BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4078
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53405|ISL1_DANRE Insulin gene enhancer protein isl-1 OS=Danio rerio GN=isl1 PE=2
SV=1
Length = 349
Score = 197 bits (500), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 121/177 (68%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SILMK-QLQQQQPNDKTNIQGMTGTPMVATSPERHDGGLQANQVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 113/142 (79%), Gaps = 8/142 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALM+EQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMREQLVEMTGLSPRVIRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGI---PMVASSPVRHDSPIGMNALEVTSYQPPWKALS 197
++ MKQ QQ+ + + S+QG+ P+VA SP+RHD+ + N++EV +YQPPWKALS
Sbjct: 250 SILMKQLQQQQHSDKTVSIFSLQGLTGTPLVARSPIRHDNTVQGNSVEVQTYQPPWKALS 309
Query: 198 DFALHTDLDRLDPSAAPFQHLV 219
+FAL +DLD+ FQ LV
Sbjct: 310 EFALQSDLDQ-----PAFQQLV 326
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 189 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 248
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ+ K + G P+VA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 249 SIFMK-QLQQQHHSDKTNLQGLTGTPLVAGSPIRHDNTVQGNPVEVQTYQPPWKALSEFA 307
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 308 LQSDLDQ-----PAFQQLVS 322
>sp|P53410|ISL2_CHICK Insulin gene enhancer protein ISL-2 (Fragment) OS=Gallus gallus
GN=ISL2 PE=2 SV=1
Length = 319
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 113/140 (80%), Gaps = 5/140 (3%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 149 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 208
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SPVRH+S + +A+EV +YQPPWKALSDFA
Sbjct: 209 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPVRHESAVQGSAVEVQTYQPPWKALSDFA 267
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +D L+P AA FQ LVS
Sbjct: 268 LQSD---LEPPAA-FQQLVS 283
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHNDKTNLQGLTGTPLVAGSPIRHDTTVQGNPVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>sp|P61374|ISL1_RAT Insulin gene enhancer protein ISL-1 OS=Rattus norvegicus GN=Isl1
PE=2 SV=1
Length = 349
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P61372|ISL1_MOUSE Insulin gene enhancer protein ISL-1 OS=Mus musculus GN=Isl1 PE=1
SV=1
Length = 349
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P61373|ISL1_MESAU Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus GN=ISL1
PE=2 SV=1
Length = 349
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P61371|ISL1_HUMAN Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1
SV=1
Length = 349
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P50211|ISL1_CHICK Insulin gene enhancer protein ISL-1 OS=Gallus gallus GN=ISL1 PE=2
SV=1
Length = 349
Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 120/177 (67%), Gaps = 14/177 (7%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 180 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 239
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K M G PMVA+SP RHD + N +EV SYQPPWK LSDFA
Sbjct: 240 SIMMK-QLQQQQPNDKTNIQGMTGTPMVAASPERHDGGLQANPVEVQSYQPPWKVLSDFA 298
Query: 201 LHTDLDRLDPSAAPFQHLVSQMHGYELGHGPPPPHDMGPTPGDMAH--PDSTDSYVT 255
L +D+D+ FQ LV+ G P + G M+ PD+ +S V
Sbjct: 299 LQSDIDQ-----PAFQQLVN------FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 109/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 171 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 230
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
+ MK QLQQ+ K + G PMVA SP+RHD+ + N +EV +YQPPWKALS+FA
Sbjct: 231 TIFMK-QLQQQHHIDKTNLQGLTGTPMVAGSPIRHDNTVLGNPVEVQTYQPPWKALSEFA 289
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ F+ LVS
Sbjct: 290 LQSDLDQ-----PAFRQLVS 304
>sp|Q9CXV0|ISL2_MOUSE Insulin gene enhancer protein ISL-2 OS=Mus musculus GN=Isl2 PE=1
SV=2
Length = 359
Score = 192 bits (487), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKASLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 111/140 (79%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G P+VA SP+RH++ + +A+EV +YQPPWKALS+FA
Sbjct: 250 SILMK-QLQQQQHSDKTSLQGLTGTPLVAGSPIRHENAVQGSAVEVQTYQPPWKALSEFA 308
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 309 LQSDLDQ-----PAFQQLVS 323
