Query psy4079
Match_columns 294
No_of_seqs 232 out of 1459
Neff 7.5
Searched_HMMs 46136
Date Sat Aug 17 00:46:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4079.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4079hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2058|consensus 100.0 3.5E-41 7.5E-46 319.0 14.2 208 62-274 155-383 (436)
2 KOG2223|consensus 100.0 6.5E-39 1.4E-43 296.4 7.1 221 32-262 272-528 (586)
3 smart00164 TBC Domain in Tre-2 100.0 1.5E-34 3.3E-39 250.8 12.5 174 61-239 2-198 (199)
4 COG5210 GTPase-activating prot 100.0 1.1E-32 2.4E-37 270.6 13.9 205 62-270 211-439 (496)
5 PF00566 RabGAP-TBC: Rab-GTPas 100.0 1.9E-31 4.1E-36 232.8 14.3 184 67-258 2-214 (214)
6 KOG2222|consensus 100.0 1.1E-29 2.3E-34 237.7 8.5 212 62-275 169-402 (848)
7 KOG4567|consensus 99.9 7E-28 1.5E-32 215.9 11.7 190 88-280 120-351 (370)
8 KOG1092|consensus 99.9 3E-27 6.4E-32 219.0 13.9 205 61-274 186-453 (484)
9 KOG4436|consensus 99.9 8.8E-27 1.9E-31 228.8 12.4 209 59-271 572-804 (948)
10 KOG1093|consensus 99.9 8.4E-27 1.8E-31 222.5 11.6 220 62-287 354-591 (725)
11 KOG4347|consensus 99.9 2E-26 4.3E-31 223.0 12.5 212 62-282 201-432 (671)
12 KOG1102|consensus 99.9 1.9E-24 4.2E-29 206.2 8.6 206 62-273 144-367 (397)
13 KOG2221|consensus 99.8 1.4E-20 3.1E-25 161.5 5.7 168 41-214 81-267 (267)
14 KOG2224|consensus 99.8 7E-19 1.5E-23 163.8 10.7 196 62-260 434-698 (781)
15 KOG2595|consensus 99.8 1.4E-18 3.1E-23 157.8 9.6 197 66-267 64-276 (395)
16 KOG1091|consensus 99.7 1.9E-17 4.1E-22 158.7 11.4 186 90-281 106-357 (625)
17 KOG2197|consensus 99.7 8.5E-17 1.8E-21 156.9 7.5 160 94-261 244-411 (488)
18 KOG4436|consensus 99.6 6.7E-16 1.5E-20 152.7 5.3 215 57-271 177-418 (948)
19 KOG3636|consensus 99.3 1.3E-11 2.9E-16 116.0 10.8 136 130-270 107-248 (669)
20 KOG2801|consensus 98.5 6.7E-07 1.5E-11 81.0 9.1 126 130-256 127-254 (559)
21 PF14961 BROMI: Broad-minded p 96.8 0.01 2.2E-07 63.1 10.8 146 132-277 1100-1263(1296)
22 KOG1648|consensus 85.9 0.043 9.3E-07 53.5 -5.0 116 130-254 645-766 (813)
23 KOG2224|consensus 62.6 2.5 5.5E-05 40.8 0.1 34 130-163 565-599 (781)
24 PF10815 ComZ: ComZ; InterPro 55.1 21 0.00046 24.3 3.5 39 183-221 5-43 (56)
25 KOG1102|consensus 48.0 4.5 9.8E-05 39.1 -0.9 92 168-260 47-138 (397)
26 PF08109 Antimicrobial14: Lact 32.7 23 0.00049 20.6 0.8 14 131-144 3-16 (31)
27 PF13041 PPR_2: PPR repeat fam 21.1 1.2E+02 0.0027 19.2 2.9 26 194-219 24-49 (50)
No 1
>KOG2058|consensus
Probab=100.00 E-value=3.5e-41 Score=318.97 Aligned_cols=208 Identities=38% Similarity=0.536 Sum_probs=184.4
Q ss_pred cCCCCCccc-chHHHHhhhhCCC------------ccc--ccccccc-cccCCCCCc-chhcccCCCCchhHHHHHHHhh
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLNLP------------VES--RVVGCPS-KSAGNWPKQ-AIVFLNLPVDSGVVVNALDFGS 124 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~~~------------~~~--~~~~~i~-dv~Rtfp~~-~~f~~~~~~~~~~~~~~l~l~~ 124 (294)
+|||+.+|| ||..+.|.....+ .++ ...++|+ |+.||||++ ..|....+ .+.+.|++++
T Consensus 155 kGiP~~~R~~VW~~~~g~~~~~~~~~~yq~ll~~~~~~~~~~~~qI~~DL~RTfP~n~~~~~~~~~----~~~~~LrRvL 230 (436)
T KOG2058|consen 155 KGIPPELRGEVWWVLSGARRQLNYPGYYQELLRKGDEKKSPVVKQIKLDLPRTFPDNFKGFDSEDS----DGRQTLRRVL 230 (436)
T ss_pred cCCChhhhhHHHHHHhcchhhccCchhHHHHHhcCCCccchHHHHHHhccccccCCCcccCCCCCc----hHHHHHHHHH
Confidence 899999999 9999998322222 112 3677787 999999999 56655433 2256666777
Q ss_pred hHhhh---cCccccCchHHHHHhccCCC-HHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHh
Q psy4079 125 GGWWF---ESNYCQGTGMIAASLLLLME-EEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLL 200 (294)
Q Consensus 125 i~~~~---~iGY~QGM~~Iaa~LL~~~~-E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~ 200 (294)
++++. +||||||||++||++|++++ ||+|||+|+.+++++++. ||++++.|.+..+.+++.+++..+|+|+.||.
T Consensus 231 ~Aya~hNp~vGYCQGmNflAallLL~~~~EE~AFW~Lv~iie~~lp~-Yyt~nL~g~qvDQ~VL~~llre~lPkl~~~l~ 309 (436)
T KOG2058|consen 231 LAYARHNPSVGYCQGMNFLAALLLLLMPSEEDAFWMLVALIENYLPR-YYTPNLIGSQVDQKVLRELLREKLPKLSLHLE 309 (436)
T ss_pred HHHHhhCCCCcchhhHHHHHHHHHHhcCChHHHHHHHHHHHHHhchh-hcCchhhhhhccHHHHHHHHHHHCHHHHHhhh
Confidence 77766 99999999999999999998 999999999999999995 99999999999999999999999999999999
Q ss_pred hCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhcccc
Q psy4079 201 QHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVYQ 274 (294)
Q Consensus 201 ~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~~ 274 (294)
..+++..+++.+||+++|+...|.++++||||.+|+||.+++|++|+|+++..+++|+++++..++++.+....
T Consensus 310 ~~~~~~~l~t~~wfLt~f~d~lP~~t~LrIwD~~f~eGskvlfr~Alai~k~~ee~il~~~~~~~i~~~~~~~~ 383 (436)
T KOG2058|consen 310 GNGVDASLETLPWFLTLFVDILPSETVLRIWDCLFYEGSKVLFRVALAILKKHEEEILKEDSSKEILRVLPDLT 383 (436)
T ss_pred hcCCCeeeeehhhhHHHhcccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHhHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998885433
No 2
>KOG2223|consensus
Probab=100.00 E-value=6.5e-39 Score=296.45 Aligned_cols=221 Identities=22% Similarity=0.354 Sum_probs=192.1
Q ss_pred eEEEEeccccccCCcchhhhhcCCCcceee-cCCCCCccc-chHHHHhhhhCCCcc------------------------
Q psy4079 32 SLVCIVGSKCAGNWPKQAIVFLNLPVESRV-VGCPSKSAG-NWPKQAIVFLNLPVE------------------------ 85 (294)
Q Consensus 32 ~~~~~~~~~~~~~w~~~~~~~~~~~~~sr~-~GIP~~lRg-vW~~L~~~~~~~~~~------------------------ 85 (294)
+.|+||+..++.||.+-..+. .+...+ .|||+++|| ||...+|+.+++..+
T Consensus 272 ~~v~vW~~eILpnWe~m~~Sr---R~relWwQGiP~~VRGkvW~laIGNel~it~elfd~~la~Aker~ak~~aeq~~~s 348 (586)
T KOG2223|consen 272 YAVNVWENEILPNWEDMLKSR---RVRELWWQGIPPSVRGKVWSLAIGNELNITYELFDIALARAKEREAKSLAEQMSNS 348 (586)
T ss_pred HHHHHHHHHhccchHHHHhhH---HHHHHHHccCChhhcchhhHhhhCcccccCHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 568999999999999866610 012222 999999999 999999997776543
Q ss_pred ----cccccccc-cccCCCCCcchhcccCCCCchhHHHHHHHhhhHhhh-----cCccccCchHHHHHhccCCCHHHHHH
Q psy4079 86 ----SRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDFGSGGWWF-----ESNYCQGTGMIAASLLLLMEEEEAFW 155 (294)
Q Consensus 86 ----~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~i~~~~-----~iGY~QGM~~Iaa~LL~~~~E~~aF~ 155 (294)
.....+|. |+.||||+..+|+.+.|.... ++.++-+| ++||+|||++|+|+|++.|++.+||.
T Consensus 349 a~~re~sv~~i~LDisrTfpsl~iFqk~GPy~d~-------L~~lL~AYt~yRpDvgYVqgmSFIaAvLllnmd~~~AFi 421 (586)
T KOG2223|consen 349 AADREASVELIKLDISRTFPSLSIFQKGGPYHDD-------LHSLLGAYTCYRPDVGYVQGMSFIAAVLLLNMDLADAFI 421 (586)
T ss_pred hhhhhcchhheeechhccCcceeeeccCCchHHH-------HHHHhhhheeecCccccccchHHHHHHHHHcCCcHHHHH
Confidence 11234566 999999999999998654422 23333333 99999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHH
Q psy4079 156 TLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLF 235 (294)
Q Consensus 156 ~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l 235 (294)
+|.+|+++.....||..+.+.+..+...|+..+++.+|+|+.||.+.++.|+.|+.+|+.++|+..+|++.++||||.|+
T Consensus 422 afANLLdkp~q~Aff~~d~s~m~~yf~tfe~~leenlp~L~~Hl~kl~l~PDiylidwiftlyskslpldlacRIwDvy~ 501 (586)
T KOG2223|consen 422 AFANLLDKPCQQAFFRVDHSSMLSYFATFEVFLEENLPKLFTHLKKLELTPDIYLIDWIFTLYSKSLPLDLACRIWDVYC 501 (586)
T ss_pred HHHHHhccHHHHHHHhcCcHHHHHHHHHHHHHHHhccHHHHHHHHhccCCCchhhHHHHHHHHhccCChHHhhhhhheee
Confidence 99999999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhHHHhhCCCC
Q psy4079 236 LDGSMVLFQITLGMLKIKDTIYIVLSS 262 (294)
Q Consensus 236 ~eG~~~l~~ialAiL~~~k~~Ll~~~d 262 (294)
.+|+.++|+.+++||+.+++.|+.++.
