BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4086
(305 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195427966|ref|XP_002062046.1| GK17327 [Drosophila willistoni]
gi|194158131|gb|EDW73032.1| GK17327 [Drosophila willistoni]
Length = 603
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/260 (58%), Positives = 188/260 (72%), Gaps = 24/260 (9%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 254 EQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYA 313
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 314 ENAVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQ 373
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++
Sbjct: 374 QMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFK 426
Query: 234 GPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAG 282
P R W SA+ +AY+ + TPI + Y RF+A P G P
Sbjct: 427 TPDPNTRAWRDVSAEGIPVAYDPTLQQNGVSVNVGTPI--GVPYSRFSAPP--VGGYPVA 482
Query: 283 YTPWVPTQYVMPAPHMSQVE 302
+ W+P Y+M P ++QV+
Sbjct: 483 GSQWIPG-YMMTQP-ITQVD 500
>gi|251765113|sp|B4MM23.2|SHEP_DROWI RecName: Full=Protein alan shepard
Length = 581
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/260 (58%), Positives = 188/260 (72%), Gaps = 24/260 (9%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 232 EQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYA 291
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 292 ENAVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQ 351
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++
Sbjct: 352 QMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFK 404
Query: 234 GPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAG 282
P R W SA+ +AY+ + TPI + Y RF+A P G P
Sbjct: 405 TPDPNTRAWRDVSAEGIPVAYDPTLQQNGVSVNVGTPI--GVPYSRFSAPP--VGGYPVA 460
Query: 283 YTPWVPTQYVMPAPHMSQVE 302
+ W+P Y+M P ++QV+
Sbjct: 461 GSQWIPG-YMMTQP-ITQVD 478
>gi|195376319|ref|XP_002046944.1| GJ12205 [Drosophila virilis]
gi|194154102|gb|EDW69286.1| GJ12205 [Drosophila virilis]
Length = 868
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 184/258 (71%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDLINMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 513 LSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEG 572
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++LAKY VVSTRILRD
Sbjct: 573 AVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQM 632
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 633 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 685
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF G G P +
Sbjct: 686 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRF--GAPQVGGYPVAGS 741
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 742 QWIPG-YMMTQP-ITQVD 757
>gi|195014142|ref|XP_001983966.1| GH15273 [Drosophila grimshawi]
gi|251765067|sp|B4IX08.1|SHEP_DROGR RecName: Full=Protein alan shepard
gi|193897448|gb|EDV96314.1| GH15273 [Drosophila grimshawi]
Length = 609
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 184/258 (71%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDLINMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 254 LSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEG 313
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++LAKY VVSTRILRD
Sbjct: 314 AVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQM 373
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 374 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 426
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF G G P +
Sbjct: 427 DPSARAWRDVSAEGIPVAYDPSMQQNGVSVNVGTPI--GVPYSRF--GAPQVGGYPVAGS 482
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 483 QWIPG-YMMTQP-ITQVD 498
>gi|251765112|sp|B4LFQ9.2|SHEP_DROVI RecName: Full=Protein alan shepard
Length = 595
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 184/258 (71%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDLINMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 240 LSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEG 299
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++LAKY VVSTRILRD
Sbjct: 300 AVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLAKYGQVVSTRILRDQQM 359
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 360 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 412
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF G G P +
Sbjct: 413 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRF--GAPQVGGYPVAGS 468
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 469 QWIPG-YMMTQP-ITQVD 484
>gi|170045947|ref|XP_001850551.1| single-stranded DNA-binding protein mssp-1 [Culex quinquefasciatus]
gi|167868784|gb|EDS32167.1| single-stranded DNA-binding protein mssp-1 [Culex quinquefasciatus]
Length = 416
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 163/211 (77%), Gaps = 8/211 (3%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
TN G TP EQLSKTNLYIRGL Q TTDKDLINMC+QYG IISTKAILDKTTN
Sbjct: 49 TNTNNTMGPSNTPQQTEQLSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTN 108
Query: 98 KCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESL 157
KC+GYGFVDFES A AVK LQ KGI AQMA+QQEQDPTNLYIANLPLN+KE D+E+L
Sbjct: 109 KCKGYGFVDFESPACAEGAVKGLQAKGIQAQMAKQQEQDPTNLYIANLPLNYKETDVENL 168
Query: 158 LAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L+KY V+STRILRD N SKGVGFAR+ES++KC+Q+IQ+FNG+ L G+KEPLLVKFAD
Sbjct: 169 LSKYGQVISTRILRDQNAQSKGVGFARMESREKCEQIIQIFNGTQLQGAKEPLLVKFADG 228
Query: 218 GLKKRGAGAGGPNIYRGPGAEVRLWGRDSAD 248
G KK+ N ++ P R W RD A+
Sbjct: 229 GSKKK-------NPFKSPDPNARTW-RDGAE 251
>gi|158295086|ref|XP_001688763.1| AGAP005964-PA [Anopheles gambiae str. PEST]
gi|157015867|gb|EDO63769.1| AGAP005964-PA [Anopheles gambiae str. PEST]
Length = 453
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 161/204 (78%), Gaps = 8/204 (3%)
Query: 45 GSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGF 104
G TP EQLSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGF
Sbjct: 90 GPSNTPQQTEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGNIISTKAILDKTTNKCKGYGF 149
Query: 105 VDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
VDFES A AVK LQ KGI AQMA+QQEQDPTNLYIANLPLN+KE D+E+LL+KY V
Sbjct: 150 VDFESPSCAEGAVKGLQAKGIQAQMAKQQEQDPTNLYIANLPLNYKETDVENLLSKYGQV 209
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
+STRILRD N SKGVGFAR+ES+DKC+Q+IQ+FNG+ LP +KEPLLVKFAD G KK+
Sbjct: 210 ISTRILRDQNAQSKGVGFARMESRDKCEQIIQIFNGTLLPNAKEPLLVKFADGGSKKK-- 267
Query: 225 GAGGPNIYRGPGAEVRLWGRDSAD 248
N ++ P R W R+ A+
Sbjct: 268 -----NPFKSPDPNTRTW-REGAE 285
>gi|158295088|ref|XP_316007.4| AGAP005964-PB [Anopheles gambiae str. PEST]
gi|157015868|gb|EAA10943.4| AGAP005964-PB [Anopheles gambiae str. PEST]
Length = 365
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 161/204 (78%), Gaps = 8/204 (3%)
Query: 45 GSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGF 104
G TP EQLSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGF
Sbjct: 2 GPSNTPQQTEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGNIISTKAILDKTTNKCKGYGF 61
Query: 105 VDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
VDFES A AVK LQ KGI AQMA+QQEQDPTNLYIANLPLN+KE D+E+LL+KY V
Sbjct: 62 VDFESPSCAEGAVKGLQAKGIQAQMAKQQEQDPTNLYIANLPLNYKETDVENLLSKYGQV 121
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
+STRILRD N SKGVGFAR+ES+DKC+Q+IQ+FNG+ LP +KEPLLVKFAD G KK+
Sbjct: 122 ISTRILRDQNAQSKGVGFARMESRDKCEQIIQIFNGTLLPNAKEPLLVKFADGGSKKK-- 179
Query: 225 GAGGPNIYRGPGAEVRLWGRDSAD 248
N ++ P R W R+ A+
Sbjct: 180 -----NPFKSPDPNTRTW-REGAE 197
>gi|194866955|ref|XP_001971976.1| GG14139 [Drosophila erecta]
gi|251765066|sp|B3NGA1.1|SHEP_DROER RecName: Full=Protein alan shepard
gi|190653759|gb|EDV51002.1| GG14139 [Drosophila erecta]
Length = 582
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 185/258 (71%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 228 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 287
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 288 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 347
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 348 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 400
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 401 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 456
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 457 QWIPG-YMMTQP-ITQVD 472
>gi|195491940|ref|XP_002093780.1| GE20568 [Drosophila yakuba]
gi|251765013|sp|B4PIS2.1|SHEP_DROYA RecName: Full=Protein alan shepard
gi|194179881|gb|EDW93492.1| GE20568 [Drosophila yakuba]
Length = 582
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/258 (58%), Positives = 185/258 (71%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 228 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 287
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 288 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 347
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 348 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 400
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 401 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 456
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 457 QWIPG-YMMTQP-ITQVD 472
>gi|242012562|ref|XP_002427001.1| predicted protein [Pediculus humanus corporis]
gi|212511235|gb|EEB14263.1| predicted protein [Pediculus humanus corporis]
Length = 412
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/256 (59%), Positives = 183/256 (71%), Gaps = 11/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+++CSQYG IISTKAILDKTTNKC+GYGFVDFES A
Sbjct: 53 EQLSKTNLYIRGLNQNTTDKDLVSLCSQYGTIISTKAILDKTTNKCKGYGFVDFESVQAA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV+ALQ KGI AQMA+QQEQDPTNLYIANLP ++KE D++++LA+Y V+STRILRD
Sbjct: 113 EGAVRALQSKGIQAQMAKQQEQDPTNLYIANLPTHYKENDVDNMLAQYGQVISTRILRDP 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA-GAGGPNIY 232
N SKGVGFAR+ESKDKC+Q+I+LFNG ++PGSKEPLLVKFAD G KKR +
Sbjct: 173 NGQSKGVGFARMESKDKCEQIIELFNGRSVPGSKEPLLVKFADGGNKKRTLYKTDQRGSW 232
Query: 233 RGP-----GAEVRLWGRDSADSQLAYEHPMTPIPATI-QYQRFTAGPGGTGHIPAGYTPW 286
R P G V + +A +H + PA + QY R T W
Sbjct: 233 RDPAEVAAGTPVAFDPNTMTQNGVATQHLL---PAALSQYGRHYGTAPAVPSYSLQATSW 289
Query: 287 VPTQYVMPAPHMSQVE 302
VP Q+VMP PHM+QV+
Sbjct: 290 VP-QFVMPHPHMAQVD 304
>gi|62484450|ref|NP_729054.3| alan shepard, isoform A [Drosophila melanogaster]
gi|75017119|sp|Q8MSV2.1|SHEP_DROME RecName: Full=Protein alan shepard
gi|21428546|gb|AAM49933.1| LD40028p [Drosophila melanogaster]
gi|61678484|gb|AAF50788.5| alan shepard, isoform A [Drosophila melanogaster]
Length = 578
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 176/244 (72%), Gaps = 22/244 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 228 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 287
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 288 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 347
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 348 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 400
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 401 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 456
Query: 285 PWVP 288
W+P
Sbjct: 457 QWIP 460
>gi|195337625|ref|XP_002035429.1| GM13927 [Drosophila sechellia]
gi|251765069|sp|B4HUE4.1|SHEP_DROSE RecName: Full=Protein alan shepard
gi|194128522|gb|EDW50565.1| GM13927 [Drosophila sechellia]
Length = 579
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 176/244 (72%), Gaps = 22/244 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 228 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 287
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 288 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 347
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 348 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 400
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 401 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 456
Query: 285 PWVP 288
W+P
Sbjct: 457 QWIP 460
>gi|386770626|ref|NP_001246636.1| alan shepard, isoform F [Drosophila melanogaster]
gi|383291772|gb|AFH04307.1| alan shepard, isoform F [Drosophila melanogaster]
Length = 590
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 145/244 (59%), Positives = 176/244 (72%), Gaps = 22/244 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 240 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 299
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 300 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 359
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 360 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 412
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 413 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 468
Query: 285 PWVP 288
W+P
Sbjct: 469 QWIP 472
>gi|198465625|ref|XP_001353703.2| GA16892 [Drosophila pseudoobscura pseudoobscura]
gi|198150245|gb|EAL29436.2| GA16892 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/258 (57%), Positives = 183/258 (70%), Gaps = 24/258 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 192 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 251
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 252 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 311
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 312 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 364
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ + Y+ M TPI + Y RF G G P +
Sbjct: 365 DPNARAWRDVSAEGIPVTYDPSMQQNGVSVNVGTPI--GVPYSRF--GAPQVGGYPVAGS 420
Query: 285 PWVPTQYVMPAPHMSQVE 302
W+P Y+M P ++QV+
Sbjct: 421 QWIPG-YMMTQP-LAQVD 436
>gi|345493904|ref|XP_001606757.2| PREDICTED: protein alan shepard-like isoform 1 [Nasonia
vitripennis]
Length = 559
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 177/253 (69%), Gaps = 7/253 (2%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 235 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 294
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 295 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 354
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
+ SKGVGFAR+ESK+KC+Q+IQ+FNG L G K+PLLVKFAD G KK+ I+R
Sbjct: 355 SGQSKGVGFARMESKEKCEQIIQMFNGKALHGGKDPLLVKFADGGSKKKSLYKS--TIWR 412
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWVPTQY 291
G + L SA Q +A H M P QY R + ++P PWV
Sbjct: 413 ETGDNMTLNYDTSAVGQNGVATAH-MLPAATLAQYGRHYSQAMPGYNVPGA--PWVTPYL 469
Query: 292 VMPAPHMSQVEVL 304
V PHM QV+++
Sbjct: 470 VQTPPHMQQVDMM 482
>gi|350398873|ref|XP_003485334.1| PREDICTED: protein alan shepard-like [Bombus impatiens]
Length = 478
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 144 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 203
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 204 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 263
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 264 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 321
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P TPWV
Sbjct: 322 ETGENITLNYDTSGVGQNGVATTH-MLPAATLTQYSRHYGQALPGYS--VPG--TPWVTP 376
Query: 290 QYVMPA-PHMSQVEVL 304
V A PHM QV+++
Sbjct: 377 YLVQTAPPHMQQVDMM 392
>gi|340712090|ref|XP_003394597.1| PREDICTED: protein alan shepard-like isoform 1 [Bombus terrestris]
Length = 540
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 215 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 274
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 275 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 334
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 335 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 392
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P TPWV
Sbjct: 393 ETGENITLNYDTSGVGQNGVATTH-MLPAATLTQYSRHYGQALPGYS--VPG--TPWVTP 447
Query: 290 QYVMPA-PHMSQVEVL 304
V A PHM QV+++
Sbjct: 448 YLVQTAPPHMQQVDMM 463
>gi|340712092|ref|XP_003394598.1| PREDICTED: protein alan shepard-like isoform 2 [Bombus terrestris]
Length = 549
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 215 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 274
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 275 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 334
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 335 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 392
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P TPWV
Sbjct: 393 ETGENITLNYDTSGVGQNGVATTH-MLPAATLTQYSRHYGQALPGYS--VPG--TPWVTP 447
Query: 290 QYVMPA-PHMSQVEVL 304
V A PHM QV+++
Sbjct: 448 YLVQTAPPHMQQVDMM 463
>gi|328784054|ref|XP_393384.4| PREDICTED: protein alan shepard-like [Apis mellifera]
Length = 554
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 220 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 279
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 280 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 339
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 340 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 397
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P TPWV
Sbjct: 398 ETGENMTLNYDTSGVGQNGVAATH-MLPAATLTQYSRHYGQALPGYS--VPG--TPWVTP 452
Query: 290 QYVMPA-PHMSQVEVL 304
V A PHM QV+++
Sbjct: 453 YLVQTAPPHMQQVDMM 468
>gi|380030450|ref|XP_003698861.1| PREDICTED: protein alan shepard-like [Apis florea]
Length = 551
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/256 (60%), Positives = 180/256 (70%), Gaps = 12/256 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 217 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 276
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 277 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 336
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 337 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 394
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P TPWV
Sbjct: 395 ETGENMTLNYDTSGVGQNGVAATH-MLPAATLTQYSRHYGQALPGYS--VPG--TPWVTP 449
Query: 290 QYVMPA-PHMSQVEVL 304
V A PHM QV+++
Sbjct: 450 YLVQTAPPHMQQVDMM 465
>gi|157115109|ref|XP_001658116.1| single-stranded DNA-binding protein mssp-1 [Aedes aegypti]
gi|108877020|gb|EAT41245.1| AAEL007091-PA, partial [Aedes aegypti]
Length = 412
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/290 (54%), Positives = 191/290 (65%), Gaps = 45/290 (15%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
TNN G TP EQLSKTNLYIRGL Q+TTDKDLINMC+QYG IISTKAILDKTTN
Sbjct: 38 TNNTM--GPSNTPQQTEQLSKTNLYIRGLQQNTTDKDLINMCAQYGTIISTKAILDKTTN 95
Query: 98 KCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLP 146
KC YGFVDFES A AVK LQ KGI AQMA+ QQEQDPTNLYIANLP
Sbjct: 96 KC--YGFVDFESPACAEGAVKGLQSKGIQAQMAKVGIWVLHRPAVQQEQDPTNLYIANLP 153
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
L +KE D+E+LL+KY V+STRILRD N SKGVGFAR+ES++KC+Q+IQ+FNG+ L G+
Sbjct: 154 LTYKETDVENLLSKYGQVISTRILRDQNAQSKGVGFARMESREKCEQIIQMFNGTQLQGA 213
Query: 207 KEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIP----- 261
KEPLLVKFAD G KK+ N ++ P R W RD A+ P+T P
Sbjct: 214 KEPLLVKFADGGSKKK-------NPFKSPDPNARTW-RDGAEG-----IPVTYDPNLQQN 260
Query: 262 ---------ATIQYQRFTAGPGGTGHIPAGYTPWVPTQYVMPAPHMSQVE 302
++ Y RF+A G+ +P + WVP+ Y+M P ++QV+
Sbjct: 261 GIGMNVGAHISMPYGRFSAPQVGSYAVPG--SQWVPSGYMMTQP-IAQVD 307
>gi|195587934|ref|XP_002083716.1| GD13207 [Drosophila simulans]
gi|251765070|sp|B4QRJ0.1|SHEP_DROSI RecName: Full=Protein alan shepard
gi|194195725|gb|EDX09301.1| GD13207 [Drosophila simulans]
Length = 576
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 174/244 (71%), Gaps = 24/244 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 228 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 285
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AVK LQ KG+ AQMA+QQEQDPTNLYIANLP +FKE DLE++L+KY VVSTRILRD
Sbjct: 286 AVKGLQGKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQM 345
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGP 235
SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+ N+++ P
Sbjct: 346 NSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-------NLFKTP 398
Query: 236 GAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGPGGTGHIPAGYT 284
R W SA+ +AY+ M TPI + Y RF+A G P +
Sbjct: 399 DPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA--PQVGGYPVAGS 454
Query: 285 PWVP 288
W+P
Sbjct: 455 QWIP 458
>gi|383861182|ref|XP_003706065.1| PREDICTED: protein alan shepard-like [Megachile rotundata]
Length = 405
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/257 (60%), Positives = 181/257 (70%), Gaps = 14/257 (5%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 70 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 129
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL KGI AQMA+QQEQDPTNLYIANLPL+FKE D+E LLA+Y V+STRILRD
Sbjct: 130 EGAVKALVAKGIQAQMAKQQEQDPTNLYIANLPLSFKENDVEGLLAQYGQVISTRILRDT 189
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+ I+R
Sbjct: 190 AGQSKGVGFARMESKEKCEQIIQMFNGKALQGAKDPLLVKFADGGNKKKSLYKS--TIWR 247
Query: 234 GPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGHIPAGYTPWVPT 289
G + L S Q +A H M P QY R A PG + +P PWV T
Sbjct: 248 ETGENMTLNYDTSGVGQNGVATTH-MLPTATLAQYGRHYGQALPGYS--VPGA--PWV-T 301
Query: 290 QYVMPA--PHMSQVEVL 304
Y++ PHM QV+++
Sbjct: 302 PYLVQTGPPHMQQVDMM 318
>gi|307185103|gb|EFN71298.1| RNA-binding motif, single-stranded-interacting protein 1
[Camponotus floridanus]
Length = 353
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/267 (58%), Positives = 182/267 (68%), Gaps = 23/267 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 16 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPMAA 75
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AVKAL KGI AQMA+ QQEQDPTNLYIANLPL FKE D+E+LLA+Y
Sbjct: 76 EGAVKALVAKGIQAQMAKVGIWLLRRLDSQQEQDPTNLYIANLPLTFKENDVEALLAQYG 135
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG LPG+K+PLLVKFAD G KK+
Sbjct: 136 QVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALPGAKDPLLVKFADGGNKKK 195
Query: 223 GAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGH 278
I+R G + L S Q +A H M P QY R A PG +
Sbjct: 196 SLFKS--TIWRETGENMTLNYDTSGVGQNGVAATH-MLPAATLTQYSRHYGQALPGYS-- 250
Query: 279 IPAGYTPWVPTQYVMPA-PHMSQVEVL 304
+P PWV V P+ PHM QV+++
Sbjct: 251 VPGA--PWVAPYLVHPSPPHMQQVDMI 275
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 119 ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR-ILRDNNNTS 177
+L + + Q A Q + TNLYI L N + DL ++ ++Y T+ ST+ IL N N
Sbjct: 4 SLSNNAMQGQQAEQLSK--TNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKC 61
Query: 178 KGVGFARLES 187
KG GF ES
Sbjct: 62 KGYGFVDFES 71
>gi|332025572|gb|EGI65735.1| Protein alan shepard [Acromyrmex echinatior]
Length = 382
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 183/267 (68%), Gaps = 23/267 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 45 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPMAA 104
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AVKAL KGI AQMA+ QQEQDPTNLYIANLPL FKE D+E+LLA+Y
Sbjct: 105 EGAVKALVAKGIQAQMAKVGIWLLRRLDSQQEQDPTNLYIANLPLTFKENDVEALLAQYG 164
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+
Sbjct: 165 QVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALTGAKDPLLVKFADGGNKKK 224
Query: 223 GAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGH 278
I+R G + L S Q +A H M P A QY R A PG +
Sbjct: 225 SLFKS--TIWRETGENMTLNYDTSGVGQNGVATTH-MLPTTALTQYSRHYSQALPGYS-- 279
Query: 279 IPAGYTPWVPTQYVMPA-PHMSQVEVL 304
+P TPWV V P+ PHM QV+++
Sbjct: 280 VPG--TPWVAPYLVHPSPPHMQQVDMI 304
>gi|307206990|gb|EFN84815.1| RNA-binding motif, single-stranded-interacting protein 1
[Harpegnathos saltator]
Length = 382
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/267 (58%), Positives = 182/267 (68%), Gaps = 23/267 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 45 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPLAA 104
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AVKAL KGI AQMA+ QQEQDPTNLYIANLPLNFKE D+E+LLA+Y
Sbjct: 105 EGAVKALVAKGIQAQMAKVGIWLLRRLDSQQEQDPTNLYIANLPLNFKENDVETLLAQYG 164
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLLVKFAD G KK+
Sbjct: 165 QVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALAGAKDPLLVKFADGGNKKK 224
Query: 223 GAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF--TAGPGGTGH 278
I+R G + L S Q +A H M P QY R A PG +
Sbjct: 225 SLFKS--TIWRETGENMTLNYDTSGVGQNGVAATH-MLPAATLTQYSRHYSQALPGYS-- 279
Query: 279 IPAGYTPWVPTQYVMPA-PHMSQVEVL 304
+P TPWV V A PHM QV+++
Sbjct: 280 VPG--TPWVAPYLVQTAPPHMQQVDMI 304
>gi|195127381|ref|XP_002008147.1| GI11982 [Drosophila mojavensis]
gi|251765068|sp|B4KX02.1|SHEP_DROMO RecName: Full=Protein alan shepard
gi|193919756|gb|EDW18623.1| GI11982 [Drosophila mojavensis]
Length = 592
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/269 (56%), Positives = 183/269 (68%), Gaps = 35/269 (13%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDLINMC+QYG IISTKAILDKTTNKC+GYGFVDFE YA
Sbjct: 226 LSKTNLYIRGLQQGTTDKDLINMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAEG 285
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP +FKE DLE++LAK+ V
Sbjct: 286 AVKGLQAKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLAKFGQV 345
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+ G+K+PLLVKFAD G KK+
Sbjct: 346 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTITGAKDPLLVKFADGGPKKK-- 403
Query: 225 GAGGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGP 273
N+++ P R W SA+ +AY+ M TPI + Y RF G
Sbjct: 404 -----NLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRF--GA 454
Query: 274 GGTGHIPAGYTPWVPTQYVMPAPHMSQVE 302
G P + W+P Y+M P ++QV+
Sbjct: 455 PQVGGYPVAGSQWIPG-YMMTQP-ITQVD 481
>gi|281365675|ref|NP_001163350.1| alan shepard, isoform E [Drosophila melanogaster]
gi|442630334|ref|NP_001261438.1| alan shepard, isoform G [Drosophila melanogaster]
gi|20151883|gb|AAM11301.1| RH63980p [Drosophila melanogaster]
gi|272455055|gb|ACZ94622.1| alan shepard, isoform E [Drosophila melanogaster]
gi|440215326|gb|AGB94133.1| alan shepard, isoform G [Drosophila melanogaster]
Length = 379
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 174/253 (68%), Gaps = 29/253 (11%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 77
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP +FKE DLE++L+KY V
Sbjct: 78 AVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQV 137
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+
Sbjct: 138 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-- 195
Query: 225 GAGGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM--------TPIPATIQYQRFTAGPGG 275
N+++ P R W SA+ +AY+ M P + Y RF+A
Sbjct: 196 -----NLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYSRFSA--PQ 248
Query: 276 TGHIPAGYTPWVP 288
G P + W+P
Sbjct: 249 VGGYPVAGSQWIP 261
>gi|345493906|ref|XP_003427178.1| PREDICTED: protein alan shepard-like isoform 2 [Nasonia
vitripennis]
Length = 579
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/264 (57%), Positives = 177/264 (67%), Gaps = 18/264 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 235 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 294
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AVKAL KGI AQMA+ QQEQDPTNLYIANLPL+FKE D+E LLA+Y
Sbjct: 295 EGAVKALVAKGIQAQMAKVGIWLIRRLASQQEQDPTNLYIANLPLSFKENDVEGLLAQYG 354
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G K+PLLVKFAD G KK+
Sbjct: 355 QVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALHGGKDPLLVKFADGGSKKK 414
Query: 223 GAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRFTAGPGGTGHIP 280
I+R G + L SA Q +A H M P QY R + ++P
Sbjct: 415 SLYKS--TIWRETGDNMTLNYDTSAVGQNGVATAH-MLPAATLAQYGRHYSQAMPGYNVP 471
Query: 281 AGYTPWVPTQYVMPAPHMSQVEVL 304
PWV V PHM QV+++
Sbjct: 472 GA--PWVTPYLVQTPPHMQQVDMM 493
>gi|345493908|ref|XP_003427179.1| PREDICTED: protein alan shepard-like isoform 3 [Nasonia
vitripennis]
Length = 577
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/271 (56%), Positives = 177/271 (65%), Gaps = 25/271 (9%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 235 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 294
Query: 114 LAAVKALQDKGIHAQMAR------------------QQEQDPTNLYIANLPLNFKECDLE 155
AVKAL KGI AQMA+ QQEQDPTNLYIANLPL+FKE D+E
Sbjct: 295 EGAVKALVAKGIQAQMAKVGIWLIRRLASVRWLCMQQQEQDPTNLYIANLPLSFKENDVE 354
Query: 156 SLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
LLA+Y V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G K+PLLVKFA
Sbjct: 355 GLLAQYGQVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALHGGKDPLLVKFA 414
Query: 216 DSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRFTAGP 273
D G KK+ I+R G + L SA Q +A H M P QY R +
Sbjct: 415 DGGSKKKSLYKS--TIWRETGDNMTLNYDTSAVGQNGVATAH-MLPAATLAQYGRHYSQA 471
Query: 274 GGTGHIPAGYTPWVPTQYVMPAPHMSQVEVL 304
++P PWV V PHM QV+++
Sbjct: 472 MPGYNVPGA--PWVTPYLVQTPPHMQQVDMM 500
>gi|442630336|ref|NP_001261439.1| alan shepard, isoform H [Drosophila melanogaster]
gi|440215327|gb|AGB94134.1| alan shepard, isoform H [Drosophila melanogaster]
Length = 371
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 172/251 (68%), Gaps = 27/251 (10%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 77
Query: 116 AVKALQDKGIHAQMAR---------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
AVK LQ KG+ AQMA+ EQDPTNLYIANLP +FKE DLE++L+KY VVS
Sbjct: 78 AVKGLQGKGVQAQMAKVGIWVLHRPAIEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVS 137
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA 226
TRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+
Sbjct: 138 TRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK---- 193
Query: 227 GGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM--------TPIPATIQYQRFTAGPGGTG 277
N+++ P R W SA+ +AY+ M P + Y RF+A G
Sbjct: 194 ---NLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYSRFSA--PQVG 248
Query: 278 HIPAGYTPWVP 288
P + W+P
Sbjct: 249 GYPVAGSQWIP 259
>gi|442630338|ref|NP_729057.3| alan shepard, isoform I [Drosophila melanogaster]
gi|440215328|gb|AAF50792.4| alan shepard, isoform I [Drosophila melanogaster]
Length = 377
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/251 (56%), Positives = 172/251 (68%), Gaps = 27/251 (10%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC+GYGFVDFE +A
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAFAEC 77
Query: 116 AVKALQDKGIHAQMAR---------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
AVK LQ KG+ AQMA+ EQDPTNLYIANLP +FKE DLE++L+KY VVS
Sbjct: 78 AVKGLQGKGVQAQMAKVGIWVLHRPAIEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVS 137
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA 226
TRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+
Sbjct: 138 TRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK---- 193
Query: 227 GGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM--------TPIPATIQYQRFTAGPGGTG 277
N+++ P R W SA+ +AY+ M P + Y RF+A G
Sbjct: 194 ---NLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPIGVPYSRFSA--PQVG 248
Query: 278 HIPAGYTPWVP 288
P + W+P
Sbjct: 249 GYPVAGSQWIP 259
>gi|328724646|ref|XP_001948737.2| PREDICTED: protein alan shepard-like [Acyrthosiphon pisum]
Length = 471
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 192/293 (65%), Gaps = 59/293 (20%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL Q+T DKDLI MCSQYG I+STKAILDK TNKC YGFVDFESG A
Sbjct: 109 QQLSKTNLYIRGLNQNTMDKDLITMCSQYGNIVSTKAILDKNTNKC--YGFVDFESGSCA 166
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AAVK LQ KG+ AQMA+ QQEQDPTNLYIANLP NFKE DL++LL+K+
Sbjct: 167 DAAVKGLQAKGVQAQMAKVGIPVQRRAATQQEQDPTNLYIANLPPNFKENDLDTLLSKFG 226
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
VVSTRILRD N SKGVGFAR++SK+KC+Q+IQ+FNG+ LPGSKEPLLVKFADSG KKR
Sbjct: 227 QVVSTRILRDTNMVSKGVGFARMDSKEKCEQIIQMFNGNPLPGSKEPLLVKFADSGQKKR 286
Query: 223 GAGAGGPNIYRGPGAEVRLWGRDSAD---------------SQLAYEHP----------- 256
YR ++ RLW R+S + S + YE
Sbjct: 287 NPS------YR---SDSRLW-RESENGGCVRFPVQHYMLQGSHVGYEAAHNGLTGAAGSH 336
Query: 257 MTPIPATIQY--QRFT--AGPGGTGHIPAGYTPWVPTQYVM-PAP--HMSQVE 302
+ P A QY + +T A P IPA + W+P QYVM PAP H++Q++
Sbjct: 337 VIPATALAQYVGRHYTTQALPAHGYSIPA--STWLP-QYVMQPAPPHHLAQID 386
>gi|345493910|ref|XP_003427180.1| PREDICTED: protein alan shepard-like isoform 4 [Nasonia
vitripennis]
Length = 575
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/269 (56%), Positives = 177/269 (65%), Gaps = 23/269 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL Q+TTDKDL+NMCSQYG I STKAILDK TNKC+GYGFVDFES A
Sbjct: 235 EQLSKTNLYIRGLNQNTTDKDLVNMCSQYGTITSTKAILDKNTNKCKGYGFVDFESPVAA 294
Query: 114 LAAVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AVKAL KGI AQMA+ QQEQDPTNLYIANLPL+FKE D+E LLA+Y
Sbjct: 295 EGAVKALVAKGIQAQMAKVGIWLIRRLASQQEQDPTNLYIANLPLSFKENDVEGLLAQYG 354
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G K+PLLVKFAD G KK+
Sbjct: 355 QVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALHGGKDPLLVKFADGGSKKK 414
Query: 223 GAGAGGPNIYRGPG-----AEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRFTAGPGG 275
I+R G + L SA Q +A H M P QY R +
Sbjct: 415 SLYKS--TIWRETGDVSNSQNMTLNYDTSAVGQNGVATAH-MLPAATLAQYGRHYSQAMP 471
Query: 276 TGHIPAGYTPWVPTQYVMPAPHMSQVEVL 304
++P PWV V PHM QV+++
Sbjct: 472 GYNVPGA--PWVTPYLVQTPPHMQQVDMM 498
>gi|270011336|gb|EFA07784.1| hypothetical protein TcasGA2_TC005341 [Tribolium castaneum]
Length = 501
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 173/251 (68%), Gaps = 18/251 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTDKDL+NMC Q+G IISTKAILDKTTNKC+GYGFVDFES A
Sbjct: 157 EQLSKTNLYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAA 216
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL I AQMA+QQEQDPTNLYIANLP +FKE DL++LL+KY V+STRILRD+
Sbjct: 217 EGAVKALTANNIQAQMAKQQEQDPTNLYIANLPSHFKESDLDNLLSKYGQVISTRILRDS 276
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG--LKKRGAGAGGPNI 231
SKGVGFAR+E+KDKC+Q+I +FNG+TL G KEPLLVKFAD G K +
Sbjct: 277 MGISKGVGFARMENKDKCEQIITIFNGNTLTGCKEPLLVKFADGGNKKKNMYKNNENAKM 336
Query: 232 YRGPGAEVRLWGRDS---ADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTP--- 285
+R + + G D A + +A +H IPA I R G AGY P
Sbjct: 337 WRDGTEGMAVAGYDPNTLAQNGVAAQH---MIPAAISNFRAPYGQY------AGYAPGAQ 387
Query: 286 WVPTQYVMPAP 296
WVP QYVMPAP
Sbjct: 388 WVP-QYVMPAP 397
>gi|189240575|ref|XP_974237.2| PREDICTED: similar to single-stranded DNA-binding protein mssp-1
[Tribolium castaneum]
Length = 524
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/251 (59%), Positives = 173/251 (68%), Gaps = 18/251 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTDKDL+NMC Q+G IISTKAILDKTTNKC+GYGFVDFES A
Sbjct: 174 EQLSKTNLYIRGLNPTTTDKDLVNMCQQFGTIISTKAILDKTTNKCKGYGFVDFESPSAA 233
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKAL I AQMA+QQEQDPTNLYIANLP +FKE DL++LL+KY V+STRILRD+
Sbjct: 234 EGAVKALTANNIQAQMAKQQEQDPTNLYIANLPSHFKESDLDNLLSKYGQVISTRILRDS 293
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG--LKKRGAGAGGPNI 231
SKGVGFAR+E+KDKC+Q+I +FNG+TL G KEPLLVKFAD G K +
Sbjct: 294 MGISKGVGFARMENKDKCEQIITIFNGNTLTGCKEPLLVKFADGGNKKKNMYKNNENAKM 353
Query: 232 YRGPGAEVRLWGRDS---ADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTP--- 285
+R + + G D A + +A +H IPA I R G AGY P
Sbjct: 354 WRDGTEGMAVAGYDPNTLAQNGVAAQH---MIPAAISNFRAPYGQY------AGYAPGAQ 404
Query: 286 WVPTQYVMPAP 296
WVP QYVMPAP
Sbjct: 405 WVP-QYVMPAP 414
>gi|24658237|ref|NP_729055.1| alan shepard, isoform B [Drosophila melanogaster]
gi|24658244|ref|NP_729056.1| alan shepard, isoform D [Drosophila melanogaster]
gi|23095748|gb|AAF50790.2| alan shepard, isoform B [Drosophila melanogaster]
gi|23095749|gb|AAN12240.1| alan shepard, isoform D [Drosophila melanogaster]
Length = 499
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 174/255 (68%), Gaps = 35/255 (13%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 133 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 190
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP +FKE DLE++L+KY V
Sbjct: 191 AVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQV 250
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+
Sbjct: 251 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-- 308
Query: 225 GAGGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGP 273
N+++ P R W SA+ +AY+ M TPI + Y RF+A
Sbjct: 309 -----NLFKTPDPNARAWRDVSAEGIPVAYDPTMQQNGVSVNVGTPI--GVPYSRFSA-- 359
Query: 274 GGTGHIPAGYTPWVP 288
G P + W+P
Sbjct: 360 PQVGGYPVAGSQWIP 374
>gi|251765114|sp|B3M3R5.2|SHEP_DROAN RecName: Full=Protein alan shepard
Length = 597
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 182/269 (67%), Gaps = 37/269 (13%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 233 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 290
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP ++KE DLE++L+KY V
Sbjct: 291 AVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHYKETDLEAMLSKYGQV 350
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG K+PLLVKFAD G KK+
Sbjct: 351 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGGKDPLLVKFADGGPKKK-- 408
Query: 225 GAGGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGP 273
N+++ P R W SA+ +AY+ + TPI + Y RF+A
Sbjct: 409 -----NLFKTPDPNARAWRDVSAEGIPVAYDPTLQQNGVSVNVGTPI--GVPYSRFSA-- 459
Query: 274 GGTGHIPAGYTPWVPTQYVMPAPHMSQVE 302
G P + W+P Y+M P ++QV+
Sbjct: 460 PQVGGYPVAGSQWIPG-YMMTQP-ITQVD 486
>gi|427786805|gb|JAA58854.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 402
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/260 (55%), Positives = 176/260 (67%), Gaps = 26/260 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYI+GLT TTDKDL+N+C+ YG IISTKAILDK TNKC+GYGFVDFES A
Sbjct: 65 DQLSKTNLYIKGLTHTTTDKDLLNLCAPYGNIISTKAILDKDTNKCKGYGFVDFESPLAA 124
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKALQ +G+ AQMA+QQEQDPTNLY+ANLPL E DLE LL + V+STRILRDN
Sbjct: 125 EKAVKALQAQGVQAQMAKQQEQDPTNLYMANLPLYMAEQDLEQLLQAHGAVISTRILRDN 184
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
+ S+GVGFAR+ESK+KC+Q+I FNG LPGSKEPLLVKFAD G KKR +Y+
Sbjct: 185 SAQSRGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFADGGNKKR-------TLYK 237
Query: 234 GPGAEVRLWGRD--------SADSQLAYEHPMTPIPATI------QYQRFTAGPGGTGHI 279
E R+W RD A SQ P+ +PA + Q + ++A T +
Sbjct: 238 --NHEHRMW-RDGEGLPYEQGALSQNGVGQPL--VPAALGGYQPAQQRGYSAAATPTAYA 292
Query: 280 PAGYTPWVPTQYVMPAPHMS 299
G P QY+M APH++
Sbjct: 293 LHGGAWMQPAQYIMQAPHLA 312
>gi|427786809|gb|JAA58856.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 365
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 175/260 (67%), Gaps = 26/260 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYI+GLT TTDKDL+N+C+ YG IISTKAILDK TNKC+GYGFVDFES A
Sbjct: 65 DQLSKTNLYIKGLTHTTTDKDLLNLCAPYGNIISTKAILDKDTNKCKGYGFVDFESPLAA 124
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKALQ +G+ AQMA+QQEQDPTNLY+ANLPL E DLE LL + V+STRILRDN
Sbjct: 125 EKAVKALQAQGVQAQMAKQQEQDPTNLYMANLPLYMAEQDLEQLLQAHGAVISTRILRDN 184
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
+ S+GVGFAR+ESK+KC+Q+I FNG LPGSKEPLLVKFAD G KKR +Y+
Sbjct: 185 SAQSRGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFADGGNKKR-------TLYK 237
Query: 234 GPGAEVRLWGRD--------SADSQLAYEHPMTPI------PATIQYQRFTAGPGGTGHI 279
E R+W RD A SQ P+ P PA Q + ++A T +
Sbjct: 238 --NHEHRMW-RDGEGLPYEQGALSQNGVGQPLVPAALGGYQPA--QQRGYSAAATPTAYA 292
Query: 280 PAGYTPWVPTQYVMPAPHMS 299
G P QY+M APH++
Sbjct: 293 LHGGAWMQPAQYIMQAPHLA 312
>gi|427786813|gb|JAA58858.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 341
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 175/260 (67%), Gaps = 26/260 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYI+GLT TTDKDL+N+C+ YG IISTKAILDK TNKC+GYGFVDFES A
Sbjct: 65 DQLSKTNLYIKGLTHTTTDKDLLNLCAPYGNIISTKAILDKDTNKCKGYGFVDFESPLAA 124
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AVKALQ +G+ AQMA+QQEQDPTNLY+ANLPL E DLE LL + V+STRILRDN
Sbjct: 125 EKAVKALQAQGVQAQMAKQQEQDPTNLYMANLPLYMAEQDLEQLLQAHGAVISTRILRDN 184
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
+ S+GVGFAR+ESK+KC+Q+I FNG LPGSKEPLLVKFAD G KKR +Y+
Sbjct: 185 SAQSRGVGFARMESKEKCEQIIATFNGKVLPGSKEPLLVKFADGGNKKR-------TLYK 237
Query: 234 GPGAEVRLWGRD--------SADSQLAYEHPMTPI------PATIQYQRFTAGPGGTGHI 279
E R+W RD A SQ P+ P PA Q + ++A T +
Sbjct: 238 --NHEHRMW-RDGEGLPYEQGALSQNGVGQPLVPAALGGYQPA--QQRGYSAAATPTAYA 292
Query: 280 PAGYTPWVPTQYVMPAPHMS 299
G P QY+M APH++
Sbjct: 293 LHGGAWMQPAQYIMQAPHLA 312
>gi|194750273|ref|XP_001957552.1| GF10470 [Drosophila ananassae]
gi|190624834|gb|EDV40358.1| GF10470 [Drosophila ananassae]
Length = 573
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/269 (54%), Positives = 182/269 (67%), Gaps = 37/269 (13%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 209 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 266
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP ++KE DLE++L+KY V
Sbjct: 267 AVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHYKETDLEAMLSKYGQV 326
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG K+PLLVKFAD G KK+
Sbjct: 327 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGGKDPLLVKFADGGPKKK-- 384
Query: 225 GAGGPNIYRGPGAEVRLWGRDSADS-QLAYEHPM----------TPIPATIQYQRFTAGP 273
N+++ P R W SA+ +AY+ + TPI + Y RF+A
Sbjct: 385 -----NLFKTPDPNARAWRDVSAEGIPVAYDPTLQQNGVSVNVGTPI--GVPYSRFSA-- 435
Query: 274 GGTGHIPAGYTPWVPTQYVMPAPHMSQVE 302
G P + W+P Y+M P ++QV+
Sbjct: 436 PQVGGYPVAGSQWIPG-YMMTQP-ITQVD 462
>gi|16768648|gb|AAL28543.1| HL01227p [Drosophila melanogaster]
Length = 322
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 151/198 (76%), Gaps = 20/198 (10%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 133 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 190
Query: 116 AVKALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AVK LQ KG+ AQMA+ QQEQDPTNLYIANLP +FKE DLE++L+KY V
Sbjct: 191 AVKGLQGKGVQAQMAKVGIWVLHRPAIQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQV 250
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
VSTRILRD SKGVGFAR+ES++KC+Q+IQ+FNG+T+PG+K+PLLVKFAD G KK+
Sbjct: 251 VSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKK-- 308
Query: 225 GAGGPNIYRGPGAEVRLW 242
N+++ P R W
Sbjct: 309 -----NLFKTPDPNARAW 321
>gi|357612546|gb|EHJ68054.1| hypothetical protein KGM_06271 [Danaus plexippus]
Length = 441
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/181 (67%), Positives = 145/181 (80%), Gaps = 11/181 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLS+TNLYIRGL+Q TTDKDL+ MC YG IISTKAILDK TNKC+GYGFVDFE+ A
Sbjct: 106 EQLSRTNLYIRGLSQTTTDKDLVQMCQMYGNIISTKAILDKNTNKCKGYGFVDFETIASA 165
Query: 114 LAAVKALQDKGIHAQMA-----------RQQEQDPTNLYIANLPLNFKECDLESLLAKYV 162
AAVK LQ KG+ AQMA RQQEQDPTNLY+ANLP +FKE D++ LLAK+
Sbjct: 166 EAAVKGLQAKGVQAQMAKVGIWFLRRLNRQQEQDPTNLYMANLPPHFKENDVDQLLAKFG 225
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
VVSTRILRD + SKGVGFAR+ES++KC+Q+IQ+FNG+ +PG+KEPLLVKFAD G KK+
Sbjct: 226 QVVSTRILRDTHGHSKGVGFARMESREKCEQIIQMFNGNPIPGAKEPLLVKFADGGNKKK 285
Query: 223 G 223
Sbjct: 286 A 286
>gi|242002762|ref|XP_002436024.1| RNA-binding protein precursor, putative [Ixodes scapularis]
gi|215499360|gb|EEC08854.1| RNA-binding protein precursor, putative [Ixodes scapularis]
Length = 201
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 144/186 (77%), Gaps = 9/186 (4%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S + +G EQLSKTNLYI+GLT TTDKDL+N+C+ YG IISTKAILDK TNKC+GYGFV
Sbjct: 1 SASSSSGGEQLSKTNLYIKGLTHTTTDKDLLNLCAPYGNIISTKAILDKDTNKCKGYGFV 60
Query: 106 DFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVV 165
DFES A AVKALQ +G+ AQMA+QQEQDPTNLYIANLPL E DLE +L+ + V+
Sbjct: 61 DFESPLAAEKAVKALQAQGVQAQMAKQQEQDPTNLYIANLPLYMVEQDLEQMLSNHGNVI 120
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP---------GSKEPLLVKFAD 216
STRILRDNN+ S+GVGFAR+ESK+KC+ +I FN LP GSKEPLLVKFAD
Sbjct: 121 STRILRDNNSQSRGVGFARMESKEKCEHIIATFNTKVLPGQCALTLLAGSKEPLLVKFAD 180
Query: 217 SGLKKR 222
G KKR
Sbjct: 181 GGNKKR 186
>gi|405965429|gb|EKC30805.1| RNA-binding motif, single-stranded-interacting protein 3
[Crassostrea gigas]
Length = 336
Score = 246 bits (628), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/253 (55%), Positives = 167/253 (66%), Gaps = 12/253 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLS+TNLYIRGL +TTDKDL+N+C YG IISTKAI+D+ TNKC+GYGFVDFES A
Sbjct: 21 EQLSRTNLYIRGLNPNTTDKDLVNLCQPYGKIISTKAIIDQQTNKCKGYGFVDFESPSAA 80
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV+ALQ +GI AQMA+QQEQDPTNLYIANLP+ F E +LE++ Y TV+STRILR
Sbjct: 81 EVAVQALQSQGIQAQMAKQQEQDPTNLYIANLPIYFAETNLENMFKDYGTVISTRILRKP 140
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYR 233
+ S+GVGF+R+ESK+KC+++I FNG LPG EPLLVKFAD G KK+ A P I R
Sbjct: 141 DGISRGVGFSRMESKEKCERIIDQFNGKILPGCTEPLLVKFADGGNKKKTA---IPQI-R 196
Query: 234 GPGAEVRLWGRDSADSQLAYEHPM-TPIPATIQYQRFTAGPGGTG----HIPAGYTPWVP 288
A+ L G D + S AY M P A Y G G PAG T +P
Sbjct: 197 NELAQ-SLVGLDKSGSLQAYFQQMGDPSLALAAYADQALATNGVGTPALMTPAGLT--LP 253
Query: 289 TQYVMPAPHMSQV 301
V PH QV
Sbjct: 254 RYTVATTPHTYQV 266
>gi|443707253|gb|ELU02931.1| hypothetical protein CAPTEDRAFT_154976 [Capitella teleta]
Length = 417
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 168/274 (61%), Gaps = 29/274 (10%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGLTQ+TTDKDL N+C QYG IISTKAI+D+TTNKC+GYGFVDF+S
Sbjct: 103 GSEQLSKTNLYIRGLTQNTTDKDLENLCKQYGKIISTKAIIDQTTNKCKGYGFVDFDSLQ 162
Query: 112 YALAAVKALQDKGIHAQMAR----------------------QQEQDPTNLYIANLPLNF 149
A AV+ALQ +G+ AQMA+ QQEQDPTNLYIANLP+
Sbjct: 163 AAEIAVRALQQQGVQAQMAKVSIVPLLCICNCAQQHHVSVSQQQEQDPTNLYIANLPVYM 222
Query: 150 KECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
E +LE + + + V+STRILRDN S+GVGFAR+ESKDKC+Q+IQ FNG +PG EP
Sbjct: 223 TETNLEEMFSPFGQVISTRILRDNQGHSRGVGFARMESKDKCEQIIQTFNGQKIPGHMEP 282
Query: 210 LLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRF 269
L VK ADSG K+R P I R G +L G + D P P +I +
Sbjct: 283 LTVKLADSGNKRRNQ-QQRPWIDRQQGDMFQLTGLSAYDQANGGVTPQGMTPPSIMPRYA 341
Query: 270 TAGPGGTGHIPAGYTPWV---PTQYVMPAPHMSQ 300
T P + I G W+ P Y+M HM Q
Sbjct: 342 THTPVTSYQIQGGAN-WLTQPPAPYIM--QHMPQ 372
>gi|291234240|ref|XP_002737057.1| PREDICTED: RNA binding motif, single stranded interacting protein
1-like [Saccoglossus kowalevskii]
Length = 573
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 153/225 (68%), Gaps = 26/225 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG------------ 101
EQLSKTNLYIR L +TTD+DL NMC YG I+S KAILDK+TNKC+G
Sbjct: 190 EQLSKTNLYIRRLPPNTTDQDLQNMCLPYGKIVSVKAILDKSTNKCKGSNMSIVSDEFLS 249
Query: 102 ----YGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESL 157
YGFVDF+S G A AV+ALQ +GI AQMA+QQEQDPTNLY++NLP++ E DLESL
Sbjct: 250 FFQGYGFVDFDSHGAAQKAVQALQQQGIEAQMAKQQEQDPTNLYLSNLPIHMDEKDLESL 309
Query: 158 LAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L+ Y V+STRILRD N S+GVGFAR+ESK+KC+ +I FNG+ LPG EPLL KFAD
Sbjct: 310 LSPYGQVISTRILRDCQTNMSRGVGFARMESKEKCEHIITKFNGNYLPGQLEPLLCKFAD 369
Query: 217 SGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIP 261
G+KKR N Y E+R W RD + Y+ +P+P
Sbjct: 370 GGVKKR-------NQYNKQQQEMRQWQRDGETAVALYDQ--SPLP 405
>gi|321474919|gb|EFX85883.1| hypothetical protein DAPPUDRAFT_4034 [Daphnia pulex]
Length = 194
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 138/169 (81%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLS+TNLYIRGLT +TTDKDL +C ++G IISTKAILDK TNKC+GYGFVDF+S A
Sbjct: 1 DQLSRTNLYIRGLTPNTTDKDLEELCRKFGTIISTKAILDKNTNKCKGYGFVDFDSPSAA 60
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
+AVKALQ +GI AQMA+QQEQDPTNLY+ANLP + E DL +L KY TV+STR+LRD
Sbjct: 61 ESAVKALQLQGIQAQMAKQQEQDPTNLYLANLPAHITEQDLHDMLYKYGTVISTRVLRDG 120
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
+ S+GVGFAR+ES++KCD++I +FNG L GS +PLLVKFAD G K +
Sbjct: 121 GSQSRGVGFARMESREKCDEIISIFNGKLLSGSTQPLLVKFADGGNKNK 169
>gi|390345417|ref|XP_791446.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 2 [Strongylocentrotus purpuratus]
Length = 454
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/248 (53%), Positives = 163/248 (65%), Gaps = 18/248 (7%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL +TTD DL+N+C QYG I+STKAILDK T +C+GYGFVDF++
Sbjct: 116 GNEQLSKTNLYIRGLPANTTDLDLVNLCKQYGNIVSTKAILDKETKQCKGYGFVDFDNAL 175
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A A K LQ+K I AQMA+QQEQDPTNLYI+NLP N E LES+L+ V+STRILR
Sbjct: 176 SAQKATKDLQEKNILAQMAKQQEQDPTNLYISNLPHNIDEKALESMLSPIGHVISTRILR 235
Query: 172 D-NNNTSKGVGFARLESKDKCDQMIQLFNGSTL-PGSKEPLLVKFADSGLKKRGA-GAGG 228
D + S+GVGFAR+ESK+KC+++I+ FNG TL P +EPLL KFAD G+KKR G
Sbjct: 236 DTTTHDSRGVGFARMESKEKCEEVIRRFNGVTLDPSQQEPLLCKFADGGVKKRNQINKQG 295
Query: 229 PNIYRGPGAEVRLWGRDSADSQLAYEH-------PMTPIPATIQYQRFTAGPGGT-GHIP 280
RGP + GR + L YE PM +P + + G G T +P
Sbjct: 296 ----RGPQSATNWMGRPTEAGALTYESLYARNGVPM--MPHQLSAAAYNLGGGVTYASLP 349
Query: 281 AGYTP-WV 287
A TP W+
Sbjct: 350 AASTPQWI 357
>gi|195540047|gb|AAI67880.1| LOC100036596 protein [Xenopus (Silurana) tropicalis]
Length = 399
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 137/175 (78%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL+ +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 50 DQLSKTNLYIRGLSPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 109
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LES+L + V+STRILRD+
Sbjct: 110 QKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELESMLKPFGQVISTRILRDS 169
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG TLPG EPLL KFAD G KKR
Sbjct: 170 SGTSRGVGFARMESTEKCEAVISHFNGKFIKTLPGVSAPAEPLLCKFADGGQKKR 224
>gi|301610019|ref|XP_002934573.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Xenopus (Silurana) tropicalis]
Length = 389
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 141/197 (71%), Gaps = 13/197 (6%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S G A
Sbjct: 47 QLSKTNLYIRGLHPSTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPGAAQ 106
Query: 115 AAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNN 174
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LESLL + V+STRILRD +
Sbjct: 107 KAVTALKASGVQAQMAKQQEQDPTNLYISNLPVSMDEQELESLLKPFGQVISTRILRDAS 166
Query: 175 NTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAGG 228
TS+GVGFAR+ES +KC+ +I FNG + P +EPLL KFAD G KKR G
Sbjct: 167 GTSRGVGFARMESTEKCEAVISHFNGKYIKTPPGVPAPQEPLLCKFADGGQKKR--QTQG 224
Query: 229 PNIYRGPGAEVRLWGRD 245
I G R WGR+
Sbjct: 225 KYIQNG-----RGWGRE 236
>gi|148224229|ref|NP_001090632.1| RNA binding motif, single stranded interacting protein 1 [Xenopus
(Silurana) tropicalis]
gi|113197750|gb|AAI21676.1| LOC100036596 protein [Xenopus (Silurana) tropicalis]
Length = 406
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 137/175 (78%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL+ +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 57 DQLSKTNLYIRGLSPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 116
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LES+L + V+STRILRD+
Sbjct: 117 QKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELESMLKPFGQVISTRILRDS 176
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG TLPG EPLL KFAD G KKR
Sbjct: 177 SGTSRGVGFARMESTEKCEAVISHFNGKFIKTLPGVSAPAEPLLCKFADGGQKKR 231
>gi|322800388|gb|EFZ21392.1| hypothetical protein SINV_06805 [Solenopsis invicta]
Length = 352
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/278 (52%), Positives = 170/278 (61%), Gaps = 46/278 (16%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQ--YGPIISTKAILDKTTNKCRGYGFVDFESGG 111
EQLSKTNLYIRGL Q+TTDKDL+NMCSQ Y P + GYGFVDFES
Sbjct: 16 EQLSKTNLYIRGLNQNTTDKDLVNMCSQDLYRP------------DYIAGYGFVDFESPM 63
Query: 112 YALAAVKALQDKGIHAQMA--------------------RQQEQDPTNLYIANLPLNFKE 151
A AVKAL KGI AQMA RQQEQDPTNLYIANLPL FKE
Sbjct: 64 AAEGAVKALVAKGIQAQMAKVGIWLLRRLDSVRGCACKYRQQEQDPTNLYIANLPLTFKE 123
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
D+E+LLA+Y V+STRILRD + SKGVGFAR+ESK+KC+Q+IQ+FNG L G+K+PLL
Sbjct: 124 NDVEALLAQYGQVISTRILRDTSGQSKGVGFARMESKEKCEQIIQMFNGKALTGAKDPLL 183
Query: 212 VKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQ--LAYEHPMTPIPATIQYQRF 269
VKFAD G KK+ I+R G + L S Q +A H M P A QY R
Sbjct: 184 VKFADGGNKKKSLFKS--TIWRETGENMTLNYDTSGVGQNGVATTH-MLPATALTQYSRH 240
Query: 270 --TAGPGGTGHIPAGYTPWVPTQYVMPA-PHMSQVEVL 304
A PG + +P TPWV V P+ PHM QV+++
Sbjct: 241 YSQALPGYS--VPG--TPWVAPYLVHPSPPHMQQVDMI 274
>gi|47229541|emb|CAG06737.1| unnamed protein product [Tetraodon nigroviridis]
Length = 412
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 143/198 (72%), Gaps = 13/198 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAIL+KTTNKC+GYGFVDF+S A
Sbjct: 53 EQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILEKTTNKCKGYGFVDFDSPAAA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LES+L + V+STRILRD
Sbjct: 113 QKAVTALKSSGVQAQMAKQQEQDPTNLYISNLPVSMDEQELESMLKSFGQVISTRILRDA 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKRGAGAG 227
N TS+GVGFAR+ES +KC+ +IQ FNG TLPG EPLL KFAD G KKR
Sbjct: 173 NGTSRGVGFARMESTEKCEAIIQHFNGKFIKTLPGVPVPTEPLLCKFADGGQKKR--QNQ 230
Query: 228 GPNIYRGPGAEVRLWGRD 245
G + G R WGRD
Sbjct: 231 GKYLQNG-----RPWGRD 243
>gi|348507665|ref|XP_003441376.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Oreochromis niloticus]
Length = 391
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 134/177 (75%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 43 GGEQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 102
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LES+L + V+STRILR
Sbjct: 103 AAQKAVTALKSTGVQAQMAKQQEQDPTNLYISNLPVSMDEQELESMLKSFGQVISTRILR 162
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D N TS+GVGFAR+ES +KC+ +IQ FNG + P EPLL KFAD G KKR
Sbjct: 163 DANGTSRGVGFARMESTEKCEAIIQHFNGKFIKTPPGVPVPTEPLLCKFADGGQKKR 219
>gi|432859917|ref|XP_004069300.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Oryzias latipes]
Length = 461
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 150/220 (68%), Gaps = 21/220 (9%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 115 EQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 174
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LES+L + V+STRILRD
Sbjct: 175 QKAVTALKSSGVQAQMAKQQEQDPTNLYISNLPVSMDEQELESMLKPFGQVISTRILRDA 234
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
N TS+GVGFAR+ES +KC+ +IQ FNG + P EPLL KFAD G KKR +
Sbjct: 235 NGTSRGVGFARMESTEKCEAIIQHFNGKFIKTPPGVPAPTEPLLCKFADGGQKKR--QSQ 292
Query: 228 GPNIYRGPGAEVRLWGR--DSADSQLAYEHPMTPIPATIQ 265
G + G R W R D+ LAY+ PA +Q
Sbjct: 293 GKYLQNG-----RPWVRDGDTGGMTLAYD------PAALQ 321
>gi|395846669|ref|XP_003796023.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Otolemur garnettii]
Length = 389
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L Y V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPYGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D+N TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSNGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|410919457|ref|XP_003973201.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Takifugu rubripes]
Length = 398
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 145/209 (69%), Gaps = 15/209 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 53 EQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LES+L + V+STRILRD
Sbjct: 113 QKAVTALKSTGVQAQMAKQQEQDPTNLYISNLPVSMDEQELESMLKSFGQVISTRILRDA 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
N TS+GVGFAR+ES +KC+ +IQ FNG + P EPLL KFAD G KKR
Sbjct: 173 NGTSRGVGFARMESTEKCEAIIQHFNGKFIKTPPGVPVPTEPLLCKFADGGQKKR--QNQ 230
Query: 228 GPNIYRGPGAEVRLWGR--DSADSQLAYE 254
G + G R W R D+ LAY+
Sbjct: 231 GKYLQNG-----RPWARDGDAGGMTLAYD 254
>gi|410897052|ref|XP_003962013.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Takifugu rubripes]
Length = 397
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 146/207 (70%), Gaps = 14/207 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL+ TTD DL+ +C +G I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 50 GWDQLSKTNLYIRGLSPSTTDHDLVKLCQPFGKIVSTKAILDKTTNKCKGYGFVDFDSPS 109
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV L+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 110 AAQKAVTTLKSTGIQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKHFGQVISTRILR 169
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D + S+GVGFAR+ES +KCD +I FNG + P EPLL KFAD G KKR +
Sbjct: 170 DFSGHSRGVGFARMESTEKCDAVISHFNGKFIKTPAGVPAPAEPLLCKFADGGQKKRQSQ 229
Query: 226 AGGPNIYRGPGAEVRLWGRDSADSQLA 252
N + G R WGRDS DS+LA
Sbjct: 230 ----NKFSQNG---RGWGRDS-DSRLA 248
>gi|326671515|ref|XP_687432.5| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Danio rerio]
Length = 395
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 141/199 (70%), Gaps = 13/199 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 49 EQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 108
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 109 QKAVTALKSTGVQAQMAKQQEQDPTNLYISNLPVSMDEQELEAMLKSFGQVISTRILRDA 168
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
N TS+GVGFAR+ES +KC+ +IQ FNG + P EPLL KFAD G KKR
Sbjct: 169 NGTSRGVGFARMESTEKCEAIIQHFNGKYIKTPPGVPVPTEPLLCKFADGGQKKR----Q 224
Query: 228 GPNIYRGPGAEVRLWGRDS 246
N Y G R W RD+
Sbjct: 225 NQNKYLQNG---RSWTRDA 240
>gi|57525954|ref|NP_001003541.1| RNA-binding motif, single-stranded-interacting protein 2 [Danio
rerio]
gi|50369685|gb|AAH76435.1| Zgc:100836 [Danio rerio]
Length = 400
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 134/175 (76%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 53 DQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPASA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LES+L + V+STRILRD
Sbjct: 113 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELESMLKPFSQVISTRILRDA 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKR 222
N TS+GVGFAR+ES +KC+ +IQ FNG T PG EPLL KFAD G KKR
Sbjct: 173 NGTSRGVGFARMESTEKCEAIIQHFNGKYIKTPPGVAVPTEPLLCKFADGGQKKR 227
>gi|390345419|ref|XP_003726328.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 1 [Strongylocentrotus purpuratus]
Length = 410
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/250 (52%), Positives = 163/250 (65%), Gaps = 20/250 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL +TTD DL+N+C QYG I+STKAILDK T +C+GYGFVDF++
Sbjct: 67 GNEQLSKTNLYIRGLPANTTDLDLVNLCKQYGNIVSTKAILDKETKQCKGYGFVDFDNAL 126
Query: 112 YALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
A A K LQ+K I AQMA+ QQEQDPTNLYI+NLP N E LES+L+ V+STRI
Sbjct: 127 SAQKATKDLQEKNILAQMAKLQQQEQDPTNLYISNLPHNIDEKALESMLSPIGHVISTRI 186
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTL-PGSKEPLLVKFADSGLKKRG-AGA 226
LRD + S+GVGFAR+ESK+KC+++I+ FNG TL P +EPLL KFAD G+KKR
Sbjct: 187 LRDTTTHDSRGVGFARMESKEKCEEVIRRFNGVTLDPSQQEPLLCKFADGGVKKRNQINK 246
Query: 227 GGPNIYRGPGAEVRLWGRDSADSQLAYEH-------PMTPIPATIQYQRFTAGPGGT-GH 278
G RGP + GR + L YE PM +P + + G G T
Sbjct: 247 QG----RGPQSATNWMGRPTEAGALTYESLYARNGVPM--MPHQLSAAAYNLGGGVTYAS 300
Query: 279 IPAGYTP-WV 287
+PA TP W+
Sbjct: 301 LPAASTPQWI 310
>gi|47226367|emb|CAG09335.1| unnamed protein product [Tetraodon nigroviridis]
Length = 374
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 142/199 (71%), Gaps = 13/199 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL+ TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 52 DQLSKTNLYIRGLSPSTTDHDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAA 111
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILRD+
Sbjct: 112 QKAVTALKSTGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKHFGQVISTRILRDS 171
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
+ S+GVGFAR+ES +KC+ +I FNG + P EPLL KFAD G KKR +
Sbjct: 172 SGHSRGVGFARMESTEKCEAVISHFNGKFIKTPAGVPAPAEPLLCKFADGGQKKRQSQ-- 229
Query: 228 GPNIYRGPGAEVRLWGRDS 246
N + G R WGRDS
Sbjct: 230 --NKFSQNG---RGWGRDS 243
>gi|348585929|ref|XP_003478723.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Cavia porcellus]
Length = 403
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L Y V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPYGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|148226306|ref|NP_001080407.1| RNA binding motif, single stranded interacting protein 1 [Xenopus
laevis]
gi|27695126|gb|AAH43623.1| Rbms1-prov protein [Xenopus laevis]
Length = 374
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL+ +TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 23 GWDQLSKTNLYIRGLSPNTTDLDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 82
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LES+L + V+STRILR
Sbjct: 83 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELESMLKPFGQVISTRILR 142
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG LPG EPLL KFAD G KKR
Sbjct: 143 DSSGTSRGVGFARMESTEKCEAVISHFNGKFIKPLPGVSAPAEPLLCKFADGGQKKR 199
>gi|348521424|ref|XP_003448226.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Oreochromis niloticus]
Length = 409
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 142/198 (71%), Gaps = 13/198 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 63 EQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPASA 122
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + +STRILRD
Sbjct: 123 QKAVTALKAGGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFSQAISTRILRDA 182
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAGAG 227
N TS+GVGFAR+ES +KC+ +IQ FNG T PG + EPLL KFAD G KKR +
Sbjct: 183 NGTSRGVGFARMESTEKCEAIIQHFNGKYIKTPPGVQAPSEPLLCKFADGGQKKR--QSQ 240
Query: 228 GPNIYRGPGAEVRLWGRD 245
G + G R W RD
Sbjct: 241 GKYLQNG-----RPWTRD 253
>gi|189524950|ref|XP_693395.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Danio rerio]
Length = 395
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 142/201 (70%), Gaps = 13/201 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 50 GWEQLSKTNLYIRGLPPGTTDHDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPV 109
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLY++NLP++ E +LE+LL + VVSTRILR
Sbjct: 110 SAQKAVAALKTNGVQAQMAKQQEQDPTNLYLSNLPVSMDEQELENLLKPFGQVVSTRILR 169
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKEPLLVKFADSGLKKRGAG 225
D N S+GVGFAR+ES +KCD +I FNG S + G+ EPLL KFAD G KKR +
Sbjct: 170 DTNGMSRGVGFARMESTEKCDAVISHFNGKFIKSSSGMLGASEPLLCKFADGGQKKRQSQ 229
Query: 226 AGGPNIYRGPGAEVRLWGRDS 246
A I G R W RD+
Sbjct: 230 AK--YIPNG-----RTWTRDA 243
>gi|281348070|gb|EFB23654.1| hypothetical protein PANDA_019121 [Ailuropoda melanoleuca]
Length = 383
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 32 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 91
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 92 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 151
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 152 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 208
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 209 -QNPNKYIPNG---RPWHRE 224
>gi|301787247|ref|XP_002929039.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Ailuropoda melanoleuca]
Length = 405
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 57 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 116
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 117 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 176
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 177 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 233
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 234 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 266
>gi|115529305|ref|NP_001070184.1| RNA-binding motif, single-stranded-interacting protein 3 [Danio
rerio]
gi|115313355|gb|AAI24430.1| RNA binding motif, single stranded interacting protein [Danio
rerio]
Length = 381
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 161/262 (61%), Gaps = 30/262 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 17 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 76
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 77 QKAVASLKASGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDA 136
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
N S+GVGFAR+ES +KCD +IQ FNG L P EPLL KFAD G KKR + +
Sbjct: 137 NGVSRGVGFARMESTEKCDVVIQHFNGKFLKTPPGVPAPTEPLLCKFADGGQKKRQSQSK 196
Query: 228 GPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPI-------PATIQYQRFTAGPGGTGHIP 280
P R W R+ +S +A + T + P +I R A T I
Sbjct: 197 YPQ-------NGRPWPRE-GESGMALTYDPTAMQNGFYSSPYSISTNRMIAQTSITPFIA 248
Query: 281 AG--------YTPWVP-TQYVM 293
A T W+P QYVM
Sbjct: 249 ASPVSTYQVQSTSWMPHQQYVM 270
>gi|327283354|ref|XP_003226406.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Anolis carolinensis]
Length = 404
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 57 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 116
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 117 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 176
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D+N TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 177 DSNGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR 233
>gi|348585931|ref|XP_003478724.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 2 [Cavia porcellus]
Length = 356
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L Y V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPYGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|344268402|ref|XP_003406049.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Loxodonta africana]
Length = 446
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 98 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 157
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 158 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 217
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 218 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 274
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 275 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 307
>gi|78369252|ref|NP_001030438.1| RNA-binding motif, single-stranded-interacting protein 1 [Bos
taurus]
gi|122143021|sp|Q3ZBP3.1|RBMS1_BOVIN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1
gi|73586813|gb|AAI03187.1| RNA binding motif, single stranded interacting protein 1 [Bos
taurus]
gi|296490570|tpg|DAA32683.1| TPA: RNA-binding motif, single-stranded-interacting protein 1 [Bos
taurus]
Length = 403
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|402888463|ref|XP_003907580.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Papio anubis]
gi|384944040|gb|AFI35625.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c
[Macaca mulatta]
Length = 403
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|410905073|ref|XP_003966016.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Takifugu rubripes]
Length = 426
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 133/262 (50%), Positives = 160/262 (61%), Gaps = 30/262 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 60 EQLSKTNLYIRGLLPATTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 119
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILRD
Sbjct: 120 QKAVASLKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGHVISTRILRDA 179
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL---PG---SKEPLLVKFADSGLKKRGAGAG 227
N S+GVGFAR+ES +KCD +IQ FNG L PG EPLL KFAD G KKR
Sbjct: 180 NGHSRGVGFARMESTEKCDVVIQNFNGKFLKTPPGMTAPAEPLLCKFADGGQKKRQTQVK 239
Query: 228 GPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPI-------PATIQYQRFTAGPGGTGHIP 280
P R W RD +S +A + T + P +I R A T I
Sbjct: 240 YPQ-------NGRPWTRD-GESGMALTYDPTAMQNGFYSSPYSISTNRMIAQASITPFIA 291
Query: 281 AG--------YTPWVP-TQYVM 293
A T W+P QYVM
Sbjct: 292 ASPVSTYQVQSTSWMPHQQYVM 313
>gi|440904825|gb|ELR55286.1| RNA-binding motif, single-stranded-interacting protein 1, partial
[Bos grunniens mutus]
Length = 382
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 31 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 90
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 150
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 151 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 207
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 208 -QNPNKYIPNG---RPWHRE 223
>gi|432865278|ref|XP_004070504.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like isoform 1 [Oryzias latipes]
Length = 407
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 147/208 (70%), Gaps = 15/208 (7%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NGS T G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYG
Sbjct: 53 NGS--TNYGGEQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYG 110
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVT 163
FVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L +
Sbjct: 111 FVDFDSPASAQKAVTALKAGGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFSQ 170
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADS 217
+STRILRD + TS+GVGFAR+ES +KC+ +IQ FNG T PG + EPLL KFAD
Sbjct: 171 AISTRILRDASGTSRGVGFARMESTEKCEAIIQHFNGKFIKTPPGVQGPPEPLLCKFADG 230
Query: 218 GLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
G KKR + G + G R W RD
Sbjct: 231 GQKKR--QSQGKYLQSG-----RPWTRD 251
>gi|291391615|ref|XP_002712257.1| PREDICTED: RNA binding motif, single stranded interacting protein 1
[Oryctolagus cuniculus]
Length = 356
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RAWHRE 214
>gi|402888465|ref|XP_003907581.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Papio anubis]
Length = 419
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|395732396|ref|XP_002812563.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Pongo abelii]
Length = 403
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 151/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGIQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|384944038|gb|AFI35624.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a
[Macaca mulatta]
Length = 406
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|351711948|gb|EHB14867.1| RNA-binding motif, single-stranded-interacting protein 1, partial
[Heterocephalus glaber]
Length = 382
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 31 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 90
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 150
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 151 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 207
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 208 -QNPNKYIPNG---RPWHRE 223
>gi|410968720|ref|XP_003990849.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Felis catus]
Length = 389
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELETMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|355564921|gb|EHH21410.1| hypothetical protein EGK_04471, partial [Macaca mulatta]
gi|355750567|gb|EHH54894.1| hypothetical protein EGM_03996, partial [Macaca fascicularis]
Length = 382
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 31 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 90
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 150
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 151 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 207
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 208 -QNPNKYIPNG---RPWHRE 223
>gi|395732398|ref|XP_003776061.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Pongo abelii]
Length = 419
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 151/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGIQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|350593521|ref|XP_003133475.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Sus scrofa]
Length = 403
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|426221033|ref|XP_004004716.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Ovis aries]
Length = 406
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|432865280|ref|XP_004070505.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like isoform 2 [Oryzias latipes]
Length = 415
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/208 (58%), Positives = 147/208 (70%), Gaps = 15/208 (7%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NGS T G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYG
Sbjct: 52 NGS--TNYGGEQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYG 109
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVT 163
FVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L +
Sbjct: 110 FVDFDSPASAQKAVTALKAGGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFSQ 169
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADS 217
+STRILRD + TS+GVGFAR+ES +KC+ +IQ FNG T PG + EPLL KFAD
Sbjct: 170 AISTRILRDASGTSRGVGFARMESTEKCEAIIQHFNGKFIKTPPGVQGPPEPLLCKFADG 229
Query: 218 GLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
G KKR + G + G R W RD
Sbjct: 230 GQKKR--QSQGKYLQSG-----RPWTRD 250
>gi|297264157|ref|XP_001091917.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Macaca mulatta]
Length = 422
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|417400377|gb|JAA47138.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 406
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|194222257|ref|XP_001493156.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Equus caballus]
Length = 389
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|395732394|ref|XP_003776060.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Pongo abelii]
Length = 389
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGIQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|354476555|ref|XP_003500490.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Cricetulus griseus]
Length = 403
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|4506447|ref|NP_002888.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c
[Homo sapiens]
gi|332234023|ref|XP_003266207.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Nomascus leucogenys]
gi|332814558|ref|XP_515853.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Pan troglodytes]
gi|558529|dbj|BAA05841.1| SCR2 [Homo sapiens]
gi|15278081|gb|AAH12992.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|15278086|gb|AAH12993.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|410222060|gb|JAA08249.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410338641|gb|JAA38267.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
