188
+ Q + + YG MQ + + PV P + ++V S
Sbjct: 130 LSPQ-----EIAALRYGGMQILSSDNTLPVYTSEPENTSPIQVVS 169
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
+ R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 AESTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
>gi|209489337|gb|ACI49110.1| hypothetical protein Cbre_JD13.012 [Caenorhabditis brenneri]
Length = 369
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 209 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 264
Query: 146 Q 146
Q
Sbjct: 265 Q 265
>gi|345498243|ref|XP_001606522.2| PREDICTED: hypothetical protein LOC100122913 [Nasonia vitripennis]
Length = 422
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
GR SGG+GK R RT +QL L ++ PDA M+E+L + LS ++VW
Sbjct: 221 GRSGAGSGGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVW 280
Query: 130 FQNKRCKDKK 139
FQN+R K +K
Sbjct: 281 FQNRRAKCRK 290
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKVSG 77
SG SGG+GK R RT +QL L ++ PDA M+E+L + L RV+
Sbjct: 223 SGAGSGGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWF- 281
Query: 78 GDGKPTRVRTVLNEKQLH 95
+ R + +E QLH
Sbjct: 282 ---QNRRAKCRKHESQLH 296
>gi|224058107|ref|XP_002195953.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Taeniopygia guttata]
Length = 362
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKD 138
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 70 GRVRKVSGGDGKPTRVR---TVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
G + +G DGKP +VR T QLH L + PD +E+L +LS +
Sbjct: 5 GSGEESAGEDGKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARV 64
Query: 127 RVWFQNKRCKDKKRALAMKQQ 147
+VWFQN+R K +KR A+ ++
Sbjct: 65 QVWFQNRRAKWRKREKALGRE 85
>gi|449266387|gb|EMC77440.1| Diencephalon/mesencephalon homeobox protein 1-B [Columba livia]
Length = 362
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKD 138
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 251 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 306
Query: 146 Q 146
Q
Sbjct: 307 Q 307
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 70 GRVRKVSGGDGKPTRVR---TVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
G + +G DGKP +VR T QLH L + PD +E+L +LS +
Sbjct: 85 GSGEESAGEDGKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARV 144
Query: 127 RVWFQNKRCKDKKRALAMKQQ 147
+VWFQN+R K +KR A+ ++
Sbjct: 145 QVWFQNRRAKWRKREKALGRE 165
>gi|327270987|ref|XP_003220269.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Anolis carolinensis]
Length = 367
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKDS 144
>gi|312075111|ref|XP_003140272.1| hypothetical protein LOAG_04687 [Loa loa]
Length = 136
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+T + + PD E++ MT LS RV +VWFQN R + KK
Sbjct: 13 AKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQNSRARQKK 72
>gi|23308671|ref|NP_694509.1| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-L
[Danio rerio]
gi|82243528|sp|Q8JI10.1|DMX1A_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-A;
AltName: Full=Paired homeobox protein 1
gi|22085902|gb|AAM90587.1|AF398525_1 homeoprotein Mbx-L [Danio rerio]
gi|27475512|gb|AAL58532.1| paired homeobox protein [Danio rerio]
Length = 388
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKD 143
>gi|401825783|ref|XP_003886986.1| homeodomain-containing transcription factor [Encephalitozoon hellem
ATCC 50504]
gi|392998143|gb|AFM98005.1| homeodomain-containing transcription factor [Encephalitozoon hellem
ATCC 50504]
Length = 228
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 73 RKVSGG---DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R+ GG D + R + QL L + N RPDA M+++L E ++PR ++VW
Sbjct: 18 REAEGGQYFDPYFVKHRKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVW 77
Query: 130 FQNKRCKDKKRALAMKQQLQQE 151
FQN+R K KK L K+ +QQE
Sbjct: 78 FQNRRAKIKK--LTQKKMMQQE 97
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R K+K
Sbjct: 145 DCNNKRPRTTISAKSLETLKQAYQASSKPARHVREQLAADTGLDMRVVQVWFQNRRAKEK 204
Query: 139 KRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSP 172
+ L+++ R YG +G+ ++SP
Sbjct: 205 R--------LKKDAGRRWNAYGVPKGLDSDSASP 230
>gi|91078266|ref|XP_971202.1| PREDICTED: similar to GA10520-PA [Tribolium castaneum]
Length = 343
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 222 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKH 281
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
K + Q +D G+G + + S +++S + + P AL D +
Sbjct: 282 MHTGKIKTQSREDN---GFGRHINLHLTYSFQQQNNSKTSL-------FGQPESALDDLS 331
>gi|18252581|gb|AAL66342.1|AF461038_1 paired-type homeobox Atx [Gallus gallus]
Length = 303
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 66 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 125
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 126 QRSLQKEQLQKQKD 139
>gi|30348975|ref|NP_835457.2| diencephalon/mesencephalon homeobox protein 1-A isoform Mbx-S
[Danio rerio]
gi|22085905|gb|AAM90588.1|AF398526_1 homeoprotein Mbx-S [Danio rerio]
gi|134024855|gb|AAI34895.1| Diencephalon/mesencephalon homeobox 1a [Danio rerio]
Length = 383
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 125 QRSLQKEQLQKQKD 138
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 23/160 (14%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+G K R RT QL + + PD M+EQL +L+ ++VWFQN+R
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRR 164
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWK 194
K +K K++ QQ M GI VA +D +G T QP
Sbjct: 165 AKWRK-----KERFQQ-----------MAGIRQVALGADPYDISMGQRQNGYTQAQP--- 205
Query: 195 ALSDFALHTDLDRLDPSAAP--FQHLVSQMHGYELGHGPP 232
+ + T+ + P + P F + +Q H Y PP
Sbjct: 206 --TQWTTTTNASCMAPQSNPASFMGVATQAHSYLTSASPP 243
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 87 TVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQ 146
T + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MKQ
Sbjct: 185 TTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MKQ 240
>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
Length = 829
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 90 NEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMK 145
+ +Q+ L YN P+P AL ++QL+ ++N+ P+ I+VWFQN+RC++K+R A +
Sbjct: 22 SNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAAR 81
Query: 146 QQ 147
Q
Sbjct: 82 LQ 83
>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
nudum]
Length = 827
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 90 NEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMK 145
+ +Q+ L YN P+P AL ++QL+ ++N+ P+ I+VWFQN+RC++K+R A +
Sbjct: 22 SNEQVEALERLYNECPKPSALRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAAR 81
Query: 146 QQ 147
Q
Sbjct: 82 LQ 83
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 255 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 310
Query: 146 Q 146
Q
Sbjct: 311 Q 311
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 23/160 (14%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+G K R RT QL + + PD M+EQL +L+ ++VWFQN+R
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRR 164
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWK 194
K +K K++ QQ M GI VA +D +G T QP
Sbjct: 165 AKWRK-----KERFQQ-----------MAGIRQVALGADPYDISMGQRQNGYTQAQP--- 205
Query: 195 ALSDFALHTDLDRLDPSAAP--FQHLVSQMHGYELGHGPP 232
+ + T+ + P + P F + +Q H Y PP
Sbjct: 206 --TQWTTTTNASCMAPQSNPASFMGVATQAHSYLTSASPP 243
>gi|443683851|gb|ELT87953.1| hypothetical protein CAPTEDRAFT_174285 [Capitella teleta]
Length = 368
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
G K R RT +QL L ++ PD +M+E+L MTNL I+VWF+N+R K
Sbjct: 99 GSHRKQRRSRTAFTNQQLAALEKTFSKTHYPDVVMRERLAMMTNLPEARIQVWFKNRRAK 158
Query: 137 DKKRALAMKQQ 147
+K+ A K Q
Sbjct: 159 FRKKQRAQKMQ 169
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++
Sbjct: 175 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERR 234
Query: 140 RALAMKQ 146
MKQ
Sbjct: 235 ----MKQ 237
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 245 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 300
Query: 146 Q 146
Q
Sbjct: 301 Q 301
>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
nudum]
Length = 819
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRC 135
GK R T +Q+ L + YN P+P +L ++QL++ ++N+ P+ I+VWFQN+RC
Sbjct: 17 GKYVRYTT----EQVDALESLYNECPKPSSLRRQQLIKECPILSNIEPKQIKVWFQNRRC 72
Query: 136 KDKKRALAMKQQ 147
++K+R A + Q
Sbjct: 73 REKQRKEASRLQ 84
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 89 LNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
+ KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 168 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 218
>gi|396081108|gb|AFN82727.1| Homeodomain-containing transcription factor-like protein
[Encephalitozoon romaleae SJ-2008]
Length = 227
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 73 RKVSGG---DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R+ GG D + R + QL L + N RPDA M+++L E ++PR ++VW
Sbjct: 18 REAEGGQYFDPYFVKHRKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVW 77
Query: 130 FQNKRCKDKKRALAMKQQLQQE 151
FQN+R K KK L K+ +QQE
Sbjct: 78 FQNRRAKIKK--LTQKKMMQQE 97
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 240 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 295
Query: 146 Q 146
Q
Sbjct: 296 Q 296
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 240 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 295
Query: 146 Q 146
Q
Sbjct: 296 Q 296
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 240 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 295
Query: 146 Q 146
Q
Sbjct: 296 Q 296
>gi|21623544|dbj|BAC00919.1| PaxB [Mus musculus]
Length = 387
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 76 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 135
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 136 QRSLQKEQLQKQKEA 150
>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
Length = 405
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT + KQL L+ YN +P+P ++EQL T L RV++VWFQN+R K+K
Sbjct: 113 DSANKRPRTTITAKQLEALKRAYNESPKPVRHVREQLSAETGLDMRVVQVWFQNRRAKEK 172
Query: 139 K 139
+
Sbjct: 173 R 173
>gi|263359688|gb|ACY70524.1| hypothetical protein DVIR88_6g0061 [Drosophila virilis]
Length = 3204
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 34 VLNEKQLHTLRTCYNANPRPD--ALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNE 91
+ N Q+ T N +P+ D AL + L L ++S + R+RT +
Sbjct: 2881 IENNSQMLTFNDDDNLSPKVDNVALSAAAVKANDCLPLDSSVQLSAPSKQNKRLRTTILP 2940
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
QL+ L CY P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2941 DQLNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2988
>gi|195402227|ref|XP_002059708.1| GJ19746 [Drosophila virilis]
gi|194155922|gb|EDW71106.1| GJ19746 [Drosophila virilis]
Length = 3176
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 34 VLNEKQLHTLRTCYNANPRPD--ALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNE 91
+ N Q+ T N +P+ D AL + L L ++S + R+RT +
Sbjct: 2859 IENNSQMLTFNDDDNLSPKVDNVALSAAAVKANDCLPLDSSVQLSAPSKQNKRLRTTILP 2918
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
QL+ L CY P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2919 DQLNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2966
>gi|395858212|ref|XP_003801467.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Otolemur
garnettii]
Length = 379
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|401826612|ref|XP_003887399.1| homeobox domain-containing protein [Encephalitozoon hellem ATCC
50504]
gi|395459917|gb|AFM98418.1| homeobox domain-containing protein [Encephalitozoon hellem ATCC
50504]
Length = 108
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + Q+ TL C+ NP P +++L ++ N+SPR +++WFQN+R K K RA
Sbjct: 13 RTRMTGSQIKTLMACFQDNPFPTTATRQELSKILNISPRTVQIWFQNQRQKTKNRA---- 68
Query: 146 QQLQQEKDGRKMGYGSM-QGIP 166
+ G +MG G + +G P
Sbjct: 69 ------RRGSEMGEGGISKGCP 84
>gi|431896854|gb|ELK06118.1| Diencephalon/mesencephalon homeobox protein 1 [Pteropus alecto]
Length = 407
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 100 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 159
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 160 QRSLQKEQLQKQKEA 174
>gi|348504628|ref|XP_003439863.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Oreochromis niloticus]
Length = 395
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGRKMGYGSMQ 163
++ K+QLQ++K+ + G+ +
Sbjct: 125 QRSLQKEQLQKQKETQGAAEGATE 148
>gi|327289193|ref|XP_003229309.1| PREDICTED: pituitary homeobox 3-like [Anolis carolinensis]
Length = 267
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G KP R RT +QL L + N PD +E++ TNL+ IRVWF+N+R K
Sbjct: 47 GKKKPRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAGWTNLTEPRIRVWFKNRRAKW 106
Query: 138 KKRALAMKQQLQQEKDGRKMGYG 160
+K K++ QQ+ + K G+G
Sbjct: 107 RK-----KERHQQQSELCKGGFG 124
>gi|348553431|ref|XP_003462530.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cavia porcellus]
Length = 372
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKE 138
>gi|195064402|ref|XP_001996563.1| GH24013 [Drosophila grimshawi]
gi|193892109|gb|EDV90975.1| GH24013 [Drosophila grimshawi]
Length = 3216
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 19/92 (20%)
Query: 62 VEMTNLFLGRVRKVSGGDGKPT--------------RVRTVLNEKQLHTLRTCYNANPRP 107
VE NL VS DG P+ R+RT + QL+ L CY P
Sbjct: 2912 VESVNL-----STVSANDGTPSDSSIQLSAPSKQNKRLRTTILPDQLNFLYECYQTESNP 2966
Query: 108 DALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
M E++ + NL RV++VWFQN R KDKK
Sbjct: 2967 SRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2998
>gi|432104477|gb|ELK31095.1| Diencephalon/mesencephalon homeobox protein 1 [Myotis davidii]
Length = 378
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 89 LNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
+ KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 144 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 194
>gi|21623546|dbj|BAC00920.1| PaxB [Homo sapiens]
Length = 382
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|379698940|ref|NP_001243941.1| arrowhead PA [Bombyx mori]
gi|346223348|dbj|BAK78925.1| arrowhead PA [Bombyx mori]
Length = 274
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 147 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKKH 206
Query: 141 ALAMKQQLQQ--EKDGRKMGYG 160
K + Q ++G +G+G
Sbjct: 207 QHTGKGKQNQLMSREGDAVGFG 228
>gi|308220074|gb|ADO22609.1| LIM class homeobox transcription factor Lhx1.5 [Mnemiopsis leidyi]
Length = 288
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
+++VS GK RT + KQL L+ + +N +P ++EQL T L+ RVI+VWFQ
Sbjct: 200 IKQVSTTTGKRRGPRTTIKSKQLDILKAAFKSNQKPTRNIREQLATETGLNMRVIQVWFQ 259
Query: 132 NKRCKD 137
N+R KD
Sbjct: 260 NRRSKD 265
>gi|25990914|gb|AAN76724.1| Mbx [Mus musculus]
Length = 381
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 222 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 277
Query: 146 Q 146
Q
Sbjct: 278 Q 278
>gi|426329498|ref|XP_004025777.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 379
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 89 LNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
+ KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 157 ITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 207
>gi|335291547|ref|XP_003356526.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like [Sus
scrofa]
Length = 379
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|149693672|ref|XP_001495012.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Equus caballus]
Length = 377
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|311259384|ref|XP_003128068.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Sus scrofa]
Length = 384
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|385862194|ref|NP_001178121.2| diencephalon/mesencephalon homeobox protein 1 [Bos taurus]
gi|296488954|tpg|DAA31067.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 1 [Bos
taurus]
Length = 374
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|70909349|ref|NP_001020738.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Mus
musculus]
gi|16903553|gb|AAL30509.1|AF421858_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|21902328|gb|AAM78514.1|AF499446_1 PRD class homeobox protein [Mus musculus]
gi|30047398|gb|AAH50912.1| Diencephalon/mesencephalon homeobox 1 [Mus musculus]
gi|148698681|gb|EDL30628.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
gi|148698682|gb|EDL30629.1| diencephalon/mesencephalon homeobox 1, isoform CRA_a [Mus musculus]
Length = 376
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|348504630|ref|XP_003439864.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Oreochromis niloticus]
Length = 400
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDGRKMGYGSMQ 163
++ K+QLQ++K+ + G+ +
Sbjct: 130 QRSLQKEQLQKQKETQGAAEGATE 153
>gi|301768196|ref|XP_002919510.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 377
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|70909343|ref|NP_570935.3| diencephalon/mesencephalon homeobox protein 1 isoform a [Mus
musculus]
gi|81916299|sp|Q91ZK4.1|DMBX1_MOUSE RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Diencephalon/mesencephalon-expressed brain
homeobox gene 1 protein; AltName: Full=Orthodenticle
homolog 3; AltName: Full=Paired-like homeobox protein
DMBX1; AltName: Full=Paired-type homeobox Atx
gi|16903551|gb|AAL30508.1|AF421857_1 paired-like homeobox protein DMBX1 [Mus musculus]
gi|18390053|gb|AAL68836.1|AF463513_1 cerebellar-diencephalic-mesencephalic homeobox protein [Mus
musculus]
Length = 381
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|440907315|gb|ELR57475.1| Diencephalon/mesencephalon homeobox protein 1 [Bos grunniens mutus]
Length = 380
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 71 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 130
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 131 QRSLQKEQLQKQKEA 145
>gi|402854421|ref|XP_003891868.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Papio
anubis]
Length = 377
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|426329500|ref|XP_004025778.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 384
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|332219855|ref|XP_003259073.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Nomascus leucogenys]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|195564294|ref|XP_002105757.1| GD24406 [Drosophila simulans]
gi|194201631|gb|EDX15207.1| GD24406 [Drosophila simulans]
Length = 2054
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 1888 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 1943
>gi|195133994|ref|XP_002011423.1| GI14048 [Drosophila mojavensis]
gi|193912046|gb|EDW10913.1| GI14048 [Drosophila mojavensis]
Length = 3231
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 34 VLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQ 93
+ N Q+ T N +PR +++ + + + ++S + R+RT + Q
Sbjct: 2890 IENNSQMLTFNDDENPSPRVESIKSNDCLPLDTTSV----QLSAPSKQNKRLRTTILPDQ 2945
Query: 94 LHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
L+ L CY P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2946 LNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2991
>gi|149693674|ref|XP_001495032.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Equus caballus]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|157128769|ref|XP_001661512.1| arrowhead [Aedes aegypti]
gi|108872464|gb|EAT36689.1| AAEL011247-PA [Aedes aegypti]
Length = 271
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QLH L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 159 NKSKRVRTTFTEEQLHILQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 218
>gi|410967185|ref|XP_003990102.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Felis catus]
Length = 374
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|348553433|ref|XP_003462531.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cavia porcellus]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKE 143
>gi|344278734|ref|XP_003411147.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 1 [Loxodonta africana]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|27436936|ref|NP_757379.1| diencephalon/mesencephalon homeobox protein 1 isoform a [Homo
sapiens]
gi|22085908|gb|AAM90589.1|AF398527_1 homeoprotein MBX-S [Homo sapiens]
gi|119627312|gb|EAX06907.1| diencephalon/mesencephalon homeobox 1 [Homo sapiens]
gi|261858964|dbj|BAI46004.1| diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|410967187|ref|XP_003990103.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Felis catus]
Length = 379
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|296488955|tpg|DAA31068.1| TPA: diencephalon/mesencephalon homeobox 1-like isoform 2 [Bos
taurus]
Length = 379
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|449668650|ref|XP_002164986.2| PREDICTED: uncharacterized protein LOC100211037 [Hydra
magnipapillata]
Length = 250
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+G D + R RT QLH L TC+ N PD M+E + + +L+ +R+WF+N+R
Sbjct: 41 TAGVDNRIRRQRTHFTVTQLHRLETCFARNRYPDMAMREDIAQWCSLTESRVRIWFKNRR 100
Query: 135 CKDKKRALAMKQ 146
K +K+ +++
Sbjct: 101 AKWRKKERHLER 112
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 8 KGGIVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