T Consensus 502 rdgeeFlfr~~lgIlklyepkLl~mDf 528 (586)
T KOG2223|consen 502 RDGEEFLFRTALGILKLYEPKLLVMDF 528 (586)
T ss_pred ecchHHHHHHHHHHHHHccchHhhhhH
Confidence 999999999999999999999998864
No 3
>smart00164 TBC Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases.
Probab=100.00 E-value=1.5e-34 Score=250.84 Aligned_cols=174 Identities=33% Similarity=0.517 Sum_probs=147.4
Q ss_pred ecCCCCCccc-chHHHHhhhhCCC----cc------------cccccccc-cccCCCCCcchhcccCCCCchhHHHHHHH
Q psy4079 61 VVGCPSKSAG-NWPKQAIVFLNLP----VE------------SRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDF 122 (294)
Q Consensus 61 ~~GIP~~lRg-vW~~L~~~~~~~~----~~------------~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l 122 (294)
.+|||+.+|+ +|+.++|+..... .. .+..++|. |+.||+|++..|+...+. ..+.+++
T Consensus 2 ~~Gip~~~R~~vW~~ll~~~~~~~~~~~~~Y~~l~~~~~~~~~~~~~~I~~Dv~Rt~~~~~~f~~~~~~----~~~~L~~ 77 (199)
T smart00164 2 RKGVPPSLRGVVWKLLLNAQPMDTSADKDLYSRLLKETAPKDKSIVHQIEKDLRRTFPEHSFFQDKEGP----GQESLRR 77 (199)
T ss_pred CCCCCHHHHHHHHHHHhCCchhhhcccchHHHHHHHhhcCCChhhHHHHhcccCCCCCCchhhcCCCcc----cHHHHHH
Confidence 3699999999 9999998854321 10 11235666 999999999999764322 3334444
Q ss_pred hhhHhhh---cCccccCchHHHHHhccCC-CHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHH
Q psy4079 123 GSGGWWF---ESNYCQGTGMIAASLLLLM-EEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELS 198 (294)
Q Consensus 123 ~~i~~~~---~iGY~QGM~~Iaa~LL~~~-~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~h 198 (294)
++.+++. ++|||||||+|||++++++ +|++|||+|.++++++.+ .+|.++.+++...+..++.++++++|+||+|
T Consensus 78 IL~~~~~~~p~~gY~QGm~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~p~l~~~ 156 (199)
T smart00164 78 VLKAYALYNPEVGYCQGMNFLAAPLLLVMPDEEDAFWCLVKLMERYGP-NFYLPDMSGLQLDLLQLDRLVKEYDPDLYKH 156 (199)
T ss_pred HHHHHHHHCCCCceeccHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCc-ccCCCChHHHHHHHHHHHHHHHHHCHHHHHH
Confidence 4445443 9999999999999999999 599999999999999887 6788999999999999999999999999999
Q ss_pred Hhh-CCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCC
Q psy4079 199 LLQ-HDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGS 239 (294)
Q Consensus 199 L~~-~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~ 239 (294)
|++ .|+++..|+.+|++++|++++|++.++||||.++++|.
T Consensus 157 l~~~~~i~~~~~~~~W~~~lF~~~~~~~~~~riwD~~l~eG~ 198 (199)
T smart00164 157 LKDKLGIDPSLYALRWFLTLFARELPLEIVLRIWDVLFAEGS 198 (199)
T ss_pred HHHhcCCCchhHHHHHHHHHHHhhCCHHHHHHHHHHHHhcCC
Confidence 996 99999999999999999999999999999999999985
No 4
>COG5210 GTPase-activating protein [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=270.62 Aligned_cols=205 Identities=30% Similarity=0.529 Sum_probs=177.5
Q ss_pred cCCCCCccc-chHHHHhhhhCCCcc-----------------c-ccccccc-cccCCCCCcchhcccCCCCchhHHHHHH
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLNLPVE-----------------S-RVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALD 121 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~~~~~-----------------~-~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~ 121 (294)
+|||+..|| +|..+.|........ . ....+|. |+.||+|++..|+.....+. ..++
T Consensus 211 ~gip~~~r~~vw~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~Dl~rt~~~~~~f~~~~s~~~----~~L~ 286 (496)
T COG5210 211 KGIPNELRGDVWEFLLGIGFDLDKNPGLYERLLNLHREAKIPTQEIISQIEKDLSRTFPDNSLFQTEISIRA----ENLR 286 (496)
T ss_pred hcCChHhhhhhHHHHhccchhhccCchHHHHHHHHHHhcCCCcHHHHHHHHccccccccccccccCcccccH----HHHH
Confidence 999999999 999998874332211 1 1344555 99999999999987655443 1233
Q ss_pred HhhhHhhh---cCccccCchHHHHHhccCCC-HHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHH
Q psy4079 122 FGSGGWWF---ESNYCQGTGMIAASLLLLME-EEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLEL 197 (294)
Q Consensus 122 l~~i~~~~---~iGY~QGM~~Iaa~LL~~~~-E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~ 197 (294)
+++.+++. ++|||||||+++|+||++++ |++||||+++|++......+|..+++|++..+..+..+++..+|++|+
T Consensus 287 rvL~ays~~~p~vgY~QgMn~l~a~ll~~~~~Ee~AF~~l~~L~~~~~l~~~~~~~~~G~~~~~~~l~~~v~~~~p~l~~ 366 (496)
T COG5210 287 RVLKAYSLYNPEVGYVQGMNFLAAPLLLVLESEEQAFWCLVKLLKNYGLPGYFLKNLSGLHRDLKVLDDLVEELDPELYE 366 (496)
T ss_pred HHHHHHHhcCCCCceeccHHHHHHHHHHHhhhhHHHHHHHHHHHHhccchhhcccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444 99999999999999999998 999999999999966555999999999999999999999999999999
Q ss_pred HHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhh
Q psy4079 198 SLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGT 270 (294)
Q Consensus 198 hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l 270 (294)
|+.+.|+...+|+++||+++|.+.+|++.++||||.+|++|..+++.+++|++...++.++.+++...+...+
T Consensus 367 hl~~~~~~~~~~~~~w~l~lF~~~~p~e~~lriwD~lf~eg~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 439 (496)
T COG5210 367 HLLREGVVLLMFAFRWFLTLFVREFPLEYALRIWDCLFLEGSSMLFQLALAILKLLRDKLLKLDSDELLDLLL 439 (496)
T ss_pred HHHHcCCchhhhhHHHHHHHHHhcCCHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhccCchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998887766554
No 5
>PF00566 RabGAP-TBC: Rab-GTPase-TBC domain; InterPro: IPR000195 Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, imply that these domains are GTPase activator proteins of Rab-like small GTPases [].; GO: 0005097 Rab GTPase activator activity, 0032313 regulation of Rab GTPase activity, 0005622 intracellular; PDB: 2G77_A 1FKM_A 3HZJ_A 3QYE_A 2QFZ_A 3QYB_A 2QQ8_A 3DZX_A 3QWL_A.
Probab=99.97 E-value=1.9e-31 Score=232.81 Aligned_cols=184 Identities=27% Similarity=0.497 Sum_probs=149.0
Q ss_pred Cccc-chHHHHhhhh----------------------CCCcccccccccc-cccCCCCCcchhcccCCCCchhHHHHHHH
Q psy4079 67 KSAG-NWPKQAIVFL----------------------NLPVESRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDF 122 (294)
Q Consensus 67 ~lRg-vW~~L~~~~~----------------------~~~~~~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l 122 (294)
.+|+ +|+.++|... ......+..++|+ |+.||++++..+.. ......++.
T Consensus 2 ~~R~~vW~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~Dv~rt~~~~~~~~~------~~~~~~l~~ 75 (214)
T PF00566_consen 2 SLRGQVWKILLGIEPNYSNNYQDEKNQWEQIESKSSNSNKLDNKIFEQIDKDVNRTFPNSFLFKN------EQNQKSLER 75 (214)
T ss_dssp CCHHHHHHHHCTCSCHHHHHHHHHHHHHHHHHHHHHHCTSTCHTCHHHHHHHHCTSSTSCCCSTT------HHHHHHHHH
T ss_pred ChHHHHHHHHHccchhhhhhHHHHhhhhhhhhHHHHHhccccchHHHHHHHhhhhhcccchhhhh------cchHHHHHH
Confidence 5799 9999987731 1111234456666 99999994422222 344444544
Q ss_pred hhhHhhh---cCccccCchHHHHHhc-cCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHH
Q psy4079 123 GSGGWWF---ESNYCQGTGMIAASLL-LLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELS 198 (294)
Q Consensus 123 ~~i~~~~---~iGY~QGM~~Iaa~LL-~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~h 198 (294)
++.+++. ++||+|||++|+++++ ...+|++|||++.++++...+ .+|.++.++++..+..++.++++++|++++|
T Consensus 76 iL~~~~~~~~~~~Y~qG~~~i~~~ll~~~~~e~~af~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~~P~l~~~ 154 (214)
T PF00566_consen 76 ILSAYAKYNPDVGYCQGMNDIAAPLLLVFLDEEEAFWCFVQLLNYYLP-DFFQPNFKGLQKILKIFEQLLKKHDPELYNH 154 (214)
T ss_dssp HHHHHHHHTTTTSS-TTHHHHHHHHHHTCSHHHHHHHHHHHHHTHHGG-GGTSTTHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHhccccccccccchhhhhhhhhhhhcccccchhccccchhccccc-ccccccccccchhhhhHHHHHHhhhhhhhhh
Confidence 4444443 8999999999999999 567999999999999944444 8999999999999999999999999999999
Q ss_pred HhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChH-HHHHHHHHHHHhHHHhh
Q psy4079 199 LLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMV-LFQITLGMLKIKDTIYI 258 (294)
Q Consensus 199 L~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~-l~~ialAiL~~~k~~Ll 258 (294)
|++.|+++..|+.+|+.++|++.+|.+.+.|+|| ++.+|.++ ++++++|+++..|++||
T Consensus 155 l~~~~~~~~~~~~~w~~~lF~~~l~~~~~~~lwD-~l~~g~~~~l~~~~lail~~~~~~il 214 (214)
T PF00566_consen 155 LKQLGVDPEIYAFPWFLTLFSRSLPFDDVLRLWD-FLLEGYKFFLFFIALAILKYLRDQIL 214 (214)
T ss_dssp HHHTT-GGHHHHHHHHHTTTTTTS-HHHHHHHHH-HHHHCTTHHHHHHHHHHHHHTHHHHH
T ss_pred hhhhhhhhhhhhhhhhHhhcCCcCCHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 77799987 99999999999999986
No 6
>KOG2222|consensus
Probab=99.96 E-value=1.1e-29 Score=237.71 Aligned_cols=212 Identities=38% Similarity=0.625 Sum_probs=187.1
Q ss_pred cCCCCCccc-chHHHHhhhhCCCcc---------------cccccccc-cccCCCCCcchhcccCCCCchhHHHHHHHhh
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLNLPVE---------------SRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDFGS 124 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~~~~~---------------~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~ 124 (294)
-|||..+|. .|+.|.|...+.+.. ..+-.||. |+-|+.|++..|....+.+-..++. .++.