Length = 403
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 151/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|345797246|ref|XP_535930.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Canis lupus familiaris]
Length = 389
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|332234027|ref|XP_003266209.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 4 [Nomascus leucogenys]
Length = 370
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 151/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 199 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 231
>gi|344245476|gb|EGW01580.1| RNA-binding motif, single-stranded-interacting protein 1
[Cricetulus griseus]
Length = 419
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|332234025|ref|XP_003266208.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Nomascus leucogenys]
gi|332814560|ref|XP_003309323.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Pan troglodytes]
gi|194387572|dbj|BAG60150.1| unnamed protein product [Homo sapiens]
Length = 419
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 151/221 (68%), Gaps = 18/221 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 232 -QNPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 264
>gi|8400718|ref|NP_058520.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a
[Homo sapiens]
gi|55977783|sp|P29558.3|RBMS1_HUMAN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1; AltName: Full=Single-stranded DNA-binding
protein MSSP-1; AltName: Full=Suppressor of CDC2 with
RNA-binding motif 2
gi|17511979|gb|AAH18951.1| RNA binding motif, single stranded interacting protein 1 [Homo
sapiens]
gi|312152474|gb|ADQ32749.1| RNA binding motif, single stranded interacting protein 1 [synthetic
construct]
gi|410222062|gb|JAA08250.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410296208|gb|JAA26704.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
gi|410338639|gb|JAA38266.1| RNA binding motif, single stranded interacting protein 1 [Pan
troglodytes]
Length = 406
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWHRE 247
>gi|156408012|ref|XP_001641651.1| predicted protein [Nematostella vectensis]
gi|156228790|gb|EDO49588.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 140/197 (71%), Gaps = 15/197 (7%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG E+LSKTNLYIRGL +TTD DL+ +C +YG IISTKAILDK TN C+GYGFVDFES
Sbjct: 7 TGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESP 66
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A AV AL +KGI AQMA+QQEQDPTNLYI NLP N E LE++ +KY V+STRIL
Sbjct: 67 ISAQKAVAALVNKGIQAQMAKQQEQDPTNLYIQNLPQNCDEAMLENMFSKYGKVISTRIL 126
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK-----EPLLVKFADSGLKKRGAG 225
RD + SKGVGFAR+ES +KC+Q+I+ FN LPG + L+VKFAD G KKR
Sbjct: 127 RDKDTNSKGVGFARMESAEKCEQVIKDFNKKMLPGEVSLRCIQELVVKFADGGPKKR--- 183
Query: 226 AGGPNIYRGPGAEVRLW 242
+G G ++ LW
Sbjct: 184 -------QGQGQDMVLW 193
>gi|354476557|ref|XP_003500491.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 2 [Cricetulus griseus]
Length = 386
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|332234021|ref|XP_003266206.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Nomascus leucogenys]
gi|332814556|ref|XP_003309322.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Pan troglodytes]
gi|397500598|ref|XP_003820996.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Pan paniscus]
gi|426337503|ref|XP_004032743.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Gorilla gorilla gorilla]
Length = 389
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|403258920|ref|XP_003921989.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Saimiri boliviensis boliviensis]
Length = 389
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|453413|emb|CAA54628.1| MSSP-2 [Homo sapiens]
Length = 389
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|354476559|ref|XP_003500492.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 3 [Cricetulus griseus]
Length = 356
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|74221534|dbj|BAE21490.1| unnamed protein product [Mus musculus]
Length = 370
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 147/210 (70%), Gaps = 14/210 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYE 254
PN Y G R W RD A+ L Y+
Sbjct: 199 -QNPNKYIPNG---RPWPRDGEAEMTLTYD 224
>gi|149639381|ref|XP_001507141.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Ornithorhynchus anatinus]
Length = 420
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGVPAPTEPLLCKFADGGQKKR 230
>gi|348512352|ref|XP_003443707.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Oreochromis niloticus]
Length = 422
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 160/262 (61%), Gaps = 30/262 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPATTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKASGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL---PG---SKEPLLVKFADSGLKKRGAGAG 227
N S+GVGFAR+ES +KCD +IQ FNG L PG EPLL KFAD G KKR
Sbjct: 176 NGLSRGVGFARMESTEKCDVVIQNFNGKFLKTPPGMTAPSEPLLCKFADGGQKKRQTQVK 235
Query: 228 GPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPI-------PATIQYQRFTAGPGGTGHIP 280
P R W R+ +S +A + T + P +I R A T I
Sbjct: 236 YPQ-------NGRSWTRE-GESGMALTYDPTAMQNGFYSSPYSISTNRMIAQTSITPFIA 287
Query: 281 AGYTP--------WVP-TQYVM 293
A P W+P QYVM
Sbjct: 288 ASPVPTYQVQSTSWMPHQQYVM 309
>gi|348519883|ref|XP_003447459.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Oreochromis niloticus]
Length = 394
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 147/207 (71%), Gaps = 14/207 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL+ TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 47 GWEQLSKTNLYIRGLSPSTTDHDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 106
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILR
Sbjct: 107 AAQKAVAALKTSGVQAQMAKQQEQDPTNLYISNLPVSVDEQELENMLKHFGQVISTRILR 166
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KCD +I FNG + P EPLL KFAD G KKR +
Sbjct: 167 DSSGVSRGVGFARMESTEKCDAVISHFNGKFIKTPPGVPAPIEPLLCKFADGGQKKRQSQ 226
Query: 226 AGGPNIYRGPGAEVRLWGRDSADSQLA 252
N + G R WGRD DS+LA
Sbjct: 227 ----NKF---GQNGRHWGRD-GDSRLA 245
>gi|149022096|gb|EDL78990.1| rCG26906, isoform CRA_d [Rattus norvegicus]
Length = 388
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 40 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 99
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 100 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 159
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 160 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 216
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 217 -QNPNKYIPNG---RPWPRE 232
>gi|3746338|gb|AAC63910.1| RNA-binding protein [Homo sapiens]
Length = 411
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 47 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 106
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 107 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 166
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 167 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 221
>gi|355715849|gb|AES05422.1| RNA binding motif, single stranded interacting protein 2 [Mustela
putorius furo]
Length = 356
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 141/194 (72%), Gaps = 7/194 (3%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
P + +N N S G+ G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK
Sbjct: 11 PPSPSNSTPNNSSGS-NGNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDK 69
Query: 95 TTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDL 154
+TNKC+GYGFVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +L
Sbjct: 70 STNKCKGYGFVDFDSPSAAQKAVAALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQEL 129
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKE 208
E +L + V+STRILRD + TS+GVGFAR+ES +KC+ +I FNG + +P +
Sbjct: 130 EGMLKPFGQVISTRILRDTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPAGVPAPSD 189
Query: 209 PLLVKFADSGLKKR 222
PLL KFAD G KKR
Sbjct: 190 PLLCKFADGGPKKR 203
>gi|327261782|ref|XP_003215707.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Anolis carolinensis]
Length = 419
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGVPAPTEPLLCKFADGGQKKR 229
>gi|426249020|ref|XP_004018250.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Ovis aries]
Length = 421
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|297287054|ref|XP_002803089.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 3 [Macaca mulatta]
Length = 421
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|358418058|ref|XP_003583827.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Bos taurus]
gi|359078076|ref|XP_003587651.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Bos taurus]
Length = 421
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|363730217|ref|XP_418760.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Gallus gallus]
Length = 439
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 68 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 127
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 128 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDA 187
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG LP EPLL KFAD G KKR
Sbjct: 188 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGLPAPTEPLLCKFADGGQKKR 242
>gi|338715035|ref|XP_003363196.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Equus caballus]
Length = 433
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|338715033|ref|XP_003363195.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Equus caballus]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|358418054|ref|XP_003583825.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Bos taurus]
gi|359078069|ref|XP_003587649.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Bos taurus]
gi|296475093|tpg|DAA17208.1| TPA: RNA binding motif, single stranded interacting protein 3-like
[Bos taurus]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|158259039|dbj|BAF85478.1| unnamed protein product [Homo sapiens]
Length = 421
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|410336417|gb|JAA37155.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
Length = 421
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|348580920|ref|XP_003476226.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
isoform 1 [Cavia porcellus]
Length = 407
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 NGTSRGVGFARMESTEKCEAIITQFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|295148139|ref|NP_001171182.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 5
[Homo sapiens]
gi|296228265|ref|XP_002759723.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Callithrix jacchus]
gi|332816330|ref|XP_003309728.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Pan troglodytes]
gi|397511668|ref|XP_003826191.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Pan paniscus]
gi|403289971|ref|XP_003936110.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Saimiri boliviensis boliviensis]
gi|426339809|ref|XP_004033832.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Gorilla gorilla gorilla]
gi|119584809|gb|EAW64405.1| RNA binding motif, single stranded interacting protein, isoform
CRA_a [Homo sapiens]
gi|410251676|gb|JAA13805.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
gi|410301216|gb|JAA29208.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
Length = 421
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|426249014|ref|XP_004018247.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Ovis aries]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|345789082|ref|XP_003433173.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Canis lupus familiaris]
Length = 433
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|224045407|ref|XP_002197782.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Taeniopygia guttata]
Length = 419
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG LP EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGLPAPTEPLLCKFADGGQKKR 229
>gi|73989917|ref|XP_862067.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 8 [Canis lupus familiaris]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|348588901|ref|XP_003480203.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 1 [Cavia porcellus]
Length = 415
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPNEPLLCKFADGGQKKR 225
>gi|51317351|ref|NP_055298.2| RNA-binding motif, single-stranded-interacting protein 3 isoform 2
[Homo sapiens]
gi|332816328|ref|XP_003309727.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Pan troglodytes]
gi|426339813|ref|XP_004033834.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Gorilla gorilla gorilla]
gi|441610942|ref|XP_003256847.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Nomascus leucogenys]
gi|119584811|gb|EAW64407.1| RNA binding motif, single stranded interacting protein, isoform
CRA_c [Homo sapiens]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|395519618|ref|XP_003763940.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 2 [Sarcophilus harrisii]
Length = 356
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 149/220 (67%), Gaps = 13/220 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQ 265
N Y G R W R+ S+ P A +Q
Sbjct: 199 -QNQNKYIQNG---RAWHREGEVSKAGMTLTYDPTTAALQ 234
>gi|149639490|ref|XP_001510957.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like isoform 1 [Ornithorhynchus anatinus]
Length = 403
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR 231
>gi|291399748|ref|XP_002716283.1| PREDICTED: RNA binding motif, single stranded interacting protein
3-like [Oryctolagus cuniculus]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|297287052|ref|XP_002803088.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 2 [Macaca mulatta]
Length = 433
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|295148142|ref|NP_001171183.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 4
[Homo sapiens]
gi|332215430|ref|XP_003256848.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Nomascus leucogenys]
gi|390476436|ref|XP_003735123.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Callithrix jacchus]
gi|426339815|ref|XP_004033835.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 5 [Gorilla gorilla gorilla]
gi|109659040|gb|AAI17316.1| RBMS3 protein [Homo sapiens]
gi|219520674|gb|AAI43522.1| Unknown (protein for MGC:177047) [Homo sapiens]
Length = 433
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|344288051|ref|XP_003415764.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Loxodonta africana]
Length = 420
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|74219194|dbj|BAE26733.1| unnamed protein product [Mus musculus]
Length = 370
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTTPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 199 -QNPNKYIPNG---RPWPRD 214
>gi|126326231|ref|XP_001366555.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Monodelphis domestica]
Length = 403
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR 231
>gi|392350402|ref|XP_001061329.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 4 [Rattus norvegicus]
Length = 415
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|351702929|gb|EHB05848.1| RNA-binding motif, single-stranded-interacting protein 3, partial
[Heterocephalus glaber]
Length = 412
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 32 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 91
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 92 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 151
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 152 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 206
>gi|348588907|ref|XP_003480206.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 4 [Cavia porcellus]
Length = 428
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPNEPLLCKFADGGQKKR 225
>gi|351703611|gb|EHB06530.1| RNA-binding motif, single-stranded-interacting protein 2
[Heterocephalus glaber]
Length = 407
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D N TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTNGTSRGVGFARMESTEKCEAIITHFNGKFIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|332816334|ref|XP_003309729.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Pan troglodytes]
Length = 433
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|149022092|gb|EDL78986.1| rCG26906, isoform CRA_a [Rattus norvegicus]
Length = 401
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 53 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 112
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 113 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 172
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 173 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 229
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 230 -QNPNKYIPNG---RPWPRE 245
>gi|426249018|ref|XP_004018249.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Ovis aries]
Length = 433
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|126341451|ref|XP_001370004.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Monodelphis domestica]
Length = 421
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 57 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 116
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 117 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 176
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 177 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGVPAPTEPLLCKFADGGQKKR 231
>gi|344288053|ref|XP_003415765.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Loxodonta africana]
Length = 434
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|344238365|gb|EGV94468.1| RNA-binding motif, single-stranded-interacting protein 3
[Cricetulus griseus]
Length = 381
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 17 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 76
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 77 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 136
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 137 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 191
>gi|358418056|ref|XP_003583826.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Bos taurus]
gi|359078072|ref|XP_003587650.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Bos taurus]
Length = 433
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|58865940|ref|NP_001012184.1| RNA-binding motif, single-stranded-interacting protein 1 [Rattus
norvegicus]
gi|81909957|sp|Q5PQP1.1|RBMS1_RAT RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1
gi|56269819|gb|AAH87094.1| RNA binding motif, single stranded interacting protein 1 [Rattus
norvegicus]
gi|149022095|gb|EDL78989.1| rCG26906, isoform CRA_c [Rattus norvegicus]
Length = 403
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 232 -QNPNKYIPNG---RPWPRE 247
>gi|338715037|ref|XP_001492687.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Equus caballus]
Length = 436
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|432933015|ref|XP_004081778.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Oryzias latipes]
Length = 394
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 146/207 (70%), Gaps = 14/207 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL+ TTD DL+ +C YG IISTKAILDKTTNKC+GYGFVDF+S
Sbjct: 46 GWDQLSKTNLYIRGLSPSTTDHDLVKLCKPYGKIISTKAILDKTTNKCKGYGFVDFDSPA 105
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L ++ VVSTR+LR
Sbjct: 106 AAQKAVAALKTSGIQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKRFGQVVSTRVLR 165
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG + EPLL KFAD G KKR
Sbjct: 166 DSSGVSRGVGFARMESTEKCEAVISHFNGKFIKTPAGVSAPSEPLLCKFADGGQKKR--- 222
Query: 226 AGGPNIYRGPGAEVRLWGRDSADSQLA 252
PN + G R W RDS D +LA
Sbjct: 223 -QNPNKF---GQNGRAWARDS-DCRLA 244
>gi|426249016|ref|XP_004018248.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Ovis aries]
Length = 436
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|149022093|gb|EDL78987.1| rCG26906, isoform CRA_b [Rattus norvegicus]
gi|149022094|gb|EDL78988.1| rCG26906, isoform CRA_b [Rattus norvegicus]
gi|149022097|gb|EDL78991.1| rCG26906, isoform CRA_b [Rattus norvegicus]
Length = 370
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWPRE 214
>gi|287324565|ref|NP_001165592.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 4
[Mus musculus]
gi|26337895|dbj|BAC32633.1| unnamed protein product [Mus musculus]
gi|148677320|gb|EDL09267.1| RNA binding motif, single stranded interacting protein, isoform
CRA_f [Mus musculus]
Length = 463
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 100 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 159
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 160 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 219
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 220 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 274
>gi|339522363|gb|AEJ84346.1| RNA-binding motif single-stranded-interacting protein 1 [Capra
hircus]
Length = 418
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 135/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL +TTD+D + +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 54 GWEQLSKTNLYIRGLPPNTTDQDRVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 113
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 114 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMGEQELENMLKPFGQVISTRILR 173
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 174 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR 230
>gi|395519616|ref|XP_003763939.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 1 [Sarcophilus harrisii]
Length = 390
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 42 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 101
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 102 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 161
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 162 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR 218
>gi|358418060|ref|XP_001252034.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Bos taurus]
gi|359078079|ref|XP_002696917.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Bos taurus]
Length = 436
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|4730906|dbj|BAA77262.1| MSSP [Mus musculus]
gi|4730921|dbj|BAA77264.1| MSSP [Mus musculus]
gi|133777054|gb|AAH16501.2| RNA binding motif, single stranded interacting protein 1 [Mus
musculus]
gi|148695021|gb|EDL26968.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695022|gb|EDL26969.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695023|gb|EDL26970.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695024|gb|EDL26971.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
gi|148695025|gb|EDL26972.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Mus musculus]
Length = 370
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 199 -QNPNKYIPNG---RPWPRD 214
>gi|355715852|gb|AES05423.1| RNA binding motif, single stranded interacting protein [Mustela
putorius furo]
Length = 456
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 108 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 167
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 168 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 227
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 228 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 282
>gi|348580922|ref|XP_003476227.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
isoform 2 [Cavia porcellus]
Length = 381
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 NGTSRGVGFARMESTEKCEAIITQFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|213513185|ref|NP_001135403.1| RNA-binding motif, single-stranded-interacting protein 1 isoform 2
[Mus musculus]
Length = 401
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 53 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 112
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 113 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 172
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 173 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 229
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 230 -QNPNKYIPNG---RPWPRD 245
>gi|207079823|ref|NP_001129003.1| RNA-binding motif, single-stranded-interacting protein 3 [Pongo
abelii]
gi|75070779|sp|Q5RBD3.1|RBMS3_PONAB RecName: Full=RNA-binding motif, single-stranded-interacting
protein 3
gi|55728366|emb|CAH90927.1| hypothetical protein [Pongo abelii]
Length = 436
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|410336415|gb|JAA37154.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
Length = 437
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|51317355|ref|NP_001003793.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 1
[Homo sapiens]
gi|296228267|ref|XP_002759724.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Callithrix jacchus]
gi|397511666|ref|XP_003826190.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Pan paniscus]
gi|403289969|ref|XP_003936109.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Saimiri boliviensis boliviensis]
gi|426339807|ref|XP_004033831.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Gorilla gorilla gorilla]
gi|74762382|sp|Q6XE24.1|RBMS3_HUMAN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 3
gi|37930169|gb|AAP75555.1| RNA binding motif single stranded interacting protein 3 isoform
transcript variant DD23-L [Homo sapiens]
gi|119584810|gb|EAW64406.1| RNA binding motif, single stranded interacting protein, isoform
CRA_b [Homo sapiens]
gi|410251674|gb|JAA13804.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
gi|410301214|gb|JAA29207.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
Length = 437
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|348588903|ref|XP_003480204.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 2 [Cavia porcellus]
Length = 431
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPNEPLLCKFADGGQKKR 225
>gi|297287056|ref|XP_001095338.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 1 [Macaca mulatta]
Length = 437
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|213513205|ref|NP_001135404.1| RNA-binding motif, single-stranded-interacting protein 1 isoform 1
[Mus musculus]
Length = 417
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 53 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 112
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 113 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 172
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 173 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 229
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 230 -QNPNKYIPNG---RPWPRD 245
>gi|345789080|ref|XP_850695.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 6 [Canis lupus familiaris]
Length = 436
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|332816332|ref|XP_516341.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 5 [Pan troglodytes]
Length = 436
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|344288049|ref|XP_003415763.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Loxodonta africana]
Length = 436
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|213513165|ref|NP_064692.2| RNA-binding motif, single-stranded-interacting protein 1 isoform 3
[Mus musculus]
gi|55976561|sp|Q91W59.1|RBMS1_MOUSE RecName: Full=RNA-binding motif, single-stranded-interacting
protein 1; AltName: Full=Single-stranded DNA-binding
protein MSSP-1
gi|74151115|dbj|BAE27681.1| unnamed protein product [Mus musculus]
Length = 403
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 115 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 232 -QNPNKYIPNG---RPWPRD 247
>gi|148695026|gb|EDL26973.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_b [Mus musculus]
Length = 393
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 45 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 104
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 105 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 164
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 165 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 221
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 222 -QNPNKYIPNG---RPWPRD 237
>gi|287324670|ref|NP_001165593.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 2
[Mus musculus]
gi|26326603|dbj|BAC27045.1| unnamed protein product [Mus musculus]
gi|148677319|gb|EDL09266.1| RNA binding motif, single stranded interacting protein, isoform
CRA_e [Mus musculus]
Length = 415
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|355560081|gb|EHH16809.1| hypothetical protein EGK_12163 [Macaca mulatta]
gi|355747118|gb|EHH51732.1| hypothetical protein EGM_11167 [Macaca fascicularis]
Length = 436
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|26342432|dbj|BAC34878.1| unnamed protein product [Mus musculus]
Length = 422
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 42 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 101
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 102 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 161
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 162 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 216
>gi|348529959|ref|XP_003452479.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Oreochromis niloticus]
Length = 415
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 138/200 (69%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S
Sbjct: 49 GAEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPA 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L V+STRILR
Sbjct: 109 AAQKAVSSLKATGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPLGHVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR +
Sbjct: 169 DANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPTEPLLCKFADGGQKKRQSQ 228
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
+ P R W R+
Sbjct: 229 SKYPQ-------NGRPWHRE 241
>gi|34785556|gb|AAH57866.1| Rbms1 protein [Mus musculus]
gi|74145550|dbj|BAE36195.1| unnamed protein product [Mus musculus]
Length = 386
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 82 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 199 -QNPNKYIPNG---RPWPRD 214
>gi|338715039|ref|XP_001492731.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Equus caballus]
Length = 418
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|358418062|ref|XP_003583828.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Bos taurus]
gi|359078082|ref|XP_003587652.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 5 [Bos taurus]
Length = 418
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|354467695|ref|XP_003496304.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 1 [Cricetulus griseus]
Length = 414
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|77735679|ref|NP_001029537.1| RNA-binding motif, single-stranded-interacting protein 2 [Bos
taurus]
gi|122143024|sp|Q3ZC34.1|RBMS2_BOVIN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 2
gi|73587355|gb|AAI02936.1| RNA binding motif, single stranded interacting protein 2 [Bos
taurus]
gi|296487645|tpg|DAA29758.1| TPA: RNA-binding motif, single-stranded-interacting protein 2 [Bos
taurus]
Length = 407
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 132/178 (74%), Gaps = 6/178 (3%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
T +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 48 TAHDQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSP 107
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRIL
Sbjct: 108 SAAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRIL 167
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
RD + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 168 RDTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|149018308|gb|EDL76949.1| rCG25178, isoform CRA_d [Rattus norvegicus]
Length = 389
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|410301218|gb|JAA29209.1| RNA binding motif, single stranded interacting protein 3 [Pan
troglodytes]
Length = 420
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|334330107|ref|XP_001366652.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
isoform 3 [Monodelphis domestica]
Length = 356
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 136/177 (76%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKATGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPAEPLLCKFADGGQKKR 198
>gi|51317353|ref|NP_001003792.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 3
[Homo sapiens]
gi|296228269|ref|XP_002759725.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Callithrix jacchus]
gi|397511670|ref|XP_003826192.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Pan paniscus]
gi|403289973|ref|XP_003936111.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Saimiri boliviensis boliviensis]
gi|426339811|ref|XP_004033833.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Gorilla gorilla gorilla]
gi|119584812|gb|EAW64408.1| RNA binding motif, single stranded interacting protein, isoform
CRA_d [Homo sapiens]
Length = 419
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|297287058|ref|XP_002803090.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 4 [Macaca mulatta]
Length = 419
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|432882375|ref|XP_004073999.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Oryzias latipes]
Length = 395
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 138/200 (69%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S
Sbjct: 28 GAEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPA 87
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L V+STRILR
Sbjct: 88 AAQKAVSSLKATGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPLGHVISTRILR 147
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR +
Sbjct: 148 DANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPTEPLLCKFADGGQKKRQSQ 207
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
+ P R W R+
Sbjct: 208 SKYPQ-------NGRPWHRE 220
>gi|348588905|ref|XP_003480205.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like isoform 3 [Cavia porcellus]
Length = 414
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPNEPLLCKFADGGQKKR 225
>gi|119631792|gb|EAX11387.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_e [Homo sapiens]
Length = 384
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 151/219 (68%), Gaps = 16/219 (7%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGS-KEPLLVKFADSGLKKRGAGAG 227
D++ TS+GVGFAR+ES +K + +I FNG T PG+ EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKWEAVIGHFNGKFIKTPPGAPTEPLLCKFADGGQKKR----Q 197
Query: 228 GPNIYRGPGAEVRLWGRD-SADSQLAYEHPMTPIPATIQ 265
PN Y G R W R+ A L Y+ P A IQ
Sbjct: 198 NPNKYIPNG---RPWHREGEAGMTLTYD----PTTAAIQ 229
>gi|287324761|ref|NP_001165594.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 1
[Mus musculus]
gi|125987522|sp|Q8BWL5.2|RBMS3_MOUSE RecName: Full=RNA-binding motif, single-stranded-interacting
protein 3
gi|148677316|gb|EDL09263.1| RNA binding motif, single stranded interacting protein, isoform
CRA_b [Mus musculus]
Length = 431
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|345789084|ref|XP_862040.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 7 [Canis lupus familiaris]
Length = 418
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|344288055|ref|XP_003415766.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Loxodonta africana]
Length = 418
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|82697065|gb|AAI08403.1| RNA binding motif, single stranded interacting protein [Mus
musculus]
Length = 414
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|47228666|emb|CAG07398.1| unnamed protein product [Tetraodon nigroviridis]
Length = 466
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 142/201 (70%), Gaps = 13/201 (6%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
+G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 25 SGGEQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSP 84
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + +STRIL
Sbjct: 85 TSAQKAVTALKAGGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFSQAISTRIL 144
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKRGA 224
RD N TS+GVGFAR+ES +KC+ +IQ FNG +P EPLL KFAD G KKR
Sbjct: 145 RDANGTSRGVGFARMESTEKCEAIIQHFNGKYIKMPPGIPVPSEPLLCKFADGGQKKR-- 202
Query: 225 GAGGPNIYRGPGAEVRLWGRD 245
+ G + G R W RD
Sbjct: 203 QSQGKYLQNG-----RPWTRD 218
>gi|148747313|ref|NP_848775.2| RNA-binding motif, single-stranded-interacting protein 3 isoform 3
[Mus musculus]
gi|26328705|dbj|BAC28091.1| unnamed protein product [Mus musculus]
gi|109730747|gb|AAI17842.1| RNA binding motif, single stranded interacting protein [Mus
musculus]
gi|148677317|gb|EDL09264.1| RNA binding motif, single stranded interacting protein, isoform
CRA_c [Mus musculus]
Length = 414
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|354467701|ref|XP_003496307.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 4 [Cricetulus griseus]
Length = 430
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|149756595|ref|XP_001504897.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Equus caballus]
Length = 407
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/244 (49%), Positives = 154/244 (63%), Gaps = 21/244 (8%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAG 225
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR--Q 226
Query: 226 AGGPNIYRGPGAEVRLWGRD--------SADSQLAYEHPMTPIPATIQYQRFTAGPGGTG 277
G + G R W R+ + D A ++ P P I R A +
Sbjct: 227 NQGKFVQNG-----RAWPRNGDMGGMALTYDPTTALQNGFYPAPYNITSNRMLAQSALSP 281
Query: 278 HIPA 281
++P+
Sbjct: 282 YLPS 285
>gi|426224935|ref|XP_004006624.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Ovis aries]
Length = 407
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG +P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGIPAPSDPLLCKFADGGPKKR 225
>gi|149018305|gb|EDL76946.1| rCG25178, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 68 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 127
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 128 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 187
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 188 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 242
>gi|395816927|ref|XP_003781934.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Otolemur garnettii]
Length = 425
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 116 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 175
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 176 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 230
>gi|395835220|ref|XP_003790580.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Otolemur garnettii]
Length = 407
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGIQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITYFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|440899480|gb|ELR50777.1| RNA-binding motif, single-stranded-interacting protein 2 [Bos
grunniens mutus]
Length = 407
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|354467699|ref|XP_003496306.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 3 [Cricetulus griseus]
Length = 386
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|26326473|dbj|BAC26980.1| unnamed protein product [Mus musculus]
Length = 414
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|444518240|gb|ELV12051.1| RNA-binding motif, single-stranded-interacting protein 2 [Tupaia
chinensis]
Length = 354
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 133/177 (75%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQAGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKR 222
DN+ TS+GVGFAR+ES +KC+ +I FNG +P +PLL KFAD G KKR
Sbjct: 169 DNSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGIPVPSDPLLCKFADGGPKKR 225
>gi|149018306|gb|EDL76947.1| rCG25178, isoform CRA_b [Rattus norvegicus]
Length = 405
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|119631791|gb|EAX11386.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_d [Homo sapiens]
Length = 371
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 143/198 (72%), Gaps = 11/198 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGS-KEPLLVKFADSGLKKRGAGAG 227
D++ TS+GVGFAR+ES +K + +I FNG T PG+ EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKWEAVIGHFNGKFIKTPPGAPTEPLLCKFADGGQKKR----Q 197
Query: 228 GPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 198 NPNKYIPNG---RPWHRE 212
>gi|37930176|gb|AAP75556.1| RNA binding motif single stranded interacting protein 3 isoform
transcript variant DD23-S [Homo sapiens]
Length = 419
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKA+LDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKALLDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGPVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 229
>gi|354467703|ref|XP_003496308.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 5 [Cricetulus griseus]
Length = 413
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|149018309|gb|EDL76950.1| rCG25178, isoform CRA_e [Rattus norvegicus]
Length = 388
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|392350400|ref|XP_003750647.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Rattus norvegicus]
Length = 402
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|417400385|gb|JAA47142.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 407
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVMALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|410964971|ref|XP_003989026.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2, partial [Felis catus]
Length = 385
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK+TNKC+GYGFVDF+S
Sbjct: 27 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKSTNKCKGYGFVDFDSPS 86
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 87 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 146
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + +P +PLL KFAD G KKR
Sbjct: 147 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPAGVPAPSDPLLCKFADGGPKKR 203
>gi|354488135|ref|XP_003506226.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Cricetulus griseus]
Length = 381
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 141/194 (72%), Gaps = 7/194 (3%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
P + N N S G+ G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK
Sbjct: 33 PPSPRNSTPNSSSGS-NGHDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDK 91
Query: 95 TTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDL 154
TTNKC+GYGFVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +L
Sbjct: 92 TTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQEL 151
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKE 208
E +L + V+STRILRD++ TS+GVGFAR+ES +KC+ +I FNG T PG +
Sbjct: 152 EGMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVTAPSD 211
Query: 209 PLLVKFADSGLKKR 222
PLL KFAD G KKR
Sbjct: 212 PLLCKFADGGPKKR 225
>gi|395540318|ref|XP_003772102.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Sarcophilus harrisii]
Length = 451
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 93 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 152
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 153 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 212
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 213 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGVPAPTEPLLCKFADGGQKKR 267
>gi|287324984|ref|NP_001165597.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 6
[Mus musculus]
gi|26334205|dbj|BAC30820.1| unnamed protein product [Mus musculus]
Length = 386
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|350584149|ref|XP_003126323.3| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
isoform 1, partial [Sus scrofa]
Length = 385
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 29 DQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 88
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 89 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 148
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 149 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 203
>gi|354467697|ref|XP_003496305.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
isoform 2 [Cricetulus griseus]
Length = 402
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|148677321|gb|EDL09268.1| RNA binding motif, single stranded interacting protein, isoform
CRA_g [Mus musculus]
Length = 386
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|432908980|ref|XP_004078080.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Oryzias latipes]
Length = 537
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 161/262 (61%), Gaps = 30/262 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 172 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 231
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 232 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPVSMDEQELENMLKPFGHVISTRILRDA 291
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL---PGS---KEPLLVKFADSGLKKRGAGAG 227
N S+GVGFAR+ES +KCD +IQ FNG L PG EPLL KFAD G KKR
Sbjct: 292 NGLSRGVGFARMESTEKCDVVIQNFNGKFLKTPPGMTAPAEPLLCKFADGGQKKRQTQVK 351
Query: 228 GPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPI-------PATIQYQRFTAGPGGTGHIP 280
Y G R W R+ +S +A + T + P +I R A T I
Sbjct: 352 ----YHQNG---RPWTRE-GESGMALTYDPTVVQNGFYSSPYSISTNRMIAQTSITPFIA 403
Query: 281 AG--------YTPWVP-TQYVM 293
A T W+P QYVM
Sbjct: 404 ASPVSTYQVQSTSWMPHQQYVM 425
>gi|149018307|gb|EDL76948.1| rCG25178, isoform CRA_c [Rattus norvegicus]
Length = 360
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|114644234|ref|XP_001168729.1| PREDICTED: uncharacterized protein LOC467094 [Pan troglodytes]
gi|397509065|ref|XP_003824957.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Pan paniscus]
gi|410227310|gb|JAA10874.1| RNA binding motif, single stranded interacting protein 2 [Pan
troglodytes]
gi|410259784|gb|JAA17858.1| RNA binding motif, single stranded interacting protein 2 [Pan
troglodytes]
gi|410294868|gb|JAA26034.1| RNA binding motif, single stranded interacting protein 2 [Pan
troglodytes]
gi|410333873|gb|JAA35883.1| RNA binding motif, single stranded interacting protein 2 [Pan
troglodytes]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|4506449|ref|NP_002889.1| RNA-binding motif, single-stranded-interacting protein 2 [Homo
sapiens]
gi|55976301|sp|Q15434.1|RBMS2_HUMAN RecName: Full=RNA-binding motif, single-stranded-interacting
protein 2; AltName: Full=Suppressor of CDC2 with
RNA-binding motif 3
gi|558530|dbj|BAA05842.1| SCR3 [Homo sapiens]
gi|20379908|gb|AAH27863.1| RNA binding motif, single stranded interacting protein 2 [Homo
sapiens]
gi|49119638|gb|AAH72679.1| RNA binding motif, single stranded interacting protein 2 [Homo
sapiens]
gi|119617353|gb|EAW96947.1| RNA binding motif, single stranded interacting protein 2, isoform
CRA_a [Homo sapiens]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|392342135|ref|XP_002727189.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Rattus norvegicus]
Length = 430
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|301761019|ref|XP_002916038.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Ailuropoda melanoleuca]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK+TNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKSTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKEPLLVKFADSGLKKR 222
D TS+GVGFAR+ES +KC+ +I FNG + +P +PLL KFAD G KKR
Sbjct: 169 DTRGTSRGVGFARMESTEKCEAIITHFNGKYIKTPAGVPAPSDPLLCKFADGGPKKR 225
>gi|297692191|ref|XP_002823450.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Pongo abelii]
Length = 377
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 19 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 78
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 79 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 138
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 139 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 195
>gi|388453925|ref|NP_001253318.1| RNA-binding motif, single-stranded-interacting protein 2 [Macaca
mulatta]
gi|355564370|gb|EHH20870.1| Suppressor of CDC2 with RNA-binding motif 3 [Macaca mulatta]
gi|355786224|gb|EHH66407.1| Suppressor of CDC2 with RNA-binding motif 3 [Macaca fascicularis]
gi|384944470|gb|AFI35840.1| RNA-binding motif, single-stranded-interacting protein 2 [Macaca
mulatta]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|74179640|dbj|BAE22471.1| unnamed protein product [Mus musculus]
Length = 403
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +L+++L + V+STR+LR
Sbjct: 115 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELKNMLKPFGQVISTRVLR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 175 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 231
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W RD
Sbjct: 232 -QNPNKYIPNG---RPWPRD 247
>gi|73968414|ref|XP_538236.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
isoform 1 [Canis lupus familiaris]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 133/177 (75%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK+TNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKSTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + +P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPAGVPAPSDPLLCKFADGGPKKR 225
>gi|402886489|ref|XP_003906661.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Papio anubis]
Length = 377
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 19 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 78
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 79 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 138
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 139 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 195
>gi|326922850|ref|XP_003207657.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Meleagris gallopavo]
Length = 424
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 135/179 (75%), Gaps = 10/179 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIR L +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 76 GWDQLSKTNLYIRALPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 135
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 136 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 195
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGS--------TLPGSKEPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG ++P EPLL KFAD G KKR
Sbjct: 196 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPAGVSVPA--EPLLCKFADGGQKKR 252
>gi|291389455|ref|XP_002711128.1| PREDICTED: RNA binding motif, single stranded interacting protein 2
isoform 1 [Oryctolagus cuniculus]
Length = 407
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 155/247 (62%), Gaps = 21/247 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALRASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR--QNQ 228
Query: 228 GPNIYRGPGAEVRLWGRD--------SADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHI 279
G + G R W R+ + D A ++ P P I R A ++
Sbjct: 229 GKFVQNG-----RAWPRNGDMGGMALTYDPTTALQNGFYPAPYNITSSRMLAQAALPPYL 283
Query: 280 PAGYTPW 286
P+ +P+
Sbjct: 284 PSPGSPY 290
>gi|380807335|gb|AFE75543.1| RNA-binding motif, single-stranded-interacting protein 1 isoform a,
partial [Macaca mulatta]
Length = 243
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 36 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 95
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 96 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 155
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 156 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 212
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 213 -QNPNKYIPNG---RPWHRE 228
>gi|296212042|ref|XP_002752659.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Callithrix jacchus]
Length = 407
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|380807337|gb|AFE75544.1| RNA-binding motif, single-stranded-interacting protein 1 isoform c,
partial [Macaca mulatta]
Length = 240
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 148/210 (70%), Gaps = 14/210 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 36 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 95
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 96 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 155
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 156 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 212
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYE 254
PN Y G R W R+ A L Y+
Sbjct: 213 -QNPNKYIPNG---RPWHREGEAGMTLTYD 238
>gi|291389457|ref|XP_002711129.1| PREDICTED: RNA binding motif, single stranded interacting protein 2
isoform 2 [Oryctolagus cuniculus]
Length = 381
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 155/247 (62%), Gaps = 21/247 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALRASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAG 227
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR--QNQ 228
Query: 228 GPNIYRGPGAEVRLWGRD--------SADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHI 279
G + G R W R+ + D A ++ P P I R A ++
Sbjct: 229 GKFVQNG-----RAWPRNGDMGGMALTYDPTTALQNGFYPAPYNITSSRMLAQAALPPYL 283
Query: 280 PAGYTPW 286
P+ +P+
Sbjct: 284 PSPGSPY 290
>gi|348516630|ref|XP_003445841.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Oreochromis niloticus]
Length = 370
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 140/197 (71%), Gaps = 9/197 (4%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG EQLSKTNLYIRGL TTD DLI +C QYG I S KAILDKTTNKC+GYGFVDF+S
Sbjct: 34 TGLEQLSKTNLYIRGLPPATTDLDLIKLCHQYGKIQSAKAILDKTTNKCKGYGFVDFDSP 93
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
AL AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + VVSTRIL
Sbjct: 94 AAALKAVHALKTSGIQAQMAKQQEQDPTNLYISNLPLSVDEKELENMLQPFGQVVSTRIL 153
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS------KEPLLVKFADSGLKKRGA 224
RD + S+GVGFAR+++ ++C+ +I FNG + + +PLL KFADS KK
Sbjct: 154 RDYSGNSRGVGFARMDTTEQCNAVISHFNGKFIKTASGALAPSQPLLCKFADSQRKKHAH 213
Query: 225 GAGGPNIYRGPGAEVRL 241
G PN G A++RL
Sbjct: 214 GGFVPN---GQTADLRL 227
>gi|287324845|ref|NP_001165595.1| RNA-binding motif, single-stranded-interacting protein 3 isoform 5
[Mus musculus]
gi|26328767|dbj|BAC28122.1| unnamed protein product [Mus musculus]
Length = 402
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|149018310|gb|EDL76951.1| rCG25178, isoform CRA_f [Rattus norvegicus]
Length = 343
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|391337724|ref|XP_003743215.1| PREDICTED: protein alan shepard-like [Metaseiulus occidentalis]
Length = 306
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 134/172 (77%), Gaps = 4/172 (2%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
+LSKTNLYI+GLT++TTD+DL N+C+QYG IISTKAIL+K T KCRGYGFVDF + A
Sbjct: 110 ELSKTNLYIKGLTENTTDRDLYNLCTQYGTIISTKAILNKDTQKCRGYGFVDFNTASEAE 169
Query: 115 AAVKALQDKGIHAQMAR----QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+AVKAL +G+ AQMA+ Q E DPTNLYIANLP + E DLE+LL+ + +VVSTRIL
Sbjct: 170 SAVKALVAQGVQAQMAKSPNSQIEPDPTNLYIANLPAHMSEPDLETLLSVHGSVVSTRIL 229
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD N S+GVGFAR+ESK+KC+ +I LF+G L G E LLVKFAD KKR
Sbjct: 230 RDVNMQSRGVGFARMESKEKCEHIIHLFHGKKLSGCSEGLLVKFADGANKKR 281
>gi|355715846|gb|AES05421.1| RNA binding motif, single stranded interacting protein 1 [Mustela
putorius furo]
Length = 223
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 30 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 89
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 90 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 149
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 150 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 206
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 207 -QNPNKYIPNG---RPWHRE 222
>gi|344256389|gb|EGW12493.1| RNA-binding motif, single-stranded-interacting protein 2
[Cricetulus griseus]
Length = 421
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 141/194 (72%), Gaps = 7/194 (3%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
P + N N S G+ G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK
Sbjct: 33 PPSPRNSTPNSSSGS-NGHDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDK 91
Query: 95 TTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDL 154
TTNKC+GYGFVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +L
Sbjct: 92 TTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQEL 151
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKE 208
E +L + V+STRILRD++ TS+GVGFAR+ES +KC+ +I FNG T PG +
Sbjct: 152 EGMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVTAPSD 211
Query: 209 PLLVKFADSGLKKR 222
PLL KFAD G KKR
Sbjct: 212 PLLCKFADGGPKKR 225
>gi|74216579|dbj|BAE37728.1| unnamed protein product [Mus musculus]
Length = 400
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 146/210 (69%), Gaps = 14/210 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDK TNKC+GYGFVDF+S
Sbjct: 135 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGFVDFDSPA 194
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 195 AAQKAVSALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLR 254
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKRGAG 225
D++ S+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 255 DSSGASRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 311
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYE 254
PN Y G R W RD A L Y+
Sbjct: 312 -QNPNKYIPNG---RPWPRDGEAGMTLTYD 337
>gi|449506577|ref|XP_002196753.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein 1
[Taeniopygia guttata]
Length = 403
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 135/179 (75%), Gaps = 10/179 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIR L +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRALPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGS--------TLPGSKEPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG ++P EPLL KFAD G KKR
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPAGVSVPA--EPLLCKFADGGQKKR 231
>gi|45384304|ref|NP_990355.1| RNA-binding motif, single-stranded-interacting protein 1 [Gallus
gallus]
gi|3116231|dbj|BAA25933.1| MSSP-1 [Gallus gallus]
Length = 373
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 135/179 (75%), Gaps = 10/179 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIR L +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRALPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGS--------TLPGSKEPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG ++P EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPAGVSVPA--EPLLCKFADGGQKKR 198
>gi|70794782|ref|NP_001020574.1| RNA-binding motif, single-stranded-interacting protein 2 [Rattus
norvegicus]
gi|67678407|gb|AAH97377.1| RNA binding motif, single stranded interacting protein 2 [Rattus
norvegicus]
gi|149029715|gb|EDL84886.1| RNA binding motif, single stranded interacting protein 2, isoform
CRA_a [Rattus norvegicus]
Length = 379
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 137/189 (72%), Gaps = 9/189 (4%)
Query: 43 HNGSPGTPTGP---EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
NG+P + +G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC
Sbjct: 35 RNGTPNSSSGSGGNDQLSKTNLYIRGLQPSTTDQDLVKLCQPYGKIVSTKAILDKTTNKC 94
Query: 100 RGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLA 159
+GYGFVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L
Sbjct: 95 KGYGFVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLK 154
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVK 213
+ V+STRILRD S+GVGFAR+ES +KC+ +I FNG T PG +PLL K
Sbjct: 155 PFGQVISTRILRDTTGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCK 214
Query: 214 FADSGLKKR 222
FAD G KKR
Sbjct: 215 FADGGPKKR 223
>gi|148677318|gb|EDL09265.1| RNA binding motif, single stranded interacting protein, isoform
CRA_d [Mus musculus]
Length = 343
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 111 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 171 NGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 225
>gi|344267508|ref|XP_003405608.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Loxodonta africana]
Length = 439
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 83 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 142
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 143 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 202
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 203 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 257
>gi|332207533|ref|XP_003252851.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Nomascus leucogenys]
Length = 407
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPVPSDPLLCKFADGGPKKR 225
>gi|432852376|ref|XP_004067217.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Oryzias latipes]
Length = 423
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 143/219 (65%), Gaps = 9/219 (4%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG EQLSKTNLYIRGL TTD DL+ +C QYG I S KAILDKTTNKC+GYGFVDF+S
Sbjct: 33 TGLEQLSKTNLYIRGLPPATTDLDLVKLCHQYGKIQSAKAILDKTTNKCKGYGFVDFDSP 92
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
AL AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + VVSTRIL
Sbjct: 93 AAALKAVHALKTSGIQAQMAKQQEQDPTNLYISNLPLSVDEKELEKMLQPFGQVVSTRIL 152
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKRGA 224
RD + S+GVGFAR+++ ++C+ +I FNG L +PLL KFADS KK G
Sbjct: 153 RDYSGNSRGVGFARMDTTEQCNGVISHFNGKFLKLASGSLAPSQPLLCKFADSQRKKHGH 212
Query: 225 GAGGPNIYRGP---GAEVRLWGRDSADSQLAYEHPMTPI 260
P+ G GA + SA Q Y P P+
Sbjct: 213 SGITPSAQTGDLRLGAMTLTYDPSSAAIQNGYYSPSYPV 251
>gi|281353275|gb|EFB28859.1| hypothetical protein PANDA_004096 [Ailuropoda melanoleuca]
Length = 333
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDK+TNKC+GYGFVDF+S
Sbjct: 28 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKSTNKCKGYGFVDFDSPS 87
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 88 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 147
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG------STLPGSKEPLLVKFADSGLKKR 222
D TS+GVGFAR+ES +KC+ +I FNG + +P +PLL KFAD G KKR
Sbjct: 148 DTRGTSRGVGFARMESTEKCEAIITHFNGKYIKTPAGVPAPSDPLLCKFADGGPKKR 204
>gi|410899446|ref|XP_003963208.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Takifugu rubripes]
Length = 412
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 141/201 (70%), Gaps = 13/201 (6%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
+G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 63 SGGEQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSP 122
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + +STRIL
Sbjct: 123 TSAQKAVTALKSGGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFSQAISTRIL 182
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKRGA 224
RD N TS+GVGFAR+ES +KC+ +IQ FNG + EPLL KFAD G KKR
Sbjct: 183 RDANGTSRGVGFARMESTEKCEAIIQHFNGKYIKMPPGIPVPPEPLLCKFADGGQKKR-- 240
Query: 225 GAGGPNIYRGPGAEVRLWGRD 245
+ G + G R W RD
Sbjct: 241 QSQGKYLQNG-----RPWTRD 256
>gi|431914027|gb|ELK15289.1| RNA-binding motif, single-stranded-interacting protein 2 [Pteropus
alecto]
Length = 476
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 154/243 (63%), Gaps = 23/243 (9%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 135 DQLSKTNLYIRGLQPGTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 194
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 195 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 254
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGST------LPGSKEPLLVKFADSGLKKRGAGAG 227
+ TS+GVGFAR+ES +KC+ +I FNG +P +PLL KFAD G KKR
Sbjct: 255 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGIPAPSDPLLCKFADGGPKKR--QNQ 312
Query: 228 GPNIYRGPGAEVRLWGR--DSADSQLAYEHPMT-------PIPATIQYQRFTAGPGGTGH 278
G + GP W R D L Y+ P+T P P I R A + +
Sbjct: 313 GKFVQNGPA-----WPRNGDMGSMALTYD-PITALQNGFYPAPYNITPNRMLAQSTLSPY 366
Query: 279 IPA 281
+P+
Sbjct: 367 LPS 369
>gi|198419235|ref|XP_002125486.1| PREDICTED: similar to HrTLC2 isoform 1 [Ciona intestinalis]
Length = 447
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 143/213 (67%), Gaps = 23/213 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL+ T D+DL N+C QYG I+STKAI+D TN C+GYGFVDF+ A
Sbjct: 117 DQLSKTNLYIRGLSAATNDEDLHNLCKQYGKIVSTKAIIDPATNLCKGYGFVDFDRYDSA 176
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV+ L+ +GI AQMA+QQEQDPTNLYI+NLP N E +LE++L+ Y V+STRILRDN
Sbjct: 177 SLAVEQLKHRGIQAQMAKQQEQDPTNLYISNLPRNINEQELENMLSPYGQVISTRILRDN 236
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPG------SKEPLLVKFADSGLKKRGAGA- 226
N+ SKGVGFAR+ESK+KC+Q+I FNG L EPLL KFAD G KK
Sbjct: 237 NSVSKGVGFARMESKEKCEQIICKFNGKYLHNIAGGEQPTEPLLCKFADGGPKKNKQHQK 296
Query: 227 ---GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
GG R W RD D Q AY+ P
Sbjct: 297 FMNGG-----------RQW-RD-GDVQFAYDVP 316
>gi|119631790|gb|EAX11385.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_c [Homo sapiens]
Length = 346
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 143/198 (72%), Gaps = 11/198 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGS-KEPLLVKFADSGLKKRGAGAG 227
D++ TS+GVGFAR+ES +K + +I FNG T PG+ EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKWEAVIGHFNGKFIKTPPGAPTEPLLCKFADGGQKKR----Q 197
Query: 228 GPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 198 NPNKYIPNG---RPWHRE 212
>gi|296220517|ref|XP_002756339.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Callithrix jacchus]
Length = 400
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 146/210 (69%), Gaps = 14/210 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +Q+S+ NLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 52 GWDQISEMNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 111
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNL I+NLPL+ E +LE++L + V+STRILR
Sbjct: 112 AAQKAVSALKASGVQAQMAKQQEQDPTNLCISNLPLSMDEQELENMLKPFGQVISTRILR 171
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 172 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 228
Query: 226 AGGPNIYRGPGAEVRLWGRD-SADSQLAYE 254
PN Y G R W R+ A LAY+
Sbjct: 229 -QNPNKYIPNG---RPWHREGEAGMTLAYD 254
>gi|380793383|gb|AFE68567.1| RNA-binding motif, single-stranded-interacting protein 2, partial
[Macaca mulatta]
Length = 232
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 132/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 225
>gi|198419237|ref|XP_002125904.1| PREDICTED: similar to HrTLC2 isoform 2 [Ciona intestinalis]
Length = 434
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 143/213 (67%), Gaps = 23/213 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL+ T D+DL N+C QYG I+STKAI+D TN C+GYGFVDF+ A
Sbjct: 104 DQLSKTNLYIRGLSAATNDEDLHNLCKQYGKIVSTKAIIDPATNLCKGYGFVDFDRYDSA 163
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV+ L+ +GI AQMA+QQEQDPTNLYI+NLP N E +LE++L+ Y V+STRILRDN
Sbjct: 164 SLAVEQLKHRGIQAQMAKQQEQDPTNLYISNLPRNINEQELENMLSPYGQVISTRILRDN 223
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPG------SKEPLLVKFADSGLKKRGAGA- 226
N+ SKGVGFAR+ESK+KC+Q+I FNG L EPLL KFAD G KK
Sbjct: 224 NSVSKGVGFARMESKEKCEQIICKFNGKYLHNIAGGEQPTEPLLCKFADGGPKKNKQHQK 283
Query: 227 ---GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
GG R W RD D Q AY+ P
Sbjct: 284 FMNGG-----------RQW-RD-GDVQFAYDVP 303
>gi|74190759|dbj|BAE28173.1| unnamed protein product [Mus musculus]
Length = 355
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 25 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSA 84
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 85 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 144
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGS---TLPG---SKEPLLVKFADSGLKKR 222
+ S+GVGFAR+ES +KC+ +I FNG T PG +PLL KFAD G KKR
Sbjct: 145 SGASRGVGFARMESTEKCEAIITHFNGEYIKTPPGVAAPSDPLLCKFADGGPKKR 199
>gi|84872207|ref|NP_001034169.1| RNA-binding motif, single-stranded-interacting protein 2 isoform b
[Mus musculus]
Length = 355
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 25 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSA 84
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 85 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 144
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKR 222
+ S+GVGFAR+ES +KC+ +I FNG T PG +PLL KFAD G KKR
Sbjct: 145 SGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKR 199
>gi|84872203|ref|NP_062685.2| RNA-binding motif, single-stranded-interacting protein 2 isoform a
[Mus musculus]
gi|55976547|sp|Q8VC70.1|RBMS2_MOUSE RecName: Full=RNA-binding motif, single-stranded-interacting
protein 2
gi|18203746|gb|AAH21627.1| RNA binding motif, single stranded interacting protein 2 [Mus
musculus]
gi|26344281|dbj|BAC35797.1| unnamed protein product [Mus musculus]
gi|148692597|gb|EDL24544.1| RNA binding motif, single stranded interacting protein 2 [Mus
musculus]
Length = 383
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 53 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 113 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKR 222
+ S+GVGFAR+ES +KC+ +I FNG T PG +PLL KFAD G KKR
Sbjct: 173 SGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKR 227
>gi|114646270|ref|XP_001141536.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
isoform 2 [Pan troglodytes]
Length = 377
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 131/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYI+GL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 19 GNDQLSKTNLYIQGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 78
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQM +QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 79 AAQKAVTALKASGVQAQMVKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 138
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 139 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 195
>gi|449275376|gb|EMC84248.1| RNA-binding motif, single-stranded-interacting protein 1, partial
[Columba livia]
Length = 382
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 134/179 (74%), Gaps = 10/179 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIR L +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 31 GWDQLSKTNLYIRALPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 90
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 91 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 150
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGS--------TLPGSKEPLLVKFADSGLKKR 222
D++ TS+GVGFAR+ES +KC+ +I FNG ++P EPLL KFAD G K R
Sbjct: 151 DSSGTSRGVGFARMESTEKCEAVIAHFNGKFIKTPAGVSVPA--EPLLCKFADGGQKIR 207
>gi|395537932|ref|XP_003770942.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Sarcophilus harrisii]
Length = 260
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 51 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAA 110
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLP+ E +LE +L + V+STRILRD
Sbjct: 111 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPVTMDEQELEGMLKPFGQVISTRILRDT 170
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ TS+GVGFAR+ES +KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 171 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGQKKR 225
>gi|225706204|gb|ACO08948.1| RNA-binding motif, single-stranded-interacting protein 1 [Osmerus
mordax]
Length = 377
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 118/207 (57%), Positives = 144/207 (69%), Gaps = 14/207 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 45 GWEQLSKTNLYIRGLPPPTTDHDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 104
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LR
Sbjct: 105 AAQKAVTALKSSGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEAMLKPFGQVISTRVLR 164
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKRGAG 225
D+N S+GVGFAR+ES +KCD +I FNG + EPLL KFAD G KKR +
Sbjct: 165 DSNGGSRGVGFARMESPEKCDAVISHFNGKFIKTPPGVPAPPEPLLCKFADGGQKKRLSQ 224
Query: 226 AGGPNIYRGPGAEVRLWGRDSADSQLA 252
N + G R W RD D++LA
Sbjct: 225 ----NKFVQNG---RPWVRD-GDARLA 243
>gi|431894849|gb|ELK04642.1| RNA-binding motif, single-stranded-interacting protein 1 [Pteropus
alecto]
Length = 394
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 144/221 (65%), Gaps = 34/221 (15%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL +TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK--------------------- 207
D++ TS+GVGFAR+ES +KC+ +I FNG T PG
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSGKWRVGGMYGIRRKTKDPFVN 201
Query: 208 ---EPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
EPLL KFAD G KKR PN Y G R W R+
Sbjct: 202 APTEPLLCKFADGGQKKR----QNPNKYIPNG---RPWHRE 235
>gi|449675576|ref|XP_002163337.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Hydra magnipapillata]
Length = 373
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 135/189 (71%)
Query: 33 THPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
T PI TN + + P +++SKTNLYIRGL TTD+DL+NMC YG IISTKAIL
Sbjct: 13 TSPIFTNCMDPSVYAYDPETGDKISKTNLYIRGLHGSTTDEDLVNMCRMYGNIISTKAIL 72
Query: 93 DKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKEC 152
K +N+C+GYGFVDF++ A AV ALQ KGIHA+MA+QQEQDPTNLYI+NLP E
Sbjct: 73 HKDSNQCKGYGFVDFDNPVSAQRAVGALQSKGIHARMAKQQEQDPTNLYISNLPKQADEQ 132
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
L+ LL+ + V+STRILRD+N SK VGFAR+E+K+ C+Q+I N GS EPL +
Sbjct: 133 QLQHLLSSHGNVISTRILRDSNGESKCVGFARMETKEICEQIIAKLNNHYFDGSNEPLFI 192
Query: 213 KFADSGLKK 221