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/140 (67%), Positives = 107/140 (76%), Gaps = 7/140 (5%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKKR
Sbjct: 190 KTTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKR 249
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MKQ QQ G K M G +VA SP+RH+ + + ++V +YQPPWKALS+FA
Sbjct: 250 SILMKQLQQQH--GDKTNLQGMTGTALVAGSPIRHNPSVPGHPVDVQAYQPPWKALSEFA 307
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 308 LQSDLDQ-----PAFQQLVS 322
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 108/140 (77%), Gaps = 6/140 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K TRVRTVLNEKQLHTLRTCY ANPRPDALMKEQLVEMT LSPRVIRVWFQNKRCKDKK+
Sbjct: 191 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKK 250
Query: 141 ALAMKQQLQQEKDGRKMGYGSMQGIPMVASSPVRHDSPIGMNALEVTSYQPPWKALSDFA 200
++ MK QLQQ++ K + G +VA SP H++ + +A+EV +YQPPWKALS+FA
Sbjct: 251 SILMK-QLQQQQHSDKASLQGLTGTLLVAGSPSAHENAVQGSAVEVQTYQPPWKALSEFA 309
Query: 201 LHTDLDRLDPSAAPFQHLVS 220
L +DLD+ FQ LVS
Sbjct: 310 LQSDLDQ-----PAFQQLVS 324
>sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa GN=LHX3 PE=2
SV=1
Length = 383
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 144 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 199
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 144 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 181
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 196
>sp|Q90421|LHX3_DANRE LIM/homeobox protein Lhx3 OS=Danio rerio GN=lhx3 PE=2 SV=1
Length = 398
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
D R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+
Sbjct: 150 ADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDMRVVQVWFQNRRAKE 209
Query: 138 KK 139
K+
Sbjct: 210 KR 211
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 18 SGKVSGGDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
+ K D R RT + KQL TL+ YN +P+P ++EQL T L + RV +V
Sbjct: 144 TAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARHVREQLSTETGLDM-RVVQV 200
>sp|P50481|LHX3_MOUSE LIM/homeobox protein Lhx3 OS=Mus musculus GN=Lhx3 PE=1 SV=1
Length = 400
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 217
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL++ YN +P+P ++EQL T L
Sbjct: 162 RPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGL 199
>sp|Q25132|LHX3_HALRO LIM/homeobox protein Lhx3 OS=Halocynthia roretzi GN=LHX3 PE=2 SV=2
Length = 692
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL++ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 412 RPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 467
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
R RT + KQL TL++ YN +P+P ++EQL T L + RV +V
Sbjct: 412 RPRTTITAKQLETLKSAYNQSPKPARHVREQLSSETGLDM-RVVQV 456
>sp|P53412|LHX3_CHICK LIM/homeobox protein Lhx3 OS=Gallus gallus GN=LHX3 PE=2 SV=1
Length = 395
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 193
>sp|P36200|LHX3_XENLA LIM/homeobox protein Lhx3 OS=Xenopus laevis GN=lhx3 PE=1 SV=1
Length = 395
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ YN +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 211
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL+ YN +P+P ++EQL T L
Sbjct: 156 RPRTTITAKQLETLKNAYNNSPKPARHVREQLSSETGL 193
>sp|Q9H2C1|LHX5_HUMAN LIM/homeobox protein Lhx5 OS=Homo sapiens GN=LHX5 PE=2 SV=1
Length = 402
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P61376|LHX5_RAT LIM/homeobox protein Lhx5 OS=Rattus norvegicus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P61375|LHX5_MOUSE LIM/homeobox protein Lhx5 OS=Mus musculus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis
GN=LHX1 PE=2 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|Q5IS44|LHX1_PANTR LIM/homeobox protein Lhx1 OS=Pan troglodytes GN=LHX1 PE=2 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P63007|LHX1_RAT LIM/homeobox protein Lhx1 OS=Rattus norvegicus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P63006|LHX1_MOUSE LIM/homeobox protein Lhx1 OS=Mus musculus GN=Lhx1 PE=1 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P63008|LHX1_MESAU LIM/homeobox protein Lhx1 OS=Mesocricetus auratus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P48742|LHX1_HUMAN LIM/homeobox protein Lhx1 OS=Homo sapiens GN=LHX1 PE=1 SV=2