K + ++ +SG +G D + R RT QLH L TC+ N PD M+E + + +L
Sbjct: 28 KQDVENKEDTSGYTAGVDNRIRRQRTHFTVTQLHRLETCFARNRYPDMAMREDIAQWCSL 87
Query: 68 FLGRVR 73
RVR
Sbjct: 88 TESRVR 93
>gi|301768198|ref|XP_002919511.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|195125467|ref|XP_002007199.1| GI12512 [Drosophila mojavensis]
gi|193918808|gb|EDW17675.1| GI12512 [Drosophila mojavensis]
Length = 239
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 104 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 163
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 164 RARQKKHIHAGKNKIRE 180
>gi|403291750|ref|XP_003936930.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|344278736|ref|XP_003411148.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
isoform 2 [Loxodonta africana]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|198462127|ref|XP_001352344.2| GA13024 [Drosophila pseudoobscura pseudoobscura]
gi|198142726|gb|EAL29310.2| GA13024 [Drosophila pseudoobscura pseudoobscura]
Length = 3036
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
V V+ + R+RT + +QL+ L CY + P M E++ + NL RV++VWFQ
Sbjct: 2775 VSPVNAPSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQ 2834
Query: 132 NKRCKDKK 139
N R KDKK
Sbjct: 2835 NSRAKDKK 2842
>gi|195016322|ref|XP_001984389.1| GH16430 [Drosophila grimshawi]
gi|193897871|gb|EDV96737.1| GH16430 [Drosophila grimshawi]
Length = 239
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 104 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 163
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 164 RARQKKHIHAGKNKIRE 180
>gi|281351948|gb|EFB27532.1| hypothetical protein PANDA_008151 [Ailuropoda melanoleuca]
Length = 383
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 71 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 130
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 131 QRSLQKEQLQKQKEA 145
>gi|195172546|ref|XP_002027058.1| GL18142 [Drosophila persimilis]
gi|194112836|gb|EDW34879.1| GL18142 [Drosophila persimilis]
Length = 3044
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
V V+ + R+RT + +QL+ L CY + P M E++ + NL RV++VWFQ
Sbjct: 2774 VSPVNAPSKQNKRLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQ 2833
Query: 132 NKRCKDKK 139
N R KDKK
Sbjct: 2834 NSRAKDKK 2841
>gi|297278622|ref|XP_001098052.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Macaca mulatta]
gi|355557967|gb|EHH14747.1| hypothetical protein EGK_00718 [Macaca mulatta]
gi|355745257|gb|EHH49882.1| hypothetical protein EGM_00614 [Macaca fascicularis]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + + P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLDTLKAAFASTPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
Length = 854
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 70 GRVRKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLS 122
G+ R GG G P T +Q+ L Y+ P+P +L ++QL+ ++N+
Sbjct: 9 GKDRSSPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 68
Query: 123 PRVIRVWFQNKRCKDKKRALAMKQQLQQEK 152
P+ I+VWFQN+RC++K+R A + Q K
Sbjct: 69 PKQIKVWFQNRRCREKQRKEASRLQTVNRK 98
>gi|22218349|ref|NP_671725.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Homo
sapiens]
gi|74762571|sp|Q8NFW5.1|DMBX1_HUMAN RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Orthodenticle homolog 3; AltName:
Full=Paired-like homeobox protein DMBX1
gi|22085911|gb|AAM90590.1|AF398528_1 homeoprotein MBX-L [Homo sapiens]
gi|162318062|gb|AAI56882.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
gi|162319248|gb|AAI56065.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|351711411|gb|EHB14330.1| Diencephalon/mesencephalon homeobox protein 1 [Heterocephalus
glaber]
Length = 379
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 71 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 130
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 131 QRSLQKEQLQKQKE 144
>gi|332808875|ref|XP_524575.3| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan troglodytes]
gi|397483203|ref|XP_003812793.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan paniscus]
Length = 377
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|195375542|ref|XP_002046559.1| GJ12418 [Drosophila virilis]
gi|194153717|gb|EDW68901.1| GJ12418 [Drosophila virilis]
Length = 239
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 104 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 163
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 164 RARQKKHIHAGKNKIRE 180
>gi|195354385|ref|XP_002043678.1| GM26799 [Drosophila sechellia]
gi|194128866|gb|EDW50909.1| GM26799 [Drosophila sechellia]
Length = 1811
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 1568 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 1623
>gi|345780841|ref|XP_853026.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Canis lupus familiaris]
Length = 373
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|332808877|ref|XP_003308127.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan troglodytes]
gi|397483205|ref|XP_003812794.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan paniscus]
Length = 382
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|390465901|ref|XP_003733484.1| PREDICTED: LOW QUALITY PROTEIN: diencephalon/mesencephalon homeobox
protein 1 [Callithrix jacchus]
Length = 508
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 195 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 254
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 255 QRSLQKEQLQKQKEA 269
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + + +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 149 DGRRGPKRPRTILTSAQRRQFKASFEISPKPCRKVREALAKETGLSVRVVQVWFQNQRAK 208
Query: 137 DKKRALAMKQQLQQEKDG 154
KK L K +++ EK+G
Sbjct: 209 MKK--LQRKAKIEAEKNG 224
>gi|47213896|emb|CAF95838.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 67 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 126
Query: 141 ALAM-KQQLQQEKDGRKMGYGS 161
++ K+QLQ++K+ GS
Sbjct: 127 QRSLQKEQLQKQKEAAGAPEGS 148
>gi|395530279|ref|XP_003767224.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1
[Sarcophilus harrisii]
Length = 316
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKE 138
>gi|332219857|ref|XP_003259074.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Nomascus leucogenys]
Length = 382
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
Length = 851
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQ 146
E+Q+ L Y+ P+P+A ++QL+ ++N+ P+ I+VWFQN+RC++K+R A +
Sbjct: 23 EEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVWFQNRRCREKQRKEATRL 82
Query: 147 QLQQEK 152
EK
Sbjct: 83 LALNEK 88
>gi|74095943|ref|NP_001027814.1| paired homeobox protein [Takifugu rubripes]
gi|27475514|gb|AAL58533.1| paired homeobox protein [Takifugu rubripes]
Length = 380
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGRKMGYGS 161
++ K+QLQ++K+ GS
Sbjct: 125 QRSLQKEQLQKQKEAAGAPEGS 146
>gi|158296021|ref|XP_316578.4| AGAP006540-PA [Anopheles gambiae str. PEST]
gi|157016312|gb|EAA11207.4| AGAP006540-PA [Anopheles gambiae str. PEST]
Length = 334
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+ K RVRT E+QL L+ +N + PD E++ +T LS RV +VWFQN R + K
Sbjct: 160 NNKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQK 219
Query: 139 K 139
K
Sbjct: 220 K 220
>gi|312089563|ref|XP_003146293.1| hypothetical protein LOAG_10721 [Loa loa]
gi|307758541|gb|EFO17775.1| hypothetical protein LOAG_10721 [Loa loa]
Length = 212
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q + + +P ++EQL + TNLS RV++VWFQN+R K KK
Sbjct: 80 PKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVRVVQVWFQNQRAKLKK-- 137
Query: 142 LAMKQQLQQEKD 153
+ KQ++ + D
Sbjct: 138 IQRKQEISEAND 149
>gi|345780839|ref|XP_003432043.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Canis lupus familiaris]
Length = 378
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|19173075|ref|NP_597626.1| similarity to LIM-HOMEOBOX PROTEIN LMX1_MESAU [Encephalitozoon
cuniculi GB-M1]
gi|51701602|sp|Q8SW18.1|HD10_ENCCU RecName: Full=Homeobox protein HD-10; AltName: Full=EcHD-10
gi|19168742|emb|CAD26261.1| similarity to LIM-HOMEOBOX PROTEIN LMX1_MESAU [Encephalitozoon
cuniculi GB-M1]
gi|30793778|tpg|DAA01304.1| TPA_exp: homeodomain protein EcHD-10 [Encephalitozoon cuniculi]
gi|449329692|gb|AGE95962.1| lim-homeobox protein [Encephalitozoon cuniculi]
Length = 227
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L + N RPDA M+++L E ++PR ++VWFQN+R K KK L
Sbjct: 34 RKRTT--KAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWFQNRRAKIKK--LT 89
Query: 144 MKQQLQQE 151
K+ +QQE
Sbjct: 90 QKKMMQQE 97
>gi|312371799|gb|EFR19895.1| hypothetical protein AND_21633 [Anopheles darlingi]
Length = 284
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
+ K RVRT E+QL L+ +N + PD E++ +T LS RV +VWFQN R + K
Sbjct: 127 NSKTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQK 186
Query: 139 K 139
K
Sbjct: 187 K 187
>gi|195161060|ref|XP_002021388.1| GL25299 [Drosophila persimilis]
gi|198465223|ref|XP_001353549.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
gi|194118501|gb|EDW40544.1| GL25299 [Drosophila persimilis]
gi|198150064|gb|EAL31062.2| GA10520 [Drosophila pseudoobscura pseudoobscura]
Length = 275
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 160 RPRTTITAKQLETLKSAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 215
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D + R RT+L Q + + ANP+P ++EQL T L+ RV++VWFQN+R K K
Sbjct: 156 DRQAKRPRTILTTSQRRKFKQAFEANPKPCRKVREQLAAETGLTIRVVQVWFQNQRAKVK 215
Query: 139 KRAL---------AMKQQLQQEKDGRKMGY 159
K + K++L+ E DG K GY
Sbjct: 216 KTSRKGGKDTNEKGRKRKLRSE-DGEKDGY 244
>gi|195587560|ref|XP_002083529.1| GD13784 [Drosophila simulans]
gi|194195538|gb|EDX09114.1| GD13784 [Drosophila simulans]
Length = 278
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 143 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 202
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 203 RARQKKHIHAGKNKMRE 219
>gi|195441498|ref|XP_002068546.1| GK20529 [Drosophila willistoni]
gi|194164631|gb|EDW79532.1| GK20529 [Drosophila willistoni]
Length = 275
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|194769677|ref|XP_001966928.1| GF19021 [Drosophila ananassae]
gi|190618027|gb|EDV33551.1| GF19021 [Drosophila ananassae]
Length = 2954
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2705 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2760
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT + ++QL LR ++ N P ++ + +NL +V++ WF+N K+++R
Sbjct: 1789 RARTRITDEQLKILRAHFDINNSPSEESIMEMSQKSNLPMKVVKHWFRNTLFKERQR 1845
>gi|432913637|ref|XP_004078989.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oryzias latipes]
Length = 389
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGRKMG 158
++ K+QLQ++K+ + G
Sbjct: 125 QRSLQKEQLQKQKESGEGG 143
>gi|194913558|ref|XP_001982725.1| GG16389 [Drosophila erecta]
gi|190647941|gb|EDV45244.1| GG16389 [Drosophila erecta]
Length = 2760
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2516 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2571
>gi|442630036|ref|NP_001261379.1| arrowhead, isoform C [Drosophila melanogaster]
gi|440215263|gb|AGB94074.1| arrowhead, isoform C [Drosophila melanogaster]
Length = 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 77 GGDGKPTRV-RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
GG G R RT + KQL L+ ++ P+P ++EQL + T L RVI+VWFQNKR
Sbjct: 216 GGAGSKRRGPRTTIKAKQLEILKNAFSQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRS 275
Query: 136 KDKK 139
K+++
Sbjct: 276 KERR 279
>gi|156364672|ref|XP_001626470.1| predicted protein [Nematostella vectensis]
gi|156213347|gb|EDO34370.1| predicted protein [Nematostella vectensis]
Length = 304
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ G K RVRT E QL L+ +N + PD E++ ++T LS RV +VWFQN R
Sbjct: 173 LKSGRHKAKRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSR 232
Query: 135 CKDKK 139
+ KK
Sbjct: 233 ARQKK 237
>gi|195469355|ref|XP_002099603.1| GE14550 [Drosophila yakuba]
gi|194185704|gb|EDW99315.1| GE14550 [Drosophila yakuba]
Length = 2872
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2622 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2677
>gi|395730561|ref|XP_002810927.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Pongo
abelii]
Length = 377
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
+ K+QLQ++K+
Sbjct: 125 QRTLQKEQLQKQKEA 139
>gi|24656992|ref|NP_728906.1| arrowhead, isoform B [Drosophila melanogaster]
gi|194866170|ref|XP_001971791.1| GG15164 [Drosophila erecta]
gi|195491511|ref|XP_002093592.1| GE21383 [Drosophila yakuba]
gi|62510367|sp|Q8IRC7.1|AWH_DROME RecName: Full=LIM/homeobox protein Awh; AltName: Full=Protein
arrowhead
gi|23092944|gb|AAN11572.1| arrowhead, isoform B [Drosophila melanogaster]
gi|94400621|gb|ABF17921.1| FI01007p [Drosophila melanogaster]
gi|190653574|gb|EDV50817.1| GG15164 [Drosophila erecta]
gi|194179693|gb|EDW93304.1| GE21383 [Drosophila yakuba]
Length = 275
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|194749355|ref|XP_001957104.1| GF24228 [Drosophila ananassae]
gi|190624386|gb|EDV39910.1| GF24228 [Drosophila ananassae]
Length = 275
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+L Q ++ + NP+P ++EQL T LS RV++VWFQN+R K KK A
Sbjct: 154 PKRPRTILTTSQRRKFKSAFELNPKPCRKVREQLAAETGLSVRVVQVWFQNQRAKVKKLA 213
Query: 142 LAMKQ 146
Q
Sbjct: 214 RRQNQ 218
>gi|47187014|emb|CAG14813.1| unnamed protein product [Tetraodon nigroviridis]
Length = 135
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 97 LRTCYNANPRPDALMKEQLVEMTNLS 122
+RTCYNANPRPDALMKEQLVEMT LS
Sbjct: 36 VRTCYNANPRPDALMKEQLVEMTGLS 61
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/25 (92%), Positives = 24/25 (96%)
Query: 43 LRTCYNANPRPDALMKEQLVEMTNL 67
+RTCYNANPRPDALMKEQLVEMT L
Sbjct: 36 VRTCYNANPRPDALMKEQLVEMTGL 60
>gi|195337236|ref|XP_002035235.1| GM14592 [Drosophila sechellia]
gi|194128328|gb|EDW50371.1| GM14592 [Drosophila sechellia]
Length = 275
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKMRE 216
>gi|386763452|ref|NP_001245425.1| Zn finger homeodomain 2, isoform B [Drosophila melanogaster]
gi|383293093|gb|AFH06785.1| Zn finger homeodomain 2, isoform B [Drosophila melanogaster]
Length = 3003
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2760 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2815
>gi|18252583|gb|AAL66343.1|AF461039_1 paired-type homeobox Atx [Mus musculus]
Length = 282
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|24638633|ref|NP_524623.2| Zn finger homeodomain 2, isoform A [Drosophila melanogaster]
gi|48429221|sp|P28167.2|ZFH2_DROME RecName: Full=Zinc finger protein 2; AltName: Full=Zinc finger
homeodomain protein 2
gi|10726314|gb|AAF59339.2| Zn finger homeodomain 2, isoform A [Drosophila melanogaster]
Length = 3005
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2762 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2817
>gi|158823|gb|AAA29051.1| zinc-finger homeodomain protein 2 [Drosophila melanogaster]
Length = 3005
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2762 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2817
>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
Length = 857
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++QL+ + N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 19 EQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCREKQRKEASRLQ 78
Query: 148 LQQEK 152
K
Sbjct: 79 TVNRK 83
>gi|358414621|ref|XP_003582878.1| PREDICTED: LIM homeobox transcription factor 1-beta [Bos taurus]
Length = 315
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 116 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 175
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 176 VQVWFQNQRAKMKKLA 191
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ G + + R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R
Sbjct: 437 IPGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNAR 496
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASS 171
K R + +KQ+ + +K + GS+ + + +S
Sbjct: 497 A--KWRRMVLKQEGKSDKCDGSVDSGSLGDLELYGNS 531
>gi|410924614|ref|XP_003975776.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Takifugu rubripes]
Length = 387
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKEA 139
>gi|341898967|gb|EGT54902.1| CBN-LIM-6 protein [Caenorhabditis brenneri]
Length = 316
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 187 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK-- 244
Query: 142 LAMKQQLQQEKDGRKMGYGS 161
M ++ D K G GS
Sbjct: 245 --MNKKDSDSTDTFKHGPGS 262
>gi|402590254|gb|EJW84185.1| LIM/homeobox protein Awh [Wuchereria bancrofti]
Length = 200
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+T + + PD E++ MT LS RV +VWFQN R + KK
Sbjct: 78 AKAKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQNSRARQKK 137
Query: 140 RALAMKQQLQQEKDGR 155
+ K + GR
Sbjct: 138 YQGSKKNRTSLSNSGR 153
>gi|121707646|ref|XP_001271898.1| Homeobox domain protein [Aspergillus clavatus NRRL 1]
gi|119400046|gb|EAW10472.1| Homeobox domain protein [Aspergillus clavatus NRRL 1]
Length = 606
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 40/158 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL 142
R + QL TL +N NP P A +E++ + N++ R +++WFQN+R K K K+++
Sbjct: 67 RQRATQDQLVTLEVEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKMLAKKSI 126
Query: 143 -----------AMKQQLQQEKD----------GRKMGYGSMQGIPMVASSP-----VRHD 176
+M+Q L + D GR GYG+ G + S+P + H
Sbjct: 127 ETGEGCDSIPESMRQYLAMQFDPTKAGVRDPFGRTGGYGAT-GAYLSESAPSGKVVIHHF 185
Query: 177 SP----------IGMNALEVTSYQPPWKALSDFALHTD 204
+ IG NA+++ + P KA + ++ D
Sbjct: 186 TCRSLTIGSWRRIGQNAMDLVVFYSPEKACMTYYINND 223
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ G + + R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R
Sbjct: 432 IPGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNAR 491
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASS 171
K R + +KQ+ + +K + GS+ + + +S
Sbjct: 492 A--KWRRMVLKQEGKSDKCDGSVDSGSLGDLELYGNS 526
>gi|324512462|gb|ADY45163.1| LIM/homeobox protein Lhx9 [Ascaris suum]
Length = 258
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
G+ R+RT QL T+++ +N N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 100 GRSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRR 159
Query: 140 RAL 142
+
Sbjct: 160 NTM 162
>gi|256079939|ref|XP_002576241.1| lim homeobox protein [Schistosoma mansoni]
gi|350644840|emb|CCD60434.1| lim homeobox protein,putative [Schistosoma mansoni]
Length = 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG + K R RT+L Q + + NP+P ++E L T L+ RV++VWFQN+R
Sbjct: 77 SGKNSK--RPRTILTANQRRRFKAVFEFNPKPTRKIREALATETGLNIRVVQVWFQNQRA 134
Query: 136 KDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSP-VRHDSPIGM 181
K KK A Q+ +Q+ + R + PM+ + P VR SP M
Sbjct: 135 KIKKLARRHAQESRQQSNRRMLINN-----PMINNEPMVRIQSPNSM 176
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ R+RT QL T++T + N PDA +QL + T LS RV++VWFQN R K
Sbjct: 244 RTKRMRTSFKHHQLRTMKTYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAK---- 299
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALE 185
++ + +++ G+ G G P V S + + + +L+
Sbjct: 300 ---WRRNIMRQEGGQSQGQSQANGPPSVGSGIMGEGNSLSHQSLD 341
>gi|268576445|ref|XP_002643202.1| C. briggsae CBR-LIM-6 protein [Caenorhabditis briggsae]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 127 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK 184
>gi|432889048|ref|XP_004075119.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 357
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+P R RT+L +Q T + + + +P ++E L T LS RV++VWFQN+R K KK
Sbjct: 224 RPKRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKL 283
Query: 141 A--------LAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQP 191
A Q+L+QE M G M+G+ S P+ + P + +E + Y P
Sbjct: 284 ARRQQQQQEQHASQRLRQE-----MISGCMKGLLSSYSGPLPSN-PQHLLMVEPSKYNP 336
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 134 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 189
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 176 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 231
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT + KQL TL+ Y +P+P ++EQL T L RV++VW K+ + KKR
Sbjct: 355 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWRLQKQREKKKR 411
>gi|429859741|gb|ELA34509.1| homeobox transcription factor [Colletotrichum gloeosporioides Nara
gc5]
Length = 592
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT +K + L Y ANP+PD + +V+ +L+ + +++WFQN+R D++++
Sbjct: 67 RKRTAAKDKSI--LENAYLANPKPDKAARLDIVKRVSLNEKEVQIWFQNRRQNDRRKSRP 124
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIG 180
+ Q + + YG MQ +++S P + SP+G
Sbjct: 125 LSAQ-----EIAALRYGGMQ---ILSSDPASYSSPVG 153
>gi|390356846|ref|XP_785118.3| PREDICTED: LIM/homeobox protein Awh-like [Strongylocentrotus
purpuratus]
Length = 335
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K R+RT E+QL L+ +N + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 185 KTKRIRTTFTEEQLEVLQANFNVDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 243
>gi|62955219|ref|NP_001017625.1| diencephalon/mesencephalon homeobox protein 1-B [Danio rerio]