T Consensus 169 ggiphslr~~lw~rlsga~~kkk~ae~sy~~ilk~~andk~~~~~qiekdllr~lpnn~cf~k~n~~gi~~lrr--ilk~ 246 (848)
T KOG2222|consen 169 GGIPHSLRAFLWMRLSGALAKKKDAETSYEDILKACANDKLMIGKQIEKDLLRILPNNACFSKKNGEGIEALRR--ILKC 246 (848)
T ss_pred CCCCcchhHHHHHHhhhhhhhhccccccHHHHHHHhcccccchhHHHHHHHHHhCCCcceeeCCCCcchHHHHH--HHhh
Confidence 579999999 999999884333221 12234565 9999999999998776554443332 2567
Q ss_pred hHhhh-cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCC
Q psy4079 125 GGWWF-ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHD 203 (294)
Q Consensus 125 i~~~~-~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~ 203 (294)
++|.| ++||||||.-|+|.||+++.||.|||++..+++..+|.+||+...-|++....+..++++-+.|.+-+.|++++
T Consensus 247 ia~ifpdigycqg~gviva~lllf~~ee~afwmmaaiiedilp~nfysqtllgiqaderv~~~li~~~l~~ldeal~~~d 326 (848)
T KOG2222|consen 247 IAFIFPDIGYCQGMGVIVACLLLFCEEENAFWMMAAIIEDILPANFYSQTLLGIQADERVMHHLIACHLPDLDEALEDHD 326 (848)
T ss_pred heeecCCcccccCccHHHHHHHHHhcchhHHHHHHHHHHHhcCchhhhhhHhccchhHHHHHHHHHhccCchhHHHHhcc
Confidence 78888 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCC----CCHHHHHhhhccccc
Q psy4079 204 IELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVL----SSPIAITMGTCVYQL 275 (294)
Q Consensus 204 i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~----~d~~~il~~l~~~~~ 275 (294)
++.++.+..||+|+|.+.+.....+||||.||++|.-.+|++.++||+.-+++|... +++.+|++.+...|.
T Consensus 327 ielslitl~w~ltlf~nv~~~killriwd~~fy~g~i~ifql~i~ilkmkeqdi~~iaettensa~if~als~ip~ 402 (848)
T KOG2222|consen 327 IELSLITLHWFLTLFANVFHMKILLRIWDFFFYEGGINIFQLIIGILKMKEQDIKEIAETTENSADIFNALSDIPA 402 (848)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHhheecCcchhHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999999999999999999888 889999999865443
No 7
>KOG4567|consensus
Probab=99.95 E-value=7e-28 Score=215.88 Aligned_cols=190 Identities=16% Similarity=0.192 Sum_probs=150.0
Q ss_pred cccccc-cccCCCCCcchhcccCCCC--------------chhHHHH-----HHHhhhHhhh-----cCccccCchHHHH
Q psy4079 88 VVGCPS-KSAGNWPKQAIVFLNLPVD--------------SGVVVNA-----LDFGSGGWWF-----ESNYCQGTGMIAA 142 (294)
Q Consensus 88 ~~~~i~-dv~Rtfp~~~~f~~~~~~~--------------~~~~~~~-----l~l~~i~~~~-----~iGY~QGM~~Iaa 142 (294)
+..||+ |+.||.|+-.+|....... +..+.|. .-..+|++.| .|||+||||.|+|
T Consensus 120 ~l~QIdrDvrr~~pdi~ff~~~~~~p~~~~~~~~~~i~~~q~~~~n~~gl~~~~~erilfiyAKLNpGi~YVQGMNEIla 199 (370)
T KOG4567|consen 120 VLLQIDRDVRRTHPDISFFQLASSYPCRQGMDSRRRINASQEAGRNRLGLTRFAAERILFIYAKLNPGIGYVQGMNEILA 199 (370)
T ss_pred HHHHHHHHHHHhCcchHhhhhccccccccchhhHhhhhhhhHhhhcccchhhhHHHHHHHHHhhcCCcchHHhhhHHHhh
Confidence 445775 8999999988885543211 1111110 0012344444 9999999999999
Q ss_pred HhccCC-----------CHHHHHHHHHHHHhccCCCCCC----CCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchh
Q psy4079 143 SLLLLM-----------EEEEAFWTLSAIVEDLLPASYY----TPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELS 207 (294)
Q Consensus 143 ~LL~~~-----------~E~~aF~~~~~l~~~~~~~~~f----~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~ 207 (294)
|+++++ -|+|||.||.+||.... ++| .++..|++..+..+..+++++|-+||+||++.++.|+
T Consensus 200 PiYYVfa~Dpd~e~~~~aEaDaFFCF~~LMseir--Dnf~k~LDdS~~GI~~~Msr~~~~lk~~D~EL~~~L~~~~i~Pq 277 (370)
T KOG4567|consen 200 PIYYVFANDPDEENRAYAEADAFFCFTQLMSEIR--DNFIKTLDDSVGGIHFLMSRLSELLKKHDEELWRHLEEKEIHPQ 277 (370)
T ss_pred hhheeeccCCchhhHHhhhhhHHHHHHHHHHHHH--HHHHHhccccccchHHHHHHHHHHHHHhhHHHHHHHHhcCCCcc
Confidence 999987 28899999999998754 334 3557789999999999999999999999999999999
Q ss_pred HhHHHHHHHHhccCCCHHHHHHHHHHHHHc--CChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhccccchhhhh
Q psy4079 208 LITLHWFLTLFASVVHFKILLRIWDLLFLD--GSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVYQLRGLVY 280 (294)
Q Consensus 208 ~~~~~WfltlF~~~~p~~~vlriWD~~l~e--G~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~~~~~~~~ 280 (294)
+|+++|++.+++++||+++++||||.++++ +..++..+..|++...|+.|++-+. ..-+..||.++-.++..
T Consensus 278 fyaFRWitLLLsQEF~lpDvi~lWDsl~sD~~rfd~Ll~iCcsmlil~Re~il~~DF-~~nmkLLQ~yp~tdi~~ 351 (370)
T KOG4567|consen 278 FYAFRWITLLLSQEFPLPDVIRLWDSLLSDPQRFDFLLYICCSMLILVRERILEGDF-TVNMKLLQNYPTTDISK 351 (370)
T ss_pred chhHHHHHHHHhccCCchhHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHhcch-HHHHHHHhcCCCCCHHH
Confidence 999999999999999999999999999987 4578999999999999999998654 44456666666655543
No 8
>KOG1092|consensus
Probab=99.95 E-value=3e-27 Score=218.96 Aligned_cols=205 Identities=19% Similarity=0.235 Sum_probs=172.3
Q ss_pred ecCCCCCccc-chHHHHhhhh-C----------------------------CCcccccccccc-cccCCCCCcchhcccC
Q psy4079 61 VVGCPSKSAG-NWPKQAIVFL-N----------------------------LPVESRVVGCPS-KSAGNWPKQAIVFLNL 109 (294)
Q Consensus 61 ~~GIP~~lRg-vW~~L~~~~~-~----------------------------~~~~~~~~~~i~-dv~Rtfp~~~~f~~~~ 109 (294)
+.|||.+.|+ +|+.+.|..- + -+.......||. |+.|+-|.-..|..