Length = 406
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P53411|LHX1_CHICK LIM/homeobox protein Lhx1 OS=Gallus gallus GN=LHX1 PE=2 SV=1
Length = 406
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|Q90476|LHX1_DANRE LIM/homeobox protein Lhx1 OS=Danio rerio GN=lhx1a PE=2 SV=1
Length = 405
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 80 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
GK RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++
Sbjct: 177 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR 236
Query: 140 RALAMKQ 146
MKQ
Sbjct: 237 ----MKQ 239
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 26 GKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
GK RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 177 GKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 225
>sp|P29674|LHX1_XENLA LIM/homeobox protein Lhx1 OS=Xenopus laevis GN=lhx1 PE=1 SV=1
Length = 403
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 238
Query: 146 Q 146
Q
Sbjct: 239 Q 239
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 183 RTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNM-RVIQV 225
>sp|P52889|LHX5_DANRE LIM/homeobox protein Lhx5 OS=Danio rerio GN=lhx5 PE=2 SV=1
Length = 399
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 34.3 bits (77), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFVATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P37137|LHX5_XENLA LIM/homeobox protein Lhx5 OS=Xenopus laevis GN=lhx5 PE=1 SV=2
Length = 402
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL + T L+ RVI+VWFQN+R K+++ MK
Sbjct: 184 RTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERR----MK 239
Query: 146 Q 146
Q
Sbjct: 240 Q 240
Score = 34.3 bits (77), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL + T L + RV +V
Sbjct: 184 RTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNM-RVIQV 226
>sp|P53776|LHX4_MOUSE LIM/homeobox protein Lhx4 OS=Mus musculus GN=Lhx4 PE=1 SV=4
Length = 390
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL+ Y +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGL 196
>sp|Q969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 OS=Homo sapiens GN=LHX4 PE=1 SV=2
Length = 390
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R RT + KQL TL+ Y +P+P ++EQL T L RV++VWFQN+R K+K+
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKR 214
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 30 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
R RT + KQL TL+ Y +P+P ++EQL T L
Sbjct: 159 RPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGL 196
>sp|P20271|HM14_CAEEL Homeobox protein ceh-14 OS=Caenorhabditis elegans GN=ceh-14 PE=2
SV=3
Length = 351
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 78 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKD 137
GDG R RT ++ K L TL+ Y + +P ++EQL T L RV++VWFQN+R K+
Sbjct: 176 GDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKE 235
Query: 138 KK 139
K+
Sbjct: 236 KR 237
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 24 GDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
GDG R RT ++ K L TL+ Y + +P ++EQL T L
Sbjct: 176 GDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGL 219
>sp|Q8JI10|DMX1A_DANRE Diencephalon/mesencephalon homeobox protein 1-A OS=Danio rerio
GN=dmbx1a PE=2 SV=1
Length = 388
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKD 153
++ K+QLQ++KD
Sbjct: 130 QRSLQKEQLQKQKD 143
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
K R RT +QL L + PD +M+E+L TNL RV+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 116
>sp|P20154|LIN11_CAEEL Protein lin-11 OS=Caenorhabditis elegans GN=lin-11 PE=1 SV=2
Length = 405
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALAMK 145
RT + KQL TL+ + A P+P ++EQL T L+ RVI+VWFQN+R K+++ MK
Sbjct: 245 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERR----MK 300
Query: 146 Q 146
Q
Sbjct: 301 Q 301
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVRKV 75
RT + KQL TL+ + A P+P ++EQL T L + RV +V
Sbjct: 245 RTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNM-RVIQV 287
>sp|Q91ZK4|DMBX1_MOUSE Diencephalon/mesencephalon homeobox protein 1 OS=Mus musculus
GN=Dmbx1 PE=1 SV=1
Length = 381