gi|82229939|sp|Q566X8.1|DMX1B_DANRE RecName: Full=Diencephalon/mesencephalon homeobox protein 1-B
gi|62202765|gb|AAH93284.1| Diencephalon/mesencephalon homeobox 1b [Danio rerio]
gi|83779129|gb|ABC47375.1| paired-type homeobox transcription factor Mbx2 [Danio rerio]
gi|182890472|gb|AAI64462.1| Dmbx1b protein [Danio rerio]
Length = 369
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGRKMGY---GSMQGIPMVASSP 172
++ K+QLQ+ K+ G G + P+ A +P
Sbjct: 125 QRSLQKEQLQRLKEAGTEGAQDEGKEEAPPVEAQAP 160
>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
Length = 860
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 73 RKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRV 128
R V GK R +Q+ L YN P+P ++ ++QL++ + N+ P+ I+V
Sbjct: 9 RSVMDASGKYVR----YTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKV 64
Query: 129 WFQNKRCKDKKRALAMK 145
WFQN+RC++K+R A +
Sbjct: 65 WFQNRRCREKQRKEATR 81
>gi|303388753|ref|XP_003072610.1| Homeodomain-containing transcription factor-like protein
[Encephalitozoon intestinalis ATCC 50506]
gi|303301751|gb|ADM11250.1| Homeodomain-containing transcription factor-like protein
[Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
R + QL L + N RPDA M+++L E ++PR ++VWFQN+R K KK L K
Sbjct: 34 RKRTTKAQLKVLEETFETNIRPDANMRKKLGEELGMTPRSVQVWFQNRRAKIKK--LTQK 91
Query: 146 QQLQQE 151
+ +QQE
Sbjct: 92 KMMQQE 97
>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
gi|219886211|gb|ACL53480.1| unknown [Zea mays]
gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
mays]
Length = 854
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ +TN+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 30 EQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRCREKQRRESSRLQ 89
Query: 148 LQQEKDG 154
K G
Sbjct: 90 TVNRKLG 96
>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
polymorpha]
Length = 860
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 73 RKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRV 128
R V GK R +Q+ L YN P+P ++ ++QL++ + N+ P+ I+V
Sbjct: 9 RSVMDASGKYVR----YTNEQVEALERVYNECPKPSSIRRQQLIKDCPILANIEPKQIKV 64
Query: 129 WFQNKRCKDKKRALAMK 145
WFQN+RC++K+R A +
Sbjct: 65 WFQNRRCREKQRKEATR 81
>gi|444721284|gb|ELW62028.1| LIM homeobox transcription factor 1-beta [Tupaia chinensis]
Length = 471
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 99 GSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 158
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 159 VQVWFQNQRAKMKKLA 174
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ G + + R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R
Sbjct: 427 IPGANSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNAR 486
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASS 171
K R + +KQ+ + +K + GS+ + + +S
Sbjct: 487 A--KWRRMVLKQEGKSDKCDGSVDGGSLGDLELYGNS 521
>gi|442630038|ref|NP_001261380.1| arrowhead, isoform D [Drosophila melanogaster]
gi|440215264|gb|AGB94075.1| arrowhead, isoform D [Drosophila melanogaster]
Length = 271
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQ 146
R + KK A+++
Sbjct: 200 RARQKKHIHAVRE 212
>gi|312370934|gb|EFR19232.1| hypothetical protein AND_22855 [Anopheles darlingi]
Length = 919
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS R+++VWFQN+R K
Sbjct: 128 DGRRGPKRPRTILTTQQRRAFKASFDISPKPCRKIREGLAKDTGLSIRIVQVWFQNQRAK 187
Query: 137 DKKRALAMKQQLQQEKDGRK 156
KK Q +Q KDG K
Sbjct: 188 MKKI------QKKQLKDGSK 201
>gi|444519265|gb|ELV12700.1| Diencephalon/mesencephalon homeobox protein 1 [Tupaia chinensis]
Length = 248
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 28 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 87
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 88 QRSLQKEQLQKQKE 101
>gi|358392262|gb|EHK41666.1| hypothetical protein TRIATDRAFT_287108 [Trichoderma atroviride IMI
206040]
Length = 842
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 54 DALMKEQLVEM-TNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMK 112
DAL+ E + E T+ L + K R R L +Q L + + P PDA +
Sbjct: 350 DALLDEDMAEEETDSLLQTTAERVAARRKMKRFR--LTHQQTRFLTSEFAKQPHPDAAHR 407
Query: 113 EQLV-EMTNLSPRVIRVWFQNKRCK-------DKKRALAMKQQLQQEKDGRKMG--YGSM 162
E+L E+ LSPR ++VWFQN+R K D+ R + M+ + + + YG++
Sbjct: 408 ERLSREIPGLSPRQVQVWFQNRRAKIKRLNADDRDRMIKMRAVPDDFDNVQALHSPYGAV 467
Query: 163 QGIPMVASSPV 173
G+P+ + PV
Sbjct: 468 HGMPLPLAQPV 478
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL L++ + A P+P ++E+L + T L+ RVI+VWFQN+R K+++
Sbjct: 157 RTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERR 210
>gi|242003798|ref|XP_002422864.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
gi|212505746|gb|EEB10126.1| LIM/homeobox protein Awh, putative [Pediculus humanus corporis]
Length = 227
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 67 LFLGRVRKVSGGD------GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTN 120
+ L + K GGD K RVRT E+QL L+ + + PD E++ ++T
Sbjct: 80 VLLAILVKDKGGDSEGYHKNKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITG 139
Query: 121 LSPRVIRVWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPI 179
LS RV +VWFQN R + KK K + D G + SP SP+
Sbjct: 140 LSKRVTQVWFQNSRARQKKHLHTGKLKTPSRDDNNTFGRHINLHLTYSFQSPQNAKSPV 198
>gi|189241621|ref|XP_001807690.1| PREDICTED: similar to Zn finger homeodomain 1 CG1322-PB [Tribolium
castaneum]
Length = 851
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DG+ RVR++++++QL L+ Y NPRP E++ + RV++VWFQN R +D+
Sbjct: 547 DGRKVRVRSLISDEQLKVLKDHYKLNPRPKREDLEKIADTIGFPVRVVQVWFQNTRARDR 606
Query: 139 K 139
+
Sbjct: 607 R 607
>gi|355567904|gb|EHH24245.1| LIM/homeobox protein LMX1B [Macaca mulatta]
Length = 367
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 168 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 227
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 228 VQVWFQNQRAKMKKLA 243
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 288 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 347
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 348 VQVWFQNQRAKMKKLA 363
>gi|348501013|ref|XP_003438065.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Oreochromis niloticus]
Length = 390
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++K+
Sbjct: 125 QRSLQKEQLQKQKE 138
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 820 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 879
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 880 VQVWFQNQRAKMKKLA 895
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+L Q + + NP+P ++E L T LS RV++VWFQN+R K KK
Sbjct: 164 PKRPRTILTTSQRRKFKASFEVNPKPCRKIRESLASETGLSVRVVQVWFQNQRAKMKK-- 221
Query: 142 LAMKQ 146
LA KQ
Sbjct: 222 LARKQ 226
>gi|393905176|gb|EFO23802.2| hypothetical protein LOAG_04687 [Loa loa]
Length = 205
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+T + + PD E++ MT LS RV +VWFQN R + KK
Sbjct: 82 AKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQNSRARQKK 141
>gi|170577993|ref|XP_001894217.1| Homeobox domain containing protein [Brugia malayi]
gi|158599257|gb|EDP36927.1| Homeobox domain containing protein [Brugia malayi]
Length = 452
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+T + + PD E++ MT LS RV +VWFQN R + KK
Sbjct: 329 AKTKRVRTTFAEEQLAVLQTHFQIDSNPDGADLERIATMTGLSKRVTQVWFQNSRARQKK 388
>gi|47215984|emb|CAF96386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 353
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 66 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 125
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 126 QRSLQKEQLQKQKEA 140
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|170034020|ref|XP_001844873.1| arrowhead [Culex quinquefasciatus]
gi|167875281|gb|EDS38664.1| arrowhead [Culex quinquefasciatus]
Length = 304
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ +N + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 149 KSKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKK 207
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 74 KVSGGDGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
K +GGDG+ P R RT+L Q + + + +P ++E L T LS RV++VWFQ
Sbjct: 207 KGNGGDGRKGPKRPRTILTTAQRRAFKQSFEVSQKPCRKVRESLAADTGLSVRVVQVWFQ 266
Query: 132 NKRCKDKKRALAMKQQLQQEKDG 154
N+R K KK Q+ Q DG
Sbjct: 267 NQRAKMKKIQRRQLQEQGQNTDG 289
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 439 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 498
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 499 VQVWFQNQRAKMKKLA 514
>gi|17945534|gb|AAL48819.1| RE24382p [Drosophila melanogaster]
Length = 275
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDDQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
Length = 837
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 22 EQVEALERLYNDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 81
Query: 148 LQQEK 152
K
Sbjct: 82 TVNRK 86
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 580 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 639
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 640 VQVWFQNQRAKMKKLA 655
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQNKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|453087536|gb|EMF15577.1| hypothetical protein SEPMUDRAFT_147420 [Mycosphaerella populorum
SO2202]
Length = 712
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQ 150
+ QL TL +N NP P AL++E++ + N++ R +++WFQN+R K K A K+ ++
Sbjct: 70 QDQLMTLEVEFNKNPTPTALVRERIAQEINMTERSVQIWFQNRRAKIKNIA---KRSIEN 126
Query: 151 EKDGRKMGYGSMQGIPMVASSPVRHDSP 178
+D + Q + M A +P + SP
Sbjct: 127 GEDCDSIPESMRQYLAMQAYAPGKGLSP 154
>gi|258504133|gb|ACV72766.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 151 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK-- 208
Query: 142 LAMKQQLQQEKDGRKMGYGSM-QGIPMVASSPVRHDSPIGMNALEVTS 188
M ++ D K G GS + + SS +S I ++ ++ S
Sbjct: 209 --MNKKDSDSADTFKHGPGSEGRSTEDIRSSDDEEESIINLDGDDMES 254
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 178 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 237
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 238 VQVWFQNQRAKMKKLA 253
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|402588476|gb|EJW82409.1| goosecoid [Wuchereria bancrofti]
Length = 236
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 64 MTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSP 123
+ N F+ G + R RT+ +E+QL L + PD +++E+L +L
Sbjct: 94 INNGFITSFHPFHYGSKRKRRHRTIFSEEQLQILENAFQGTHYPDVMLREKLAVQCDLKE 153
Query: 124 RVIRVWFQNKRCKDKKRALAMKQQLQQEKDGR 155
+ VWF+N+R KD+K+ K+++ KDGR
Sbjct: 154 ERVEVWFKNRRAKDRKQ----KREIDT-KDGR 180
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|256077038|ref|XP_002574815.1| omeobox protein aristaless-related [Schistosoma mansoni]
gi|350646462|emb|CCD58861.1| omeobox protein aristaless-related [Schistosoma mansoni]
Length = 167
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
+P R+RT QLHTL T + N PD ++QL NLS ++VWFQN+R K
Sbjct: 2 RPRRLRTTFTTYQLHTLETSFLLNQYPDVAARDQLASQLNLSDGRVQVWFQNRRAK 57
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
+P R+RT QLHTL T + N PD ++QL NL GRV+
Sbjct: 2 RPRRLRTTFTTYQLHTLETSFLLNQYPDVAARDQLASQLNLSDGRVQ 48
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 193 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 252
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 253 VQVWFQNQRAKMKKLA 268
>gi|47194703|emb|CAF87132.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 199 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 258
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 259 VQVWFQNQRAKMKKLA 274
>gi|358336024|dbj|GAA54597.1| LIM homeobox transcription factor 1-beta [Clonorchis sinensis]
Length = 412
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG R RT+L Q ++ + NP+P ++E L T L+ RV++VWFQN+R
Sbjct: 126 SGSGKNSKRPRTILTSSQRRRFKSVFEMNPKPARKLRETLASETGLNIRVVQVWFQNQRA 185
Query: 136 KDKKRALAMKQQ 147
K KK A Q+
Sbjct: 186 KMKKLARRQAQE 197
>gi|157134682|ref|XP_001663345.1| arrowhead [Aedes aegypti]
gi|108870378|gb|EAT34603.1| AAEL013168-PA, partial [Aedes aegypti]
Length = 306
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ +N + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 147 KTKRVRTTFTEEQLQILQANFNIDSNPDGQDLERIASVTGLSKRVTQVWFQNSRARQKK 205
>gi|196166483|gb|ACG70800.1| Pitx [Convolutriloba longifissura]
Length = 600
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT +QL L T + N PD +E++ TNL +R+WF+N+R K +K+
Sbjct: 385 RQRTHFTSQQLQELETLFARNRYPDMATREEISAWTNLPEAKVRIWFKNRRAKWRKKE-- 442
Query: 144 MKQQLQQEKDGRKMGYGSM 162
+ QLQ+ K+ G M
Sbjct: 443 -RNQLQEYKNAAAFGMNFM 460
>gi|308489722|ref|XP_003107054.1| CRE-LIM-6 protein [Caenorhabditis remanei]
gi|308252942|gb|EFO96894.1| CRE-LIM-6 protein [Caenorhabditis remanei]
Length = 314
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 184 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK 241
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|258504135|gb|ACV72767.1| LIM-6 [Caenorhabditis remanei]
gi|258504137|gb|ACV72768.1| LIM-6 [Caenorhabditis remanei]
gi|258504139|gb|ACV72769.1| LIM-6 [Caenorhabditis remanei]
gi|258504141|gb|ACV72770.1| LIM-6 [Caenorhabditis remanei]
gi|258504143|gb|ACV72771.1| LIM-6 [Caenorhabditis remanei]
gi|258504147|gb|ACV72773.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 151 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK-- 208
Query: 142 LAMKQQLQQEKDGRKMGYGSM-QGIPMVASSPVRHDSPIGMNALEVTS 188
M ++ D K G GS + + SS +S I ++ ++ S
Sbjct: 209 --MNKKDSDSTDTFKHGPGSEGRSTEDIRSSDDEEESIINLDGDDMES 254
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+ G + + R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R
Sbjct: 497 IPGSNSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNAR 556
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASS 171
K R + +KQ+ + +K + GS+ + + +S
Sbjct: 557 --AKWRRMVLKQEGKSDKCDGSVDGGSLGDLELYGNS 591
>gi|384488144|gb|EIE80324.1| hypothetical protein RO3G_05029 [Rhizopus delemar RA 99-880]
Length = 413
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 46/68 (67%)
Query: 83 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRAL 142
TR RT L+ +Q+ L + +N N PD+ ++ +L + +++ R +++WFQN+R K+KK +
Sbjct: 4 TRKRTHLSTEQVSLLESSFNENSLPDSAVRSRLAQELSVTERTVQIWFQNRRAKEKKIKI 63
Query: 143 AMKQQLQQ 150
+++Q Q+
Sbjct: 64 RLEKQSQK 71
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|258504145|gb|ACV72772.1| LIM-6 [Caenorhabditis remanei]
Length = 263
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 151 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK 208
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 199 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 258
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 259 VQVWFQNQRAKMKKLA 274
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 184 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 243
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 244 VQVWFQNQRAKMKKLA 259
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>gi|170586966|ref|XP_001898250.1| LIM homeobox transcription factor 1 alpha [Brugia malayi]
gi|158594645|gb|EDP33229.1| LIM homeobox transcription factor 1 alpha, putative [Brugia malayi]
Length = 177
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q + + +P ++EQL + TNLS RV++VWFQN+R K KK
Sbjct: 44 PKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVRVVQVWFQNQRAKMKK-- 101
Query: 142 LAMKQQLQQ 150
+ KQ++ +
Sbjct: 102 IQRKQEVSE 110
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 209 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 268
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 269 VQVWFQNQRAKMKKLA 284
>gi|170586684|ref|XP_001898109.1| Homeobox protein ceh-14 [Brugia malayi]
gi|158594504|gb|EDP33088.1| Homeobox protein ceh-14, putative [Brugia malayi]
Length = 319
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ K L TL+ Y A+ +P ++EQL T L RV++VWFQN+R K+K
Sbjct: 144 DSNTKRPRTTISAKSLETLKQAYQASSKPARHVREQLAADTGLDMRVVQVWFQNRRAKEK 203
Query: 139 K 139
+
Sbjct: 204 R 204
>gi|29500723|gb|AAO74860.1| LMX1B [Canis lupus familiaris]
Length = 309
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 121 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 180
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 181 VQVWFQNQRAKMKKLA 196
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 74 KVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
+VS GK RT + KQL L+ + +N +P ++EQL T L+ RVI+VWFQN+
Sbjct: 238 QVSTTTGKRRGPRTTIKSKQLDILKAAFKSNQKPTRNIREQLATETGLNMRVIQVWFQNR 297
Query: 134 RCKDKK 139
R K+++
Sbjct: 298 RSKERR 303
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 209 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 268
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 269 VQVWFQNQRAKMKKLA 284
>gi|402592128|gb|EJW86057.1| hypothetical protein WUBG_03029, partial [Wuchereria bancrofti]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
P R RT+LN +Q + + +P ++EQL + TNLS RV++VWFQN+R K KK
Sbjct: 86 PKRPRTILNTQQRKAFKLAFEKTSKPCRKVREQLAKETNLSVRVVQVWFQNQRAKMKK-- 143
Query: 142 LAMKQQLQQEKD 153
+ KQ++ + D
Sbjct: 144 IQRKQEVPEAND 155
>gi|339236721|ref|XP_003379915.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
gi|316977365|gb|EFV60475.1| LIM/homeobox protein Lhx3 [Trichinella spiralis]
Length = 262
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ KQL TL+ Y +P+P ++E+L T L RV++VWFQN+R K+K
Sbjct: 74 DNSNKRPRTTISAKQLETLKHAYQLSPKPARHVRERLALDTGLDMRVVQVWFQNRRAKEK 133
Query: 139 K 139
+
Sbjct: 134 R 134
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 209 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 268
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 269 VQVWFQNQRAKMKKLA 284
>gi|270000858|gb|EEZ97305.1| hypothetical protein TcasGA2_TC011114 [Tribolium castaneum]
Length = 779
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
DG+ RVR++++++QL L+ Y NPRP E++ + RV++VWFQN R +D+
Sbjct: 475 DGRKVRVRSLISDEQLKVLKDHYKLNPRPKREDLEKIADTIGFPVRVVQVWFQNTRARDR 534
Query: 139 K 139
+
Sbjct: 535 R 535
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 424 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 483
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 484 VQVWFQNQRAKMKKLA 499
>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
Length = 844
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
G + K DGK R +Q+ L Y P+P +L ++QL+ + N+ P+
Sbjct: 14 GSINKHLTDDGKYVR----YTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQ 69
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEK 152
I+VWFQN+RC++K+R + + Q K
Sbjct: 70 IKVWFQNRRCREKQRKESSRLQTVNRK 96
>gi|229619794|dbj|BAH58095.1| LIM homeodomain protein [Halocynthia roretzi]
Length = 521
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L++ + A P+P +EQL + T LS RVI+VWFQN+R K+++ MK
Sbjct: 280 RTTIKAKQLDMLKSAFIATPKPTRHRREQLAKDTGLSMRVIQVWFQNRRSKERR----MK 335
Query: 146 Q 146
Q
Sbjct: 336 Q 336
>gi|198413993|ref|XP_002122079.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 387
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL TL+ + + P+P ++E+L + T LS RVI+VWFQN+R K+++
Sbjct: 219 RTTIKAKQLETLKNAFLSTPKPTRHIREKLAQDTGLSMRVIQVWFQNRRSKERR 272
>gi|307182931|gb|EFN69941.1| LIM/homeobox protein Awh [Camponotus floridanus]
Length = 258
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R +
Sbjct: 107 GGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQ 166
Query: 138 KK 139
KK
Sbjct: 167 KK 168
>gi|402072300|gb|EJT68149.1| homeoprotein [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 625
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQ 150
+ QL TL +N NP P AL++E++ E N++ R +++WFQN+R K K L K+ L+
Sbjct: 85 QDQLTTLEMEFNKNPTPAALVRERIAEEINMTERSVQIWFQNRRAKIK---LMAKKSLET 141
Query: 151 EKD 153
+D
Sbjct: 142 GED 144
>gi|70570095|dbj|BAE06535.1| transcription factor protein [Ciona intestinalis]
Length = 386
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL TL+ + + P+P ++E+L + T LS RVI+VWFQN+R K+++
Sbjct: 218 RTTIKAKQLETLKNAFLSTPKPTRHIREKLAQDTGLSMRVIQVWFQNRRSKERR 271
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 32 RTVLNEKQLHTLRTCYN---ANPRPDALMKEQLVEMTNLFL-GRV--RKVSGGD---GKP 82
R VL E QL R Y+ A+P K + GR+ RKV D +P
Sbjct: 116 RCVLREGQLLCAREGYHQCLASPSSSETGKSDDEDEEVEEESGRITGRKVKSDDVESKRP 175
Query: 83 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRA 141
R RT+L +Q T + + + +P ++E L T LS RV++VWFQN+R K KK A
Sbjct: 176 KRPRTILTTQQRRTFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLA 234
>gi|440797423|gb|ELR18510.1| homeobox domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 655
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R +N +QL L C+ +P P+ L K +L E +SP+ +++WFQNKR + KK
Sbjct: 522 RKRVNAQQLAVLEECFAVDPMPNTLAKLKLAETLGMSPKRVQIWFQNKRARLKK 575
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 130 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 185
>gi|159164230|pdb|2DMQ|A Chain A, Solution Structure Of The Homeobox Domain Of LimHOMEOBOX
Protein Lhx9
Length = 80
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG GK R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R
Sbjct: 3 SGSSGK--RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARA 60
Query: 136 KDKKRAL 142
K ++ L
Sbjct: 61 KFRRNLL 67
>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
Length = 846
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 40 EQVEALERVYAECPKPSSLKRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 99