T Consensus 186 w~Gvp~~~Rp~~Wkll~gylp~n~~rr~~~l~~Kr~eY~~~v~~~~~~~~~~~~~~d~~rQI~id~prm~p~~~l~q~-- 263 (484)
T KOG1092|consen 186 WNGVPSKMRPIVWKLLSGYLPPNSDRREGTLQRKRKEYVDSVVQYFDSLTNGDEDQDTWRQIPIDIPRMNPHIPLFQQ-- 263 (484)
T ss_pred cCCCCccccCccceeeecccCcchhhhhhhHHHHHHHHHHHHHHHhccCCCccccCccccccccCCCCCCccccchhh--
Confidence 3899999999 9998876610 0 011234456675 89999988777765
Q ss_pred CCCchhHHHHHHHhhhHhhh---cCccccCchHHHHHhccCC--------------------------CHHHHHHHHHHH
Q psy4079 110 PVDSGVVVNALDFGSGGWWF---ESNYCQGTGMIAASLLLLM--------------------------EEEEAFWTLSAI 160 (294)
Q Consensus 110 ~~~~~~~~~~l~l~~i~~~~---~iGY~QGM~~Iaa~LL~~~--------------------------~E~~aF~~~~~l 160 (294)
...++.+.+++..|+. ..||+||.|+++.+++.++ -|+|||||+.+|
T Consensus 264 ----~~vq~~lerIl~iwairhpAsGyvqgindlvtpf~vvfl~e~l~~~~~~~~~d~~~l~~E~~~~iEADsyWClskL 339 (484)
T KOG1092|consen 264 ----KIVQEMLERILYIWAIRHPASGYVQGINDLVTPFFVVFLSEYLGPIMDVESIDMSLLPAENAEDIEADAYWCLSKL 339 (484)
T ss_pred ----HHHHHHHHHHHHHHHHhcccccccccceeeechhhhhhhHhhcCccccccccchhhccHHHHhhhhhhHHHHHHHH
Confidence 4556666677777776 9999999999999988543 178999999999
Q ss_pred HhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCC-
Q psy4079 161 VEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGS- 239 (294)
Q Consensus 161 ~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~- 239 (294)
++.+. +-|....||++.....++++++..|+.+++||+++|++...|+++|+.+|+.+++|+..++|+||.|++|++
T Consensus 340 LD~IQ--DNYtfaQpGIq~kV~~L~eLv~RID~~~hkHlq~~gveylQFAFRWmNcLLmRE~pl~~~iRlWDTY~aE~dg 417 (484)
T KOG1092|consen 340 LDGIQ--DNYTFAQPGIQRKVKNLKELVQRIDEPLHKHLQEHGVEYLQFAFRWMNCLLMREFPLRCTIRLWDTYLAEPDG 417 (484)
T ss_pred HHHhh--hhhhhcChhHHHHHHHHHHHHHHhcHHHHHHHHHhchHHHHHHHHHHHHHHHhhccchhHHHHHHHhhcCccc
Confidence 99887 458888999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred --hHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhcccc
Q psy4079 240 --MVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVYQ 274 (294)
Q Consensus 240 --~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~~ 274 (294)
.++.++++|.|...+++|+ ..|..+++..|++.+
T Consensus 418 f~~FhvYvcAAFL~kW~~eL~-e~DFQ~~ilfLQnlP 453 (484)
T KOG1092|consen 418 FNEFHVYVCAAFLLKWSSELM-ENDFQELILFLQNLP 453 (484)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHhcCC
Confidence 7899999999999999999 666777776666544
No 9
>KOG4436|consensus
Probab=99.94 E-value=8.8e-27 Score=228.78 Aligned_cols=209 Identities=27% Similarity=0.378 Sum_probs=183.7
Q ss_pred eee-cCCCCCccc-chHHHHhhhhC---CCcc------------c---ccccccc-cccCCCCCcchhcccCCCCchhHH
Q psy4079 59 SRV-VGCPSKSAG-NWPKQAIVFLN---LPVE------------S---RVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVV 117 (294)
Q Consensus 59 sr~-~GIP~~lRg-vW~~L~~~~~~---~~~~------------~---~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~ 117 (294)
+.+ .|+|..-|| +|..++..+.- ++.+ . .....|. |..||||.|..|....+.++...+
T Consensus 572 ~~l~~gvprsrrgeiwtflA~q~~~~~~l~~~kr~~~~p~~~llkqLte~qhAi~idlgrtfp~h~~~~~qlg~gqlsl~ 651 (948)
T KOG4436|consen 572 SALRTGVPRSRRGEIWTFLAEQHSLNHALPDKKRPPDFPYKELLKQLTEQQHAILIDLGRTFPTHPYFSDQLGLGQLSLF 651 (948)
T ss_pred HHHHccCchhhhHHHHHHHHHHHHHhccCCcccCCCCCChHHHHHHHHHHHHHHHHhhccccCCCHHHHhhccccHHHHH
Confidence 344 999999999 99999876321 1111 1 1122233 999999999999998888888877
Q ss_pred HHHHHhhhHhhh---cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChH
Q psy4079 118 NALDFGSGGWWF---ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQ 194 (294)
Q Consensus 118 ~~l~l~~i~~~~---~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~ 194 (294)
|.|+ +|+. ++|||||.+++||+||++++|++||-++..||.....+.=|.+++..++..+..+..+++.+.|+
T Consensus 652 n~Lk----ayslld~e~gycqg~~fv~gvlllh~~e~~afellk~LM~~r~~r~qy~pdm~~lq~qmyqLsrl~hd~hrd 727 (948)
T KOG4436|consen 652 NLLK----AYSLLDPEVGYCQGLSFVAGVLLLHMSEENAFELLKFLMFDRGMRKQYRPDMKKLQIQMYQLSRLLHDYHRD 727 (948)
T ss_pred HHHH----HhcccCccccccCcchhhhhhhHhhcchhhHHHHHHHHHHHHhhHhhhchHHHHHHHHHHHHHHHHHHHhHH
Confidence 7655 3332 99999999999999999999999999999999988887889999999999999999999999999
Q ss_pred HHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhc
Q psy4079 195 LELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTC 271 (294)
Q Consensus 195 L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~ 271 (294)
||+|++++.|.|+.|+.+||+|.|+.+||+..+.|++|.++..|..+++.+++++|..++..|++.++.++|...++
T Consensus 728 lyn~le~~ei~pslyAapw~lt~fasQf~lGfvarvfd~~flq~tevifK~a~~llsv~k~~l~e~dn~e~i~d~~k 804 (948)
T KOG4436|consen 728 LYNHLEENEISPSLYAAPWFLTVFASQFPLGFVARVFDLIFLQGTEVIFKVALSLLSVHKQLLLEKDNFEEIVDFLK 804 (948)
T ss_pred HHHHHHhcccChHHhhhHHHHHHHHhhCcchHHHHHHHHHHhhccchhhhhHHHHHHhhHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987764
No 10
>KOG1093|consensus
Probab=99.94 E-value=8.4e-27 Score=222.55 Aligned_cols=220 Identities=19% Similarity=0.175 Sum_probs=181.5
Q ss_pred cCCCCCccc-chHHHHhhhhCCCcc---------cccccccc-cccCCCCCcchhcccCCCCchhHHHHHHHhhhHhhh-
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLNLPVE---------SRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDFGSGGWWF- 129 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~~~~~---------~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~i~~~~- 129 (294)
.|+||..|| +|..|++...+.... .....++. |+.|..... +...+..++..+++.+-+|+.
T Consensus 354 vdvpp~~R~~iW~aLL~l~e~~~a~y~~IDk~Ts~~tdrqievdiprchQyd------~~lsSp~~~r~lrRvLkawv~~ 427 (725)
T KOG1093|consen 354 VDVPPLYRGFIWAALLQLEENHTAFYTLIDKGTSHSTDRQIEVDIPRCHQYD------ELLSSPKGHRKLRRVLKAWVTW 427 (725)
T ss_pred cCCChhHhHHHHHHHhcCccccchhhhhhhcCCCCcchhhhhcccchhhhcc------cccCCHHHHHHHHHHHHHHHhc
Confidence 799999999 999999774333322 12334444 666654433 344556777778888888877
Q ss_pred --cCccccCchHHHHHhccCC--CHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcc
Q psy4079 130 --ESNYCQGTGMIAASLLLLM--EEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIE 205 (294)
Q Consensus 130 --~iGY~QGM~~Iaa~LL~~~--~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~ 205 (294)
...|+||+..+|+||++.. +|+-||.|+..++-++..+.|..++..-++.++..|.+++..++|+|++||.++|+.
T Consensus 428 s~~fvywqgldsLa~PFl~ln~Nne~laF~~~~~fi~kycq~fflkdns~vikeyLs~f~~l~AfhDpeL~qHl~~~~f~ 507 (725)
T KOG1093|consen 428 SPIFVYWQGLDSLAAPFLYLNFNNELLAFACIATFIPKYCQHFFLKDNSNVIKEYLSMFSQLLAFHDPELLQHLIDIGFI 507 (725)
T ss_pred CcceeecCCChhhhhhHHHHhcCchHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHhcCHHHHHHHHHcCCc
Confidence 8999999999999999654 799999999999999988555556788899999999999999999999999999999
Q ss_pred hhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHH--hhhccccchhhhhhhc
Q psy4079 206 LSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAIT--MGTCVYQLRGLVYMET 283 (294)
Q Consensus 206 ~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il--~~l~~~~~~~~~~~~~ 283 (294)
+++|+.+||+|+|++++|++..+.+||.++..+..+.+.+++|++...|+.|+.+.--+.++ .-+...+++..++...
T Consensus 508 ~eLyAiPwflT~Fshvlpl~kil~LwD~lml~~~SFplmi~vAil~~lR~~LLa~nfne~illf~d~pdldId~~Ires~ 587 (725)
T KOG1093|consen 508 PELYAIPWFLTMFSHVLPLHKILHLWDNLMLGHSSFPLMIGVAILIQLRDPLLACNFNECILLFSDLPDLDIDVCIRESY 587 (725)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHhcCCCccHHHHHHHHHHHhhhhhhhCCchhheeeeccCCcccHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999996555543 4455667777777776
Q ss_pred CCCC
Q psy4079 284 NMFP 287 (294)
Q Consensus 284 ~~~~ 287 (294)
+++.
T Consensus 588 ~l~e 591 (725)
T KOG1093|consen 588 HLME 591 (725)
T ss_pred hhhh
Confidence 6654
No 11
>KOG4347|consensus
Probab=99.94 E-value=2e-26 Score=223.00 Aligned_cols=212 Identities=29% Similarity=0.465 Sum_probs=182.1
Q ss_pred cCCCCCccc-chHHHHhhhhC---CC------------cccccccccc-cccCCCCCcchhcccCCCCchhHHHHHHHhh
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLN---LP------------VESRVVGCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDFGS 124 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~---~~------------~~~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~ 124 (294)
.|||.+.|| .|-...|.-.. .+ ..+-..+.|. |..|..|+|+-|+.+ .+.+.+++++
T Consensus 201 ~gipe~~rgeiW~l~sGav~~~l~~~Geygkll~~~~G~~~~a~eEIE~Dl~rsLpEhpA~Q~e------~gi~aLR~vL 274 (671)
T KOG4347|consen 201 NGFPEDPRGEIWYLASGAVASLLLNPGEYGKLLHSVTGKRSVATEEIEPDLGRSLPEHPAFQSE------PGIAALRRVL 274 (671)
T ss_pred HhcCCChHHHHHHhhhHHHHHhhcCcHHhhhhhhcccCCcccccccccCCCCCCCCcchhhhCC------CchhhHHHHH
Confidence 899999999 99888766111 00 0123334454 999999999999874 3455555555
Q ss_pred hHhhh---cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhh
Q psy4079 125 GGWWF---ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQ 201 (294)
Q Consensus 125 i~~~~---~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~ 201 (294)
.+++. +|||||-||-+++.++++..||+|||+++.+.+++.+ +||+...-|....+.+|+.+++.++|.+++|+..
T Consensus 275 ~Aya~~Np~vGYcQaMNIV~s~lll~~~EEeafwll~~lce~~ip-~yys~~vvGtliDQ~vfe~lve~~lP~l~~~~~~ 353 (671)
T KOG4347|consen 275 TAYAWSNPEVGYCQAMNIVGSELLLFCKEEEAFWLLSKLCEIYIP-DYYSKTVVGTLIDQSVFEELVEDTLPVLGEHLAV 353 (671)
T ss_pred HhhhccCCchhHHHHHHHHHHhhhhhhccchHHHHHHHHHHHhcc-cccchhhhhhHHHHHHHHHHHHHhhhHHHHHhhh
Confidence 55555 9999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhccccchhhhhh
Q psy4079 202 HDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVYQLRGLVYM 281 (294)
Q Consensus 202 ~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~~~~~~~~~ 281 (294)
+| .......+||+|+|...+|++..+||.|.|+.+|.+++|.+|+||++.+.++|++++|..+++.-+..| ++.+...