KFAD G KK
Sbjct: 193 KFADGGQKK 201
>gi|12083748|dbj|BAB20902.1| HrTLC2 [Halocynthia roretzi]
Length = 427
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/257 (48%), Positives = 155/257 (60%), Gaps = 24/257 (9%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGLT +T+D+DL+N+C QYG I+STKAI+D T+ C+GYGFVDF+ A+
Sbjct: 87 LSKTNLYIRGLTPNTSDEDLVNLCKQYGKIVSTKAIIDPQTSLCKGYGFVDFDRYESAVL 146
Query: 116 AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN 175
AV +L+ AQMA+QQEQDPTNLY++ LP NF E DLE +L Y V+STRILRD+N
Sbjct: 147 AVTSLKGTKAQAQMAKQQEQDPTNLYLSGLPPNFNEHDLEQMLLPYGQVISTRILRDSNG 206
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPG----SKEPLLVKFADSGLKKRGAGAGGPNI 231
SKGVGFAR+ESK+KC+ +I FNG L G S EPLL KFAD G KK
Sbjct: 207 VSKGVGFARMESKEKCEVIISKFNGKYLTGGNTHSTEPLLCKFADGGPKKNKQ------- 259
Query: 232 YRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQY-----QRFTAGPGGTGHIPAGYTPW 286
++ A R W RD E P PA + + R P TG Y
Sbjct: 260 HQKFMANGRTW-RDG-------EMPFPYDPAALTHNGMAPNRIMMQPYLTGPTNPAYQMQ 311
Query: 287 VPTQYVMPAPHMSQVEV 303
P ++ P P++ Q V
Sbjct: 312 APPTWMQPPPYVVQPHV 328
>gi|4730923|dbj|BAA77263.1| Scr3 [Mus musculus]
Length = 356
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 131/175 (74%), Gaps = 6/175 (3%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 53 DQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSA 112
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD
Sbjct: 113 QKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT 172
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNG---STLPG---SKEPLLVKFADSGLKKR 222
+ S+GVGFAR+ES +KC+ +I FNG T PG +PLL KFAD G KKR
Sbjct: 173 SGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCKFADGGPKKR 227
>gi|410912897|ref|XP_003969925.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like [Takifugu rubripes]
Length = 374
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 137/194 (70%), Gaps = 9/194 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD DL+ +C QYG I S KAILDKTTNKC+GYGFVDF++ A
Sbjct: 41 EQLSKTNLYIRGLPPATTDLDLVKLCHQYGKIQSAKAILDKTTNKCKGYGFVDFDNPAAA 100
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
L AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +L ++L + VVSTRILRD
Sbjct: 101 LKAVHALKTSGIQAQMAKQQEQDPTNLYISNLPLSVDEKELHNMLQPFGQVVSTRILRDY 160
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKRGAGAG 227
+ +S+GVGFAR+++ ++C +I FNG + +PLL KFADS KK G G
Sbjct: 161 SGSSRGVGFARMDTTEQCHAVISHFNGKFIKIPSGALAPSQPLLCKFADSQRKKHGHGGF 220
Query: 228 GPNIYRGPGAEVRL 241
PN G +++RL
Sbjct: 221 VPN---GQTSDLRL 231
>gi|327264367|ref|XP_003216985.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
2-like [Anolis carolinensis]
Length = 380
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 138/199 (69%), Gaps = 13/199 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A
Sbjct: 29 DQLSKTNLYIRGLHPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPTAA 88
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV AL+ G+ AQMA+QQEQDPTNLY++NLPL E +LES+L + V+STRILRD
Sbjct: 89 QKAVTALKASGVQAQMAKQQEQDPTNLYLSNLPLGMDEAELESMLKPFGQVISTRILRDA 148
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKRGAGAG 227
+ TS+GVGFAR+ES +KC+ +I FNG + +PLL KFAD G KKR
Sbjct: 149 SGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPPDPLLCKFADGGQKKR--QNQ 206
Query: 228 GPNIYRGPGAEVRLWGRDS 246
G + G R W R+S
Sbjct: 207 GKYVQNG-----RAWPRES 220
>gi|403297101|ref|XP_003939425.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Saimiri boliviensis boliviensis]
Length = 369
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 131/177 (74%), Gaps = 6/177 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP------GSKEPLLVKFADSGLKKR 222
D + TS+GVGFAR+ES +KC+ +I FNG + +PLL KFAD G KKR
Sbjct: 169 DTSGTSRGVGFARMESTEKCEAIITHFNGKYIKTPPGVPAPPDPLLCKFADGGPKKR 225
>gi|7446349|pir||S72368 single-stranded DNA-binding protein MSSP1 - human
gi|1139533|dbj|BAA11561.1| MSSP-1 [Homo sapiens]
Length = 373
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 138/200 (69%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+ST AIL KTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTNAILHKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ + +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDKQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D + TS+GVGFAR ES +KC+ + FNG T PG EPLL KF+D G KKR
Sbjct: 142 DASGTSRGVGFARTESTEKCEAVTGHFNGKFIKTPPGVSAPTEPLLCKFSDGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|225716538|gb|ACO14115.1| RNA-binding motif, single-stranded-interacting protein 1 [Esox
lucius]
Length = 376
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 135/199 (67%), Gaps = 7/199 (3%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD DL+ +C YG I+S KAILDKTTNKC+GYGFVDF+S
Sbjct: 39 GWDQLSKTNLYIRGLPPATTDLDLVKLCQPYGKIVSAKAILDKTTNKCKGYGFVDFDSPS 98
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ GI AQMA+QQEQDPTNLYI+NLP++ E +LE LL + V+STR+LR
Sbjct: 99 AAQKAVHALKTSGIQAQMAKQQEQDPTNLYISNLPVSIDEQELEGLLRPFGQVISTRVLR 158
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS------KEPLLVKFADSGLKKRGAG 225
D + S+GVGFAR+ESK+ C+ +I FNG + + EPLL KFAD K+
Sbjct: 159 DYSGASRGVGFARMESKEMCNSVIAHFNGKFIKTAHGTMAPSEPLLCKFADGQRKRHSHS 218
Query: 226 AGGPNIYRGP-GAEVRLWG 243
PN P E+RL G
Sbjct: 219 PYVPNGRTWPREGELRLGG 237
>gi|26342202|dbj|BAC34763.1| unnamed protein product [Mus musculus]
gi|148677315|gb|EDL09262.1| RNA binding motif, single stranded interacting protein, isoform
CRA_a [Mus musculus]
Length = 355
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 131/191 (68%), Gaps = 22/191 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 51 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 110
Query: 114 LAAVKALQDKGIHAQMA----------------RQQEQDPTNLYIANLPLNFKECDLESL 157
AV +L+ G+ AQMA +QQEQDPTNLYI+NLP++ E +LE++
Sbjct: 111 QKAVASLKANGVQAQMAKSSCDSVHRGNLSPHQKQQEQDPTNLYISNLPISMDEQELENM 170
Query: 158 LAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLL 211
L + V+STRILRD N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL
Sbjct: 171 LKPFGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLL 230
Query: 212 VKFADSGLKKR 222
KFAD G KKR
Sbjct: 231 CKFADGGQKKR 241
>gi|326670840|ref|XP_002667679.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like, partial [Danio rerio]
Length = 208
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 117/152 (76%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 50 GWEQLSKTNLYIRGLLPSTTDHDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 109
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL E +LE++L + VVSTRILR
Sbjct: 110 AAQKAVSALKTSGVQAQMAKQQEQDPTNLYISNLPLTMDEQELEAMLKPFGQVVSTRILR 169
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D N S+GVGFAR+ES +KC+ +I FNG L
Sbjct: 170 DTNGASRGVGFARMESTEKCEAVISHFNGKFL 201
>gi|34793|emb|CAA45923.1| 348 aa protein [Homo sapiens]
Length = 372
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 142/200 (71%), Gaps = 13/200 (6%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQ A+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQKAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAG 225
D++ TS+GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR
Sbjct: 142 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR--- 198
Query: 226 AGGPNIYRGPGAEVRLWGRD 245
PN Y G R W R+
Sbjct: 199 -QNPNKYIPNG---RPWHRE 214
>gi|47230597|emb|CAF99790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/227 (49%), Positives = 139/227 (61%), Gaps = 39/227 (17%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG EQLSKTNLYIRGL TT+ DL+ +C QYG I S KAILDKTTNKC+GYGFVDF++
Sbjct: 15 TGLEQLSKTNLYIRGLPPATTNLDLVKLCHQYGKIQSAKAILDKTTNKCKGYGFVDFDNP 74
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
AL AV AL+ GI AQMA+QQEQDPTNLYI+NLPL+ E +L ++L + VVSTRIL
Sbjct: 75 AAALKAVHALKTSGIQAQMAKQQEQDPTNLYISNLPLSVDEKELHNMLQPFGQVVSTRIL 134
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL--------------------------- 203
RD + +S+GVGFAR+++ ++C +I FNG +
Sbjct: 135 RDYSGSSRGVGFARMDTTEQCHAVISHFNGKFIKIPSGALGRNKYPLFLFPASNRRLCNC 194
Query: 204 ---------PGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRL 241
P +PLL KFADS KK G G PN G ++RL
Sbjct: 195 SLFCVSAPAPAPSQPLLCKFADSQRKKHGHGGFVPN---GQTGDLRL 238
>gi|390464467|ref|XP_002749450.2| PREDICTED: RNA-binding motif, single-stranded-interacting protein
1-like, partial [Callithrix jacchus]
Length = 213
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 55 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 114
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 115 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 174
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D++ TS+GVGFAR+ES +KC+ +I FNG +
Sbjct: 175 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFI 206
>gi|62702257|gb|AAX93183.1| unknown [Homo sapiens]
Length = 188
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 121/152 (79%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 30 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 89
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 90 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 149
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D++ TS+GVGFAR+ES +KC+ +I FNG +
Sbjct: 150 DSSGTSRGVGFARMESTEKCEAVIGHFNGKFI 181
>gi|194385720|dbj|BAG65235.1| unnamed protein product [Homo sapiens]
Length = 792
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 137/196 (69%), Gaps = 12/196 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 55 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 114
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
AV +L+ G+ AQMA+QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD
Sbjct: 115 QKAVASLKANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDA 174
Query: 174 NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG-----LKKRGAGAGG 228
N S+GVGFAR+ES +KC+ +IQ FNG L K P + A+ G L+KR G
Sbjct: 175 NGVSRGVGFARMESTEKCEVVIQHFNGKYL---KTPPGIPAAEMGCGLNKLEKRDEKRPG 231
Query: 229 PNIY---RGPGAEVRL 241
NIY + P E ++
Sbjct: 232 -NIYSTLKRPQVETKI 246
>gi|324507276|gb|ADY43089.1| RNA-binding motif, single-stranded-interacting protein 1 [Ascaris
suum]
Length = 673
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 126/173 (72%), Gaps = 6/173 (3%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LS TN+YIRGL +TTD+DL C QYG I+STKAI+DK T +C+GYGFVDFES A+
Sbjct: 297 LSSTNVYIRGLDPNTTDEDLRQKCDQYGVILSTKAIMDKATGQCKGYGFVDFESAEAAMR 356
Query: 116 AVKALQDKG-IHAQMAR----QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
AV+ L +G + AQMA+ QQEQDPTNLY ANLP NF E DL+ L ++ V+STRIL
Sbjct: 357 AVEGLNQEGKVQAQMAKVSIAQQEQDPTNLYFANLPANFTEQDLQKTLERFGMVISTRIL 416
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGS-TLPGSKEPLLVKFADSGLKKR 222
++ + S+GVGFAR++ K+ CDQ+I+ NG + S +PLLVKFADSG K +
Sbjct: 417 KNQDGASRGVGFARMDKKELCDQIIREMNGKLIINNSTQPLLVKFADSGKKPK 469
>gi|119631786|gb|EAX11381.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Homo sapiens]
gi|119631788|gb|EAX11383.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Homo sapiens]
gi|119631789|gb|EAX11384.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Homo sapiens]
gi|119631793|gb|EAX11388.1| RNA binding motif, single stranded interacting protein 1, isoform
CRA_a [Homo sapiens]
Length = 180
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/152 (62%), Positives = 120/152 (78%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 22 GWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPA 81
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILR
Sbjct: 82 AAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILR 141
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D++ TS+GVGFAR+ES +K + +I FNG +
Sbjct: 142 DSSGTSRGVGFARMESTEKWEAVIGHFNGKFI 173
>gi|308482014|ref|XP_003103211.1| CRE-TAG-310 protein [Caenorhabditis remanei]
gi|308260316|gb|EFP04269.1| CRE-TAG-310 protein [Caenorhabditis remanei]
Length = 528
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 125/178 (70%), Gaps = 6/178 (3%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+GYGFVDFES A AA
Sbjct: 209 SSTNLYIRGLAPNTNDDTLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 268
Query: 117 VKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNN 174
V L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LES L KY V+STRILR +
Sbjct: 269 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLESELNKYGMVISTRILRTPD 328
Query: 175 NTSKGVGFARLESKDKCDQMIQLFNGSTLPG-SKE--PLLVKFADSGLKKRGAGAGGP 229
N S+GVGFAR++SK+KC+ +I NG +KE LL+K AD+G K + G G P
Sbjct: 329 NNSRGVGFARMDSKEKCEVIISALNGGRFENMTKEGPALLIKQADTGRKSK-VGTGIP 385
>gi|209489428|gb|ACI49190.1| hypothetical protein Csp3_JD02.018 [Caenorhabditis angaria]
Length = 485
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q +G+P P LS TNLYIRGLT TTD L ++CS+YG I STKAI+DK TN C+G
Sbjct: 167 QRDGTPQQDNAP--LSSTNLYIRGLTPSTTDDTLRDLCSKYGNIASTKAIMDKATNHCKG 224
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L + GI AQMA+ QQEQDPTNLYIANLP F E LE+ L
Sbjct: 225 YGFVDFESPQAAQAAVDGLNNDGIQAQMAKLQQQEQDPTNLYIANLPFEFTEQMLETELN 284
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
KY V+STRILR + S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 285 KYGMVISTRILRTPDQQSRGVGFARMDSKEKCEVIISALNGGRFETMSKDAPALLIKQAD 344
Query: 217 SGLKKRGAG 225
+G K + G
Sbjct: 345 TGRKNKVGG 353
>gi|341900768|gb|EGT56703.1| CBN-SUP-26 protein [Caenorhabditis brenneri]
Length = 386
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 137/202 (67%), Gaps = 13/202 (6%)
Query: 27 GSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPI 85
GS NG G + + QH+ S TP LS TNLYIRGL +T D L MCS+YG I
Sbjct: 59 GSNNGYGRYTAPRDGQQHHDS--TP-----LSSTNLYIRGLAPNTNDDTLREMCSKYGNI 111
Query: 86 ISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIA 143
STKAI+DK+TN C+GYGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIA
Sbjct: 112 ASTKAIMDKSTNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIA 171
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
NLPL+F E LE+ L KY V+STRILR +N S+GVGFAR++SK+KC+ +I NG
Sbjct: 172 NLPLDFTEQMLETELNKYGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRF 231
Query: 204 PG-SKE--PLLVKFADSGLKKR 222
+KE LL+K AD+G K +
Sbjct: 232 ENMTKEGPSLLIKQADTGRKSK 253
>gi|392894661|ref|NP_001254905.1| Protein SUP-26, isoform p [Caenorhabditis elegans]
gi|293324781|emb|CBK55597.1| Protein SUP-26, isoform p [Caenorhabditis elegans]
Length = 293
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKRGAG 225
+G K + +G
Sbjct: 270 TGRKSKLSG 278
>gi|392894632|ref|NP_001254892.1| Protein SUP-26, isoform q [Caenorhabditis elegans]
gi|293324785|emb|CBK55601.1| Protein SUP-26, isoform q [Caenorhabditis elegans]
Length = 476
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 137/210 (65%), Gaps = 13/210 (6%)
Query: 19 HSSSSSNTGSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLIN 77
H S G+ NG G + + QH+ S TP LS TNLYIRGL +T D L
Sbjct: 114 HMRGSGPFGNSNGYGRYTAPRGDQQHHDS--TP-----LSSTNLYIRGLMPNTNDDLLRE 166
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQ 135
MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV L +G+ AQMA+ QQEQ
Sbjct: 167 MCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQ 226
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMI 195
DPTNLYIANLPL+F E LE+ L K+ V+STRILR +N S+GVGFAR++SK+KC+ +I
Sbjct: 227 DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVII 286
Query: 196 QLFNG---STLPGSKEPLLVKFADSGLKKR 222
NG T+ LL+K AD+G K +
Sbjct: 287 SALNGGRFDTMSKEGPALLIKQADTGRKSK 316
>gi|320166898|gb|EFW43797.1| Rbms1-like protein [Capsaspora owczarzaki ATCC 30864]
Length = 516
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 130/198 (65%), Gaps = 17/198 (8%)
Query: 51 TGP---EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
TGP E+LSKTN+YIRGL+ TTD D+ +MCS +G I+S KAI+D+TTN+C+GYGFV F
Sbjct: 79 TGPGMREELSKTNIYIRGLSTATTDADITSMCSVFGSILSAKAIIDRTTNQCKGYGFVMF 138
Query: 108 ESGGYALAAVKALQDKGIHAQMARQ--------QEQDPTNLYIANLPLNFKECDLESLLA 159
+ A AA+ L+ KG+ A++ QE DPTNLY +NLP E LES+L
Sbjct: 139 DQAEAASAALNTLKAKGMQVSFAKEQYNEKLKSQESDPTNLYFSNLPRTIDESFLESMLQ 198
Query: 160 KYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG 218
+ VVS+RILRD +N S+GVGFAR+E D+C+ +IQ FNG + G EPL ++ADS
Sbjct: 199 PFGKVVSSRILRDPSNGISRGVGFARMEQHDQCEAVIQRFNGGAIAGHPEPLQCRYADSA 258
Query: 219 LKKRGAGA-----GGPNI 231
+KR GGPN+
Sbjct: 259 SQKRTRSGSVGTPGGPNL 276
>gi|392894649|ref|NP_001254900.1| Protein SUP-26, isoform f [Caenorhabditis elegans]
gi|293324773|emb|CBK55589.1| Protein SUP-26, isoform f [Caenorhabditis elegans]
Length = 354
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 137/211 (64%), Gaps = 13/211 (6%)
Query: 18 THSSSSSNTGSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
H S G+ NG G + + QH+ S TP LS TNLYIRGL +T D L
Sbjct: 46 NHMRGSGPFGNSNGYGRYTAPRGDQQHHDS--TP-----LSSTNLYIRGLMPNTNDDLLR 98
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQE 134
MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV L +G+ AQMA+ QQE
Sbjct: 99 EMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQE 158
Query: 135 QDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQM 194
QDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N S+GVGFAR++SK+KC+ +
Sbjct: 159 QDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVI 218
Query: 195 IQLFNG---STLPGSKEPLLVKFADSGLKKR 222
I NG T+ LL+K AD+G K +
Sbjct: 219 ISALNGGRFDTMSKEGPALLIKQADTGRKSK 249
>gi|17554534|ref|NP_497856.1| Protein SUP-26, isoform a [Caenorhabditis elegans]
gi|3879058|emb|CAA90772.1| Protein SUP-26, isoform a [Caenorhabditis elegans]
Length = 357
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 137/211 (64%), Gaps = 13/211 (6%)
Query: 18 THSSSSSNTGSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
H S G+ NG G + + QH+ S TP LS TNLYIRGL +T D L
Sbjct: 46 NHMRGSGPFGNSNGYGRYTAPRGDQQHHDS--TP-----LSSTNLYIRGLMPNTNDDLLR 98
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQE 134
MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV L +G+ AQMA+ QQE
Sbjct: 99 EMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQE 158
Query: 135 QDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQM 194
QDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N S+GVGFAR++SK+KC+ +
Sbjct: 159 QDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVI 218
Query: 195 IQLFNG---STLPGSKEPLLVKFADSGLKKR 222
I NG T+ LL+K AD+G K +
Sbjct: 219 ISALNGGRFDTMSKEGPALLIKQADTGRKSK 249
>gi|426373094|ref|XP_004053447.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 2
[Gorilla gorilla gorilla]
Length = 355
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 118/163 (72%), Gaps = 4/163 (2%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNEQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILR
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILR 168
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
D + TS+GVGFAR+E +Q N GS +PL +F
Sbjct: 169 DTSGTSRGVGFARMEFHSVAQAGLQWCNL----GSWQPLPPRF 207
>gi|392894644|ref|NP_001254898.1| Protein SUP-26, isoform r [Caenorhabditis elegans]
gi|293324786|emb|CBK55602.1| Protein SUP-26, isoform r [Caenorhabditis elegans]
Length = 424
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 137/211 (64%), Gaps = 13/211 (6%)
Query: 18 THSSSSSNTGSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
H S G+ NG G + + QH+ S TP LS TNLYIRGL +T D L
Sbjct: 113 NHMRGSGPFGNSNGYGRYTAPRGDQQHHDS--TP-----LSSTNLYIRGLMPNTNDDLLR 165
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQE 134
MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV L +G+ AQMA+ QQE
Sbjct: 166 EMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQE 225
Query: 135 QDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQM 194
QDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N S+GVGFAR++SK+KC+ +
Sbjct: 226 QDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVI 285
Query: 195 IQLFNG---STLPGSKEPLLVKFADSGLKKR 222
I NG T+ LL+K AD+G K +
Sbjct: 286 ISALNGGRFDTMSKEGPALLIKQADTGRKSK 316
>gi|392894638|ref|NP_001254895.1| Protein SUP-26, isoform n [Caenorhabditis elegans]
gi|293324779|emb|CBK55595.1| Protein SUP-26, isoform n [Caenorhabditis elegans]
Length = 412
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 137/210 (65%), Gaps = 13/210 (6%)
Query: 19 HSSSSSNTGSQNG-GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLIN 77
H S G+ NG G + + QH+ S TP LS TNLYIRGL +T D L
Sbjct: 47 HMRGSGPFGNSNGYGRYTAPRGDQQHHDS--TP-----LSSTNLYIRGLMPNTNDDLLRE 99
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQ 135
MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV L +G+ AQMA+ QQEQ
Sbjct: 100 MCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQ 159
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMI 195
DPTNLYIANLPL+F E LE+ L K+ V+STRILR +N S+GVGFAR++SK+KC+ +I
Sbjct: 160 DPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVII 219
Query: 196 QLFNG---STLPGSKEPLLVKFADSGLKKR 222
NG T+ LL+K AD+G K +
Sbjct: 220 SALNGGRFDTMSKEGPALLIKQADTGRKSK 249
>gi|392894642|ref|NP_001254897.1| Protein SUP-26, isoform l [Caenorhabditis elegans]
gi|293324777|emb|CBK55593.1| Protein SUP-26, isoform l [Caenorhabditis elegans]
Length = 464
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKR 222
+G K +
Sbjct: 270 TGRKSK 275
>gi|392894640|ref|NP_001254896.1| Protein SUP-26, isoform m [Caenorhabditis elegans]
gi|293324778|emb|CBK55594.1| Protein SUP-26, isoform m [Caenorhabditis elegans]
Length = 438
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKR 222
+G K +
Sbjct: 270 TGRKSK 275
>gi|392894654|ref|NP_001254902.1| Protein SUP-26, isoform i [Caenorhabditis elegans]
gi|293324775|emb|CBK55591.1| Protein SUP-26, isoform i [Caenorhabditis elegans]
Length = 406
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKR 222
+G K +
Sbjct: 270 TGRKSK 275
>gi|392894652|ref|NP_001254901.1| Protein SUP-26, isoform g [Caenorhabditis elegans]
gi|293324774|emb|CBK55590.1| Protein SUP-26, isoform g [Caenorhabditis elegans]
Length = 380
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKR 222
+G K +
Sbjct: 270 TGRKSK 275
>gi|17554536|ref|NP_497855.1| Protein SUP-26, isoform b [Caenorhabditis elegans]
gi|3879059|emb|CAA90773.1| Protein SUP-26, isoform b [Caenorhabditis elegans]
Length = 409
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 8/186 (4%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
QH S T P S TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+G
Sbjct: 93 QHRASSNFNTTP---SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKG 149
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLA 159
YGFVDFES A AAV L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L
Sbjct: 150 YGFVDFESPQAAAAAVDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFAD 216
K+ V+STRILR +N S+GVGFAR++SK+KC+ +I NG T+ LL+K AD
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQAD 269
Query: 217 SGLKKR 222
+G K +
Sbjct: 270 TGRKSK 275
>gi|268575456|ref|XP_002642707.1| C. briggsae CBR-TAG-310 protein [Caenorhabditis briggsae]
Length = 402
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 121/169 (71%), Gaps = 5/169 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV
Sbjct: 106 TNLYIRGLAPNTNDDTLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 165
Query: 119 ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT 176
L +G+ AQMA+ QQEQDPTNLYIANLP++F E LE+ L KY V+STRILR +N
Sbjct: 166 GLNTEGVQAQMAKLQQQEQDPTNLYIANLPIDFTEQMLETELNKYGMVISTRILRTPDNN 225
Query: 177 SKGVGFARLESKDKCDQMIQLFNGSTLPG-SKE--PLLVKFADSGLKKR 222
S+GVGFAR++SK+KC+ +I NG SKE LL+K AD+G K +
Sbjct: 226 SRGVGFARMDSKEKCEVIISALNGGRFENMSKEGPALLIKQADTGRKSK 274
>gi|339243075|ref|XP_003377463.1| RNA-binding motif protein, single-stranded-interacting protein 3
[Trichinella spiralis]
gi|316973733|gb|EFV57292.1| RNA-binding motif protein, single-stranded-interacting protein 3
[Trichinella spiralis]
Length = 344
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/146 (62%), Positives = 114/146 (78%), Gaps = 1/146 (0%)
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDP 137
MC QYG I+STKAILDKTTN C+GYGFVDF++ A AVK+L +G AQMA+QQEQDP
Sbjct: 1 MCQQYGKIVSTKAILDKTTNLCKGYGFVDFDTPEAAERAVKSLTQQGYMAQMAKQQEQDP 60
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQL 197
TNLY+ANLP N+ E LE+LL + TVVSTRILR +N S+GVGFAR+E+++ C+ +I+
Sbjct: 61 TNLYLANLPANWNEPQLENLLKAFGTVVSTRILRYHNGASRGVGFARMETREHCENVIKE 120
Query: 198 FNGSTLPG-SKEPLLVKFADSGLKKR 222
FNG L G + +PLLVKFADSG + R
Sbjct: 121 FNGKVLTGHTGDPLLVKFADSGRRHR 146
>gi|340383573|ref|XP_003390291.1| PREDICTED: protein alan shepard-like, partial [Amphimedon
queenslandica]
Length = 443
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 127/193 (65%), Gaps = 7/193 (3%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
NGG P+ + + + P S +NLYIRGL+ + TD+DL MC +YG I STK
Sbjct: 147 NGGVGPLPIHELPEDDEPPK-------STSNLYIRGLSDNCTDEDLRKMCEKYGTINSTK 199
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNF 149
+ILDK T +C+GYGFVDF AL A+++LQ G Q AR+QE+DPTNLY++NLP +
Sbjct: 200 SILDKKTGQCKGYGFVDFSEEADALKALESLQAIGTDVQFARRQEEDPTNLYLSNLPKYY 259
Query: 150 KECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
E DLE LL+ Y ++STR+LR+ + S+GVGF RL+S++ C++ + N + PG+
Sbjct: 260 SEKDLEKLLSPYGRIISTRVLREPSGYSRGVGFVRLDSRENCEKAREALNNTIFPGTDLE 319
Query: 210 LLVKFADSGLKKR 222
L +KFADSG KR
Sbjct: 320 LNIKFADSGNYKR 332
>gi|392894636|ref|NP_001254894.1| Protein SUP-26, isoform o [Caenorhabditis elegans]
gi|293324780|emb|CBK55596.1| Protein SUP-26, isoform o [Caenorhabditis elegans]
Length = 374
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV
Sbjct: 43 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 102
Query: 119 ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT 176
L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N
Sbjct: 103 GLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQ 162
Query: 177 SKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFADSGLKKR 222
S+GVGFAR++SK+KC+ +I NG T+ LL+K AD+G K +
Sbjct: 163 SRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQADTGRKSK 211
>gi|392894634|ref|NP_001254893.1| Protein SUP-26, isoform k [Caenorhabditis elegans]
gi|293324787|emb|CBK55603.1| Protein SUP-26, isoform k [Caenorhabditis elegans]
Length = 371
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV
Sbjct: 43 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 102
Query: 119 ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT 176
L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N
Sbjct: 103 GLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQ 162
Query: 177 SKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFADSGLKKR 222
S+GVGFAR++SK+KC+ +I NG T+ LL+K AD+G K +
Sbjct: 163 SRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQADTGRKSK 211
>gi|392894647|ref|NP_001254899.1| Protein SUP-26, isoform j [Caenorhabditis elegans]
gi|293324776|emb|CBK55592.1| Protein SUP-26, isoform j [Caenorhabditis elegans]
Length = 316
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYIRGL +T D L MCS+YG I STKAI+DK TN C+GYGFVDFES A AAV
Sbjct: 43 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 102
Query: 119 ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT 176
L +G+ AQMA+ QQEQDPTNLYIANLPL+F E LE+ L K+ V+STRILR +N
Sbjct: 103 GLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQ 162
Query: 177 SKGVGFARLESKDKCDQMIQLFNG---STLPGSKEPLLVKFADSGLKKR 222
S+GVGFAR++SK+KC+ +I NG T+ LL+K AD+G K +
Sbjct: 163 SRGVGFARMDSKEKCEVIISALNGGRFDTMSKEGPALLIKQADTGRKSK 211
>gi|393912218|gb|EFO22141.2| RNA binding protein [Loa loa]
Length = 483
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 149/236 (63%), Gaps = 28/236 (11%)
Query: 11 NATSPANTHSSSSSNT----GSQNGGTHPITTNNVQHNG------SPGTPTGPEQLSKTN 60
N T P + H S N GS N GT + N ++ +G S G+P LS TN
Sbjct: 31 NFTRPQHFHGSFQQNMCNGYGSTNDGTQ--SRNGLRSSGISTRRNSTGSPV--PSLSLTN 86
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+YIRGL Q+TTD DL +MC+++G I STKAI+DKTT +C+ YGFVDFE A+ AV+ L
Sbjct: 87 VYIRGLEQNTTDDDLRDMCAKFGRIASTKAIMDKTTGQCKRYGFVDFEEAADAVRAVEGL 146
Query: 121 QDKG-IHAQMAR------------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+G + AQMA+ QQEQDPTNLY+ANLP N+ E DL+ LL Y + +ST
Sbjct: 147 NQEGKVRAQMAKALSPNNQNSLFQQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTIST 206
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNG-STLPGSKEPLLVKFADSGLKKR 222
R+L++ + +S+ VGFAR+++++ C ++I+ NG +PG PL+VK+ADS K +
Sbjct: 207 RVLKNGDGSSRCVGFARMDNEELCAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTK 262
>gi|312078882|ref|XP_003141933.1| RNA binding protein [Loa loa]
Length = 481
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 149/236 (63%), Gaps = 28/236 (11%)
Query: 11 NATSPANTHSSSSSNT----GSQNGGTHPITTNNVQHNG------SPGTPTGPEQLSKTN 60
N T P + H S N GS N GT + N ++ +G S G+P LS TN
Sbjct: 29 NFTRPQHFHGSFQQNMCNGYGSTNDGTQ--SRNGLRSSGISTRRNSTGSPV--PSLSLTN 84
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+YIRGL Q+TTD DL +MC+++G I STKAI+DKTT +C+ YGFVDFE A+ AV+ L
Sbjct: 85 VYIRGLEQNTTDDDLRDMCAKFGRIASTKAIMDKTTGQCKRYGFVDFEEAADAVRAVEGL 144
Query: 121 QDKG-IHAQMAR------------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+G + AQMA+ QQEQDPTNLY+ANLP N+ E DL+ LL Y + +ST
Sbjct: 145 NQEGKVRAQMAKALSPNNQNSLFQQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTIST 204
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNG-STLPGSKEPLLVKFADSGLKKR 222
R+L++ + +S+ VGFAR+++++ C ++I+ NG +PG PL+VK+ADS K +
Sbjct: 205 RVLKNGDGSSRCVGFARMDNEELCAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTK 260
>gi|170581784|ref|XP_001895836.1| RNA binding protein [Brugia malayi]
gi|158597095|gb|EDP35323.1| RNA binding protein, putative [Brugia malayi]
Length = 479
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 149/236 (63%), Gaps = 28/236 (11%)
Query: 11 NATSPANTHSSSSSNT----GSQNGGTHPITTNNVQHNG------SPGTPTGPEQLSKTN 60
N T P + H S N GS N GT + N ++ +G S G+P LS TN
Sbjct: 31 NFTRPQHFHGSFQQNMCNGYGSTNEGTQ--SRNGLRSSGISTRRNSTGSPV--PSLSLTN 86
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+YIRGL Q+TTD+DL +MC+++G I STKAI+DK T +C+ YGFVDFE AL AV+ L
Sbjct: 87 VYIRGLEQNTTDEDLRDMCAKFGRIASTKAIMDKATGQCKRYGFVDFEEAADALRAVEGL 146
Query: 121 QDKG-IHAQMAR------------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+G + AQMA+ QQEQDPTNLY+ANLP N+ E DL+ LL Y + +ST
Sbjct: 147 NQEGKVRAQMAKALSPNNQNSLFQQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTIST 206
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNG-STLPGSKEPLLVKFADSGLKKR 222
R+L++ + +S+ VGFAR+++++ C ++I+ NG +PG PL+VK+ADS K +
Sbjct: 207 RVLKNGDGSSRCVGFARMDNEELCAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTK 262
>gi|410911798|ref|XP_003969377.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Takifugu rubripes]
Length = 435
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 112/156 (71%), Gaps = 6/156 (3%)
Query: 81 QYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNL 140
+YG I+STKAILDK TN+C+GYGFVDF+S A AV +L+ G+ AQMA+QQEQDPTNL
Sbjct: 77 EYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVSSLKATGVQAQMAKQQEQDPTNL 136
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
YI+NLP++ E +LE++L V+STRILRD N S+GVGFAR+ES +KC+ +IQ FNG
Sbjct: 137 YISNLPVSMDEQELENMLKPLGHVISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNG 196
Query: 201 STL------PGSKEPLLVKFADSGLKKRGAGAGGPN 230
L P EPLL KFAD G KKR + + P
Sbjct: 197 KYLKTPPGIPAPTEPLLCKFADGGQKKRQSQSKYPQ 232
>gi|313227418|emb|CBY22565.1| unnamed protein product [Oikopleura dioica]
Length = 373
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 120/182 (65%), Gaps = 13/182 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+LS+TNLYIRGL+ +T D+DL MC ++G I+STKAI+D KC+GYGFVDFE A
Sbjct: 64 EKLSETNLYIRGLSAETKDEDLHKMCERFGKIVSTKAIVDNENGKCKGYGFVDFEDPENA 123
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD- 172
AA ++L + GI Q A++QE+DPTN+Y +NLP + L +L Y V+STRILR
Sbjct: 124 RAAKESLAEDGIQIQFAKKQEEDPTNIYFSNLPEWISDKSLRDMLEPYGEVISTRILRHP 183
Query: 173 -----NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK-------EPLLVKFADSGLK 220
N SKGVGFAR+ K++C+++I FNG L K +PLLVKFAD G K
Sbjct: 184 GSPGTNEGRSKGVGFARMHGKEQCEKVISKFNGHPLTDPKNPTKPSGKPLLVKFADGGQK 243
Query: 221 KR 222
K+
Sbjct: 244 KK 245
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 126 HAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFAR 184
H ++ TNLYI L K+ DL + ++ +VST+ + DN N KG GF
Sbjct: 57 HDHHGHHEKLSETNLYIRGLSAETKDEDLHKMCERFGKIVSTKAIVDNENGKCKGYGFVD 116
Query: 185 LESKDKC 191
E +
Sbjct: 117 FEDPENA 123
>gi|167515738|ref|XP_001742210.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778834|gb|EDQ92448.1| predicted protein [Monosiga brevicollis MX1]
Length = 517
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 112/183 (61%), Gaps = 14/183 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ LS TN+YI GL TTD+DL +C YGPIIS K+I+D+ +N C+GYGFV FE A
Sbjct: 128 QPLSTTNIYISGLKPATTDEDLKLLCQSYGPIISAKSIIDRNSNLCKGYGFVMFERESSA 187
Query: 114 LAAVKALQDKGI---HAQMARQQEQ-------DPTNLYIANLPLNFKECDLESLLAKYVT 163
AA+ L + G+ HA++++ Q + DPTNLYIAN+P KE DL L + T
Sbjct: 188 KAALTGLTNMGVQAAHARVSKAQLEIQGRIPIDPTNLYIANIPYGMKEQDLADTLVRAAT 247
Query: 164 ----VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGL 219
V+S R+LR+ S+GV AR++S D C +I+ NG LPG+ EPL VK A+
Sbjct: 248 GRGEVLSCRVLRNEYGQSRGVALARMDSPDACTAVIRNLNGLPLPGAHEPLRVKHANGPT 307
Query: 220 KKR 222
+R
Sbjct: 308 ARR 310
>gi|402580945|gb|EJW74894.1| hypothetical protein WUBG_14199, partial [Wuchereria bancrofti]
Length = 271
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 109/159 (68%), Gaps = 14/159 (8%)
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKG-IHAQMAR----- 131
MC+++G I STKAI+DKTT +C+ YGFVDFE AL AV+ L +G + AQMA+
Sbjct: 1 MCAKFGRIASTKAIMDKTTGQCKRYGFVDFEEAADALRAVEGLNQEGKVRAQMAKALSPN 60
Query: 132 -------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFAR 184
QQEQDPTNLY+ANLP N+ E DL+ LL Y + +STR+L++ + +S+ VGFAR
Sbjct: 61 NQNSLFQQQEQDPTNLYLANLPPNYTERDLQKLLESYGSTISTRVLKNGDGSSRCVGFAR 120
Query: 185 LESKDKCDQMIQLFNG-STLPGSKEPLLVKFADSGLKKR 222
+++++ C ++I+ NG +PG PL+VK+ADS K +
Sbjct: 121 MDNEELCAKIIKEMNGKKIIPGCNLPLMVKYADSNKKTK 159
>gi|384491739|gb|EIE82935.1| hypothetical protein RO3G_07640 [Rhizopus delemar RA 99-880]
Length = 451
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 104/176 (59%), Gaps = 14/176 (7%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y+RGL TD+ + MC +YG + S+KAI+D+ T +C+GYGF FE A++
Sbjct: 177 NIYVRGLPSSITDESFLEMCQEYGTVSSSKAIIDQKTGECKGYGFAMFEDEKNCEEAIEG 236
Query: 120 LQDKGIHAQMAR------------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
L G A A+ Q++ TN+YI+NLPL+ E LE L Y T VS+
Sbjct: 237 LNKAGYQASYAKVGQESFSSRLRHLQDETSTNIYISNLPLDVNEEKLEELFLPYQT-VSS 295
Query: 168 RILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RILRD + S+GVGFAR+ ++ +I+ FNG ++ GS PL V+FADS +K+
Sbjct: 296 RILRDPQSGISRGVGFARMSERNAATAIIERFNGHSIEGSSAPLQVRFADSPAQKK 351
>gi|19112839|ref|NP_596047.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe 972h-]
gi|158564269|sp|Q2L4W6.1|SPO5_SCHPO RecName: Full=Sporulation-specific protein 5; AltName: Full=Meiotic
RNA-binding protein 1; AltName: Full=Meiotically
up-regulated gene 12 protein
gi|5051491|emb|CAB44770.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe]
gi|86197907|dbj|BAE78593.1| meiotic RNA-binding protein 1 [Schizosaccharomyces pombe]
Length = 567
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 20/199 (10%)
Query: 54 EQLSKT-NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
E S+T N+YIRGL +T+D++L+ +++G + S+KAI+D TN C+GYGF FE
Sbjct: 290 ESTSRTRNVYIRGLPPNTSDENLLLYTNRFGKVSSSKAIIDMETNLCKGYGFACFEEEKS 349
Query: 113 ALAAVKALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVT 163
AL + A+ G A++ Q+ + TNLYI+NLPL++ E D+ +L K
Sbjct: 350 ALICISAMTLCGYQCSFAKESFSARLQSLQDTESTNLYISNLPLHWNESDISTLF-KPSK 408
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
++S R+LRD+ S+GVGFAR++ + + +I FN L + PL ++FADS +K+
Sbjct: 409 IISNRVLRDSKEQSRGVGFARMQDRKTAEDIINKFNNFVLDPALPPLQIRFADSTDQKK- 467
Query: 224 AGAGGPNIYRGPGAEVRLW 242
++G + RLW
Sbjct: 468 --------FKGQTQKRRLW 478
>gi|384490634|gb|EIE81856.1| hypothetical protein RO3G_06561 [Rhizopus delemar RA 99-880]
Length = 420
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 102/176 (57%), Gaps = 14/176 (7%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y+RGL TD + MC YG + S+KAI+D+ +C+GYGF FE+ A++
Sbjct: 191 NIYVRGLPSTITDGAFLEMCQAYGTVSSSKAIIDQKLGECKGYGFAMFENEKDCEEAIEG 250
Query: 120 LQDKGIHAQMARQ------------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
L G A A+ Q++ TN+YI+NLPL+ E LE L + Y T +S+
Sbjct: 251 LNKSGFQASYAKVGQESFSSRLRHLQDETSTNIYISNLPLDITEEKLEVLFSPYQT-ISS 309
Query: 168 RILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RILRD + S+GVGFAR+ ++ +I+ FNG + GS PL V+FADS +K+
Sbjct: 310 RILRDPQSGISRGVGFARMTDREAASAIIEKFNGYVIEGSSAPLQVRFADSPAQKK 365
>gi|213409235|ref|XP_002175388.1| sporulation-specific protein [Schizosaccharomyces japonicus yFS275]
gi|212003435|gb|EEB09095.1| sporulation-specific protein [Schizosaccharomyces japonicus yFS275]
Length = 619
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 19/192 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL +T+D+ L+ ++G I S+KAI+D N C+GYGF F+ A +
Sbjct: 331 NVYIRGLPPNTSDELLLMYVQRFGLIESSKAIIDINNNTCKGYGFACFQKQEDAYLCIAC 390
Query: 120 LQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ G A++ Q++D TNLYI+NLP ++ E D+ LL VVS R+L
Sbjct: 391 MSLCGYQCSFAKESFSSRLKSLQDRDSTNLYISNLPPDWTEDDILKLLNSE-KVVSVRVL 449
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPN 230
RDNNN S+GVGFAR++ +D ++ I+ FNG + LL++FADS +K
Sbjct: 450 RDNNNRSRGVGFARMQDRDTAEKTIEEFNGHIISQELPQLLIRFADSPEQKS-------- 501
Query: 231 IYRGPGAEVRLW 242
++G + R+W
Sbjct: 502 -FKGRTQKRRMW 512
>gi|34784432|gb|AAH56609.1| Rbms1 protein, partial [Mus musculus]
Length = 298
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 13/133 (9%)
Query: 119 ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSK 178
AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STR+LRD++ S+
Sbjct: 1 ALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRVLRDSSGASR 60
Query: 179 GVGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAGAGGPNIY 232
GVGFAR+ES +KC+ +I FNG T PG EPLL KFAD G KKR PN Y
Sbjct: 61 GVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR----QNPNKY 116
Query: 233 RGPGAEVRLWGRD 245
G R W RD
Sbjct: 117 IPNG---RPWPRD 126
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L NM +G +IST+ + D ++ RG GF ES A +
Sbjct: 20 TNLYISNLPLSMDEQELENMLKPFGQVISTRVLRD-SSGASRGVGFARMESTEKCEAVIG 78
Query: 119 ALQDKGI 125
K I
Sbjct: 79 HFNGKFI 85
>gi|221042792|dbj|BAH13073.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 70/87 (80%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G +QLSKTNLYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S
Sbjct: 49 GNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPS 108
Query: 112 YALAAVKALQDKGIHAQMARQQEQDPT 138
A AV AL+ G+ AQMA+QQEQDPT
Sbjct: 109 AAQKAVTALKASGVQAQMAKQQEQDPT 135
>gi|453081617|gb|EMF09666.1| hypothetical protein SEPMUDRAFT_151601 [Mycosphaerella populorum
SO2202]
Length = 611
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q +TN+YIRGL +TTD+ L + S++G I S+K+I+D T C+G+GFV + + A
Sbjct: 298 QRGETNVYIRGLLPETTDEMLESWGSRFGDIKSSKSIIDLNTGLCKGFGFVKYHNYEDAE 357
Query: 115 AAVKALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVV 165
++ G AR+ ++ TNLY++NLP + E +L +L + V
Sbjct: 358 NCIRGFHYLGYEVSFARESFYSKLKTFSDEANTNLYVSNLPKSMNEHELANLFQPH-KVC 416
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV--KFADSGLKK 221
S+RILRD N +GVGFAR E++D C+++I++FN T+ + E L V ++AD+ +K
Sbjct: 417 SSRILRDKNGNGRGVGFARFETRDVCEEVIKIFNNHTINTAGEELQVQIRYADTQEQK 474
>gi|345570637|gb|EGX53458.1| hypothetical protein AOL_s00006g324 [Arthrobotrys oligospora ATCC
24927]
Length = 463
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 16/186 (8%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TN+YI+GL + TTDK L+ M S +G +IS+KAI+D+ + C+GYGF F S A A
Sbjct: 211 SPTNVYIKGLPESTTDKQLLEMVSPFGEVISSKAIIDRPSGSCKGYGFAKFASVESAKAC 270
Query: 117 VKALQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
++ L+ + A +A+ + TNLY++NLP N+ E + SL Y +
Sbjct: 271 IEDLKSRSYEATVAKDSFYSKLKGLADLRSTNLYVSNLPTNWNENKIISLFPGY-KISKC 329
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE--PLLVKFADS----GLKK 221
R+L S+GV F E +D CD++I+ F+G L PL V++AD+ LKK
Sbjct: 330 RLLVSQRAQSRGVAFVTFEDRDVCDEVIEKFSGLQLHEKNHHLPLQVRYADTIAQKQLKK 389
Query: 222 RGAGAG 227
G
Sbjct: 390 EQQAVG 395
>gi|340960295|gb|EGS21476.1| hypothetical protein CTHT_0033340 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 505
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL T D+ L+ S++G + +KAI+D +T C+G+GF F G
Sbjct: 244 NVYIRGLHPTTDDELLLKYASRFGKVEQSKAIIDTSTGACKGFGFAKFADVRDSEKCIRG 303
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
Y L + +A++ + ++ TNLY++NLP E +L ++ A Y VVS++IL
Sbjct: 304 FYYLGYEVGFARESFNARLKAEGDETSTNLYLSNLPKRLNEAELNAIFAGY-RVVSSKIL 362
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++++C+ +I+ F+G+ + + V++AD+ +K
Sbjct: 363 RDSMGNSRGVGFARFETREECEDIIKKFHGAAIGEEGLLMQVRYADTPAQK 413
>gi|400598754|gb|EJP66461.1| sporulation-specific protein [Beauveria bassiana ARSEF 2860]
Length = 542
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + S++G + ++KAI+D T C+G+GF F + + ++
Sbjct: 247 NVYIRGLHPTTDDELLFHFASRFGAVETSKAIIDTGTGACKGFGFAKFFTCEDSEMCIRG 306
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L ++ Y T++S++IL
Sbjct: 307 FHKLGYEVGFARESFNSRLKAEGDEASTNLYISNLPKSLTEVELGTIFLGY-TILSSKIL 365
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR E++D CD++I+ FNG + +E LL +++AD+ +K
Sbjct: 366 RDSMGNSRGVGFARFETRDVCDEIIRKFNGVGI--GEEGLLMNIRYADTPSQK 416
>gi|47215434|emb|CAG05721.1| unnamed protein product [Tetraodon nigroviridis]
Length = 278
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 73/107 (68%), Gaps = 6/107 (5%)
Query: 129 MARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESK 188
M QQEQDPTNLYI+NLP++ E +LE++L V+STRILRD N S+GVGFAR+ES
Sbjct: 12 MVEQQEQDPTNLYISNLPVSMDEQELENMLKPLGHVISTRILRDANGVSRGVGFARMEST 71
Query: 189 DKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAGGP 229
+KC+ +IQ FNG L P EPLL KFAD G KKR + + P
Sbjct: 72 EKCEVVIQHFNGKYLKTPPGIPAPTEPLLCKFADGGQKKRQSQSKYP 118
>gi|221045066|dbj|BAH14210.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 72/100 (72%), Gaps = 6/100 (6%)
Query: 129 MARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESK 188
MA+QQEQDPTNLYI+NLPL+ E +LE +L + V+STRILRD + TS+GVGFAR+ES
Sbjct: 1 MAKQQEQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRDTSGTSRGVGFARMEST 60
Query: 189 DKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+KC+ +I FNG + P +PLL KFAD G KKR
Sbjct: 61 EKCEAIITHFNGKYIKTPPGVPAPSDPLLCKFADGGPKKR 100
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L M +G +IST+ IL T+ RG GF ES A +
Sbjct: 10 TNLYISNLPLSMDEQELEGMLKPFGQVISTR-ILRDTSGTSRGVGFARMESTEKCEAIIT 68
Query: 119 ALQDKGI 125
K I
Sbjct: 69 HFNGKYI 75
>gi|116196114|ref|XP_001223869.1| hypothetical protein CHGG_04655 [Chaetomium globosum CBS 148.51]
gi|88180568|gb|EAQ88036.1| hypothetical protein CHGG_04655 [Chaetomium globosum CBS 148.51]
Length = 551
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL T D+ L S++G + +KAI+D +T C+G+GF F G
Sbjct: 257 NVYIRGLHPTTDDELLHRYASRFGKVEQSKAIIDTSTGACKGFGFAKFADVRDSEKCIRG 316
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
Y L + +A++ + ++ TNLY++NLP E +L ++ A Y VVS++IL
Sbjct: 317 FYHLGYEVGFARESFNARLKAEGDELSTNLYLSNLPKRLNESELNAIFAGY-HVVSSKIL 375
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++D+C+ +I+ ++G+++ + V++AD+ +K
Sbjct: 376 RDSMGNSRGVGFARFETRDECEDIIKKYHGASIGEEGMLMQVRYADTPAQK 426
>gi|281345826|gb|EFB21410.1| hypothetical protein PANDA_010935 [Ailuropoda melanoleuca]
Length = 303
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 6/97 (6%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD N S+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 61 EVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 97
>gi|171690500|ref|XP_001910175.1| hypothetical protein [Podospora anserina S mat+]
gi|170945198|emb|CAP71309.1| unnamed protein product [Podospora anserina S mat+]
Length = 569
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 60 NLYIRGLTQDTTDKDLIN-MCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
N+YIRGL TTD DL++ S++G + +KAI+D T C+G+GF F
Sbjct: 268 NVYIRGL-HPTTDDDLLHRYASRFGTVEQSKAIIDTATGACKGFGFAKFADVRDSEKCIR 326
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G Y L + +A++ + ++ TNLY++NLP E +L ++ Y VVS++I
Sbjct: 327 GFYHLGYEVGFARESFNARLKAEGDEGSTNLYLSNLPKRLNESELNAIFTGY-HVVSSKI 385
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
LRD+ S+GVGFAR ES+++C+Q+I+ ++G+++ + V++AD+ +K
Sbjct: 386 LRDSMGNSRGVGFARFESREECEQIIKQYHGASIGDEGMLMQVRYADTPAQK 437
>gi|301773182|ref|XP_002922010.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like, partial [Ailuropoda melanoleuca]
Length = 319
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 6/97 (6%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD N S+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 61 EVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 97
>gi|431919421|gb|ELK17940.1| RNA-binding motif, single-stranded-interacting protein 3, partial
[Pteropus alecto]
Length = 326
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 6/97 (6%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD N S+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 61 EVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 97
>gi|402861781|ref|XP_003895259.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Papio anubis]
Length = 355
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 6/97 (6%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD N S+GVGFAR+ES +KC
Sbjct: 39 QQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARMESTEKC 98
Query: 192 DQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 99 EVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 135
>gi|336263631|ref|XP_003346595.1| hypothetical protein SMAC_04768 [Sordaria macrospora k-hell]
gi|380090490|emb|CCC11786.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 552
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL T D L+ S++G + +KAI+D +T C+G+GF F + G
Sbjct: 256 NVYIRGLHPTTDDDLLLRYASRFGKVEQSKAIIDTSTGACKGFGFAKFANVRDSERCIRG 315
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
Y L + +A++ + ++ TNLY++NLP E +L ++ Y +VS++IL
Sbjct: 316 FYHLGYEVGFARESFNARLKAEGDEASTNLYLSNLPKRLTEAELNAIFVGY-HIVSSKIL 374
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++D+C+ +I+ F+G+ + + V++AD+ +K
Sbjct: 375 RDSMGNSRGVGFARFETRDECEDVIKKFHGAPIGEEGMLMQVRYADTPAQK 425
>gi|85112972|ref|XP_964444.1| hypothetical protein NCU09742 [Neurospora crassa OR74A]
gi|28926226|gb|EAA35208.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 552
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L+ S++G + +KAI+D +T C+G+GF F + + ++
Sbjct: 256 NVYIRGLHPTTDDELLLRYASRFGKVEQSKAIIDTSTGACKGFGFAKFANVRDSEKCIRG 315
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLY++NLP E +L ++ Y +VS++IL
Sbjct: 316 FHHLGYEVGFARESFNARLKAEGDESSTNLYLSNLPKRLTEAELNAIFVGY-HIVSSKIL 374
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++D+C+ +I+ F+G+ + + V++AD+ +K
Sbjct: 375 RDSMGNSRGVGFARFETRDECEDVIKKFHGAPIGEEGMLMQVRYADTPAQK 425
>gi|336470829|gb|EGO58990.1| hypothetical protein NEUTE1DRAFT_136071 [Neurospora tetrasperma
FGSC 2508]
gi|350291896|gb|EGZ73091.1| hypothetical protein NEUTE2DRAFT_60694 [Neurospora tetrasperma FGSC
2509]
Length = 552
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L+ S++G + +KAI+D +T C+G+GF F + + ++
Sbjct: 256 NVYIRGLHPTTDDELLLRYASRFGKVEQSKAIIDTSTGACKGFGFAKFANVRDSEKCIRG 315
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLY++NLP E +L ++ Y +VS++IL
Sbjct: 316 FHHLGYEVGFARESFNARLKAEGDESSTNLYLSNLPKRLTEAELNAIFVGY-HIVSSKIL 374
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++D+C+ +I+ F+G+ + + V++AD+ +K
Sbjct: 375 RDSMGNSRGVGFARFETRDECEDVIKKFHGAPIGEEGMLMQVRYADTPAQK 425
>gi|301624661|ref|XP_002941619.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like, partial [Xenopus (Silurana) tropicalis]
Length = 286
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 78/120 (65%), Gaps = 13/120 (10%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD + S+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDASGVSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNGSTL------PGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
+ +IQ FNG L P EPLL KFAD G KKR P+ Y G R W R+
Sbjct: 61 EVVIQHFNGKYLKTPPGVPAPSEPLLCKFADGGQKKR----QNPSKYTQNG---RPWPRE 113
>gi|195175680|ref|XP_002028556.1| GL15344 [Drosophila persimilis]
gi|194104886|gb|EDW26929.1| GL15344 [Drosophila persimilis]
Length = 109
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 63/76 (82%), Gaps = 2/76 (2%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNLYIRGL Q TTDKDL+NMC+QYG IISTKAILDKTTNKC YGFVDFE +A
Sbjct: 18 LSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKC--YGFVDFEQPAFAEC 75
Query: 116 AVKALQDKGIHAQMAR 131
AVK LQ KG+ AQMA+
Sbjct: 76 AVKGLQGKGVQAQMAK 91
>gi|156049795|ref|XP_001590864.1| hypothetical protein SS1G_08605 [Sclerotinia sclerotiorum 1980]
gi|154693003|gb|EDN92741.1| hypothetical protein SS1G_08605 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 618
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL +T D+ L +++G + ++KAI+D T C+G+GF + ++ ++
Sbjct: 303 NVYIRGLHPNTDDETLAQYAARFGKVETSKAIIDTATGACKGFGFAKYFDVRHSELCIRG 362
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ G AR+ ++ TNLY++NLP E +L ++ Y V S+RIL
Sbjct: 363 FWELGYEVGFARESFNARLKAEGDEASTNLYVSNLPKTMTESELGAIFMDY-KVSSSRIL 421
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ N S+GVGFAR E++D C+++I+ F+G + L V++AD+ +K
Sbjct: 422 RDSQNHSRGVGFARFENRDVCEEIIRKFHGQPIGEEGLLLQVRYADTPAQK 472
>gi|302406835|ref|XP_003001253.1| sporulation-specific protein [Verticillium albo-atrum VaMs.102]
gi|261359760|gb|EEY22188.1| sporulation-specific protein [Verticillium albo-atrum VaMs.102]
Length = 540
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + +++G + ++KAI+D +T C+G+GF F + ++
Sbjct: 242 NVYIRGLHPTTDDELLFHYAARFGDVETSKAIIDTSTGACKGFGFAKFYDARDSEVCIRG 301
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L ++ Y T++S++IL
Sbjct: 302 FHRLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKSLTEVELGAIFMGY-TILSSKIL 360
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR ES+D CD++I+ +NG + + +++AD+ +K
Sbjct: 361 RDSMGNSRGVGFARFESRDVCDEVIKEYNGIGVGDEGLLMNIRYADTPSQK 411
>gi|410971568|ref|XP_003992239.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein 3
[Felis catus]
Length = 499
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 6/103 (5%)
Query: 126 HAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARL 185
++ QQEQDPTNLYI+NLP++ E +LE++L + V+STRILRD N S+GVGFAR+
Sbjct: 187 QVRITLQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRILRDANGVSRGVGFARM 246
Query: 186 ESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADSGLKKR 222
ES +KC+ +IQ FNG L P EPLL KFAD G KKR
Sbjct: 247 ESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADGGQKKR 289
>gi|4432958|dbj|BAA19555.1| MSSP-2 [Homo sapiens]
Length = 285
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 88/141 (62%), Gaps = 18/141 (12%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILRD++ TS+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
+ +I FNG T PG EPLL KFAD G KKR PN Y G R W R+
Sbjct: 61 EAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR----QNPNKYIPNG---RPWHRE 113
Query: 246 -SADSQLAYEHPMTPIPATIQ 265
A L Y+ P A IQ
Sbjct: 114 GEAGMTLTYD----PTTAAIQ 130
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L NM +G +IST+ IL ++ RG GF ES A +
Sbjct: 7 TNLYISNLPLSMDEQELENMLKPFGQVISTR-ILRDSSGTSRGVGFARMESTEKCEAVIG 65
Query: 119 ALQDKGI 125
K I
Sbjct: 66 HFNGKFI 72
>gi|378732851|gb|EHY59310.1| hypothetical protein HMPREF1120_07302 [Exophiala dermatitidis
NIH/UT8656]
Length = 610
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 23/248 (9%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+YIRG DT+D+DL S++G I S KAI+++ T KC+G+GFV + S A ++
Sbjct: 277 TNVYIRGFMPDTSDEDLERWASRFGEIESCKAIIEQDTGKCKGFGFVMYYSPAAAENCIR 336
Query: 119 ALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G A A++ ++++ TN+Y +P+++ E DL Y VST+I
Sbjct: 337 GFFHLGFQASYAQKSRNSRLKDLEDKNSTNIYCTGVPIDWNESDLAKHFLPY-HAVSTKI 395
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
RD + SK VGFAR E++D +++I+ F+ L ++FAD+ +K+
Sbjct: 396 CRDVPSGVSKEVGFARFETRDIAERVIKEFHSVMTEHDGVKLFLRFADTKAQKQ------ 449
Query: 229 PNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYT-PWV 287
+ E R W S + + EH +P +Q PGG+ PAG + +
Sbjct: 450 ---LKQQSQERRNW--RSREYSYSVEHTPSPTLTRLQGMNNHISPGGSYQSPAGTSNAFT 504
Query: 288 PTQYVMPA 295
P V PA
Sbjct: 505 PATSVSPA 512
>gi|330915721|ref|XP_003297139.1| hypothetical protein PTT_07453 [Pyrenophora teres f. teres 0-1]
gi|311330343|gb|EFQ94765.1| hypothetical protein PTT_07453 [Pyrenophora teres f. teres 0-1]
Length = 575
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 106/176 (60%), Gaps = 13/176 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+YIRGL +TTD+ L ++G I S+K+I+D T+ C+G+GF+ + + A +
Sbjct: 282 ETNVYIRGLLPETTDEMLHMWGKRFGDIQSSKSIIDLKTSLCKGFGFIKYHNFEDAEDCI 341
Query: 118 KALQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ G AR+ ++ TNLY++N+P N E +L + A + V S+R
Sbjct: 342 RGFHYLGYEVSFARESFYSKLKKFADEANTNLYVSNIPKNMNEHELAGIFAPH-KVCSSR 400
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP--GSKEPLL-VKFADSGLKK 221
ILRD + T +GVGFAR +++D CD++I+ FN + + G +E L+ ++F+D+ +K
Sbjct: 401 ILRDPSGTGRGVGFARFDTRDICDEVIKEFNNTPVSKTGGEEHLIQIRFSDTHEQK 456
>gi|4432957|dbj|BAA19554.1| MSSP-2 [Homo sapiens]
Length = 288
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 80/120 (66%), Gaps = 13/120 (10%)
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILRD++ TS+GVGFAR+ES +KC
Sbjct: 1 QQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKC 60
Query: 192 DQMIQLFNG---STLPGSK---EPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
+ +I FNG T PG EPLL KFAD G KKR PN Y G R W R+
Sbjct: 61 EAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKR----QNPNKYIPNG---RPWHRE 113
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L NM +G +IST+ IL ++ RG GF ES A +
Sbjct: 7 TNLYISNLPLSMDEQELENMLKPFGQVISTR-ILRDSSGTSRGVGFARMESTEKCEAVIG 65
Query: 119 ALQDKGI 125
K I
Sbjct: 66 HFNGKFI 72
>gi|322706684|gb|EFY98264.1| RNA binding protein MSSP-2 [Metarhizium anisopliae ARSEF 23]
Length = 542
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L S++GP+ ++KAI+D T C+G+GF F + ++
Sbjct: 247 NVYIRGLHPTTDDELLYKFASRFGPVETSKAIIDTGTGACKGFGFAKFFDSQDSEMCIRG 306
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP E +L ++ T++S++IL
Sbjct: 307 FHRLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKTLTEVELGTIFLG-TTILSSKIL 365
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR ES++ CD++I+ +NG + +E LL +++AD+ +K
Sbjct: 366 RDSMGNSRGVGFARFESREICDEIIKKYNGVGI--GEEGLLMNIRYADTPAQK 416
>gi|159163572|pdb|1X5O|A Chain A, Solution Structure Of Rrm Domain In Rna Binding Motif,
Single-Stranded Interacting Protein 1
Length = 114
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 6/102 (5%)
Query: 120 LQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKG 179
L+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L + V+STRILRD++ TS+G
Sbjct: 8 LKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRG 67
Query: 180 VGFARLESKDKCDQMIQLFNG---STLPGSK---EPLLVKFA 215
VGFAR+ES +KC+ +I FNG T PG EPLL KF+
Sbjct: 68 VGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFS 109
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L NM +G +IST+ IL ++ RG GF ES A +
Sbjct: 26 TNLYISNLPLSMDEQELENMLKPFGQVISTR-ILRDSSGTSRGVGFARMESTEKCEAVIG 84
Query: 119 ALQDKGI 125
K I
Sbjct: 85 HFNGKFI 91
>gi|322700960|gb|EFY92712.1| RNA binding protein MSSP-2 [Metarhizium acridum CQMa 102]
Length = 553
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L S++GP+ ++KAI+D T C+G+GF F + ++
Sbjct: 265 NVYIRGLHPTTDDELLYKFASRFGPVETSKAIIDTGTGACKGFGFAKFFDSQDSEMCIRG 324
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP E +L ++ T++S++IL
Sbjct: 325 FHRLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKTLTEVELGTIFLG-TTILSSKIL 383
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR ES++ CD++I+ +NG + +E LL +++AD+ +K
Sbjct: 384 RDSMGNSRGVGFARFESREICDEIIKKYNGVGI--GEEGLLMNIRYADTPAQK 434
>gi|367045580|ref|XP_003653170.1| hypothetical protein THITE_2043348 [Thielavia terrestris NRRL 8126]
gi|347000432|gb|AEO66834.1| hypothetical protein THITE_2043348 [Thielavia terrestris NRRL 8126]
Length = 548
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 60 NLYIRGLTQDTTDKDLIN-MCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
N+YIRGL TTD DL++ S++G + +KAI+D +T C+G+GF F
Sbjct: 256 NVYIRGL-HPTTDDDLLHRYASRFGKVEQSKAIIDTSTGACKGFGFAKFADVRDSEKCIR 314
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G Y L + +A++ + + TNLY++NLP E +L ++ A Y VVS++I
Sbjct: 315 GFYHLGYEVGFARESFNARLKAEGDDTSTNLYLSNLPKRLNESELNAIFAGY-HVVSSKI 373
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
LRD+ S+GVGFAR E++++C+ +I+ ++G+++ + V++AD+ +K
Sbjct: 374 LRDSMGNSRGVGFARFETREECEDIIKKYHGASIGEEGMLMQVRYADTPAQK 425
>gi|367022426|ref|XP_003660498.1| hypothetical protein MYCTH_97707 [Myceliophthora thermophila ATCC
42464]
gi|347007765|gb|AEO55253.1| hypothetical protein MYCTH_97707 [Myceliophthora thermophila ATCC
42464]
Length = 548
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL T D L S++G + +KAI+D +T C+G+GF F G
Sbjct: 253 NVYIRGLHPTTDDDLLYRYASRFGKVEQSKAIIDTSTGACKGFGFAKFADVRDSEKCIRG 312
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
Y L +A++ + ++ TNLY++NLP E +L ++ A Y VVS++IL
Sbjct: 313 FYHLGYEVGFARVSFNARLKAEGDETSTNLYLSNLPKRLNESELNAIFAGY-HVVSSKIL 371
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR E++++C+ +I+ ++G+++ + V++AD+ +K
Sbjct: 372 RDSMGNSRGVGFARFETREECEDIIKKYHGASIGEEGMLMQVRYADTPAQK 422
>gi|340521752|gb|EGR51986.1| predicted protein [Trichoderma reesei QM6a]
Length = 538
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L S++G + ++KAI+D T C+G+GF F + ++A
Sbjct: 240 NVYIRGLHPTTDDELLYQFTSRFGAVETSKAIIDTNTGACKGFGFAKFYDVRDSELCIRA 299
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L ++ Y + S++IL
Sbjct: 300 FHRLGYEIGFARESFNSRLKAEGDEGSTNLYISNLPKSLNEMELATIFLGY-HIQSSKIL 358
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR +S++ CD++I+ FNG + P+ +++AD+ +K
Sbjct: 359 RDSMGNSRGVGFARFDSREICDEIIRKFNGVGIGEEGLPMNIRYADTPAQK 409
>gi|154317745|ref|XP_001558192.1| hypothetical protein BC1G_03224 [Botryotinia fuckeliana B05.10]
Length = 607
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL +T D+ L +++G + ++KAI+D T C+G+GF + G
Sbjct: 292 NVYIRGLHPNTDDETLAQYAARFGKVETSKAIIDTATGACKGFGFAKYFDVRDSEMCIRG 351
Query: 111 GYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ L + +A++ + ++ TNLY++NLP E +L ++ Y V S+RIL
Sbjct: 352 FWELGYEVGFARESFNARLKAEGDEASTNLYVSNLPKTMTESELGAIFMDY-KVSSSRIL 410
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ N S+GVGFAR E++D C+++I+ F+G + L V++AD+ +K
Sbjct: 411 RDSQNHSRGVGFARFENRDVCEEIIRKFHGQPIGEEGLLLQVRYADTPAQK 461
>gi|358384592|gb|EHK22189.1| hypothetical protein TRIVIDRAFT_149145 [Trichoderma virens Gv29-8]
Length = 539
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + S++G + ++KAI+D T C+G+GF F + ++A
Sbjct: 239 NVYIRGLHPTTDDELLYHFTSRFGAVETSKAIIDTNTGACKGFGFAKFYDVRDSELCIRA 298
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L ++ Y + S++IL
Sbjct: 299 FHRLGYEIGFARESFNSRLKAEGDEGSTNLYISNLPKSLNEMELATIFLGY-HIQSSKIL 357
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR +S++ CD++++ FNG + P+ +++AD+ +K
Sbjct: 358 RDSMGNSRGVGFARFDSREICDEIVRKFNGIGIGEEGLPMNIRYADTPAQK 408
>gi|361129682|gb|EHL01570.1| putative NADPH--cytochrome reductase [Glarea lozoyensis 74030]
Length = 1266
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 107/189 (56%), Gaps = 29/189 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES---------G 110
N+YIRGL +T D+ L S++G + ++KAI+D +T C+G+GF + + G
Sbjct: 978 NVYIRGLHPNTDDETLAAYASRFGAVETSKAIIDTSTGACKGFGFAKYHNVRDSELCIRG 1037
Query: 111 GYALA------------------AVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKEC 152
Y L + K Q+ ++++ + ++ TNLY++NLP N E
Sbjct: 1038 FYKLGYEVGFARVDSPHSLSRGGSTKFFQE-SFNSRLKAEGDESSTNLYVSNLPKNMTES 1096
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
+L ++ Y TV S+RILR++NN S+GVGFAR E+++ CD++I+ F+G + L V
Sbjct: 1097 ELGAIFMDY-TVSSSRILRNSNNESRGVGFARFETREICDEIIRKFHGQPIGEEGLLLQV 1155
Query: 213 KFADSGLKK 221
+FAD+ +K
Sbjct: 1156 RFADTPAQK 1164
>gi|449295843|gb|EMC91864.1| hypothetical protein BAUCODRAFT_98323, partial [Baudoinia
compniacensis UAMH 10762]
Length = 373
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 18/193 (9%)
Query: 46 SPGTPTGP------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
+P +P P Q +TN+YIRGL +TTD+ L + ++G I S+K+I+D T C
Sbjct: 133 APSSPLKPLDRALENQRGETNVYIRGLHPETTDEMLESWGQRFGDIKSSKSIIDMTNGLC 192
Query: 100 RGYGFVDFESGGYALAAVKALQDKGIHAQMARQQ-------EQDP--TNLYIANLPLNFK 150
+G+GFV + + A ++ G AR+ DP TNLY++NLP +
Sbjct: 193 KGFGFVKYHNYEDAENCIRGFHYLGYEVSFARESFYSKLKTFSDPQNTNLYVSNLPKSMN 252
Query: 151 ECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPL 210
E +L L A + V S RILRD N +GVGFAR ++ + C+++I+ FN ++ E L
Sbjct: 253 EHELGQLFAPH-KVCSARILRDKNGNGRGVGFARFDTAEACEEVIRTFNNKSIESGDEDL 311
Query: 211 --LVKFADSGLKK 221
+++AD+ +K
Sbjct: 312 QIQIRYADTQEQK 324
>gi|347837542|emb|CCD52114.1| hypothetical protein [Botryotinia fuckeliana]
Length = 576
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL +T D+ L +++G + ++KAI+D T C+G+GF + + ++
Sbjct: 261 NVYIRGLHPNTDDETLAQYAARFGKVETSKAIIDTATGACKGFGFAKYFDVRDSEMCIRG 320
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ G AR+ ++ TNLY++NLP E +L ++ Y V S+RIL
Sbjct: 321 FWELGYEVGFARESFNARLKAEGDEASTNLYVSNLPKTMTESELGAIFMDY-KVSSSRIL 379
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ N S+GVGFAR E++D C+++I+ F+G + L V++AD+ +K
Sbjct: 380 RDSQNHSRGVGFARFENRDVCEEIIRKFHGQPIGEEGLLLQVRYADTPAQK 430
>gi|429857995|gb|ELA32831.1| RNA binding protein mssp-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 558
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 14/169 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L S++G + ++KAI+D T C+G+GF F + ++
Sbjct: 256 NVYIRGLHPTTDDELLYRFASRFGEVETSKAIIDTATGACKGFGFAKFFDVRDSEMCIRG 315
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E DL + Y ++S++IL
Sbjct: 316 FHRLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKSLTENDLGDIFRGY-HIMSSKIL 374
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADS 217
RD+ S+GVGFAR ES+D CD +I+ FNG +P +E ++ +++AD+
Sbjct: 375 RDSMGNSRGVGFARFESRDVCDAVIKQFNG--IPIGEEGMVMNIRYADT 421
>gi|342884593|gb|EGU84800.1| hypothetical protein FOXB_04695 [Fusarium oxysporum Fo5176]
Length = 753
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 100/190 (52%), Gaps = 29/190 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L S++G + ++KAI+D T C+G+GF F ++ ++
Sbjct: 431 NVYIRGLYPTTDDQTLYQFTSRFGEVETSKAIIDTATGACKGFGFAKFFDVAHSEMCIRG 490
Query: 120 LQDKGIHAQMAR----------------------------QQEQDPTNLYIANLPLNFKE 151
G AR + + D TNLYI+NLP + E
Sbjct: 491 FHRLGYEVGFARACSPNPWMSVEKGKLTFVQESFNSRLKAEGDDDSTNLYISNLPKSLTE 550
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
+L ++ Y T++S++ILRD+ S+GVGFAR E++D CD +I+ F+GS++ +
Sbjct: 551 VELGAIFRDY-TILSSKILRDSMGNSRGVGFARFENRDICDDVIERFHGSSVGDEGLLMN 609
Query: 212 VKFADSGLKK 221
+++AD+ +K
Sbjct: 610 IRYADTPAQK 619
>gi|71017821|ref|XP_759141.1| hypothetical protein UM02994.1 [Ustilago maydis 521]
gi|46098933|gb|EAK84166.1| hypothetical protein UM02994.1 [Ustilago maydis 521]
Length = 703
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 94/173 (54%), Gaps = 10/173 (5%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+Y+ GL ++ D L + S G +IS K++LD+ T C+G+GF+ + S A A+
Sbjct: 228 ETNVYVNGLPEEMNDHMLYLLGSACGVVISHKSMLDRQTGLCKGFGFLMYASSEMAKKAI 287
Query: 118 KALQDKGIHAQMA---------RQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ L G A A R + TN+Y++NLPL F LE L A Y + S +
Sbjct: 288 QWLNSHGFFASFAKESFSARLRRMADTSSTNVYLSNLPLKFTTQQLEQLFAPY-PIASLK 346
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
IL D + S+GVGF R+ + + I +G LPG+ PL V+FADS +K
Sbjct: 347 ILYDVHGESRGVGFVRVYDRATAKECIDRLHGRMLPGTTLPLQVRFADSEAQK 399
>gi|358393904|gb|EHK43305.1| hypothetical protein TRIATDRAFT_164728, partial [Trichoderma
atroviride IMI 206040]
Length = 347
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + S++G + ++KAI+D T C+G+GF F + ++A
Sbjct: 134 NVYIRGLHPTTDDELLYHFTSRFGAVETSKAIIDTNTGACKGFGFAKFYDVRDSELCIRA 193
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ + TNLYI+NLP + E +L ++ Y + S++IL
Sbjct: 194 FHRLGYEIGFARESFNSRLKAEGDDGSTNLYISNLPKSLNEMELATIFLGY-HIQSSKIL 252
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ S+GVGFAR +S+D CD++++ FNG + P+ +++AD+ +K
Sbjct: 253 RDSMGNSRGVGFARFDSRDICDEIVRKFNGIGIGEEGLPMNIRYADTPAQK 303
>gi|406868631|gb|EKD21668.1| RNA binding protein MSSP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 588
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 31/190 (16%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL +T D+ L +++G + ++KAI+D +T C+G+GF + + + ++
Sbjct: 269 NVYIRGLHPNTDDETLAAYAARFGKVETSKAIIDTSTGACKGFGFAKYFAVRDSELCIRG 328
Query: 120 LQDKGIHAQMAR--------------------------QQEQDPTNLYIANLPLNFKECD 153
G AR + ++ TNLY++NLP N E +
Sbjct: 329 FHKLGYEVGFARVPHSESKSPVTAHIGSQESFNSRLKAEGDEQSTNLYVSNLPKNMTESE 388
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL-- 211
L ++ Y TV S+RILRD+ N S+GVGFAR +++D C+++I+ F+G +P +E LL
Sbjct: 389 LGAIFMDY-TVQSSRILRDSQNNSRGVGFARFDNRDVCEEIIRKFHG--MPIGEEGLLLQ 445
Query: 212 VKFADSGLKK 221
V++AD+ +K
Sbjct: 446 VRYADTPAQK 455
>gi|408399911|gb|EKJ79001.1| hypothetical protein FPSE_00858 [Fusarium pseudograminearum CS3096]
Length = 536
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + +++G + ++KAI+D T C+G+GF F + ++
Sbjct: 241 NVYIRGLHPTTDDELLFHYAARFGNVETSKAIIDTATGACKGFGFAKFYDVSESEMCIRG 300
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L + Y T++S++IL
Sbjct: 301 FHRLGYEVGFARESFNSRLKAEGDELSTNLYISNLPKSLTEVELGLIFQGY-TILSSKIL 359
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR E++D CD +++ F+G P +E LL +++AD+ +K
Sbjct: 360 RDSMGNSRGVGFARFENRDVCDDVVEKFHGR--PVGEEGLLMNIRYADTPAQK 410
>gi|310795128|gb|EFQ30589.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 566
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 99/173 (57%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D L +++G + ++KAI+D +T C+G+GF F + ++
Sbjct: 271 NVYIRGLHPTTDDDLLFRFAARFGNVETSKAIIDTSTGACKGFGFAKFYDARDSEMCIRG 330
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E DL + Y ++S++IL
Sbjct: 331 FHRLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKSLTENDLGDIFRGY-HIMSSKIL 389
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR ES+D CD +I+ FN ++P +E ++ +++AD+ +K
Sbjct: 390 RDSMGNSRGVGFARFESRDVCDAVIKQFN--SIPIGEEGMVMNIRYADTPSQK 440
>gi|46136539|ref|XP_389961.1| hypothetical protein FG09785.1 [Gibberella zeae PH-1]
Length = 570
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 14/173 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + +++G + ++KAI+D T C+G+GF F + ++
Sbjct: 275 NVYIRGLHPTTDDELLFHYAARFGNVETSKAIIDTATGACKGFGFAKFYDVSESEMCIRG 334
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP + E +L + Y T++S++IL
Sbjct: 335 FHRLGYEVGFARESFNSRLKAEGDELSTNLYISNLPKSLTEVELGLIFQGY-TILSSKIL 393
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
RD+ S+GVGFAR E++D CD +++ F+G P +E LL +++AD+ +K
Sbjct: 394 RDSMGNSRGVGFARFENRDVCDDVVEKFHGR--PVGEEGLLMNIRYADTPAQK 444
>gi|389635311|ref|XP_003715308.1| sporulation-specific protein 5 [Magnaporthe oryzae 70-15]
gi|351647641|gb|EHA55501.1| sporulation-specific protein 5 [Magnaporthe oryzae 70-15]
Length = 530
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D L+ S++G + +KAI+D +T C+G+GF F+ G + ++
Sbjct: 235 NVYIRGLHPTTDDDLLLRYASRFGEVEQSKAIIDTSTGACKGFGFAKFKDIGDSQKCIRG 294
Query: 120 LQDKGIHAQMARQQ-------EQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ E D TNLYI+NLP + E L + + + S++IL
Sbjct: 295 FYRLGYEVGFARESFNARLKAEGDDMSTNLYISNLPKDITEPLLIHIFDPH-PIASSKIL 353
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+N S+GVGFAR ES++ C+++I+ FNG L + + V++AD+ +K
Sbjct: 354 RDSNGNSRGVGFARFESREVCERIIKNFNGLKLGVDGQEMQVRYADTPSQK 404
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
TNLYI L +D T+ LI++ + PI S+K + D N RG GF FES
Sbjct: 322 TNLYISNLPKDITEPLLIHIFDPH-PIASSKILRDSNGNS-RGVGFARFES 370
>gi|440476064|gb|ELQ44702.1| sporulation-specific protein 5 [Magnaporthe oryzae Y34]
gi|440480849|gb|ELQ61489.1| sporulation-specific protein 5 [Magnaporthe oryzae P131]
Length = 589
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D L+ S++G + +KAI+D +T C+G+GF F+ G + ++
Sbjct: 294 NVYIRGLHPTTDDDLLLRYASRFGEVEQSKAIIDTSTGACKGFGFAKFKDIGDSQKCIRG 353
Query: 120 LQDKGIHAQMARQQ-------EQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ E D TNLYI+NLP + E L + + + S++IL
Sbjct: 354 FYRLGYEVGFARESFNARLKAEGDDMSTNLYISNLPKDITEPLLIHIFDPH-PIASSKIL 412
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+N S+GVGFAR ES++ C+++I+ FNG L + + V++AD+ +K
Sbjct: 413 RDSNGNSRGVGFARFESREVCERIIKNFNGLKLGVDGQEMQVRYADTPSQK 463
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
TNLYI L +D T+ LI++ + PI S+K + D N RG GF FES
Sbjct: 381 TNLYISNLPKDITEPLLIHIFDPH-PIASSKILRDSNGN-SRGVGFARFES 429
>gi|399152199|emb|CCI89170.1| elav protein, partial [Sepia officinalis]
Length = 171
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL I + Q TD++ +M GPI S K + DK T G+GFVD+E A A++
Sbjct: 1 TNLIINYIPQTLTDEEFRSMFLSIGPIKSAKIVRDKATGYSYGFGFVDYEKVEDAQRAMQ 60
Query: 119 AL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
L Q+K I +AR +E NLY+ NLP ++++ DLE L ++ T++ +R+L
Sbjct: 61 TLNGLQMQNKTIKVALARPGGEEIKGANLYVRNLPRHYQQMDLERLFQRFGTIIQSRVLT 120
Query: 172 DNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
D SKGVGF + K + ++ I +G+ G EPLL+KFAD KK
Sbjct: 121 DQTTGQSKGVGFVLFDQKKQAEEAISQISGTVPAGGTEPLLIKFADDNAKK 171
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G E++ NLY+R L + DL + ++G II ++ + D+TT + +G GFV F+
Sbjct: 80 GGEEIKGANLYVRNLPRHYQQMDLERLFQRFGTIIQSRVLTDQTTGQSKGVGFVLFDQKK 139
Query: 112 YALAAVKAL 120
A A+ +
Sbjct: 140 QAEEAISQI 148
>gi|302895463|ref|XP_003046612.1| hypothetical protein NECHADRAFT_91062 [Nectria haematococca mpVI
77-13-4]
gi|256727539|gb|EEU40899.1| hypothetical protein NECHADRAFT_91062 [Nectria haematococca mpVI
77-13-4]
Length = 594
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 10/169 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG--YGFVDFE---SGGYAL 114
N+YIRGL T D+ L + S++GP+ ++KAI+D T C+G Y D E G + L
Sbjct: 290 NVYIRGLHPTTDDELLYHYASRFGPVETSKAIIDTGTGACKGQFYSSADSEMCIRGFHRL 349
Query: 115 AAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNN 174
+ ++++ + + TNLYI+NLP + E +L ++ + T++S++ILRD+
Sbjct: 350 GYEVGFARESFNSRLKAEGDDTSTNLYISNLPKSLTEVELGTIFLGF-TILSSKILRDSM 408
Query: 175 NTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL--VKFADSGLKK 221
S+GVGFAR ES+D CD++I+ F G L +E LL +++AD+ +K
Sbjct: 409 GNSRGVGFARFESRDVCDEIIERFTGLAL--GEEGLLMNIRYADTPAQK 455
>gi|440639877|gb|ELR09796.1| hypothetical protein GMDG_04279 [Geomyces destructans 20631-21]
Length = 578
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL DT D+ L + +G + ++KAI+D T C+G+GF + + ++
Sbjct: 277 NVYIRGLHPDTNDETLAAYANIFGRVETSKAIIDTGTGTCKGFGFAKYFDVRDSENCIRG 336
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
KG AR+ + TNLY++NLP E +L + Y VVS+RIL
Sbjct: 337 FFVKGYEVGFARESFNSRLKAKGDHSSTNLYVSNLPKTMNEMELAATFMDY-NVVSSRIL 395
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
D+ S+GVGFAR ES++ C+++I++++G+ + + V++AD+ +K
Sbjct: 396 HDSQGNSRGVGFARFESREICEEIIRVYHGTAVGQEGLLMQVRYADTPAQK 446
>gi|388582343|gb|EIM22648.1| hypothetical protein WALSEDRAFT_53928 [Wallemia sebi CBS 633.66]
Length = 409
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 11/182 (6%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+ L+ TN++I+GL+ TT +DL QYG S + I+ C+GYGFV F +
Sbjct: 105 PSLDNPLNTTNVFIQGLSPLTTPEDLQRAVEQYGMTSSARVIMQPNKKTCKGYGFVQFIN 164
Query: 110 GGYALAAVKALQDKGIHAQMARQ----------QEQDPTNLYIANLPLNFKECDLESLLA 159
A A+ AL KGI+A A+Q +++ TNLY++NLPL+ + L S+L
Sbjct: 165 TYEAQRAIIALNCKGINAAFAKQESFTARLRRLEDEGSTNLYLSNLPLDMDDGKL-SVLF 223
Query: 160 KYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGL 219
+ S R+L++ N S+GVGF R++ + I +G TL GS PL V+FADS
Sbjct: 224 YPANIQSLRVLKNENGESRGVGFVRVKDRQTASYFIDKLHGITLSGSSLPLQVRFADSQS 283
Query: 220 KK 221
+K
Sbjct: 284 QK 285
>gi|343429823|emb|CBQ73395.1| related to ELAV-like protein 2 [Sporisorium reilianum SRZ2]
Length = 693
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+Y+ GL ++ D L + S G +IS KA++D+ + +C+G+GF+ + S A A+
Sbjct: 229 ETNVYVNGLPKEMNDHMLYLLGSVCGVVISHKAMMDRQSGQCKGFGFLMYASSEMAKTAI 288
Query: 118 KALQDKG---------IHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ L G + A++ R + TN+Y++NLP+ LE L + Y + S +
Sbjct: 289 EWLNSHGFAASFAQESLSARLRRMADTSSTNVYLSNLPIKMTTQQLEQLFSPY-PIASLK 347
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
IL D + S+GVGF RL + I+ +G LPG+ PL V+FADS +K+
Sbjct: 348 ILYDVHGESRGVGFVRLFDRAAAKLCIERLHGRVLPGTTLPLQVRFADSEAQKQ 401
>gi|443898681|dbj|GAC76015.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 588
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 10/169 (5%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+Y+ GL ++ D L + S G +IS KA+LD+ T C+G+GF+ + + A A+
Sbjct: 147 ETNVYVNGLPKEINDNMLYLLGSFCGVVISHKAMLDRHTGLCKGFGFLMYATPDMATTAI 206
Query: 118 KALQDKGIHAQMA---------RQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ L G A A R + TN+Y++NLP+ E LE L + V S +
Sbjct: 207 EWLNSHGFSASFAKESFSARLRRMADTSSTNVYLSNLPVKLNEAQLEQLFNPH-PVASLK 265
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
IL D + SKGVGF RL + I+ +G LPG+ PL V+FADS
Sbjct: 266 ILYDVHGESKGVGFVRLLDRQTARTCIERLHGRVLPGTTLPLQVRFADS 314
>gi|431839385|gb|ELK01311.1| Pendrin [Pteropus alecto]
Length = 869
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+QLSKTN YI+GL T +D + +C YG +S AILDKTTNKC+GYG V+++S
Sbjct: 757 DQLSKTNFYIQGLQPGTIQQDDVKLCQSYGKTVSIMAILDKTTNKCKGYGSVNYDSTSAI 816
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
A+ L+ + QMA+QQE+ PTNLYI+NLPL+ E +LE +L + V+ST