Query: 148 LQQEK 152
+ K
Sbjct: 100 MVNRK 104
>gi|322787264|gb|EFZ13400.1| hypothetical protein SINV_02203 [Solenopsis invicta]
Length = 333
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R +
Sbjct: 182 GGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQ 241
Query: 138 KK 139
KK
Sbjct: 242 KK 243
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG + K RT + +QL L+ + P+P L++E+L + T L+ RVI+VWFQN+R
Sbjct: 172 SGNNCKKRGPRTTIKTEQLEMLKNAFAITPKPTRLIRERLAQQTGLNMRVIQVWFQNRRS 231
Query: 136 KDKK 139
K+++
Sbjct: 232 KERR 235
>gi|431892642|gb|ELK03075.1| Pituitary homeobox 1, partial [Pteropus alecto]
Length = 257
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 17/149 (11%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + N PD M+E++ TNL+ +RVWF+N+R K +KR
Sbjct: 32 KQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKR 91
Query: 141 ALAMKQQL---------------QQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALE 185
QQL Q +D GY +A +P+ S N++
Sbjct: 92 --ERNQQLDLCKGGYVPQFSGLVQPYEDVYAAGYNYNWATKSLAPAPLSTKSFTFFNSMS 149
Query: 186 VTSYQPPWKALSDFALHTDLDRLDPSAAP 214
S Q + A S + T + P A P
Sbjct: 150 PLSSQSMFSAPSSISSMTMPSSMGPGAVP 178
>gi|340714415|ref|XP_003395724.1| PREDICTED: short stature homeobox protein 2-like [Bombus
terrestris]
Length = 384
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
R G+GK R RT +QL L ++ PDA M+E+L + LS ++VWFQ
Sbjct: 180 CRNSGNGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 239
Query: 132 NKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQP 191
N+R K +K + + L K +G G+ + SP P + V Y P
Sbjct: 240 NRRAKCRKHESQLHKGLAITKR-----FGVAGGMVLAPRSP-----PATLEPCRVAPYLP 289
Query: 192 PWK 194
+
Sbjct: 290 ALR 292
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 414 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 473
Query: 137 DKKRALAMKQQLQQEKDGRKMG 158
KK KQ +GR G
Sbjct: 474 MKKIQRKAKQNGGTTTNGRGNG 495
>gi|169771627|ref|XP_001820283.1| homeobox transcription factor (RfeB) [Aspergillus oryzae RIB40]
gi|83768142|dbj|BAE58281.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871761|gb|EIT80918.1| homeobox transcription factor [Aspergillus oryzae 3.042]
Length = 605
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 40/158 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL 142
R + QL TL +N NP P A +E++ + N++ R +++WFQN+R K K K+++
Sbjct: 64 RQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKMLAKKSI 123
Query: 143 -----------AMKQQLQQEKD----------GRKMGYGSMQGIPMVASSP-----VRHD 176
+M+Q L + D GR GYG+ P S+P + H
Sbjct: 124 ETGEGCDSIPESMRQYLAMQFDPSKPGARDPFGRTGGYGTSGAYP-SESTPSGKVVIHHF 182
Query: 177 SP----------IGMNALEVTSYQPPWKALSDFALHTD 204
+ IG NA+++ + P KA + ++ D
Sbjct: 183 TCRSLTIGSWRRIGQNAMDLVVFYSPEKACMTYYINND 220
>gi|238485794|ref|XP_002374135.1| homeobox transcription factor (RfeB), putative [Aspergillus flavus
NRRL3357]
gi|220699014|gb|EED55353.1| homeobox transcription factor (RfeB), putative [Aspergillus flavus
NRRL3357]
Length = 604
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 40/158 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL 142
R + QL TL +N NP P A +E++ + N++ R +++WFQN+R K K K+++
Sbjct: 63 RQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKMLAKKSI 122
Query: 143 -----------AMKQQLQQEKD----------GRKMGYGSMQGIPMVASSP-----VRHD 176
+M+Q L + D GR GYG+ P S+P + H
Sbjct: 123 ETGEGCDSIPESMRQYLAMQFDPSKPGARDPFGRTGGYGTSGAYP-SESTPSGKVVIHHF 181
Query: 177 SP----------IGMNALEVTSYQPPWKALSDFALHTD 204
+ IG NA+++ + P KA + ++ D
Sbjct: 182 TCRSLTIGSWRRIGQNAMDLVVFYSPEKACMTYYINND 219
>gi|392925295|ref|NP_001256981.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
gi|351020894|emb|CCD62867.1| Protein LIM-6, isoform a [Caenorhabditis elegans]
Length = 310
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 82 PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
P R RT+LN +Q +T + + +P ++EQL T LS RV++VWFQN+R K KK
Sbjct: 186 PKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQVWFQNQRAKIKK 243
>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
transcription factor HOX32; AltName: Full=OsHox32
gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
Length = 859
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 73 RKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
R GG G P T +Q+ L Y P+P +L ++QL+ ++N+ P+
Sbjct: 17 RSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQ 76
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEK 152
I+VWFQN+RC++K+R A + Q K
Sbjct: 77 IKVWFQNRRCREKQRKEASRLQTVNRK 103
>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
transcription factor HOX32; AltName: Full=OsHox32
gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
Group]
gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 859
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 73 RKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
R GG G P T +Q+ L Y P+P +L ++QL+ ++N+ P+
Sbjct: 17 RSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQ 76
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEK 152
I+VWFQN+RC++K+R A + Q K
Sbjct: 77 IKVWFQNRRCREKQRKEASRLQTVNRK 103
>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
max]
Length = 845
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 74 KVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVW 129
KV+ +GK R +Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VW
Sbjct: 13 KVALDNGKYVR----YTPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVW 68
Query: 130 FQNKRCKDKKRALAMKQQLQQEK 152
FQN+RC++K+R A + Q K
Sbjct: 69 FQNRRCREKQRKEASRLQAVNRK 91
>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
transcription factor ATHB-14; AltName: Full=Protein
PHABULOSA
gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
Length = 852
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAARLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
max]
Length = 844
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 74 KVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVW 129
KV+ +GK R +Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VW
Sbjct: 13 KVALDNGKYVRY----TPEQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVW 68
Query: 130 FQNKRCKDKKRALAMKQQLQQEK 152
FQN+RC++K+R A + Q K
Sbjct: 69 FQNRRCREKQRKEASRLQAVNRK 91
>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
mays]
Length = 174
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Query: 70 GRVRKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLS 122
G+ R GG G P T +Q+ L Y+ P+P +L ++QL+ ++N+
Sbjct: 11 GKDRPSPGGGGAPQVDTGKYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
Query: 123 PRVIRVWFQNKRCKDKKRALAMKQQ 147
P+ I+VWFQN+RC++K+R A + Q
Sbjct: 71 PKQIKVWFQNRRCREKQRKEASRLQ 95
>gi|52355818|gb|AAH82769.1| Zfhx3 protein [Mus musculus]
Length = 948
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 162 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 221
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 222 VWFQNARAKEKKSKLSMAKHF 242
>gi|345324971|ref|XP_001508423.2| PREDICTED: hypothetical protein LOC100077160 [Ornithorhynchus
anatinus]
Length = 352
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 74 KVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
K SG +GK P R RT+L +Q + + + +P ++E L T LS RV++VW
Sbjct: 111 KGSGEEGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVW 170
Query: 130 FQNKRCKDKKRA 141
FQN+R K KK A
Sbjct: 171 FQNQRAKMKKLA 182
>gi|312074868|ref|XP_003140163.1| Lhx2 protein [Loa loa]
gi|307764674|gb|EFO23908.1| Lhx2 protein [Loa loa]
Length = 372
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ +N N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 212 KSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRRN 271
Query: 141 ALAMKQ 146
++ ++
Sbjct: 272 SIQCRE 277
>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
lyrata]
gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
lyrata]
Length = 859
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 39 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAARLQ 98
Query: 148 LQQEK 152
K
Sbjct: 99 TVNRK 103
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 86 RTVLNEKQLHTL-RTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAM 144
RT + KQL TL + + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ M
Sbjct: 184 RTTIKAKQLETLLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----M 239
Query: 145 KQ 146
KQ
Sbjct: 240 KQ 241
>gi|354507888|ref|XP_003515986.1| PREDICTED: LIM homeobox transcription factor 1-beta-like, partial
[Cricetulus griseus]
Length = 243
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 136 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 195
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 196 VQVWFQNQRAKMKKLA 211
>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 880
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++Q++ + N+ P+ I+VWFQN+RC++K+R + + Q
Sbjct: 59 EQVEALERVYNECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCREKQRKESSRMQ 118
Query: 148 LQQEK 152
K
Sbjct: 119 TVNRK 123
>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
kraussiana]
Length = 820
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 71 RVRKVSGGD---GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSP 123
R+ K GGD GK R +Q+ L Y+ P+P ++ ++Q+V + N+ P
Sbjct: 2 RMTKDKGGDLDSGKYIR----YTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEP 57
Query: 124 RVIRVWFQNKRCKDKKR 140
R I+VWFQN+RC++K+R
Sbjct: 58 RQIKVWFQNRRCREKQR 74
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 262
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 263 VQVWFQNQRAKMKKLA 278
>gi|328925126|dbj|BAK19078.1| apterous B beta [Bombyx mori]
Length = 159
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
VS + R+RT QL T+++ + N PDA +QL + T LS RV++VWFQN R
Sbjct: 38 VSSHTQRTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNAR 97
Query: 135 CKDKKRALAMKQQLQQEKDG 154
K + + ++QE +G
Sbjct: 98 AKWR------RNMMRQETNG 111
>gi|432872837|ref|XP_004072149.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oryzias latipes]
Length = 346
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT +QL ++T + + PDA ++L EMT LS RVI+VWFQN R + KK+
Sbjct: 219 RARTSFTSEQLQVMQTQFAQDNNPDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKKQ 275
>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
Length = 825
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+Q+ L YN P+P ++ ++QL+ + N+ PR I+VWFQN+RC++K+R
Sbjct: 9 EQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQR 61
>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
Length = 820
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 71 RVRKVSGGD---GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSP 123
R+ K GGD GK R +Q+ L Y+ P+P ++ ++Q+V + N+ P
Sbjct: 2 RMTKDKGGDLDSGKYIR----YTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEP 57
Query: 124 RVIRVWFQNKRCKDKKR 140
R I+VWFQN+RC++K+R
Sbjct: 58 RQIKVWFQNRRCREKQR 74
>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
transcription factor HOX33; AltName: Full=OsHox33
gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
transcription factor HOX33; AltName: Full=OsHox33
gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
Length = 855
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 36 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
Query: 148 LQQEK 152
K
Sbjct: 96 TVNRK 100
>gi|332022452|gb|EGI62760.1| Paired mesoderm homeobox protein 2 [Acromyrmex echinatior]
Length = 249
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
+ G+ +P R RT + +QL L + PDA ++E+L +LS ++VWFQN+R
Sbjct: 50 TAGNRRPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLSEARVQVWFQNRRA 109
Query: 136 KDKK--RALAMKQ 146
K ++ R+ AM +
Sbjct: 110 KFRRNERSSAMSR 122
>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
kraussiana]
Length = 840
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+Q+ L YN P+P ++ ++QL+ + N+ PR I+VWFQN+RC++K+R
Sbjct: 24 EQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREKQR 76
>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
Length = 821
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+QL L YN P+P +L ++QL++ + N++P+ ++VWFQN+RC++K+R
Sbjct: 13 EQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65
>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
moellendorffii]
Length = 812
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+QL L YN P+P +L ++QL++ + N++P+ ++VWFQN+RC++K+R
Sbjct: 13 EQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65
>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
Length = 820
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 71 RVRKVSGGD---GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSP 123
R+ K GGD GK R +Q+ L Y+ P+P ++ ++Q+V + N+ P
Sbjct: 2 RMTKDKGGDLDSGKYIR----YTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANIEP 57
Query: 124 RVIRVWFQNKRCKDKKR 140
R I+VWFQN+RC++K+R
Sbjct: 58 RQIKVWFQNRRCREKQR 74
>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
Length = 855
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+Q+ L YN P+P ++ ++QL+ + N+ PR I+VWFQN+RC++K+R
Sbjct: 25 EQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREKQR 77
>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
Length = 855
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 36 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 95
Query: 148 LQQEK 152
K
Sbjct: 96 TVNRK 100
>gi|260829651|ref|XP_002609775.1| retinal homeobox protein-like protein [Branchiostoma floridae]
gi|229295137|gb|EEN65785.1| retinal homeobox protein-like protein [Branchiostoma floridae]
Length = 320
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG +P R RT Q+H L Y+ P PD M+E+L L+ I+VWFQN+R
Sbjct: 140 SGKMCRPRRNRTTFTTFQIHELELAYDRTPYPDLSMREELANKLELTEARIQVWFQNRRA 199
Query: 136 KDKKR 140
K +++
Sbjct: 200 KTRRQ 204
>gi|291240697|ref|XP_002740254.1| PREDICTED: LIM class homeodomain transcription factor, Lhx6/8
subclass-like [Saccoglossus kowalevskii]
Length = 283
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RVRT E+QL L+ +N + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 168 RVRTTFTEEQLQVLQANFNVDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 223
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 46/194 (23%)
Query: 77 GGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
G DGK P R RT+L +Q + + + +P ++E L T LS RV++VWFQN
Sbjct: 208 GDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 267
Query: 133 KRCKDKKRALAMKQQLQQEKD---GRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
+R K KK A +QQ +Q+ G+++ M+G+ MN+ T
Sbjct: 268 QRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRMEGM---------------MNSF--TPL 310
Query: 190 QPPWKALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAHPDS 249
PP + L +D+ S PFQ G PP PGD +P
Sbjct: 311 APPQQQL------VAMDQNGYSTDPFQ------------QGLTPPQ----MPGDHMNPYG 348
Query: 250 TDSYVTYLESDDSL 263
DS ++SD SL
Sbjct: 349 NDSAFHDIDSDTSL 362
>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
Length = 855
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+Q+ L YN P+P ++ ++QL+ + N+ PR I+VWFQN+RC++K+R
Sbjct: 25 EQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREKQR 77
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVR 86
K R RT QL L + PD L ++ G +++ K R R
Sbjct: 220 KQRRYRTTFTSYQLEELERAFQKTHYPDVFTSVCLSAGSDTEEGMLKR------KQRRYR 273
Query: 87 TVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQ 146
T QL L + PD +E+L +L+ ++VWFQN+R K +KR A Q
Sbjct: 274 TTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQ 333
>gi|297595306|gb|ADI48168.1| Pitx [Crepidula fornicata]
Length = 369
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 70 GRVRKVSG-GDGKPTRVR---TVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G+V + +G GDGK R R T +QL L + N PD +E++ TNLS
Sbjct: 118 GKVDENNGEGDGKKKRQRRQRTHFTSQQLQELEATFARNRYPDMATREEISAWTNLSEAR 177
Query: 126 IRVWFQNKRCKDKKRALAMK 145
+RVWF+N+R K +KR M+
Sbjct: 178 VRVWFKNRRAKWRKRERNME 197
>gi|242023959|ref|XP_002432398.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212517821|gb|EEB19660.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 305
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
G+ R+RT QL T+++ ++ N PDA +QL + T+L RV++VWFQN R K
Sbjct: 188 GRSKRMRTSFKHHQLRTMKSYFSINHNPDAKDLKQLSQKTSLPKRVLQVWFQNARA--KW 245
Query: 140 RALAMKQQLQQEK 152
R + +KQ+ + +K
Sbjct: 246 RRMMVKQEGKSDK 258
>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
Full=HD-ZIP protein REV; AltName: Full=Homeodomain
transcription factor REV; AltName: Full=Protein
AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
INTERFASCICULAR FIBERLESS 1
gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
[Arabidopsis thaliana]
gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ P+ I+VWFQN+RC+DK+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQRKEASRLQ 91
>gi|410913197|ref|XP_003970075.1| PREDICTED: zinc finger homeobox protein 3-like [Takifugu rubripes]
Length = 3640
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 73 RKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWF 130
R + GGD +P R RT + QL L++C+N P L E L L RV++VWF
Sbjct: 2861 RIIDGGD-RPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGSDIGLPKRVVQVWF 2919
Query: 131 QNKRCKDKKRALAMKQQL 148
QN R K+KK L M +
Sbjct: 2920 QNARAKEKKAKLNMAKHF 2937
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + QL L+ ++AN P EQL + +L RVI VWFQN R K +K
Sbjct: 2179 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLSLPTRVIVVWFQNARQKARKN----- 2233
Query: 146 QQLQQEKDGRKMG 158
+ + DG K G
Sbjct: 2234 --YENQGDGAKEG 2244
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M E + L RV++VWFQN R +++K
Sbjct: 2573 RLRTTITPEQLEILYQKYLLDSNPTRKMLEHIAHEVGLKKRVVQVWFQNTRARERK 2628
>gi|158296015|ref|XP_316574.4| AGAP006536-PA [Anopheles gambiae str. PEST]
gi|157016309|gb|EAA11386.5| AGAP006536-PA [Anopheles gambiae str. PEST]
Length = 291
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 175 KSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 233
>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
Length = 778
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+QL L YN P+P +L ++QL++ + N++P+ ++VWFQN+RC++K+R
Sbjct: 13 EQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREKQR 65
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 46/194 (23%)
Query: 77 GGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
G DGK P R RT+L +Q + + + +P ++E L T LS RV++VWFQN
Sbjct: 208 GDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQN 267
Query: 133 KRCKDKKRALAMKQQLQQEKD---GRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSY 189
+R K KK A +QQ +Q+ G+++ M+G+ MN+ T
Sbjct: 268 QRAKMKKLARRQQQQQEQQNSQRLGQEVMSNRMEGM---------------MNSF--TPL 310
Query: 190 QPPWKALSDFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAHPDS 249
PP + L +D+ S PFQ G PP PGD +P
Sbjct: 311 APPQQQL------VTMDQNGYSTDPFQ------------QGLTPPQ----MPGDHMNPYG 348
Query: 250 TDSYVTYLESDDSL 263
DS ++SD SL
Sbjct: 349 NDSAFHDIDSDTSL 362
>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
transcription factor ATHB-8
gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
Length = 833
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 22 EQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 81
Query: 148 LQQEK 152
K
Sbjct: 82 AVNRK 86
>gi|391341454|ref|XP_003745045.1| PREDICTED: LIM/homeobox protein Lhx9-like [Metaseiulus
occidentalis]
Length = 343
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G + R+RT QL T++T + N PDA +QL + T LS RV++VWFQN R K
Sbjct: 236 GQQRTKRMRTSFKHHQLRTMKTYFGINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKW 295
Query: 138 KKRAL 142
++ L
Sbjct: 296 RRNNL 300
>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
distachyon]
Length = 861
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 77 GGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVW 129
GG G P T +Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VW
Sbjct: 24 GGGGAPQVDTGKYVRYTPEQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 83
Query: 130 FQNKRCKDKKRALAMKQQLQQEK 152
FQN+RC++K+R A + Q K
Sbjct: 84 FQNRRCREKQRKEASRLQTVNRK 106
>gi|307195464|gb|EFN77350.1| LIM/homeobox protein Awh [Harpegnathos saltator]
Length = 291
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R +
Sbjct: 141 GGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQ 200
Query: 138 KK 139
KK
Sbjct: 201 KK 202
>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 21 EQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 80
Query: 148 LQQEK 152
K
Sbjct: 81 AVNRK 85
>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
lyrata]
gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
lyrata]
Length = 844
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ P+ I+VWFQN+RC+DK+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQRKEASRLQ 91
>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|405963382|gb|EKC28959.1| Uncharacterized protein C3orf32 [Crassostrea gigas]
Length = 1064
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 67 LFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
LF R G K R RT +QL TL + PD +M+E+L MTNL I
Sbjct: 777 LFEARF----GCQRKQRRCRTAFTNQQLSTLEKTFAKTHYPDVVMRERLAMMTNLPEARI 832
Query: 127 RVWFQNKRCKDKKR 140
+VWF+N+R K +K+
Sbjct: 833 QVWFKNRRAKYRKK 846
>gi|301616353|ref|XP_002937624.1| PREDICTED: zinc finger homeobox protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 3703