T Consensus 354 l~-~l~~Vsl~WFlslFls~m~le~a~~ilD~FF~eG~rvlFqiaLail~~N~~~il~~~dDge~~~vl~~y-~~~i~~~ 431 (671)
T KOG4347|consen 354 LG-QLSTVSLSWFLSLFLSLMPLEYAVRILDCFFYEGPRVLFQIALAILKQNAERILSATDDGEAMMVLGNY-FDSIYNG 431 (671)
T ss_pred hc-ccceEeeHHHHHHHHHHcchHHHHHHHhhhhhcccHHHHHHHHHHHHhhHHHhcccCCchHHHHHHHHH-HHhccCC
Confidence 99 688999999999999999999999999999999999999999999999999999999998888777554 4444444
Q ss_pred h
Q psy4079 282 E 282 (294)
Q Consensus 282 ~ 282 (294)
+
T Consensus 432 ~ 432 (671)
T KOG4347|consen 432 D 432 (671)
T ss_pred C
Confidence 3
No 12
>KOG1102|consensus
Probab=99.90 E-value=1.9e-24 Score=206.18 Aligned_cols=206 Identities=30% Similarity=0.469 Sum_probs=177.8
Q ss_pred cCCCCCccc-chHHHHhhhhCC-------------Ccc-cccccccccccCCCCCcchhcccCCCCchhHHHHHHHhhhH
Q psy4079 62 VGCPSKSAG-NWPKQAIVFLNL-------------PVE-SRVVGCPSKSAGNWPKQAIVFLNLPVDSGVVVNALDFGSGG 126 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~~~-------------~~~-~~~~~~i~dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~i~ 126 (294)
+|||..+|+ +|+.+.+..... ... ..-.+++.|+.||||.|..|......++....+.++ +
T Consensus 144 ~gip~~~r~~~W~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~Rt~~~~~~f~~~~~~~q~sl~~vl~----a 219 (397)
T KOG1102|consen 144 VGIPDELRGLVWQLLLYAVEESLFDSLDELYRLQLDEPEPHESEIIRDLSRTFPAHLLFRKRYGVGQRSLYNVLK----A 219 (397)
T ss_pred ccccHHHHHHHHHHhcccHhhhhhhhHHHHHHHhhccCCCchhHHHhhccCcCcchhhhhhhcCcccccccccch----h
Confidence 999999999 999987751111 111 111122349999999999998877777777665544 2
Q ss_pred hh-h--cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCC
Q psy4079 127 WW-F--ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHD 203 (294)
Q Consensus 127 ~~-~--~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~ 203 (294)
++ | ++||||||..+||+++.+++|++||++++.+|..+.. +.|..+.++++.....++.+++...|+++.|+.+.+
T Consensus 220 ~s~~~~~~gy~q~m~~~a~~ll~~~~ee~af~~lv~l~~~~~~-~~~~~~~~~l~~~~~~~~~l~~~~~p~~~~~~~~~~ 298 (397)
T KOG1102|consen 220 YSLYDPEVGYCQGMSSIAAPLLLYLPEEEAFPLLVKLMKNYGL-DLLSPGFSGLQRSFRQLQRLLKELIPKLLDHLLPQG 298 (397)
T ss_pred hcccCCCcccccchhhHhhhhhccCchhhhhhhhhhhhhccch-hcccccCCchhhhHHHHHHHHHHhChhhhhhccccc
Confidence 22 3 9999999999999999999999999999999998874 666999999999999999999999999999999999
Q ss_pred cchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhccc
Q psy4079 204 IELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVY 273 (294)
Q Consensus 204 i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~ 273 (294)
++..+|+.+|++|+|+..+|++.+.|+||.++.+|..+++.+++++++...+.+++.+ .+.+++++.+.
T Consensus 299 ~~~~~~~s~w~~t~f~~k~p~~~~~ri~d~~~~~g~~i~~~~~~~l~~~~~~~~~~~~-~e~~~~~l~~~ 367 (397)
T KOG1102|consen 299 IELSMYASQWFLTLFAAKFPLELVLRIWDALFVEGVSILFRFSLALLKHKADDLLDLD-FESLLSYLRVD 367 (397)
T ss_pred cccceeccceeeEeeeccccHHHHHHHhHHHHHhchHHHHHHHHHHhhhhhHHHhhcc-HHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999988 88888887554
No 13
>KOG2221|consensus
Probab=99.81 E-value=1.4e-20 Score=161.52 Aligned_cols=168 Identities=23% Similarity=0.374 Sum_probs=137.5
Q ss_pred cccCCcchhhhhcCCCcceee-cCCCCCccc-chHHHHhhhhCCCc-------------ccccccccc-cccCCCCCcch
Q psy4079 41 CAGNWPKQAIVFLNLPVESRV-VGCPSKSAG-NWPKQAIVFLNLPV-------------ESRVVGCPS-KSAGNWPKQAI 104 (294)
Q Consensus 41 ~~~~w~~~~~~~~~~~~~sr~-~GIP~~lRg-vW~~L~~~~~~~~~-------------~~~~~~~i~-dv~Rtfp~~~~ 104 (294)
+++||-+..- .+-.++..|- +||||.+|| .|..|.|.....+. ..+..+.|. |..|.||.|.+
T Consensus 81 mldnw~~~m~-kk~~~ir~rcrkgippslr~Raw~ylsGa~~~~~~np~~~~~~~~~pG~p~t~e~i~kdl~rqfp~hem 159 (267)
T KOG2221|consen 81 MLDNWHEEMR-KKQKKIRPRCRKGIPPSLRGRAWRYLSGAPSPPPKNPVVFDELGPAPGDPKTAEGIHKDLHRQFPFHEM 159 (267)
T ss_pred HHHHHHHHHH-hccccccchhhcCCCcccchhHHHhhcCCCCCCCCCcchhhhccCCCCCCcchhhhccccccCCCcccc
Confidence 3467766443 1223344444 999999999 99999988544432 244455565 99999999999
Q ss_pred hcccCCCCchhHHHHHHHhhhHhhh---cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhH
Q psy4079 105 VFLNLPVDSGVVVNALDFGSGGWWF---ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQ 181 (294)
Q Consensus 105 f~~~~~~~~~~~~~~l~l~~i~~~~---~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~ 181 (294)
|......++....++++ +|.. +.||||+=.-|+|.+|+++++++|||||+++.+++.. +||.++...++..-
T Consensus 160 f~s~~k~gkqelfr~lk----a~ti~~pe~g~cq~qapiaa~llmhmp~rdaf~~~vqicekylq-gy~~sgleaiq~dg 234 (267)
T KOG2221|consen 160 FGSSGKTGKQELFRVLK----AYTIYKPEEGYCQAQAPIAAVLLMHMPARDAFWCFVQICEKYLQ-GYYSSGLEAIQNDG 234 (267)
T ss_pred cccccccchHHHHHHHH----HHHHhCchhhhhhhhchHHHHHHhcccHHHHHHHHHHHHHHHcc-cccccchhhhhccc
Confidence 98765555555554443 4433 9999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhChHHHHHHhhCCcchhHhHHHHH
Q psy4079 182 KVLRSLVASGLPQLELSLLQHDIELSLITLHWF 214 (294)
Q Consensus 182 ~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~Wf 214 (294)
.++..|+++.+|-.|.|+...++++.+|...||
T Consensus 235 ~il~~Llkk~~~p~~rH~~~~kvdp~lym~ewF 267 (267)
T KOG2221|consen 235 GILEGLLKKASPPPYRHLGGDKVDPLLYMTEWF 267 (267)
T ss_pred HHHHHHHHhcCCCCCcccccCCCCHHHhhhccC
Confidence 999999999999999999999999999999997
No 14
>KOG2224|consensus
Probab=99.78 E-value=7e-19 Score=163.80 Aligned_cols=196 Identities=18% Similarity=0.259 Sum_probs=141.4
Q ss_pred cCCCCCccc-chHHHHhhhh------------CCCcc----------------------cccccccc-cccCCCCCcchh
Q psy4079 62 VGCPSKSAG-NWPKQAIVFL------------NLPVE----------------------SRVVGCPS-KSAGNWPKQAIV 105 (294)
Q Consensus 62 ~GIP~~lRg-vW~~L~~~~~------------~~~~~----------------------~~~~~~i~-dv~Rtfp~~~~f 105 (294)
-||-..+|| ||+.|+..+- +.++. ..+.-..+ |+.||..++.+|
T Consensus 434 ggid~sir~evwpfllk~ys~est~edr~al~~~krkey~eiqqkrlysmspeeh~~fwknvq~tvdkdvvrtdrnn~ff 513 (781)
T KOG2224|consen 434 GGIDKSIRGEVWPFLLKCYSFESTFEDRAALMDIKRKEYEEIQQKRLYSMSPEEHIAFWKNVQFTVDKDVVRTDRNNPFF 513 (781)
T ss_pred ccchhhhhcchhHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHhheEEEEecceeeccCCCCcc
Confidence 899999999 9999975521 11110 11112223 999999999999
Q ss_pred cccCCCCchhHHHHHHHhhhHhhh--cCccccCchHHHHHhccCC-CHHHHHHHHHHHHhccC-----------------
Q psy4079 106 FLNLPVDSGVVVNALDFGSGGWWF--ESNYCQGTGMIAASLLLLM-EEEEAFWTLSAIVEDLL----------------- 165 (294)
Q Consensus 106 ~~~~~~~~~~~~~~l~l~~i~~~~--~iGY~QGM~~Iaa~LL~~~-~E~~aF~~~~~l~~~~~----------------- 165 (294)
.-+...+.+...+.+ .+++ .| .+||.|||+++.|+.|.-. +|.++||||+.+|..+.
T Consensus 514 ~gddnpn~e~mk~il--ln~a-vyn~~m~ysqgmsdllapvlcevqnesetfwcfvglmqgmsdlvapilaevldesdtf 590 (781)
T KOG2224|consen 514 CGDDNPNTESMKNIL--LNFA-VYNPAMGYSQGMSDLLAPVLCEVQNESETFWCFVGLMQGMSDLVAPILAEVLDESDTF 590 (781)
T ss_pred cCCCCCcHHHHHHHH--Hhhe-eecccccccccchhhcchhhhhhccccchhhhhhhhhccchhhhhhHHHhhhccccch
Confidence 776666655544322 1222 34 9999988888777776443 55555555555554210
Q ss_pred -------CCCCC--CCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcch--hHhHHHHHHHHhccCCCHHHHHHHHHHH
Q psy4079 166 -------PASYY--TPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIEL--SLITLHWFLTLFASVVHFKILLRIWDLL 234 (294)
Q Consensus 166 -------~~~~f--~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~--~~~~~~WfltlF~~~~p~~~vlriWD~~ 234 (294)
...+| ++....+...+..++++++...|..|+||.++|-+. .+|+.+|++.+|.++||-..++|||+..