Sbjct: 817 KKAITELKASDVLIQMAQQQEE-PTNLYISNLPLSMDEQELEGILKPFGQVIST 869
>gi|407920252|gb|EKG13468.1| hypothetical protein MPH_09377 [Macrophomina phaseolina MS6]
Length = 583
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 13/176 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+YIRGL +TTD+ L ++G I S+K+I+D TN+C+GYGF+ + + A +
Sbjct: 280 ETNVYIRGLLPETTDEMLHQWGMRFGDIQSSKSIIDVKTNQCKGYGFIKYYNFKDAENCI 339
Query: 118 KALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ G AR+ ++ TNLY++N+P + E +L S+ Y V S++
Sbjct: 340 RGFHYLGYEVSFARESFYAKLKKFSDEANTNLYVSNIPRHINEAELTSIFHPY-KVCSSK 398
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLP---GSKEPLLVKFADSGLKK 221
ILRD +GVGFAR ES+D C+++I+ FN + + G + +++AD+ +K
Sbjct: 399 ILRDGGGHGRGVGFARFESRDICEEVIKKFNNTPVAVPDGEDHVIQIRYADTQEQK 454
>gi|402082734|gb|EJT77752.1| sporulation-specific protein 5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 538
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 100/174 (57%), Gaps = 14/174 (8%)
Query: 60 NLYIRGLTQDTTDKDLI-NMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
N+YIRGL TTD DL+ ++G + +KAI+D +T C+G+GF F+S
Sbjct: 243 NVYIRGL-HPTTDDDLLQKYAERFGEVDQSKAIIDTSTGACKGFGFAKFKSVRDSERCIR 301
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G Y L + +A++ + + TNLYI+NLP + E L + Y + S++I
Sbjct: 302 GFYRLGYEVGFARESFNARLKAEGDDLSTNLYISNLPKDITEPMLIQIFHPY-QIASSKI 360
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL--PGSKEPLLVKFADSGLKK 221
LRD+N S+GVGFAR ES++ C+++I+ +NG L + + V++AD+ +K
Sbjct: 361 LRDSNGNSRGVGFARFESREVCERIIRDYNGLKLGVDAHVQEMQVRYADTPAQK 414
>gi|396465050|ref|XP_003837133.1| hypothetical protein LEMA_P033670.1 [Leptosphaeria maculans JN3]
gi|312213691|emb|CBX93693.1| hypothetical protein LEMA_P033670.1 [Leptosphaeria maculans JN3]
Length = 577
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+YIRGL +TTD+ L + ++G I S+K+I+D + C+G+GF+ + + A +
Sbjct: 282 ETNVYIRGLLPETTDEMLHSWGKRFGDIQSSKSIIDNKSYLCKGFGFIKYHNFEDAEDCI 341
Query: 118 KALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ G AR+ ++ TNLY++N+P N E +L + + V S++
Sbjct: 342 RGFHYLGYEVSFARESFYSKLKKFSDECNTNLYVSNIPKNMNEHELALIFTPH-KVCSSK 400
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL--PGSKEPLL-VKFADSGLKK 221
+LRD T +GVGFAR E+++ CD++I+ FN + G +E L+ ++F+D+ +K
Sbjct: 401 VLRDPAGTGRGVGFARFETREICDEVIKTFNNMPIAKAGGEEHLIQIRFSDTHEQK 456
>gi|444705714|gb|ELW47107.1| Integrin beta-6 [Tupaia chinensis]
Length = 1357
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKY 161
YGFVDF+S A AV AL+ G+ AQMA+QQEQDPTNLYI+NLPL+ E +LE++L +
Sbjct: 16 YGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPF 75
Query: 162 VTVVSTRILRDNNNTSKGVGFARL 185
V+STRILRD++ TS+GVGFAR
Sbjct: 76 GQVISTRILRDSSGTSRGVGFARF 99
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI L +++L NM +G +IST+ IL ++ RG GF F Y++A +
Sbjct: 52 TNLYISNLPLSMDEQELENMLKPFGQVISTR-ILRDSSGTSRGVGFARFYPSPYSIATNR 110
Query: 119 ALQDKGIHAQMA 130
+ I +A
Sbjct: 111 MITQTSITPYIA 122
>gi|388853865|emb|CCF52586.1| related to ELAV-like protein 2 [Ustilago hordei]
Length = 719
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y+ GL ++ DK L + S G +IS KA++D+ T C+G+GF+ + S A A+
Sbjct: 231 TNIYVNGLPKEMNDKLLYLLGSACGVVISHKAMMDRQTGFCKGFGFLMYASNDMAKKAID 290
Query: 119 ALQDKGIH---------AQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L G A++ R + +N+Y++NLPL F LE L + V S +I
Sbjct: 291 WLNSHGFSSSFAKESFTARLRRMADTTSSNVYLSNLPLKFTVDQLEQLFNPH-PVASLKI 349
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
L D + SKGVGF RL + I +G LPG+ PL +FADS +K+
Sbjct: 350 LYDVHGESKGVGFVRLHDRATAKLCIDRLHGRVLPGTTLPLQARFADSDAQKQ 402
>gi|167523433|ref|XP_001746053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775324|gb|EDQ88948.1| predicted protein [Monosiga brevicollis MX1]
Length = 635
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+SKTNL I + + DL + YG + S K + D+ T K GYGFV++E A
Sbjct: 185 VSKTNLIINYIPNSFSQDDLRALFGAYGALKSCKLMYDRATGKSLGYGFVEYEDENGATK 244
Query: 116 AVKAL-----QDKGIHAQMARQQEQDPTN--LYIANLPLNFKECDLESLLAKYVTVVSTR 168
A AL ++K + AR TN LYI LP E L + + ++S R
Sbjct: 245 AADALNEFQIENKRLKVSFARPSSSTITNANLYIKGLPTTINEQSLTDMFSSCGDIISVR 304
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+L D N T KGVGF R + + + IQ FN T G PL+VKFAD+ K R A
Sbjct: 305 VLYDRNGTPKGVGFVRFDQHKEAENAIQRFNNVTPEGCTTPLVVKFADNA-KSRAAAPPP 363
Query: 229 PNI 231
P++
Sbjct: 364 PHV 366
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 94/167 (56%), Gaps = 8/167 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 169 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 228
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA+
Sbjct: 229 CDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFAN 275
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL ++ T DL ++ S YG II+++ + D T +G GF+ F+ A
Sbjct: 191 ESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGLSKGVGFIRFDQRFEA 250
Query: 114 LAAVKAL 120
A+K L
Sbjct: 251 DRAIKEL 257
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 358 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
>gi|74194022|dbj|BAE36928.1| unnamed protein product [Mus musculus]
Length = 170
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 17 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 76
Query: 114 LAAVKALQDKGIHAQMARQQEQDP 137
AV +L+ G+ AQMA+ ++ P
Sbjct: 77 QKAVASLKANGVQAQMAKGTQRFP 100
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 169 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 228
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 229 CDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 276
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK + +
Sbjct: 9 VQQNGGSTLGQTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSL 68
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 69 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQD 128
Query: 154 LESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ NG+ GS EP+ V
Sbjct: 129 LENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITV 188
Query: 213 KFADS 217
KFA++
Sbjct: 189 KFANN 193
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 254 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 313
Query: 121 QDKGIHAQMARQQEQ 135
+ ++ + ++Q
Sbjct: 314 NGYTLGNRVLQDEQQ 328
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 102/185 (55%), Gaps = 8/185 (4%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK + +
Sbjct: 9 VQQNGGSTLGQTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSL 68
Query: 101 GYGFVDF---ESGGYALAAVKA--LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ E A++ + LQ+K I AR + NLY++ LP N + D
Sbjct: 69 GYGFVNYHRPEDAEKAISTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQD 128
Query: 154 LESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ NG+ GS EP+ V
Sbjct: 129 LENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITV 188
Query: 213 KFADS 217
KFA++
Sbjct: 189 KFANN 193
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
>gi|402861775|ref|XP_003895256.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like [Papio anubis]
Length = 206
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 61/78 (78%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMAR 131
AV +L+ G+ AQMA+
Sbjct: 116 QKAVASLKANGVQAQMAK 133
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTR-ILRDNNNTSKGVGFARLES 187
TNLYI LP + DL L Y +VST+ IL N N KG GF +S
Sbjct: 61 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDS 111
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 8/185 (4%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK + +
Sbjct: 10 VQQNGGSTLGQTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQD 129
Query: 154 LESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ NG+ GS EP+ V
Sbjct: 130 LENLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAERAIQELNGTIPKGSSEPITV 189
Query: 213 KFADS 217
KFA++
Sbjct: 190 KFANN 194
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 337
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG G+ ++ SKTNL + L Q T +++ ++ S G + S K I DK T +
Sbjct: 9 VQQNGRSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQSL 68
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR NLY++ L + + D
Sbjct: 69 GYGFVNYHRPEDAEKAINTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQD 128
Query: 154 LESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE+L Y ++++RIL DN SKGVGF R + + + ++ IQ NG+T G+ EP+ V
Sbjct: 129 LENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITV 188
Query: 213 KFADS 217
KFA++
Sbjct: 189 KFANN 193
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ AV++L
Sbjct: 257 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSL 316
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 117 VKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NN 175
++ +Q G + QE TNL + LP + +++SL + V S +++RD
Sbjct: 6 LETVQQNGRSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTG 65
Query: 176 TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
S G GF + ++ I FNG L + + V FA
Sbjct: 66 QSLGYGFVNYHRPEDAEKAINTFNGLRL--QNKTIKVSFA 103
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 31/217 (14%)
Query: 26 TGSQNGGTHPITTNNV----QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQ 81
TG G + TN + Q NG G ++ SKTNL + L Q T +++ ++ S
Sbjct: 13 TGGSAGKACGMMTNGIAETQQQNG------GSQEDSKTNLIVNYLPQQMTQEEIRSLFSS 66
Query: 82 YGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ- 135
G + S K I DK T + GYGFV+++ A A+ LQ+K I AR +
Sbjct: 67 IGEVESCKLIRDKVTGQSLGYGFVNYQRAEDASKAINTLNGLRLQNKQIKVSFARPSSEA 126
Query: 136 -DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT--------------SKGV 180
NLY++ LP N + DLESL + Y ++++RIL DN SKGV
Sbjct: 127 IKGANLYVSGLPKNMLQSDLESLFSPYGRIITSRILCDNITARQYASASGEVSPGLSKGV 186
Query: 181 GFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
GF R + + + ++ I+ NG+ GS EP+ VKFA++
Sbjct: 187 GFIRFDQRTEAEKAIKELNGTIPKGSTEPITVKFANN 223
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 284 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 343
>gi|350591015|ref|XP_003483183.1| PREDICTED: RNA-binding motif, single-stranded-interacting protein
3-like, partial [Sus scrofa]
Length = 133
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 61/78 (78%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 56 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 115
Query: 114 LAAVKALQDKGIHAQMAR 131
AV +L+ G+ AQMA+
Sbjct: 116 QKAVASLKANGVQAQMAK 133
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTR-ILRDNNNTSKGVGFARLES 187
TNLYI LP + DL L Y +VST+ IL N N KG GF +S
Sbjct: 61 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDS 111
>gi|26349469|dbj|BAC38374.1| unnamed protein product [Mus musculus]
Length = 159
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 61/78 (78%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQLSKTNLYIRGL TTD+DLI +C YG I+STKAILDK TN+C+GYGFVDF+S A
Sbjct: 50 EQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAA 109
Query: 114 LAAVKALQDKGIHAQMAR 131
AV +L+ G+ AQMA+
Sbjct: 110 QKAVASLKANGVQAQMAK 127
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTR-ILRDNNNTSKGVGFARLESKDKCDQMIQ 196
TNLYI LP + DL L Y +VST+ IL N N KG GF +S
Sbjct: 55 TNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDS--------- 105
Query: 197 LFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRG 234
P + + + +G++ + A + +++RG
Sbjct: 106 -------PAAAQKAVASLKANGVQAQMAKSSCDSVHRG 136
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 97 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 156
Query: 118 KA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 157 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 216
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 217 CDNITDEHAQGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 269
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 351 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 410
>gi|312376709|gb|EFR23717.1| hypothetical protein AND_12364 [Anopheles darlingi]
Length = 293
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 73/122 (59%), Gaps = 32/122 (26%)
Query: 151 ECDLESLLAKYVTVVSTRILRDNNNTSKG------------------------VGFARLE 186
E D+E+LL+KY V+STRILRD N SKG VGFAR+E
Sbjct: 6 ETDVENLLSKYGQVISTRILRDQNAQSKGESHFSHRSLRSTNVPGVFAFHYSGVGFARME 65
Query: 187 SKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDS 246
S+DKC+Q+IQ+FNG+ LPG+KEPLLVKFAD G KK+ N ++ P R W R+
Sbjct: 66 SRDKCEQIIQMFNGNQLPGAKEPLLVKFADGGSKKK-------NPFKSPDPNTRTW-REG 117
Query: 247 AD 248
A+
Sbjct: 118 AE 119
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 169 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 228
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 229 CDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 276
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 358 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 417
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 123 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 182
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 183 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 242
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA+
Sbjct: 243 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFAN 294
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 377 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 436
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 112 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 171
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + + ++++RIL
Sbjct: 172 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPFGKIITSRIL 231
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 232 CDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 279
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 361 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 420
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 118 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 177
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 178 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 237
Query: 171 RDNNN------TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 238 CDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 290
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 372 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 431
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 315 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 374
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 375 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 434
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 435 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 487
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 569 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 628
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 312 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 371
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 372 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 431
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 432 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 484
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 566 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 625
>gi|327304751|ref|XP_003237067.1| RNA binding protein MSSP-2 [Trichophyton rubrum CBS 118892]
gi|326460065|gb|EGD85518.1| RNA binding protein MSSP-2 [Trichophyton rubrum CBS 118892]
Length = 656
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L N S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ ++++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKNSTNVYCTNVPIDWAEADLRRHFEPY-QVVSEKI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR E+++ ++++Q F N G K LL++FAD+ +K+
Sbjct: 434 SRDEKTGVSKEVGFARFETREIAEKVVQQFHNVVGKDGVK--LLLRFADTKAQKQ 486
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 101 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 160
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 161 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 220
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA+
Sbjct: 221 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFAN 272
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 355 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 414
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK T +
Sbjct: 10 VQQNGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRSEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTIPKGSSEPITVKFANN 207
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 291 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 350
>gi|315045852|ref|XP_003172301.1| hypothetical protein MGYG_04890 [Arthroderma gypseum CBS 118893]
gi|311342687|gb|EFR01890.1| hypothetical protein MGYG_04890 [Arthroderma gypseum CBS 118893]
Length = 655
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 12/174 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L N S++G I KAI+D T C+G+GFV F S
Sbjct: 314 TNVYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGLCKGFGFVQFFSFDACENCIR 373
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ ++++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 374 GFFHLGYQASFAQKSRNSRLKDLEDKNSTNVYCTNVPIDWAEADLRRHFEPY-QVVSEKI 432
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR E+++ ++++Q F+ + + + LL++FAD+ +K+
Sbjct: 433 SRDEKTGVSKEVGFARFETREIAEKVVQQFH-NIVGKNGVKLLLRFADTKAQKQ 485
>gi|326473022|gb|EGD97031.1| hypothetical protein TESG_04453 [Trichophyton tonsurans CBS 112818]
Length = 656
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 99/175 (56%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L N S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ ++++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKNSTNVYCTNVPIDWAEADLRRHFEPY-QVVSEQI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR E+++ ++++Q F N G K LL++FAD+ +K+
Sbjct: 434 SRDEKTGVSKEVGFARFETREIAEKVVQQFHNVVGKDGVK--LLLRFADTKAQKQ 486
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 111 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 170
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 171 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 230
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 231 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 283
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
+PG P PE +KTNL + L Q T++ L + SQ+G ++S K I DK++ GYGFV
Sbjct: 12 NPG-PQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSGISLGYGFV 70
Query: 106 DFESGGYALAAVKALQDKGIHAQMARQQEQDPT-------NLYIANLPLNFKECDLESLL 158
++ S A A++ + + ++ + P+ N+Y+ANLP +L++L
Sbjct: 71 NYGSAEEAEHAIQKMNGTTLESKTLKVSYARPSSVAIKNANVYVANLPPQLSLTELDALF 130
Query: 159 AKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
Y T++++++L D + +GVGF R + + + I NG L G +PLLVKFA+
Sbjct: 131 QPYGTIITSKVLTDEDTGAGRGVGFVRFDKYTQAEVAIAALNGKQLVGGTQPLLVKFAN 189
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia vitripennis]
Length = 349
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T +++ ++ S G + S K I DK T +
Sbjct: 10 VQQNGGSNLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTIPKGSTEPITVKFANN 207
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 268 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 327
>gi|427782345|gb|JAA56624.1| Putative rna-binding protein elav/hu rrm superfamily [Rhipicephalus
pulchellus]
Length = 319
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S+TNL I L Q TD++ ++ + GPI S+K + K T G+GFVD++ G A A
Sbjct: 8 SQTNLIINYLPQGLTDEEFRSLFTSIGPIKSSKIVRHKATGYSYGFGFVDYQGAGDAARA 67
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
V++ LQ+K I AR + NLYI +P +F E L A + ++ R+
Sbjct: 68 VESLNGLQLQNKKIKVAYARPGGETIKHANLYIRGIPKHFPPEQAEKLFADFGRLIQFRV 127
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK-RGAGAG 227
L+D+ ++KGV FA + ++ + + G TLPG+ EPLL+KFA+ KK R G
Sbjct: 128 LKDDAGQSNKGVAFALYDLRENAEAAMAALTGQTLPGATEPLLIKFAEDNSKKLRPPGGR 187
Query: 228 GP 229
GP
Sbjct: 188 GP 189
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
L++ N+ + E L L A+Y TV I+RD SKG GF + + C I+
Sbjct: 242 LFVYNIGTDTDEKSLWQLFAQYGTVTKVNIIRDTATGLSKGFGFVTMANYQDCVWAIEAL 301
Query: 199 NGSTLPGSKEPLLVKF 214
NG G PL V F
Sbjct: 302 NGFRYAG--RPLQVSF 315
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
L++ + DT +K L + +QYG + I D T +G+GFV +++ +A+ A+
Sbjct: 242 LFVYNIGTDTDEKSLWQLFAQYGTVTKVNIIRDTATGLSKGFGFVTMANYQDCVWAIEAL 301
Query: 118 KALQDKGIHAQMARQQ 133
+ G Q++ +Q
Sbjct: 302 NGFRYAGRPLQVSFKQ 317
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 111 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 170
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 171 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 230
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 231 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 283
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 365 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 424
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 169 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 228
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 229 CDNITGEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 281
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK T +
Sbjct: 10 VQQNGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTIPKGSSEPITVKFANN 207
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 281 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 340
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 109 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 168
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 169 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 228
Query: 171 RDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 229 CDNITDEHAAGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 281
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 363 IFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 422
>gi|328772196|gb|EGF82235.1| hypothetical protein BATDEDRAFT_34672 [Batrachochytrium
dendrobatidis JAM81]
Length = 1030
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 45/294 (15%)
Query: 10 SNATSPANTHSSS---SSNTGSQNGGTHPITTNNVQ----HNGSPGTPTGPEQLSKTNLY 62
SNA++ + HS +S++ QN + +NN++ N G+ G TN+Y
Sbjct: 588 SNASTATSGHSKRQYGNSSSRGQNQQQYHHASNNMRAQERKNSFGGSDNGHNFYMTTNIY 647
Query: 63 IRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES------------- 109
+R L+ TD D + +C ++G I+S+KAI+D TN C+G+GFV +E+
Sbjct: 648 VRKLSPHVTDADFVELCKEFGKIVSSKAIIDPMTNMCKGFGFVMYETIEETQQATLGLVV 707
Query: 110 GGYALAAVK------------ALQDKGIHA-QMARQQEQDPTNLYIANLPLNFKECDLES 156
GY +A K AL I+ +++ QE T+LY+A LP + E L
Sbjct: 708 KGYEVAPAKIGPRNMAVSPNQALPALDINTKELSADQE---TSLYVACLPQDMNEEGLLE 764
Query: 157 LLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L + + +S+R++ + NN S+G+GF + + I FNG+ +PG+ L V A+
Sbjct: 765 LFSDF-KPISSRVMFE-NNVSRGMGFIKFSDRQAAKSAITKFNGAVIPGASRALRVSVAE 822
Query: 217 SGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEH-----PMTPIPATIQ 265
++R + + Y L +SA + Y H P TP P + Q
Sbjct: 823 PPGQRRHKNSHYKHHYMSRNQHYNLQSANSA--KPLYFHAPQQVPWTPNPYSPQ 874
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 36 ITTNNVQHNGSPGTPTGPEQL------SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
+ T +Q NG G+ + + L SKTNL + L Q T D+ ++ S G + S K
Sbjct: 1 METPTIQQNG--GSESAVQVLQRDMKDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCK 58
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQDP--TNLYI 142
I DK T + GYGFV+++ A A+ + LQ+K I +AR + NLYI
Sbjct: 59 LIRDKATGQSLGYGFVNYKRQEDASKAITSLNGLRLQNKTIKVSVARPSSESIKGANLYI 118
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP N + DLE++ ++++RIL D N SKGVGF R + + + ++ I++ NG+
Sbjct: 119 SGLPKNMTQVDLENMFNHCGNIITSRILCDQNTGISKGVGFIRFDQRHEAERAIKMLNGT 178
Query: 202 TLPGSKEPLLVKFA 215
G+ +P+ VKFA
Sbjct: 179 IPEGATDPITVKFA 192
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ L +T + L + +G + + K + D T KC+G+GFV + AL A+ AL
Sbjct: 280 LFVYNLAPETEENVLWQLFGPFGAVQNVKVVRDYATLKCKGFGFVTMTNYEEALMAIHAL 339
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 120 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 179
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
A LQ+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 180 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 239
Query: 171 RDNNN------TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + + + D+ I+ NG+T S EP+ VKFA++
Sbjct: 240 CDNITDEHAPGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANN 292
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D +NKC+G+GFV + A+ A+++L
Sbjct: 374 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEAVLAIQSL 433
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL I L Q T +++ ++ + G I S K + DK T + GYGFV++ AL A
Sbjct: 42 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRA 101
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
V + LQ+K I AR + +NLY++ +P + +LES+ + ++++RI
Sbjct: 102 VSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 161
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L DN SKGVGF R + KD+ D I+ NGS G E + VKFA+
Sbjct: 162 LSDNVTGLSKGVGFVRFDKKDEADNAIKTLNGSIPTGCSEQITVKFAN 209
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ L DT D L + SQ+G I++ K IL T KC+GY FV + A A+ +L
Sbjct: 377 LFVYNLAADTDDTLLWQLFSQFGAILNVK-ILRDLTQKCKGYAFVSMSTYTEAYNAMVSL 435
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+Q+ +NLY+ G+ + T +L ++ +G II+++ + D T +G GFV F+ A
Sbjct: 125 DQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEA 184
Query: 114 LAAVKAL 120
A+K L
Sbjct: 185 DNAIKTL 191
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK + +
Sbjct: 10 VQQNGGSTLGQTSQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLSGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMAQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L + Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTIPKGSSEPITVKFANN 207
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 291 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 350
>gi|325094400|gb|EGC47710.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 626
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 289 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 348
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 349 GFFHLGYQASFAQKSRNSRLKDLEDKSSTNIYCTNVPIDWVEADLRRHFQPY-QVVSEKI 407
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR ES+D ++++ F+ T + LL++FAD+ +K+
Sbjct: 408 SRDEKTGVSKEVGFARFESRDIAEKVLSEFHNVTAKDGVK-LLLRFADTKAQKQ 460
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL I L Q T +++ ++ + G I S K + DK T + GYGFV++ AL A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVQEADALRA 99
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
V + LQ+K I AR + +NLY++ +P + +LES+ + ++++RI
Sbjct: 100 VSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L DN SKGVGF R + KD+ D I+ NGS G E + VKFA+
Sbjct: 160 LSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPTGCSEQITVKFAN 207
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ L DT D L + SQ+G I++ K IL T KC+GY FV + A A+ +L
Sbjct: 379 LFVYNLAADTDDTLLWQLFSQFGAILNVK-ILRDLTQKCKGYAFVSMSTYTEAYNAMVSL 437
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ + G + S K I DK T +
Sbjct: 10 VQQNGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTVPKGSSEPITVKFANN 207
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 290 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 349
>gi|240275047|gb|EER38562.1| RNA binding protein MSSP-2 [Ajellomyces capsulatus H143]
Length = 534
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 289 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 348
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 349 GFFHLGYQASFAQKSRNSRLKDLEDKSSTNIYCTNVPIDWVEADLRRHFQPY-QVVSEKI 407
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR ES+D ++++ F+ T + LL++FAD+ +K+
Sbjct: 408 SRDEKTGVSKEVGFARFESRDIAEKVLSEFHNVTAKDGVK-LLLRFADTKAQKQ 460
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 21/198 (10%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ + G + S K I DK T +
Sbjct: 10 VQQNGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFASIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT--------------SKGVGFARLESKDKCDQMIQLFN 199
LE+L Y ++++RIL DN SKGVGF R + + + ++ IQ N
Sbjct: 130 LENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPGLSKGVGFIRFDQRVEAERAIQELN 189
Query: 200 GSTLPGSKEPLLVKFADS 217
G+ GS EP+ VKFA++
Sbjct: 190 GTVPKGSSEPITVKFANN 207
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 290 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 349
>gi|325296731|ref|NP_001191601.1| ELAV 2-like protein [Aplysia californica]
gi|65307079|gb|AAY42042.1| ELAV 2-like protein [Aplysia californica]
Length = 325
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL I L Q TD++ +M GP+ S+K + DK+T G+GFVDF+ A A
Sbjct: 16 SSTNLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHPTDAQRA 75
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
++ LQ+K I +AR + NLYI NLP+ +KE +L + Y ++ +R+
Sbjct: 76 IETLSGLQLQNKRIKVALARPGGDQIKGANLYIRNLPVAWKETELNKIFEPYGKIIQSRV 135
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D + SK VGF +++D+ + I+ +G G+ E +++KFAD KK
Sbjct: 136 LVDLSTGISKRVGFVLYDTRDEAENAIKCLSGKVPEGATEAIMIKFADDNSKK 188
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 47 PGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVD 106
PG P Q L++ + + TD+ L + S +G + +LD N+C+GYGFV
Sbjct: 231 PGMPQA--QQGGYTLFVYNIGFNATDRTLWQLFSPFGTVQKVNIMLDHEKNQCKGYGFVT 288
Query: 107 FESGGYALAAVKAL 120
+ A A+ L
Sbjct: 289 MTNYQEAQNAINCL 302
>gi|425777588|gb|EKV15752.1| RNA binding protein MSSP-2, putative [Penicillium digitatum Pd1]
gi|425779782|gb|EKV17814.1| RNA binding protein MSSP-2, putative [Penicillium digitatum PHI26]
Length = 602
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 25/253 (9%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L +++G I KAI+D T+ C+G+GFV FES
Sbjct: 275 TNVYIRGFLPETTDEMLHAYAARFGKIERCKAIVDLDTSLCKGFGFVQYYSFESCENCIR 334
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL + VVS +I
Sbjct: 335 GFFYLGYQASFAQKSRNSRLKDLEDKSSTNIYCTNIPIDWTEADLRRHFEPW-RVVSEKI 393
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTL-PGSKEPLLVKFADSGLKKRGAGAG 227
RD SK VGFAR E++D ++++ F+ +T G K LL++FAD+ +K
Sbjct: 394 SRDEKTGVSKEVGFARFENRDVAEKVLMEFHNATKNDGVK--LLLRFADTKAQK------ 445
Query: 228 GPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGY-TPW 286
I + E R + + + TP P + T + PAG + W
Sbjct: 446 ---ILKQQSNERRAYRAGEYNYSVEVVQGSTPSPGVKRGSHLTPNSQVSYTSPAGVGSNW 502
Query: 287 VPTQYVMPA-PHM 298
P + P PHM
Sbjct: 503 TPATSISPCHPHM 515
>gi|242803594|ref|XP_002484206.1| RNA binding protein MSSP-2, putative [Talaromyces stipitatus ATCC
10500]
gi|218717551|gb|EED16972.1| RNA binding protein MSSP-2, putative [Talaromyces stipitatus ATCC
10500]
Length = 577
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+ FV +FES
Sbjct: 240 TNVYIRGFPPETTDEMLHAYASRFGEIDRCKAIVDLDTGLCKGFAFVQFFNFESCENCIR 299
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G Y L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 300 GFYYLGYQASFAQKSRNSRLKDLEDRSSTNIYCTNVPIEWSEADLRRHFEPY-RVVSEKI 358
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR E++D +++I+ F N + G K LL++FAD+ +K
Sbjct: 359 SRDEKTGVSKEVGFARFETRDIAERVIEEFHNVAGKDGHK--LLLRFADTKAQK 410
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHAGTGWCIFV 281
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|159163529|pdb|1X4E|A Chain A, Solution Structure Of Rrm Domain In Rna Binding Motif,
Single-Stranded Interacting Protein 2
Length = 85
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+ LYIRGL TTD+DL+ +C YG I+STKAILDKTTNKC+GYGFVDF+S A AV
Sbjct: 6 SGLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65
Query: 119 ALQDKGIHAQMARQ 132
AL+ G+ AQMA+Q
Sbjct: 66 ALKASGVQAQMAKQ 79
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 8/168 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL I L Q T +++ ++ + G I S K + DK T + GYGFV++ AL A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
V + LQ+K I AR + +NLY++ +P + +LES+ + ++++RI
Sbjct: 100 VSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRI 159
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L DN SKGVGF R + KD+ D I+ NGS G E + VKFA+
Sbjct: 160 LSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQITVKFAN 207
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ L+ DT D L + SQ+G I++ K IL T +C+GY FV + A A+ +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVK-ILRDLTQQCKGYAFVSMSNYTEAYNAMLSL 434
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 287 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 343
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 344 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 403
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 404 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 463
Query: 202 TLPGSKEPLLVKFADSGLKK 221
PG+ EP+ VKFA++ +K
Sbjct: 464 KPPGATEPITVKFANNPSQK 483
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 539 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 598
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 281
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQ---LSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
N T P+ T ++G+ T P SKTNL I L Q T +++ ++ + G I
Sbjct: 13 NMPTGPVQTTQNSYSGTQRYCTAPNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIE 72
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMAR--QQEQDPTN 139
S K + DK T + GYGFV++ AL AV + LQ+K I AR + +N
Sbjct: 73 SCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSN 132
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ +P + +LE + + ++++RIL DN SKGVGF R + KD+ D I+
Sbjct: 133 LYVSGIPKSMTLHELEGIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADTAIKTL 192
Query: 199 NGSTLPGSKEPLLVKFAD 216
NGS G E + VKFA+
Sbjct: 193 NGSIPTGCSEQITVKFAN 210
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ L DT D L + SQ+G I++ K IL + KC+GY FV + A A+ +L
Sbjct: 376 LFVYNLAADTDDTLLWQLFSQFGAILNVK-ILRDISQKCKGYAFVSMSTYTEAYNAMVSL 434
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 51 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 107
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 108 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 167
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 168 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 227
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 228 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 286
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 287 VKRFSPMTIDGMTSLAGINIPGHAGTGWCIFV 318
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 316 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 375
>gi|239613973|gb|EEQ90960.1| RNA binding protein MSSP-2 [Ajellomyces dermatitidis ER-3]
Length = 652
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKSSTNVYCTNVPIDWVEADLRRHFQPY-QVVSEKI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMI-QLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR ES++ ++++ Q N + G K LL++FAD+ +K+
Sbjct: 434 SRDEKTGVSKEVGFARFESREIAEKVLSQFHNITAQDGVK--LLLRFADTKAQKQ 486
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 124/266 (46%), Gaps = 18/266 (6%)
Query: 37 TTNNVQH-----NGSPG-TPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
T NN H N P +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 39 TCNNTAHGSATINNCPSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKL 98
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIA 143
+ DK T GYGFV++ A AV LQ K I AR NLY++
Sbjct: 99 VRDKITGPSLGYGFVNYVDPKDAKKAVNTLNGFRLQTKTIKVSYARPSSASIRDANLYVS 158
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGST 202
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 GLPKTMTQTELEQLFSQYGHIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 218
Query: 203 LPGSKEPLLVKFADSGLKKRGAGAGGPN-IYRGPGAEVRLWGRDSADSQLAYEHPMTPIP 261
PG+ EP+ VKFA++ +K PN Y P A+ R +AY P P
Sbjct: 219 PPGATEPVTVKFANNPSQKTNQAT--PNRRYPAPLAQQAQRFRLDNLLNIAYGVKRFP-P 275
Query: 262 ATIQYQRFTAGPGGTGHIPAGYTPWV 287
TI AG +GH G+ +V
Sbjct: 276 MTIDGMTALAGINISGHAGTGWCIFV 301
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
+++ L D + L M +G + + K I D TNKC+G+GFV +++ A+A++
Sbjct: 299 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
Query: 118 KA--LQDKGIHAQMARQQEQDP 137
L D+ + + P
Sbjct: 359 NGYRLGDRVLQVSFKTNKTHKP 380
>gi|327353323|gb|EGE82180.1| RNA binding protein MSSP-2 [Ajellomyces dermatitidis ATCC 18188]
Length = 652
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKSSTNVYCTNVPIDWVEADLRRHFQPY-QVVSEKI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMI-QLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR ES++ ++++ Q N + G K LL++FAD+ +K+
Sbjct: 434 SRDEKTGVSKEVGFARFESREIAEKVLSQFHNITAQDGVK--LLLRFADTKAQKQ 486
>gi|261193389|ref|XP_002623100.1| RNA binding protein MSSP-2 [Ajellomyces dermatitidis SLH14081]
gi|239588705|gb|EEQ71348.1| RNA binding protein MSSP-2 [Ajellomyces dermatitidis SLH14081]
Length = 652
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKSSTNVYCTNVPIDWVEADLRRHFQPY-QVVSEKI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMI-QLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD SK VGFAR ES++ ++++ Q N + G K LL++FAD+ +K+
Sbjct: 434 SRDEKTGVSKEVGFARFESREIAEKVLSQFHNITAQDGVK--LLLRFADTKAQKQ 486
>gi|212539816|ref|XP_002150063.1| RNA binding protein MSSP-2, putative [Talaromyces marneffei ATCC
18224]
gi|210067362|gb|EEA21454.1| RNA binding protein MSSP-2, putative [Talaromyces marneffei ATCC
18224]
Length = 577
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 14/174 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+ FV +FES
Sbjct: 240 TNVYIRGFPPETTDEMLHAYASRFGEIDRCKAIVDLDTGLCKGFAFVQFYNFESCENCIR 299
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G Y L + K ++++ ++++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 300 GFYYLGYQASFAQKSRNSRLKDLEDRNSTNIYCTNVPIEWSEADLRRHFEPY-RVVSEKI 358
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR ES++ +++++ F N + G K LL++FAD+ +K
Sbjct: 359 SRDEKTGVSKEVGFARFESREIAERVVEEFHNVAGKDGHK--LLLRFADTKAQK 410
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL I L Q + +++ ++ S G I S K + DK T + GYGFV++ AL A
Sbjct: 101 SKTNLIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQSLGYGFVNYVRQEDALKA 160
Query: 117 VKA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
V LQ+K I AR + NLY++ LP + + +LE+L Y ++++RI
Sbjct: 161 VSTLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLPKSMSQPELENLFRPYGQIITSRI 220
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L DN SKGVGF R + K + + I NG+ G EP+ VKFA+
Sbjct: 221 LSDNITGLSKGVGFVRFDRKGEAEVAISKLNGTIPAGCTEPVTVKFAN 268
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T D L + +G ++S K I D T KC+GYGFV A+ A+ AL
Sbjct: 390 IFVYNLAPETEDSILWQLFGPFGAVLSVKIIRDFATGKCKGYGFVTMGQYEDAVTAITAL 449
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 281
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 23 NTANGPTTVNN---NCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 79
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 80 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 139
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 140 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 199
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 200 KPPGATEPITVKFANN 215
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 275 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 334
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 249
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 250 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 281
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 27 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 83
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 84 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 143
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 144 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 204 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 263
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 264 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 295
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 293 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 352
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 99 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 158
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 219 KPPGATEPITVKFANN 234
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 295 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 354
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 99 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 158
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Query: 202 TLPGSKEPLLVKFADSGLKK 221
PG+ EP+ VKFA++ +K
Sbjct: 219 KPPGATEPITVKFANNPSQK 238
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 30 NGGTHPITTN---NVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
NG T TTN + +N S +G + SKTNL + L Q+ T ++L ++ G I
Sbjct: 7 NGPTCNNTTNGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIE 66
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTN 139
S K + DK T + GYGFV++ A A+ LQ K I AR N
Sbjct: 67 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDAN 126
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLA 252
NG PG+ EP+ VKFA++ +K PN Y GP A+ R +A
Sbjct: 187 NGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMA 246
Query: 253 YEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
Y P TI AG GH G+ +V
Sbjct: 247 YGVKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 281
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 267 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 326
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 27 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 83
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 84 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 143
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 144 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 204 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 262
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 263 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 294
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 292 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 99 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 158
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 219 KPPGATEPITVKFANN 234
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESGGYA 113
SKTNL I L Q T+++L ++ ++ G I S K + D+ T + GYGF+D+ A
Sbjct: 501 SKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQSLGYGFIDYVHPRDAERA 560
Query: 114 LAAVKALQ--DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ + LQ K I AR NLYI LP N + +LE L + Y ++++RI
Sbjct: 561 VCLLNGLQCPPKTIKVSYARPNSSSIRDANLYINGLPKNMTQKELEHLFSPYGHIITSRI 620
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D + TS+GVGF R K + ++ I+ NG G EPL+V+FA
Sbjct: 621 LTDKASGTSRGVGFIRFNMKSEAEEAIKALNGQKPCGILEPLVVRFA 667
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L D+ + L + +G + + K I D TNKC+ +GFV S A A+ +L
Sbjct: 738 IFIYNLAPDSDENILWQLFGPFGAVSNVKIIRDFNTNKCKRFGFVTMTSYNEAALAIASL 797
>gi|221112748|ref|XP_002162771.1| PREDICTED: ELAV-like protein 3-like [Hydra magnipapillata]
Length = 376
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 37 TTNNVQHNGSPGTPTGPEQ----LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
N + H G P EQ + TNL I L Q+ T+++L + S GP+ S K I
Sbjct: 19 VINGLAHVNLSGYPLNLEQDPDDENPTNLIINYLPQEMTEEELRTLFSSVGPLESCKLIR 78
Query: 93 DKTTNKCRGYGFVDFESGGYALAAVKALQ-----DKGIHAQMARQQ--EQDPTNLYIANL 145
DK T GY FV+++ A A+++LQ +K I +AR E NLY++ L
Sbjct: 79 DKVTRASLGYAFVNYQHAADARKAIESLQGMKLTNKTIKVSVARPSCTEIKNANLYVSGL 138
Query: 146 PLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGST--L 203
PL E DL L A Y ++++ ++L + + S+GVGF R + ++ + I N +
Sbjct: 139 PLTCNENDLRELFASYGSIITIKVLYEESGQSRGVGFVRFDKRNDAEAAINGLNNRIPEI 198
Query: 204 PGSKEPLLVKFAD 216
G+ +PL VKFA+
Sbjct: 199 NGAIKPLTVKFAN 211
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
+++ L D ++ L + S++G I ST+ + D+ T KC+G+GFV+
Sbjct: 290 VFVYNLPSDASELTLFQLFSKFGAIQSTRVVYDENTKKCKGFGFVNM 336
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 41 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 97
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 98 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 157
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 158 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 217
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 218 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 277
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 278 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 309
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 27 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 83
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 84 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 143
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 144 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 204 KPPGATEPITVKFANN 219
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 125/272 (45%), Gaps = 17/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 99 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 158
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 218
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYEH 255
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 219 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGV 278
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 279 KSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 310
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+++L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 337
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 41 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 97
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 98 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 157
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 158 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 217
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 218 KPPGATEPITVKFANN 233
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 306 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 365
>gi|121699874|ref|XP_001268202.1| RNA binding protein MSSP-2, putative [Aspergillus clavatus NRRL 1]
gi|119396344|gb|EAW06776.1| RNA binding protein MSSP-2, putative [Aspergillus clavatus NRRL 1]
Length = 528
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 12/173 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L +++G I KAI+D T C+G+GFV +FES
Sbjct: 266 TNVYIRGFLPETTDEMLHAYAARFGKIDRCKAIVDLDTGLCKGFGFVQYFNFESCENCIR 325
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 326 GFFYLGYQASFAQKSRNSRLKDLEDRTSTNIYCTNIPIDWTEADLRHHFEPY-RVVSEKI 384
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD+ SK VGFAR E+++ ++++ F+ +T + LL++FAD+ +K
Sbjct: 385 SRDDKTGVSKEVGFARFETREIAEKVLNEFHNATADDGVK-LLLRFADTKAQK 436
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 104/199 (52%), Gaps = 11/199 (5%)
Query: 30 NGGTHPITTN---NVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
NG T TTN + +N S +G + SKTNL + L Q+ T ++L ++ G I
Sbjct: 7 NGPTCNNTTNGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIE 66
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTN 139
S K + DK T + GYGFV++ A A+ LQ K I AR N
Sbjct: 67 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDAN 126
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186
Query: 199 NGSTLPGSKEPLLVKFADS 217
NG PG+ EP+ VKFA++
Sbjct: 187 NGQKPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 27 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 83
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 84 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 143
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 144 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 203
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 204 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 262
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 263 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 294
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 292 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 70 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 126
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 127 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 186
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 187 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 246
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 247 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 305
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 306 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 337
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 335 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 394
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+++L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIRSL 324
>gi|303313417|ref|XP_003066720.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106382|gb|EER24575.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 639
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG + TD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 305 TNVYIRGFLPEITDEMLYAYASRFGKIDRCKAIVDLDTGLCKGFGFVQFFSFEACENCIR 364
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 365 GFFHLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNVPIEWVEADLRRHFEPY-RVVSEKI 423
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
R+ N SK VGFAR E++D ++++ F N ++ G K L+++FAD+ +K+
Sbjct: 424 SREENTGISKEVGFARFETRDIAEKVLAEFHNVTSKDGVK--LMLRFADTKAQKQ 476
>gi|295667661|ref|XP_002794380.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286486|gb|EEH42052.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 533
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 293 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 352
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 353 GFFHLGYQASFAQKSRNSRLKDLEDKCSTNVYCTNVPIDWVEADLRRHFQPY-QVVSEKI 411
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR ES++ ++++ F+ T + LL++FAD+ +K
Sbjct: 412 SRDEKTGVSKEVGFARFESREVAEKVLSQFHNVTAKDGVK-LLLRFADTKAQK 463
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 81 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 137
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 138 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 197
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 198 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 257
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 258 KPPGATEPITVKFANN 273
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 346 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 405
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|320036331|gb|EFW18270.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 639
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG + TD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 305 TNVYIRGFLPEITDEMLYAYASRFGKIDRCKAIVDLDTGLCKGFGFVQFFSFEACENCIR 364
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 365 GFFHLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNVPIEWVEADLRRHFEPY-RVVSEKI 423
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
R+ N SK VGFAR E++D ++++ F N ++ G K L+++FAD+ +K+
Sbjct: 424 SREENTGISKEVGFARFETRDIAEKVLAEFHNVTSKDGVK--LMLRFADTKAQKQ 476
>gi|392864320|gb|EAS34851.2| RNA binding protein MSSP-2 [Coccidioides immitis RS]
Length = 639
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG + TD+ L S++G I KAI+D T C+G+GFV F S
Sbjct: 305 TNVYIRGFLPEITDEMLYAYASRFGKIDRCKAIVDLDTGLCKGFGFVQFFSFEACENCIR 364
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 365 GFFHLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNVPIEWVEADLRRHFEPY-RVVSEKI 423
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
R+ N SK VGFAR E++D ++++ F N ++ G K L+++FAD+ +K+
Sbjct: 424 SREENTGISKEVGFARFETRDIAEKVLAEFHNVTSKDGVK--LMLRFADTKAQKQ 476
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 32/210 (15%)
Query: 33 THPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
T+ I+ +N Q+ GS ++ SKTNL + L Q T +++ ++ S G + S K I
Sbjct: 9 TNGISADNQQNGGS-------QEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIR 61
Query: 93 DKTTN-----------------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMA 130
DK T + GYGFV+++ A A+ L Q+K I A
Sbjct: 62 DKVTENALIHTFLLRFQISHSGQSLGYGFVNYQRVEDASKAINTLNGLRLQNKQIKVSFA 121
Query: 131 RQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLES 187
R + NLY++ LP N + DLESL + Y ++++RIL DN SKGVGF R +
Sbjct: 122 RPSSEAIKGANLYVSGLPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ 181
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + ++ I+ NG+ GS EP+ VKFA++
Sbjct: 182 RVEAEKAIKELNGTIPKGSTEPITVKFANN 211
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 6 YHRVSNATSPANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRG 65
Y RV +A+ NT NG + N Q S P+ E + NLY+ G
Sbjct: 93 YQRVEDASKAINTL----------NG----LRLQNKQIKVSFARPSS-EAIKGANLYVSG 137
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L ++ DL ++ S YG II+++ + D T +G GF+ F+ A A+K L
Sbjct: 138 LPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKEL 192
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 337
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 21 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 77
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 78 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 137
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 138 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 197
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 198 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 256
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 257 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 288
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 286 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 345
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q T+KDL M GPI S + + D T G+GFV+F A A+
Sbjct: 60 KTNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAI 119
Query: 118 KA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ L++K + AR +D TNLY+ NLP E LE++ KY +V IL
Sbjct: 120 ETFNGYQLRNKRLKVSYARPSGEDIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKHIL 179
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
RD +N T +GV F R + +++ + I N G EPL VK A+ K++
Sbjct: 180 RDKSNGTPRGVAFVRFDKREEAQEAIAALNNVIPEGGSEPLCVKVAEEHGKQK 232
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 108/210 (51%), Gaps = 32/210 (15%)
Query: 33 THPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
T+ I+ +N Q+ GS ++ SKTNL + L Q T +++ ++ S G + S K I
Sbjct: 9 TNGISADNQQNGGS-------QEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIR 61
Query: 93 DKTTN-----------------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMA 130
DK T + GYGFV+++ A A+ L Q+K I A
Sbjct: 62 DKVTGESLMYTFLLRFQIFHSGQSLGYGFVNYQRVEDASKAINTLNGLRLQNKQIKVSFA 121
Query: 131 RQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLES 187
R + NLY++ LP N + DLESL + Y ++++RIL DN SKGVGF R +
Sbjct: 122 RPSSEAIKGANLYVSGLPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ 181
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + ++ I+ NG+ GS EP+ VKFA++
Sbjct: 182 RVEAEKAIKELNGTIPKGSTEPITVKFANN 211
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 6 YHRVSNATSPANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRG 65
Y RV +A+ NT NG + N Q S P+ E + NLY+ G
Sbjct: 93 YQRVEDASKAINTL----------NG----LRLQNKQIKVSFARPSS-EAIKGANLYVSG 137
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L ++ DL ++ S YG II+++ + D T +G GF+ F+ A A+K L
Sbjct: 138 LPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKEL 192
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 337
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 25 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 84
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
AV LQ K I AR + NLYI+ LP N + D+E + +++ +++
Sbjct: 85 ERAVNTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIIN 144
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 145 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 194
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 256 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 315
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP N + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN--- 97
VQ NG G+ ++ SKTNL + L Q T +++ ++ S G + S K I DK T
Sbjct: 39 VQQNGRSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGNWT 98
Query: 98 -----------KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTN 139
+ GYGFV++ A A+ LQ+K I AR N
Sbjct: 99 NSGSFLSFDVGQSLGYGFVNYHRAEDADKAINTFNGLRLQNKTIKVSFARPSSDAIKGAN 158
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ L + + DLE+L Y ++++RIL DN SKGVGF R + + + ++ IQ
Sbjct: 159 LYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQL 218
Query: 199 NGSTLPGSKEPLLVKFADS 217
NG+T G+ EP+ VKFA++
Sbjct: 219 NGTTPKGASEPITVKFANN 237
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NLY+ GL++ T +DL + YG II+++ + D T +G GF+ F+ A A++
Sbjct: 158 NLYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQ 217
Query: 120 LQD---KGIHAQMARQQEQDPTN 139
L KG + + +P+N
Sbjct: 218 LNGTTPKGASEPITVKFANNPSN 240
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ AV++L
Sbjct: 301 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSL 360
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 2 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 61
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP N + D+E + +++ ++++R
Sbjct: 62 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSR 121
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 122 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 169
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL ++ T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 86 EVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 145
Query: 114 LAAVKAL 120
A+ +
Sbjct: 146 EEAITSF 152
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 250 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 309
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 17 NTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
N S S + G Q G H SP G + SKTNL + L Q T +++
Sbjct: 36 NQAQSQSQSPGPQTNGLH-----------SPSQQAGAGEDSKTNLIVNYLPQTMTQEEIR 84
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMAR 131
++ S G + S K I DK T + GYGFV++ A A+ LQ+K I AR
Sbjct: 85 SLFSSIGEVESCKLIRDKVTGQSLGYGFVNYVCAEAAEKAINTLNGLRLQNKTIKVSYAR 144
Query: 132 QQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNT--SKGVGFARLES 187
+ NLY++ LP + + DLE L A Y ++++RIL DN SKGVGF R +
Sbjct: 145 PSSEAIKGANLYVSGLPKSMTQQDLEQLFAPYGGIITSRILCDNITAGLSKGVGFVRFDQ 204
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + ++ I+ + + G+ E + VKFA++
Sbjct: 205 RVEAERAIKHLHNTIPEGATEAITVKFANN 234
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D TNKC+G+GFV + A+ A++ L
Sbjct: 314 IFVYNLAPDTEENLLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQTL 373
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+KDL ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 84 RTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 143
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ + +KY +V IL
Sbjct: 144 STLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNIL 203
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 204 KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 262
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G E++ +TNLY+ L ++ T+ + ++ S+YG I+ + DK T RG FV F+
Sbjct: 163 PSG-EEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDK 221
Query: 110 GGYALAAVKAL 120
A A+ L
Sbjct: 222 REEAQEAIARL 232
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+KDL ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 84 RTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 143
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ + +KY +V IL
Sbjct: 144 STLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNIL 203
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 204 KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 262
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G E++ +TNLY+ L ++ T+ + ++ S+YG I+ + DK T RG FV F+
Sbjct: 163 PSG-EEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDK 221
Query: 110 GGYALAAVKAL 120
A A+ L
Sbjct: 222 REEAQEAIARL 232
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 102/214 (47%), Gaps = 37/214 (17%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T ++ ++ S G + S K I DK T +
Sbjct: 10 VQQNGGSTLGQASQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDN-----------------------NN-------TSKGVGFA 183
LE+L + Y ++++RIL DN NN SKGVGF
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPEKMMMDPLNNLNRLPTGLSKGVGFI 189
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
R + + + ++ IQ NG+ GS EP+ VKFA++
Sbjct: 190 RFDQRVEAERAIQELNGTIPKGSSEPITVKFANN 223
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 297 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 356
>gi|320585960|gb|EFW98639.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 501
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 85/150 (56%), Gaps = 10/150 (6%)
Query: 81 QYGPIISTKAILDKTTNKCRGYGFVDFES---------GGYALAAVKALQDKGIHAQMAR 131
++G + +KAI+D T C+G+GF F G Y L + +A++
Sbjct: 256 RFGEVEQSKAIIDTATGACKGFGFAKFRDVKNSEKCIRGFYRLGYEVGFARESFNARLKA 315
Query: 132 QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKC 191
+ ++ TNLYI+NLP + E L + + VVS++ILRD+ S+GVGFAR +++D C
Sbjct: 316 EGDESSTNLYISNLPKDINEAMLNHIFEPF-HVVSSKILRDSMGNSRGVGFARFDTRDIC 374
Query: 192 DQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+++I+ FNG T+ + V++AD+ +K
Sbjct: 375 EKVIKHFNGITVGQDHFVMQVRYADTPSQK 404
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus purpuratus]
Length = 385
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
G ++ SKTNL + L Q+ ++ ++ ++G I S K + DK T + GYGFV++
Sbjct: 30 VGGDEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKP 89
Query: 111 GYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVT 163
AL AVK LQ K I AR Q NLYI+ +P ++ + DL++L +
Sbjct: 90 ADALKAVKTLNGLRLQCKTIKVSFARPSSQAIKDANLYISGIPKHYGQLDLDNLFNAFGR 149
Query: 164 VVSTRILRDNN-NTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++ +R+L D+ +GVGF R + + + ++ I+ NG+ G K+PL+VKFA++
Sbjct: 150 IICSRLLLDHECGRPRGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIVKFANN 204
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D D L + YG + + K + D+ +C+GYGFV+ + AL+A+ L
Sbjct: 304 IFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTL 363
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
+++ NLP + ++ L L Y V + +++RD N KG GF + + D+ I
Sbjct: 304 IFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTL 363
Query: 199 NGSTLPGSKEPLLVKFADSGLK 220
NG L G K L V F S K
Sbjct: 364 NGYQLNG-KRTLQVSFKSSKQK 384
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+KDL ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 112 RTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 171
Query: 118 KAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ + +KY +V IL
Sbjct: 172 NTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNIL 231
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 232 KDKITGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 290
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G E++ +TNLY+ L ++ T+ + ++ S+YG I+ + DK T RG FV F+
Sbjct: 191 PSG-EEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVAFVRFDK 249
Query: 110 GGYALAAVKALQ 121
A A+ L
Sbjct: 250 REEAQEAIARLH 261
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL I L Q+ T +++ + S G I S K + DK T + GYGFV++ A AV
Sbjct: 18 TNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVT 77
Query: 119 AL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+L Q+K I AR + NLY++ L + DLE+L + ++++RIL
Sbjct: 78 SLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILS 137
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + K + + I+ NG G EP+ VKFA+S
Sbjct: 138 DNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANS 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTN--------------LYIRGLTQDTTDKDLINMCSQ 81
ITT +Q + GT T P QL+ +++ L +T D L +
Sbjct: 259 ITTQLLQMAAATGTSTSPVQLAALANSTPCASVVGTGWCIFVYNLPPETEDAVLWQLFGP 318
Query: 82 YGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+G ++S K I D +T KC+GYGFV A+ A+ +L
Sbjct: 319 FGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSL 357
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL I L Q+ T +++ + S G I S K + DK T + GYGFV++ A AV
Sbjct: 49 TNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYIRQEDAYKAVT 108
Query: 119 AL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+L Q+K I AR + NLY++ L + DLE+L + ++++RIL
Sbjct: 109 SLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILS 168
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + K + + I+ NG G EP+ VKFA+S
Sbjct: 169 DNVTGISKGVGFVRFDRKSEAEDAIEKLNGKIPAGCTEPITVKFANS 215
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTN--------------LYIRGLTQDTTDKDLINMCSQ 81
ITT +Q + GT T P QL+ +++ L +T D L +
Sbjct: 290 ITTQLLQMAAATGTSTSPVQLAALANSTPCASVVGTGWCIFVYNLPPETEDAVLWQLFGP 349
Query: 82 YGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+G ++S K I D +T KC+GYGFV A+ A+ +L
Sbjct: 350 FGAVLSVKIIKDFSTGKCKGYGFVTMGQYEDAVTAITSL 388
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL I L Q T +DL N+ S G + S K I DK T + GYGFV++ A A
Sbjct: 86 SKTNLIINYLPQAMTQEDLRNLFSSIGELESCKLIRDKLTGQSLGYGFVNYVKAADAEKA 145
Query: 117 VKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ +L Q K I AR NLY++ LP + + DL+ + + ++++RI
Sbjct: 146 INSLNGLRMQQKTIKVSFARPSTPLIKDANLYVSGLPKSMTQEDLQRIFHPFGRIITSRI 205
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L + + S+GVGF R + + + + I NG+ G+K+P+ VKFA++ +K
Sbjct: 206 LVEPSTGMSRGVGFVRFDKRPEAENAISALNGTIPAGAKDPVTVKFANNPSQK 258
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T KC+GYGFV + A AV +L
Sbjct: 484 IFVYNLAPETDENILWQLFGPFGAVTSVKVIRDYQTQKCKGYGFVTMTNYEEAFIAVCSL 543
>gi|259489140|tpe|CBF89166.1| TPA: RNA binding protein MSSP-2, putative (AFU_orthologue;
AFUA_6G11030) [Aspergillus nidulans FGSC A4]
Length = 608
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV +FES
Sbjct: 271 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLDTGLCKGFGFVQYFNFESCENCIR 330
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 331 GFFYLGYQASFAQKSRNSRLKDLEDRSSTNIYCTNIPIDWTEADLRRHFEPY-RVVSEKI 389
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR E+++ ++++ F+ + + LL++FAD+ +K
Sbjct: 390 SRDEKTGVSKEVGFARFETREIAEKVLAEFH-NVVAEDGVKLLLRFADTKAQK 441
>gi|119471797|ref|XP_001258224.1| RNA binding protein MSSP-2, putative [Neosartorya fischeri NRRL
181]
gi|119406376|gb|EAW16327.1| RNA binding protein MSSP-2, putative [Neosartorya fischeri NRRL
181]
Length = 616
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG TTD+ L + +++G I KAI+D T C+G+GFV +FES
Sbjct: 280 TNVYIRGFLPQTTDEMLHSYAARFGKIDRCKAIVDLDTGLCKGFGFVQFYNFESCENCIR 339
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 340 GFFYLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNVPITWTEADLRHHFEPY-RVVSEKI 398
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR E+++ ++++ F+ G K LL++FAD+ +K
Sbjct: 399 SRDEKTGVSKEVGFARFETREIAEKVLGEFHNIAKNGVK--LLLRFADTKAQK 449
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-- 96
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVL 65
Query: 97 -------------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP- 137
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 PASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 125
Query: 138 -TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMI 195
NLY++ LP N + DLE + A Y ++++RIL DN + SKGVGF R + +++ ++ I
Sbjct: 126 GANLYVSGLPKNLSQPDLEGMFASYGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 185
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
Q NG T G EP+ VKFA++
Sbjct: 186 QELNGKTPKGYAEPITVKFANN 207
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL ++ + DL M + YG II+++ + D + +G GF+ F+ A
Sbjct: 122 ESIKGANLYVSGLPKNLSQPDLEGMFASYGKIITSRILCDNISGLSKGVGFIRFDQRNEA 181
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVT 163
A++ L K + +P + AN P N + + L Y+T
Sbjct: 182 ERAIQELNGK------TPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLT 225
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 272 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 331
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN + S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---SCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN + S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTINN---SCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 190 KPPGATEPITVKFANN 205
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 EKAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDAHEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLHQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 118 K 118
K
Sbjct: 306 K 306
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN--NVQHNGSPGTPTGPEQLSKTNLYIRGLT 67
S A P ++ T NG T T N N +N S + + SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINNCSSPVESSNTEDSKTNLIVNYLP 75
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQD 122
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT 135
Query: 123 KGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKG 179
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+G
Sbjct: 136 KTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 195
Query: 180 VGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
VGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 196 VGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 233
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 294 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 353
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL I L Q+ T +++ + S G I S K + DK T + GYGFV++ A AV
Sbjct: 49 TNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVT 108
Query: 119 A-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+ LQ+K I AR + NLY++ L + DLE+L + ++++RIL
Sbjct: 109 SLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILS 168
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + K + + I NG G EP+ VKFA+S
Sbjct: 169 DNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANS 215
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTN--------------LYIRGLTQDTTDKDLINMCSQ 81
ITT +Q + GT T P QL+ +++ L +T D L +
Sbjct: 290 ITTQLLQMAAATGTSTSPVQLAALANSTPCGSVVGTGWCIFVYNLPPETEDAVLWQLFGP 349
Query: 82 YGPIISTKA---ILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+G ++S KA I D +T KC+GYGFV A+ A+ +L
Sbjct: 350 FGAVLSVKAGIIIKDFSTGKCKGYGFVTMGQYEDAVTAITSL 391
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q + ++L ++ S G + S K I DK GYGFV+F + A+ A
Sbjct: 53 ARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVRA 112
Query: 117 VKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L Q K + AR + NLYI+ LP + DLE + + Y ++++R+
Sbjct: 113 INTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRV 172
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
L D + S+GV F R + + + + I+ NG T PGS EP+ VKFA + + RG+
Sbjct: 173 LVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNPNQARGS 228
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + + +DL +M S YG II+++ ++D+ + RG F+ F+ A
Sbjct: 136 EMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEA 195
Query: 114 LAAVKAL 120
A+K L
Sbjct: 196 EDAIKHL 202
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L + +G +++ K I D T+KC+G+GFV + A A+ +L
Sbjct: 278 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 337
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN--NVQHNGSPGTPTGPEQLSKTNLYIRGLT 67
S A P ++ T NG T T N N +N S + + SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINNCSSPVESSNTEDSKTNLIVNYLP 75
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQD 122
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 76 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT 135
Query: 123 KGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKG 179
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+G
Sbjct: 136 KTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 195
Query: 180 VGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
VGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 196 VGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 233
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 293 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 352
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q + ++L ++ S G + S K I DK GYGFV+F + A+ A
Sbjct: 29 ARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPSDAVRA 88
Query: 117 VKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L Q K + AR + NLYI+ LP + DLE + + Y ++++R+
Sbjct: 89 INTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRV 148
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
L D + S+GV F R + + + + I+ NG T PGS EP+ VKFA + + RG+
Sbjct: 149 LVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNPNQARGS 204
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + + +DL +M S YG II+++ ++D+ + RG F+ F+ A
Sbjct: 112 EMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEA 171
Query: 114 LAAVKAL 120
A+K L
Sbjct: 172 EDAIKHL 178
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L + +G +++ K I D T+KC+G+GFV + A A+ +L
Sbjct: 254 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 313
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q+ T+KDL M GPI S + + D T G+GFV+F A A
Sbjct: 61 ARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L++K + AR D TNLY+ NLP + LE++ KY +V I
Sbjct: 121 IDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 180
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD N+ T +GV F R + +++ + I N G EPL VK A+ K++ A