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 77 GGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
G+ +P R RT + QL L++C+N P L E L L RV++VWFQN R
Sbjct: 2999 SGEDRPGQKRFRTQMTNLQLKLLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNAR 3058
Query: 135 CKDKKRALAMKQQL 148
KDKK L+M +
Sbjct: 3059 AKDKKSKLSMAKHF 3072
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2307 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2360
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E N G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2677 LKRKLEEKANASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2736
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2737 IAHEVGLKKRVVQVWFQNTRARERK 2761
>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
menziesii]
Length = 842
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYSECPKPSSLRRQQLIRECPMLSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|56694838|gb|AAW23081.1| Lim1, partial [Oikopleura dioica]
Length = 272
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ + A P+P M+E+L T LS RVI+VWFQN+R K+++ MK
Sbjct: 159 RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQVWFQNRRSKERR----MK 214
Query: 146 QQLQ----------------------QEKDGRKMGYGSMQGIPM 167
Q Q Q++ G +M Y +M G+P+
Sbjct: 215 QIKQCDLSKRMYSTEADFHYQAMMSSQDQFGAEMAYANM-GMPI 257
>gi|221119371|ref|XP_002160816.1| PREDICTED: homeobox protein aristaless-like isoform 1 [Hydra
magnipapillata]
Length = 239
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 73 RKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
++ S G K R RT + QL L ++ PD M+E+L +L+ ++VWFQN
Sbjct: 41 QRFSNGKRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQN 100
Query: 133 KRCKDKKRALAMKQQLQQEKDG 154
+R K +KR + + Q++ G
Sbjct: 101 RRAKWRKRE-KLSYNVHQQQHG 121
>gi|172087190|ref|XP_001913137.1| LIM 5 [Oikopleura dioica]
gi|18029264|gb|AAL56442.1| LIM 5-like protein [Oikopleura dioica]
Length = 327
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ + A P+P M+E+L T LS RVI+VWFQN+R K+++ MK
Sbjct: 159 RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQVWFQNRRSKERR----MK 214
Query: 146 QQLQ----------------------QEKDGRKMGYGSMQGIPM 167
Q Q Q++ G +M Y +M G+P+
Sbjct: 215 QIKQCDLSKRMYSTEADFHYQAMMSSQDQFGAEMAYANM-GMPI 257
>gi|313221147|emb|CBY31973.1| unnamed protein product [Oikopleura dioica]
gi|313242468|emb|CBY34611.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ + A P+P M+E+L T LS RVI+VWFQN+R K+++ MK
Sbjct: 168 RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQVWFQNRRSKERR----MK 223
Query: 146 QQLQ----------------------QEKDGRKMGYGSMQGIPM 167
Q Q Q++ G +M Y +M G+P+
Sbjct: 224 QIKQCDLSKRMYSTEADFHYQAMMSSQDQFGAEMAYANM-GMPI 266
>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
Length = 845
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 74 KVSGGD-GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRV 128
K SG D GK R +Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+V
Sbjct: 10 KFSGMDQGKYVR----YTAEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKV 65
Query: 129 WFQNKRCKDKKRALAMKQQLQQEK 152
WFQN+RC++K+R A + Q K
Sbjct: 66 WFQNRRCREKQRKEASRLQAVNRK 89
>gi|313232524|emb|CBY19194.1| unnamed protein product [Oikopleura dioica]
Length = 281
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL L+ + A P+P M+E+L T LS RVI+VWFQN+R K+++ MK
Sbjct: 168 RTTIKAKQLEILKNAFLAAPKPTRHMREKLSTETGLSMRVIQVWFQNRRSKERR----MK 223
Query: 146 QQLQ----------------------QEKDGRKMGYGSMQGIPM 167
Q Q Q++ G +M Y +M G+P+
Sbjct: 224 QIKQCDLSKRMYSTEADFHYQAMMSSQDQFGAEMAYANM-GMPI 266
>gi|75993708|gb|ABA33890.1| lim homeobox transcription factor 2 [Danio rerio]
Length = 396
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 254 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 313
Query: 141 ALAMKQQ-LQQEKDGRKMGYGSMQG 164
L + + + DG + G+ G
Sbjct: 314 LLRQENTGVDKASDGSNLAGGTPSG 338
>gi|47550979|ref|NP_999663.1| goosecoid transcription factor [Strongylocentrotus purpuratus]
gi|11127990|gb|AAG31170.1|AF315231_1 goosecoid transcription factor Gsc [Strongylocentrotus purpuratus]
Length = 320
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT+ E+QL L + PD +++E+L +L + VWF+N+R K +K+
Sbjct: 147 RHRTIFTEEQLEQLEATFEKTHYPDVMLREELAIKVDLKEERVEVWFKNRRAKWRKQKRE 206
Query: 144 MKQQLQQEKDGRKMGYGS 161
++ ++ + K YGS
Sbjct: 207 QQEAAKRASEAYKTEYGS 224
>gi|195452800|ref|XP_002073505.1| GK14154 [Drosophila willistoni]
gi|194169590|gb|EDW84491.1| GK14154 [Drosophila willistoni]
Length = 1293
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
+G G+ RVRT +NE+Q L+ Y N RP + L PRV++VWFQN R
Sbjct: 746 NGEAGRKVRVRTAINEEQQQQLKQHYAHNARPSRDEFRLIAARLQLDPRVVQVWFQNNRS 805
Query: 136 KDKK 139
+++K
Sbjct: 806 RERK 809
>gi|82621617|gb|ABB86480.1| LHX6/8-LIM class homeobox protein, partial [Nematostella vectensis]
gi|110339153|gb|ABG67840.1| LHX67, partial [Nematostella vectensis]
Length = 60
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RVRT E QL L+ +N + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 3 RVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 58
>gi|60360618|dbj|BAD90323.1| mKIAA4228 protein [Mus musculus]
Length = 1123
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 337 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 396
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 397 VWFQNARAKEKKSKLSMAKHF 417
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGDG--KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 20 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 79
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 80 IAHEVGLKKRVVQVWFQNTRARERK 104
>gi|133778048|gb|AAI27382.2| LIM homeobox 2 [Danio rerio]
gi|182888988|gb|AAI64490.1| Lhx2 protein [Danio rerio]
Length = 396
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 254 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 313
Query: 141 ALAMKQQ-LQQEKDGRKMGYGSMQG 164
L + + + DG + G+ G
Sbjct: 314 LLRQENTGVDKASDGSNLAGGTPSG 338
>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
Length = 842
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
Length = 842
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|221119369|ref|XP_002160848.1| PREDICTED: homeobox protein aristaless-like isoform 2 [Hydra
magnipapillata]
Length = 210
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 73 RKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
++ S G K R RT + QL L ++ PD M+E+L +L+ ++VWFQN
Sbjct: 12 QRFSNGKRKQRRYRTTFTQFQLDELERAFDKTHYPDVFMREELAVRVHLTEARVQVWFQN 71
Query: 133 KRCKDKKRALAMKQQLQQEKDG 154
+R K +KR + + Q++ G
Sbjct: 72 RRAKWRKRE-KLSYNVHQQQHG 92
>gi|190338019|gb|AAI62549.1| LIM homeobox 2 [Danio rerio]
Length = 396
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 254 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 313
Query: 141 ALAMKQQ-LQQEKDGRKMGYGSMQG 164
L + + + DG + G+ G
Sbjct: 314 LLRQENTGVDKASDGSNLAGGTPSG 338
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 69 LGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
+GR RK+ R RT QLH L + PD +E+L +LS ++V
Sbjct: 123 MGRPRKIR-------RSRTTFTTFQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQV 175
Query: 129 WFQNKRCKDKKRALAM 144
WFQN+R K +KR AM
Sbjct: 176 WFQNRRAKWRKREKAM 191
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + KQL L++ + A P+P ++E+L + T L+ RVI+VWFQN+R K+++
Sbjct: 157 RTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQVWFQNRRSKERR 210
>gi|187171273|ref|NP_001035099.3| LIM/homeobox protein Lhx2 [Danio rerio]
Length = 427
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 285 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 344
Query: 141 ALAMKQQ-LQQEKDGRKMGYGSMQG 164
L + + + DG + G+ G
Sbjct: 345 LLRQENTGVDKASDGSNLAGGTPSG 369
>gi|312075006|ref|XP_003140224.1| hypothetical protein LOAG_04639 [Loa loa]
Length = 325
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ K L L+ Y A+ +P ++EQL T L RV++VWFQN+R K+K
Sbjct: 143 DSNTKRPRTTISAKSLEILKQAYQASSKPARHIREQLAADTGLDMRVVQVWFQNRRAKEK 202
Query: 139 KRALAMKQQLQQEKDGRKMG-YGSMQGIPMVASSP 172
+ ++ GR+ G YG + + ++SP
Sbjct: 203 R---------LKKDAGRQWGTYGITKSLDSGSASP 228
>gi|241753309|ref|XP_002401118.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215508343|gb|EEC17797.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 357
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R+RT QL T+++ + N PDA +QL + T LS RV++VWFQN R K ++ L
Sbjct: 255 RMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNNLR 314
Query: 144 MKQQ 147
++Q
Sbjct: 315 QQEQ 318
>gi|395858590|ref|XP_003801649.1| PREDICTED: divergent paired-related homeobox [Otolemur garnettii]
Length = 192
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT+ EKQL L+ Y+ NP P+ +++++ ++ P V++VWF+N+R K KK
Sbjct: 18 RRRTIFTEKQLEALKVLYDKNPYPNPSLQKEMASKIDIHPTVLQVWFKNQRAKLKK 73
>gi|410900432|ref|XP_003963700.1| PREDICTED: homeobox protein prophet of Pit-1-like [Takifugu
rubripes]
Length = 228
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT KQL L + N PD +E+L +T L+ I+VWFQN+R K +K+ A
Sbjct: 65 RHRTTFTHKQLEQLEVAFGQNQYPDIYYREELARVTKLNEARIQVWFQNRRAKQRKQERA 124
Query: 144 MKQQL 148
++ L
Sbjct: 125 SQKLL 129
>gi|170578520|ref|XP_001894442.1| homeobox domain containing protein [Brugia malayi]
gi|158598966|gb|EDP36714.1| homeobox domain containing protein [Brugia malayi]
Length = 248
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ +N N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 145 KSKRMRTSFKHHQLRTMKSYFNLNHNPDAKDLKQLAQRTGLTKRVLQVWFQNARAKFRRN 204
Query: 141 ALAMKQ 146
++ ++
Sbjct: 205 SIQCRE 210
>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
sativus]
Length = 841
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QLV ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLVRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|348529742|ref|XP_003452372.1| PREDICTED: paired box protein Pax-7-like [Oreochromis niloticus]
Length = 231
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 54 DALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVR--TVLNEKQLHTLRTCYNANPRPDALM 111
D++ K L E T++ +G R+ S P R R T + KQL L + N PD
Sbjct: 35 DSVRKGTLCE-TSVAVGFNRR-SRAYPSPARRRHRTTFSHKQLEQLEVAFGQNQYPDIYY 92
Query: 112 KEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQL 148
+E+L +T L+ I+VWFQN+R K +K+ A ++ L
Sbjct: 93 REELARITKLNEARIQVWFQNRRAKQRKQERASQKVL 129
>gi|444717046|gb|ELW57882.1| LIM/homeobox protein Lhx9 [Tupaia chinensis]
Length = 378
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 247 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 306
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG+ +
Sbjct: 307 LLRQENGGVDKADGKSL 323
>gi|332029130|gb|EGI69141.1| LIM/homeobox protein Awh [Acromyrmex echinatior]
Length = 292
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
G K RVRT E+QL L+ + + PD E++ +T LS R+ +VWFQN R +
Sbjct: 141 GGNKAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRITQVWFQNSRARQ 200
Query: 138 KK 139
KK
Sbjct: 201 KK 202
>gi|154286942|ref|XP_001544266.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407907|gb|EDN03448.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 736
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 37/151 (24%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL----- 142
+ QL TL T +N NP P A ++E++ E N++ R +++WFQN+R K K K+ +
Sbjct: 90 QDQLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIAKKGIETGED 149
Query: 143 ------AMKQQLQQEKD----------GRKMGYG--SMQGIPMVASSPVRHDSP------ 178
+M+Q L D R GYG +M P+ + V H
Sbjct: 150 CDAIPESMRQYLALHFDTSKSHARNLFNRYPGYGPNAMHEPPISSGKIVIHHFACRSLRI 209
Query: 179 -----IGMNALEVTSYQPPWKALSDFALHTD 204
+G NA+++ + P K+ + ++ D
Sbjct: 210 GTWRRVGQNAMDLVIFYSPEKSCMTYYINND 240
>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
Length = 837
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 21 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 80
Query: 148 LQQEK 152
K
Sbjct: 81 TVNRK 85
>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
Length = 844
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 23 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 82
Query: 148 LQQEK 152
K
Sbjct: 83 TVNRK 87
>gi|76667074|dbj|BAE45356.1| LIM homeodomain type transcription factor Lhx2 [Danio rerio]
Length = 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 253 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 312
Query: 141 ALAMKQQ-LQQEKDGRKMGYGSMQG 164
L + + + DG + G+ G
Sbjct: 313 LLRQENTGVDKASDGSNLAGGTPSG 337
>gi|300708652|ref|XP_002996501.1| hypothetical protein NCER_100403 [Nosema ceranae BRL01]
gi|239605808|gb|EEQ82830.1| hypothetical protein NCER_100403 [Nosema ceranae BRL01]
Length = 141
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 76 SGGDGKPT---RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
S GD P RVRTV++ Q L C+ NP P ++E+L + + PR I++WFQN
Sbjct: 31 SDGDDVPIINRRVRTVMSPYQSKILHECFCKNPFPSTELREELSRVLKMKPRTIQIWFQN 90
Query: 133 KRCKDK 138
+R K K
Sbjct: 91 QRQKSK 96
>gi|326930544|ref|XP_003211406.1| PREDICTED: LIM/homeobox protein Lhx2-like [Meleagris gallopavo]
Length = 267
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 126 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 185
Query: 141 AL 142
L
Sbjct: 186 LL 187
>gi|327290044|ref|XP_003229734.1| PREDICTED: LIM/homeobox protein Lhx2-like, partial [Anolis
carolinensis]
Length = 163
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 22 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 81
Query: 141 ALAMKQQLQQEKDG-RKMGYGSMQ-GIPMVASSPVRHDS 177
L+QE G K G++Q G P +S + + S
Sbjct: 82 L------LRQETTGVDKASEGALQAGTPSGPASEISNTS 114
>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
REVOLUTA-like [Cucumis sativus]
Length = 840
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QLV ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLVRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|393912072|gb|EFO23845.2| hypothetical protein LOAG_04639 [Loa loa]
Length = 319
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK 138
D R RT ++ K L L+ Y A+ +P ++EQL T L RV++VWFQN+R K+K
Sbjct: 137 DSNTKRPRTTISAKSLEILKQAYQASSKPARHIREQLAADTGLDMRVVQVWFQNRRAKEK 196
Query: 139 KRALAMKQQLQQEKDGRKMG-YGSMQGIPMVASSP 172
+ ++ GR+ G YG + + ++SP
Sbjct: 197 R---------LKKDAGRQWGTYGITKSLDSGSASP 222
>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
Length = 845
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKR 140
+Q+ L Y P+P +L ++QL+ ++N+ PR I+VWFQN+RC++K+R
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECSILSNIEPRQIKVWFQNRRCREKQR 84
>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 48 EQVDALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 107
Query: 148 LQQEK 152
K
Sbjct: 108 TVNRK 112
>gi|328788511|ref|XP_001120111.2| PREDICTED: short stature homeobox protein 2-like [Apis mellifera]
Length = 376
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 55 ALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+LM+E+ + +N R G+GK R RT +QL L ++ PDA M+E+
Sbjct: 166 SLMQEEGGKGSN-----CRNSGNGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREE 220
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
L + LS ++VWFQN+R K +K
Sbjct: 221 LSQRLGLSEARVQVWFQNRRAKCRK 245
>gi|327277798|ref|XP_003223650.1| PREDICTED: LIM/homeobox protein Lhx9-like, partial [Anolis
carolinensis]
Length = 279
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 148 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 207
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 208 LLRQENGGVDKADGTSL 224
>gi|312371612|gb|EFR19750.1| hypothetical protein AND_21856 [Anopheles darlingi]
Length = 234
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRC 135
SG KP R RT +Q+ L + PDA ++E+L + +LS ++VWFQN+R
Sbjct: 43 SGSSKKPRRTRTSFTSQQILALEKIFERTHYPDAFVREELAKENSLSEARVQVWFQNRRA 102
Query: 136 KDKK 139
K ++
Sbjct: 103 KFRR 106
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 4 SGSTKGGIVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE 63
+GS++ + T S + SG KP R RT +Q+ L + PDA ++E+L +
Sbjct: 25 AGSSRKMLKRETVPSKEHSGSSKKPRRTRTSFTSQQILALEKIFERTHYPDAFVREELAK 84
Query: 64 MTNLFLGRVR 73
+L RV+
Sbjct: 85 ENSLSEARVQ 94
>gi|242007294|ref|XP_002424476.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
gi|212507894|gb|EEB11738.1| Homeobox protein ceh-14, putative [Pediculus humanus corporis]
Length = 389
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + + +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 167 DGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAK 226
Query: 137 DKKRALAMKQQ----LQQEKDGRKM 157
KK KQ+ L ++KD + +
Sbjct: 227 VKKIQRKAKQEQDKGLDKDKDEKSI 251
>gi|85102414|ref|XP_961320.1| hypothetical protein NCU03593 [Neurospora crassa OR74A]
gi|28922864|gb|EAA32084.1| hypothetical protein NCU03593 [Neurospora crassa OR74A]
gi|38566786|emb|CAE76096.1| probable homeoprotein [Neurospora crassa]
Length = 615
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL----- 142
+ QL TL +N NP P A ++E++ E N++ R +++WFQN+R K K K++L
Sbjct: 86 QDQLTTLEMEFNKNPTPTATVRERIAEEINMTERSVQIWFQNRRAKIKLLAKKSLESGED 145
Query: 143 ------AMKQQL--QQEKDGRKMGYGSMQGI 165
+M+Q L Q + G+ +GY G+
Sbjct: 146 MDSIPESMRQYLAIQAMESGKGLGYFGRTGL 176
>gi|321258478|ref|XP_003193960.1| LIM-homeobox protein [Cryptococcus gattii WM276]
gi|317460430|gb|ADV22173.1| LIM-homeobox protein, putative [Cryptococcus gattii WM276]
Length = 811
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 93 QLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQEK 152
QL L Y+ NP+PD ++EQL ++ R ++VWFQN+R K K LA K+ +EK
Sbjct: 172 QLKVLEFWYDINPKPDNQLREQLAAQLGMTKRNVQVWFQNRRAKMK--GLAKKE--AEEK 227
Query: 153 DGRK 156
+ RK
Sbjct: 228 ENRK 231
>gi|312385469|gb|EFR29961.1| hypothetical protein AND_00756 [Anopheles darlingi]
Length = 344
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 195 NKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIAQLTGLSKRVTQVWFQNSRARQKK 254
>gi|403307194|ref|XP_003944091.1| PREDICTED: double homeobox protein A [Saimiri boliviensis
boliviensis]
Length = 400
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 37/166 (22%)
Query: 12 VSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGR 71
V+ +SS K+ G + + R RT E QL L +N P P K +L N R
Sbjct: 199 VAGDTSSHKMVGTNHR--RSRTKFTEDQLKILINTFNQKPYPGYATKRKLALEINTEESR 256
Query: 72 VR-------------KVSG----------GDGKPT---------RVRTVLNEKQLHTLRT 99
++ K SG G G+P R RT+ + QLHTL
Sbjct: 257 IQIWFQNRRARFGLQKRSGPETLESSQTHGQGQPVTEFQSREARRCRTIYSTSQLHTLIE 316
Query: 100 CYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK---DKKRAL 142
+ NP P +EQL + + +++WFQN+R + +KR L
Sbjct: 317 AFMKNPYPGIDYREQLAKEIGVPESRVQIWFQNRRSRFHLQRKREL 362
>gi|13447045|gb|AAA63768.2| homeobox-leucine zipper protein HAHB-4 [Helianthus annuus]
Length = 181
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
R +KQ+ L + RP+ MK QL L PR + +WFQNKR + K R
Sbjct: 21 RKRFTDKQISFLEYMFETQSRPELRMKHQLAHKLGLHPRQVAIWFQNKRARSKSR----- 75
Query: 146 QQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEV 186
Q++QE + K Y ++ S ++ ++ +N LEV
Sbjct: 76 -QIEQEYNALKHNYETLAS----KSESLKKENQALLNQLEV 111
>gi|18202592|sp|Q61329.1|ZFHX3_MOUSE RecName: Full=Zinc finger homeobox protein 3; AltName: Full=AT
motif-binding factor; AltName: Full=AT-binding
transcription factor 1; AltName: Full=Alpha-fetoprotein
enhancer-binding protein; AltName: Full=Zinc finger
homeodomain protein 3; Short=ZFH-3
gi|1345408|dbj|BAA05046.1| AT motif-binding factor [Mus musculus]
gi|1587706|prf||2207230A transcription factor ATBF1
Length = 3726
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 2940 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 2999
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 3000 VWFQNARAKEKKSKLSMAKHF 3020
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2306
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2623 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2682
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2683 IAHEVGLKKRVVQVWFQNTRARERK 2707
>gi|345488261|ref|XP_001602803.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like,
partial [Nasonia vitripennis]
Length = 185
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 76 SGGDG------KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
SGG G + R RT+ E+QL L ++ PD L++EQL +L I VW
Sbjct: 51 SGGPGVGPMAKRKRRHRTIFTEEQLEQLEATFDKTHYPDVLLREQLALQVDLKEERIEVW 110
Query: 130 FQNKRCKDKKRALAMKQQLQ--QEKDGRKMGYGSMQGIPMVASSPVR 174
F+N+R K +K+ +++L+ Q + + G G+ + + + SP+R
Sbjct: 111 FKNRRAKWRKQKREEQERLRKLQIEQRSRGGSGANEAVSV---SPLR 154
>gi|66472854|ref|NP_001018643.1| homeobox protein prophet of Pit-1 [Canis lupus familiaris]
gi|62900739|sp|Q9TTD8.1|PROP1_CANFA RecName: Full=Homeobox protein prophet of Pit-1; Short=PROP-1;
AltName: Full=Pituitary-specific homeodomain factor
gi|6681720|gb|AAF23266.1|AF126157_1 homeodomain protein [Canis lupus familiaris]
Length = 226
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT N QL L T + N PD +E L T LS I+VWFQN+R K +K+ +
Sbjct: 71 RHRTTFNPGQLEQLETAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNRRAKQRKQERS 130
Query: 144 MKQQL 148
+ Q L
Sbjct: 131 LLQPL 135
>gi|148679469|gb|EDL11416.1| AT motif binding factor 1 [Mus musculus]
Length = 3726
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 2940 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 2999