T Consensus 591 wcfvglmqna~fv~sp~d~dmd~~l~ylreliri~~~~fykhl~q~~ed~lellfchrwlllcfkref~ea~airiweac 670 (781)
T KOG2224|consen 591 WCFVGLMQNAFFVCSPRDEDMDHNLLYLRELIRIMHPHFYKHLEQHGEDGLELLFCHRWLLLCFKREFPEAEAIRIWEAC 670 (781)
T ss_pred hhhhhhhcceEEEeCCcchhhhHhHHHHHHHHHHhhHHHHHHHHHhCcchhhHHHHHHHHHHHhhhcccHHHHHHHHHHH
Confidence 00122 455666777788899999999999999999988654 4789999999999999999999999999
Q ss_pred HHc--CChHHHHHHHHHHHHhHHHhhCC
Q psy4079 235 FLD--GSMVLFQITLGMLKIKDTIYIVL 260 (294)
Q Consensus 235 l~e--G~~~l~~ialAiL~~~k~~Ll~~ 260 (294)
++. .+.+.+++.+||+..+.++.+..
T Consensus 671 wa~y~tdyfhlficlaiiaiy~ddvi~q 698 (781)
T KOG2224|consen 671 WAHYLTDYFHLFICLAIIAIYADDVIAQ 698 (781)
T ss_pred HHHhhHHHHHHHHHHHHHHHhhhHHHHh
Confidence 965 56889999999999999988765
No 15
>KOG2595|consensus
Probab=99.76 E-value=1.4e-18 Score=157.76 Aligned_cols=197 Identities=16% Similarity=0.234 Sum_probs=156.8
Q ss_pred CCccc-chHHHHhhhhCCCcc---------cccccccc-cccCCCCCcchhcccCCCCch-hHHHHHH--HhhhHhhh-c
Q psy4079 66 SKSAG-NWPKQAIVFLNLPVE---------SRVVGCPS-KSAGNWPKQAIVFLNLPVDSG-VVVNALD--FGSGGWWF-E 130 (294)
Q Consensus 66 ~~lRg-vW~~L~~~~~~~~~~---------~~~~~~i~-dv~Rtfp~~~~f~~~~~~~~~-~~~~~l~--l~~i~~~~-~ 130 (294)
+.+|. +|+.|.+...+..+. .+-..|.. |+.|++.. |..+.+..++ ..+..+. +.+++-.| +
T Consensus 64 dslRk~vWp~L~~~~~n~~~~~~~~~~~q~hkd~nQV~LDv~RSl~r---fppg~p~~~R~~Lq~qL~~LI~rVl~~yP~ 140 (395)
T KOG2595|consen 64 DSLRKDVWPELLALNINHLDATSTLTPVQKHKDYNQVILDVERSLGR---FPPGIPKELRLQLQKQLTELILRVLRKYPT 140 (395)
T ss_pred HHHHHHHHHHHhccccCCCcccccCChhhhCcccceEEEehhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46788 999999986655442 22223333 88888754 2223333333 2222221 33444456 9
Q ss_pred CccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhHhH
Q psy4079 131 SNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSLIT 210 (294)
Q Consensus 131 iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~ 210 (294)
..|.||.++||..+|++++|.+|+-++.++-..++. +|..+++.+..+.+..+..+++..+|++|+.+++..+ ..+|+
T Consensus 141 L~YYQGyHDI~~tfLLv~gE~~Al~l~E~L~~~~lr-dfM~~Tld~t~~qL~~i~~iIk~~nP~Ly~~l~~aev-gtlFa 218 (395)
T KOG2595|consen 141 LNYYQGYHDIVVTFLLVVGELEALSLMEELSTLHLR-DFMLPTLDFTVRQLRLISPIIKEVNPELYQFLQSAEV-GTLFA 218 (395)
T ss_pred cchhcchhHHHHHHHHhhhhHhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHhhcc-cceeh
Confidence 999999999999999999999999999999865554 8899999999999999999999999999999999888 56899
Q ss_pred HHHHHHHhccCC-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHH
Q psy4079 211 LHWFLTLFASVV-HFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAIT 267 (294)
Q Consensus 211 ~~WfltlF~~~~-p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il 267 (294)
..|.+|||++.+ ++..++|++|.|++...-..++++.+++.+.+++|++++..+..+
T Consensus 219 LsWllTWFaH~L~~~~~vvRlfD~Flas~pl~piyv~A~vvL~r~~eIl~~~~dms~~ 276 (395)
T KOG2595|consen 219 LSWLLTWFAHNLKDIRIVVRLFDFFLASHPLLPIYVYAAVVLYRRSEILKCDCDMSLL 276 (395)
T ss_pred hhHHHHHHhhcchhHHHHHHHHHHHHhcCcchhHHHHHHHhhhhHHHHHHHHhhhHHH
Confidence 999999999986 589999999999998888889999999999999999997766644
No 16
>KOG1091|consensus
Probab=99.73 E-value=1.9e-17 Score=158.65 Aligned_cols=186 Identities=18% Similarity=0.191 Sum_probs=136.8
Q ss_pred cccc-cccCCCCCcchhcccCCCCchhHHHHHHHhhhHhhh---cCccccCchHHHHHhccCC-----------------
Q psy4079 90 GCPS-KSAGNWPKQAIVFLNLPVDSGVVVNALDFGSGGWWF---ESNYCQGTGMIAASLLLLM----------------- 148 (294)
Q Consensus 90 ~~i~-dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~i~~~~---~iGY~QGM~~Iaa~LL~~~----------------- 148 (294)
+.+. |+.||||++..|+.. ...++.++.++.+|+. ++||-|||+.+.|+++++.
T Consensus 106 ~~i~qDvsRtfPe~~~fFqs-----~~~q~mLr~iLl~~~lehp~i~YrQGMHElLAPl~fVl~~D~q~l~h~se~~~~~ 180 (625)
T KOG1091|consen 106 KTIDQDVSRTFPEHSLFFQS-----PEVQGMLRRILLLYALEHPEIGYRQGMHELLAPLLFVLHVDNQALLHVSESLFDK 180 (625)
T ss_pred HhhcchhhccCcchhhhhcC-----chhhHHHHHHHHHHHhhchhhhHHhhhhhhhhhhhhheehhHHHHHHHHHhhhhh
Confidence 4454 999999999444332 2334455555666655 9999999999999998664
Q ss_pred ---CHHH-----------HH--HHHHHHHhccCC-------------------C---CCCCCCchhhHHhHHHHHHHHHh
Q psy4079 149 ---EEEE-----------AF--WTLSAIVEDLLP-------------------A---SYYTPNLIGIQADQKVLRSLVAS 190 (294)
Q Consensus 149 ---~E~~-----------aF--~~~~~l~~~~~~-------------------~---~~f~~~~~~l~~~~~~~~~ll~~ 190 (294)
.|.+ ++ -+++.+|..... . +-+.++.+.+......+.+++.+
T Consensus 181 l~f~E~d~iy~~~y~k~d~dn~~lqs~lmls~~~~~e~e~g~~~~e~~ie~day~~~d~l~~~l~~v~e~~~~~~~lL~~ 260 (625)
T KOG1091|consen 181 LGFEERDVIYNFLYLKTDLDNTELQSVLMLSDEYGYEEELGIVLSEKLIEHDAYVMFDALMPGLPPVFEANFAQYHLLAK 260 (625)
T ss_pred cCcchhhhhhhHHHHhhhccchhHHHHHHhhhccccccCcceecCcccCCcCcccchhhhcccchhHHHHhhhhhhhhhh
Confidence 1222 23 244455532100 0 11224466677778889999999
Q ss_pred hChHHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHH-HHHHcCC--hHHHHHHHHHHHHhHHHhhCCCCHHHHH
Q psy4079 191 GLPQLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWD-LLFLDGS--MVLFQITLGMLKIKDTIYIVLSSPIAIT 267 (294)
Q Consensus 191 ~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD-~~l~eG~--~~l~~ialAiL~~~k~~Ll~~~d~~~il 267 (294)
.++.++.||.+.|++|++|..||...||.++||+..++.+|| +.++++. .+.-.+++|+|.+.++.|+..++.. .+
T Consensus 261 ~D~~Lh~HL~~l~i~pqifgiRWlRlLFGREfpL~dLLiVWD~~l~~d~pr~~Lv~~m~VsmLL~IRd~Llss~~~t-cL 339 (625)
T KOG1091|consen 261 VDKSLHSHLVELGIEPQIFGIRWLRLLFGREFPLQDLLIVWDHVLIFDSPRGILVACMFVSMLLYIRDSLLSSEYQT-CL 339 (625)
T ss_pred ccHHHHHHHHhcCCchHHHHHHHHHHHHcchhHHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHHHHHHHhcchh-HH
Confidence 999999999999999999999999999999999999999999 7777776 4566789999999999999998777 55
Q ss_pred hhh----ccccchhhhhh
Q psy4079 268 MGT----CVYQLRGLVYM 281 (294)
Q Consensus 268 ~~l----~~~~~~~~~~~ 281 (294)
+++ ...+++.++.+
T Consensus 340 ~~Lm~yP~~~Dv~~~iek 357 (625)
T KOG1091|consen 340 QYLMNYPEIIDVDKFIEK 357 (625)
T ss_pred HHHhcCCCcCcHHHHHHH
Confidence 555 33445555443
No 17
>KOG2197|consensus
Probab=99.67 E-value=8.5e-17 Score=156.85 Aligned_cols=160 Identities=19% Similarity=0.276 Sum_probs=136.1
Q ss_pred cccCCCCCcchhcccCCCCchhHHHHHHHhhhHhhh-----cCccccCchHHHHHhccCC-CHHHHHHHHHHHHhccCCC
Q psy4079 94 KSAGNWPKQAIVFLNLPVDSGVVVNALDFGSGGWWF-----ESNYCQGTGMIAASLLLLM-EEEEAFWTLSAIVEDLLPA 167 (294)
Q Consensus 94 dv~Rtfp~~~~f~~~~~~~~~~~~~~l~l~~i~~~~-----~iGY~QGM~~Iaa~LL~~~-~E~~aF~~~~~l~~~~~~~ 167 (294)
|+.||.+.+.++......+ .-++..++.+| ++||||||+++.++++..+ +|.+|||||+.+|++...