Sbjct: 181 LRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAA 236
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G + + +TNLY+ L + TD L + +YG I+ + DK + RG FV ++
Sbjct: 141 PSG-DDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDK 199
Query: 110 GGYALAAVKALQD 122
A A+ AL +
Sbjct: 200 REEAQEAIAALNN 212
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-----------NKCRGYGFV 105
SKTNL + L Q T +++ ++ S G + S K I DK T + GYGFV
Sbjct: 29 SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTVPGVITSPLLTGQSLGYGFV 88
Query: 106 DFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLL 158
++ A A+ L Q+K I AR + NLY++ LP N + DLESL
Sbjct: 89 NYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLESLF 148
Query: 159 AKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ Y ++++RIL DN SKGVGF R + + + ++ IQ NG+ GS EP+ VKFA++
Sbjct: 149 SPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIPKGSTEPITVKFANN 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL ++ T +DL ++ S YG II+++ + D T +G GF+ F+
Sbjct: 123 EAIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ---R 179
Query: 114 LAAVKALQD 122
L A +A+Q+
Sbjct: 180 LEAERAIQE 188
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 269 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 328
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL L Q+ T ++L ++ G I S K
Sbjct: 13 NTANGPTTVNN---NCSSPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCK 69
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 70 LVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 129
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 189
Query: 202 TLPGSKEPLLVKFADSGLKKRGAGA-----GGPNIYRGPGAEVRLWGRDSADSQLAYEHP 256
PG+ EP+ VKFA++ +K PN R PG + R D+ L +
Sbjct: 190 KPPGATEPITVKFANNPSQKTNQAILSQLYQSPN-RRYPGPLAQQAQRFRLDNLLNMAYG 248
Query: 257 MTPI-PATIQYQRFTAGPGGTGHIPAGYTPWV 287
+ P TI AG GH G+ +V
Sbjct: 249 VKRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 280
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q+ T+KDL M GPI S + + D T G+GFV+F A A
Sbjct: 61 ARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L++K + AR D TNLY+ NLP + LE++ KY +V I
Sbjct: 121 IDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 180
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD N+ T +GV F R + +++ + I N G EPL VK A+ K++ A
Sbjct: 181 LRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAA 236
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G + + +TNLY+ L + TD L + +YG I+ + DK + RG FV ++
Sbjct: 141 PSG-DDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDK 199
Query: 110 GGYALAAVKALQD 122
A A+ AL +
Sbjct: 200 REEAQEAIAALNN 212
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWRMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 11/178 (6%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
G ++ SKTNL + L Q+ ++ ++ ++G I S K + DK T + GYGFV++
Sbjct: 30 VGGDEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQSLGYGFVNYLKP 89
Query: 111 GYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVT 163
AL AVK LQ K I AR Q NLYI+ +P ++ + DL++L +
Sbjct: 90 ADALKAVKTLNGLRLQCKTIKVSFARPSSQAIKDANLYISGIPKHYGQLDLDNLFNAFGR 149
Query: 164 VVSTRILRDN----NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++ +R+L D+ + +GVGF R + + + ++ I+ NG+ G K+PL+VKFA++
Sbjct: 150 IICSRLLLDHECGESGRPRGVGFVRYDRRCEAEKAIEGLNGNIPHGGKDPLIVKFANN 207
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D D L + YG + + K + D+ +C+GYGFV+ + AL+A+ L
Sbjct: 286 IFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTL 345
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
+++ NLP + ++ L L Y V + +++RD N KG GF + + D+ I
Sbjct: 286 IFVYNLPADCEDGLLWQLFGPYGAVTNVKVVRDQPNQRCKGYGFVNMLNYDEALSAINTL 345
Query: 199 NGSTLPGSKEPLLVKFADSGLK 220
NG L G K L V F S K
Sbjct: 346 NGYQLNG-KRTLQVSFKSSKQK 366
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 33 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 92
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 93 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 152
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 153 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 202
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 264 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 323
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q+ T+KDL M GPI S + + D T G+GFV+F A A
Sbjct: 15 ARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 74
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L++K + AR D TNLY+ NLP + LE++ KY +V I
Sbjct: 75 IDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 134
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD N+ T +GV F R + +++ + I N G EPL VK A+ K++ A
Sbjct: 135 LRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAA 190
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G + + +TNLY+ L + TD L + +YG I+ + DK + RG FV ++
Sbjct: 95 PSG-DDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDK 153
Query: 110 GGYALAAVKALQD 122
A A+ AL +
Sbjct: 154 REEAQEAIAALNN 166
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 136 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 195
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 196 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 255
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 256 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 303
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 220 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 279
Query: 114 LAAVKAL 120
A+ +
Sbjct: 280 EEAITSF 286
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 365 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 424
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like generic
protein; AltName: Full=Hu-antigen R; Short=HuR; AltName:
Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 132/295 (44%), Gaps = 17/295 (5%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN---NVQHNGSPGTPTGPEQLSKTNLYIRGL 66
S A P ++ T NG T T N + +N S +G + SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANGPTTITNNCSSPVDSGNTEDSKTNLIVNYL 75
Query: 67 TQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQ 121
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 76 PQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQ 135
Query: 122 DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSK 178
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+
Sbjct: 136 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 195
Query: 179 GVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IY 232
GVGF R + + + ++ I+ NG P + EP+ VKFA++ +K PN Y
Sbjct: 196 GVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITVKFANNPSQKTNQAILSQLYQSPNRRY 255
Query: 233 RGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
GP A+ R +AY P TI AG GH G+ +V
Sbjct: 256 PGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTIDGMTSLAGINIPGHAGTGWCIFV 310
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q+ T+KDL M GPI S + + D T G+GFV+F A A
Sbjct: 61 ARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ L++K + AR D TNLY+ NLP + LE++ KY +V I
Sbjct: 121 IDTFNGYQLRNKRLKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHI 180
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD N+ T +GV F R + +++ + I N G EPL VK A+ K++ A
Sbjct: 181 LRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAA 236
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+G + + +TNLY+ L + TD L + +YG I+ + DK + RG FV ++
Sbjct: 141 PSG-DDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDK 199
Query: 110 GGYALAAVKALQD 122
A A+ AL +
Sbjct: 200 REEAQEAIAALNN 212
>gi|195566472|ref|XP_002106804.1| GD17091 [Drosophila simulans]
gi|194204196|gb|EDX17772.1| GD17091 [Drosophila simulans]
Length = 371
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 27/205 (13%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN- 97
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK T
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVTRN 65
Query: 98 -----------------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ 135
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 LVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSE 125
Query: 136 DP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCD 192
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ +
Sbjct: 126 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 185
Query: 193 QMIQLFNGSTLPGSKEPLLVKFADS 217
+ IQ NG T G EP+ VKFA++
Sbjct: 186 RAIQELNGKTPKGYAEPITVKFANN 210
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+K+L +M GP+ S + + D T G+GFV++ AL A+
Sbjct: 81 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 140
Query: 118 KAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E +E + +K+ +V IL
Sbjct: 141 NTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNIL 200
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ I +G+ G EPL VK A+ K++ A G
Sbjct: 201 KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 259
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+K + + S++G I+ + DK T RG FV
Sbjct: 156 SFARPSG-EEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFV 214
Query: 106 DFESGGYALAAVKAL 120
++ A A+ L
Sbjct: 215 RYDKREEAQDAINQL 229
>gi|317031114|ref|XP_001392899.2| polyadenylate-binding protein [Aspergillus niger CBS 513.88]
Length = 511
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV +FES
Sbjct: 177 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLDTGLCKGFGFVQYYNFESCENCIR 236
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y V+S +I
Sbjct: 237 GFFYLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNIPIEWTEADLRHHFEPY-HVISEKI 295
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR E+++ ++++ ++ +T + LL++FAD+ +K
Sbjct: 296 SRDEKTGVSKEVGFARFETREIAEKVLSEYHNATAKDGVK-LLLRFADTKAQK 347
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 259 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 318
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
AV LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAVNTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 9/187 (4%)
Query: 39 NNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNK 98
N + + SP + E SKTNL + L Q+ T ++L ++ G I S K + DK T +
Sbjct: 19 NTINNCSSPVESSNTED-SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 77
Query: 99 CRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKE 151
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 78 SLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQ 137
Query: 152 CDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPL 210
+LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG PG+ EP+
Sbjct: 138 KELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPI 197
Query: 211 LVKFADS 217
VKFA++
Sbjct: 198 TVKFANN 204
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD D++L ++ GPI + + + D T GYGFVDF S AL A
Sbjct: 76 SGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRA 135
Query: 117 VKAL-----QDKGIHAQMAR---QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ L ++K I AR +Q +D TNLY+ NL + + LE++ KY +V
Sbjct: 136 INNLNGITVRNKRIKVSFARPGGEQLRD-TNLYVTNLSRSITDEQLETIFGKYGQIVQKN 194
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAG 227
ILRD + T +GV F R +++ + I N G +PL V+ A+ K +G
Sbjct: 195 ILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEEHGKSKGHVYM 254
Query: 228 GPN 230
PN
Sbjct: 255 APN 257
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQL TNLY+ L++ TD+ L + +YG I+ + DK T RG F+ F
Sbjct: 157 GGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKRE 216
Query: 112 YALAAVKALQD 122
A A+ AL +
Sbjct: 217 EAQEAISALNN 227
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 245 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 304
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P G E SKTNL + L Q+ T ++L ++ G I S K + DK T + GYGFV++
Sbjct: 60 PNGSED-SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYME 118
Query: 110 GGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYV 162
A A+ LQ K I AR NLY++ LP + +LE L +++
Sbjct: 119 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFG 178
Query: 163 TVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++++RIL D S+GVGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 179 RIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANN 234
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 41 VQHNGSPGTPTGPEQLSKTNL----------YIRGLTQDTTDKDLINMCSQYGPIISTKA 90
V+ SP T G L+ NL ++ L D + L M +G + + K
Sbjct: 278 VKSRFSPMTIDGVTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKV 337
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
I D TNKC+G+GFV + A A+ +L
Sbjct: 338 IRDFNTNKCKGFGFVTMTNYDEAAVAIASL 367
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+KDL ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 84 RTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 143
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ + +KY +V IL
Sbjct: 144 STLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNIL 203
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 204 KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 262
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+ + ++ S+YG I+ + DK T RG FV
Sbjct: 159 SFARPSG-EEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFV 217
Query: 106 DFESGGYALAAVKAL 120
F+ A A+ L
Sbjct: 218 RFDKREEAQEAIARL 232
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+K+L +M GP+ S + + D T G+GFV++ AL A+
Sbjct: 98 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 157
Query: 118 KAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E +E + +K+ +V IL
Sbjct: 158 NTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNIL 217
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ I +G+ G EPL VK A+ K++ A G
Sbjct: 218 KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 276
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+K + + S++G I+ + DK T RG FV
Sbjct: 173 SFARPSG-EEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFV 231
Query: 106 DFESGGYALAAVKAL 120
++ A A+ L
Sbjct: 232 RYDKREEAQDAINQL 246
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 37 TTNNVQH------NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
T NN H N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 39 TCNNTAHSSNTINNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKL 98
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIA 143
+ DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 99 VRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVS 158
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGST 202
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 GLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 218
Query: 203 LPGSKEPLLVKFADS 217
P + EP+ VKFA++
Sbjct: 219 PPSAAEPITVKFANN 233
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTN-KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNLY 141
+ DK T + GYGFV++ A A+ L Q K I AR NLY
Sbjct: 99 LVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 158
Query: 142 IANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNG 200
++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 VSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 218
Query: 201 STLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYE 254
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 219 QKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYG 278
Query: 255 HPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 279 VKSRFSPMTIDGMTSLAGINIPGHAGTGWCIFV 311
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 309 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 368
>gi|358056824|dbj|GAA97174.1| hypothetical protein E5Q_03850 [Mixia osmundae IAM 14324]
Length = 420
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 36/181 (19%)
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR 131
D DL+ + +G ++S K ILD +G+GF+ + A A +K L+ +G+ + A+
Sbjct: 61 DADLVRLGDHFGEVLSVKVILD-ANGMSKGFGFILMATSEAATALIKHLRSQGVASHFAK 119
Query: 132 QQEQ--------------DPTNLYIANLPLNFKECDLESLL-------AKYVTVVSTRIL 170
+ + D TNLY++NLP +++E DL +L +V+V+S R+L
Sbjct: 120 EMYKAGSKRQGKHHKTGTDKTNLYLSNLPKSWQEEDLRNLFLHTFAAQKHHVSVLSVRLL 179
Query: 171 RDN--------------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
R + N SKG+GFARL + +C Q IQ +G L + PL ++FAD
Sbjct: 180 RSDFHAKKRGYPTSSPSANESKGIGFARLGTNQQCLQAIQWLSGRVLKSAILPLQIRFAD 239
Query: 217 S 217
S
Sbjct: 240 S 240
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 7 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 66
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 67 ERAISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 126
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 127 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 176
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 255 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 314
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD D++L ++ GPI + + + D T GYGFVDF S AL A
Sbjct: 62 SGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRA 121
Query: 117 VKAL-----QDKGIHAQMAR---QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ L ++K I AR +Q +D TNLY+ NL + + LE++ KY +V
Sbjct: 122 INNLNGITVRNKRIKVSFARPGGEQLRD-TNLYVTNLSRSITDEQLETIFGKYGQIVQKN 180
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAG 227
ILRD + T +GV F R +++ + I N G +PL V+ A+ K +G
Sbjct: 181 ILRDKHTGTPRGVAFIRFNKREEAQEAISALNNVIPEGGTQPLTVRVAEEHGKSKGHVYM 240
Query: 228 GPN 230
PN
Sbjct: 241 APN 243
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G EQL TNLY+ L++ TD+ L + +YG I+ + DK T RG F+ F
Sbjct: 143 GGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKRE 202
Query: 112 YALAAVKALQD 122
A A+ AL +
Sbjct: 203 EAQEAISALNN 213
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 18 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 77
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 78 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 137
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 138 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 187
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 249 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 308
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P G E SKTNL + L Q+ T ++L ++ G I S K + DK T + GYGFV++
Sbjct: 31 PNGSED-SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYME 89
Query: 110 GGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYV 162
A A+ LQ K I AR NLY++ LP + +LE L +++
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQFG 149
Query: 163 TVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++++RIL D S+GVGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 150 RIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGLNGQKPPGATEPITVKFANN 205
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 41 VQHNGSPGTPTGPEQLSKTNL----------YIRGLTQDTTDKDLINMCSQYGPIISTKA 90
V+ SP T G L+ NL ++ L D + L M +G + + K
Sbjct: 249 VKSRFSPMTIDGVTSLAGINLPAHAGTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKV 308
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
I D TNKC+G+GFV + A A+ +L
Sbjct: 309 IRDFNTNKCKGFGFVTMTNYDEAAVAIASL 338
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 63 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 122
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 123 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 182
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 183 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 232
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 294 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 353
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia vitripennis]
Length = 383
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 41/218 (18%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
VQ NG ++ SKTNL + L Q T +++ ++ S G + S K I DK T +
Sbjct: 10 VQQNGGSNLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKLTGQSL 69
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ+K I AR + NLY++ LP N + D
Sbjct: 70 GYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQD 129
Query: 154 LESLLAKYVTVVSTRILRDNNNT----------------------------------SKG 179
LE+L + Y ++++RIL DN SKG
Sbjct: 130 LENLFSPYGRIITSRILCDNITVRQFVTGGGDNLPETRENSPATLGCVRLALDIAGLSKG 189
Query: 180 VGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
VGF R + + + ++ IQ NG+ GS EP+ VKFA++
Sbjct: 190 VGFIRFDQRVEAERAIQELNGTIPKGSTEPITVKFANN 227
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 302 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYEEAVVAIQSL 361
>gi|195173668|ref|XP_002027609.1| GL22975 [Drosophila persimilis]
gi|194114534|gb|EDW36577.1| GL22975 [Drosophila persimilis]
Length = 385
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-- 96
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVL 65
Query: 97 -------------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP- 137
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 PASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 125
Query: 138 -TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMI 195
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ ++ I
Sbjct: 126 GANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 185
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
Q NG T G EP+ VKFA++
Sbjct: 186 QELNGKTPKGYAEPITVKFANN 207
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 304 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 363
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q+ +K+L ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 94 RTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 153
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ L +KY +V IL
Sbjct: 154 STLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKNIL 213
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
RD +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 214 RDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 272
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+ + + S+YG I+ + DK T RG FV
Sbjct: 169 SFARPSG-EEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTGLPRGVAFV 227
Query: 106 DFESGGYALAAVKAL 120
F+ A A+ L
Sbjct: 228 RFDKREEAQEAIARL 242
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 115/256 (44%), Gaps = 24/256 (9%)
Query: 45 GSPGTPTGPE-QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
GSP TG + SKTNL + L Q T ++ ++ S G + S K I DK T + GYG
Sbjct: 12 GSPDGRTGSSTEDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGYG 71
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR Q NLY++ LP + DLE
Sbjct: 72 FVNYVKPQDAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQQDLEG 131
Query: 157 LLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L + ++++RIL D S+GVGF R + + + ++ I NG G+ +P+ VKFA
Sbjct: 132 LFEAHGRIITSRILFDPVTGQSRGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKFA 191
Query: 216 DSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGG 275
++ + A A Y P Y PM A +Y A P G
Sbjct: 192 NNPSQNH-AKALQQAAYLAPARR--------------YLGPMLHQTARFRYSPMGADPMG 236
Query: 276 TGHIPAGYTPWVPTQY 291
G+IP G T + Y
Sbjct: 237 VGNIPNGGTGFCIFVY 252
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT D L + +G + + K I D TNKC+G+GFV A+ A+ L
Sbjct: 249 IFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 308
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 28/212 (13%)
Query: 22 SSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQ 81
++S T QNGG+ N SP +P G E SKTNL + L Q T +++ ++ S
Sbjct: 17 TNSQTSQQNGGS----------NHSPVSP-GAED-SKTNLIVNYLPQTMTQEEIRSLFSS 64
Query: 82 YGPIISTKAILDKTTNK------CR--GYGFVDFESGGYALAAVKAL-----QDKGIHAQ 128
G + S K I DK T++ C+ GYGFV+++ A A+ L Q+K I
Sbjct: 65 IGEVESCKLIRDKATDQSSGTSSCQSLGYGFVNYKRPEDAEKAINTLNGLRLQNKTIKVS 124
Query: 129 MARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARL 185
AR + NLY++ LP + E +L SL + ++++ RIL DN SKGVGF R
Sbjct: 125 YARPSSESIKGANLYLSGLPKSMSEPELRSLFSSCGSIINCRILCDNTTGLSKGVGFIRF 184
Query: 186 ESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 185 DQRVEAERAIKQLNGKVPEGATEPITVKFANA 216
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL + ++ +L ++ S G II+ + + D TT +G GF+ F+ A
Sbjct: 131 ESIKGANLYLSGLPKSMSEPELRSLFSSCGSIINCRILCDNTTGLSKGVGFIRFDQRVEA 190
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLP 146
A+K L K + +P + AN P
Sbjct: 191 ERAIKQLNGK------VPEGATEPITVKFANAP 217
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T KC+G+GFV + AL A+++L
Sbjct: 281 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDFQTQKCKGFGFVTMTNYDEALMAIQSL 340
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL I L Q+ T +++ + S G I S K + DK T + GYGFV++ A AV
Sbjct: 85 TNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQSLGYGFVNYVRQEDAYKAVT 144
Query: 119 A-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+ LQ+K I AR + NLY++ L + DLE+L + ++++RIL
Sbjct: 145 SLNGLRLQNKTIKVSFARPSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILS 204
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + K + + I NG G EP+ VKFA+S
Sbjct: 205 DNVTGISKGVGFVRFDRKSEAEDAIDKLNGKIPAGCTEPITVKFANS 251
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 22/183 (12%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN--------------KCRGY 102
SKTNL + L Q T +++ ++ S G + S K I DK T + GY
Sbjct: 28 SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTGMKLPGVITSPLLTGQSLGY 87
Query: 103 GFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLE 155
GFV++ A A+ L Q+K I AR + NLY++ LP N + DLE
Sbjct: 88 GFVNYHRPEDAEKAINTLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKNMTQQDLE 147
Query: 156 SLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
SL + Y ++++RIL DN SKGVGF R + + + ++ IQ NG+ GS EP+ VKF
Sbjct: 148 SLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRLEAERAIQELNGTIPKGSTEPITVKF 207
Query: 215 ADS 217
A++
Sbjct: 208 ANN 210
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL ++ T +DL ++ S YG II+++ + D T +G GF+ F+
Sbjct: 125 EAIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQ---R 181
Query: 114 LAAVKALQD 122
L A +A+Q+
Sbjct: 182 LEAERAIQE 190
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 271 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 330
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 37 TTNNVQH------NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
T NN H N S +G + SKTNL + L Q T ++L ++ G I S K
Sbjct: 10 TCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKL 69
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIA 143
+ DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 70 VRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVS 129
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGST 202
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 130 GLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQK 189
Query: 203 LPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPA 262
P + EP+ VKFA++ +K A +Y P R + A + P P
Sbjct: 190 PPAATEPITVKFANNPSQKTNQ-AILSQLYHSPN---RRYPAPLAQQAQRFRFP----PM 241
Query: 263 TIQYQRFTAGPGGTGHIPAGYTPWV 287
TI AG GH G+ +V
Sbjct: 242 TIDGMTSLAGINIPGHAGTGWCIFV 266
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 264 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 323
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-- 96
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVL 65
Query: 97 -------------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP- 137
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 PASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 125
Query: 138 -TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMI 195
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ ++ I
Sbjct: 126 GANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 185
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
Q NG T G EP+ VKFA++
Sbjct: 186 QELNGKTPKGYAEPITVKFANN 207
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 272 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 331
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-- 96
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVL 65
Query: 97 -------------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP- 137
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 PASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 125
Query: 138 -TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMI 195
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ ++ I
Sbjct: 126 GANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 185
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
Q NG T G EP+ VKFA++
Sbjct: 186 QELNGKTPKGYAEPITVKFANN 207
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 272 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 331
>gi|70992281|ref|XP_750989.1| RNA binding protein MSSP-2 [Aspergillus fumigatus Af293]
gi|66848622|gb|EAL88951.1| RNA binding protein MSSP-2, putative [Aspergillus fumigatus Af293]
gi|159124558|gb|EDP49676.1| RNA binding protein MSSP-2, putative [Aspergillus fumigatus A1163]
Length = 624
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 13/173 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG TTD+ L + +++G I KAI+D T C+G+GFV +FES
Sbjct: 280 TNVYIRGFLPQTTDEMLHSYAARFGKIDRCKAIVDLDTGLCKGFGFVQFYNFESCENCIR 339
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y VVS +I
Sbjct: 340 GFFYLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNVPITWTEADLRHHFEPY-HVVSEKI 398
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR ++++ ++++ F+ + G K LL++FAD+ +K
Sbjct: 399 SRDEKTGVSKEVGFARFDTREIAEKVLGEFHNISKNGVK--LLLRFADTKAQK 449
>gi|238491126|ref|XP_002376800.1| polyadenylate-binding protein, putative [Aspergillus flavus
NRRL3357]
gi|317145771|ref|XP_001821057.2| polyadenylate-binding protein [Aspergillus oryzae RIB40]
gi|220697213|gb|EED53554.1| polyadenylate-binding protein, putative [Aspergillus flavus
NRRL3357]
Length = 470
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV +FES
Sbjct: 127 TNVYIRGFLPETTDEMLYAYASRFGKIDRCKAIVDLDTGLCKGFGFVQYYNFESCENCIR 186
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P ++ E DL Y VVS +I
Sbjct: 187 GFFYLGYQASFAQKSRNSRLKDLEDKTSTNIYCTNIPNDWTEADLRRHFEPY-RVVSEKI 245
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR E+++ ++++ ++ +T + LL++FAD+ +K
Sbjct: 246 SRDEKTGVSKEVGFARFETREIAEKVLTEYHNTTAKDGVK-LLLRFADTKAQK 297
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G I S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + + + +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEASMAIASL 305
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 44 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 103
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 104 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 163
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 164 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 211
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 128 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 187
Query: 114 LAAVKAL 120
A+ +
Sbjct: 188 EEAITSF 194
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 273 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 332
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPIAVKFA 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + + D+E + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) [Pan
troglodytes]
Length = 326
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 24/202 (11%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-- 96
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSTNGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVL 65
Query: 97 -------------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP- 137
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 PASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 125
Query: 138 -TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMI 195
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ ++ I
Sbjct: 126 GANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 185
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
Q NG T G EP+ VKFA++
Sbjct: 186 QELNGKTPKGYAEPITVKFANN 207
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 272 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 331
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFEPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
Query: 118 KA--LQDKGIHAQM 129
L DK + +
Sbjct: 306 NGYRLGDKILQVSL 319
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S +NL + L Q +D++ ++ Q G I + K + +K T G+GFVD+ A A
Sbjct: 14 SSSNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTGYSYGFGFVDYHDPEDAKKA 73
Query: 117 VKA-----LQDKGIHAQMAR---QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ + +K + +A+ TN+YI +P NF +LE+L + +V R
Sbjct: 74 IGVYNGFKMNNKTLKVAIAKPSNSNHSKNTNVYIRGVPKNFDPDELENLFGTFGRLVQFR 133
Query: 169 ILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLK 220
+LRD + N +KGV FA + K+ D+ IQ +G TL G EPL VK AD +K
Sbjct: 134 VLRDLSTNVNKGVAFALYDDKENADRAIQDMDGKTLNGGTEPLQVKIADDQMK 186
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ + +T D L+ + SQYG + + DK T K +GYGFV + AL A+ L
Sbjct: 271 LFVYNIGMETDDPSLVQLFSQYGTVEKAAVVRDKMTTKSKGYGFVTMPNYNEALWAIDQL 330
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 25 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 84
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + +++ +++
Sbjct: 85 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 144
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 145 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 194
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 256 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 315
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 39/189 (20%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKALQDKG------------------IHAQMARQQ--------------EQDPTN-- 139
A+ + +H Q R + P N
Sbjct: 161 EEAITSFNGHKPPGSSEPITVKFAANPNPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNAS 220
Query: 140 ----LYIANLPLNFKECDLESLLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQM 194
++I NL + E L + + V + +++RD N N KG GF + + ++
Sbjct: 221 SGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMA 280
Query: 195 IQLFNGSTL 203
I NG L
Sbjct: 281 IASLNGYRL 289
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
+ +N S +G + SKTNL + L Q+ T ++L ++ G I S K + DK T +
Sbjct: 21 ITNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 80
Query: 101 GYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECD 153
GYGFV++ A A+ LQ K I AR NLY++ LP + +
Sbjct: 81 GYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKE 140
Query: 154 LESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG P + EP+ V
Sbjct: 141 LEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPSATEPITV 200
Query: 213 KFADS 217
KFA++
Sbjct: 201 KFANN 205
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 23/200 (11%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT---- 96
V++ + G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 34 VKNGSANGSVDGSNDESRTNLIVIYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSVLPA 93
Query: 97 -----------NKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP--T 138
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 94 SLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGA 153
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ ++ IQ
Sbjct: 154 NLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQE 213
Query: 198 FNGSTLPGSKEPLLVKFADS 217
NG T G EP+ VKFA++
Sbjct: 214 LNGKTPKGYAEPITVKFANN 233
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 298 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 357
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 37 TTNNVQHNGSPGTP----TGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAI 91
TT N N S G P TGP SKTNL + L Q+ T ++ ++ G I S K +
Sbjct: 91 TTANGPSNNSRGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 150
Query: 92 LDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIAN 144
DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 151 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 210
Query: 145 LPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 211 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKP 270
Query: 204 PGSKEPLLVKFADSGLKK 221
G+ EP+ VKFA++ +K
Sbjct: 271 SGAAEPITVKFANNPSQK 288
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 358 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 417
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 143 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 202
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 203 NNPSQKTG 210
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 264 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 323
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 116/257 (45%), Gaps = 24/257 (9%)
Query: 44 NGSPGTPTGPE-QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGY 102
+GSP TG + SKTNL + L Q T ++ ++ S G + S K I DK T + GY
Sbjct: 7 SGSPDGRTGSSTKDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQSLGY 66
Query: 103 GFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLE 155
GFV++ A A+ LQ K I AR Q NLY++ LP + DLE
Sbjct: 67 GFVNYVKPQDAEKAINTLNGLRLQAKTIKVSYARPSSQAIKDANLYVSGLPKTMTQQDLE 126
Query: 156 SLLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + ++++RIL D S+GVGF R + + + ++ I NG G+ +P+ VKF
Sbjct: 127 GLFEAHGRIITSRILFDPVTGQSRGVGFVRFDQRVEAERAITELNGHIPKGATDPITVKF 186
Query: 215 ADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPG 274
A++ + A A Y P Y PM A +Y A P
Sbjct: 187 ANNPSQNH-AKALQQAAYLAPARR--------------YLGPMLHQTARFRYSPMGADPM 231
Query: 275 GTGHIPAGYTPWVPTQY 291
G G+IP G T + Y
Sbjct: 232 GVGNIPNGGTGFCIFVY 248
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT D L + +G + + K I D TNKC+G+GFV A+ A+ L
Sbjct: 245 IFVYNLAPDTEDSVLWQLFGPFGAVTNVKVIRDFQTNKCKGFGFVTMAHYDEAVVAIAQL 304
>gi|326477279|gb|EGE01289.1| RNA binding protein MSSP-2 [Trichophyton equinum CBS 127.97]
Length = 456
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES--------- 109
TN+YIRG +TTD+ L N S++G I KAI+D T C+G+GFV F S
Sbjct: 315 TNVYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ ++++ TN+Y N+P+++ E DL Y VVS +I
Sbjct: 375 GFFHLGYQASFAQKSRNSRLKDLEDKNSTNVYCTNVPIDWAEADLRRHFEPY-QVVSEKI 433
Query: 170 LRDNNN-TSKGVGFARLESKDKC 191
RD SK VGFAR E+++ C
Sbjct: 434 SRDEKTGVSKEVGFARFETREIC 456
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN--NVQHNGSPGTPTGPEQLSKTNLYIRGLT 67
S A P ++ T NG T T N N + SP E SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINCSSPVESNNTED-SKTNLIVNYLP 74
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQD 122
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 75 QNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT 134
Query: 123 KGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKG 179
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+G
Sbjct: 135 KTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRG 194
Query: 180 VGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
VGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 195 VGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 232
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 307 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 366
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 21 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 80
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 81 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 140
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 141 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 200
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 201 NNPSQKTG 208
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 282 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 341
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T + ++ G I S K + DK T + GYGFV++ A A
Sbjct: 324 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 383
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + ++E L ++Y ++++RI
Sbjct: 384 INTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 443
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K G
Sbjct: 444 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTG 498
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 566 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 625
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 37 TTNNVQH------NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
T NN H N S +G + SKTNL + L Q T ++L ++ G I S K
Sbjct: 18 TCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKL 77
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIA 143
+ DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 78 VRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVS 137
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGST 202
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 138 GLPKTMTQKELEQLFSQYGRIITSRILVDQVTGMSRGVGFIRFDKRIEAEEAIKGLNGQK 197
Query: 203 LPGSKEPLLVKFADS 217
P + EP+ VKFA++
Sbjct: 198 PPAATEPITVKFANN 212
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q T+K+L +M GP+ S + + D T G+GFV++ AL A+
Sbjct: 37 RTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTGYSYGFGFVNYTKAEDALTAI 96
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E +E + +K+ +V IL
Sbjct: 97 NTLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNIL 156
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ I +G+ G EPL VK A+ K++ A G
Sbjct: 157 KDKLTGLPRGVAFVRYDKREEAQDAINQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 215
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+K + + S++G I+ + DK T RG FV
Sbjct: 112 SFARPSG-EEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTGLPRGVAFV 170
Query: 106 DFESGGYALAAVKALQ 121
++ A A+ L
Sbjct: 171 RYDKREEAQDAINQLH 186
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 143 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 202
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 203 NNPSQKTG 210
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 277 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 336
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 143 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 202
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 203 NNPSQKTG 210
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G I S K
Sbjct: 42 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98
Query: 90 AILDKTTN-KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNLY 141
+ DK T + GYGFV++ A A+ L Q K I AR NLY
Sbjct: 99 LVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLY 158
Query: 142 IANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNG 200
++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 159 VSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 218
Query: 201 STLPGSKEPLLVKFADSGLKKRGAGA-----GGPN-IYRGPGAEVRLWGRDSADSQLAYE 254
PG+ EP+ VKFA++ +K PN Y GP A+ R +AY
Sbjct: 219 QKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYG 278
Query: 255 HPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWV 287
P TI AG GH G+ +V
Sbjct: 279 VKSRFSPMTIDGMTSLAGINIPGHPGTGWCIFV 311
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 309 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 368
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD++S +
Sbjct: 103 DRASATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKSEADS 162
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ L ++K + AR Q TNLY+ NLP N + L+ + + + +V
Sbjct: 163 EDAILKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNINDAMLDRIFSAFGQIVQ 222
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 223 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKTLNNTVPEGGSQPIWVRLAEEHGKAKAA 281
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++L ++ G I S K + DK T + GYGFV++ A A
Sbjct: 35 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 94
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 95 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 154
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 155 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 203
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of Hur
Complexed With Rna
Length = 177
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A A+
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 118 KA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
LQ K I AR + NLYI+ LP + D+E + +++ ++++R+L
Sbjct: 62 NTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL 121
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 122 VDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 167
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 84 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 143
Query: 114 LAAVKAL 120
A+ +
Sbjct: 144 EEAITSF 150
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 21 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 80
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 81 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 140
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 141 LFSQYGRIITSRILVDQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 200
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 201 NNPSQKTG 208
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 275 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 334
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 9/170 (5%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-NKCRGYGFVDFESGGYALA 115
SKTNL + L Q T +++ ++ S G + S K I DK T + GYGFV++ A
Sbjct: 25 SKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTAGQSLGYGFVNYHRPEDAEK 84
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ+K I AR NLY++ L + + DLE+L Y ++++R
Sbjct: 85 AINTFNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLSKSMTQQDLEALFQPYGQIITSR 144
Query: 169 ILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
IL DN SKGVGF R + + + ++ IQ NG+T G+ EP+ VKFA++
Sbjct: 145 ILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTTPKGASEPITVKFANN 194
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NLY+ GL++ T +DL + YG II+++ + D T +G GF+ F+ A A++
Sbjct: 115 NLYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQ 174
Query: 120 LQD---KGIHAQMARQQEQDPTN 139
L KG + + +P+N
Sbjct: 175 LNGTTPKGASEPITVKFANNPSN 197
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ AV++L
Sbjct: 258 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAVQSL 317
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 8/174 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL + L QD T+++L +M S GPI + + + D T G+GFV+F S A A++
Sbjct: 88 TNLIVNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTGYSYGFGFVNFLSEDAAQRAIR 147
Query: 119 AL-----QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
L ++K + AR Q D TNLYI NLP + L+ + KY T+V ILR
Sbjct: 148 CLNGYSVRNKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILR 207
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
D +GV F R +++ + I N G +PL+V+ A+ + + A
Sbjct: 208 DKLTGFPRGVAFVRFNKREEAQEAISALNNVIPQGGTQPLIVRVAEDHGRAKAA 261
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 30 NGGTHPITTN---NVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
NG T T+N + +N S +G + SKTNL + L Q+ T ++L ++ G I
Sbjct: 87 NGPTCNNTSNGPSTITNNCSSPVESGSVEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIE 146
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTN 139
S K + DK T + GYGFV++ A A+ LQ K I AR N
Sbjct: 147 SCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDAN 206
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+
Sbjct: 207 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEEAIKGL 266
Query: 199 NGSTLPGSKEPLLVKFADS 217
N PG+ EP+ VKFA++
Sbjct: 267 NCQKPPGATEPITVKFANN 285
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 359 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 418
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN---NVQHNGSPGTPTGPEQLSKTNLYIRGL 66
S A P ++ T NG T T+N + +N S +G + SKTNL + L
Sbjct: 16 SWAPEPWTGQVIAAMETQLSNGPTCNNTSNGPSTMSNNCSSPVESGSIEDSKTNLIVNYL 75
Query: 67 TQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQ 121
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 76 PQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTLNGLRLQ 135
Query: 122 DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSK 178
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+
Sbjct: 136 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 195
Query: 179 GVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
GVGF R + + + ++ I+ N PG+ EP+ VKFA++
Sbjct: 196 GVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANN 234
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 367
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 37 TTNNVQHNGSPGTP----TGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAI 91
TT N N S G P TGP SKTNL + L Q+ T ++ ++ G I S K +
Sbjct: 129 TTANGPTNNSRGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 188
Query: 92 LDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIAN 144
DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 189 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 248
Query: 145 LPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 249 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKP 308
Query: 204 PGSKEPLLVKFADSGLKK 221
G+ EP+ VKFA++ +K
Sbjct: 309 SGAAEPITVKFANNPSQK 326
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 395 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 454
>gi|255956651|ref|XP_002569078.1| Pc21g20920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590789|emb|CAP96989.1| Pc21g20920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 604
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 13/175 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L +++G I KAI+D T+ C+G+GFV FES
Sbjct: 275 TNVYIRGFLPETTDEMLHAYAARFGKIERCKAIVDLDTSLCKGFGFVQYYSFESCENCIR 334
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKY--VTVVST 167
G + L + K ++++ +++ TN+Y N+P+++ E ++ L + VVS
Sbjct: 335 GFFYLGYQASFAQKSRNSRLKDLEDKSSTNIYCTNIPIDWTEALVQDLRRHFEPWRVVSE 394
Query: 168 RILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+I RD SK VGFAR E+++ ++++ F+ T G LL++FAD+ +K
Sbjct: 395 KISRDEKTGVSKEVGFARFENREVAEKVLAEFHNVT-KGDGVKLLLRFADTKAQK 448
>gi|358366432|dbj|GAA83053.1| UV-damaged DNA binding protein [Aspergillus kawachii IFO 4308]
Length = 1643
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 14/174 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFES------ 109
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV +FES
Sbjct: 1309 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLDTGLCKGFGFVQYYNFESCENCIR 1368
Query: 110 GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
G + L + K ++++ +++ TN+Y N+P+ + E DL Y V+S +I
Sbjct: 1369 GFFYLGYQASFAQKSRNSRLKDLEDKSSTNIYCTNIPIEWTEADLRHHFEPY-HVISEKI 1427
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKK 221
RD SK VGFAR ES++ ++++ + N G K LL++FAD+ +K
Sbjct: 1428 SRDEKTGVSKEVGFARFESREIAEKVLSEYHNAVAKDGVK--LLLRFADTKAQK 1479
>gi|158298951|ref|XP_319085.4| AGAP009952-PA [Anopheles gambiae str. PEST]
gi|157014134|gb|EAA13895.5| AGAP009952-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 36/208 (17%)
Query: 40 NVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK----- 94
+ Q NG G ++ SKTNL + L Q T +++ ++ S G + S K I DK
Sbjct: 14 DAQQNG------GGQEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKPGCVT 67
Query: 95 -----------------TTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ 132
T + GYGFV+++ A A+ L Q+K I AR
Sbjct: 68 RHAHTHTYIHLFDGCYLLTGQSLGYGFVNYQRAEDASKAINTLNGLRLQNKQIKVSFARP 127
Query: 133 QEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKD 189
+ NLY++ LP N + DLE+L + Y ++++RIL DN SKGVGF R + +
Sbjct: 128 SSEAIKGANLYVSGLPKNMLQADLEALFSPYGRIITSRILCDNITGLSKGVGFIRFDQRM 187
Query: 190 KCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ ++ I+ NG+ GS EP+ VKFA++
Sbjct: 188 EAEKAIKELNGTVPKGSTEPITVKFANN 215
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 282 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 341
>gi|348504906|ref|XP_003440002.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 335
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 48 GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
G ++ ++TNL + L Q + +L ++ S G + S K I DK GYGFV+F
Sbjct: 20 GEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNF 79
Query: 108 ESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAK 160
+ A A+ L Q K I AR NLYI+ LP + D+E + +
Sbjct: 80 VNPSDAERAISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSH 139
Query: 161 YVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
Y ++++R+L D + S+GV F R + + + D ++ NG T PGS EP+ VKFA
Sbjct: 140 YGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFA 195
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 255 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 314
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 36 ITTNNVQHNGSPGT------PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
I+T Q N PG G SKTNL + L Q+ T ++ ++ G I S K
Sbjct: 5 ISTMETQANNGPGCVGILNGTNGEADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCK 64
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 65 LVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYV 124
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
++LP + ++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 125 SSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 184
Query: 202 TLPGSKEPLLVKFADSGLKKRG 223
G+ EP+ VKFA++ +K G
Sbjct: 185 KPLGASEPITVKFANNPSQKTG 206
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
PIT ++V N + + TGP + +++ L+ + + L + +G + + K I D
Sbjct: 243 PITIDSVT-NLAGVSLTGPTT-AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDF 300
Query: 95 TTNKCRGYGFVDFESGGYALAAVKAL 120
TTNKC+G+GFV + A A+ +L
Sbjct: 301 TTNKCKGFGFVTMTNYDEAAMAIASL 326
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 27/205 (13%)
Query: 40 NVQHNGSP-GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN- 97
++ NGS G+ G S+TNL + L Q T +++ ++ S G + S K + DK +
Sbjct: 6 DIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGN 65
Query: 98 -----------------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ 135
+ GYGFV++ A AV L Q+K I AR +
Sbjct: 66 LVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSE 125
Query: 136 DP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCD 192
NLY++ LP N + DLE + A + ++++RIL DN + SKGVGF R + +++ +
Sbjct: 126 SIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAE 185
Query: 193 QMIQLFNGSTLPGSKEPLLVKFADS 217
+ IQ NG T G EP+ VKFA++
Sbjct: 186 RAIQELNGKTPKGYAEPITVKFANN 210
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D T+KC+G+GFV + A+ A+++L
Sbjct: 275 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSL 334
>gi|348504908|ref|XP_003440003.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 361
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 48 GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
G ++ ++TNL + L Q + +L ++ S G + S K I DK GYGFV+F
Sbjct: 46 GEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNF 105
Query: 108 ESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAK 160
+ A A+ L Q K I AR NLYI+ LP + D+E + +
Sbjct: 106 VNPSDAERAISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQDVEDMFSH 165
Query: 161 YVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
Y ++++R+L D + S+GV F R + + + D ++ NG T PGS EP+ VKFA
Sbjct: 166 YGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPITVKFA 221
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 281 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 340
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 36 ITTNNVQHNGSPGT------PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
I+T Q N PG G SKTNL + L Q+ T ++ ++ G I S K
Sbjct: 5 ISTMETQANNGPGCVGILNGTNGEADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCK 64
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYI 142
+ DK T + GYGFV++ A A+ LQ K I AR NLY+
Sbjct: 65 LVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYV 124
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
++LP + ++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 125 SSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 184
Query: 202 TLPGSKEPLLVKFADSGLKKRG 223
G+ EP+ VKFA++ +K G
Sbjct: 185 KPLGASEPITVKFANNPSQKTG 206
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
PIT ++V N + + TGP +++ L+ + + L + +G + + K I D
Sbjct: 236 PITIDSVT-NLAGVSLTGPTTAGWC-IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDF 293
Query: 95 TTNKCRGYGFVDFESGGYALAAVKAL 120
TTNKC+G+GFV + A A+ +L
Sbjct: 294 TTNKCKGFGFVTMTNYDEAAMAIASL 319
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I A + NLYI+ LP + D+E + +++ +++
Sbjct: 75 ERAISTLNGLRLQSKTIKVSYAHPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 33 AKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERA 92
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP N + D+E + ++Y ++++R+
Sbjct: 93 ISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKNMTQKDVEDMFSRYGRIINSRV 152
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D +S+GV F R + + + ++ ++ NG PG+ EP+ VKFA
Sbjct: 153 LVDQGTGSSRGVAFIRFDKRAEAEEAVKNLNGQKPPGASEPITVKFA 199
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL ++ T KD+ +M S+YG II+++ ++D+ T RG F+ F+ A
Sbjct: 116 DTIKDANLYISGLPKNMTQKDVEDMFSRYGRIINSRVLVDQGTGSSRGVAFIRFDKRAEA 175
Query: 114 LAAVKAL 120
AVK L
Sbjct: 176 EEAVKNL 182
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 41 VQHNGSPGTPTGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
V H GS G + P S ++I L QD + L M +G + + K I D TNKC
Sbjct: 240 VDHMGSMGGVSVPGNSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRDFNTNKC 299
Query: 100 RGYGFV---DFESGGYALAAV 117
+G+GFV ++E A+A++
Sbjct: 300 KGFGFVTMTNYEEAAMAIASL 320
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 307 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 366
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 14/205 (6%)
Query: 33 THPITTNNVQHNGSPGT------PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
T I+T Q + PG+ G SKTNL + L Q+ T ++ ++ G I
Sbjct: 3 TQIISTMETQASNGPGSVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIE 62
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTN 139
S K + DK T + GYGFV++ A A+ LQ K I AR N
Sbjct: 63 SCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDAN 122
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+++LP + ++E L ++Y ++++RIL D S+GVGF R + + + ++ I+
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 182
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRG 223
NG G+ EP+ VKFA++ +K G
Sbjct: 183 NGQKPLGASEPITVKFANNPSQKTG 207
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
PIT ++V N + + TGP +++ L+ + + L + +G + + K I D
Sbjct: 237 PITIDSVT-NLAGVSLTGPTTAGWC-IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDF 294
Query: 95 TTNKCRGYGFVDFESGGYALAAVKAL 120
TTNKC+G+GFV + A A+ +L
Sbjct: 295 TTNKCKGFGFVTMTNYDEAAMAIASL 320
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN--NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKF
Sbjct: 143 LFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKF 202
Query: 215 ADSGLKKRG 223
A++ +K G
Sbjct: 203 ANNPSQKTG 211
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 33 THPITTNNVQHNGSPGT------PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
T I+T Q + PG+ G SKTNL + L Q+ T ++ ++ G I
Sbjct: 3 TQIISTMETQASNGPGSVGILNGTNGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIE 62
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTN 139
S K + DK T + GYGFV++ A A+ LQ K I AR N
Sbjct: 63 SCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDAN 122
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN--NNTSKGVGFARLESKDKCDQMIQL 197
LY+++LP + ++E L ++Y ++++RIL D + S+GVGF R + + + ++ I+
Sbjct: 123 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKG 182
Query: 198 FNGSTLPGSKEPLLVKFADSGLKKRG 223
NG G+ EP+ VKFA++ +K G
Sbjct: 183 LNGQKPLGASEPITVKFANNPSQKTG 208
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
PIT ++V N + + TGP +++ L+ + + L + +G + + K I D
Sbjct: 238 PITIDSVT-NLAGVSLTGPTTAGWC-IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDF 295
Query: 95 TTNKCRGYGFVDFESGGYALAAVKAL 120
TTNKC+G+GFV + A A+ +L
Sbjct: 296 TTNKCKGFGFVTMTNYDEAAMAIASL 321
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++ ++ S GPI S++ + D T GYGFV++ + A A
Sbjct: 77 SGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTDEGAQRA 136
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K+L ++K I AR +E TNLY+ NLP E L+ + KY +V I
Sbjct: 137 IKSLNGVTVRNKRIKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNI 196
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
LRD +GV F R +++ + I N GS +PL V+ A+ K++
Sbjct: 197 LRDKMTGKPRGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGKQKA 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
+T N + S P G E+L +TNLY+ L + T++ L + +YG I+ + DK
Sbjct: 143 VTVRNKRIKVSFARPAG-EELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKM 201
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T K RG F+ + A A+ AL +
Sbjct: 202 TGKPRGVAFIRYNKREEAQEAIAALNN 228
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 36 ITTNNVQHNGSP---GTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPI 85
I+T Q +G P P GP SKTNL + L Q+ T ++ ++ G I
Sbjct: 8 ISTMETQVSGGPPPTALPNGPLVSTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEI 67
Query: 86 ISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PT 138
S K + DK T + GYGFV++ A A+ LQ K I AR
Sbjct: 68 ESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDA 127
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
NLY++ LP + ++E L ++Y ++++RIL D S+GVGF R + + + ++ I+
Sbjct: 128 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKG 187
Query: 198 FNGSTLPGSKEPLLVKFADSGLKKRG 223
NG G+ EP+ VKFA++ +K G
Sbjct: 188 LNGQKPLGASEPITVKFANNPSQKTG 213
>gi|296414325|ref|XP_002836852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632693|emb|CAZ81043.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Query: 92 LDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQ---------EQDPTNLYI 142
+D C+GYGF +E+ A ++ L A AR+ + + TN+Y+
Sbjct: 1 MDTDHGTCKGYGFARYENTDEAEDCIRGLVSSKYEAGFARESFNARLKTLADPNSTNVYV 60
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGST 202
+NLP + E ++ + + Y TVVS RILRD S+GVGFAR E + CD++I+ F+G
Sbjct: 61 SNLPRSMNEKTMQDIFSGY-TVVSNRILRDPEGNSRGVGFARFEDRSICDEIIRNFHGKL 119
Query: 203 LPGSKEPLLVKFADSGLKKR 222
+ + PL V++AD+ +KR
Sbjct: 120 VGEEQIPLQVRYADTSAQKR 139
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 9/189 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN--NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L ++Y ++++RIL D S+GVGF R + +++ ++ I+ NG G+ EP+ VKF
Sbjct: 143 LFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKF 202
Query: 215 ADSGLKKRG 223
A++ +K G
Sbjct: 203 ANNPSQKTG 211
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|339246059|ref|XP_003374663.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972148|gb|EFV55839.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q T ++ + G + + K + DK T + GYGF+++ + A A+
Sbjct: 18 KTNLIVNYLPQSMTTEEFRMLFDSIGEVETAKLVRDKVTGQSLGYGFINYVNPESAAKAI 77
Query: 118 KALQDKGIHAQMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ L G+ ++ + P+ NLYI+ LP + +LE L + + ++++RIL
Sbjct: 78 ERLNGLGLQSKKMKVSYARPSSESIKGANLYISGLPDAYTVKELEELFSPFGRIITSRIL 137
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN SKGVGF R + K + D I N + PG EP++VKFA+S
Sbjct: 138 VDNATGISKGVGFVRYDKKGEADAAIAKLNSTIPPGGTEPIVVKFANS 185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL T K+L + S +G II+++ ++D T +G GFV ++ G A
Sbjct: 100 ESIKGANLYISGLPDAYTVKELEELFSPFGRIITSRILVDNATGISKGVGFVRYDKKGEA 159
Query: 114 LAAVKAL 120
AA+ L
Sbjct: 160 DAAIAKL 166
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
++++ L + + L + +G +++ K I D TNKC+GYGFV + ALAA+
Sbjct: 268 SIFVYNLAPEVEESKLWQLFGPFGAVLNVKVIRDMQTNKCKGYGFVTMTNYDEALAAISM 327
Query: 120 L 120
+
Sbjct: 328 I 328
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon pisum]
Length = 392
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 29 QNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIIST 88
NG H +TN+ + S G E SKTNL + L Q T +++ ++ S G + S
Sbjct: 11 HNGSIHTSSTNS---HASQGNSLNEE--SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESC 65
Query: 89 KAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLY 141
K I DK T + GYGFV++ A A+ LQ+K I AR + NLY
Sbjct: 66 KLIRDKVTGQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFARPSSEAIKGANLY 125
Query: 142 IANLPLNFKECDLESLLAKYVTVVSTRILRDN-----------NNTSKGVGFARLESKDK 190
++ LP + + DLE+L + Y ++++RIL DN + S VGF R + + +
Sbjct: 126 VSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGFIRFDQRIE 185
Query: 191 CDQMIQLFNGSTLPGSKEPLLVKFADS 217
++ IQ NG+ GS E + VKFA++
Sbjct: 186 AERAIQELNGTVPKGSTESITVKFANN 212
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 296 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 355
>gi|302506481|ref|XP_003015197.1| meiotic RNA-binding protein 1 [Arthroderma benhamiae CBS 112371]
gi|291178769|gb|EFE34557.1| meiotic RNA-binding protein 1 [Arthroderma benhamiae CBS 112371]
Length = 544
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 31/192 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGY---------------- 102
TN+YIRG +TTD+ L N S++G I KAI+D T C+GY
Sbjct: 273 TNVYIRGFLPETTDEMLQNYASRFGKIDRCKAIIDLETGLCKGYSLISFVSVTHLLIVIR 332
Query: 103 -GFVDFES---------GGYALAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKEC 152
GFV F S G + L + K ++++ ++++ TN+Y N+P+++ E
Sbjct: 333 FGFVQFFSFDACENCIRGFFHLGYQASFAQKSRNSRLKDLEDKNSTNVYCTNVPIDWAEA 392
Query: 153 DLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPL 210
DL Y VVS +I RD SK VGFAR E+++ ++++Q F N G K L
Sbjct: 393 DLRRHFEPY-QVVSEKISRDEKTGVSKEVGFARFETREIAEKVVQQFHNVVGKDGVK--L 449
Query: 211 LVKFADSGLKKR 222
L++FAD+ +K+
Sbjct: 450 LLRFADTKAQKQ 461
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 13/217 (5%)
Query: 16 ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDL 75
AN S+ T NG T +N+ NG + G SKTNL + L Q+ T ++
Sbjct: 26 ANEQIISTMETQVSNGPT----SNSSLPNGPLISANGATDDSKTNLIVNYLPQNMTQEEF 81
Query: 76 INMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMA 130
++ G I S K + DK T + GYGFV++ A A+ LQ K I A
Sbjct: 82 KSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDSNDADKAINTLNGLKLQTKTIKVSYA 141
Query: 131 RQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN--NNTSKGVGFARLE 186
R NLY++ LP + ++E L ++Y ++++RIL D S+GVGF R +
Sbjct: 142 RPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTAGVSRGVGFIRFD 201
Query: 187 SKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
+ + ++ I+ NG G+ EP+ VKFA++ +K G
Sbjct: 202 KRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTG 238
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 305 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 364
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGF+++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFLNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDTFSRFWRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+ NL I L T+ DL + +G I + K + D+ T+K GYGFV+FE+ A A+
Sbjct: 83 RNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAI 142
Query: 118 KAL-----QDKGIHAQMARQQEQDPT--NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+A+ +K + +AR T NLYI NLP E L ++ + ++S R+L
Sbjct: 143 QAMNGRQYMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARLL 202
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPN 230
D + KG+ F R + + ++ + N + +P+ VKFAD+ + R
Sbjct: 203 YD-GDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVKFADTNRRSRAPSGSSAG 261
Query: 231 IYRG 234
+++G
Sbjct: 262 MHQG 265
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon pisum]
Length = 383
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 29 QNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIIST 88
NG H +TN+ + S G E SKTNL + L Q T +++ ++ S G + S
Sbjct: 11 HNGSIHTSSTNS---HASQGNSLNEE--SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESC 65
Query: 89 KAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLY 141
K I DK T + GYGFV++ A A+ LQ+K I AR + NLY
Sbjct: 66 KLIRDKVTGQSLGYGFVNYHRPEDAEKAINTLNGLRLQNKTIKVSFARPSSEAIKGANLY 125
Query: 142 IANLPLNFKECDLESLLAKYVTVVSTRILRDN-----------NNTSKGVGFARLESKDK 190
++ LP + + DLE+L + Y ++++RIL DN + S VGF R + + +
Sbjct: 126 VSGLPKHMTQQDLENLFSPYGRIITSRILCDNMTVRQFVGNTGGDHSPCVGFIRFDQRIE 185
Query: 191 CDQMIQLFNGSTLPGSKEPLLVKFADS 217
++ IQ NG+ GS E + VKFA++
Sbjct: 186 AERAIQELNGTVPKGSTESITVKFANN 212
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 287 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 346
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILD-KTTNKCRGYGFVDFESGGYALAAV 117
TNL + L QD T++++ +M S GPI S + + D K T G+GFV++ + A A+
Sbjct: 104 TNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAI 163
Query: 118 KA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
K L++K + AR Q D TNLYI NLP E L+ + KY T+V IL
Sbjct: 164 KCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNIL 223
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
RD +GV F R +++ + I N G +PL+V+ A+ + + A
Sbjct: 224 RDKLTGQPRGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVAEDHGRAKAA 278
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNLYI L + T++ L + +YG I+ + DK T + RG FV F A
Sbjct: 186 DDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKREEA 245
Query: 114 LAAVKALQD 122
A+ AL +
Sbjct: 246 QEAISALNN 254
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I +AR + NLYI+ LP + D+E + + +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSVARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGRIIN 134
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG + G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYG
Sbjct: 23 NGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYG 82
Query: 104 FVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLES 156
FV++ A A+ LQ K I AR NLY++ LP + D+E
Sbjct: 83 FVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKDMEQ 142
Query: 157 LLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L ++Y ++++RIL + S+GVGF R + +++ ++ I+ NG G+ EP+ VKFA
Sbjct: 143 LFSQYGRIITSRILVNQVTGISRGVGFIRFDKRNEAEEAIKGLNGQKPLGAAEPITVKFA 202
Query: 216 DSGLKKRG 223
++ +K G
Sbjct: 203 NNPSQKTG 210
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 264 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 323
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 171 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 230
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 231 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 290
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 291 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 350
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 351 VKFANNPSQKTG 362
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 430 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 489
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILD-KTTNKCRGYGFVDFESGGYALAAV 117
TNL + L QD T++++ +M S GPI S + + D K T G+GFV++ + A A+
Sbjct: 82 TNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAI 141
Query: 118 KA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
K L++K + AR Q D TNLYI NLP E L+ + KY T+V IL
Sbjct: 142 KCLNGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNIL 201
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
RD +GV F R +++ + I N G +PL+V+ A+ + + A
Sbjct: 202 RDKLTGQPRGVAFVRFNKREEAQEAISALNNVIPQGGNQPLIVRVAEDHGRAKAA 256
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNLYI L + T++ L + +YG I+ + DK T + RG FV F A
Sbjct: 164 DDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFNKREEA 223
Query: 114 LAAVKALQD 122
A+ AL +
Sbjct: 224 QEAISALNN 232
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +TNL + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A
Sbjct: 17 IGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAER 76
Query: 116 AVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
A+ LQ K I AR + NLYI+ LP + D+E + +++ ++++R
Sbjct: 77 AISTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSR 136
Query: 169 ILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+L D S+GV F R + + + ++ I F G PGS EP+ VKFA
Sbjct: 137 VLVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFA 184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 101 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 160
Query: 114 LAAVKAL 120
A+ +
Sbjct: 161 EEAITSF 167
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL L Q+ T ++L + S G + S K I DK GYGFV++ + A A+
Sbjct: 1 RTNLIENYLPQNMTQEELQGVLSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 60
Query: 118 KAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q K I AR + NLYI+ LP + D+E + +++ ++++R+L
Sbjct: 61 STLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL 120
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 121 VDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 166
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 83 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 142
Query: 114 LAAVKAL 120
A+ +
Sbjct: 143 EEAITSF 149
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 228 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 287
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q T +L ++ S G + S K I DK GYGFV+F + A A
Sbjct: 50 AQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAERA 109
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + DLE + A + ++++R+
Sbjct: 110 ISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRV 169
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D + S+GV F R + + + + ++ NG T PG EP+ VKFA
Sbjct: 170 LVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFA 216
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I LTQD + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 276 IFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSL 335
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + +DL +M + +G II+++ ++D+ + RG F+ F+ A
Sbjct: 133 DTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEA 192