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 3000 VWFQNARAKEKKSKLSMAKHF 3020
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2306
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2623 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2682
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2683 IAHEVGLKKRVVQVWFQNTRARERK 2707
>gi|110225364|ref|NP_031522.2| zinc finger homeobox protein 3 [Mus musculus]
Length = 3723
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 2940 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 2999
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 3000 VWFQNARAKEKKSKLSMAKHF 3020
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2306
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2623 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2682
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2683 IAHEVGLKKRVVQVWFQNTRARERK 2707
>gi|345492348|ref|XP_001601137.2| PREDICTED: LIM/homeobox protein Awh-like [Nasonia vitripennis]
Length = 300
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 231 KTKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKKH 290
Query: 141 ALAMKQQ 147
+ +K Q
Sbjct: 291 SGKIKAQ 297
>gi|270004863|gb|EFA01311.1| arrowhead [Tribolium castaneum]
Length = 349
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 208 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 266
>gi|168988153|gb|ACA35260.1| special homeobox protein 7 [Bombyx mori]
Length = 748
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 72 VRKVS-GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWF 130
V KV+ GG KP RVRT KQ+ L Y D + +L ++ L+ R I++WF
Sbjct: 128 VNKVNNGGAKKPKRVRTAFTSKQMTELEQEYTLTKYLDRARRLELADILQLNERTIKIWF 187
Query: 131 QNKRCKDKK 139
QN+R K+KK
Sbjct: 188 QNRRMKEKK 196
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 72 VRKVS-GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWF 130
V KV+ GG KP RVRT Q+ L Y D +L + L+ R I++WF
Sbjct: 672 VTKVNNGGAKKPKRVRTAFTNNQMAELEQEYTRTKYLDRARCLELANILRLNERTIKIWF 731
Query: 131 QNKRCKDKKRALAMKQ 146
QN+ CK K A+++
Sbjct: 732 QNRECKRKNFNGALRR 747
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 76 SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ-NKR 134
+GG K RVRT Q+ L Y D + +L E+ L+ R+I++WFQ NKR
Sbjct: 475 NGGAKKTKRVRTAFTSNQMAKLEQEYTRTKYLDRARRLELAEILQLNKRIIKIWFQKNKR 534
Query: 135 CK 136
K
Sbjct: 535 EK 536
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E T LS RV
Sbjct: 203 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETRAAETGLSVRV 262
Query: 126 IRVWFQNKRCK--DKKRALAMKQQLQQEKDGRKMG 158
++VWFQN+R K D + L ++ Q+++ R G
Sbjct: 263 VQVWFQNQRAKVSDSRAGLGLRGQVEEVLSSRMEG 297
>gi|308506004|ref|XP_003115185.1| CRE-CEH-45 protein [Caenorhabditis remanei]
gi|308259367|gb|EFP03320.1| CRE-CEH-45 protein [Caenorhabditis remanei]
Length = 236
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT+ +E+QLH L T +++ PDA +E+L +L + VWF+N+R K++K+
Sbjct: 115 RHRTIFSEEQLHILETTFSSTHYPDASTREELAVQCSLKEERVEVWFKNRRAKERKQ 171
>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
thaliana, containing START PF|01852, bZIP transcription
factor PF|00170, and homeobox PF|00046 domains. ESTs
gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
this gene [Arabidopsis thaliana]
Length = 840
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 27 EQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQ 86
Query: 148 LQQEK 152
K
Sbjct: 87 TVNRK 91
>gi|24656997|ref|NP_523907.2| arrowhead, isoform A [Drosophila melanogaster]
gi|23092945|gb|AAF47800.2| arrowhead, isoform A [Drosophila melanogaster]
Length = 214
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMK 145
R + KK A K
Sbjct: 200 RARQKKHIHAGK 211
>gi|225703090|ref|NP_001139537.1| special homeobox protein 1 [Bombyx mori]
gi|168988155|gb|ACA35261.1| special homeobox protein 1 [Bombyx mori]
Length = 294
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 72 VRKVS-GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWF 130
V KV+ GG KP RVRT Q+ L Y D + +L E+ L+ R I++WF
Sbjct: 100 VNKVNNGGAKKPKRVRTAFTSNQMTELEQEYTRTKYLDRARRLELAEILQLNERTIKIWF 159
Query: 131 QNKRCKDKK 139
QN+R K+KK
Sbjct: 160 QNRRMKEKK 168
>gi|344235434|gb|EGV91537.1| LIM homeobox transcription factor 1-beta [Cricetulus griseus]
Length = 233
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 74 KVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
K SG DGK P R RT+L +Q + + + +P ++E L T LS RV++VW
Sbjct: 89 KGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVW 148
Query: 130 FQNKRCKDKKRA 141
FQN+R K KK A
Sbjct: 149 FQNQRAKMKKLA 160
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ R+RT QL T+++ +N N PDA +QL + T LS RV++VWFQN R K ++
Sbjct: 253 RTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 312
Query: 141 AL 142
+
Sbjct: 313 IM 314
>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
transcription factor ATHB-9; AltName: Full=Protein
PHAVOLUTA
gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
Length = 841
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 28 EQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQ 87
Query: 148 LQQEK 152
K
Sbjct: 88 TVNRK 92
>gi|109125989|ref|XP_001115965.1| PREDICTED: divergent paired-related homeobox-like [Macaca mulatta]
Length = 203
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
G+ R+ + R RT+ +KQL L T +N NP P+ +++++ ++ P V++VW
Sbjct: 15 GKRREARKDQTRSHRKRTMFTKKQLEDLNTLFNENPYPNPSLQKEMASKIDIHPTVLQVW 74
Query: 130 FQNKRCKDKKRALAMKQQLQQEKD 153
F+N R K KK A + + Q+++
Sbjct: 75 FKNHRAKLKK---AKSKHIHQKQE 95
>gi|347963348|ref|XP_310944.5| AGAP000190-PA [Anopheles gambiae str. PEST]
gi|333467242|gb|EAA06466.6| AGAP000190-PA [Anopheles gambiae str. PEST]
Length = 493
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT +QLH L ++ N PD +E++ TNL+ +RVWF+N+R K +KR
Sbjct: 250 RQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKR 306
>gi|432901840|ref|XP_004076973.1| PREDICTED: visual system homeobox 1-like [Oryzias latipes]
Length = 229
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + KQL L + N PD +E+L +T L+ I+VWFQN+R K +K+ A
Sbjct: 65 RHRTTFSHKQLEQLERAFGQNQYPDIYCREELARITKLNEARIQVWFQNRRAKQRKQERA 124
Query: 144 MKQQLQ 149
++ L+
Sbjct: 125 SRKVLR 130
>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
lyrata]
gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
lyrata]
Length = 840
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 27 EQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQ 86
Query: 148 LQQEK 152
K
Sbjct: 87 TVNRK 91
>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
[Glycine max]
Length = 845
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|348533440|ref|XP_003454213.1| PREDICTED: LIM/homeobox protein Lhx6-like [Oreochromis niloticus]
Length = 392
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT +QL ++T + + PDA ++L EMT LS RVI+VWFQN R + KK+
Sbjct: 265 RARTSFTAEQLQVMQTQFAQDNNPDAQTLQKLAEMTGLSRRVIQVWFQNCRARHKKQ 321
>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
Length = 844
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 30 EQVEALERLYHECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 89
Query: 148 LQQEK 152
K
Sbjct: 90 AVNRK 94
>gi|383857877|ref|XP_003704430.1| PREDICTED: LIM/homeobox protein Awh-like [Megachile rotundata]
Length = 371
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 223 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK 281
>gi|330858350|gb|AEC46867.1| LIM homeobox 1 protein [Coturnix japonica]
Length = 151
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+
Sbjct: 104 RTTIKAKQLETLKAAFAATPKPARHIREQLAQETGLNMRVIQVWFQNR 151
>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
Length = 844
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 31 EQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCREKQRKESARLQ 90
Query: 148 LQQEK 152
K
Sbjct: 91 TVNRK 95
>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
Length = 835
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKR 134
+GK R T +Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+R
Sbjct: 14 NGKYVRYTT----EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 69
Query: 135 CKDKKRALAMKQQLQQEK 152
C++K+R + + Q +K
Sbjct: 70 CREKQRKESSRLQTVNKK 87
>gi|3046880|gb|AAC13544.1| LIM-homeodomain protein LMX1B/LMX1.2 [Homo sapiens]
Length = 161
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 74 KVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
K SG DGK P R RT+L +Q + + + +P ++E L T LS RV++VW
Sbjct: 90 KGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVW 149
Query: 130 FQNKRCKDKKRA 141
FQN+R K KK A
Sbjct: 150 FQNQRAKMKKLA 161
>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
max]
Length = 842
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|357605400|gb|EHJ64588.1| hypothetical protein KGM_21596 [Danaus plexippus]
Length = 406
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 280 KAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQVTGLSKRVTQVWFQNSRARQKK 338
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 269 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 328
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 329 VLRQENGGVDKADGTSL 345
>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
Length = 518
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 22 EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQNRRCREKQRKESFRLQ 81
>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
Length = 849
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKR 134
+GK R T +Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+R
Sbjct: 27 NGKYVRYTT----EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
Query: 135 CKDKKRALAMKQQLQQEK 152
C++K+R + + Q +K
Sbjct: 83 CREKQRKESSRLQTVNKK 100
>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
Length = 848
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 79 DGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKR 134
+GK R T +Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+R
Sbjct: 26 NGKYVRYTT----EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 81
Query: 135 CKDKKRALAMKQQLQQEK 152
C++K+R + + Q +K
Sbjct: 82 CREKQRKESSRLQTVNKK 99
>gi|452845567|gb|EME47500.1| hypothetical protein DOTSEDRAFT_69441 [Dothistroma septosporum
NZE10]
Length = 718
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQ 150
+ QL TL +N NP P AL++E++ N++ R +++WFQN+R K K A K+ ++
Sbjct: 67 QDQLMTLEVEFNKNPTPTALVRERIASEINMTERSVQIWFQNRRAKIKNIA---KRSIES 123
Query: 151 EKDGRKMGYGSMQGIPMVASSP 172
+D + Q + M A +P
Sbjct: 124 GEDCDSIPESMRQYLAMQAYAP 145
>gi|170032117|ref|XP_001843929.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871878|gb|EDS35261.1| lim homeobox protein [Culex quinquefasciatus]
Length = 453
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + + +P+P ++E L + T LS R+++VWFQN+R K
Sbjct: 146 DGRRGPKRPRTILTTQQRRAFKASFEVSPKPCRKIREGLAKDTGLSIRIVQVWFQNQRAK 205
Query: 137 DKKRALAMKQQLQQEKDGRKMGYGSMQG 164
KK K+QL++ G S +G
Sbjct: 206 MKK---IQKKQLKEGNKGNHNSNSSSKG 230
>gi|149058475|gb|EDM09632.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
gi|149058478|gb|EDM09635.1| LIM homeobox 9, isoform CRA_a [Rattus norvegicus]
Length = 349
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 218 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 277
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 278 LLRQENGGVDKADGTSL 294
>gi|149411850|ref|XP_001509863.1| PREDICTED: zinc finger homeobox protein 3 [Ornithorhynchus anatinus]
Length = 3710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 2949 GSAGKSGDGGERPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 3008
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 3009 VWFQNARAKEKKSKLSMAKHF 3029
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2252 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2305
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2631 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2690
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2691 IAHEVGLKKRVVQVWFQNTRARERK 2715
>gi|432852001|ref|XP_004067146.1| PREDICTED: zinc finger homeobox protein 3-like [Oryzias latipes]
Length = 3769
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 72 VRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVW 129
R + GD +P R RT + QL L++C+N P L E L L RV++VW
Sbjct: 2979 TRSIDSGD-RPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNEIGLPKRVVQVW 3037
Query: 130 FQNKRCKDKKRALAMKQQL 148
FQN R K+KK L M +
Sbjct: 3038 FQNARAKEKKAKLNMAKHF 3056
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + QL L+ ++AN P EQL + +L RVI VWFQN R K +K
Sbjct: 2301 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLSLPTRVIVVWFQNARQKARKN----- 2355
Query: 146 QQLQQEKDGRKMG 158
+ + DG K G
Sbjct: 2356 --YENQGDGGKEG 2366
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M + + L RV++VWFQN R +++K
Sbjct: 2693 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2748
>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
Length = 832
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ PR I+VWFQN+RC++K+R + + Q
Sbjct: 22 EQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPRQIKVWFQNRRCREKQRKESFRLQ 81
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R K R ++
Sbjct: 392 RMRTSFKHHQLRTMKSYFALNHNPDAKDLKQLSQKTGLPKRVLQVWFQNARA--KWRRMS 449
Query: 144 MKQQLQQEK-----DGRKMG----YGSMQG 164
+KQ+ + +K DG +G YG+ G
Sbjct: 450 LKQEGKMDKCDGGVDGGNLGDLELYGNCAG 479
>gi|145258409|ref|XP_001402033.1| homeobox transcription factor (RfeB) [Aspergillus niger CBS 513.88]
gi|134074639|emb|CAK44672.1| unnamed protein product [Aspergillus niger]
Length = 604
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 40/158 (25%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL 142
R + QL TL +N NP P A +E++ + N++ R +++WFQN+R K K K+++
Sbjct: 66 RQRATQDQLVTLELEFNKNPTPTAATRERIAQEINMTERSVQIWFQNRRAKIKMLAKKSI 125
Query: 143 -----------AMKQQLQQEKD----------GRKMGYGSMQGIPMVASSP-----VRHD 176
+M+Q L + D GR GYG+ P S+P + H
Sbjct: 126 ETGEGCDSIPESMRQYLAMQFDPTKPGARDPFGRTGGYGTGSVYPH-ESAPSGKVVIHHF 184
Query: 177 SP----------IGMNALEVTSYQPPWKALSDFALHTD 204
+ IG NA+++ + P KA + ++ D
Sbjct: 185 TCRSLTIGSWRRIGQNAMDLVVFYSPEKACMTYYINND 222
>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
[Glycine max]
Length = 844
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 32 EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 91
Query: 148 LQQEK 152
K
Sbjct: 92 TVNRK 96
>gi|432854590|ref|XP_004067976.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Oryzias latipes]
Length = 378
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 248 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 307
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 308 VLRQENGGVDKADGTSL 324
>gi|2435404|gb|AAB71337.1| arrowhead [Drosophila melanogaster]
Length = 214
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTEVWFQNS 199
Query: 134 RCKDKKRALAMKQQ 147
R + KK A K +
Sbjct: 200 RARQKKHIHAGKNK 213
>gi|443703132|gb|ELU00843.1| hypothetical protein CAPTEDRAFT_221751 [Capitella teleta]
Length = 241
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 72 VRKVSGGDG---------KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLS 122
V + GG G K RVRT E+QL L+ + + PD E++ ++T LS
Sbjct: 104 VEAIEGGPGSDENSNQKQKTKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLS 163
Query: 123 PRVIRVWFQNKRCKDKK 139
RV +VWFQN R + KK
Sbjct: 164 KRVTQVWFQNSRARQKK 180
>gi|405973461|gb|EKC38176.1| LIM/homeobox protein Awh [Crassostrea gigas]
Length = 278
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K RVRT E QL L+ + + PD E++ ++T LS RV +VWFQN R + KK+
Sbjct: 179 KAKRVRTTFTEDQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKKQ 238
>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
max]
Length = 846
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|328781496|ref|XP_001121365.2| PREDICTED: LIM/homeobox protein Awh-like [Apis mellifera]
Length = 332
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 183 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK 241
>gi|350399127|ref|XP_003485430.1| PREDICTED: short stature homeobox protein 2-like [Bombus impatiens]
Length = 384
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 72 VRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQ 131
R G+GK R RT +QL L ++ PDA M+E+L + LS ++VWFQ
Sbjct: 180 CRNSGNGNGKQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 239
Query: 132 NKRCKDKK 139
N+R K +K
Sbjct: 240 NRRAKCRK 247
>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
Length = 849
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 30 EQVEALERVYSECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 89
Query: 148 LQQEK 152
K
Sbjct: 90 TVNRK 94
>gi|380013153|ref|XP_003690632.1| PREDICTED: LIM/homeobox protein Awh-like [Apis florea]
Length = 332
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 183 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK 241
>gi|340721611|ref|XP_003399211.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus terrestris]
gi|350404711|ref|XP_003487194.1| PREDICTED: LIM/homeobox protein Awh-like [Bombus impatiens]
Length = 334
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN R + KK
Sbjct: 185 KAKRVRTTFTEEQLSVLQANFQLDSNPDGQDLERIAHVTGLSKRVTQVWFQNSRARQKK 243
>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
Length = 782
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 74 KVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVW 129
K++ +GK R +Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+VW
Sbjct: 15 KIAMDNGKYVR----YTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVW 70
Query: 130 FQNKRCKDKKRALAMKQQLQQEK 152
FQN+RC++K+R A + Q K
Sbjct: 71 FQNRRCREKQRKEASRLQAVNRK 93
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 278 KSKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 337
Query: 141 ALAMKQQLQQEKDG 154
L+QE +G
Sbjct: 338 L------LRQENNG 345
>gi|4838455|gb|AAD30998.1|AF126249_1 homeobox protein manacle [Hydra vulgaris]
Length = 222
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 53 PDALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMK 112
PD + ++L E + GR K RVRT QL TL + + PD +++
Sbjct: 67 PDGRLLDKLNEKQDHLYGR---------KHRRVRTAFTHHQLTTLERTFETSHYPDVVLR 117
Query: 113 EQLVEMTNLSPRVIRVWFQNKRCKDKKRAL 142
E+L T L+ I+VWF+N+R K +K L
Sbjct: 118 ERLASFTGLAESRIQVWFKNRRAKYRKHQL 147
>gi|325094699|gb|EGC48009.1| homeobox domain-containing protein [Ajellomyces capsulatus H88]
Length = 736
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 37/151 (24%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL----- 142
+ QL TL T +N NP P A ++E++ E N++ R +++WFQN+R K K K+ +
Sbjct: 90 QDQLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIAKKGIETGED 149
Query: 143 ------AMKQQLQQEKDGRKM----------GYG--SMQGIPMVASSPVRHDSP------ 178
+M+Q L D K GYG M P+ + V H
Sbjct: 150 CDAIPESMRQYLALHFDTSKAHARNLFNRYPGYGPNEMHEPPVSSGKIVIHHFACRSLRI 209
Query: 179 -----IGMNALEVTSYQPPWKALSDFALHTD 204
+G NA+++ + P K+ + ++ D
Sbjct: 210 GTWRRVGQNAMDLVIFYSPEKSCMTYYINND 240
>gi|225555387|gb|EEH03679.1| homeobox domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 736
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 37/151 (24%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL----- 142
+ QL TL T +N NP P A ++E++ E N++ R +++WFQN+R K K K+ +
Sbjct: 90 QDQLVTLETEFNKNPTPTAAVRERIAEEINMTERSVQIWFQNRRAKIKMIAKKGIETGED 149
Query: 143 ------AMKQQLQQEKDGRKM----------GYG--SMQGIPMVASSPVRHDSP------ 178
+M+Q L D K GYG M P+ + V H
Sbjct: 150 CDAIPESMRQYLALHFDTSKAHARNLFNRYPGYGPNEMHEPPVSSGKIVIHHFACRSLRI 209
Query: 179 -----IGMNALEVTSYQPPWKALSDFALHTD 204
+G NA+++ + P K+ + ++ D
Sbjct: 210 GTWRRVGQNAMDLVIFYSPEKSCMTYYINND 240
>gi|157119550|ref|XP_001659419.1| lim homeobox protein [Aedes aegypti]
gi|108875287|gb|EAT39512.1| AAEL008694-PA [Aedes aegypti]
Length = 245
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 67 LFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
L LG R + G + R+RT QL T+++ + N PDA +QL + T L RV+
Sbjct: 130 LDLGFSRGL-GSSSRAKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVL 188
Query: 127 RVWFQNKRCKDKKRALAMKQQ 147
+VWFQN R K R + MKQ+
Sbjct: 189 QVWFQNARA--KWRRMMMKQE 207
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 278 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 337
Query: 141 ALAMKQQLQQEKDG 154
L+QE +G
Sbjct: 338 L------LRQENNG 345
>gi|291414337|ref|XP_002723417.1| PREDICTED: paired related homeobox 2, partial [Oryctolagus
cuniculus]
Length = 223
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT N QL L + PDA ++E+L NLS ++VWFQN+R K ++
Sbjct: 73 KQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRN 132
Query: 141 ALAM 144
AM
Sbjct: 133 ERAM 136
>gi|197281998|gb|ACH57178.1| Lim3/4 [Trichoplax adhaerens]
Length = 60
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + ++QL L + Y PRP + +E + L RV++VWFQNKR KDK+
Sbjct: 5 RTSITQQQLKMLNSVYRIKPRPSRITREMIATKVGLDLRVVQVWFQNKRAKDKR 58
>gi|432854592|ref|XP_004067977.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Oryzias latipes]
Length = 380
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 250 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 309
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 310 VLRQENGGVDKADGTSL 326
>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