T Consensus 244 dv~rtDr~~~~~~~~~n~~------~~~l~~iL~ty~~~~~d~GY~QgmSDllspi~~v~~de~~aFwcFv~fm~~~~~- 316 (488)
T KOG2197|consen 244 DVGRTDRSLEFYEGEENPH------LARLVDILLTYAVYDFDLGYCQGMSDLLSPILIVMEDEVEAFWCFVGFMDRLRH- 316 (488)
T ss_pred hccccchhhhhhhcccccC------HHHHHHHHhhcccccCccccccCchhhcCcceeeecCchHHHHHHHHHHHHHhh-
Confidence 8889988888876533311 12234444444 9999999999999999988 788999999999998554
Q ss_pred CCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHc--CChHHHHH
Q psy4079 168 SYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLD--GSMVLFQI 245 (294)
Q Consensus 168 ~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~e--G~~~l~~i 245 (294)
-|..+..+++..+..+..+++..+|.+|+||++.+.....++++|++..|-++|..++++++|+.++.. ..++.+++
T Consensus 317 -nF~~d~~~~~~Ql~~~~~li~~~dp~l~~hLe~~d~~~~~f~fr~l~v~frrEf~~ed~l~LWEvlw~~~~~~~f~~~~ 395 (488)
T KOG2197|consen 317 -NFRIDQSGMQTQLAQLSSLIQELDPRLYQHLEKLDAGDLFFCFRMLLVPFRREFEFEDSLRLWEVLWTDLPSPHFHLYV 395 (488)
T ss_pred -cCccccccHHHHhhhhhhhccccCHHHHhhccccCCCccceeeehhhcccccccccccHHHHHHHHHhcCccchHHHHH
Confidence 377788899999999999999999999999999999999999999999999999999999999999964 45889999
Q ss_pred HHHHHHHhHHHhhCCC
Q psy4079 246 TLGMLKIKDTIYIVLS 261 (294)
Q Consensus 246 alAiL~~~k~~Ll~~~ 261 (294)
+.|++....+.|+...
T Consensus 396 ~~~~l~~~~~~l~~~~ 411 (488)
T KOG2197|consen 396 APAILNKDPQTLMEQG 411 (488)
T ss_pred HHhhhhcchHHHHhcC
Confidence 9999999888888773
No 18
>KOG4436|consensus
Probab=99.60 E-value=6.7e-16 Score=152.71 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=174.0
Q ss_pred cceee-cCCCCCccc-chHHHHhhh-----------hC-----CCcc-cccccccc-cccCCCCCcchhcccCCC-Cchh
Q psy4079 57 VESRV-VGCPSKSAG-NWPKQAIVF-----------LN-----LPVE-SRVVGCPS-KSAGNWPKQAIVFLNLPV-DSGV 115 (294)
Q Consensus 57 ~~sr~-~GIP~~lRg-vW~~L~~~~-----------~~-----~~~~-~~~~~~i~-dv~Rtfp~~~~f~~~~~~-~~~~ 115 (294)
+..++ .|||+..|- +|+.+.... -+ ...+ .-++..|. |+.||+|.|++|+..... -+..
T Consensus 177 l~e~Ve~~~p~~frli~~qlLssatd~~q~~I~e~~sdl~~~s~~~Ek~~~~~~Irrdi~~~~~eh~~fke~~s~~~~~~ 256 (948)
T KOG4436|consen 177 LKELVEGGIPMHFRLIRWQLLSSATDREQALIFEDYSDLAPCSSQQEKELHIGIIRRDIERTYPEHYFFKEQSSTVCSDI 256 (948)
T ss_pred hHHHHhcCCchHHHHHHHHHhcccccchhhHHHHHHHHHhhhcchhhhhHHHHHHHHHhhccCcceeeeccCccCCcchh
Confidence 45566 999999999 999886431 11 1111 22334454 999999999999876543 1111
Q ss_pred HHHHHHHhhhHhhh-----cCccccCchHHHHHhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHh
Q psy4079 116 VVNALDFGSGGWWF-----ESNYCQGTGMIAASLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVAS 190 (294)
Q Consensus 116 ~~~~l~l~~i~~~~-----~iGY~QGM~~Iaa~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~ 190 (294)
.+..-.+.+++-+| ++|||||-+.+++.+++.+++|.+|..++.+|..+..+..+.+.+..+...+..+....+.
T Consensus 257 ~~~~d~LfN~~K~~~~~~~E~ifsqGs~~m~Gll~l~~~~E~assv~~~lm~~~rl~~l~kpe~~~l~~~~~q~e~~~q~ 336 (948)
T KOG4436|consen 257 RFAQDQLFNVAKAYSTKDLEVIFSQGSAFMVGLLLLQMPVEEASSVKVQLMILYRLRELSKPEMEPLGLCMFQLECTNQD 336 (948)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhccchHHHHHHHHhcCcHHHHHHHHHHHHHhhcccccCCcccchhHHHHHhhcccccc
Confidence 11111233333344 9999999999999999999999999999999999998899999999999899999999999
Q ss_pred hCh-HHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhh
Q psy4079 191 GLP-QLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMG 269 (294)
Q Consensus 191 ~~P-~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~ 269 (294)
..| .++.|+.+.+++.++|...||++.|...+|+...-|+.|.|.++|-...|+.++|++...++.=+...|++...++
T Consensus 337 ~sp~dl~sH~~eq~~h~S~~~rs~flt~~ltt~Pi~~a~r~~~~f~~egllk~fr~~ia~~~~~~d~~~~s~D~EG~~~~ 416 (948)
T KOG4436|consen 337 QSPMDLFSHFPEQHFHTSMYARSWFLTNFLTTFPIFMAARISDTFSSEGLLKRFRDSIAYLHQLRDIELESLDMEGMLSY 416 (948)
T ss_pred cchhHHhhcccccCCCccHHHHHHHHHhhcccCchhhccccccccccccHHHHHhhhHHHHHHHhhhhhhccCccccccc
Confidence 999 9999999999999999999999999999999999999999999999999999999997667666677777777666
Q ss_pred hc
Q psy4079 270 TC 271 (294)
Q Consensus 270 l~ 271 (294)
.+
T Consensus 417 ~q 418 (948)
T KOG4436|consen 417 FQ 418 (948)
T ss_pred hh
Confidence 54
No 19
>KOG3636|consensus
Probab=99.30 E-value=1.3e-11 Score=116.00 Aligned_cols=136 Identities=24% Similarity=0.330 Sum_probs=113.8
Q ss_pred cCccccCchHHHH---HhccCCCHHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcch
Q psy4079 130 ESNYCQGTGMIAA---SLLLLMEEEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIEL 206 (294)
Q Consensus 130 ~iGY~QGM~~Iaa---~LL~~~~E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~ 206 (294)
++.|......|.- ++++.+|..+.|-+|..++++|.|++.-..+.+ ...|+-|++.++|+|..||+...+.|
T Consensus 107 n~~Y~~d~gWi~lL~pl~~L~lprsd~fN~F~ai~~kYIPkdcrpkg~~-----Fh~FRLLlqYHdPelc~~LdtkkitP 181 (669)
T KOG3636|consen 107 NMDYIKDIGWITLLEPLLLLNLPRSDEFNVFFAITTKYIPKDCRPKGQI-----FHLFRLLLQYHDPELCNHLDTKKITP 181 (669)
T ss_pred CCcccccccHHHHHHHHHHhcCCcchhhhhhHhhhhcccCCCCCCCCcc-----chHHHHHHHhcCHHHhhhhhccccCc
Confidence 8888887765543 344667999999999999999999765554432 34588999999999999999999999
Q ss_pred hHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChH-HHHHHHHHHHHhHHHhhCCC--CHHHHHhhh
Q psy4079 207 SLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMV-LFQITLGMLKIKDTIYIVLS--SPIAITMGT 270 (294)
Q Consensus 207 ~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~-l~~ialAiL~~~k~~Ll~~~--d~~~il~~l 270 (294)
++|+..||-+||+...+.+.+.-+||.|+..++.+ +|+.++-||..-|++||+.+ +-+++.+.+
T Consensus 182 d~Y~lnWf~sLFas~~Stev~~a~WdlY~qqaDPF~vffLaliiLiNake~ILq~~sdsKEe~ikfL 248 (669)
T KOG3636|consen 182 DMYTLNWFASLFASSMSTEVCHALWDLYIQQADPFLVFFLALIILINAKEEILQVKSDSKEEAIKFL 248 (669)
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCceehHHHHHHHhcccHHHHhhhccccHHHHHHHH
Confidence 99999999999999999999999999999998876 56678888999999999884 445565554
No 20
>KOG2801|consensus
Probab=98.48 E-value=6.7e-07 Score=80.97 Aligned_cols=126 Identities=17% Similarity=0.320 Sum_probs=99.0
Q ss_pred cCccccCchHHHHHhccCC-CHHHHHHHHHHHHhccCC-CCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchh
Q psy4079 130 ESNYCQGTGMIAASLLLLM-EEEEAFWTLSAIVEDLLP-ASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELS 207 (294)
Q Consensus 130 ~iGY~QGM~~Iaa~LL~~~-~E~~aF~~~~~l~~~~~~-~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~ 207 (294)
+|.+|+.+..++|.+|.+. +|.++|---+.++.-..+ +.....++-.....+..|..++.++...-++-+-...-+..
T Consensus 127 disfcpalpavvalllhysideaecfekacrilacndpgrrlidqsflafesscmtfgdlvnkycqaahklmvavsedvl 206 (559)
T KOG2801|consen 127 DISFCPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAHKLMVAVSEDVL 206 (559)
T ss_pred CcccCcchHHHHHHHHHhcccHHHHHHHhheeeeecCcchhhhhhHHHHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 9999999999999999775 999999887777753322 23444556666777888889998888777766654444444
Q ss_pred HhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHH
Q psy4079 208 LITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTI 256 (294)
Q Consensus 208 ~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~ 256 (294)
.....|-..+|. ++|+....|++|.|+.||.++++++++|||+.+.+.