Query: 114 LAAVKAL 120
AVK L
Sbjct: 193 EDAVKHL 199
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + + +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIIN 134
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
+++ L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q T ++ N+ + G I S K + D++T + GYGFV++ A AV
Sbjct: 184 KTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQAV 243
Query: 118 KALQD-----KGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L K I AR NLY++ LP N + DLE L + + ++++RIL
Sbjct: 244 CLLNRLQCPPKTIKVSFARPSSSSIRDANLYVSGLPRNMMQKDLEQLFSPFGRIITSRIL 303
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D + S+GVGF + K + ++ I+ NG G++ PL+VKFA
Sbjct: 304 IDRVSGASRGVGFILFDKKSEAEEAIKALNGQKPCGNRVPLIVKFA 349
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + K I D TNKC+ +GFV S A AV +L
Sbjct: 441 IFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAVASL 500
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ + +L ++ G I S K + DK T + GYGFV++ G A A
Sbjct: 48 SKTNLIVNYLPQNMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADKA 107
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + ++E L ++Y ++++RI
Sbjct: 108 ISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKAMGQKEMEQLFSQYGRIITSRI 167
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
L D S+GVGF R + + + ++ ++ +G G+ EP+ VKFA+S G AGG
Sbjct: 168 LVDQVTGISRGVGFIRFDKRVEAEEAVRGLHGQKPLGATEPITVKFANS----PGHKAGG 223
Query: 229 PNIYRGPGAE 238
+ PGA
Sbjct: 224 ALLSLCPGAR 233
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 67 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 126
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 127 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 186
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 187 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 246
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 247 VKFANNPSQKTG 258
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 326 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 385
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q+ +K+L ++ GP+ S + + D T G+GFV++ A A+
Sbjct: 28 RTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAI 87
Query: 118 KAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L Q+K + AR +E TNLY+ NLP N E ++ + +KY +V IL
Sbjct: 88 STLNGLQVQNKRLKVSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNIL 147
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
+D +GV F R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 148 KDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 206
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+ + + S+YG I+ + DK T RG FV
Sbjct: 103 SFARPSG-EEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFV 161
Query: 106 DFESGGYALAAVKAL 120
F+ A A+ L
Sbjct: 162 RFDKREEAQEAIARL 176
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 68 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 127
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 128 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 187
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 188 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 247
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 248 VKFANNPSQKTG 259
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 327 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 386
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs Of
Human Antigen R
Length = 177
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A A+
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAI 61
Query: 118 KA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
LQ K I AR + NLYI+ LP + D+E + +++ ++++R+L
Sbjct: 62 NTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVL 121
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D S+GV F R + + + ++ I FNG PGS EP+ V FA
Sbjct: 122 VDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVXFA 167
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 84 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 143
Query: 114 LAAVKAL 120
A+ +
Sbjct: 144 EEAITSF 150
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + + D+ + +++ +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVVDMFSRFGRIIN 134
Query: 167 TRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein ElrA-B;
Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + +TNL + L Q+ T +L ++ S G + S K I DK GYGFV++ + A
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDA 74
Query: 114 LAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ LQ K I AR + NLYI+ LP + D+E + + +++
Sbjct: 75 ERAINTLNGLRLQSKTIKVSFARPSSETIKDANLYISGLPRTMTQKDVEDMFLPFGHIIN 134
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+R+L D S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 135 SRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFA 184
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 385 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 444
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 445 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 504
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 505 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 557
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 626 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 685
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 30/250 (12%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E++ ++NL + L Q T ++ ++ S G +IS K + DK ++ GY FV +E A
Sbjct: 3 EKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADA 62
Query: 114 LAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ +L Q K I AR NLY++ LPL++ DL++L +Y +++
Sbjct: 63 NKAISSLNGLRLQSKVIKVSYARPSSAAIKNANLYVSGLPLHYTHQDLDNLFGQYGAIIT 122
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA 226
+++L D N S+GVGF R + +++ + I N + G + L VKFA++ +K +
Sbjct: 123 SKVLYDGNGVSRGVGFVRYDKRNEAEAAILALNKTLPNGFQAQLTVKFANTPNQKSQSSE 182
Query: 227 GGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTP- 285
D D Q +Y PM ++++Y P PA
Sbjct: 183 NS----------------DYTDIQQSYGGPMRHQSSSVRY-----SPMAANDSPANSNSN 221
Query: 286 -WVPTQYVMP 294
W Y +P
Sbjct: 222 NWCIFIYNLP 231
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L QD D L + + YG I + K I + + KC+GYGFV+ + A A+ L
Sbjct: 225 IFIYNLPQDAEDSLLYQLFAPYGAINNVKLIRELNSKKCKGYGFVNMVNYEEAYNAILHL 284
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++ ++ S GPI S++ + D T GYGFV++ + A A
Sbjct: 76 SGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRA 135
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K+L ++K + AR +E TNLY+ NLP E L+ + KY +V I
Sbjct: 136 IKSLNGVTVRNKRLKVSFARPAGEEIKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNI 195
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
LRD +GV F R +++ + I N GS +PL V+ A+ K++
Sbjct: 196 LRDKMTGKPRGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGKQKA 250
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
+T N + S P G E++ +TNLY+ L + T++ L + +YG I+ + DK
Sbjct: 142 VTVRNKRLKVSFARPAG-EEIKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKM 200
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T K RG F+ + A A+ AL +
Sbjct: 201 TGKPRGVAFIRYNKREEAQEAIAALNN 227
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T + ++ G I S K + DK T + GYGFV++ A A
Sbjct: 28 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 87
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + ++E L ++Y ++++RI
Sbjct: 88 INTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 147
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
L D S+GVGF R + + + ++ I+ NG G++EP+ VKFA++ +K G
Sbjct: 148 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAREPITVKFANNPSQKTG 202
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + L + +G + + K I D TTNKC+G+GF+ + A A+ +L
Sbjct: 269 IFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFMTMTNYDEAAMAIASL 328
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q T +L ++ S G + S K I DK GYGFV+F + A A
Sbjct: 29 AQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAERA 88
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + DLE + A + ++++R+
Sbjct: 89 ISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRV 148
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D + S+GV F R + + + + ++ NG T PG EP+ VKFA
Sbjct: 149 LVDQASGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFA 195
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I LTQD + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 255 IFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSL 314
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + +DL +M + +G II+++ ++D+ + RG F+ F+ A
Sbjct: 112 DTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASGLSRGVAFIRFDKRSEA 171
Query: 114 LAAVKAL 120
AVK L
Sbjct: 172 EDAVKHL 178
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L Q + +L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 34 AKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLTPSDAERA 93
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + D+E + A+Y ++++R+
Sbjct: 94 INTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRV 153
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D + S+GV F R + + + + I+ NG PGS EP+ VKFA S
Sbjct: 154 LVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGSAEPITVKFAAS 202
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + T KD+ +M ++YG II+++ ++D+ + RG F+ F+ A
Sbjct: 117 DTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGLSRGVAFIRFDKRAEA 176
Query: 114 LAAVKAL 120
A+K L
Sbjct: 177 EDAIKDL 183
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+ ++
Sbjct: 262 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIGSL 321
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGY 102
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+ + GY
Sbjct: 134 QNGSNGSSE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGY 188
Query: 103 GFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLE 155
GFV++ A AV LQ+K I AR NLY++ LP + +LE
Sbjct: 189 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 248
Query: 156 SLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG+T +P++VK
Sbjct: 249 AIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVK 308
Query: 214 FADS 217
F+++
Sbjct: 309 FSNT 312
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 387 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 446
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 17 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 76
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 77 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 136
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 137 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 196
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 197 VKFANNPSQKTG 208
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 288 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 347
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 90/184 (48%), Gaps = 8/184 (4%)
Query: 53 PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ES 109
P+ S TNL I L Q TDK L M +Q G I + + + D T G+GFV+F E
Sbjct: 3 PQDTSMTNLIINYLPQSMTDKKLHQMFTQIGQIEACRVMKDVKTGYSFGFGFVNFVRPED 62
Query: 110 GGYALAAVKALQ--DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVV 165
A+ + LQ +K + AR +D TNLY+ NLP + E +LE L A Y +V
Sbjct: 63 ASKAIEVMNGLQVENKRLKVSYARPAGEDIKDTNLYVQNLPRSITERELEDLFAPYGQIV 122
Query: 166 STRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
IL+D + +GV F R K+ + I NG L G E L VK A+ K++ A
Sbjct: 123 QKNILKDKYSGLPRGVAFVRYNKKEDAQKAIIQLNGVLLEGCTEHLSVKIAEEHGKQKAA 182
Query: 225 GAGG 228
G
Sbjct: 183 YLAG 186
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGY 102
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+ + GY
Sbjct: 134 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQGQSLGY 188
Query: 103 GFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLE 155
GFV++ A AV LQ+K I AR NLY++ LP + +LE
Sbjct: 189 GFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELE 248
Query: 156 SLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG+T +P++VK
Sbjct: 249 AIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVK 308
Query: 214 FADS 217
F+++
Sbjct: 309 FSNT 312
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 387 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 446
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 8/171 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV- 117
TNL + L Q +D+D + + GP+ S K + DK TN G+GFVD+ + A A+
Sbjct: 191 TNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSYGFGFVDYVNEEDAERAIH 250
Query: 118 ----KALQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+ + K I AR+ + + N+YIAN+P +F E +L + ++ ++ R+LR
Sbjct: 251 EMNGQKMDHKTIKVSYARKNDSESKGANIYIANIPRSFGEEELGAHFRQFGEIIQVRLLR 310
Query: 172 DNN-NTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
D + N SKGVGF + + ++ NG TL L +KFAD +K
Sbjct: 311 DKSTNESKGVGFVYYTKRSEAAAALEAMNGKTLLKGYPALSIKFADINARK 361
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 125 IHAQMARQQEQDP-TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGF 182
H + R+ DP TNL + LP + D + L K + S +I+RD N S G GF
Sbjct: 177 FHHGLKRRNMSDPNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKATNYSYGFGF 236
Query: 183 ARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIY 232
+++ ++ I NG + + + V +A +K + + G NIY
Sbjct: 237 VDYVNEEDAERAIHEMNGQKM--DHKTIKVSYA----RKNDSESKGANIY 280
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L++ + D +K L + + G + I+D N+C+GYGFV + A A+ AL
Sbjct: 427 LFVYNIGYDAEEKTLWQLFAPLGTVTKVNVIMDHVRNQCKGYGFVTMKHLHEAEGAILAL 486
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 23 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 82
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 83 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 142
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 143 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 202
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 203 VKFANNPSQKTG 214
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 269 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 328
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
+NN ++ SP SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 25 SNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84
Query: 98 KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFK 150
+ GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMT 144
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP
Sbjct: 145 QKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEP 204
Query: 210 LLVKFADSGLKK 221
+ VKFA++ +K
Sbjct: 205 ITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla gorilla]
Length = 346
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 3 MQLYHRVSNATSP--ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTN 60
M+L +++ + P +N +S++SN S N P SP SKTN
Sbjct: 1 MRLQNQIISTMEPQVSNGPTSNTSNGPSSNNRNCP----------SPMQTGAATDDSKTN 50
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA- 119
L + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A+
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 120 ----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
LQ K I AR NLY++ LP + +LE L ++Y ++++RIL D
Sbjct: 111 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQ 170
Query: 174 -NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 171 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 215
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 275 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 334
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 97 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 156
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 157 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 209
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351
>gi|346320746|gb|EGX90346.1| RNA binding protein MSSP-2 [Cordyceps militaris CM01]
Length = 951
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+YIRGL T D+ L + S++G + ++KAI+D T C+G+GF F + + ++
Sbjct: 668 NVYIRGLHPTTDDELLFHFASRFGGVETSKAIIDTGTGACKGFGFAKFFTCEDSEMCIRG 727
Query: 120 LQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
G AR+ ++ TNLYI+NLP E +L ++ Y T++S++IL
Sbjct: 728 FHKLGYEVGFARESFNSRLKAEGDEGSTNLYISNLPKTLTEVELGTIFLGY-TILSSKIL 786
Query: 171 RDNNNTSKGVGFAR 184
RD+ S+GVGFAR
Sbjct: 787 RDSMGNSRGVGFAR 800
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 292 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 351
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 258 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 317
>gi|195570612|ref|XP_002103301.1| GD19030 [Drosophila simulans]
gi|194199228|gb|EDX12804.1| GD19030 [Drosophila simulans]
Length = 244
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+ PE +KTNL + L QD T+ +L + S+YG I K I + T YGFVDF S
Sbjct: 32 PSRPEVRNKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFVS 91
Query: 110 GGYALAAVKAL-----QDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
A AAV L + K + AR E + TNLY+ANLP E + L A Y +
Sbjct: 92 ERQAAAAVYNLNGYETRGKRLKVAFARPTEYENTNLYVANLPTYMDEKKIRELFAPYGKL 151
Query: 165 VSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG 218
+ +LR NN +GV F E ++ + + G+ +PL VKF +
Sbjct: 152 LDVTLLRHRFNNKFRGVAFLDFELARDAEEAKYGMDRYMIKGAFKPLKVKFVERA 206
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|444525484|gb|ELV14031.1| ELAV-like protein 3 [Tupaia chinensis]
Length = 332
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 271 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 330
Query: 121 Q 121
Sbjct: 331 H 331
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 17 NTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQ-LSKTNLYIRGLTQDTTDKDL 75
N S S GS I+TN+V S G G Q + TNL + L QD TD++L
Sbjct: 45 NDFSGGGSAMGSMCNMAPAISTNSVN---SGGGDCGDNQGCNGTNLIVNYLPQDMTDREL 101
Query: 76 INMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMA 130
+ GPI + + + D T GY FVDF S A A+K+L ++K + A
Sbjct: 102 YALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYA 161
Query: 131 R--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLES 187
R + TNLY+ NLP + +LE + KY +V ILRD +GV F R
Sbjct: 162 RPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNK 221
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
+++ + I N G+ +PL V+ A+
Sbjct: 222 REEAQEAISALNNVIPEGASQPLTVRLAE 250
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 3 MQLYHRVSNATSP--ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTN 60
M+L +++ + P +N +S++SN S N P SP SKTN
Sbjct: 1 MRLKNQIISTMEPQVSNGPTSNTSNGPSSNNRNCP----------SPMQTGATTDDSKTN 50
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA- 119
L + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A+
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 120 ----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
LQ K I AR NLY++ LP + +LE L ++Y ++++RIL D
Sbjct: 111 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQ 170
Query: 174 -NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 171 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 215
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 275 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 334
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 41 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 100
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 101 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 160
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 161 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 213
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 296 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 355
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 221
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 37 TTNNVQHNG----SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
TTN NG SP SKTNL + L Q+ T ++ ++ G I S K +
Sbjct: 13 TTNGPSSNGRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVR 72
Query: 93 DKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANL 145
DK T + GYGFV++ A A+ LQ K I AR NLY++ L
Sbjct: 73 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 132
Query: 146 PLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLP 204
P + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 133 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPS 192
Query: 205 GSKEPLLVKFADS 217
G+ EP+ VKFA++
Sbjct: 193 GATEPITVKFANN 205
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 221
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla gorilla]
Length = 366
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 221
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQK 216
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV +++ A+A++
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363
Query: 118 KA--LQDKGIHAQMARQQE 134
L D+ + M E
Sbjct: 364 NGYRLGDRVLQVSMTNYDE 382
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 41 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 100
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 101 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 160
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 161 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 209
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 269 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 328
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 97 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 156
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 157 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 205
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 265 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 324
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 17 NTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
N S S GS I+TN+V G G + + TNL + L QD TD++L
Sbjct: 62 NDFSGGGSAMGSMCNMAPAISTNSVNSGG--GDCGDTQGCNGTNLIVNYLPQDMTDRELY 119
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR 131
+ GPI + + + D T GY FVDF S A A+K+L ++K + AR
Sbjct: 120 ALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYAR 179
Query: 132 --QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESK 188
+ TNLY+ NLP + +LE + KY +V ILRD +GV F R +
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKR 239
Query: 189 DKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
++ + I N G+ +PL V+ A+
Sbjct: 240 EEAQEAISALNNVIPEGASQPLTVRLAE 267
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 97 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 156
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 157 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 205
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 325
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 271 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 330
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
+NN ++ SP SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 30 SNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89
Query: 98 KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFK 150
+ GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMT 149
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP
Sbjct: 150 QKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEP 209
Query: 210 LLVKFADS 217
+ VKFA++
Sbjct: 210 ITVKFANN 217
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 271 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 330
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 3 MQLYHRVSNATSP--ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTN 60
M+L +++ + P +N +S++SN S N P SP SKTN
Sbjct: 1 MRLKNQIISTMEPQVSNGPTSNTSNGPSSNNRNCP----------SPMQTGATTDDSKTN 50
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA- 119
L + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A+
Sbjct: 51 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 110
Query: 120 ----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
LQ K I AR NLY++ LP + +LE L ++Y ++++RIL D
Sbjct: 111 NGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQ 170
Query: 174 -NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 171 VTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 215
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 288 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 347
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 12 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 71
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 72 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 131
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 132 EMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 191
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 192 VKFANNPSQKTG 203
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 271 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 330
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++ + S GPI S++ + D T GYGFV++ + A A
Sbjct: 71 SGTNLIVNYLPQDMTDREFYALFSTSGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRA 130
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K+L ++K + AR +E TNLY+ NLP E L+ + KY +V I
Sbjct: 131 IKSLNGVTVRNKRLKVSFARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNI 190
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
LRD +GV F R +++ + I N GS +PL V+ A+ K++
Sbjct: 191 LRDKMTGKPRGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGKQKA 245
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
+T N + S P G E+L +TNLY+ L + T++ L + +YG I+ + DK
Sbjct: 137 VTVRNKRLKVSFARPAG-EELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKM 195
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T K RG F+ + A A+ AL +
Sbjct: 196 TGKPRGVAFIRYNKREEAQEAIAALNN 222
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
+NN ++ SP SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 25 SNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84
Query: 98 KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFK 150
+ GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMT 144
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP
Sbjct: 145 QKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEP 204
Query: 210 LLVKFADS 217
+ VKFA++
Sbjct: 205 ITVKFANN 212
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPSGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
L + L Q+ T ++L ++ S G + S K I DK GYGFV++ + A A+ L
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 60
Query: 121 -----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN 173
Q K I AR + NLYI+ LP + D+E + +++ ++++R+L D
Sbjct: 61 NGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQ 120
Query: 174 NN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
S+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 121 TTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 163
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 80 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 139
Query: 114 LAAVKAL 120
A+ +
Sbjct: 140 EEAITSF 146
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 225 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 284
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
+NN ++ SP SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 25 SNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84
Query: 98 KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFK 150
+ GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMT 144
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP
Sbjct: 145 QKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEP 204
Query: 210 LLVKFADS 217
+ VKFA++
Sbjct: 205 ITVKFANN 212
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 17 NTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLI 76
N S S GS I+TN+V G G + + TNL + L QD TD++L
Sbjct: 62 NDFSGGGSAMGSMCNMAPAISTNSVNSGG--GDCGDTQGCNGTNLIVNYLPQDMTDRELY 119
Query: 77 NMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR 131
+ GPI + + + D T GY FVDF S A A+K+L ++K + AR
Sbjct: 120 ALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYAR 179
Query: 132 --QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESK 188
+ TNLY+ NLP + +LE + KY +V ILRD +GV F R +
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKR 239
Query: 189 DKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
++ + I N G+ +PL V+ A+
Sbjct: 240 EEAQEAISALNNVIPEGASQPLTVRLAE 267
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 38 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 97
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 98 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 157
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 158 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANN 206
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 37 TTNNVQHNG----SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAIL 92
TTN NG SP SKTNL + L Q+ T ++ ++ G I S K +
Sbjct: 20 TTNGPSSNGRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVR 79
Query: 93 DKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANL 145
DK T + GYGFV++ A A+ LQ K I AR NLY++ L
Sbjct: 80 DKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 139
Query: 146 PLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLP 204
P + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 140 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPS 199
Query: 205 GSKEPLLVKFADS 217
G+ EP+ VKFA++
Sbjct: 200 GATEPITVKFANN 212
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 19 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 78
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 79 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 138
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 139 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 198
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 199 VKFANNPSQKTG 210
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 43 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 102
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 103 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 162
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 163 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 211
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 284 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 343
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 23 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 82
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 83 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 142
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 143 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 202
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 203 VKFANNPSQKTG 214
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 42 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 101
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 102 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 161
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 162 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 210
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 283 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 342
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 47 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 106
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 107 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 166
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 167 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 215
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 288 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 347
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 344
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD+++ +
Sbjct: 108 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 167
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 168 EDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQ 227
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 228 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 286
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN--NVQHNGSPGTPTGPEQLSKTNLYIRGLT 67
S A P ++ T NG T T N N + SP E SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINCSSPVESNNTED-SKTNLIVNYLP 74
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAVKA-----LQ 121
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ LQ
Sbjct: 75 QNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTVNGLRLQ 134
Query: 122 DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSK 178
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+
Sbjct: 135 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 194
Query: 179 GVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
GVGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 195 GVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 233
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
SP G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV
Sbjct: 62 SPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFV 121
Query: 106 DFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLL 158
++ A A+ LQ K I AR NLY++ LP + +LE L
Sbjct: 122 NYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF 181
Query: 159 AKYVTVVSTRILRDN----NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+ VKF
Sbjct: 182 SQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKF 241
Query: 215 ADS 217
A++
Sbjct: 242 ANN 244
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 317 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 376
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 13/194 (6%)
Query: 37 TTNNVQHNGSPGTP----TGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAI 91
TT N S G P TGP SKTNL + L Q+ T ++ ++ G I S K +
Sbjct: 18 TTANGPTTNSHGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLV 77
Query: 92 LDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIAN 144
DK T + GYGFV++ A A+ LQ K I AR NLY++
Sbjct: 78 RDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 137
Query: 145 LPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 138 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRVEAEEAIKGLNGQKP 197
Query: 204 PGSKEPLLVKFADS 217
G+ EP+ VKFA++
Sbjct: 198 SGAAEPITVKFANN 211
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 301 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 360
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 38 TNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
+NN ++ SP SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 61 SNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 120
Query: 98 KCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFK 150
+ GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 121 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMT 180
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP
Sbjct: 181 QKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEP 240
Query: 210 LLVKFADS 217
+ VKFA++
Sbjct: 241 ITVKFANN 248
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 321 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 380
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 12/219 (5%)
Query: 10 SNATSPANTHSSSSSNTGSQNGGTHPITTN--NVQHNGSPGTPTGPEQLSKTNLYIRGLT 67
S A P ++ T NG T T N N + SP E SKTNL + L
Sbjct: 16 SWAAEPWTGQVIAAMETQLSNGPTCNNTANCPNTINCSSPVESNNTED-SKTNLIVNYLP 74
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAVKAL-----Q 121
Q+ T ++L ++ G I S K + DK T + GYGFV++ A A+ L Q
Sbjct: 75 QNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQ 134
Query: 122 DKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSK 178
K I AR NLY++ LP + +LE L ++Y ++++RIL D S+
Sbjct: 135 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSR 194
Query: 179 GVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
GVGF R + + + ++ I+ NG PG+ EP+ VKFA++
Sbjct: 195 GVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANN 233
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 57 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 116
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 117 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 176
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 177 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 225
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 298 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 357
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
SP G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV
Sbjct: 67 SPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFV 126
Query: 106 DFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLL 158
++ A A+ LQ K I AR NLY++ LP + +LE L
Sbjct: 127 NYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF 186
Query: 159 AKYVTVVSTRILRDN----NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+ VKF
Sbjct: 187 SQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKF 246
Query: 215 ADS 217
A++
Sbjct: 247 ANN 249
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 322 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 381
>gi|259013331|ref|NP_001158376.1| Hu/elav protein [Saccoglossus kowalevskii]
gi|32307761|gb|AAP79277.1| Hu/elav [Saccoglossus kowalevskii]
Length = 357
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 34 HP---ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
HP + N + N +P PE SKTNL I L Q T +++ ++ S G I S K
Sbjct: 10 HPDAVMQQNGIMRNNGGTSPLIPED-SKTNLIINYLPQTMTQEEIKSLFSSIGEIESCKL 68
Query: 91 ILDKTTNKC---------------RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMA 130
I DK T C GY FV++ A A+ LQ K I A
Sbjct: 69 IRDKVTGTCPADIQESEFAERGQSLGYAFVNYHKAADAEKAINTLNGLRLQAKTIKVSYA 128
Query: 131 RQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLES 187
R Q NLY+ LP + DLE + ++++RIL D+ S+GVGF R +
Sbjct: 129 RPSSQAIKDANLYVCGLPKTMAQKDLEEMFTSCGRIITSRILCDSVTGHSRGVGFIRFDK 188
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + ++ I+ +NG+ PG+ + + VKFA++
Sbjct: 189 RTEAEEAIKRYNGTIPPGAVDAITVKFANN 218
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ +T + L + +G + + K + D +TNKC+G+GFV + A+ A+ L
Sbjct: 277 IFVYNLSPETEESLLWQLFGPFGAVTNVKVMRDFSTNKCKGFGFVTMTNYDEAVVAIAXL 336
Query: 121 QDKGIHAQM 129
+ A++
Sbjct: 337 NGYALGARV 345
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 97 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 156
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 157 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 216
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 217 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 265
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 338 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 397
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 61 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 121 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 180
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 181 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 229
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLF 198
+++ NL + E L L + V + +++RD N N KG GF + + D+ I
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQL 251
NG L L V F + A G ++ + P E RL G++ +DS +
Sbjct: 362 NGYRL--GDRVLQVSFKTN-------KAEGKSMDKEPEVERRLSGKEHSDSAV 405
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++ + S GPI S++ + D T GYGFV++ + A A
Sbjct: 73 SGTNLIVNYLPQDMTDREFYALFSTTGPIESSRIMRDFKTCYSFGYGFVNYLTEEGAQRA 132
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K+L ++K + AR +E TNLY+ NLP E L+ + KY +V I
Sbjct: 133 IKSLNGVTVRNKRLKVSYARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNI 192
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
LRD +GV F R +++ + I N GS +PL V+ A+ K++
Sbjct: 193 LRDKMTGKPRGVAFIRYNKREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGKQKA 247
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
+T N + S P G E+L +TNLY+ L + T++ L + +YG I+ + DK
Sbjct: 139 VTVRNKRLKVSYARPAG-EELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKM 197
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T K RG F+ + A A+ AL +
Sbjct: 198 TGKPRGVAFIRYNKREEAQEAIAALNN 224
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRD 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 278 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 337
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 16 ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDL 75
+N +SS+SN S N P SP SKTNL + L Q+ T ++
Sbjct: 30 SNGPTSSTSNGPSSNNRNCP----------SPMQTGAATDDSKTNLIVNYLPQNMTQEEF 79
Query: 76 INMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMA 130
++ G I S K + DK T + GYGFV++ A A+ LQ K I A
Sbjct: 80 RSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYA 139
Query: 131 RQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLES 187
R NLY++ LP + +LE L ++Y ++++RIL D S+GVGF R +
Sbjct: 140 RPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDK 199
Query: 188 KDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+ + ++ I+ NG G+ EP+ VKFA++
Sbjct: 200 RIEAEEAIKGLNGQKPSGATEPITVKFANN 229
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 109 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMIQKELEQLFSQYGRIITSRI 168
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 217
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 290 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 349
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
SP G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV
Sbjct: 75 SPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFV 134
Query: 106 DFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLL 158
++ A A+ LQ K I AR NLY++ LP + +LE L
Sbjct: 135 NYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF 194
Query: 159 AKYVTVVSTRILRDN----NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+ VKF
Sbjct: 195 SQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKF 254
Query: 215 ADS 217
A++
Sbjct: 255 ANN 257
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 330 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 389
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 88 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 147
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 148 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 207
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 208 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 256
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 329 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 388
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 61 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 121 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 180
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 181 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 229
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
SP G SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV
Sbjct: 31 SPMQTGGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFV 90
Query: 106 DFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLL 158
++ A A+ LQ K I AR NLY++ LP + +LE L
Sbjct: 91 NYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLF 150
Query: 159 AKYVTVVSTRILRDN----NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+ VKF
Sbjct: 151 SQYGRIITSRILVDQVTGPTGGSRGVGFIRFDKRIEAEEAIKGLNGQKPSGAAEPITVKF 210
Query: 215 ADS 217
A++
Sbjct: 211 ANN 213
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 286 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 345
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 80 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 139
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 140 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 199
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 200 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 248
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 321 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 380
>gi|380487787|emb|CCF37816.1| sporulation-specific protein [Colletotrichum higginsianum]
Length = 393
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQ---------EQDPTNL 140
AI+D +T C+G+GF F + ++ G AR+ ++ TNL
Sbjct: 128 AIIDTSTGACKGFGFAKFYDVRDSEMCIRGFHRLGYEVGFARESFNSRLKAEGDEGSTNL 187
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
YI+NLP + E DL + Y ++S++ILRD+ S+GVGFAR ES+D CD +I+ FNG
Sbjct: 188 YISNLPKSLTENDLGDIFGGY-HIMSSKILRDSMGNSRGVGFARFESRDVCDTVIKQFNG 246
Query: 201 STLPGSKEPLL--VKFADS 217
+P +E ++ +++AD+
Sbjct: 247 --IPVGEEGMVMNIRYADT 263
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 61 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 121 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 180
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 181 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 229
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 61 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 121 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 180
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 181 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 229
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 302 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 361
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 61 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 120
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 121 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 180
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 181 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 229
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 80 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 139
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 140 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 199
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 200 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 248
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 321 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 380
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 20 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRD 79
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 80 LGYGFVNYPDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 139
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 140 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
Query: 212 VKFADSGLKKRG 223
VKFA++ +K G
Sbjct: 200 VKFANNPSQKTG 211
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 279 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 338
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 80 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 139
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 140 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 199
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 200 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 248
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 321 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 380
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 10 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 69
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 70 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 129
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 130 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 178
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 251 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 310
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 108/225 (48%), Gaps = 22/225 (9%)
Query: 7 HRVSNATSPANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGL 66
H ++ T P +S+S S+N G P+ NN SP PE KTNL I L
Sbjct: 82 HALATCTKP---FASTSPTVTSKNSG--PV--NNTAVTNSP-----PEN--KTNLIINYL 127
Query: 67 TQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----Q 121
+ + +++ + S G + S K + +KT+ + GY FV F A A+K L Q
Sbjct: 128 PPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGKAIKTLNGLRLQ 187
Query: 122 DKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSK 178
+K + +AR + NLYI LP + +LE L + +++ RIL D S+
Sbjct: 188 NKTVKVSLARPSSEAIKGANLYICGLPRKMTQPELEKLFSACGHIITARILYDTKTGLSR 247
Query: 179 GVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
GV F R + + + + I+ NG PG+ EP+ VKFA+S R
Sbjct: 248 GVAFIRYDQRTEAEAAIRKLNGYLPPGASEPITVKFANSPSSNRA 292
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + + K I D T+KC+G+GFV + AL A+ +L
Sbjct: 532 IFVYNLAPDTEESTLWQLFGPFGAVQTVKVIRDPITSKCKGFGFVTMSNYEEALLAIHSL 591
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 18/186 (9%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR----------GYGFVD 106
++TNL + L Q + ++L ++ S G + S K I DK + GYGFV+
Sbjct: 53 ARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAGNTQTLVHHRSHSLGYGFVN 112
Query: 107 FESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLA 159
F + A+ A+ L Q K + AR + NLYI+ LP + DLE + +
Sbjct: 113 FVNPSDAVRAINTLNGLRLQSKTLKVSYARPSSEMIKDANLYISGLPRTASQQDLEDMFS 172
Query: 160 KYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG 218
Y ++++R+L D + S+GV F R + + + + I+ NG T PGS EP+ VKFA +
Sbjct: 173 HYGRIINSRVLVDQASGVSRGVAFIRFDKRSEAEDAIKHLNGHTPPGSAEPITVKFATNP 232
Query: 219 LKKRGA 224
+ RG+
Sbjct: 233 NQARGS 238
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + + +DL +M S YG II+++ ++D+ + RG F+ F+ A
Sbjct: 146 EMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASGVSRGVAFIRFDKRSEA 205
Query: 114 LAAVKAL 120
A+K L
Sbjct: 206 EDAIKHL 212
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L + +G +++ K I D T+KC+G+GFV + A A+ +L
Sbjct: 288 IFIYNLGQEADEAILWQLFGPFGAVVNVKVIRDFNTSKCKGFGFVTMSNYEEAAMAIHSL 347
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD+++ +
Sbjct: 88 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 147
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 148 EDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQ 207
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 208 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 266
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD+++ +
Sbjct: 96 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 155
Query: 114 LAAVKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 156 EDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQ 215
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 216 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 274
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD+++ +
Sbjct: 88 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 147
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 148 EDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQ 207
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 208 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 266
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L Q + +L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 34 AKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERA 93
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP N + D+E + + Y ++++R+
Sbjct: 94 ISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKNMTQKDVEDMFSCYGRIINSRV 153
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D + S+GV F R + + + ++ ++ NG PG EP+ VKFA
Sbjct: 154 LVDQSTGMSRGVAFIRFDKRSEAEEAVKSLNGQKPPGVTEPITVKFA 200
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL ++ T KD+ +M S YG II+++ ++D++T RG F+ F+ A
Sbjct: 117 DTIKDANLYISGLPKNMTQKDVEDMFSCYGRIINSRVLVDQSTGMSRGVAFIRFDKRSEA 176
Query: 114 LAAVKAL 120
AVK+L
Sbjct: 177 EEAVKSL 183
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 35 PITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK 94
P++ +++ GS G P S ++I L QD + L M +G + + K I D
Sbjct: 238 PMSVDHMGGMGSVGVPG--NSTSGWCIFIYNLGQDADESILWQMFGPFGAVTNVKVIRDF 295
Query: 95 TTNKCRGYGFV---DFESGGYALAAV 117
TNKC+G+GFV ++E A+A++
Sbjct: 296 NTNKCKGFGFVTMTNYEEAAMAIASL 321
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNL I L Q TD++ +M GP+ ++K + DK T G+GFVD+ A
Sbjct: 16 LSKTNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTGYSYGFGFVDYNLESDASK 75
Query: 116 AVKA-----LQDKGIHAQMARQQEQ-DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
A++ LQ+K I +R EQ NLY+ N+P + +LE + + + ++ +RI
Sbjct: 76 AIQTLNGLQLQNKRIKVAYSRSGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRI 135
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L D + SKGVGF ++D+ + I +G G + P VK A+
Sbjct: 136 LTDVGSGQSKGVGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHAE 183
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQ+ NLY+R + + T +L + S +G II ++ + D + + +G GF+ F + A
Sbjct: 99 EQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTDVGSGQSKGVGFILFNTRDQA 158
Query: 114 LAAVKAL 120
A+ L
Sbjct: 159 ENAISHL 165
>gi|154269906|ref|XP_001535844.1| hypothetical protein HCAG_09223 [Ajellomyces capsulatus NAm1]
gi|150415661|gb|EDN11013.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 466
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVD-FESGGYALAAV 117
TN+YIRG +TTD+ L S++G I KAI+D T C+G+ + G + L
Sbjct: 289 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFDACENCIRGFFHLGYQ 348
Query: 118 KALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-T 176
+ K ++++ +++ TN+Y N+P+++ E DL Y VVS +I RD
Sbjct: 349 ASFAQKSRNSRLKDLEDKSSTNIYCTNVPIDWVEADLRRHFQPY-QVVSEKISRDEKTGV 407
Query: 177 SKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKR 222
SK VGFAR ES++ ++++ F+ T + LL++FAD+ +K+
Sbjct: 408 SKEVGFARFESREIAEKVLSEFHNVTAKDGVK-LLLRFADTKAQKQ 452
>gi|226291936|gb|EEH47364.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 535
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVD-FESGGYALAAV 117
TN+YIRG +TTD+ L S++G I KAI+D T C+G+ + G + L
Sbjct: 303 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFDACENCIRGFFHLGYQ 362
Query: 118 KALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-T 176
+ K ++++ +++ TN+Y N+P+++ E DL Y VVS +I RD
Sbjct: 363 ASFAQKSRNSRLKDLEDKCSTNVYCTNVPIDWVEADLRRHFQPY-QVVSEKISRDEKTGV 421
Query: 177 SKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
SK VGFAR ES++ ++++ F+ T + LL++FAD+ +K
Sbjct: 422 SKEVGFARFESREIAEKVLSQFHNVTAKDGVK-LLLRFADTKAQK 465
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 50 PTGPE-QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFE 108
P G E +KTNL I L Q+ + ++L ++ S G + S K I DK GYGFV++
Sbjct: 8 PMGDEPSDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYV 67
Query: 109 SGGYALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKY 161
+ A A+ LQ K I AR NLYI+ LP + ++E + +Y
Sbjct: 68 NPSDAERAINTLNGLRLQSKTIKVSYARPSSDGIKDANLYISGLPKTMTQKNVEDMFTQY 127
Query: 162 VTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
++++RIL D + S+GV F R + + + ++ I+ NGS G+ EP+ VKFA
Sbjct: 128 GRIINSRILVDQASGLSRGVAFIRFDKRSEAEEAIKDLNGSKPSGASEPITVKFA 182
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
+++ L QD + L M +G + + K I D T+KC+G+GFV ++E A++++
Sbjct: 242 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTSKCKGFGFVTMTNYEEAAMAISSL 301
>gi|452838679|gb|EME40619.1| hypothetical protein DOTSEDRAFT_65305 [Dothistroma septosporum
NZE10]
Length = 460
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 30/179 (16%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q +TN+YIRGL +TTD+ L ++G I S+K+I+D +T C+G+GFV + + A
Sbjct: 172 QRGETNVYIRGLLPETTDEMLEQWGLRFGDIKSSKSIIDLSTGLCKGFGFVKYHNYEDAE 231
Query: 115 AAVKALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVV 165
++ G AR+ +++ TNLY++NLP + E +L L A +
Sbjct: 232 NCIRGFHYLGYEVSFARESFYSKLKTFSDENNTNLYVSNLPKSMNEHELAQLFAPHKVC- 290
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV--KFADSGLKKR 222
E++D CD++I+ FN T+ E L V +FAD+ +K+
Sbjct: 291 ------------------SFETRDDCDEVIKTFNNHTIKSQGEELQVQIRFADTQEQKQ 331
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 22 SSSNTGSQNGGTHPITTNNVQHN------GSPGTP----TGPEQLSKTNLYIRGLTQDTT 71
S++N G P+T+NN N GS G+ ++ S TNL + L QD T
Sbjct: 80 SANNLGGNMCNLLPMTSNNSLSNLCGLSLGSGGSDDHMMMHDQRSSNTNLIVNYLPQDMT 139
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIH 126
D++L + GPI + + + D T GY FVDF S + A+K L ++K +
Sbjct: 140 DRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLK 199
Query: 127 AQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFA 183
AR + TNLY+ NLP + L+++ KY ++V ILRD +GV F
Sbjct: 200 VSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFV 259
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
R +++ + I N G +PL V+ A+ K + A
Sbjct: 260 RYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 300
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-------NKCRGYGFVDFES 109
S+TNL + L Q T++++ ++ S G + S K + DK + GYGFV++
Sbjct: 72 SRTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNYHR 131
Query: 110 GGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYV 162
A AV L Q+K + AR + NLYI+ LP + +LE++ Y
Sbjct: 132 PQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELETIFRPYG 191
Query: 163 TVVSTRIL-RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++++R+L +D N+ KGVGF R + + + ++ IQ NG+T G +P+ VKF+++
Sbjct: 192 EIITSRVLIQDGNDKPKGVGFIRFDQRKEAERAIQALNGTTPKGLTDPITVKFSNT 247
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + + K I D TN+C+GYGFV + A+ A+++L
Sbjct: 317 IFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDAATNQCKGYGFVTMTNYEEAMLAIRSL 376
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 51 TGPEQLSK--TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFE 108
G E L K TN++++ L D TD+DL + S YG +IS+K ++D N GYGFV F
Sbjct: 84 VGGEILEKDSTNIFVKHLPNDFTDEDLAKLFSAYGNVISSKVMIDPKGN-SYGYGFVRFS 142
Query: 109 SGGYALAAVKAL-----QDKGIHAQMARQ----QEQDPTN-LYIANLPLNFKECDLESLL 158
+ + AA+K L Q+K + +++ ++P+N L+I LP + + L L
Sbjct: 143 NPNESQAAIKELDGFQFQNKKLLCRLSNLYTNLNSKNPSNNLFIKPLPADVTDEQLRKLF 202
Query: 159 AKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG 218
Y +V +++ D N SK GF R + + I NG + PL+VK+AD+
Sbjct: 203 EPYGKIVECKVMLDQNGQSKFAGFVRFFNDSEAASAIDAMNGIKITKDSYPLVVKYADTE 262
Query: 219 LKK 221
+K
Sbjct: 263 QQK 265
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL++ L D L + SQYG + S + I DK T + +GYGFV F + A K
Sbjct: 511 TNLFVFHLPPFIDDAYLFQLFSQYGKLQSVRVITDKDTGENKGYGFVKFYNREDAFKCQK 570
Query: 119 ALQDKGIHAQMARQQEQDPTNL 140
+ I ++ + + ++PT +
Sbjct: 571 EMNGFRIGSKYLKVKLKNPTTI 592
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 42 QHNGSPGTPT---GPE-QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
Q G+ +PT PE + S TNL I L QD TD++L N+ S G I + K + D T
Sbjct: 91 QQGGNFSSPTPGNNPEDRTSATNLIINYLPQDMTDRELYNLFSSCGSINTCKIMRDFKTG 150
Query: 98 KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFK 150
GYGFVD+ + + A++ L ++K + AR Q TNLY+ NL N
Sbjct: 151 YSFGYGFVDYNAEADSEDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNIN 210
Query: 151 ECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
+ L+ + + + +V ILRD +GV F R +++ + I+ N + G +P
Sbjct: 211 DEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIKSLNNTIPEGGSQP 270
Query: 210 LLVKFADSGLKKRGA-------GAGGP 229
+ V+ A+ K + A G GGP
Sbjct: 271 IWVRLAEEHGKAKAAQFMSQIGGGGGP 297
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 22 SSSNTGSQNGGTHPITTNNVQHN------GSPGTP----TGPEQLSKTNLYIRGLTQDTT 71
S++N G P+T+NN N GS G+ ++ S TNL + L QD T
Sbjct: 80 SANNLGGNMCNLLPMTSNNSLSNLCGLSLGSGGSDDHMMMHDQRSSNTNLIVNYLPQDMT 139
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIH 126
D++L + GPI + + + D T GY FVDF S + A+K L ++K +
Sbjct: 140 DRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLK 199
Query: 127 AQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFA 183
AR + TNLY+ NLP + L+++ KY ++V ILRD +GV F
Sbjct: 200 VSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFV 259
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
R +++ + I N G +PL V+ A K + A
Sbjct: 260 RYNKREEAQEAISALNNVIPEGGSQPLSVRLAQEHGKAKAA 300
>gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The C-Fos
Rna
gi|13096204|pdb|1G2E|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The Tumor
Necrosis Factor Alpha Rna
Length = 167
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 1 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 60
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 61 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 120
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA
Sbjct: 121 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 167
>gi|195132500|ref|XP_002010681.1| GI21573 [Drosophila mojavensis]
gi|193907469|gb|EDW06336.1| GI21573 [Drosophila mojavensis]
Length = 367
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 23 SSNTGSQNGGTHPITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKD 74
S+N+ N P+ +NN +N GS G+ ++ S TNL + L QD TD++
Sbjct: 73 SANSLGGNICNMPMASNNSLNNLCGLSIGSGGSDDLMNDQRTSNTNLIVNYLPQDMTDRE 132
Query: 75 LINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQM 129
L + GPI + + + D T GY FVDF S + A+K L ++K +
Sbjct: 133 LYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSY 192
Query: 130 AR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLE 186
AR + TNLY+ NLP + L+++ KY ++V ILRD +GV F R
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 187 SKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
+++ + I N G +PL V+ A+ K + A
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 290
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L N+ S GPI + K + D T GYGFVD+++ +
Sbjct: 88 DRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDS 147
Query: 114 LAAVKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 148 EDAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQ 207
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 208 RNILRDKLTGRPRGVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 266
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 22 SSSNTGSQNGGTHPITTNNVQHN------GSPGTP----TGPEQLSKTNLYIRGLTQDTT 71
S++N G P+T+NN N GS G+ ++ S TNL + L QD T
Sbjct: 72 SANNLGGNMCNLLPMTSNNSLSNLCGLSLGSGGSDDHMMMHDQRSSNTNLIVNYLPQDMT 131
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIH 126
D++L + GPI + + + D T GY FVDF S + A+K L ++K +
Sbjct: 132 DRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLK 191
Query: 127 AQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFA 183
AR + TNLY+ NLP + L+++ KY ++V ILRD +GV F
Sbjct: 192 VSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFV 251
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
R +++ + I N G +PL V+ A K + A
Sbjct: 252 RYNKREEAQEAISALNNVIPEGGSQPLSVRLAQEHGKAKAA 292
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 35 PITTNNVQHN---------GSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPI 85
P+T+NN +N GS ++ S TNL + L QD TD++L + GPI
Sbjct: 95 PMTSNNSLNNLCGLSLGSGGSDDHMLNDQRPSNTNLIVNYLPQDMTDRELYALFRAIGPI 154
Query: 86 ISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPT 138
+ + + D T GY FVDF S + A+K L ++K + AR + T
Sbjct: 155 NTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDT 214
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
NLY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 215 NLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISA 274
Query: 198 FNGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 275 LNNVIPEGGSQPLSVRLAEEHGKAKAA 301
>gi|432853222|ref|XP_004067600.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oryzias latipes]
Length = 346
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q T +L ++ S G + S K I DK GYGFV+F + A A
Sbjct: 29 AQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAGHSLGYGFVNFVNPNDAERA 88
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + DLE + A + ++++R+
Sbjct: 89 ISTLNGLRLQSKTIKVSFARPSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRV 148
Query: 170 LRDN------------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D + S+GV F R + + + + ++ NG T PG EP+ VKFA
Sbjct: 149 LVDQASGTSGDICNPPSGLSRGVAFIRFDKRSEAEDAVKHLNGHTPPGGSEPITVKFA 206
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I LTQD + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 266 IFIYNLTQDADEGMLWQMFGPFGAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSL 325
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
LSKTNL I L Q TD++ +M GP+ ++K + DK T G+GFVD+ A
Sbjct: 58 LSKTNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTGYSYGFGFVDYNLESDASK 117
Query: 116 AVKA-----LQDKGIHAQMARQQEQ-DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
A++ LQ+K I +R EQ NLY+ N+P + +LE + + + ++ +RI
Sbjct: 118 AIQTLNGLQLQNKRIKVAYSRSGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRI 177
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
L D + SKGVGF ++D+ + I +G G + P VK A+
Sbjct: 178 LTDVGSGQSKGVGFILFNTRDQAENAISHLDGFVPEGGELPFNVKHAE 225
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
EQ+ NLY+R + + T +L + S +G II ++ + D + + +G GF+ F + A
Sbjct: 141 EQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTDVGSGQSKGVGFILFNTRDQA 200
Query: 114 LAAVKAL 120
A+ L
Sbjct: 201 ENAISHL 207
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 8/167 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I L Q TD +L +M GP++ + I D+ + GYGFV +E+ A A+
Sbjct: 29 RTNLIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENPKDAKRAI 88
Query: 118 K-----ALQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ A+Q+K I AR + +NLYIANL + E + S+ + Y +V+ +L
Sbjct: 89 ETLSGLAIQNKTIKVSYARPNTELIKDSNLYIANLGCSVTEEAIHSMFSTYGKIVTLNLL 148
Query: 171 RD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
+D KGV F R + + I NG+ + G+ +P+LVK A+
Sbjct: 149 KDPITGKPKGVAFVRYSKQSEAKDAITALNGTMMTGNDKPMLVKVAE 195
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + +NLYI L T++ + +M S YG I++ + D T K +G FV + A
Sbjct: 111 ELIKDSNLYIANLGCSVTEEAIHSMFSTYGKIVTLNLLKDPITGKPKGVAFVRYSKQSEA 170
Query: 114 LAAVKAL-------QDKGIHAQMARQQEQDPTNLYIAN 144
A+ AL DK + ++A + + ++ N
Sbjct: 171 KDAITALNGTMMTGNDKPMLVKVAEEHGKQNVRYFMPN 208
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 129 MARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLES 187
+AR ++D TNL I LP + + +L S+ +V RI+RD + S G GF E+
Sbjct: 21 VARGDDEDRTNLIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYEN 80
Query: 188 KDKCDQMIQLFNG 200
+ I+ +G
Sbjct: 81 PKDAKRAIETLSG 93
>gi|18858613|ref|NP_571527.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Danio rerio]
gi|6694223|gb|AAF25187.1|AF184244_1 ribonucleoprotein [Danio rerio]
Length = 324
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ + +L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 16 SKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPNDAERA 75
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + D+E + +Y ++++R+
Sbjct: 76 ISTLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRV 135
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D + S+GV F R + + + + I+ NG PG+ E + VKFA S
Sbjct: 136 LVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAAS 184
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + T KD+ M +YG II+++ ++D+ + RG F+ F+ A
Sbjct: 99 DSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEA 158
Query: 114 LAAVKAL 120
A+K L
Sbjct: 159 EDAIKDL 165
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV +E A+A++
Sbjct: 244 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASL 303
>gi|348504910|ref|XP_003440004.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oreochromis
niloticus]
Length = 369
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 16/184 (8%)
Query: 48 GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK------TTNKCR- 100
G ++ ++TNL + L Q + +L ++ S G + S K I DK T N+
Sbjct: 46 GEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESAKLIRDKVAGNDETKNESHS 105
Query: 101 -GYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKEC 152
GYGFV+F + A A+ L Q K I AR NLYI+ LP +
Sbjct: 106 LGYGFVNFVNPSDAERAISTLNGLRLQSKTIKVSFARPSSDAIKDANLYISGLPRTLSQQ 165
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
D+E + + Y ++++R+L D + S+GV F R + + + D ++ NG T PGS EP+
Sbjct: 166 DVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDAVKHLNGHTPPGSAEPIT 225
Query: 212 VKFA 215
VKFA
Sbjct: 226 VKFA 229
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L Q+ + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 289 IFIYNLGQEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 348
>gi|195328687|ref|XP_002031046.1| GM24242 [Drosophila sechellia]
gi|194119989|gb|EDW42032.1| GM24242 [Drosophila sechellia]
Length = 244
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 89/193 (46%), Gaps = 12/193 (6%)
Query: 50 PTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES 109
P+ E KTNL + L QD T+ +L + S+YG I K I + T YGFVDF S
Sbjct: 32 PSRTEVRDKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTGISCCYGFVDFVS 91
Query: 110 GGYALAAVKAL-----QDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
A AAV L + K + AR E + TNLY+ANLP E + L A + +
Sbjct: 92 ERQAAAAVNNLNGYETRGKRLKVAFARPSEYENTNLYVANLPTYMDEKKIRELFAPFGNI 151
Query: 165 VSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
+ +LR NN +GV F E ++ + + G+ PL VKF +
Sbjct: 152 LDVTLLRHRFNNKFRGVAFLDFELVRDAEEAKYGMDRHMIKGAFRPLKVKFVER------ 205
Query: 224 AGAGGPNIYRGPG 236
A +G + YR G
Sbjct: 206 AKSGPTSHYRHKG 218
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++ ++ G I S K + DK T + GYGFV++ A A
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 104 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 164 LVGQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANN 212
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 285 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAITSL 344
>gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rbd1-Rbd2 Complexed With The
Au-Rich Element
Length = 174
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T + ++ G I S K + DK T + GYGFV++ A A
Sbjct: 3 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 62
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + ++E L ++Y ++++RI
Sbjct: 63 INTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 122
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D S+GVGF R + + + ++ I+ NG G+ EP+ VKFA++
Sbjct: 123 LLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANN 171
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 123 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 182
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 183 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 242
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD +GV F R +++ + I N G +PL V+ A+ K + A
Sbjct: 243 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 298
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 189 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 247
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 248 TGRPRGVAFVRYNKREEAQEAISALNN 274
>gi|28279908|gb|AAH44184.1| Elavl1 protein [Danio rerio]
Length = 324
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ + +L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 16 SKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAERA 75
Query: 117 VKA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + D+E + +Y ++++R+
Sbjct: 76 ISTLNGLRLQSKTIKVSYARPSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRV 135
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D + S+GV F R + + + + I+ NG PG+ E + VKFA S
Sbjct: 136 LVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGAAEQMTVKFAAS 184
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + T KD+ M +YG II+++ ++D+ + RG F+ F+ A
Sbjct: 99 DSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEA 158
Query: 114 LAAVKAL 120
A+K L
Sbjct: 159 EDAIKDL 165
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV +E A+A++
Sbjct: 244 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTHYEEAAMAIASL 303
>gi|242005325|ref|XP_002423520.1| protein elav, putative [Pediculus humanus corporis]
gi|212506634|gb|EEB10782.1| protein elav, putative [Pediculus humanus corporis]
Length = 373
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 33/199 (16%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT--------------- 95
T PE+ SKTNL + L Q T +++ ++ S G + S K I DK
Sbjct: 34 TAPEE-SKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKAGLTFLLFFRIEMGGG 92
Query: 96 ------TNKCR---GYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP--TN 139
N+ GYGFV+++ A A+ L Q+K I AR + N
Sbjct: 93 GRERGRINRILFSLGYGFVNYQRPEDAEKAINTLNGLRLQNKTIKVSFARPSSESIKGAN 152
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY++ LP N + DLESL + Y ++++RIL DN SKGVGF R + + + ++ I
Sbjct: 153 LYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEAERAISEL 212
Query: 199 NGSTLPGSKEPLLVKFADS 217
NGS S +P+ VKFA++
Sbjct: 213 NGSIPKNSTDPITVKFANN 231
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLY+ GL ++ T +DL ++ S YG II+++ + D T +G GF+ F+ A
Sbjct: 146 ESIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRMEA 205
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLN 148
A+ L + DP + AN P N
Sbjct: 206 ERAISELNGS------IPKNSTDPITVKFANNPSN 234
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + L + +G + S K I D TNKC+G+GFV + A+ A+++L
Sbjct: 292 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 351
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + S+YG I S ++ T K R +GF++FES A+ AV+
Sbjct: 217 NVFVKNLSESTTKEDLVKIFSEYGNITSA-VVMVGTDGKSRCFGFINFESPDDAVRAVEE 275
Query: 120 LQDKGIH--------AQMARQQEQDPT-----------------NLYIANLPLNFKECDL 154
L K I+ AQ ++E D NLY+ NL + L
Sbjct: 276 LNGKKINDKEWYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGISDDQL 335
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +++RD N SKG GF ++++ Q I NG L G +PL V F
Sbjct: 336 RELFSTFGKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSG--KPLYVAF 393
Query: 215 A 215
A
Sbjct: 394 A 394
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
L T+LY+ L TD L + SQ G ++S + D + + GY +V+F + A
Sbjct: 34 LPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAAR 93
Query: 116 AVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++ + R +DP+ N++I NL L + + ++S
Sbjct: 94 ALEMLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILS 153
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
++ D+ SKG GF + E ++ ++ NG