Length = 849
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 30 EQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 89
Query: 148 LQQEK 152
K
Sbjct: 90 TVNRK 94
>gi|38511959|gb|AAH60729.1| Zfhx3 protein [Mus musculus]
Length = 1707
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 70 GRVRKVSGGDGKP--TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
G K G +P R RT + QL L++C+N P L E L L RV++
Sbjct: 924 GSAGKSGDGGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQ 983
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN R K+KK L+M +
Sbjct: 984 VWFQNARAKEKKSKLSMAKHF 1004
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 237 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 290
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 607 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 666
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 667 IAHEVGLKKRVVQVWFQNTRARERK 691
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R K R +
Sbjct: 444 RMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARA--KWRRMV 501
Query: 144 MKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPI 179
+KQ+ + +K + G++ + + +S R P+
Sbjct: 502 LKQEGKSDKCDGGVDGGNLGDLELYGNSTGRGGPPV 537
>gi|158292633|ref|XP_558527.3| AGAP005137-PA [Anopheles gambiae str. PEST]
gi|157017083|gb|EAL40471.3| AGAP005137-PA [Anopheles gambiae str. PEST]
Length = 432
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 219 DGRRGPKRPRTILTSAQRRQFKASFDVSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 278
Query: 137 DKKRALAMKQQLQQEKDGRK 156
KK K DG K
Sbjct: 279 MKKILRKSKANANGATDGEK 298
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 70 GRVRKVSGGDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPR 124
GRV + G D +P R RT+L +Q + + + +P ++E L T LS R
Sbjct: 201 GRVNQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVR 260
Query: 125 VIRVWFQNKRCKDKKRA 141
V++VWFQN+R K KK A
Sbjct: 261 VVQVWFQNQRAKIKKLA 277
>gi|403307414|ref|XP_003944190.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 388
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 257 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 316
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 317 LLRQENGGADKADGTSL 333
>gi|393905837|gb|EJD74086.1| hypothetical protein LOAG_18551 [Loa loa]
Length = 222
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 64 MTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSP 123
+ N F+ G + R RT+ +E+QL L + PD +++E+L +L
Sbjct: 80 INNGFITSFHPFHYGGKRKRRHRTIFSEEQLQILENAFQGTHYPDVMLREKLAVQCDLKE 139
Query: 124 RVIRVWFQNKRCKDKKR 140
+ VWF+N+R KD+K+
Sbjct: 140 ERVEVWFKNRRAKDRKQ 156
>gi|358335415|dbj|GAA53940.1| LIM homeobox protein 2/9 [Clonorchis sinensis]
Length = 506
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT Q+HT++ ++ N PD+ ++L T LS RV++VWFQN R K ++
Sbjct: 280 KSKRIRTSFKHDQIHTMKLFFDKNQNPDSKDLKELSIATGLSKRVLQVWFQNARAKYRRS 339
Query: 141 ALA------MKQQLQQEKDGRKMGYGSMQGIPMV----ASSPVRHDSPIGMNALEVTSYQ 190
L+ Q L + S+ I + A+SP ++P + V Q
Sbjct: 340 MLSPTYPGQTGQGLSIHSSQDQQFAQSLSSISDIFSRKAASPPLTETPKSLQLSPVE--Q 397
Query: 191 PPWKALSDF-ALHTD 204
PPW A+H+D
Sbjct: 398 PPWMFNETIRAMHSD 412
>gi|157117543|ref|XP_001658818.1| homeobox protein [Aedes aegypti]
gi|108876010|gb|EAT40235.1| AAEL008022-PA [Aedes aegypti]
Length = 482
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
R RT +QLH L ++ N PD +E++ TNL+ +RVWF+N+R K +KR
Sbjct: 240 RQRTHFTSQQLHELEQTFSRNRYPDMSTREEIAMWTNLTEARVRVWFKNRRAKWRKR 296
>gi|170048226|ref|XP_001870662.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870356|gb|EDS33739.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 263
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
G + R+RT QL T+++ + N PDA +QL + T L RV++VWFQN R
Sbjct: 156 GSSSRAKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQVWFQNARA- 214
Query: 137 DKKRALAMKQQ 147
K R + MKQ+
Sbjct: 215 -KWRRMMMKQE 224
>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
Length = 857
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R + + Q
Sbjct: 35 EQVEALERVYSECPKPSSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQRKESSRLQ 94
Query: 148 LQQEK 152
K
Sbjct: 95 TVNRK 99
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 73 RKVSGGDG-----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
+ SG DG K R+RT QL L + PD +E++ +L+ ++
Sbjct: 124 KAYSGHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 183
Query: 128 VWFQNKRCKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPV 173
VWFQN+R K +K +++L Q+K + G G G ASSPV
Sbjct: 184 VWFQNRRAKFRK-----QERLAQQKSSSQSGIGVDSG----ASSPV 220
>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
max]
Length = 846
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 TVNRK 89
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 72 VRKVSGGD---GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
+ K GG+ GK R RT QL L + PD +EQL T+L+ ++V
Sbjct: 166 LEKADGGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQV 225
Query: 129 WFQNKRCKDKKR 140
WFQN+R K +KR
Sbjct: 226 WFQNRRAKWRKR 237
>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
Length = 842
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
G + K GK R +Q+ L Y+ P+P +L ++QL+ ++N+ P+
Sbjct: 14 GSINKHLTDSGKYVR----YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 69
Query: 126 IRVWFQNKRCKDKKR 140
I+VWFQN+RC++K+R
Sbjct: 70 IKVWFQNRRCREKQR 84
>gi|91077954|ref|XP_967240.1| PREDICTED: similar to CG32105 CG32105-PB [Tribolium castaneum]
Length = 472
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + + +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 267 DGRRGPKRPRTILTSAQRRQFKASFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAK 326
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 327 MKKIQRKAKQ 336
>gi|449473037|ref|XP_004176289.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
[Taeniopygia guttata]
Length = 3402
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2862 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2921
Query: 144 MKQQL 148
M +
Sbjct: 2922 MAKHF 2926
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2161 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2214
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGDG--KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2528 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2587
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2588 IAHEVGLKKRVVQVWFQNTRARERK 2612
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 376 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 435
Query: 141 ALAMKQQLQQEKDG 154
L + + DG
Sbjct: 436 ILRQENGGVDKADG 449
>gi|441597660|ref|XP_004087398.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Nomascus leucogenys]
Length = 3433
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 75 VSGGDGKP---------TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
VSG GK R RT + QL L++C+N P L E L L RV
Sbjct: 2715 VSGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRV 2774
Query: 126 IRVWFQNKRCKDKKRALAMKQQL 148
++VWFQN R K+KK L+M +
Sbjct: 2775 VQVWFQNARAKEKKSKLSMAKHF 2797
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2031 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2084
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2399 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2458
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2459 IAHEVGLKKRVVQVWFQNTRARERK 2483
>gi|62665251|ref|XP_226464.3| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Rattus
norvegicus]
Length = 3730
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2959 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3018
Query: 144 MKQQL 148
M +
Sbjct: 3019 MAKHF 3023
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2257 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2310
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M + + L RV++VWFQN R +++K
Sbjct: 2655 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2710
>gi|358416638|ref|XP_003583442.1| PREDICTED: zinc finger homeobox protein 3-like [Bos taurus]
gi|359075343|ref|XP_003587277.1| PREDICTED: zinc finger homeobox protein 3-like [Bos taurus]
Length = 3695
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 75 VSGGDGKP---------TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
VSG GK R RT + QL L++C+N P L E L L RV
Sbjct: 2931 VSGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRV 2990
Query: 126 IRVWFQNKRCKDKKRALAMKQQL 148
++VWFQN R K+KK L+M +
Sbjct: 2991 VQVWFQNARAKEKKSKLSMAKHF 3013
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2300
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2615 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2674
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2675 IAHEVGLKKRVVQVWFQNTRARERK 2699
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + + +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 193 DGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAK 252
Query: 137 DKK 139
KK
Sbjct: 253 MKK 255
>gi|355699334|gb|AES01093.1| LIM homeobox 2 [Mustela putorius furo]
Length = 203
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 58 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 117
Query: 141 AL 142
L
Sbjct: 118 LL 119
>gi|312379325|gb|EFR25636.1| hypothetical protein AND_08859 [Anopheles darlingi]
Length = 317
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 53 PDALMKEQLVEMTNLFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMK 112
P L QLV+ ++ R RK +G+P R RT + +Q L ++ N +
Sbjct: 210 PAGLSAFQLVDRKGNYMARRRK---KEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRR 266
Query: 113 EQLVEMTNLSPRVIRVWFQNKRCKDKK 139
+L E+ LS I++WFQN+R KDK+
Sbjct: 267 FELAEVLKLSETQIKIWFQNRRAKDKR 293
>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
Length = 771
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 30 EQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 89
Query: 148 LQQEK 152
K
Sbjct: 90 TVNRK 94
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 69 LGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRV 128
+GR RK+ R RT QLH L + PD +E+L +LS ++V
Sbjct: 110 MGRPRKIR-------RSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARVQV 162
Query: 129 WFQNKRCKDKKRALAM 144
WFQN+R K +KR AM
Sbjct: 163 WFQNRRAKWRKREKAM 178
>gi|24663250|ref|NP_729801.1| CG32105, isoform B [Drosophila melanogaster]
gi|23093601|gb|AAF49930.2| CG32105, isoform B [Drosophila melanogaster]
gi|28316896|gb|AAO39470.1| RE70810p [Drosophila melanogaster]
Length = 640
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 419 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 478
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 479 MKKIQRKAKQ 488
>gi|293343347|ref|XP_001076847.2| PREDICTED: zinc finger homeobox protein 3 [Rattus norvegicus]
Length = 3720
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2949 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3008
Query: 144 MKQQL 148
M +
Sbjct: 3009 MAKHF 3013
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2300
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M + + L RV++VWFQN R +++K
Sbjct: 2645 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2700
>gi|168988151|gb|ACA35259.1| special homeobox protein 8 [Bombyx mori]
Length = 414
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 77 GGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
GG KP RVRT Q+ L Y D + +L E+ +L+ R I++WFQN+R K
Sbjct: 226 GGTKKPKRVRTAFTSNQMTELEQEYTRTKYLDRARRLELAEILHLNERTIKIWFQNRRMK 285
Query: 137 DKK 139
+KK
Sbjct: 286 EKK 288
>gi|426382857|ref|XP_004058017.1| PREDICTED: zinc finger homeobox protein 3 [Gorilla gorilla gorilla]
Length = 3637
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2962 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3021
Query: 144 MKQQL 148
M +
Sbjct: 3022 MAKHF 3026
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2260 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2313
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGDG--KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2628 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2687
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2688 IAHEVGLKKRVVQVWFQNTRARERK 2712
>gi|395508596|ref|XP_003758596.1| PREDICTED: zinc finger homeobox protein 3 [Sarcophilus harrisii]
Length = 3305
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2933 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2992
Query: 144 MKQQL 148
M +
Sbjct: 2993 MAKHF 2997
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2236 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2289
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2599 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2658
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2659 IAHEVGLKKRVVQVWFQNTRARERK 2683
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
K RVRT E+QL L+ + + PD E++ ++T LS RV +VWFQN R + KK
Sbjct: 200 NKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLERIAQITGLSKRVTQVWFQNSRARQKK 259
>gi|149699291|ref|XP_001500191.1| PREDICTED: zinc finger homeobox protein 3 isoform 1 [Equus caballus]
Length = 3702
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2949 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3008
Query: 144 MKQQL 148
M +
Sbjct: 3009 MAKHF 3013
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2248 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2301
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M + + L RV++VWFQN R +++K
Sbjct: 2644 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2699
>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
Length = 840
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++QL+ ++++ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|442631924|ref|NP_001261754.1| CG32105, isoform C [Drosophila melanogaster]
gi|440215685|gb|AGB94447.1| CG32105, isoform C [Drosophila melanogaster]
Length = 639
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 418 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 477
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 478 MKKIQRKAKQ 487
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 268 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 327
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 328 LLRQENGGADKADGTSL 344
>gi|363738419|ref|XP_414230.3| PREDICTED: zinc finger homeobox protein 3 [Gallus gallus]
Length = 3669
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2950 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3009
Query: 144 MKQQL 148
M +
Sbjct: 3010 MAKHF 3014
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2248 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2301
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2616 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2675
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2676 IAHEVGLKKRVVQVWFQNTRARERK 2700
>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
Length = 836
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++QL+ ++++ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
[Vitis vinifera]
gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|426243639|ref|XP_004015658.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3,
partial [Ovis aries]
Length = 3623
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 75 VSGGDGKP---------TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
VSG GK R RT + QL L++C+N P L E L L RV
Sbjct: 2926 VSGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRV 2985
Query: 126 IRVWFQNKRCKDKKRALAMKQQL 148
++VWFQN R K+KK L+M +
Sbjct: 2986 VQVWFQNARAKEKKSKLSMAKHF 3008
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2242 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2295
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2610 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2669
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2670 IAHEVGLKKRVVQVWFQNTRARERK 2694
>gi|452986963|gb|EME86719.1| hypothetical protein MYCFIDRAFT_108409, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 568
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMKQQLQQ 150
+ QL TL +N NP P AL++E++ N++ R +++WFQN+R K K A K+ ++
Sbjct: 50 QDQLMTLEVEFNKNPTPTALVRERIASEINMTERSVQIWFQNRRAKIKNIA---KRSIES 106
Query: 151 EKDGRKMGYGSMQGIPMVASSP 172
+D + Q + M A P
Sbjct: 107 GEDCDSIPESMRQYLAMQAYGP 128
>gi|440905393|gb|ELR55770.1| Zinc finger homeobox protein 3, partial [Bos grunniens mutus]
Length = 3501
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 75 VSGGDGKP---------TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
VSG GK R RT + QL L++C+N P L E L L RV
Sbjct: 2752 VSGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRV 2811
Query: 126 IRVWFQNKRCKDKKRALAMKQQL 148
++VWFQN R K+KK L+M +
Sbjct: 2812 VQVWFQNARAKEKKSKLSMAKHF 2834
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2068 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2121
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2436 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2495
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2496 IAHEVGLKKRVVQVWFQNTRARERK 2520
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 265 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 324
Query: 141 ALAMKQQLQQEKDG 154
L + + DG
Sbjct: 325 VLRQENGGVDKADG 338
>gi|397518803|ref|XP_003829566.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Pan paniscus]
Length = 3652
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2949 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3008
Query: 144 MKQQL 148
M +
Sbjct: 3009 MAKHF 3013
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2247 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2300
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2615 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2674
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2675 IAHEVGLKKRVVQVWFQNTRARERK 2699
>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
Length = 839
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 8/70 (11%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y P+P +L ++QL+ + N+ P+ I+VWFQN+RC++K+R K+
Sbjct: 30 EQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEPKQIKVWFQNRRCREKQR----KEA 85
Query: 148 LQQEKDGRKM 157
Q + RK+
Sbjct: 86 SQLQSVNRKL 95
>gi|354494575|ref|XP_003509412.1| PREDICTED: zinc finger homeobox protein 3-like [Cricetulus griseus]
Length = 3678
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2920 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2979
Query: 144 MKQQL 148
M +
Sbjct: 2980 MAKHF 2984
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2221 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2274
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2587 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2646
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2647 IAHEVGLKKRVVQVWFQNTRARERK 2671
>gi|345322211|ref|XP_003430546.1| PREDICTED: LIM/homeobox protein Lhx2-like [Ornithorhynchus
anatinus]
Length = 394
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 253 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 312
Query: 141 AL 142
L
Sbjct: 313 LL 314
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 23/160 (14%)
Query: 75 VSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKR 134
+G K R RT QL + + PD M+EQL +L+ ++VWFQN+R
Sbjct: 105 AAGDKKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRR 164
Query: 135 CKDKKRALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWK 194
K +K K++ QQ M GI VA +D +G T QP
Sbjct: 165 AKWRK-----KERFQQ-----------MAGIRQVALGADPYDISMGQRQNGYTQAQP--- 205
Query: 195 ALSDFALHTDLDRLDPSAAP--FQHLVSQMHGYELGHGPP 232
+ + T+ + P + P F + +Q Y PP
Sbjct: 206 --TQWTTTTNASCMAPQSNPASFMGVATQALSYLTSASPP 243
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+ R+RT QL T+++ + N PDA +QL + T LS RV++VWFQN R K ++
Sbjct: 402 RTKRMRTSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRN 461
Query: 141 ALAMKQQ 147
M+QQ
Sbjct: 462 --IMRQQ 466
>gi|195589796|ref|XP_002084635.1| GD14373 [Drosophila simulans]
gi|194196644|gb|EDX10220.1| GD14373 [Drosophila simulans]
Length = 642
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 421 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 480
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 481 MKKIQRKAKQ 490
>gi|976347|gb|AAC14462.1| zinc finger homeodomain protein [Homo sapiens]
gi|1585921|prf||2202255A AT motif-binding factor 1
Length = 3703
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2948 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3007
Query: 144 MKQQL 148
M +
Sbjct: 3008 MAKHF 3012
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2299
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2614 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2673
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2674 IAHEVGLKKRVVQVWFQNTRARERK 2698
>gi|395837017|ref|XP_003791442.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
[Otolemur garnettii]
Length = 3725
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2955 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3014
Query: 144 MKQQL 148
M +
Sbjct: 3015 MAKHF 3019
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2306
