Query psy4082
Match_columns 86
No_of_seqs 36 out of 38
Neff 3.1
Searched_HMMs 13730
Date Sat Aug 17 00:52:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4082.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4082hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i1ip_ d.92.1.5 (P:) Neurolys 17.8 17 0.0012 28.0 0.7 14 3-16 594-607 (665)
2 d1s4bp_ d.92.1.5 (P:) Neurolys 16.7 19 0.0014 27.5 0.9 13 3-15 583-595 (654)
3 d1q3qa2 c.8.5.2 (A:217-369) Th 12.0 28 0.0021 21.4 0.5 20 12-31 82-101 (153)
4 d1ssqa_ b.81.1.6 (A:) Serine a 9.2 63 0.0046 21.3 1.6 19 4-23 102-120 (241)
5 d1assa_ c.8.5.2 (A:) Thermosom 8.5 46 0.0033 20.4 0.5 21 12-32 83-103 (152)
6 d1a6db2 c.8.5.2 (B:216-367) Th 8.1 48 0.0035 20.3 0.5 20 12-31 81-100 (152)
7 d1x6aa1 g.39.1.3 (A:8-41) Lim 6.2 76 0.0056 16.3 0.6 17 45-61 15-31 (34)
8 d1lvaa3 a.4.5.35 (A:511-574) C 6.0 70 0.0051 17.2 0.4 15 15-29 43-57 (64)
9 d1bt3a_ a.86.1.2 (A:) Catechol 5.4 1.2E+02 0.0088 20.9 1.5 15 7-21 113-127 (341)
10 d1gmla_ c.8.5.2 (A:) Thermosom 5.0 91 0.0066 19.1 0.5 19 13-31 88-106 (168)
No 1
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.78 E-value=17 Score=28.01 Aligned_cols=14 Identities=36% Similarity=0.757 Sum_probs=11.9
Q ss_pred chhhhhhhhhhhhh
Q psy4082 3 AAGYYQLLWHRVSV 16 (86)
Q Consensus 3 ~~~~~~~~~~~~~~ 16 (86)
+||||..||-+|-.
T Consensus 594 ~A~YYsYlws~vla 607 (665)
T d1i1ip_ 594 DGQYYGYLWSEVFS 607 (665)
T ss_dssp TTCTTHHHHHHHHH
T ss_pred ccccHHHHHHHHHH
Confidence 68999999998853
No 2
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.73 E-value=19 Score=27.52 Aligned_cols=13 Identities=46% Similarity=0.912 Sum_probs=11.4
Q ss_pred chhhhhhhhhhhh
Q psy4082 3 AAGYYQLLWHRVS 15 (86)
Q Consensus 3 ~~~~~~~~~~~~~ 15 (86)
+||||..||-+|-
T Consensus 583 ~a~YYsYlws~vl 595 (654)
T d1s4bp_ 583 DAQYYGYLWSEVY 595 (654)
T ss_dssp TTTTTHHHHHHHH
T ss_pred ccchHHHHHHHHH
Confidence 6899999999874
No 3
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=11.98 E-value=28 Score=21.40 Aligned_cols=20 Identities=30% Similarity=0.607 Sum_probs=15.0
Q ss_pred hhhhhhHhhhhhhhhcchhh
Q psy4082 12 HRVSVHFLARVGIMVNAPLR 31 (86)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~mk 31 (86)
+....|||++.|||+=--.+
T Consensus 82 ~~~a~~~l~~~gI~~v~~v~ 101 (153)
T d1q3qa2 82 DDLAQHYLAKYGIMAVRRVK 101 (153)
T ss_dssp CHHHHHHHHHTTCEEECSCC
T ss_pred cHHHHHHHHHcCCceeccCC
Confidence 35678999999999854444
No 4
>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=9.25 E-value=63 Score=21.32 Aligned_cols=19 Identities=21% Similarity=0.432 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhhhHhhhhh
Q psy4082 4 AGYYQLLWHRVSVHFLARVG 23 (86)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~ 23 (86)
.||.-+.|||++ |||-+-|
T Consensus 102 ~Gf~Al~~yRia-h~l~~~~ 120 (241)
T d1ssqa_ 102 KGFHAIQSYRIT-HYLWNQN 120 (241)
T ss_dssp HHHHHHHHHHHH-HHHHTTT
T ss_pred hhHHHHHHHhhh-hhhhhhh
Confidence 477788999987 4554443
No 5
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=8.45 E-value=46 Score=20.40 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=15.9
Q ss_pred hhhhhhHhhhhhhhhcchhhh
Q psy4082 12 HRVSVHFLARVGIMVNAPLRT 32 (86)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~mkq 32 (86)
++...|||++-||++=..++.