Sbjct: 154 CKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLNG 187
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI+ L + T ++L M S+YGP+ S D++ K RG+GFV++E+ A AV+
Sbjct: 238 TNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADES-GKHRGFGFVNYENHESASKAVE 296
Query: 119 ALQDKGIH----------------AQMARQQEQDP---------TNLYIANLPLNFKECD 153
AL DK A++ R EQ NLYI NL + +
Sbjct: 297 ALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEK 356
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L++ + T+ S ++++D+ S+G GF + D+ + + NG L GSK PL V
Sbjct: 357 LQAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMNGKML-GSK-PLYVS 414
Query: 214 FA 215
A
Sbjct: 415 LA 416
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L + +K L + + +G I+S K +D +T +GYGFV + + A AA+K
Sbjct: 146 NIFIKNLDETIDNKALHDTFAAFGDILSCKVAMD-STGASKGYGFVHYVTAESAEAAIKG 204
Query: 120 -----LQDK----GIHA-QMARQQEQDP-----TNLYIANLPLNFKECDLESLLAKYVTV 164
L DK GIH + RQ + D TNLYI NLP +L + +KY V
Sbjct: 205 VNGMQLNDKVVFVGIHVPRRERQAKIDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPV 264
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFN 199
S + D + +G GF E+ + + ++ +
Sbjct: 265 TSAAVQADESGKHRGFGFVNYENHESASKAVEALH 299
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 15/197 (7%)
Query: 16 ANTHSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDL 75
ANT + S+ + N + P + + N SP + T+LY+ L T+ L
Sbjct: 20 ANTLTPPSAAAPALNTPSAPSSVSTATPNASPAS------QPNTSLYVGELDPTVTEAML 73
Query: 76 INMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQ 133
+ S GP+ S + D T + GY +V++ + A A++ L I + R
Sbjct: 74 YEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERALEQLNYSLIKNKACRIMWS 133
Query: 134 EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLE 186
++DP+ N++I NL L A + ++S ++ D+ SKG GF
Sbjct: 134 QRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGDILSCKVAMDSTGASKGYGFVHYV 193
Query: 187 SKDKCDQMIQLFNGSTL 203
+ + + I+ NG L
Sbjct: 194 TAESAEAAIKGVNGMQL 210
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 59 TNLYIRGLTQD-TTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
TN+Y++ L T+ DL + ++G I ST D+ +K RG+GFV+FE+ A AAV
Sbjct: 186 TNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDEN-DKSRGFGFVNFENSEAANAAV 244
Query: 118 KALQDKGIHA-----------------QMAR-----QQEQDP----TNLYIANLPLNFKE 151
+A+ +K I ++ R +QE+D +NLYI +LP + E
Sbjct: 245 EAMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVTE 304
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
L +K+ T+ S +I+ DNN S+G GF +S D+ IQ +GS + G +PL
Sbjct: 305 DALRDKFSKFGTITSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDG--KPLY 362
Query: 212 VKFA 215
V A
Sbjct: 363 VALA 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E +LY+ L + T+ L SQ G +IS + D + + GY +V+++ A
Sbjct: 3 EHQQNASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADA 62
Query: 114 LAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTV 164
A++ L + IH + R +++P N++I NL L + + T+
Sbjct: 63 KHALEELNFEKIHDKPCRIMWAQRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFGTI 122
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV-KFADSGLKKRG 223
+S ++ D S+G GF E ++ + I NG L K+ + V KF +++
Sbjct: 123 LSCKVAADEKGESRGYGFVHFEKEEDAQKAIDTVNGKML--LKQVVTVTKFLSRKEREQQ 180
Query: 224 AGAGGPNIY 232
G NIY
Sbjct: 181 GGRTYTNIY 189
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ +NLYI+ L +D T+ L + S++G I S K + D + RG+GFV+F+S A
Sbjct: 286 EKNKNSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDNNGD-SRGFGFVNFDSADEA 344
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
AA++ + H M D LY+A L ++ D + LA T+
Sbjct: 345 AAAIQEM-----HGSMI-----DGKPLYVA---LALRKVDRQKQLASRRTM 382
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 174
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 175 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 234
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD +GV F R +++ + I N G +PL V+ A+ K + A
Sbjct: 235 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 290
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 181 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 239
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 240 TGRPRGVAFVRYNKREEAQEAISALNN 266
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 53 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 112
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 113 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 172
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 232
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA------GAGGPNI 231
N G +PL V+ A+ K + A G PN+
Sbjct: 233 NNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVAAPNV 271
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 23/202 (11%)
Query: 37 TTNNVQHNGSPGTPTGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
TTNN H TGP SKTNL + L Q+ T ++ ++ G I S K + DK
Sbjct: 61 TTNN--HGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKI 118
Query: 96 TNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLN 148
T + GYGFV++ A A+ LQ K I AR NLY++ LP
Sbjct: 119 TGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKT 178
Query: 149 FKECDLESLLAKYVTVVSTRILRDN-------------NNTSKGVGFARLESKDKCDQMI 195
+ +LE L ++Y ++++RIL D S+GVGF R + + + ++ I
Sbjct: 179 MTQKELEQLFSQYGRIITSRILVDQVTGARVCLXSSGPAGGSRGVGFIRFDKRVEAEEAI 238
Query: 196 QLFNGSTLPGSKEPLLVKFADS 217
+ NG G+ EP+ VKFA++
Sbjct: 239 KGLNGQKPSGAAEPITVKFANN 260
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 333 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 392
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ ++ S TNL + L QD TD++L + GPI
Sbjct: 86 PMASNNSLNNLCGLSIGSGGSDDHMNDQRNSNTNLIVNYLPQDMTDRELYALFRAIGPIN 145
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 146 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 205
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 206 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 265
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 266 NNVIPEGGSQPLSVRLAEEHGKAKAA 291
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ ++ TNL + L QD TD++L + GPI + + + D T GY FVDF S A
Sbjct: 97 QAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDA 156
Query: 114 LAAVK-----ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+K +++K + AR + TNLY+ NLP + +LE + KY +V
Sbjct: 157 QNAIKTVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQ 216
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
ILRD +GV F R +++ + I N G+ +PL V+ A+
Sbjct: 217 KNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE 267
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD +L + +YG I+ + DK
Sbjct: 166 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKL 224
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV F A A+ AL +
Sbjct: 225 TGRPRGVAFVRFNKREEAQEAISALNN 251
>gi|21627809|emb|CAD37141.1| conserved hypothetical protein [Aspergillus fumigatus]
Length = 382
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 6/164 (3%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+YIRG TTD+ L + +++G I KAI+D T C+GY V S A +
Sbjct: 49 TNVYIRGFLPQTTDEMLHSYAARFGKIDRCKAIVDLDTGLCKGY--VKAASSMSACQLIS 106
Query: 119 ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TS 177
K ++++ +++ TN+Y N+P+ + E DL Y VVS +I RD S
Sbjct: 107 LPDSKSRNSRLKDLEDKTSTNIYCTNVPITWTEADLRHHFEPY-HVVSEKISRDEKTGVS 165
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
K VGFAR ++++ ++++ F+ + G K LL++FAD+ +K
Sbjct: 166 KEVGFARFDTREIAEKVLGEFHNISKNGVK--LLLRFADTKAQK 207
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ ++ TNL + L QD TD++L + GPI + + + D T GY FVDF S A
Sbjct: 90 QAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDA 149
Query: 114 LAAVK-----ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+K +++K + AR + TNLY+ NLP + +LE + KY +V
Sbjct: 150 QNAIKTVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQ 209
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
ILRD +GV F R +++ + I N G+ +PL V+ A+
Sbjct: 210 KNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD +L + +YG I+ + DK
Sbjct: 159 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKL 217
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV F A A+ AL +
Sbjct: 218 TGRPRGVAFVRFNKREEAQEAISALNN 244
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 93 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 152
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ--QEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 153 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 212
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 273 NNVIPEGGSQPLSVRLAEEHGKAKAA 298
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-------NKCRGYGFVDFES 109
++TNL + L Q T++++ ++ S G + S K + DK + GYGFV+F
Sbjct: 68 ARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNFHR 127
Query: 110 GGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYV 162
A AV L Q+K + AR + NLYI+ LP + +LE + Y
Sbjct: 128 SQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELEIIFRPYG 187
Query: 163 TVVSTRIL-RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++++R+L +D N+ KGVGF R + + + ++ I NG+T G +P+ VKF+++
Sbjct: 188 EIITSRVLVQDGNDKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVKFSNT 243
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+++I L +T + L + +G + + K I D TN+C+GYGFV + A+ A+++
Sbjct: 313 SIFIYNLAPETEENTLWQLFGPFGAVQNVKIIKDSATNQCKGYGFVTMTNYEEAMLAIRS 372
Query: 120 L 120
L
Sbjct: 373 L 373
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T ++L + YG II+++ ++ +K +G GF+ F+ A
Sbjct: 158 EGIKGANLYISGLPKTITQEELEIIFRPYGEIITSRVLVQDGNDKPKGVGFIRFDQRKEA 217
Query: 114 LAAVKAL 120
A+ AL
Sbjct: 218 ERAIAAL 224
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 174
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 175 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 234
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
LRD +GV F R +++ + I N G +PL V+ A+ + G G G
Sbjct: 235 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAE----EHGQGEGC 290
Query: 229 P 229
P
Sbjct: 291 P 291
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 181 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 239
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 240 TGRPRGVAFVRYNKREEAQEAISALNN 266
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 15/178 (8%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT-------NKCRGYGFVDF 107
+ ++TNL + L Q T++++ ++ S G + S K + DK + GYGFV+F
Sbjct: 30 ETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDKNVIYPGQPKGQSLGYGFVNF 89
Query: 108 ESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAK 160
A AV L Q+K + AR + NLYI+ LP + +LE++
Sbjct: 90 HRSQDAEQAVNVLNGLRLQNKVLKVSFARPSSEGIKGANLYISGLPKTITQEELETIFRP 149
Query: 161 YVTVVSTRIL-RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
Y ++++R+L ++ N+ KGVGF R + + + ++ I NG+T G +P+ VKF+++
Sbjct: 150 YGEIITSRVLVQEGNDKPKGVGFIRFDQRKEAERAIAALNGTTPKGLTDPITVKFSNT 207
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T ++L + YG II+++ ++ + +K +G GF+ F+ A
Sbjct: 122 EGIKGANLYISGLPKTITQEELETIFRPYGEIITSRVLVQEGNDKPKGVGFIRFDQRKEA 181
Query: 114 LAAVKAL 120
A+ AL
Sbjct: 182 ERAIAAL 188
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+++I L +T + L + +G + + K I D TN+C+GYGFV + A+ A+++
Sbjct: 277 SIFIYNLAPETEENTLWQLFGPFGAVQNVKVIKDSATNQCKGYGFVTMTNYEEAMLAIRS 336
Query: 120 L 120
L
Sbjct: 337 L 337
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 18/132 (13%)
Query: 113 ALAAVKALQDKGIHAQ----MARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
LAAV+ LQ + +Q A E TNL + LP E ++ SL + V S +
Sbjct: 5 VLAAVQDLQKQNGESQNTAAAASGSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVK 64
Query: 169 ILRDNN--------NTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLK 220
++RD N S G GF +Q + + NG L + L V FA +
Sbjct: 65 LVRDKNVIYPGQPKGQSLGYGFVNFHRSQDAEQAVNVLNGLRL--QNKVLKVSFA----R 118
Query: 221 KRGAGAGGPNIY 232
G G N+Y
Sbjct: 119 PSSEGIKGANLY 130
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL----- 120
+TQD +L ++ S G + S K I DK GYGFV++ + A A+ L
Sbjct: 1 MTQD----ELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAEKAINTLNGLRL 56
Query: 121 QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TS 177
Q K I AR + NLYI+ LP + D+E + +++ ++++R+L D S
Sbjct: 57 QSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLS 116
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+GV F R + + + ++ I FNG PGS EP+ VKFA
Sbjct: 117 RGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFA 154
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + T KD+ +M S++G II+++ ++D+TT RG F+ F+ A
Sbjct: 71 EVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEA 130
Query: 114 LAAVKAL 120
A+ +
Sbjct: 131 EEAITSF 137
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 216 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 275
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 93 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 152
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ--QEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 153 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 212
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 273 NNVIPEGGSQPLSVRLAEEHGKAKAA 298
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T
Sbjct: 136 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGVS 195
Query: 100 RGYGFVDFESGGYALAAVKALQ-----DKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
G FV + A A+ LQ K I AR NLY++ LP +
Sbjct: 196 LGXRFVKYSDPKKADKAINTLQGLKLQTKTIQVSYARPSSASIRDANLYVSGLPKTMSQK 255
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ E +
Sbjct: 256 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAESIT 315
Query: 212 VKFADSGLKKRGA 224
VKFA++ +++R A
Sbjct: 316 VKFANNQVRRRAA 328
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 366 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 425
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S+TNL I L Q+ T+ +L M G + + K + D T G+GFV+++ A+ A
Sbjct: 25 SRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRA 84
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
++ L Q+K I AR +++ TNLY+ NLP + E +L ++ + + +V +
Sbjct: 85 IQTLNGLQIQNKRIKVSYARPPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNL 144
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
L+D +GV F R + +++ I+ NG+ G P+ VK A+ K++ A G
Sbjct: 145 LKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISVKIAEEHGKQKAAYFAG 204
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E +TNLY+ L +D T+ +L N+ S +G I+ + DK T RG FV F+ A
Sbjct: 108 EDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEA 167
Query: 114 LAAVKAL 120
LAA++ L
Sbjct: 168 LAAIEHL 174
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 85 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 144
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 145 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 204
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 265 NNVIPEGGSQPLSVRLAEEHGKAKAA 290
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL I + + +D+ + G + S K I D+ T + GY FV++++ A AV
Sbjct: 9 RTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAV 68
Query: 118 KA-----LQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ LQ+K + AR E NLYI+ LP + KE ++E+L + ++++++L
Sbjct: 69 REMNGARLQNKTLKVSFARPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVL 128
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
+D + +G GF R + + + I N TLPG+ L VKFA+
Sbjct: 129 KDVSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLPGTNVKLTVKFAN 174
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 71 TDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
T +++ ++ + G + S K I DK T + GYGFV++ A A+ L Q+K I
Sbjct: 2 TQEEIRSLFASIGEVESCKLIRDKITGQSLGYGFVNYHRAEDAEKAINTLNGLRLQNKTI 61
Query: 126 HAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN--NNTSKGVG 181
AR ++ NLY++ +P + +LE+L A + ++++RIL D+ SKGVG
Sbjct: 62 KVSFARPSSENIKGANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGLSKGVG 121
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R +++ + ++ I+ NG+ G+ EP+ VKFA++
Sbjct: 122 FIRFDTRGEAERAIEKLNGTVPQGATEPITVKFANN 157
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L DT + L + +G + S K I D TNKC+G+GFV + AL A+++L
Sbjct: 249 IFVYNLAPDTEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEALVAIQSL 308
>gi|452979102|gb|EME78865.1| hypothetical protein MYCFIDRAFT_144462 [Pseudocercospora fijiensis
CIRAD86]
Length = 466
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 38/193 (19%)
Query: 46 SPGTPTGP------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
+P +P P Q +TN+YIRGL +TTD+ L +++G I S+K+I+D T C
Sbjct: 155 APSSPLKPLDRALENQRGETNVYIRGLLPETTDEMLEQWGTRFGDIKSSKSIIDLNTGLC 214
Query: 100 RGYGFVDFESGGYALAAVKALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFK 150
+G+GFV + + A ++ G AR+ +++ TNLY++NLP
Sbjct: 215 KGFGFVKYHNYEDAENCIRGFHYLGYEVSFARESFYSKLKTFSDENNTNLYVSNLPKTMN 274
Query: 151 ECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPL 210
E +L L A + ES+D C+++I+ FN T+ E L
Sbjct: 275 EHELAQLFAPHKV---------------------FESRDACEEVIKTFNNHTIKSQGEEL 313
Query: 211 --LVKFADSGLKK 221
+++AD+ +K
Sbjct: 314 QIQIRYADTQEQK 326
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 85 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 144
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 145 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 204
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 265 NNVIPEGGSQPLSVRLAEEHGKAKAA 290
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 27 GSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
GS N + +TN++ G G + TNL + L QD TD++L + GPI
Sbjct: 78 GSMNNMVNAASTNSLNCGGGGGRDGHGGGSNGTNLIVNYLPQDMTDRELYALFRTIGPIN 137
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF + + A+K+L ++K + AR + TN
Sbjct: 138 TCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGESIKDTN 197
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY +V ILRD +GV F R +++ + I
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257
Query: 199 NGSTLPGSKEPLLVKFAD 216
N G+ +PL V+ A+
Sbjct: 258 NNVIPEGASQPLTVRLAE 275
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 27 GSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
GS N + +TN++ G G + TNL + L QD TD++L + GPI
Sbjct: 70 GSMNNMVNAASTNSLNCGGGGGRDGHGGGSNGTNLIVNYLPQDMTDRELYALFRTIGPIN 129
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF + + A+K+L ++K + AR + TN
Sbjct: 130 TCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGESIKDTN 189
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY +V ILRD +GV F R +++ + I
Sbjct: 190 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 249
Query: 199 NGSTLPGSKEPLLVKFAD 216
N G+ +PL V+ A+
Sbjct: 250 NNVIPEGASQPLTVRLAE 267
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 99 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 158
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 159 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 218
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 219 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 278
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 279 NNVIPEGGSQPLSVRLAEEHGKAKAA 304
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 13/174 (7%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L Q T +L ++ G + S K I DK GYGFV++ + A A
Sbjct: 33 AKTNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAGHSLGYGFVNYLNPSDAERA 92
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + D+E + A+Y ++++R+
Sbjct: 93 ISTLNGLRLQSKTIKVSYARPSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRV 152
Query: 170 LRDN------NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L D + S+GV F R + + + + I+ NG PG+ E + VKFA S
Sbjct: 153 LVDQASGGAGDGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEAITVKFAAS 206
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC-----RGYGFVDFE 108
+ + NLYI GL + T KD+ +M ++YG II+++ ++D+ + RG F+ F+
Sbjct: 116 DTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASGGAGDGLSRGVAFIRFD 175
Query: 109 SGGYALAAVKAL 120
A A+K L
Sbjct: 176 KRAEAEDAIKDL 187
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 266 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 325
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 61 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 120
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ--QEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 121 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 180
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 181 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 240
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 241 NNVIPEGGSQPLSVRLAEEHGKAKAA 266
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 91 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 150
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 151 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 210
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD +GV F R +++ + I N G +PL V+ A+ K + A
Sbjct: 211 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 266
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 157 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 215
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 216 TGRPRGVAFVRYNKREEAQEAISALNN 242
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 89 PMASNNSLNNLCGLSLGSGGSDDLMNDHRPSNTNLIVNYLPQDMTDRELYALFRAIGPIN 148
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 149 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 208
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 209 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 268
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 269 NNVIPEGGSQPLSVRLAEEHGKAKAA 294
>gi|350629920|gb|EHA18293.1| hypothetical protein ASPNIDRAFT_124460 [Aspergillus niger ATCC
1015]
Length = 372
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 93/169 (55%), Gaps = 17/169 (10%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+YIRG +TTD+ L S++G I KAI+D T C+GY F A+++
Sbjct: 49 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLDTGLCKGYIF--------RAASLR 100
Query: 119 ALQD----KGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNN 174
++ K ++++ +++ TN+Y N+P+ + E DL Y V+S +I RD
Sbjct: 101 TIESNKVQKSRNSRLKDLEDKTSTNIYCTNIPIEWTEADLRHHFEPY-HVISEKISRDEK 159
Query: 175 N-TSKGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKK 221
SK VGFAR E+++ ++++ + N + G K LL++FAD+ +K
Sbjct: 160 TGVSKEVGFARFETREIAEKVLSEYHNATAKDGVK--LLLRFADTKAQK 206
>gi|351694381|gb|EHA97299.1| ELAV-like protein 3, partial [Heterocephalus glaber]
Length = 344
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 47 PGTPTGP-------EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKC 99
P P GP SKTNL + L Q+ T + ++ G I S K + DK T +
Sbjct: 17 PALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 76
Query: 100 RGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKEC 152
GYGFV++ A A+ LQ K I AR NLY++ LP +
Sbjct: 77 LGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQK 136
Query: 153 DLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
++E L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG G+ EP+
Sbjct: 137 EMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIP 196
Query: 212 VKFADSGLKKRG 223
+FA++ +K G
Sbjct: 197 GEFANNPSQKTG 208
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 283 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 342
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL + L QD TD++L + GPI + + + D T GY FVDF S + A+K
Sbjct: 105 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFASETDSQRAIK 164
Query: 119 AL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+L ++K + AR + TNLY+ NLP + L+++ KY +V ILR
Sbjct: 165 SLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILR 224
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
D +GV F R +++ + I N G +PL V+ A+
Sbjct: 225 DKLTGKPRGVAFVRFNKREEAQEAISALNNVIPEGGSQPLTVRLAE 270
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 169 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKL 227
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T K RG FV F A A+ AL +
Sbjct: 228 TGKPRGVAFVRFNKREEAQEAISALNN 254
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 53 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 112
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQ--QEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 113 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 172
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 173 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 232
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 233 NNVIPEGGSQPLSVRLAEEHGKAKAA 258
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 83 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 142
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 143 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 202
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 263 NNVIPEGGSQPLSVRLAEEHGKAKAA 288
>gi|196012894|ref|XP_002116309.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
gi|190581264|gb|EDV21342.1| hypothetical protein TRIADDRAFT_60275 [Trichoplax adhaerens]
Length = 456
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 28 SQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIIS 87
S NG T + +N N S + + L++ L +D T++DL ++ Q+GPI
Sbjct: 7 SSNGPTTSVDSNG---NDSLQITSAVKDKDAIKLFVGQLPRDCTEEDLHSLFDQFGPIYE 63
Query: 88 TKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMARQQEQDPTN-------- 139
I D+TT + +G FV + A AA A +K + + M R + P +
Sbjct: 64 LAVIKDRTTKQHKGCAFVTYCKKSSAEAAQSAFHEKKVLSGMPRPMQVKPADCENREERK 123
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFN 199
L++ L E +L+S+ + Y ++ ILR + +SKG GF + +K + IQ +
Sbjct: 124 LFVGMLGKLDDENELKSMFSPYGSIEEVTILRAIDGSSKGCGFVKFSTKSEAQVAIQNLH 183
Query: 200 GS-TLPGSKEPLLVKFADS 217
GS +PG+ L+VKFAD+
Sbjct: 184 GSRNMPGASHQLVVKFADT 202
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL+I L + TD DL N+ + YG ++S K ++K T + + +GFV +++ A A+
Sbjct: 371 NLFIYHLPPEFTDYDLHNIFAPYGNVVSAKVYINKITKQSKCFGFVSYDNASSAHHAIST 430
Query: 120 LQDKGIHAQMARQQEQDPTN 139
L ++ + + + + P +
Sbjct: 431 LNGMMVYGKKLKVEYKKPKD 450
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRI-LRDNNNTSKGVGFARLESKDKCDQMIQL 197
NL+I +LP F + DL ++ A Y VVS ++ + SK GF ++ I
Sbjct: 371 NLFIYHLPPEFTDYDLHNIFAPYGNVVSAKVYINKITKQSKCFGFVSYDNASSAHHAIST 430
Query: 198 FNGSTLPGSK 207
NG + G K
Sbjct: 431 LNGMMVYGKK 440
>gi|221104585|ref|XP_002169901.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
K NL + L Q T ++ M ++ GP+ + K I + TT + GY F+++ + A A+
Sbjct: 13 KRNLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQSLGYAFIEYPTAQLAEEAI 72
Query: 118 K-----ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
LQDK + AR E +N+Y+A LP E L SL A + ++++ +IL
Sbjct: 73 NQLDGMTLQDKKLKVSYARPSSTEIKNSNVYVAGLPSWVDEDRLLSLFAPFGSIITHKIL 132
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D + S+GVGF R K ++ I+ G LP S L+VK A
Sbjct: 133 TDAASKSRGVGFVRYSLKSDAEKAIESMAGKVLPDSTTALIVKLA 177
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 53 PEQLSKTN-------LYIRGLTQDTTDKDLINMCSQYGPIISTKAILD--KTTNKCRGYG 103
P+Q+ + N +Y+ GL ++ L + + +G I++ K I D K C+GYG
Sbjct: 202 PKQIVQYNPMSLSNPVYVYGLQPHHSELTLYELFAPFGGILNVKLIRDNAKPEKPCKGYG 261
Query: 104 FVDFESGGYALAAVKALQD 122
FV+F ALAA+ + +
Sbjct: 262 FVNFRKQDEALAAIATMHN 280
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 83 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 142
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 143 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 202
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 263 NNVIPEGGSQPLSVRLAEEHGKAKAA 288
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 85 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 144
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 145 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 204
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 205 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 264
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 265 NNVIPEGGSQPLSVRLAEEHGKAKAA 290
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L + T +++ + + G + S K + DKTT + GY FV F A A+
Sbjct: 102 KTNLIVNYLPPNMTQEEVRALFTSIGEVESCKLVRDKTTGESLGYAFVKFVRPNDAEKAI 161
Query: 118 KA-----LQDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
K LQ+K I +AR + NLYI LP + +LE ++ +++ RIL
Sbjct: 162 KTLNGLRLQNKTIKVSLARPSSESIKGANLYICGLPKKMTQVELEEQFSQCGKIITARIL 221
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
DN S+GV F R + + + + I+ NG S EP+ VKFA+S
Sbjct: 222 YDNKTGLSRGVAFIRFDQRCEAEMAIKKLNGHMPDNSSEPITVKFANS 269
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ +T + L + +G + + K + D TTNKC+G+GFV + AL ++++L
Sbjct: 357 IFVYNLSPETEEATLWQLFGPFGAVQTVKIVRDSTTNKCKGFGFVTMSNYEEALLSIQSL 416
>gi|221121672|ref|XP_002156905.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 7/165 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
K NL + L Q T ++ M ++ GP+ + K I + TT + GY F+++ + A A+
Sbjct: 13 KRNLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQSLGYAFIEYPTAQLAEDAI 72
Query: 118 K-----ALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
LQDK + AR E +N+Y+A LP E L SL A + ++++ +IL
Sbjct: 73 NQLDGMTLQDKKLKVSYARPSSTEIKNSNVYVAGLPSWVDEDRLLSLFAPFGSIITHKIL 132
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D + S+GVGF R K ++ I+ G LP S L+VK A
Sbjct: 133 TDAASKSRGVGFVRYSLKSDAEKAIESMAGKVLPDSTTALIVKLA 177
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 53 PEQLSKTN-------LYIRGLTQDTTDKDLINMCSQYGPIISTKAILD--KTTNKCRGYG 103
P+Q+ + N +Y+ GL ++ L + + +G I++ K I D K C+GYG
Sbjct: 202 PKQIVQYNPMSLSNPVYVYGLQPHHSELTLYELFAPFGGILNVKLIRDNAKPEKPCKGYG 261
Query: 104 FVDFESGGYALAAVKALQD 122
FV+F ALAA+ + +
Sbjct: 262 FVNFRKQDEALAAIATMHN 280
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DLI + S+YG I S ++ K R +GFV+FES A AV+
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 120 LQDKGIH--------AQMARQQEQDPT-----------------NLYIANLPLNFKECDL 154
L K I+ AQ ++E D NLY+ NL + L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 421 RELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISG--KPLYVAF 478
Query: 215 A 215
A
Sbjct: 479 A 479
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
L T+LY+ L + TD L + SQ G ++S + D + + GY +V++ + A
Sbjct: 119 LPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAAR 178
Query: 116 AVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++AL ++ + R +DP+ N++I NL L + + ++S
Sbjct: 179 AMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILS 238
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
++ D+ SKG GF + E ++ ++ NG
Sbjct: 239 CKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNG 272
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 126 HAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARL 185
HA A QQ T+LY+ +L N + L L ++ VVS R+ RD N+ + +G+A +
Sbjct: 110 HAGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRD-VNSRRSLGYAYV 168
Query: 186 ESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIY 232
+ D + + P + +P+ V +++ R +G+ NI+
Sbjct: 169 NYSNPMDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSA--NIF 213
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 174
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 175 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 234
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD +GV F R +++ + I N G +PL V+ A+ K + A
Sbjct: 235 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 290
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 181 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 239
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 240 TGRPRGVAFVRYNKREEAQEAISALNN 266
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 31 GGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKA 90
GG P T Q + P T ++ S TNL I L Q+ TD++L N+ S G I + K
Sbjct: 160 GGYAPDT----QESACP-TSNSEDRTSATNLIINYLPQNMTDRELFNLFSSCGSINTCKI 214
Query: 91 ILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQ--QEQDPTNLYIA 143
+ D T GYGFVD+ + AA+ +++K + AR Q TNLY+
Sbjct: 215 MRDYKTGYSFGYGFVDYNDETDSEAAIHKFNGLLVRNKRLKVSYARPGGQSIKDTNLYVI 274
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGST 202
NL N + L+ + + + +V ILRD +GV F R +++ + I N +
Sbjct: 275 NLSRNINDDQLDRIFSPFGLIVQRNILRDKLTGRPRGVAFVRYNKREEAQEAIMALNNTV 334
Query: 203 LPGSKEPLLVKFADSGLKKRGA 224
G+ P+ V+ A+ K + A
Sbjct: 335 PEGASSPIWVRLAEEHGKAKAA 356
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 83 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 142
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 143 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 202
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY ++V ILRD +GV F R +++ + I
Sbjct: 203 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 262
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 263 NNVIPEGGSQPLSVRLAEEHGKAKAA 288
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 35 PITTNNVQHN------GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPII 86
P+ +NN +N GS G+ + S TNL + L QD TD++L + GPI
Sbjct: 61 PMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 120
Query: 87 STKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTN 139
+ + + D T GY FVDF S + A+K L ++K + AR + TN
Sbjct: 121 TCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTN 180
Query: 140 LYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLF 198
LY+ NLP + L+++ KY +V ILRD +GV F R +++ + I
Sbjct: 181 LYVTNLPRTITDDQLDTIFGKYGPIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 240
Query: 199 NGSTLPGSKEPLLVKFADSGLKKRGA 224
N G +PL V+ A+ K + A
Sbjct: 241 NNVIPEGGSQPLSVRLAEEHGKAKAA 266
>gi|93115150|gb|ABE98247.1| ELAV-like [Oreochromis mossambicus]
Length = 283
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 28/224 (12%)
Query: 83 GPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ-- 135
G + S K I DK GYGFV+F + A A+ L Q K I AR
Sbjct: 3 GEVESAKLIRDKVAGHSLGYGFVNFVNASDAERAISTLNGLRLQSKTIKVSFARPSSDAI 62
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQM 194
NLYI+ LP + D+E + + Y ++++R+L D + S+GV F R + + + D
Sbjct: 63 KDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEADDA 122
Query: 195 IQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYE 254
++ NG T PGS EP+ VKF A PN R +++ S
Sbjct: 123 VKHLNGHTPPGSAEPITVKF-----------AANPNQARNSQMMSQMYHGQSRRCGGPVH 171
Query: 255 HPMTPIPATIQYQRFTAGPGGTGHIPAGYTPWVPTQYVMPAPHM 298
H Q QRF P T H+ G P +++ H+
Sbjct: 172 H---------QAQRFRFSPMSTDHMSGGGGPRELILWLVVHLHL 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + + +D+ +M S YG II+++ ++D+ + RG F+ F+ A
Sbjct: 60 DAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASGLSRGVAFIRFDKRAEA 119
Query: 114 LAAVKAL 120
AVK L
Sbjct: 120 DDAVKHL 126
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
Q+ + L M +G +++ K I D TNKC+G+GFV + A A+ +L
Sbjct: 210 QEADEAMLWQMFGPFGAVLNVKVIRDFNTNKCKGFGFVTMANYEEAAMAIHSL 262
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT--------NKCRGYGFVDFE 108
+KTNL + L Q+ + +L ++ S G + S K I DK + GYGFV++
Sbjct: 57 AKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGNPYHKNQSHSLGYGFVNYV 116
Query: 109 SGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKY 161
+ A A+ L Q K I AR NLYI+ LP + D+E + +Y
Sbjct: 117 NASDAERAINTLNGLRLQSKTIKVSFARPSSDGIKDANLYISGLPKTMTQKDVEDMFTRY 176
Query: 162 VTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
++++R+L D + S+GV F R + + + + I+ NG PG+ EP+ VKFA S
Sbjct: 177 GRIINSRVLVDQASGLSRGVAFIRFDKRAEAEDAIKDLNGQKPPGASEPITVKFAAS 233
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ NLYI GL + T KD+ +M ++YG II+++ ++D+ + RG F+ F+ A
Sbjct: 150 IKDANLYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASGLSRGVAFIRFDKRAEAED 209
Query: 116 AVKAL 120
A+K L
Sbjct: 210 AIKDL 214
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 293 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 352
>gi|360043584|emb|CCD81130.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 682
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA-----LQDKGIHAQMARQ 132
+ S+ G + S K I DK T + GYGFV++ A A++A LQ+K I +AR
Sbjct: 9 LFSKIGKLASCKLIRDKLTGQSLGYGFVNYVDASDAERAIRALNKMRLQNKTIKVSLARP 68
Query: 133 QEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKD 189
+ NLYI LP E DLE L ++++RIL D+N SKGVGF R + +
Sbjct: 69 SCESIKGANLYICGLPKLMTESDLEKLFHPCGKIITSRILFDSNTGQSKGVGFIRFDQRH 128
Query: 190 KCDQMIQLFNGSTLPG-SKEPLLVKFAD 216
+ + IQ FNG + + PL+VKFA+
Sbjct: 129 EAELAIQQFNGYRVGSIADSPLIVKFAN 156
>gi|398392333|ref|XP_003849626.1| hypothetical protein MYCGRDRAFT_28705, partial [Zymoseptoria
tritici IPO323]
gi|339469503|gb|EGP84602.1| hypothetical protein MYCGRDRAFT_28705 [Zymoseptoria tritici IPO323]
Length = 139
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q +TN+YIRGL +TTD+ L S++G I S+K+I+D T C+G+GFV + + A
Sbjct: 2 QRGETNVYIRGLLPETTDELLEIWGSRFGDIKSSKSIIDLNTGLCKGFGFVKYHNYEDAE 61
Query: 115 AAVKALQDKGIHAQMARQQ---------EQDPTNLYIANLPLNFKECDLESLLAKYVTVV 165
++ G AR+ + TNLY++NLP + E +L +L A + V
Sbjct: 62 NCIRGFHYLGYEVSFARESFYSKLKTFADTSNTNLYVSNLPKSMNEHELANLFAPH-QVA 120
Query: 166 STRILRDNNNTSKGVGFAR 184
S+++LR +GVGFAR
Sbjct: 121 SSKVLRTKEGHGRGVGFAR 139
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DLI + S+YG I S ++ K R +GFV+FES A AV+
Sbjct: 302 NVFVKNLSESTTKEDLIKVFSEYGTITSA-VVMIGMDGKSRCFGFVNFESPDDAARAVEE 360
Query: 120 LQDKGIH--------AQMARQQEQDPT-----------------NLYIANLPLNFKECDL 154
L K I+ AQ ++E D NLY+ NL + L
Sbjct: 361 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 420
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 421 RELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISG--KPLYVAF 478
Query: 215 A 215
A
Sbjct: 479 A 479
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
L T+LY+ L + TD L + SQ G ++S + D + + GY +V++ + A
Sbjct: 119 LPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAAR 178
Query: 116 AVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++AL ++ + R +DP+ N++I NL L + + ++S
Sbjct: 179 AMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILS 238
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
++ D+ SKG GF + E ++ ++ NG
Sbjct: 239 CKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNG 272
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 126 HAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARL 185
HA A QQ T+LY+ +L N + L L ++ VVS R+ RD N+ + +G+A +
Sbjct: 110 HAGGAAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRD-VNSRRSLGYAYV 168
Query: 186 ESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIY 232
+ D + + P + +P+ V +++ R +G+ NI+
Sbjct: 169 NYSNPMDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSA--NIF 213
>gi|410907065|ref|XP_003967012.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 2-like, partial
[Takifugu rubripes]
Length = 321
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL + L Q+ ++L ++ G I S K + DK T + GYGFV++ A A+
Sbjct: 1 NLIVNYLPQNMXQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINT 60
Query: 120 L-----QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD 172
L Q K I AR NLY++ LP + +LE L ++Y ++++RIL D
Sbjct: 61 LNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD 120
Query: 173 N-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
S+GVGF R + + + ++ I+ N PG+ EP+ VKFA++
Sbjct: 121 QVTGVSRGVGFIRFDRRVEAEEAIKGLNCQKPPGATEPITVKFANN 166
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 240 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 299
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIH 126
+K+L ++ GP+ S + + D T G+GFV++ A A+ L Q+K +
Sbjct: 3 EKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDAATAISTLNGLQVQNKRLK 62
Query: 127 AQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFA 183
AR +E TNLY+ NLP N E ++ + +KY +V IL+D +GV F
Sbjct: 63 VSFARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFV 122
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
R + +++ + I +G+ G EPL VK A+ K++ A G
Sbjct: 123 RFDKREEAQEAIAQLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAG 167
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
S P+G E++ +TNLY+ L ++ T+ + + S+YG I+ + DK T RG FV
Sbjct: 64 SFARPSG-EEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFV 122
Query: 106 DFESGGYALAAVKALQ 121
F+ A A+ L
Sbjct: 123 RFDKREEAQEAIAQLH 138
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDK-----------TTNKCRGY 102
+ + +TNL + L Q+ T +L ++ S G + S K I DK + GY
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGY 74
Query: 103 GFVDFESGGYALAAVKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLE 155
GFV++ + A A+ L Q K I AR + NLYI+ LP + D+E
Sbjct: 75 GFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLYISGLPRTMTQKDVE 134
Query: 156 SLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
+ + ++++R+L D S+GV F R + + + ++ I FNG PGS EP+ VKF
Sbjct: 135 DMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKF 194
Query: 215 A 215
A
Sbjct: 195 A 195
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
+++ L QD + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 257 IFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 316
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G + +KTNL + L Q+ + ++L ++ S G + S K I DK GYGFV++ +
Sbjct: 28 GEGKDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAGHSLGYGFVNYVTPS 87
Query: 112 YALAAVKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTV 164
A A+ LQ K I AR NLYI+ LP + + D+E + +++ +
Sbjct: 88 DAERAINTLNGLRLQSKNIKVSYARPSSDTIKDANLYISGLPKSMTQKDVEDMFSRFGRI 147
Query: 165 VSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+++R+L D S+GV F R + + + + + NG G EP+ VKFA
Sbjct: 148 INSRVLVDQATGASRGVAFIRFDKRAEAEDAVNNLNGQKPSGVVEPITVKFA 199
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L Q+ + L M +G + + K I D TTNKC+G+GFV ++E A+A++
Sbjct: 261 IFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFTTNKCKGFGFVTMSNYEDAAMAIASL 320
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 26/182 (14%)
Query: 49 TPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFE 108
T T ++L TNLY++ L++D T NM S +G IIS I+ K RG+GFVDFE
Sbjct: 189 TATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISA-VIMQDHNGKSRGFGFVDFE 247
Query: 109 SGGYALAAVKAL---------------QDKGIHAQMARQQEQD----------PTNLYIA 143
S A AV AL Q K ++ + + +D +NLY+
Sbjct: 248 SPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVK 307
Query: 144 NLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
NL L L+ L + +VS +++R +N S+G GF S ++ + + NG+
Sbjct: 308 NLALCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVF 367
Query: 204 PG 205
G
Sbjct: 368 QG 369
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NLY++ L L ++ S++G I+S K + + K +GYGFV F+S ALAA A
Sbjct: 108 NLYVKNLDASIDSAGLQSLFSKFGTILSCKVV--EEHGKSKGYGFVQFDSEDSALAARTA 165
Query: 120 LQDKGIH------AQMARQQEQDP---------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D + ++ ++ E+ TNLY+ NL + + ++ + + +
Sbjct: 166 LHDTMLKEKKLYVSRFVKKSERTTATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEI 225
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+S I++D+N S+G GF ES + + + NG L
Sbjct: 226 ISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDALNGYQL 264
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+ +LY+ L + T+ +L + S GPI + T + YG+V+F A A+
Sbjct: 18 RLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKAL 77
Query: 118 KALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTR 168
L + ++ R +++P NLY+ NL + L+SL +K+ T++S +
Sbjct: 78 SNLNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDASIDSAGLQSLFSKFGTILSCK 137
Query: 169 ILRDNNNTSKGVGFARLESKD 189
++ ++ SKG GF + +S+D
Sbjct: 138 VVEEHGK-SKGYGFVQFDSED 157
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
+QH T E+ +NLY++ L + L + S G I+S K ++ R
Sbjct: 284 LQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAK-VMRYDNGASR 342
Query: 101 GYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR 131
G+GFV F S A A+ AL Q K ++ MA+
Sbjct: 343 GFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMAQ 378
>gi|281211191|gb|EFA85357.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 515
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQY-GPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
L++ + + + +L +M + Y G I I +K TN+ +G FV S A A++
Sbjct: 5 LFVGQIPKSFNEDNLKSMFADYEGSIQEISVIRNKQTNEPQGCAFVTLSSKDDAEKAIQT 64
Query: 120 LQD--------KGIHAQMA-RQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L + + A +QE+ T L++ LP ++E D+++L A Y V +L
Sbjct: 65 LHSSKKFPGVSNSLQVKYADSEQEKQSTKLFVGMLPRTYQEDDIKTLFADYGEVEDICLL 124
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
R NNN SKG GF R ++++ C I NG LP S L+VKFAD+
Sbjct: 125 RGNNNESKGCGFIRFQNRESCLSAISALNGINLPPSPNNLVVKFADT 171
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+NL++ + D D+ N+ S YG ++S+K DK+T +G+GFV +++ A +A+
Sbjct: 375 SNLFVYNIPNYYNDSDMFNLFSPYGHVVSSKVYTDKSTGLSKGFGFVSYDNSIAANSAIA 434
Query: 119 ALQDKGIHAQMAR 131
L ++ R
Sbjct: 435 NLNGTTMNVNRGR 447
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 131 RQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLES 187
+QQ+ P +NL++ N+P + + D+ +L + Y VVS+++ D + SKG GF ++
Sbjct: 366 QQQQSGPAGSNLFVYNIPNYYNDSDMFNLFSPYGHVVSSKVYTDKSTGLSKGFGFVSYDN 425
Query: 188 KDKCDQMIQLFNGSTL 203
+ I NG+T+
Sbjct: 426 SIAANSAIANLNGTTM 441
>gi|303286617|ref|XP_003062598.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456115|gb|EEH53417.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 380
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
Q +N+Y++ L +D + L ++ +G + S I D +TN RG+GFV F+ A
Sbjct: 112 HQQQHSNVYVKNLAEDVDELTLKSVFDAFGVVESCCVIRDVSTNTSRGFGFVKFDGVQSA 171
Query: 114 LAAVKALQDKGIHA-----QMARQQEQDPT----------NLYIANLPLNFKECDLESLL 158
+A+K + K + + A T N+Y+ LP + E +L +
Sbjct: 172 ESAIKEMHGKSVRGRTLEVKFANSDSSATTAAAGIGTPSDNIYVKGLPPRWTEVELRAFF 231
Query: 159 AKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS- 217
+ ++ R+L + T+ G R S ++ + NG G PL+++FADS
Sbjct: 232 KVFGAIIECRLLHASGTTTAGA-LIRFASAEQAASAVVTANGRVPAGGAVPLVIRFADSH 290
Query: 218 GLKKRGAGAGGPN 230
G KRGA +G N
Sbjct: 291 GKAKRGANSGNSN 303
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 108 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 167
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 168 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 227
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
LRD +GV F R +++ + I G +PL V+ A+ K + A
Sbjct: 228 LRDKLTGRPRGVAFVRYNKREEAQEAISALKNVIPEGGSQPLSVRLAEEHGKAKAA 283
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 174 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 232
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL++
Sbjct: 233 TGRPRGVAFVRYNKREEAQEAISALKN 259
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 14/202 (6%)
Query: 49 TPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFE 108
T +G +TNL + L + D L + +G + S + I +K + + GYGFV ++
Sbjct: 106 TYSGEGATDRTNLIVNYLPNEIDDMGLRELFQDFGQVESARVIREKGSGRSLGYGFVKYK 165
Query: 109 SGGYALAAV-----KALQDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKY 161
A +A+ + K I +AR +E T LY+ANLP +F + ++ L A +
Sbjct: 166 DPQSADSAILTRNGHQVYGKRIKVSVARPASEEHKHTKLYVANLPHHFTKAEVIQLFAPH 225
Query: 162 VTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS--- 217
++ R+L + N+ +G+ F + ++ + I+ + + + G PL+VK AD
Sbjct: 226 GRIIECRLLMEANSGRFRGIAFVQYNTRQEAAAAIRSLHDTPMEGVPRPLIVKLADDKGD 285
Query: 218 ---GLKKRGAGAGGPNIYRGPG 236
G +++G G+GG RG G
Sbjct: 286 HSRGWQQQGTGSGGYGPMRGTG 307
>gi|198468704|ref|XP_001354795.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
gi|198146532|gb|EAL31850.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
Length = 496
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT----- 95
V NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 149 VPQNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYID 203
Query: 96 --------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNL 140
+ GYGFV++ A AV L Q+K I AR NL
Sbjct: 204 PLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANL 263
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLF 198
Y++ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I
Sbjct: 264 YVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIAL 323
Query: 199 NGSTLPGSKEPLLVKFADS 217
NG+T +P++VKF+++
Sbjct: 324 NGTTPSSCTDPIVVKFSNT 342
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 417 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 476
>gi|195165322|ref|XP_002023488.1| GL20165 [Drosophila persimilis]
gi|194105593|gb|EDW27636.1| GL20165 [Drosophila persimilis]
Length = 496
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 27/199 (13%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT----- 95
V NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 149 VPQNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYID 203
Query: 96 --------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNL 140
+ GYGFV++ A AV L Q+K I AR NL
Sbjct: 204 PLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANL 263
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLF 198
Y++ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I
Sbjct: 264 YVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIAL 323
Query: 199 NGSTLPGSKEPLLVKFADS 217
NG+T +P++VKF+++
Sbjct: 324 NGTTPSSCTDPIVVKFSNT 342
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 417 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 476
>gi|432098352|gb|ELK28152.1| RNA-binding motif, single-stranded-interacting protein 1 [Myotis
davidii]
Length = 255
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 151 ECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG---STLPGSK 207
E +LE++L + V+STRILRD++ TS+GVGFAR+ES +KC+ +I FNG T PG
Sbjct: 3 EQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVS 62
Query: 208 ---EPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRD 245
EPLL KFAD G KKR PN Y G R W R+
Sbjct: 63 APTEPLLCKFADGGQKKR----QNPNKYIPNG---RPWHRE 96
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L + T +++ + S G + S K + DKTT + GY FV + + A A
Sbjct: 51 NKTNLIVNYLPPNMTQEEVRALFSSIGVVESCKLVRDKTTGESLGYSFVKYLNYPDAEKA 110
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
++ LQ+K I +AR + NLYI LP + +LE+L ++ +++ RI
Sbjct: 111 IRTLNGLRLQNKTIKVSLARPSSEAIKGANLYICGLPKKMTQMELENLFSQCGKIITARI 170
Query: 170 LRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
L DN S+GV F R + + + I+ N S EP++VKFA+S
Sbjct: 171 LYDNKTGLSRGVAFIRFDQRSEAQLAIKKLNSYQPENSTEPIIVKFANS 219
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T D L + +G + + K I D TNKC+G+GFV + AL A+++L
Sbjct: 305 IFVYNLAPETDDATLWQLFGPFGAVQTVKIIRDTATNKCKGFGFVTMSNYEEALLAIQSL 364
>gi|358336031|dbj|GAA54602.1| RNA-binding motif single-stranded-interacting protein 3, partial
[Clonorchis sinensis]
Length = 938
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 11/180 (6%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
T P SKTNLYI GL + TD + ++ S KA++ + C+GYGF+D S
Sbjct: 197 TKPMITSKTNLYISGLNETDTDDTVRSLVENIVQPKSCKAMI--SNGICKGYGFIDCASE 254
Query: 111 GYALAAVK------ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTV 164
A A L + + + A + E+D N+Y+ +LPL+F + LE+L K+ V
Sbjct: 255 EDAEKAKNHIIEQAKLTGRKLLVKFAHENEKDVHNVYVRHLPLDFTKEKLEALFQKFGQV 314
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGS--TLPGSKEPLLVKFADSGLKKR 222
S ++L +N + G+GF R ++ ++ I+ N + L + P++ K AD +R
Sbjct: 315 TSVKLL-ENEDRLTGIGFVRYALAEQAEKAIEQLNAAKLVLGDNTAPVMCKLADKANTRR 373
>gi|124388985|gb|ABN10621.1| elav [Drosophila recens]
Length = 401
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 78 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 123
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 124 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 183
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 184 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 243
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 244 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 279
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 354 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 398
>gi|124388947|gb|ABN10602.1| elav [Drosophila recens]
gi|124388971|gb|ABN10614.1| elav [Drosophila recens]
gi|124389005|gb|ABN10631.1| elav [Drosophila recens]
gi|124389007|gb|ABN10632.1| elav [Drosophila recens]
gi|124389009|gb|ABN10633.1| elav [Drosophila recens]
gi|124389011|gb|ABN10634.1| elav [Drosophila recens]
gi|124389013|gb|ABN10635.1| elav [Drosophila recens]
gi|124389015|gb|ABN10636.1| elav [Drosophila recens]
gi|124389017|gb|ABN10637.1| elav [Drosophila recens]
gi|124389019|gb|ABN10638.1| elav [Drosophila recens]
gi|124389021|gb|ABN10639.1| elav [Drosophila recens]
gi|124389023|gb|ABN10640.1| elav [Drosophila recens]
gi|124389025|gb|ABN10641.1| elav [Drosophila recens]
gi|124389027|gb|ABN10642.1| elav [Drosophila recens]
gi|124389029|gb|ABN10643.1| elav [Drosophila recens]
gi|124389031|gb|ABN10644.1| elav [Drosophila recens]
Length = 401
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 78 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 123
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 124 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 183
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 184 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 243
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 244 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 279
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 354 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 398
>gi|124388951|gb|ABN10604.1| elav [Drosophila recens]
Length = 400
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 77 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 122
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 123 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 182
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 183 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 242
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 243 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 278
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 353 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 397
>gi|124388979|gb|ABN10618.1| elav [Drosophila recens]
gi|124388981|gb|ABN10619.1| elav [Drosophila recens]
gi|124389003|gb|ABN10630.1| elav [Drosophila recens]
Length = 401
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 78 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 123
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 124 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 183
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 184 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 243
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 244 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 279
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 354 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 398
>gi|124388963|gb|ABN10610.1| elav [Drosophila recens]
Length = 400
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 77 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 122
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 123 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 182
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 183 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 242
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 243 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 278
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 353 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 397
>gi|124388957|gb|ABN10607.1| elav [Drosophila recens]
gi|124388977|gb|ABN10617.1| elav [Drosophila recens]
gi|124388991|gb|ABN10624.1| elav [Drosophila recens]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 80 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 125
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 126 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 185
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 186 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 245
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 246 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 281
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 356 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 400
>gi|124388959|gb|ABN10608.1| elav [Drosophila recens]
Length = 398
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 75 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 120
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 121 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 180
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 181 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 240
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 241 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 276
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 351 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 395
>gi|124389033|gb|ABN10645.1| elav [Drosophila subquinaria]
Length = 405
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 82 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 127
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 128 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 187
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 188 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 247
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 248 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 283
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 358 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 402
>gi|124388953|gb|ABN10605.1| elav [Drosophila recens]
Length = 401
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 78 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 123
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 124 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 183
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 184 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 243
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 244 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 279
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 354 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 398
>gi|124388961|gb|ABN10609.1| elav [Drosophila recens]
Length = 400
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 77 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 122
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 123 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 182
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 183 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 242
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 243 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 278
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 353 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 397
>gi|124388983|gb|ABN10620.1| elav [Drosophila recens]
gi|124388999|gb|ABN10628.1| elav [Drosophila recens]
Length = 404
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 81 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 126
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 127 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 186
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 187 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 246
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 247 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 282
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 357 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 401
>gi|124388967|gb|ABN10612.1| elav [Drosophila recens]
gi|124388993|gb|ABN10625.1| elav [Drosophila recens]
Length = 399
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 76 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 121
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 122 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 181
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 182 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 241
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 242 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 277
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 352 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 396
>gi|124388997|gb|ABN10627.1| elav [Drosophila recens]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 80 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 125
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 126 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 185
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 186 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 245
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 246 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 281
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 356 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 400
>gi|124388955|gb|ABN10606.1| elav [Drosophila recens]
gi|124388965|gb|ABN10611.1| elav [Drosophila recens]
gi|124388973|gb|ABN10615.1| elav [Drosophila recens]
Length = 397
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 74 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 119
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 120 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 179
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 180 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 239
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 240 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 275
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 350 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 394
>gi|124388987|gb|ABN10622.1| elav [Drosophila recens]
Length = 402
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 79 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 124
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 125 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 184
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 185 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 244
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 245 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 280
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 355 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 399
>gi|124388969|gb|ABN10613.1| elav [Drosophila recens]
gi|124388975|gb|ABN10616.1| elav [Drosophila recens]
gi|124388989|gb|ABN10623.1| elav [Drosophila recens]
gi|124389001|gb|ABN10629.1| elav [Drosophila recens]
Length = 402
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 79 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 124
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 125 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 184
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 185 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 244
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 245 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 280
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 355 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 399
>gi|124388949|gb|ABN10603.1| elav [Drosophila recens]
Length = 389
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 66 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 111
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 112 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 171
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 172 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 231
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 232 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 267
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 342 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 386
>gi|124388995|gb|ABN10626.1| elav [Drosophila recens]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 36/216 (16%)
Query: 24 SNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYG 83
SNT +GG NGS G+ ++TNL + L Q T+ ++ ++ S G
Sbjct: 80 SNTNGNSGGAQ---------NGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVG 125
Query: 84 PIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGI 125
I S K I DK+ + GYGFV++ A AV L Q+K I
Sbjct: 126 EIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTI 185
Query: 126 HAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVG 181
AR NLY++ LP + +LE++ A + ++++RIL++ N+ +KGVG
Sbjct: 186 KVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVG 245
Query: 182 FARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
F R + +++ + I NG+T +P++VKF+++
Sbjct: 246 FIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 281
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
++I L +T + L + +G + S K + D TTN+C+GYGFV
Sbjct: 356 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 400
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+++ TN+Y++ L++ TTD +L QYG I S+ ++ K R +GFV+FE+ A
Sbjct: 220 DKMKFTNVYVKNLSEATTDDELKTTFGQYGSI-SSAVVMRDGDGKSRCFGFVNFENPEDA 278
Query: 114 LAAVKALQDKGI----------------HAQMARQQEQ---------DPTNLYIANLPLN 148
AV+AL K +++R+ EQ D NLY+ NL
Sbjct: 279 ARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDT 338
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE 208
+ L L A++ T+ S +++RD + TSKG GF + + +++ NG + G +
Sbjct: 339 VTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGG--K 396
Query: 209 PLLVKFADSGLKKR 222
PL V A ++R
Sbjct: 397 PLYVALAQRKEERR 410
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L + TD L + ++ ++S + D TN GYG+V++ + A A++
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 120 LQDKGIHAQMAR---------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ +M R + NL++ NL + L + T+VS ++
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVA 166
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D+ S+G GF + +++D I+ NG L
Sbjct: 167 TDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVL 199
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
+LY+ +L N + L + VVS R+ RD NTS G G+ + D ++ +Q
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 198 FNGSTLPG 205
N S L G
Sbjct: 107 LNYSYLNG 114
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 48 GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
G+ G + NLY++ L TD+ L + +++G I S K + D + +G GFV F
Sbjct: 317 GSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD-PSGTSKGSGFVAF 375
Query: 108 ESGGYALAAV-----KALQDKGIHAQMARQQEQDPTNL 140
+ A + K + K ++ +A+++E+ L
Sbjct: 376 SAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKL 413
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+++ TN+Y++ L++ TTD +L QYG I S+ ++ K R +GFV+FE+ A
Sbjct: 220 DKMKFTNVYVKNLSEATTDDELKTTFGQYGSI-SSAVVMRDGDGKSRCFGFVNFENPEDA 278
Query: 114 LAAVKALQDKGI----------------HAQMARQQEQ---------DPTNLYIANLPLN 148
AV+AL K +++R+ EQ D NLY+ NL
Sbjct: 279 ARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDT 338
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE 208
+ L L A++ T+ S +++RD + TSKG GF + + +++ NG + G +
Sbjct: 339 VTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGG--K 396
Query: 209 PLLVKFADSGLKKR 222
PL V A ++R
Sbjct: 397 PLYVALAQRKEERR 410
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L + TD L + ++ ++S + D TN GYG+V++ + A A++
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 120 LQDKGIHAQMAR---------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ +M R + NL++ NL + L + T+VS ++
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVA 166
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D+ S+G GF + +++D I+ NG L
Sbjct: 167 TDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVL 199
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
+LY+ +L N + L + VVS R+ RD NTS G G+ + D ++ +Q
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 198 FNGSTLPG 205
N S L G
Sbjct: 107 LNYSYLNG 114
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 48 GTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF 107
G+ G + NLY++ L TD+ L + +++G I S K + D + +G GFV F
Sbjct: 317 GSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD-PSGTSKGSGFVAF 375
Query: 108 ESGGYALAAV-----KALQDKGIHAQMARQQEQDPTNL 140
+ A + K + K ++ +A+++E+ L
Sbjct: 376 SAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKL 413
>gi|194744937|ref|XP_001954949.1| GF18529 [Drosophila ananassae]
gi|190627986|gb|EDV43510.1| GF18529 [Drosophila ananassae]
Length = 417
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 14/223 (6%)
Query: 7 HRVSNATSPANTHSSSSSNTGSQNGGTHPIT-TNNVQHNGSPGTPTGPEQLSKTNLYIRG 65
+R S P +S SS GS G + T NNV G P P P ++TNL I
Sbjct: 94 NRFSVPPPPTYPNSGSSQPIGSHMGTSALATEVNNV---GQPAPPVQPS--NRTNLIINY 148
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV-----KAL 120
L QD T+ +L ++ S++G + K I D +T GYGFVDF A A + L
Sbjct: 149 LPQDMTEMELADIFSKFGHLRRHKIIRDLSTGFSFGYGFVDFMDSRQAQVAQIILDGRQL 208
Query: 121 QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTS 177
+ K + AR + +D +NLY+++LP E + L + ++ IL +
Sbjct: 209 RGKRLKVSYARPRSEDIKNSNLYVSHLPATTNESQIRELFGPHGQILDINILINKATGLP 268
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLK 220
KGV F R S+ ++ + +G G P+ VKF + +K
Sbjct: 269 KGVAFVRFCSRTSAEKAQKTLDGIVPRGGSRPIEVKFVNRQIK 311
>gi|195576197|ref|XP_002077963.1| GD23195 [Drosophila simulans]
gi|194189972|gb|EDX03548.1| GD23195 [Drosophila simulans]
Length = 464
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 13/149 (8%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L Q + ++ ++ +G + S K I DK T + GYGFV++ A A+
Sbjct: 314 KTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAI 373
Query: 118 KAL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
AL Q+K I +AR + NLY++ LP N + DLESL + Y ++++RIL
Sbjct: 374 NALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRIL 433
Query: 171 RDN------NNTSKGVGFARLESKDKCDQ 193
DN SKGVGF R + + + D+
Sbjct: 434 CDNITDEHAAGLSKGVGFIRFDQRFEADR 462
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESGGYA 113
KTNL I L Q TDK+L +M GP+ S + + D T G+GFV + E A
Sbjct: 16 DKTNLIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYGFGFVKYCKEEDASRA 75
Query: 114 LAAVKAL--QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ + L Q+K + AR D TNLY+ NLP N E +L+++ Y +V I
Sbjct: 76 IGTLNGLQVQNKRLKVSYARPAGDDIKDTNLYVTNLPKNITEQELDNIFGPYGFIVQKNI 135
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGG 228
L+D +GV F R + K++ I NG G+ E + VK A+ K++ G
Sbjct: 136 LKDKVTGMPRGVAFVRYDKKEEAQAAISNLNGVVPDGATEAIQVKIAEEHGKQKAVYFAG 195
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 20 SSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMC 79
+S G+ NG + N + S P G + + TNLY+ L ++ T+++L N+
Sbjct: 70 EDASRAIGTLNG----LQVQNKRLKVSYARPAG-DDIKDTNLYVTNLPKNITEQELDNIF 124
Query: 80 SQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
YG I+ + DK T RG FV ++ A AA+ L
Sbjct: 125 GPYGFIVQKNILKDKVTGMPRGVAFVRYDKKEEAQAAISNL 165
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 28/194 (14%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+++ TN+Y++ L++ TTD +L QYG I S+ ++ K R +GFV+FE+ A
Sbjct: 215 DKMKFTNVYVKNLSEVTTDDELKTTFGQYGSI-SSAVVMRDGDGKSRCFGFVNFENPEDA 273
Query: 114 LAAVKALQDKGI----------------HAQMARQQEQ---------DPTNLYIANLPLN 148
AV+AL K +++R+ EQ D NLY+ NL
Sbjct: 274 ARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYVKNLDDT 333
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE 208
+ L L A++ T+ S +++RD + TSKG GF + + +++ NG + G +
Sbjct: 334 VTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGG--K 391
Query: 209 PLLVKFADSGLKKR 222
PL V A ++R
Sbjct: 392 PLYVALAQRKEERR 405
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L + TD L + ++ ++S + D TN GYG+V++ + A A++
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 120 LQDKGIHAQMAR---------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ +M R + NL++ NL + L + T+VS ++
Sbjct: 102 LNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETFSGCGTIVSCKVA 161
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D+ S+G GF + +++D I+ NG L
Sbjct: 162 ADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVL 194
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQL 197
+LY+ +L N + L + VVS R+ RD NTS G G+ + + ++ +Q
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 198 FNGSTLPG 205
N STL G
Sbjct: 102 LNYSTLNG 109
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV-- 117
NLY++ L TD+ L + +++G I S K + D + +G GFV F + A +
Sbjct: 324 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD-PSGTSKGSGFVAFSAASEASRVLNE 382
Query: 118 ---KALQDKGIHAQMARQQEQDPTNL 140
K + K ++ +A+++E+ L
Sbjct: 383 MNGKMVGGKPLYVALAQRKEERRAKL 408
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
++TNL + L Q +D++ + + G + S + I DK + GYGFVD+ A A
Sbjct: 81 AQTNLIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSGYSFGYGFVDYVKPEDADKA 140
Query: 117 VKAL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
++ L Q K I ++ D NLY+A L + E L+ + Y T++ TR+
Sbjct: 141 IQQLNGHPIQHKTIKVAFSKPAGADSKNINLYVAGLNPDTSEESLKQRFSSYGTIIQTRV 200
Query: 170 LRDNN-NTSKGVGFARLESKDKCDQMIQLFNGSTLP-GSKEPLLVKFADS---------G 218
L+D N N G+GF +KD+ I+ NG+ S PL+VKFA + G
Sbjct: 201 LKDKNTNLCSGIGFVLFNTKDEAMAAIKALNGAVFSQASTSPLVVKFAKTDQKVPDSFQG 260
Query: 219 LKKRGAGAGGPNIYRG 234
+G GGP RG
Sbjct: 261 GNYQGKTGGGPMRGRG 276
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 34 HPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILD 93
HPI ++ S P G + NLY+ GL DT+++ L S YG II T+ + D
Sbjct: 147 HPIQHKTIKVAFSK--PAGADS-KNINLYVAGLNPDTSEESLKQRFSSYGTIIQTRVLKD 203
Query: 94 KTTNKCRGYGFVDFESGGYALAAVKAL 120
K TN C G GFV F + A+AA+KAL
Sbjct: 204 KNTNLCSGIGFVLFNTKDEAMAAIKAL 230
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + + D T GY FVDF S + A
Sbjct: 2 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRA 61
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 62 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 121
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
LRD +GV F R +++ + I N G +PL V+ A
Sbjct: 122 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA 168
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 68 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 126