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2621 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2680
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2681 IAHEVGLKKRVVQVWFQNTRARERK 2705
>gi|355710346|gb|EHH31810.1| Zinc finger homeodomain protein 3 [Macaca mulatta]
Length = 3690
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2943 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3002
Query: 144 MKQQL 148
M +
Sbjct: 3003 MAKHF 3007
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2241 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2294
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2609 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2668
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2669 IAHEVGLKKRVVQVWFQNTRARERK 2693
>gi|344290755|ref|XP_003417103.1| PREDICTED: zinc finger homeobox protein 3 [Loxodonta africana]
Length = 3691
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2938 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2997
Query: 144 MKQQL 148
M +
Sbjct: 2998 MAKHF 3002
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2237 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2290
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2604 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2663
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2664 IAHEVGLKKRVVQVWFQNTRARERK 2688
>gi|334313043|ref|XP_001367139.2| PREDICTED: zinc finger homeobox protein 3 [Monodelphis domestica]
Length = 2658
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 1868 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 1927
Query: 144 MKQQL 148
M +
Sbjct: 1928 MAKHF 1932
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 1157 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 1210
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 1534 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 1593
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 1594 IAHEVGLKKRVVQVWFQNTRARERK 1618
>gi|281347541|gb|EFB23125.1| hypothetical protein PANDA_012821 [Ailuropoda melanoleuca]
Length = 3693
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2944 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3003
Query: 144 MKQQL 148
M +
Sbjct: 3004 MAKHF 3008
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2243 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2296
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2610 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2669
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2670 IAHEVGLKKRVVQVWFQNTRARERK 2694
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 266 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 325
Query: 141 ALAMKQQLQQEKDGRKM 157
L + + DG +
Sbjct: 326 VLRQENGGVDKADGTSL 342
>gi|351699624|gb|EHB02543.1| Zinc finger homeobox protein 3 [Heterocephalus glaber]
Length = 3731
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 3159 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3218
Query: 144 MKQQL 148
M +
Sbjct: 3219 MAKHF 3223
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2459 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2512
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2826 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2885
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2886 IAHEVGLKKRVVQVWFQNTRARERK 2910
>gi|195160505|ref|XP_002021116.1| GL25169 [Drosophila persimilis]
gi|194118229|gb|EDW40272.1| GL25169 [Drosophila persimilis]
Length = 613
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 394 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 453
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 454 MKKIQRKAKQ 463
>gi|109129073|ref|XP_001102605.1| PREDICTED: zinc finger homeobox protein 3-like isoform 2 [Macaca
mulatta]
Length = 3690
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2943 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3002
Query: 144 MKQQL 148
M +
Sbjct: 3003 MAKHF 3007
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2241 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2294
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2609 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2668
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2669 IAHEVGLKKRVVQVWFQNTRARERK 2693
>gi|118498345|ref|NP_008816.3| zinc finger homeobox protein 3 isoform A [Homo sapiens]
gi|108935822|sp|Q15911.2|ZFHX3_HUMAN RecName: Full=Zinc finger homeobox protein 3; AltName: Full=AT
motif-binding factor; AltName: Full=AT-binding
transcription factor 1; AltName: Full=Alpha-fetoprotein
enhancer-binding protein; AltName: Full=Zinc finger
homeodomain protein 3; Short=ZFH-3
gi|119579572|gb|EAW59168.1| AT-binding transcription factor 1, isoform CRA_a [Homo sapiens]
gi|119579574|gb|EAW59170.1| AT-binding transcription factor 1, isoform CRA_a [Homo sapiens]
Length = 3703
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2948 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3007
Query: 144 MKQQL 148
M +
Sbjct: 3008 MAKHF 3012
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2246 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2299
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2614 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2673
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2674 IAHEVGLKKRVVQVWFQNTRARERK 2698
>gi|410983863|ref|XP_003998256.1| PREDICTED: zinc finger homeobox protein 3 [Felis catus]
Length = 3687
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2937 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2996
Query: 144 MKQQL 148
M +
Sbjct: 2997 MAKHF 3001
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2236 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2289
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2603 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2662
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2663 IAHEVGLKKRVVQVWFQNTRARERK 2687
>gi|402908905|ref|XP_003917172.1| PREDICTED: zinc finger homeobox protein 3 [Papio anubis]
Length = 3688
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2941 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3000
Query: 144 MKQQL 148
M +
Sbjct: 3001 MAKHF 3005
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2239 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2292
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2607 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2666
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2667 IAHEVGLKKRVVQVWFQNTRARERK 2691
>gi|395748045|ref|XP_002826643.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3-like
[Pongo abelii]
Length = 3688
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2939 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2998
Query: 144 MKQQL 148
M +
Sbjct: 2999 MAKHF 3003
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2237 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2290
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL L Y + P M + + L RV++VWFQN R +++K
Sbjct: 2634 RLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERK 2689
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
+ R+RT QL T++T + N PDA +QL + T LS RV++VWFQN R K ++
Sbjct: 284 RTKRMRTSFKHHQLRTMKTYFALNQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRR 342
>gi|301776448|ref|XP_002923644.1| PREDICTED: zinc finger homeobox protein 3-like [Ailuropoda
melanoleuca]
Length = 3694
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2935 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2994
Query: 144 MKQQL 148
M +
Sbjct: 2995 MAKHF 2999
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2234 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2287
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2601 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2660
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2661 IAHEVGLKKRVVQVWFQNTRARERK 2685
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Takifugu
rubripes]
Length = 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
+P R RT+L +Q + + + +P ++E L T LS RV++VWFQN+R K KK
Sbjct: 192 RPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKL 251
Query: 141 ALAMKQQLQQEKD---GRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALS 197
A +QQ +Q+ G+++ M+G+ MN+ T PP + L
Sbjct: 252 ARRQQQQQEQQNSQRLGQEVMSNRMEGM---------------MNSF--TPLAPPQQQL- 293
Query: 198 DFALHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAHPDSTDSYVTYL 257
+D+ S PFQ G PP PGD +P DS + +
Sbjct: 294 -----VAMDQNGYSTDPFQ------------QGLTPPQ----MPGDHMNPYGNDSILHDI 332
Query: 258 ESDDSL 263
+SD SL
Sbjct: 333 DSDTSL 338
>gi|301771528|ref|XP_002921170.1| PREDICTED: homeobox protein prophet of Pit-1-like [Ailuropoda
melanoleuca]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 71 RVRKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIR 127
R+ G G+P R RT + QL L T + N PD +E L T+LS I+
Sbjct: 55 RLSPQGGQRGRPHSRRRHRTTFSPAQLEQLETAFGRNQYPDIWAREGLARDTSLSEARIQ 114
Query: 128 VWFQNKRCKDKKRALAMKQQL 148
VWFQN+R K +K+ ++ Q L
Sbjct: 115 VWFQNRRAKQRKQERSLLQPL 135
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 393 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 452
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 453 MKKIQRKAKQ 462
>gi|410050584|ref|XP_003315250.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger homeobox protein 3 [Pan
troglodytes]
Length = 3679
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2935 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 2994
Query: 144 MKQQL 148
M +
Sbjct: 2995 MAKHF 2999
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2233 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2286
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2601 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2660
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2661 IAHEVGLKKRVVQVWFQNTRARERK 2685
>gi|403298408|ref|XP_003940013.1| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 3704
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2956 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3015
Query: 144 MKQQL 148
M +
Sbjct: 3016 MAKHF 3020
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2253 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2306
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2622 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2681
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2682 IAHEVGLKKRVVQVWFQNTRARERK 2706
>gi|403298406|ref|XP_003940012.1| PREDICTED: zinc finger homeobox protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 3695
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2947 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3006
Query: 144 MKQQL 148
M +
Sbjct: 3007 MAKHF 3011
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2244 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2297
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2613 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2672
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2673 IAHEVGLKKRVVQVWFQNTRARERK 2697
>gi|336269551|ref|XP_003349536.1| hypothetical protein SMAC_03124 [Sordaria macrospora k-hell]
gi|380093389|emb|CCC09047.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 645
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 91 EKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDK---KRAL----- 142
+ QL TL +N NP P A ++E++ E N++ R +++WFQN+R K K K++L
Sbjct: 114 QDQLTTLEMEFNKNPTPTATVRERIAEEINMTERSVQIWFQNRRAKIKLLAKKSLESGED 173
Query: 143 ------AMKQQL--QQEKDGRKMGYGSMQGI 165
+M+Q L Q + G+ +GY G+
Sbjct: 174 MDSIPESMRQYLAMQAMESGKGLGYFGRTGL 204
>gi|73957122|ref|XP_851092.1| PREDICTED: zinc finger homeobox protein 3 isoform 2 [Canis lupus
familiaris]
Length = 3710
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2956 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3015
Query: 144 MKQQL 148
M +
Sbjct: 3016 MAKHF 3020
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2255 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2308
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGDG--KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2622 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2681
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2682 IAHEVGLKKRVVQVWFQNTRARERK 2706
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1 [Nomascus
leucogenys]
Length = 374
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQN 132
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQN 230
>gi|17380175|sp|Q9W751.1|PITX1_XENLA RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
PITX1; Short=X-PITX-1; Short=xPitx1; AltName:
Full=Paired-like homeodomain transcription factor 1
gi|5566001|gb|AAD45292.1|AF155206_1 homeodomain transcription factor Pitx-1 [Xenopus laevis]
Length = 305
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + N PD M+E++ TNL+ +RVWF+N+R K +KR
Sbjct: 77 KQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNRRAKWRKR 136
Query: 141 ALAMKQQLQQEKDGRKMGY 159
+ Q+ D K GY
Sbjct: 137 ------ERNQQMDLCKNGY 149
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 1 SSESGSTKGGIVSRTSSSGKVSGGDG---------KPTRVRTVLNEKQLHTLRTCYNANP 51
+SES T+ RT G+ G DG K R RT +QL L + N
Sbjct: 45 ASESSDTEIAEKERT---GEPKGEDGNGDDPSKKKKQRRQRTHFTSQQLQELEATFQRNR 101
Query: 52 RPDALMKEQLVEMTNLFLGRVR 73
PD M+E++ TNL RVR
Sbjct: 102 YPDMSMREEIAVWTNLTEARVR 123
>gi|358333892|dbj|GAA52349.1| retinal homeobox protein Rx [Clonorchis sinensis]
Length = 1096
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 11 IVSRTSSSGKVSGGDGKPTRVRTVLNEKQLHTLRT-CYNANPRPDALMKEQLVEMTNLFL 69
I++ + S +S G + +N LH+ R+ C A+ ++ ++ + + L
Sbjct: 308 ILNSMNLSNSLSTLRGHQATTQREMNSGHLHSPRSPCSPAS----TVLHDEASSVAKMLL 363
Query: 70 GR-VRKVSGGDGKPT----RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPR 124
G S PT R RT +++QL L + + + PD +E+L MT L+
Sbjct: 364 GEHTGHYSTTASCPTPARRRHRTTFSQEQLQELESAFQKSHYPDIYCREELARMTKLNEA 423
Query: 125 VIRVWFQNKRCKDKKRALAMKQQ 147
I+VWFQN+R K +K+ + +Q
Sbjct: 424 RIQVWFQNRRAKYRKQEKQLAKQ 446
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L Q + + +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 193 DGRRGPKRPRTILTSAQRRQFKAAFEVSPKPCRKVREALAKETGLSVRVVQVWFQNQRAK 252
Query: 137 DKK 139
KK
Sbjct: 253 MKK 255
>gi|260816834|ref|XP_002603292.1| homeobox protein-like protein [Branchiostoma floridae]
gi|229288611|gb|EEN59303.1| homeobox protein-like protein [Branchiostoma floridae]
Length = 317
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 83 TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
TR RT + QL L + P PD +E+L NLS ++VWFQN+R K +KR
Sbjct: 97 TRYRTTFSTYQLEELEKAFERAPYPDVFAREELAMRLNLSEARVQVWFQNRRAKWRKR 154
>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
menziesii]
Length = 839
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L YN P+P +L ++QL+ ++++ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERLYNDCPKPSSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|148233752|ref|NP_001080981.1| pituitary homeobox 1 [Xenopus laevis]
gi|6851371|gb|AAF29531.1|AF217647_1 pituitary homeobox gene 1 paired-like homeodomain transcription
factor [Xenopus laevis]
gi|213624932|gb|AAI69446.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213625070|gb|AAI69749.1| Pitx1 protein [Xenopus laevis]
gi|213626444|gb|AAI69444.1| Pituitary homeobox gene 1 paired-likehomeodomain transcription
factor [Xenopus laevis]
gi|213626626|gb|AAI69747.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + N PD M+E++ TNL+ +RVWF+N+R K +KR
Sbjct: 77 KQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNRRAKWRKR 136
Query: 141 ALAMKQQLQQEKDGRKMGY 159
+ Q+ D K GY
Sbjct: 137 ------ERNQQMDLCKNGY 149
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 1 SSESGSTKGGIVSRTSSSGKVSGGDG---------KPTRVRTVLNEKQLHTLRTCYNANP 51
+SES T+ RT G+ G DG K R RT +QL L + N
Sbjct: 45 ASESSDTEIAEKERT---GEPKGEDGNGDDPSKKKKQRRQRTHFTSQQLQELEATFQRNR 101
Query: 52 RPDALMKEQLVEMTNLFLGRVR 73
PD M+E++ TNL RVR
Sbjct: 102 YPDMSMREEIAVWTNLTEARVR 123
>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
vinifera]
gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P +L ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 25 EQVEALERLYHDCPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 84
Query: 148 LQQEK 152
K
Sbjct: 85 AVNRK 89
>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
[Vitis vinifera]
Length = 862
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 92 KQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRVIRVWFQNKRCKDKKRALAMKQQ 147
+Q+ L Y+ P+P ++ ++QL+ ++N+ P+ I+VWFQN+RC++K+R A + Q
Sbjct: 24 EQVEALERVYSECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQ 83
Query: 148 LQQEK 152
K
Sbjct: 84 TVNRK 88
>gi|198464782|ref|XP_001353366.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
gi|198149877|gb|EAL30873.2| GA16684 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 79 DGK--PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCK 136
DG+ P R RT+L +Q + ++ +P+P ++E L + T LS RV++VWFQN+R K
Sbjct: 401 DGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 460
Query: 137 DKKRALAMKQ 146
KK KQ
Sbjct: 461 MKKIQRKAKQ 470
>gi|146331998|gb|ABQ22505.1| LIM homeobox protein Lhx2-like protein [Callithrix jacchus]
Length = 197
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R+RT QL T+++ + N PDA +QL + T L+ RV++VWFQN R K ++
Sbjct: 56 KTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRN 115
Query: 141 AL 142
L
Sbjct: 116 LL 117
>gi|148539550|ref|NP_001091900.1| pituitary homeobox 1 [Xenopus laevis]
gi|10798738|emb|CAC12834.1| Pitx1 protein [Xenopus laevis]
Length = 305
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + N PD M+E++ TNL+ +RVWF+N+R K +KR
Sbjct: 77 KQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEARVRVWFKNRRAKWRKR 136
Query: 141 ALAMKQQLQQEKDGRKMGY 159
+ Q+ D K GY
Sbjct: 137 ------ERNQQMDLCKNGY 149
>gi|417414463|gb|JAA53524.1| Putative homeobox protein, partial [Desmodus rotundus]
Length = 3518
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L++C+N P L E L L RV++VWFQN R K+KK L+
Sbjct: 2951 RFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLS 3010
Query: 144 MKQQL 148
M +
Sbjct: 3011 MAKHF 3015
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + QL L+ ++AN P EQL + NL RVI VWFQN R K +K
Sbjct: 2250 RTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARK 2303
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 57 MKEQLVEMTNLFLGRVRKVSGGD--GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQ 114
+K +L E + G +GG+ + R+RT + +QL L Y + P M +
Sbjct: 2617 LKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDH 2676
Query: 115 LVEMTNLSPRVIRVWFQNKRCKDKK 139
+ L RV++VWFQN R +++K
Sbjct: 2677 IAHEVGLKKRVVQVWFQNTRARERK 2701
>gi|313227183|emb|CBY22330.1| unnamed protein product [Oikopleura dioica]
Length = 323
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 11 IVSRTSSSGKVS-GGDGKPTRVRTVLNEKQ--LHTLRTCYNANPRPDALMKEQLVEMTNL 67
I++R + +G++ G G R +V NE + + LR + ++E++V+
Sbjct: 55 ILTRFNKTGEIKPGASGGSKRRSSVTNENECLIVELRQQFAYAWE----LREEMVKRGAK 110
Query: 68 FLGRVRKV-SGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
+ V ++ KP R R+ + Q+ L + + PD M+E+L +TNLS +
Sbjct: 111 KVPSVDQIKQAAPTKPRRARSNFTQAQVEALESAFLKTHYPDVYMREELSSLTNLSENRV 170
Query: 127 RVWFQNKRCKDKKRALAMK 145
++WF N+R + +K+ A +
Sbjct: 171 QIWFSNRRARYRKQCHAQQ 189
>gi|118791388|ref|XP_552873.2| AGAP008980-PA [Anopheles gambiae str. PEST]
gi|116117575|gb|EAL38999.2| AGAP008980-PA [Anopheles gambiae str. PEST]
Length = 267
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 67 LFLGRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVI 126
L LG R + G + R+RT QL T+++ + N PDA +QL + T L RV+
Sbjct: 152 LDLGFSRGL-GSSSRAKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVL 210
Query: 127 RVWFQNKRCKDKKRALAMKQQ 147
+VWFQN R K R + MKQ+
Sbjct: 211 QVWFQNARA--KWRRMMMKQE 229
>gi|1764092|gb|AAB39864.1| paired-like homeodomain protein PRX2 [Homo sapiens]
Length = 164
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAM 144
RT N QL L + PDA ++E+L NLS ++VWFQN+R K ++ AM
Sbjct: 19 RTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 77
>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
Length = 843
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 70 GRVRKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
G + K +GK R + +Q+ L Y P+P +L ++QL+ + N+ P+
Sbjct: 16 GSLNKHLADNGKYVRYTS----EQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQ 71
Query: 126 IRVWFQNKRCKDKKR 140
I+VWFQN+RC++K+R
Sbjct: 72 IKVWFQNRRCREKQR 86
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,774,142,963
Number of Sequences: 23463169
Number of extensions: 208067958
Number of successful extensions: 442305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9569
Number of HSP's successfully gapped in prelim test: 1607
Number of HSP's that attempted gapping in prelim test: 425401
Number of HSP's gapped (non-prelim): 17718
length of query: 269
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 129
effective length of database: 9,074,351,707
effective search space: 1170591370203
effective search space used: 1170591370203
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 75 (33.5 bits)