T Consensus 83 ~~~a~~~l~k~gI~~v~~v~~ 103 (152)
T d1assa_ 83 DDVAQHYLAKEGIYAVRRVKK 103 (152)
T ss_dssp CHHHHHHHHHTTCEEECSCCH
T ss_pred cHHHHHHHHHcCCccccCCCH
Confidence 356789999999998655543
No 6
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=8.08 E-value=48 Score=20.33 Aligned_cols=20 Identities=25% Similarity=0.561 Sum_probs=14.6
Q ss_pred hhhhhhHhhhhhhhhcchhh
Q psy4082 12 HRVSVHFLARVGIMVNAPLR 31 (86)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~mk 31 (86)
+....|||++.||++=-..+
T Consensus 81 dd~a~~~l~k~gI~~v~~v~ 100 (152)
T d1a6db2 81 DDMAQHYLSRAGIYAVRRVK 100 (152)
T ss_dssp CHHHHHHHHHTTCEEECSCC
T ss_pred cHHHHHHHHHcCcchhccCC
Confidence 35678999999998744443
No 7
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.16 E-value=76 Score=16.29 Aligned_cols=17 Identities=35% Similarity=0.110 Sum_probs=11.7
Q ss_pred cCcccccceeeeccCcC
Q psy4082 45 YGSMQGIPMVASSPVRH 61 (86)
Q Consensus 45 ~~gmtG~PmVAsSPvrh 61 (86)
..-+||..||||.---|
T Consensus 15 ~~~itGpvMvAG~~K~H 31 (34)
T d1x6aa1 15 SLLMTGPFMVAGEFKYH 31 (34)
T ss_dssp CCBCCSCCBCCTTCCBC
T ss_pred HhhcccceeeecccccC
Confidence 34578999999864433
No 8
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=5.98 E-value=70 Score=17.19 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=11.5
Q ss_pred hhhHhhhhhhhhcch
Q psy4082 15 SVHFLARVGIMVNAP 29 (86)
Q Consensus 15 ~~~~~~~~~~~~~~~ 29 (86)
-.+.|+|.|..|+|-
T Consensus 43 lL~~l~~~G~lvkI~ 57 (64)
T d1lvaa3 43 LLHYLVREGVLVKIN 57 (64)
T ss_dssp HHHHHHHTTSEEESS
T ss_pred HHHHHHHCCCEEEec
Confidence 356788999988874
No 9
>d1bt3a_ a.86.1.2 (A:) Catechol oxidase {Sweet potato (Ipomoea batatas) [TaxId: 4120]}
Probab=5.36 E-value=1.2e+02 Score=20.85 Aligned_cols=15 Identities=27% Similarity=0.405 Sum_probs=12.1
Q ss_pred hhhhhhhhhhhHhhh
Q psy4082 7 YQLLWHRVSVHFLAR 21 (86)
Q Consensus 7 ~~~~~~~~~~~~~~~ 21 (86)
+=|.|||.-+.++.+
T Consensus 113 ~FlpWHR~YL~~fE~ 127 (341)
T d1bt3a_ 113 LFFPFHRWYLYFYER 127 (341)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHH
Confidence 357899998888776
No 10
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=4.95 E-value=91 Score=19.06 Aligned_cols=19 Identities=21% Similarity=0.448 Sum_probs=14.1
Q ss_pred hhhhhHhhhhhhhhcchhh
Q psy4082 13 RVSVHFLARVGIMVNAPLR 31 (86)
Q Consensus 13 ~~~~~~~~~~~~~~~~~mk 31 (86)
....|||++.||++=--++
T Consensus 88 ~~a~~~L~~~gI~~~~rv~ 106 (168)
T d1gmla_ 88 DLAQHYLMRANVTAIRRVR 106 (168)
T ss_dssp HHHHHHHHHTTCEEECCCC
T ss_pred HHHHHHHHHCCCeeeccCC
Confidence 4567999999998754444
Done!