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
K R RT +QL L + PD +M+E+L TNL RV+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 116
>sp|Q8NFW5|DMBX1_HUMAN Diencephalon/mesencephalon homeobox protein 1 OS=Homo sapiens
GN=DMBX1 PE=1 SV=1
Length = 382
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 129
Query: 141 ALAM-KQQLQQEKDG 154
++ K+QLQ++K+
Sbjct: 130 QRSLQKEQLQKQKEA 144
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
K R RT +QL L + PD +M+E+L TNL RV+
Sbjct: 70 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 116
>sp|Q8SW18|HD10_ENCCU Homeobox protein HD-10 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=HD-10 PE=4 SV=1
Length = 227
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKRALA 143
R RT + QL L + N RPDA M+++L E ++PR ++VWFQN+R K KK L
Sbjct: 34 RKRTT--KAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWFQNRRAKIKK--LT 89
Query: 144 MKQQLQQE 151
K+ +QQE
Sbjct: 90 QKKMMQQE 97
>sp|Q8IRC7|AWH_DROME LIM/homeobox protein Awh OS=Drosophila melanogaster GN=Awh PE=1
SV=1
Length = 275
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 78 GDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNK 133
GDG K RVRT E+QL L+ + + PD E++ +T LS RV +VWFQN
Sbjct: 140 GDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGLSKRVTQVWFQNS 199
Query: 134 RCKDKKRALAMKQQLQQ 150
R + KK A K ++++
Sbjct: 200 RARQKKHIHAGKNKIRE 216
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 15 TSSSGKVSGGDG----KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNL 67
T+SS + GDG K RVRT E+QL L+ + + PD E++ +T L
Sbjct: 131 TTSSDEGCDGDGYHKSKTKRVRTTFTEEQLQVLQANFQIDSNPDGQDLERIASVTGL 187
>sp|P28167|ZFH2_DROME Zinc finger protein 2 OS=Drosophila melanogaster GN=zfh2 PE=1 SV=2
Length = 3005
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 84 RVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
R+RT + +QL+ L CY + P M E++ + NL RV++VWFQN R KDKK
Sbjct: 2762 RLRTTILPEQLNFLYECYQSESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKK 2817
Score = 35.4 bits (80), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 86 RTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKK 139
RT + Q+ L+ + N P E L ++ LSPRVI VWFQN R K +K
Sbjct: 2158 RTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRK 2211
>sp|Q566X8|DMX1B_DANRE Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio
GN=dmbx1b PE=2 SV=1
Length = 369
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 81 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRVIRVWFQNKRCKDKKR 140
K R RT +QL L + PD +M+E+L TNL ++VWF+N+R K +K+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKK 124
Query: 141 ALAM-KQQLQQEKDGRKMGY---GSMQGIPMVASSP 172
++ K+QLQ+ K+ G G + P+ A +P
Sbjct: 125 QRSLQKEQLQRLKEAGTEGAQDEGKEEAPPVEAQAP 160
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 27 KPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLFLGRVR 73
K R RT +QL L + PD +M+E+L TNL RV+
Sbjct: 65 KQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQ 111
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B
PE=1 SV=2
Length = 379
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b
PE=2 SV=2
Length = 372
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 70 GRVRKVSGGDGK----PTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTNLSPRV 125
G K SG DGK P R RT+L +Q + + + +P ++E L T LS RV
Sbjct: 180 GSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRV 239
Query: 126 IRVWFQNKRCKDKKRA 141
++VWFQN+R K KK A
Sbjct: 240 VQVWFQNQRAKMKKLA 255
>sp|Q6AST1|HOX32_ORYSJ Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp.
japonica GN=HOX32 PE=2 SV=1
Length = 859
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 73 RKVSGGDGKP---TRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVE----MTNLSPRV 125
R GG G P T +Q+ L Y P+P +L ++QL+ ++N+ P+
Sbjct: 17 RSSPGGGGAPQVDTGKYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQ 76
Query: 126 IRVWFQNKRCKDKKRALAMKQQLQQEK 152
I+VWFQN+RC++K+R A + Q K
Sbjct: 77 IKVWFQNRRCREKQRKEASRLQTVNRK 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,801,848
Number of Sequences: 539616
Number of extensions: 4929916
Number of successful extensions: 11933
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 10457
Number of HSP's gapped (non-prelim): 1580
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)