T Consensus 207 qvyadwqrwlfg-elplcyfarvfdvflvegykvlyrvalailkffhkv 254 (559)
T KOG2801|consen 207 QVYADWQRWLFG-ELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKV 254 (559)
T ss_pred HHHHHHHHHHhc-cchHHHHHHHhhheeecchHHHHHHHHHHHHHHHHh
Confidence 445678777775 599999999999999999999999999999988653
No 21
>PF14961 BROMI: Broad-minded protein
Probab=96.77 E-value=0.01 Score=63.12 Aligned_cols=146 Identities=14% Similarity=0.143 Sum_probs=107.8
Q ss_pred ccccCchHHHHHhccCC--CHHHHHHHHHHHHhc----c--CCCCCC----CC-----C-chhhHHhHHHHHHHHHhhCh
Q psy4079 132 NYCQGTGMIAASLLLLM--EEEEAFWTLSAIVED----L--LPASYY----TP-----N-LIGIQADQKVLRSLVASGLP 193 (294)
Q Consensus 132 GY~QGM~~Iaa~LL~~~--~E~~aF~~~~~l~~~----~--~~~~~f----~~-----~-~~~l~~~~~~~~~ll~~~~P 193 (294)
|=..|-.-.++.+.+.+ +.+.+...+.++-.. + .++--. .. + .|.....+..++.+++...|
T Consensus 1100 ~~y~g~DWFvstvfli~~Gd~e~~~~fL~~fS~ll~SaflW~pRlh~s~~l~~~~~~s~i~p~~~~~~~~vE~ll~~E~P 1179 (1296)
T PF14961_consen 1100 GSYPGHDWFVSTVFLIMLGDKERSLQFLQRFSRLLTSAFLWPPRLHASIHLPVDTAESGIHPVYFCSCHYVEMLLKAELP 1179 (1296)
T ss_pred CCCCCchhHHHHHHHHHcCChhHhHHHHHHHHHHHHHhHhccccccccccCCchhhhcCCCchhhhHHHHHHHHHHhhcc
Confidence 44467787777776666 556565554444322 1 111111 11 1 12223346789999999999
Q ss_pred HHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhHHHhhCCCCHHHHHhhhccc
Q psy4079 194 QLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITLGMLKIKDTIYIVLSSPIAITMGTCVY 273 (294)
Q Consensus 194 ~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ialAiL~~~k~~Ll~~~d~~~il~~l~~~ 273 (294)
.++.-|...|..+...+.+|+..+|=+.++...++.-.=..+..|.++-.++.+|+|+..+++|++.....++..-++..
T Consensus 1180 ~V~saf~~sg~tpsqi~~rW~~QcFWnyldW~eI~~y~~~cil~G~dyqvY~~VailkHlq~~ilq~~q~q~L~~flke~ 1259 (1296)
T PF14961_consen 1180 LVFSAFRMSGFTPSQICQRWLSQCFWNYLDWPEICHYIAICILYGPDYQVYICVAILKHLQPEILQHTQTQDLQVFLKEE 1259 (1296)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhcCccceeehhHHHHHHhhHHHHHhhhhchHHHHhhhc
Confidence 99999999999999999999999999999999999988888999999999999999999999999886555554444444
Q ss_pred cchh
Q psy4079 274 QLRG 277 (294)
Q Consensus 274 ~~~~ 277 (294)
++++
T Consensus 1260 ~l~g 1263 (1296)
T PF14961_consen 1260 ALRG 1263 (1296)
T ss_pred cccc
Confidence 4444
No 22
>KOG1648|consensus
Probab=85.88 E-value=0.043 Score=53.47 Aligned_cols=116 Identities=20% Similarity=0.313 Sum_probs=67.5
Q ss_pred cCccccCchHHHHHhccCCC-HHHHHHHHHHHHhccCCCCCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhH
Q psy4079 130 ESNYCQGTGMIAASLLLLME-EEEAFWTLSAIVEDLLPASYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSL 208 (294)
Q Consensus 130 ~iGY~QGM~~Iaa~LL~~~~-E~~aF~~~~~l~~~~~~~~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~ 208 (294)
+-||.|||.++.++++..+. |.-+--|+.-+|-+-.- -.+..+++...+-..+ +++..+|-+. .++ ..+.
T Consensus 645 ~~~~~~~~~dl~~p~~~~~ed~~~~~e~~s~~~~~q~~---~~~q~~~~~~~l~~~r-~~~v~~~l~s-~id----~~qa 715 (813)
T KOG1648|consen 645 EEGYTQGMCDLLAPLLVTFEDEALTLECFSLLMLRQRG---KFPQRPGMSKCLLNLR-LIQVVDPLIS-DID----YAQA 715 (813)
T ss_pred ccccccchhhccCCcCCChhhcccccCCCcHHHHHhcc---cCCCCCCccccccccc-chhhhcchhc-chh----hhhh
Confidence 89999999999999998762 22222244434422111 0112222222221122 4444455221 111 1233
Q ss_pred hHHHHHHHHhccCCCHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHhH
Q psy4079 209 ITLHWFLTLFASVVHFKILLRIWDLLFLD-----GSMVLFQITLGMLKIKD 254 (294)
Q Consensus 209 ~~~~WfltlF~~~~p~~~vlriWD~~l~e-----G~~~l~~ialAiL~~~k 254 (294)
..++||+.-|.+.++.+.....|...+.. .+.+-+++++|.-.++.
T Consensus 716 ~~f~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~ 766 (813)
T KOG1648|consen 716 LSFRWFLLDFKRELSYECTYKVWEVIWAAQRLRITDDFAIFFGLATTNYHD 766 (813)
T ss_pred cceeeeccCcccccCCCCcceeeEeeccccccccCcchhhhhhhHHHhhHH
Confidence 45899999999999999999999988865 23566677777744433
No 23
>KOG2224|consensus
Probab=62.57 E-value=2.5 Score=40.84 Aligned_cols=34 Identities=21% Similarity=0.558 Sum_probs=31.0
Q ss_pred cCccccCchHHHHHhcc-CCCHHHHHHHHHHHHhc
Q psy4079 130 ESNYCQGTGMIAASLLL-LMEEEEAFWTLSAIVED 163 (294)
Q Consensus 130 ~iGY~QGM~~Iaa~LL~-~~~E~~aF~~~~~l~~~ 163 (294)
=+|-.|||++++|++|. +++|.++||||+.+|.+
T Consensus 565 fvglmqgmsdlvapilaevldesdtfwcfvglmqn 599 (781)
T KOG2224|consen 565 FVGLMQGMSDLVAPILAEVLDESDTFWCFVGLMQN 599 (781)
T ss_pred hhhhhccchhhhhhHHHhhhccccchhhhhhhhcc
Confidence 58899999999999996 56999999999999985
No 24
>PF10815 ComZ: ComZ; InterPro: IPR024558 ComZ, which contains a leucine zipper motif, negatively regulates transcription of the ComG operon [].
Probab=55.14 E-value=21 Score=24.26 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=33.7
Q ss_pred HHHHHHHhhChHHHHHHhhCCcchhHhHHHHHHHHhccC
Q psy4079 183 VLRSLVASGLPQLELSLLQHDIELSLITLHWFLTLFASV 221 (294)
Q Consensus 183 ~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~ 221 (294)
.|-.+--++.|+--+.|++.||+.+.-..+-++++|...
T Consensus 5 ~FmqIaMK~lPEak~~L~k~GIeLsme~~qP~m~L~~~V 43 (56)
T PF10815_consen 5 EFMQIAMKYLPEAKEELDKKGIELSMEMLQPLMQLLTKV 43 (56)
T ss_pred HHHHHHHHHhHHHHHHHHHcCccCCHHHHHHHHHHHHHH
Confidence 356777889999999999999999999889999998764
No 25
>KOG1102|consensus
Probab=47.98 E-value=4.5 Score=39.08 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=69.8
Q ss_pred CCCCCCchhhHHhHHHHHHHHHhhChHHHHHHhhCCcchhHhHHHHHHHHhccCCCHHHHHHHHHHHHHcCChHHHHHHH
Q psy4079 168 SYYTPNLIGIQADQKVLRSLVASGLPQLELSLLQHDIELSLITLHWFLTLFASVVHFKILLRIWDLLFLDGSMVLFQITL 247 (294)
Q Consensus 168 ~~f~~~~~~l~~~~~~~~~ll~~~~P~L~~hL~~~~i~~~~~~~~WfltlF~~~~p~~~vlriWD~~l~eG~~~l~~ial 247 (294)
++...+...+...............+.-..|+...+ ........|....|..........++||.+..+|...+..+.-
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (397)
T KOG1102|consen 47 GFQSSNERKLTELRDSPESIPDLSQSKRPGHVDSSE-PTNELYPKSDERIFKDKPLLSLTLDLWDVKLLEGEQELTALSS 125 (397)
T ss_pred ccccCCcccccccccCcccccccccccccccccccc-cccccccccccccccccccccccchhHHHHhhhhHHHHHHHHH
Confidence 445555555555444445555566667778888888 7788888999999999999999999999999999999988888
Q ss_pred HHHHHhHHHhhCC
Q psy4079 248 GMLKIKDTIYIVL 260 (294)
Q Consensus 248 AiL~~~k~~Ll~~ 260 (294)
+.++....+.++.
T Consensus 126 ~~~~~~~~~~~~l 138 (397)
T KOG1102|consen 126 SWLKVILRRPLKL 138 (397)
T ss_pred HhhhhccccHHHH
Confidence 8888764444443
No 26
>PF08109 Antimicrobial14: Lactocin 705 family; InterPro: IPR012517 This family consists of lactocin 705 which is a bacteriocin produced by Lactobacillus casei CRL 705. Lactocin 705 is a class IIb bacteriocin, whose activity depends upon the complementation of two peptides (705-alpha and 705-beta) of 33 amino acid residues each. Lactocin 705 is active against several Gram-positive bacteria, including food-borne pathogens and is a good candidate to be used for biopreservation of fermented meats [].
Probab=32.65 E-value=23 Score=20.55 Aligned_cols=14 Identities=29% Similarity=0.316 Sum_probs=10.1
Q ss_pred CccccCchHHHHHh
Q psy4079 131 SNYCQGTGMIAASL 144 (294)
Q Consensus 131 iGY~QGM~~Iaa~L 144 (294)
.||.||+.+..--.
T Consensus 3 sgyiqgipdflkgy 16 (31)
T PF08109_consen 3 SGYIQGIPDFLKGY 16 (31)
T ss_pred cccccccHHHHHHH
Confidence 48999998765433
No 27
>PF13041 PPR_2: PPR repeat family
Probab=21.14 E-value=1.2e+02 Score=19.24 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=19.9
Q ss_pred HHHHHHhhCCcchhHhHHHHHHHHhc
Q psy4079 194 QLELSLLQHDIELSLITLHWFLTLFA 219 (294)
Q Consensus 194 ~L~~hL~~~~i~~~~~~~~WfltlF~ 219 (294)
++++.+.+.|+.|+.++..-++..|+
T Consensus 24 ~l~~~M~~~g~~P~~~Ty~~li~~~~ 49 (50)
T PF13041_consen 24 KLFKEMKKRGIKPDSYTYNILINGLC 49 (50)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHc
Confidence 46778888999999888777666554
Done!