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 127 TGRPRGVAFVRYNKREEAQEAISALNN 153
>gi|195439330|ref|XP_002067584.1| GK16120 [Drosophila willistoni]
gi|194163669|gb|EDW78570.1| GK16120 [Drosophila willistoni]
Length = 509
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 164 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 218
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 219 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 278
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LES+ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 279 SGLPKTMTQQELESIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 338
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 339 TTPSSCTDPIVVKFSNT 355
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 430 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 489
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E++S TNL + L QD TD++L + + +G I + K + D T GYGFVD+ +
Sbjct: 115 ERVSSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADT 174
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ L ++K + AR Q TNLY+ NLP N + L + + +V
Sbjct: 175 EEAIDKLNGLYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNIDDDMLTRTFSPFGQIVQ 234
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + N + G +P+ V+ A+ K + A
Sbjct: 235 RNILRDKLTGRPRGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLAEEHGKAKAA 293
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E++S TNL + L QD TD++L + + +G I + K + D T GYGFVD+ +
Sbjct: 115 ERVSSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTGYSFGYGFVDYRTEADT 174
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ L ++K + AR Q TNLY+ NLP N + L + + +V
Sbjct: 175 EEAIDKLNGLYVRNKRLKVSYARPGGQSIKDTNLYVINLPRNIDDDMLTRTFSPFGQIVQ 234
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
ILRD +GV F R +++ + N + G +P+ V+ A+ K + A
Sbjct: 235 RNILRDKLTGRPRGVAFVRFSKREEAQDALNTLNNTVPLGCTQPIWVRLAEEHGKAKAA 293
>gi|195048229|ref|XP_001992493.1| GH24172 [Drosophila grimshawi]
gi|193893334|gb|EDV92200.1| GH24172 [Drosophila grimshawi]
Length = 365
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 25 NTGSQN--GG--THPITTNNVQHN---------GSPGTPTGPEQLSKTNLYIRGLTQDTT 71
N GS N GG P+ +NN +N GS P S TNL + L QD T
Sbjct: 71 NGGSANSLGGLCNMPMASNNSLNNLCGLSIGSGGSDDLMNDPRN-SNTNLIVNYLPQDMT 129
Query: 72 DKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIH 126
D++L + G I + + + D T GY FVDF S + A+K L ++K +
Sbjct: 130 DRELYALFRSIGTINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLK 189
Query: 127 AQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFA 183
AR + TNLY+ NLP + L+++ KY ++V ILRD +GV F
Sbjct: 190 VSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFV 249
Query: 184 RLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
R +++ + I N G +PL V+ A+ K + A
Sbjct: 250 RYNKREEAQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAA 290
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S TNL + L QD TD++L + GPI + + D T GY FVDF S + A
Sbjct: 13 SNTNLIVNYLPQDXTDRELYALFRAIGPINTCRIXRDYKTGYSFGYAFVDFTSEXDSQRA 72
Query: 117 VKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+K L ++K + AR + TNLY+ NLP + L+++ KY ++V I
Sbjct: 73 IKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNI 132
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
LRD +GV F R +++ + I N G +PL V+ A+
Sbjct: 133 LRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLAEE 181
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 36 ITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT 95
IT N + S P G E + TNLY+ L + TD L + +YG I+ + DK
Sbjct: 79 ITVRNKRLKVSYARPGG-ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 137
Query: 96 TNKCRGYGFVDFESGGYALAAVKALQD 122
T + RG FV + A A+ AL +
Sbjct: 138 TGRPRGVAFVRYNKREEAQEAISALNN 164
>gi|195130285|ref|XP_002009582.1| GI15436 [Drosophila mojavensis]
gi|193908032|gb|EDW06899.1| GI15436 [Drosophila mojavensis]
Length = 475
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 130 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 184
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 185 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 244
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 245 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 304
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 305 TTPSSCTDPIVVKFSNT 321
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 396 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 455
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 145 QNGSNGSSE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 199
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 200 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 259
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 260 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 319
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 320 TTPSSCTDPIVVKFSNT 336
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 411 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 470
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 134 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 188
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 189 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 248
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 249 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 308
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 309 TTPSSCTDPIVVKFSNT 325
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 400 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 459
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 133 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 187
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 188 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 247
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 248 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 307
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 308 TTPSSCTDPIVVKFSNT 324
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 399 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 458
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 19 HSSSSSNTGSQNGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINM 78
+++ ++ +GSQNG NGS T +TNL + L Q T+ ++ ++
Sbjct: 128 NTNGNAGSGSQNG-----------SNGSTET--------RTNLIVNYLPQTMTEDEIRSL 168
Query: 79 CSQYGPIISTKAILDKT-------------TNKCRGYGFVDFESGGYALAAVKAL----- 120
S G I S K I DK+ + GYGFV++ A AV L
Sbjct: 169 FSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRL 228
Query: 121 QDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNT 176
Q+K I AR NLY++ LP + +LE++ A + ++++RIL++ N+
Sbjct: 229 QNKTIKVSFARPSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQ 288
Query: 177 SKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADS 217
+KGVGF R + +++ + I NG+T +P++VKF+++
Sbjct: 289 TKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIVVKFSNT 329
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 46/270 (17%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KC 99
++ NGSP TN+Y++ L++ T+D+DL + S YG I T AI+ K N K
Sbjct: 203 IEANGSP---------KFTNVYVKNLSETTSDEDLKKIFSSYGAI--TSAIVMKDQNGKS 251
Query: 100 RGYGFVDFESGGYALAAVKAL---------------QDKG-----IHAQM-----ARQQE 134
RG+GFV+F+S A AAV+ L Q KG + A+ +R ++
Sbjct: 252 RGFGFVNFQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYEK 311
Query: 135 QDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQM 194
NLY+ NL E L+ L +++ ++ S +++ D SKG GF + ++ +
Sbjct: 312 MKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRA 371
Query: 195 IQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYE 254
+ NG + K+PL V A ++ + ++++ G + S L
Sbjct: 372 LSEMNGKMI--GKKPLYVAIAQRREERMAR-------LQAHFSQIQAPGLPTLPSGLPGY 422
Query: 255 HPMTPIPATIQYQRFTAGPGGTGHIPAGYT 284
HP TP A Q PG PAGY+
Sbjct: 423 HPGTPRLAPHQLYFGQGTPGMMPPQPAGYS 452
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + +GP++S K +D + +GYGF+ FE+ A +A+
Sbjct: 122 NVFIKNLDTKIDNKALYETFASFGPVLSCKVAVD-NNGQSKGYGFIQFENEEDAQSAINR 180
Query: 120 LQ-----DKGIHA-QMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVS 166
L D+ ++ R+ E+ TN+Y+ NL + DL+ + + Y + S
Sbjct: 181 LNGMLVNDREVYVGPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKIFSSYGAITS 240
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+++D N S+G GF +S D ++ NG T
Sbjct: 241 AIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLNGMTF 277
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q +LY+ L + + L ++ SQ P++ST+ D+ GY +V+F + A
Sbjct: 29 QFPNRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAA 88
Query: 115 AAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A++ L ++ + R +DPT N++I NL L A + V+
Sbjct: 89 KAMEVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVL 148
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
S ++ DNN SKG GF + E+++ I NG
Sbjct: 149 SCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNG 183
>gi|195402031|ref|XP_002059614.1| embryonic lethal, abnormal vision [Drosophila virilis]
gi|194147321|gb|EDW63036.1| embryonic lethal, abnormal vision [Drosophila virilis]
Length = 516
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 171 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 225
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 226 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 285
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 286 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 345
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 346 TTPSSCTDPIVVKFSNT 362
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 437 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 496
>gi|357617939|gb|EHJ71078.1| putative RNA-binding protein [Danaus plexippus]
Length = 397
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 37/206 (17%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT----- 96
Q NGS G E SKTNL I L Q T +++ ++ S G + S K I +K
Sbjct: 8 QQNGS-----GEE--SKTNLIINYLPQSMTQEEIRSLFSSIGEVESCKLIRNKGAAFPDA 60
Query: 97 --------NKCRGYGFVDF---ESGGYALAAVKAL--QDKGIHAQMARQQEQ--DPTNLY 141
+ GY FV++ E A+A + L Q+K I AR + NLY
Sbjct: 61 LNHALHGGGQSLGYAFVNYHRPEDAEKAIATLNGLRLQNKTIKVSYARPSSEAIKGANLY 120
Query: 142 IANLPLNFKECDLESLLAKYVTVVSTRILRDNNN----------TSKGVGFARLESKDKC 191
++ LP + +LE L + Y ++++RIL +N+ SKGVGF R + + +
Sbjct: 121 VSGLPKTMTQIELERLFSPYGRIITSRILCENSGGRPFTGGEQGLSKGVGFIRFDQRVEA 180
Query: 192 DQMIQLFNGSTLPGSKEPLLVKFADS 217
++ IQ NG+ G+ EP+ VKFA++
Sbjct: 181 ERAIQELNGTVPKGATEPITVKFANN 206
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S+ +++ L +T + L + +G + S K I D TNKC+GYGF+ + A+ A
Sbjct: 268 SEWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGYGFITMTNYDEAVVA 327
Query: 117 VKAL 120
+++L
Sbjct: 328 IQSL 331
>gi|195042014|ref|XP_001991348.1| GH12602 [Drosophila grimshawi]
gi|193901106|gb|EDV99972.1| GH12602 [Drosophila grimshawi]
Length = 511
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 166 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 220
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 221 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 280
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 281 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 340
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 341 TTPSSCTDPIVVKFSNT 357
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 432 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 491
>gi|156536405|gb|ABU80357.1| embryonic lethal abnormal vision [Drosophila montana]
Length = 346
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 108 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 162
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 163 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 222
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 223 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 282
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 283 TTPSSCTDPIVVKFSNT 299
>gi|156536403|gb|ABU80356.1| embryonic lethal abnormal vision [Drosophila littoralis]
Length = 334
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 96 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 150
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 151 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 210
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 211 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 270
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 271 TTPSSCTDPIVVKFSNT 287
>gi|57231478|gb|AAW47452.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 96 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 150
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 151 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 210
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 211 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 270
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 271 TTPSSCTDPIVVKFSNT 287
>gi|57231504|gb|AAW47465.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 96 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 150
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 151 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 210
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 211 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 270
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 271 TTPSSCTDPIVVKFSNT 287
>gi|57231496|gb|AAW47461.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 333
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 95 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 149
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 150 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 209
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 210 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 269
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 270 TTPSSCTDPIVVKFSNT 286
>gi|57231470|gb|AAW47448.1| embryonic lethal abnormal vision protein [Drosophila virilis]
Length = 345
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 107 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 161
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 162 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 221
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 222 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 281
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 282 TTPSSCTDPIVVKFSNT 298
>gi|57231538|gb|AAW47482.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 340
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 102 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 156
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 157 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 216
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 217 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 276
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 277 TTPSSCTDPIVVKFSNT 293
>gi|57231546|gb|AAW47486.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 326
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 88 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 142
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 143 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 202
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 203 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 262
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 263 TTPSSCTDPIVVKFSNT 279
>gi|57231572|gb|AAW47499.1| embryonic lethal abnormal vision protein [Drosophila ezoana]
Length = 343
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 105 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 159
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 160 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 219
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 220 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 279
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 280 TTPSSCTDPIVVKFSNT 296
>gi|57231474|gb|AAW47450.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231476|gb|AAW47451.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231480|gb|AAW47453.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231484|gb|AAW47455.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231486|gb|AAW47456.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231488|gb|AAW47457.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231490|gb|AAW47458.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231492|gb|AAW47459.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231494|gb|AAW47460.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231498|gb|AAW47462.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231500|gb|AAW47463.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231502|gb|AAW47464.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231506|gb|AAW47466.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231508|gb|AAW47467.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231510|gb|AAW47468.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231514|gb|AAW47470.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231516|gb|AAW47471.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231518|gb|AAW47472.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231520|gb|AAW47473.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231522|gb|AAW47474.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231524|gb|AAW47475.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231526|gb|AAW47476.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231530|gb|AAW47478.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231532|gb|AAW47479.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231534|gb|AAW47480.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231540|gb|AAW47483.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231542|gb|AAW47484.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231544|gb|AAW47485.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231548|gb|AAW47487.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231550|gb|AAW47488.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231552|gb|AAW47489.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231554|gb|AAW47490.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231556|gb|AAW47491.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231560|gb|AAW47493.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231562|gb|AAW47494.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231564|gb|AAW47495.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231568|gb|AAW47497.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 337
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 99 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 153
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 154 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 213
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 214 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 273
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 274 TTPSSCTDPIVVKFSNT 290
>gi|57231472|gb|AAW47449.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231482|gb|AAW47454.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231512|gb|AAW47469.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231528|gb|AAW47477.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231536|gb|AAW47481.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231558|gb|AAW47492.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231566|gb|AAW47496.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231570|gb|AAW47498.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 338
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 100 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 154
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 155 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 214
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 215 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 274
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 275 TTPSSCTDPIVVKFSNT 291
>gi|47219575|emb|CAG02281.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 32/193 (16%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNL + L Q+ T ++L ++ G I S K + DK T + GYGFV++ A A
Sbjct: 4 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKA 63
Query: 117 VKA-----LQDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLY++ LP + +LE L ++Y ++++RI
Sbjct: 64 INTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRI 123
Query: 170 LRDN-------------------------NNTSKGVGFARLESKDKCDQMIQLFNGSTLP 204
L D S+GVGF R + + + ++ I+ N P
Sbjct: 124 LVDQVTGGSLTLSAGAPRAGRWLTVLSAPAGVSRGVGFIRFDRRVEAEEAIKGLNCQKPP 183
Query: 205 GSKEPLLVKFADS 217
G+ EP+ VKFA++
Sbjct: 184 GATEPITVKFANN 196
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 270 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASL 329
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+N+Y++ L+ TD +L M +YG I S + D + K R +GFV+FE+ A AV+
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQ 272
Query: 119 ALQ-----DKGIHAQMARQQEQDP--------------------TNLYIANLPLNFKECD 153
L DK ++ A+++ + TNLY+ NL N +
Sbjct: 273 ELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEK 332
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L L A+Y + S +++RD+N S+G GF +S + ++ + NG + GSK PL V
Sbjct: 333 LRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMV-GSK-PLYVA 390
Query: 214 FA 215
A
Sbjct: 391 LA 392
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L + D L ++ SQ G ++S + D + K GY +V++ + G A A++
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L I+ + R +DP+ N++I NL + L + ++S +I
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKI 154
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + S+G GF + E + I NG +
Sbjct: 155 ATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLI 188
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ TNLY++ L ++ D+ L + ++YG I S K + D + RG GFV F+S A
Sbjct: 312 EKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRD-SNGVSRGSGFVAFKSAEDA 370
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNL 140
A+ K + K ++ +A+++E L
Sbjct: 371 NRALTEMNGKMVGSKPLYVALAQRKEDRKAKL 402
>gi|119265|sp|P23241.1|ELAV_DROVI RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157338|gb|AAA28505.1| ELAV [Drosophila virilis]
Length = 519
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 27/197 (13%)
Query: 43 HNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT------- 95
NGS G+ ++TNL + L Q T+ ++ ++ S G I S K I DK+
Sbjct: 174 QNGSNGSTE-----TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPL 228
Query: 96 ------TNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQ--DPTNLYI 142
+ GYGFV++ A AV L Q+K I AR NLY+
Sbjct: 229 NPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYV 288
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRD--NNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ LP + +LE++ A + ++++RIL++ N+ +KGVGF R + +++ + I NG
Sbjct: 289 SGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNG 348
Query: 201 STLPGSKEPLLVKFADS 217
+T +P++VKF+++
Sbjct: 349 TTPSSCTDPIVVKFSNT 365
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
++I L +T + L + +G + S K + D TTN+C+GYGFV + A A++AL
Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+N+Y++ L+ TD +L M +YG I S + D + K R +GFV+FE+ A AV+
Sbjct: 214 SNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRD-SDGKSRCFGFVNFENADAAAQAVQ 272
Query: 119 ALQ-----DKGIHAQMARQQEQDP--------------------TNLYIANLPLNFKECD 153
L DK ++ A+++ + TNLY+ NL N +
Sbjct: 273 ELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEK 332
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L L A+Y + S +++RD+N S+G GF +S + ++ + NG + GSK PL V
Sbjct: 333 LRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMV-GSK-PLYVA 390
Query: 214 FA 215
A
Sbjct: 391 LA 392
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L + D L ++ SQ G ++S + D + K GY +V++ + G A A++
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L I+ + R +DP+ N++I NL + L + ++S +I
Sbjct: 95 LLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFGNILSCKI 154
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + S+G GF + E + I NG +
Sbjct: 155 ATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLI 188
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ TNLY++ L ++ D+ L + ++YG I S K + D + RG GFV F+S A
Sbjct: 312 EKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRD-SNGVSRGSGFVAFKSAEDA 370
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNL 140
A+ K + K ++ +A+++E L
Sbjct: 371 NRALTEMNGKMVGSKPLYVALAQRKEDRKAKL 402
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
+KTNL + L Q+ + ++L ++ S G + S K I DK GYGFV++ + A A
Sbjct: 17 AKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVNPSDAERA 76
Query: 117 VKA-----LQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ LQ K I AR NLYI+ LP + + D+E + +++ ++++R+
Sbjct: 77 ISTLNGLRLQSKNIKVSYARPSSDTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSRV 136
Query: 170 LRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L D S+GV F R + + + + I NG + EP+ VKFA
Sbjct: 137 LVDQATGVSRGVAFIRFDKRAEAEDAINNLNGQKPSEAIEPITVKFA 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+ + NLYI GL + T KD+ +M SQ+G II+++ ++D+ T RG F+ F+ A
Sbjct: 100 DTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSRVLVDQATGVSRGVAFIRFDKRAEA 159
Query: 114 LAAVKAL 120
A+ L
Sbjct: 160 EDAINNL 166
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV---DFESGGYALAAV 117
++I L Q+ + L M +G + + K I D TNKC+G+GFV ++E A+A++
Sbjct: 245 IFIYNLGQEADETILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMSNYEDAAMAIASL 304
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 25/189 (13%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN++++ L +DTTD L +M S++G I S + +K +G+GFV +E A AAV
Sbjct: 224 TNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVN 283
Query: 119 ALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKECD 153
AL + + +AR Q++ NLY+ NL E
Sbjct: 284 ALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDK 343
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
+ + A + T+ S +I+RD S+G GF S ++ + + NG T+ G +PL V
Sbjct: 344 IRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFPKPLYVA 403
Query: 214 FADSGLKKR 222
A +R
Sbjct: 404 LAQRAEDRR 412
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 47 PGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVD 106
P P+G +LY+ L + T+ L + + GP++S + D T + GY +V+
Sbjct: 40 PSFPSG-------SLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVN 92
Query: 107 FESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESL 157
F + A A+ L I + R ++DP N++I NL L
Sbjct: 93 FHAAVDAERALDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDT 152
Query: 158 LAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ + ++S +++ D N SKG GF E+++ + I NG + G +
Sbjct: 153 FSAFGNILSCKVVTDENG-SKGYGFVHYETQEAAETAIAKVNGMVINGKQ 201
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + TTD DL N +YG I S ++ K +G+GFV+FE+ A AV+
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSA-VVMKDGEGKSKGFGFVNFENADDAARAVE 273
Query: 119 AL-----QDKGIHAQMARQQEQDPT--------------------NLYIANLPLNFKECD 153
+L DK + A+++ + T NLY+ NL + +
Sbjct: 274 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 333
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ + + + TV S++++RD N TSKG GF + ++ + + +G + +PL V
Sbjct: 334 LKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI--ESKPLYVA 391
Query: 214 FADSGLKKR 222
A +R
Sbjct: 392 IAQRKEDRR 400
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
NG T +T+ G+ T Q T+LY+ L + TD L + Q G +++ +
Sbjct: 12 NGSTAAVTSAPATSGGATAT-----QFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVR 66
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NL 140
D T + GYG+V+F + A A++ L ++ + R +DP+ N+
Sbjct: 67 VCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNI 126
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
+I NL + L + + +VS ++ D++ SKG GF + +++ + I+ NG
Sbjct: 127 FIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNG 186
Query: 201 STL 203
L
Sbjct: 187 MLL 189
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ +NLY++ L +D+ L + S +G + S+K + D +G GFV F + A
Sbjct: 313 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEA 371
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNL 140
A+ K ++ K ++ +A+++E L
Sbjct: 372 TEAMSQLSGKMIESKPLYVAIAQRKEDRRVRL 403
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + TTD DL N +YG I S ++ K +G+GFV+FE+ A AV+
Sbjct: 199 TNVYVKNLAESTTDDDLKNAFGEYGKITSA-VVMKDGEGKSKGFGFVNFENADDAARAVE 257
Query: 119 AL-----QDKGIHAQMARQQEQDPT--------------------NLYIANLPLNFKECD 153
+L DK + A+++ + T NLY+ NL + +
Sbjct: 258 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 317
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ + + + TV S++++RD N TSKG GF + ++ + + +G + +PL V
Sbjct: 318 LKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI--ESKPLYVA 375
Query: 214 FADSGLKKR 222
A +R
Sbjct: 376 IAQRKEDRR 384
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q T+LY+ L + TD L + Q G +++ + D T + GYG+V+F + A
Sbjct: 16 QFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAA 75
Query: 115 AAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A++ L ++ + R +DP+ N++I NL + L + + +V
Sbjct: 76 RAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIV 135
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S ++ D++ SKG GF + +++ + I+ NG L
Sbjct: 136 SCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLL 173
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ +NLY++ L +D+ L + S +G + S+K + D +G GFV F + A
Sbjct: 297 DKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRD-PNGTSKGSGFVAFATPEEA 355
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNL 140
A+ K ++ K ++ +A+++E L
Sbjct: 356 TEAMSQLSGKMIESKPLYVAIAQRKEDRRVRL 387
>gi|226875175|gb|ACO88935.1| Elav [Octopus bimaculoides]
Length = 283
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 10/130 (7%)
Query: 98 KCR--GYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP--TNLYIANLPLN 148
KC+ GYGFV+++ A A+ L Q+K I AR + NLYI+ LP +
Sbjct: 73 KCQSLGYGFVNYKYPSDAEKAINTLNGLRLQNKTIKVSYARPSSESIKGANLYISGLPKS 132
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
F + DLE L ++ ++++RIL DNN SKGVGF R + + + ++ IQ +G+ G+
Sbjct: 133 FTQLDLEKLFSQCGFIITSRILYDNNTGLSKGVGFIRFDQRIEAERAIQKLHGTIPEGAT 192
Query: 208 EPLLVKFADS 217
EP+ VKFA+S
Sbjct: 193 EPITVKFANS 202
>gi|449684824|ref|XP_002156791.2| PREDICTED: ELAV-like protein 2-like, partial [Hydra magnipapillata]
Length = 354
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TNL + L Q+ ++++L + S G + S K I DK T GY FV+++ A A+
Sbjct: 14 RTNLIVNYLPQEMSEEELKTLFSSVGALESCKLIRDKVTKASLGYAFVNYQHPNDARKAI 73
Query: 118 KALQ-----DKGIHAQMAR--QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+LQ K I AR E NLYI+ LP L L + ++++++L
Sbjct: 74 HSLQGMKLTTKTIKVSYARPSSNEIKNANLYISGLPQTCDAIRLRELFQFFGEIITSKVL 133
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGST--LPGSKEPLLVKFAD 216
D N S+GVGF R + + + + I+ N L + +PL VKFA+
Sbjct: 134 VDENGISRGVGFVRFDKRCQAELSIEALNNKVPNLLNAIKPLAVKFAN 181
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 27 GSQNGGT-HPIT--TNNVQHNGSPGTPTGPEQLSKT--------NLYIRGLTQDTTDKDL 75
G NG T H +T TN+ +N G+ GP L+ +++ L D D L
Sbjct: 226 GVSNGNTVHNVTNGTNSTYNNALNGS--GPNNLNLVPQANVTSWCVFVYNLPSDANDLTL 283
Query: 76 INMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQ----DKGIHAQMAR 131
+ S++G I S + I D KCRGYGFV+ +AA+ L ++G Q++
Sbjct: 284 FQLFSKHGAIHSVRVITDHEK-KCRGYGFVNMLHYEDTIAAIFRLNGYCLERGKPLQVSL 342
Query: 132 QQEQDPTNLY 141
++ + +N+Y
Sbjct: 343 KRSKCMSNMY 352
>gi|312375028|gb|EFR22477.1| hypothetical protein AND_15210 [Anopheles darlingi]
Length = 295
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILD-KTTNKCRGY 102
N PG+P + TNL + L QD T++++ ++ S GPI S + + D K T G+
Sbjct: 89 NFGPGSPNH----AGTNLIVNYLPQDMTEQEMYSIFSNMGPIESCRLMRDLKQTGYSYGF 144
Query: 103 GFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLE 155
GFV++ + A A+K L ++K + AR Q D TNLYI NLP E L+
Sbjct: 145 GFVNYLTEDAAQRAIKCLNGFPIRNKRLKVSYARPQSDDIKETNLYITNLPRTINEDQLD 204
Query: 156 SLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
+ KY T+V ILRD +GV F S K + + N G +PL+V+
Sbjct: 205 IIFGKYGTIVQKNILRDKLTGQPRGVAFV---SARKRKKQYRPLNNVIPQGGTQPLIVRV 261
Query: 215 ADSGLKKRGA 224
A+ + + A
Sbjct: 262 AEDHGRAKAA 271
>gi|157108361|ref|XP_001650191.1| hypothetical protein AaeL_AAEL014999 [Aedes aegypti]
gi|108868546|gb|EAT32771.1| AAEL014999-PA, partial [Aedes aegypti]
Length = 226
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 30/136 (22%)
Query: 181 GFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVR 240
GFAR+ES++KC+Q+IQ+FNG+ L G+KEPLLVKFAD G KK+ N ++ P R
Sbjct: 1 GFARMESREKCEQIIQMFNGTQLQGAKEPLLVKFADGGSKKK-------NPFKSPDPNAR 53
Query: 241 LWGRDSADSQLAYEHPMTPIP--------------ATIQYQRFTAGPGGTGHIPAGYTPW 286
W RD A+ P+T P ++ Y RF+A G+ +P + W
Sbjct: 54 TW-RDGAEG-----IPVTYDPNLQQNGIGMNVGAHISMPYGRFSAPQVGSYAVPG--SQW 105
Query: 287 VPTQYVMPAPHMSQVE 302
VP+ Y+M P ++QV+
Sbjct: 106 VPSGYMMTQP-IAQVD 120
>gi|66821129|ref|XP_644081.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|60472201|gb|EAL70154.1| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 904
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN++++ L + D+DL N+ S+YG ++S+K ++D N GYGFV F S + AA+
Sbjct: 108 QTNVFVKHLPYEFNDEDLENLFSKYGKVLSSKVMIDPKGN-SYGYGFVRFSSPQESAAAI 166
Query: 118 KAL-----QDKGIHAQMAR-----QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+ L Q+K + +++ + NL+I LP + + L L + ++
Sbjct: 167 EELDGYQYQNKKLLCRLSNLYTNLNSKYPSNNLFIKPLPYDVTDDQLRKLFEPFGKIIEC 226
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL-PGSKEPLLVKFADSGLKK 221
+++ D+N SK GF R S+ + I NG + S PL+VK+AD+ +K
Sbjct: 227 KVMLDHNGQSKFAGFVRFSSELDASKAIDAMNGVRINKDSGYPLVVKYADTEQQK 281
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 134 EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQ 193
E+D TN+++ +LP F + DLE+L +KY V+S++++ D S G GF R S +
Sbjct: 105 ERDQTNVFVKHLPYEFNDEDLENLFSKYGKVLSSKVMIDPKGNSYGYGFVRFSSPQESAA 164
Query: 194 MIQLFNGSTLPGSKEPLLVKFAD 216
I+ +G K LL + ++
Sbjct: 165 AIEELDGYQYQNKK--LLCRLSN 185
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL++ L D L + SQ+G + S + I DK T + +GYGFV F AL K
Sbjct: 769 TNLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFYQTDEALKCQK 828
Query: 119 AL 120
+
Sbjct: 829 EM 830
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L++ T++DL + YG I S + D+T K RG+GFV+F+ A AAV+
Sbjct: 224 TNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQT-GKSRGFGFVNFQDPDSAAAAVE 282
Query: 119 ALQDKGIH-----------------AQMARQQEQD---------PTNLYIANLPLNFKEC 152
L H A++ + EQ+ NLY+ NL N +
Sbjct: 283 KLNGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNLDDNINDV 342
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
L+ L +++ ++ S +++ D+ SKG GF + ++ + ++ NG + ++PL V
Sbjct: 343 KLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEEASRALKEMNGKMI--GRKPLYV 400
Query: 213 KFADSGLKKRGAGAGGPNIYRGPGA 237
A +++ + R PGA
Sbjct: 401 AIAQRKEERKARLQAHFALVRAPGA 425
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q + +LY+ L Q+ ++ L ++ SQ ++S + D+T GYG+V+F + A
Sbjct: 41 QFANLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAA 100
Query: 115 AAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A+KAL ++ + R +DP+ N++I NL L A + TV+
Sbjct: 101 NAMKALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVL 160
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S ++ D+N SKG GF + E+++ ++ I +G L
Sbjct: 161 SCKVAVDSNGQSKGYGFVQFENEESAERAISFLDGMCL 198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK- 118
N++I+ L +K L + +G ++S K +D + + +GYGFV FE+ A A+
Sbjct: 134 NVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVD-SNGQSKGYGFVQFENEESAERAISF 192
Query: 119 ----ALQDKGIHAQM-ARQQEQDPTN-------LYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ RQQE+ TN +Y+ NL DLE + Y T+ S
Sbjct: 193 LDGMCLNDKQVYVGFFVRQQERTRTNGSPKFTNVYVKNLSETITNEDLEKVFGVYGTITS 252
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGST 202
+++D S+G GF + D ++ NG+T
Sbjct: 253 ALVMKDQTGKSRGFGFVNFQDPDSAAAAVEKLNGTT 288
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+L NLY++ L + D L + S++G I S K +LD +G GFV F + A
Sbjct: 323 ERLKAANLYLKNLDDNINDVKLKELFSEFGSITSCKVMLDH-QGVSKGSGFVAFSTPEEA 381
Query: 114 LAAVKALQDKGI-----HAQMARQQEQDPTNL 140
A+K + K I + +A+++E+ L
Sbjct: 382 SRALKEMNGKMIGRKPLYVAIAQRKEERKARL 413
>gi|298710320|emb|CBJ31940.1| Xel-1 protein [Ectocarpus siliculosus]
Length = 573
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESGGYA 113
S+ NL I L T+ +L NM + +G + K + D++T K GYGFV F E+ A
Sbjct: 106 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAA 165
Query: 114 LAAVK--ALQDKGIHAQMARQQEQDPTN--LYIANLPLNFKECDLESLLAKYVTVVSTRI 169
A+ A+ K I +AR +D N LY+ NLP +F + + + + T+V +
Sbjct: 166 TLAINGMAIDRKRIKVSIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFEQCRTLVDPKT 225
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
S+ F + +++ + ++ NG LPG+K+ LLVKFA+
Sbjct: 226 -----TISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAE 267
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
N P T NN N S +G + SKTNL + L Q+ T ++L ++ G
Sbjct: 20 NTANGPTTINN---NCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIG------ 70
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNLYI 142
+ GYGFV++ A A+ L Q K I AR NLY+
Sbjct: 71 --------QSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYV 122
Query: 143 ANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGS 201
+ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ NG
Sbjct: 123 SGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQ 182
Query: 202 TLPGSKEPLLVKFADS 217
PG+ EP+ VKFA++
Sbjct: 183 KPPGATEPITVKFANN 198
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ NLY+ GL + T K+L + SQYG II+++ ++D+ T RG GF+ F+ A
Sbjct: 115 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEE 174
Query: 116 AVKALQDKG-------IHAQMARQQEQDPTNLYIANL 145
A+K L + I + A Q+P ++ L
Sbjct: 175 AIKGLNGQKPPGATEPITVKFANNPSQNPNQAILSQL 211
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L D + L M +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 272 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 331
>gi|296806555|ref|XP_002844087.1| sporulation-specific protein 5 [Arthroderma otae CBS 113480]
gi|238845389|gb|EEQ35051.1| sporulation-specific protein 5 [Arthroderma otae CBS 113480]
Length = 596
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+YIRG +TTD+ L N S++G I KAI+D T C+G+GFV F S ++
Sbjct: 276 TNVYIRGFLPETTDEMLHNYASRFGKIDRCKAIIDLETGSCKGFGFVQFFSFDACENCIR 335
Query: 119 ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TS 177
G A A+ DL + VVS +I RD S
Sbjct: 336 GFFHLGYQASFAQ---------------------DLRRHFEPF-QVVSEKISRDEKTGVS 373
Query: 178 KGVGFARLESKDKCDQMIQLF-NGSTLPGSKEPLLVKFADSGLKKR 222
K VGFAR E+++ ++++Q F N G K LL++FAD+ +K+
Sbjct: 374 KEVGFARFETREIAEKVVQQFHNIVGKDGVK--LLLRFADTKAQKQ 417
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA-LAAV 117
TNL + L D + +L + +G I K I D T YGFV+F + G A LA V
Sbjct: 29 TNLLVNYLPFDMLEGELYALFVSFGHIKHVKIIRDAETGASHCYGFVNFSAAGNANLAQV 88
Query: 118 ----KALQDKGIHAQMARQQEQDPTN--LYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
+ ++ K + AR D N +Y+ANLP+++ E + + +Y ++ +L+
Sbjct: 89 CLNGRQVRGKRLKVSPARPSSMDIRNAKVYVANLPIDYNEQKVRATFGRYGNILDLNVLK 148
Query: 172 DN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
D S+G+ F R + K D I + NG TL G PL V+ A
Sbjct: 149 DRFTGLSRGIAFVRFDLKSSADMAISVMNGYTLEGGSFPLQVRLA 193
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 28/190 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + TTD DL N +YG I S ++ K +G+GFV+FE+ A AV+
Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSA-VVMKDGDGKSKGFGFVNFENADDAARAVE 273
Query: 119 AL-----QDKGIHAQMARQQEQDPT--------------------NLYIANLPLNFKECD 153
+L DK + A+++ + T NLY+ NL + +
Sbjct: 274 SLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEK 333
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ + + + TV S +++RD N TSKG GF + ++ + + +G + +PL V
Sbjct: 334 LKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMI--ESKPLYVA 391
Query: 214 FADSGLKKRG 223
A +R
Sbjct: 392 IAQRKEDRRA 401
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 14/154 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L + K L + S +G I+S K +D ++ + +GYGFV + + A A++
Sbjct: 125 NIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 183
Query: 120 LQ-----DKGIHA-QMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ R+QE+D T N+Y+ NL + + DL++ +Y + S
Sbjct: 184 LNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITS 243
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
+++D + SKG GF E+ D + ++ NG
Sbjct: 244 AVVMKDGDGKSKGFGFVNFENADDAARAVESLNG 277
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 30 NGGTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTK 89
NG T +T+ V G+ G T+LY+ L + TD L + SQ GP++S +
Sbjct: 12 NGSTVAVTSAPVTSGGATAAGFG-----TTSLYVGDLDVNVTDSQLFDAFSQMGPVVSVR 66
Query: 90 AILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NL 140
D T + GYG+V+F + A A++ L ++ + R +DP+ N+
Sbjct: 67 VCRDLATRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNI 126
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
+I NL + L + + +VS ++ D++ SKG GF + +++ + I+ NG
Sbjct: 127 FIKNLDESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNG 186
Query: 201 STL 203
L
Sbjct: 187 MLL 189
>gi|257215878|emb|CAX83091.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK- 118
NL I + TD DL N+ S G I + + I D+ + G+GF ++E A A+
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITR 67
Query: 119 ----ALQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD 172
+ DK + +A+ Q + +NLY+ N P E DL + ++ V+ RILRD
Sbjct: 68 FNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRD 127
Query: 173 NN-NTSKGVGFARLESKDKCDQMIQLFNGSTLPGS--KEPLLVKFADSGLKKRGAGAGGP 229
++ N SKG + E+ + + + PGS + L +KF ++
Sbjct: 128 HDTNVSKGSAYVLFENSVDAEAAKRSLDAHIWPGSSDNQTLSIKFTTPPYRQSANSTKSK 187
Query: 230 NIYRGPGAEVRLWGRDSADSQLA 252
N +R P + + G D + QL+
Sbjct: 188 NNFRRPFVQQQHLGNDCFNGQLS 210
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+NLY++ T+ DL Q+G +I + + D TN +G +V FE+ A AA +
Sbjct: 93 SNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYVLFENSVDAEAAKR 152
Query: 119 AL 120
+L
Sbjct: 153 SL 154
>gi|195133248|ref|XP_002011051.1| GI16327 [Drosophila mojavensis]
gi|193907026|gb|EDW05893.1| GI16327 [Drosophila mojavensis]
Length = 716
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 16/191 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ S TNL I L QD TD++L + S G I + K + D T GYGFVD+ S +
Sbjct: 245 DRTSATNLIINYLPQDMTDRELYRLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNSEVDS 304
Query: 114 LAAVKAL-----QDKGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++K + AR Q TNLY+ NL N + L+ + + Y +V
Sbjct: 305 EEAIQKLNGFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDQLDRIFSPYGLIVQ 364
Query: 167 TRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAG 225
ILRD +GV F R E + + I+ N + G +P+ V+ A+ K + A
Sbjct: 365 RNILRDKLTGRPRGVAFVRGE---EAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQ 421
Query: 226 -----AGGPNI 231
GGP++
Sbjct: 422 FMSQIGGGPHM 432
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 29/191 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ ++ TD+DL + S YG I S ++ T K R +GFV+FES A+AAV+
Sbjct: 184 TNVYVKNFSETYTDEDLEQLFSTYGTITSA-VVMKDTDGKSRCFGFVNFESPDSAVAAVE 242
Query: 119 ALQ------DKGIHAQMA-RQQEQDP-------------------TNLYIANLPLNFKEC 152
L DK ++ A R+ E++ TNLY+ NL N +
Sbjct: 243 RLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDD 302
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
L+ L +++ T+ S +++ + N SKG GF + ++ + NG + + PL V
Sbjct: 303 KLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMI--GRRPLYV 360
Query: 213 KFADSGLKKRG 223
A +++
Sbjct: 361 AVAQRKEERKA 371
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L +K L + + +G ++S+K +D + + +GYGFV F++ A A+K
Sbjct: 93 ANVFIKNLDISIDNKTLHDTFAAFGFVLSSKVAVD-SIGQSKGYGFVQFDNEESAQNAIK 151
Query: 119 ALQ-----DKGIHA------QMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVV 165
L DK ++ Q Q + P TN+Y+ N + + DLE L + Y T+
Sbjct: 152 ELNGMLINDKKVYVGLFVNRQERAQVDGSPKFTNVYVKNFSETYTDEDLEQLFSTYGTIT 211
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
S +++D + S+ GF ES D ++ NG+T+ K
Sbjct: 212 SAVVMKDTDGKSRCFGFVNFESPDSAVAAVERLNGTTVNDDK 253
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q +LY+ L ++ + L + ++ GPI S + D+ TN+ GY +V+F + A
Sbjct: 2 QSGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDE-TNRSLGYAYVNFVNPQDAA 60
Query: 115 AAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A++ L ++ + R +DP+ N++I NL ++ L A + V+
Sbjct: 61 NAMEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFGFVL 120
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
S+++ D+ SKG GF + ++++ I+ NG + K
Sbjct: 121 SSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKK 162
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ TNLY++ L + D L + S++G I S K +L+ + +GYGFV F + A
Sbjct: 283 EKYHGTNLYVKNLDYNINDDKLKELFSEFGTITSCKVMLE-PNGRSKGYGFVAFSAPRNA 341
Query: 114 LAAVKALQDKGI 125
A+ + K I
Sbjct: 342 NRALHEMNGKMI 353
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQL 197
+LY+ +L N E L L A+ + S R+ RD N S G + + ++
Sbjct: 6 ASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEH 65
Query: 198 FNGSTLPGSKEPLLVKFADSGLKKRG 223
N + L G ++ D ++K G
Sbjct: 66 LNFTPLNGKSIRVMFSNRDPSIRKSG 91
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 35 PITTNNVQHNGSPGTPTGPE---QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAI 91
PI T+ H +P + P Q SKTNL + L Q+ T L + S G I + K
Sbjct: 93 PIVTSTPTHQSAPHSRMSPFTGGQESKTNLIVNYLPQNYTQDQLRELFSSIGDIETCKLC 152
Query: 92 LDKTTNKCRGYGFVDFESGGYALAAVK-----ALQDKGIHAQMARQQEQ--DPTNLYIAN 144
+ T GYGFV+F A AV ++Q K I AR TNLY+A
Sbjct: 153 RHRETKMSLGYGFVNFRRSSDAKRAVDSFNGLSIQTKSIKVSYARPSSNIIKNTNLYVAG 212
Query: 145 LPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTL 203
+P + ++++L + ++S RIL D + SKGV F R +++ + ++ ++ +
Sbjct: 213 IPRSITLAEIKNLFGRLGKIISARILHDKDTGLSKGVAFIRYDTRVEAERAVKHMHHFNY 272
Query: 204 PGSKEPLLVKFAD-SGLKK 221
G E L VKFA LKK
Sbjct: 273 EG--EVLTVKFAKRQSLKK 289
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAIST 157
Query: 120 -----LQDKGI---HAQMARQQE-------QDPTNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NL ++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKL 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+S ++++DNN S+G GF E ++ + + NG + G +
Sbjct: 218 LSVKVMKDNNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQ 260
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 29/190 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L D ++ L ++ SQ+G ++S K + D RG+GFV+FE A AV
Sbjct: 191 TNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKD-NNGHSRGFGFVNFEKHEEAQKAVM 249
Query: 119 ALQDKGI----------HAQMARQQE---------QDP------TNLYIANLPLNFKECD 153
+ K + ++ RQ E QD NLY+ NL + +
Sbjct: 250 DMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSIDDEK 309
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + Y + S +++ + + SKG GF S ++ + + NG + G+K PL V
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRII-GTK-PLYVA 366
Query: 214 FADSGLKKRG 223
A ++R
Sbjct: 367 LAQRKEERRA 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 10/158 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+LY+ L D T+ L GPI+S + D T + Y +++F+ A A+
Sbjct: 11 ASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALD 70
Query: 119 ALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ + I Q R ++DP N++I NL + L + + ++S ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ D + S+G GF E+ + Q I NG L K
Sbjct: 131 VCDEHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRK 167
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+ NL+++ L + K+L + S +G I+S K D + + +GYGFV +E+ A AA+
Sbjct: 122 RANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATD-SAGQSKGYGFVQYETEESAEAAI 180
Query: 118 KALQDK---------GIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
L G+H + R +E TN+YI NLP F E DL A + + S
Sbjct: 181 NGLNGMLANNRKMFVGLHMRR-RDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAV 239
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++RD + SK GF + + + ++ NG +
Sbjct: 240 VMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAI 274
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYA 113
++ TN+YI+ L + ++ DL + +G I S + D +KC +GFV+F+ +A
Sbjct: 205 EVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKC--FGFVNFKKPEFA 262
Query: 114 LAAV-----KALQDKGIHAQMARQQEQ--------------------DPTNLYIANLPLN 148
+ AV KA+ DK ++ A+++E+ + NLY+ N+
Sbjct: 263 IEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDG 322
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE 208
+ L+ L ++ V S +++ D SKG GF + + + I NG + K+
Sbjct: 323 INDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIV--GKK 380
Query: 209 PLLVKFA 215
PL V A
Sbjct: 381 PLYVGLA 387
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 48 GTPTG--PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
GTP P S +LY+ L + + L + SQ P+ + + D + GYG+V
Sbjct: 22 GTPAAVLPPLGSMASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYV 81
Query: 106 DFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLES 156
+F S A A++AL + + R +DP+ NL++ NL N +L
Sbjct: 82 NFYSRQEATRALEALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYE 141
Query: 157 LLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
+ + + ++S ++ D+ SKG GF + E+++ + I NG
Sbjct: 142 IFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAINGLNG 185
>gi|328875992|gb|EGG24356.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 770
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 11/174 (6%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN++++ L + D +L N+ +Q+G ++S K ++D N GYGFV F S + A+
Sbjct: 87 QTNVFVKYLPNEFGDSELHNLFTQFGKVMSAKVMVDPKGN-SYGYGFVRFSSPIESKLAI 145
Query: 118 KALQDKGI-HAQM--------ARQQEQDPTN-LYIANLPLNFKECDLESLLAKYVTVVST 167
+ + K + H ++ + + P+N L++ LP + L L + +V
Sbjct: 146 ETMDGKQLMHKKLLCRLSYLYSNHNSKYPSNNLFVKPLPATLTDGQLRDLFQGFGEIVEC 205
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+++ D SK GF R +++ + IQ NG+ + PL+VK+AD+ +K
Sbjct: 206 KVMVDKKGNSKLAGFVRFDNEADATKAIQAMNGAKMGADSTPLVVKYADNEHQK 259
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL++ L D L + SQYGP+ S + I+DK T + +GYGFV F++ A+ ++
Sbjct: 628 TNLFVFHLPSFVDDVYLYKLFSQYGPLQSVRVIMDKETGENKGYGFVKFQNRDDAVTSLN 687
Query: 119 ALQDKGIHAQMARQQEQDPT 138
+ + + + + +D T
Sbjct: 688 QMNGMQVGQKYLKVKFKDST 707
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 134 EQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQ 193
E+D TN+++ LP F + +L +L ++ V+S +++ D S G GF R S +
Sbjct: 84 EKDQTNVFVKYLPNEFGDSELHNLFTQFGKVMSAKVMVDPKGNSYGYGFVRFSSPIESKL 143
Query: 194 MIQLFNGSTL 203
I+ +G L
Sbjct: 144 AIETMDGKQL 153
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 138 TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKDKCDQMIQ 196
TNL++ +LP + L L ++Y + S R++ D +KG GF + +++D +
Sbjct: 628 TNLFVFHLPSFVDDVYLYKLFSQYGPLQSVRVIMDKETGENKGYGFVKFQNRDDAVTSLN 687
Query: 197 LFNGSTLPGSKEPLLVKFADS 217
NG + G K L VKF DS
Sbjct: 688 QMNGMQV-GQKY-LKVKFKDS 706
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y++ L TTD +L + YGPI S+ ++ K + +GFV+FE A AV+A
Sbjct: 204 NVYVKNLADSTTDDELKKVFEAYGPI-SSAVVMRDNEGKSKCFGFVNFEHADDAAKAVEA 262
Query: 120 LQDKGI----------------HAQMARQQEQDP---------TNLYIANLPLNFKECDL 154
L K A++ + EQ+ NLY+ NL + L
Sbjct: 263 LNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTIDDEKL 322
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
+ ++Y T+VS +++RD S+G GF S D+ + + NG + GSK PL V
Sbjct: 323 REIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMNGKMV-GSK-PLYVAL 380
Query: 215 ADSGLKKR 222
A ++R
Sbjct: 381 AQRKEERR 388
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L ++ L + SQ G ++S + D T + GY +V++ + A A++
Sbjct: 24 TSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRALE 83
Query: 119 ALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L ++ + R +DP+ N++I NL + L A + T++S ++
Sbjct: 84 LLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILSCKV 143
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + SKG GF + E ++ I+ NG L
Sbjct: 144 ATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLL 177
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ NLY++ L D+ L + S+YG I+S K + D + RG GFV F S A
Sbjct: 301 EKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRD-PQGQSRGSGFVAFSSPDEA 359
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNLYIA 143
AV K + K ++ +A+++E+ L A
Sbjct: 360 TRAVTEMNGKMVGSKPLYVALAQRKEERRNRLQAA 394
>gi|255075981|ref|XP_002501665.1| predicted protein [Micromonas sp. RCC299]
gi|226516929|gb|ACO62923.1| predicted protein [Micromonas sp. RCC299]
Length = 667
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 47 PGTPT-GPEQLSK-TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGF 104
PG+P G S+ +N+Y++ L++D + L + ++G + S I D +TN RG+GF
Sbjct: 17 PGSPAHGVSNGSQHSNVYVKNLSEDVDELTLKGVFDKFGAVESCCVIRDVSTNSSRGFGF 76
Query: 105 VDFESGGYALAAVKALQDKGIHAQM--ARQQEQDPT-------------NLYIANLPLNF 149
V F A AA+K + K I ++ + D + N+Y+ LP +
Sbjct: 77 VKFMQVHQAEAAIKEMNGKVIRGKVLEVKFANSDSSATTAASGVGTISDNIYVKGLPPLW 136
Query: 150 KECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEP 209
E +L + + T++ R+L + T+ G R S ++ + NG G + P
Sbjct: 137 TEVELRAFFKIFGTIIECRLLHASGTTTAGA-LIRFSSMEQAASAVVTANGRVPAGGQVP 195
Query: 210 LLVKFADSGLKKR 222
L+++FADS K R
Sbjct: 196 LVIRFADSHSKTR 208
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 37/265 (13%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TTD+DL + +GPI S+ ++ + K + +GFV+FE+ A+ AV+
Sbjct: 193 NVFVKNLSEITTDEDLQKLFGVFGPI-SSAVVMKEVDGKSKCFGFVNFENPEDAVKAVED 251
Query: 120 L-----QDKGIHAQMARQ-------------------QEQDPTNLYIANLPLNFKECDLE 155
L QDK ++ A++ +++ PTNLY+ NL + L+
Sbjct: 252 LHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDKSPTNLYLKNLDDGIDDEKLK 311
Query: 156 SLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+ + + V S +++RD SKG GF + D + + NG + GSK PL V A
Sbjct: 312 DMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQMNGKMI-GSK-PLYVAMA 369
Query: 216 DSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQYQRFTAGPGG 275
++R A RGP + QL Y P +P Q F
Sbjct: 370 QKK-EERKAKLEAQFASRGPVNFPPPPLYSAVGQQLLYSRPAPMVPQ--QPAGFAMVRPN 426
Query: 276 TGHIPAGYTPW-------VPTQYVM 293
G +P + P VP Q M
Sbjct: 427 VGQMPGFFPPQRQQGHARVPFQQFM 451
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q P +P + T LY+ L + + ++ Q G ++S + D T + G
Sbjct: 3 QETSPPRSP-----FASTALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLG 57
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKEC 152
Y +V++ + A A++ L ++ + R +DP+ NL++ NL +
Sbjct: 58 YAYVNYNNTQDASRAIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSIDNK 117
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
L L + Y ++S +I D +N SKG GF + +++D I+ NG+TL
Sbjct: 118 ALHDLFSPYGKILSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTL 168
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E S TNLY++ L D+ L +M S +G + S K + D + +G GFV F + A
Sbjct: 289 EDKSPTNLYLKNLDDGIDDEKLKDMFSAFGNVTSCKVMRDPLGH-SKGSGFVAFSTSDAA 347
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNL---YIANLPLNF 149
L AV K + K ++ MA+++E+ L + + P+NF
Sbjct: 348 LRAVAQMNGKMIGSKPLYVAMAQKKEERKAKLEAQFASRGPVNF 391
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L + +K L + +G I+S K D + + +GYGFV +E A AA+
Sbjct: 128 ANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATD-ASGESKGYGFVQYERDEAAQAAID 186
Query: 119 ALQ-----DKGIHA-QMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
L DK ++ R+QE+D + N+Y+ NL N E DL+ + K+ T+
Sbjct: 187 KLNGMLMNDKKVYVGPFIRKQERDNSPGQVKFNNVYVKNLSENTTEDDLKEIFGKFGTIT 246
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S ++R+ + SK GF ES D Q +Q NG
Sbjct: 247 SAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNGKKF 284
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 28/188 (14%)
Query: 53 PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
P Q+ N+Y++ L+++TT+ DL + ++G I S ++ + + + +GFV+FES
Sbjct: 213 PGQVKFNNVYVKNLSENTTEDDLKEIFGKFGTITSA-VVMREGDGRSKCFGFVNFESPDD 271
Query: 113 ALAAVKALQDKGI--------HAQMARQQEQD-----------------PTNLYIANLPL 147
A AV+ L K AQ ++E + TNLY+ NL
Sbjct: 272 AAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDD 331
Query: 148 NFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ + L L A+Y T+ S +++RD+N S+G GF +S + + + N S + GSK
Sbjct: 332 SVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN-SKMVGSK 390
Query: 208 EPLLVKFA 215
PL V A
Sbjct: 391 -PLYVALA 397
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L D L ++ +Q G ++S + D T + GY +V++ S A A++
Sbjct: 40 TSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE 99
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L I+ + R +DP+ N++I NL + L + ++S ++
Sbjct: 100 MLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKV 159
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + SKG GF + E + I NG + K
Sbjct: 160 ATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKK 197
>gi|349931692|dbj|GAA40288.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 941
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L + +++ + S G + S K + +K T + GY FV + A A+
Sbjct: 361 KTNLIVNYLPPFMSQEEVKALFSSIGEVESCKLVREKATGESLGYAFVKYIRAADAEKAI 420
Query: 118 KAL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ L Q+K I +AR + NLYI LP + +LE L + +++ RIL
Sbjct: 421 RTLNGLRLQNKTIKVSLARPSSESIKGANLYICGLPKKMTQTELEDLFKQCGRIITARIL 480
Query: 171 RDNNN-TSKGVGFARLESKDKCDQMIQLFNGSTLPGS------KEPLLVKFADS 217
DN S+GV F R + + + + I+ NG P EP+ VKFA+S
Sbjct: 481 YDNKTGLSRGVAFIRFDQRHEAELAIRRLNGYQAPPEHPNGVPSEPITVKFANS 534
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L +T + +L + +G + + K I D T+NKC+G+GFV + AL A+ +L
Sbjct: 649 IFVYNLAPETEEANLWQLFGPFGAVQTVKIIRDPTSNKCKGFGFVTMSNYEEALLAIHSL 708
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT DL+ + S YG I S ++ K R + FV+FES A AV+
Sbjct: 103 NVFVKNLSESTTKDDLVKVFSGYGTITSA-VVMIGMDGKSRCFDFVNFESPDDAARAVEE 161
Query: 120 LQDKGIH--------AQMARQQEQDPT-----------------NLYIANLPLNFKECDL 154
L K I+ AQ ++E D NLY+ NL + L
Sbjct: 162 LNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQL 221
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 222 RELFSNFGKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISG--KPLYVAF 279
Query: 215 A 215
A
Sbjct: 280 A 280
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L + +K L + S +G I+S K +D + +G+GFV +E A +A+K
Sbjct: 11 ANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMD-DIGQSKGFGFVQYEKEESAQSAMK 69
Query: 119 AL-----QDKGIHA-QMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
+L DK ++ R+QE+D + N+++ NL + + DL + + Y T+
Sbjct: 70 SLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKVFSGYGTIT 129
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S ++ + S+ F ES D + ++ NG +
Sbjct: 130 SAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKI 167
>gi|257215880|emb|CAX83092.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK- 118
NL I + TD DL N+ S G I + + I D+ + G+GF ++E A A+
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITR 67
Query: 119 ----ALQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD 172
+ DK + +A+ Q + +NLY+ N P E DL + ++ V+ RILRD
Sbjct: 68 FNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRD 127
Query: 173 NN-NTSKGVGFARLESKDKCDQMIQLFNGSTLPGS--KEPLLVKFADSGLKKRGAGAGGP 229
++ N SKG + E+ + + + PGS + L +KF ++
Sbjct: 128 HDTNVSKGSAYILFENSVDAEAAKRSLDAHIWPGSSDNQTLSIKFTTPPYQQSANSTKSK 187
Query: 230 NIYRGPGAEVRLWGRDSADSQLA 252
N +R P + + G D + QL+
Sbjct: 188 NNFRRPFVQQQHLGNDCFNGQLS 210
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+NLY++ T+ DL Q+G +I + + D TN +G ++ FE+ A AA +
Sbjct: 93 SNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYILFENSVDAEAAKR 152
Query: 119 AL 120
+L
Sbjct: 153 SL 154
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ M +Q+GPI+S A L+K + K +G+GFV++E+ A+ AV
Sbjct: 219 TNLYVKNINSETTDEKFQEMFAQFGPIVS--ASLEKDADGKLKGFGFVNYENHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL + ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + + A++ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E+ + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEK 288
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A+ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIDQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
S+TNL I L Q+ T+ +L M G + + K + D T G+GFV+++ A+ A
Sbjct: 25 SRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDAIRA 84
Query: 117 VKAL-----QDKGIHAQMAR--QQEQDPTNLYIANLP-LNFKECDLESLLAKYVTVVSTR 168
++ L Q+K I AR +++ TNLY+ NLP + E +L ++ + + +V
Sbjct: 85 IQTLNGLQIQNKRIKVSYARPPGEDRKETNLYVTNLPSRDVTEDELTNIFSAHGNIVQMN 144
Query: 169 ILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGAG 227
+L+D +GV F R + +++ I+ NG+ G P+ VK A+ K++ A
Sbjct: 145 LLKDKITGMPRGVAFVRFDKREEALAAIEHLNGTIPHGRTNPISVKIAEEHGKQKAAYFA 204
Query: 228 G 228
G
Sbjct: 205 G 205
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLY++ L + +++ + SQ+GPI S D+ N +G+GFV+FE+ A AV+
Sbjct: 255 TNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGN-SKGFGFVNFENHEDAQRAVE 313
Query: 119 ALQDKGIHA----------------QMARQQEQDP---------TNLYIANLPLNFKECD 153
L +K IH ++ +Q EQ +NLYI NL + +
Sbjct: 314 ELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLEDDVDDEK 373
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + + T+ S +++RD TSKG GF S D+ + + N + G+K PL V
Sbjct: 374 LRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIV-GTK-PLYVA 431
Query: 214 FA 215
A
Sbjct: 432 LA 433
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L Q +K L + + +G ++S K D + +GYGFV ++S A AA+KA
Sbjct: 163 NIFIKNLDQGIDNKALHDTFAAFGTVLSCKVATD-DSGLSKGYGFVHYDSNEAAEAAIKA 221
Query: 120 -----LQDKGIHA--QMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L DK + ++R++ Q TNLY+ NL E + E L +++ +
Sbjct: 222 VNGMLLNDKKVFVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPI 281
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
S I +D SKG GF E+ + + ++ + + G +P+ V
Sbjct: 282 TSAVIQKDEEGNSKGFGFVNFENHEDAQRAVEELDNKEIHG--KPVFV 327
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESGGYALA 115
+LY+ L T+ L + + GP+ S + D T + GY +V++ G AL
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALD 133
Query: 116 AVKALQDKGIHAQMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ Q +G ++ Q +DP N++I NL L A + TV+S +
Sbjct: 134 QLNYSQIRGKPCRIMWSQ-RDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLSCK 192
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ D++ SKG GF +S + + I+ NG L
Sbjct: 193 VATDDSGLSKGYGFVHYDSNEAAEAAIKAVNGMLL 227
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 54/289 (18%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q NGSP TN+Y++ L++ TD+DL + YG I S + D K R
Sbjct: 206 QTNGSP---------KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKD-VNGKSRC 255
Query: 102 YGFVDFESGGYALAAVKALQDKGIH--------------------------AQMARQQEQ 135
+GFV+F++ A AAV+ L I+ +++R ++
Sbjct: 256 FGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKL 315
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMI 195
NLY+ NL +F + L+ L +++ T+ S +++ D+N SKG GF + ++ + +
Sbjct: 316 QGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKAL 375
Query: 196 QLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEH 255
NG + ++PL V A +++ R PG G + + H
Sbjct: 376 NEMNGKLI--GRKPLYVAVAQRKEERKAHLQAQFAQIRAPG------GMAPLPAGIPLYH 427
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYT----------PWVPTQYVMP 294
P P A Q PG PAG++ P V ++MP
Sbjct: 428 PGAPRLAPQQLYYGQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMP 476
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + + +G ++S K LD ++ + +GYGFV F++ A A+K
Sbjct: 124 NVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALD-SSGQSKGYGFVQFDNEEAAQNAIKR 182
Query: 120 LQ-----DKGIHAQM-ARQQEQDPTN-------LYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + R+QE++ TN +Y+ NL + + DL+ L Y T+ S
Sbjct: 183 LNGMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITS 242
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+++D N S+ GF ++ D ++ NG+T+
Sbjct: 243 ATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTI 279
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
+PG G + +LY+ L + ++ L ++ SQ I S + D+T GY +V
Sbjct: 22 APGVALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYV 81
Query: 106 DFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLES 156
+F + A A++ L ++ + R ++DP+ N++I NL + L
Sbjct: 82 NFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHD 141
Query: 157 LLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
A + TV+S ++ D++ SKG GF + ++++ I+ NG
Sbjct: 142 TFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNG 185
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 54/289 (18%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q NGSP TN+Y++ L++ TD+DL + YG I S + D K R
Sbjct: 206 QTNGSP---------KFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKD-VNGKSRC 255
Query: 102 YGFVDFESGGYALAAVKALQDKGIH--------------------------AQMARQQEQ 135
+GFV+F++ A AAV+ L I+ +++R ++
Sbjct: 256 FGFVNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKL 315
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMI 195
NLY+ NL +F + L+ L +++ T+ S +++ D+N SKG GF + ++ + +
Sbjct: 316 QGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKAL 375
Query: 196 QLFNGSTLPGSKEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEH 255
NG + ++PL V A +++ R PG G + + H
Sbjct: 376 NEMNGKLI--GRKPLYVAVAQRKEERKAHLQAQFAQIRAPG------GMAPLPAGIPLYH 427
Query: 256 PMTPIPATIQYQRFTAGPGGTGHIPAGYT----------PWVPTQYVMP 294
P P A Q PG PAG++ P V ++MP
Sbjct: 428 PGAPRLAPQQLYYGQGTPGFMPPQPAGFSFQQQILPGMRPGVAPNFIMP 476
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 14/157 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + + +G ++S K LD ++ + +GYGFV F++ A A+K
Sbjct: 124 NVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALD-SSGQSKGYGFVQFDNEEAAQNAIKR 182
Query: 120 LQ-----DKGIHAQM-ARQQEQDPTN-------LYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + R+QE++ TN +Y+ NL + + DL+ L Y T+ S
Sbjct: 183 LNGMLINDKQVYVGLFIRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITS 242
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+++D N S+ GF ++ D ++ NG+T+
Sbjct: 243 ATVMKDVNGKSRCFGFVNFQNPDSAAAAVERLNGTTI 279
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 46 SPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFV 105
+PG G + +LY+ L + ++ L ++ SQ I S + D+T GY +V
Sbjct: 22 APGVALGGGPFANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYV 81
Query: 106 DFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLES 156
+F + A A++ L ++ + R ++DP+ N++I NL + L
Sbjct: 82 NFANAQDASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHD 141
Query: 157 LLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
A + TV+S ++ D++ SKG GF + ++++ I+ NG
Sbjct: 142 TFAAFGTVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNG 185
>gi|76154205|gb|AAX25698.2| SJCHGC08696 protein [Schistosoma japonicum]
Length = 242
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK- 118
NL I + TD DL N+ S G I + + I D+ + G+GF ++E A A+
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSGSSFGFGFCEYEDSCSAHKAITR 67
Query: 119 ----ALQDKGIHAQMARQQEQ--DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD 172
+ DK + +A+ Q + +NLY+ N P E DL + ++ V+ RILRD
Sbjct: 68 FNGYRIADKVLKVSLAKLQGRLCQSSNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRD 127
Query: 173 NN-NTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE--PLLVKFADSGLKKRGAGAGGP 229
++ N SKG + E+ + + + PGS + L +KF ++
Sbjct: 128 HDTNVSKGSAYVLFENSVDAEAAKRSLDAHIWPGSSDNQTLSIKFTTPPYRQSADSTKSK 187
Query: 230 NIYRGPGAEVRLWGRDSADSQLA 252
N +R P + + G D + QL+
Sbjct: 188 NNFRRPFVQQQHLGNDCFNGQLS 210
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+NLY++ T+ DL Q+G +I + + D TN +G +V FE+ A AA +
Sbjct: 93 SNLYVKNFPPTLTEDDLAAEFGQFGRVIQCRILRDHDTNVSKGSAYVLFENSVDAEAAKR 152
Query: 119 AL 120
+L
Sbjct: 153 SL 154
>gi|225680141|gb|EEH18425.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 622
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 24/164 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+YIRG +TTD+ L S++G I KAI+D T C+G+GFV F S ++
Sbjct: 315 TNVYIRGFLPETTDEMLHAYASRFGKIDRCKAIVDLETGLCKGFGFVQFFSFDACENCIR 374
Query: 119 ALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TS 177
G A A+ DL Y VVS +I RD S
Sbjct: 375 GFFHLGYQASFAQ---------------------DLRRHFQPY-QVVSEKISRDEKTGVS 412
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
K VGFAR ES++ ++++ F+ T + LL++FAD+ +K
Sbjct: 413 KEVGFARFESREIAEKVLSQFHNVTAKDGVK-LLLRFADTKAQK 455
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L + +K L + S +G I+S K +D + + +GYGFV FE AL A++
Sbjct: 116 ANIFIKNLDKTIDNKALHDTFSAFGGILSCKVAVD-GSGQSKGYGFVQFEQEESALTAIE 174
Query: 119 A-----LQDKGIHA-QMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
L DK + R+QE+D + N+Y+ NL N E DL+++ Y T+
Sbjct: 175 KVNGMLLNDKQVFVGPFVRRQERDQSGGVSKFNNVYVKNLGENTTEDDLKNVFGAYGTIS 234
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
S ++RD++ SK GF E D + ++ NG
Sbjct: 235 SAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEALNG 269
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 59/263 (22%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y++ L ++TT+ DL N+ YG IS+ ++ + K + +GFV+FE A AV+A
Sbjct: 208 NVYVKNLGENTTEDDLKNVFGAYG-TISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEA 266
Query: 120 LQDKGI----------------HAQMARQQEQDP---------TNLYIANLPLNFKECDL 154
L K A++ + EQ+ NLY+ NL + L
Sbjct: 267 LNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKL 326
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L A Y T+ S +++RD S+G GF S ++ + + NG + GSK PL V
Sbjct: 327 RELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMV-GSK-PLYVAL 384
Query: 215 ADSGLKKRGAGAGG----------------PNIYRGPGAEVRLWGRDSADSQLAY--EHP 256
A ++R P + GPG Q+ Y +HP
Sbjct: 385 AQRKEERRARLQAAFAQMRTSVSPAVPTSLPMYHPGPG----------MSPQMPYYGQHP 434
Query: 257 MTPI---PATIQYQRFTAGPGGT 276
PI PA YQ PGG
Sbjct: 435 SGPIPLQPAAFGYQPQIIRPGGA 457
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L + ++ L + +Q G ++S + D T + GY +V++ S A A++
Sbjct: 28 TSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALE 87
Query: 119 ALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L ++ R +DP+ N++I NL L + + ++S ++
Sbjct: 88 LLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFGGILSCKV 147
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + SKG GF + E ++ I+ NG L
Sbjct: 148 AVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLL 181
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ NLY++ L D+ L + + YG I S K + D + RG GFV F S A
Sbjct: 305 EKYQGVNLYLKNLDDTVDDEKLRELFADYGTITSCKVMRD-PQGQSRGSGFVAFSSPEEA 363
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNLYIA 143
AV K + K ++ +A+++E+ L A
Sbjct: 364 TRAVTEMNGKMVGSKPLYVALAQRKEERRARLQAA 398
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 112 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINT 169
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 170 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 229
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 230 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 270
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 26/142 (18%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 196 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 254
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 255 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 314
Query: 147 LNFKECDLESLLAKYVTVVSTR 168
+ + L + Y + S +
Sbjct: 315 DSIDDDKLRKEFSPYGVITSAK 336
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 22/165 (13%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-----TNKCRGYGFVDF------- 107
+LY+ L D T+ L S GPI+S + D T + GY +++F
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYINFQQPADGE 71
Query: 108 ESGGYALAAVKALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLL 158
E A A+ + + + Q R ++DP N++I NL + L
Sbjct: 72 EQAQRAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTF 131
Query: 159 AKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ + ++S +++ D + S+G GF E+ + Q I NG L
Sbjct: 132 STFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLL 175
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S +++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S +++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S +++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|426229025|ref|XP_004008594.1| PREDICTED: ELAV-like protein 3 isoform 2 [Ovis aries]
Length = 318
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL----- 120
+TQD + ++ G I S K + DK T + GYGFV++ A A+ L
Sbjct: 1 MTQD----EFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL 56
Query: 121 QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTS 177
Q K I AR NLY++ LP + ++E L ++Y ++++RIL D S
Sbjct: 57 QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVS 116
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K G
Sbjct: 117 RGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTG 162
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ NLY+ GL + + K++ + SQYG II+++ ++D+ T RG GF+ F+ A
Sbjct: 73 IRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 132
Query: 116 AVKAL 120
A+K L
Sbjct: 133 AIKGL 137
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 296
>gi|169621614|ref|XP_001804217.1| hypothetical protein SNOG_14018 [Phaeosphaeria nodorum SN15]
gi|160704296|gb|EAT78643.2| hypothetical protein SNOG_14018 [Phaeosphaeria nodorum SN15]
Length = 550
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 34/176 (19%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+TN+YIRGL +TTD+ L ++G I S+K+I+D + C+G+GF+ + + A +
Sbjct: 281 ETNVYIRGLLPETTDEMLQAWGKRFGDIQSSKSIIDNKSQLCKGFGFIKYHNFEDAEDCI 340
Query: 118 KALQDKGIHAQMARQ---------QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
+ G AR+ ++ TNLY++N+P NF E L
Sbjct: 341 RGFHYLGYEVSFARESFYSKLKKFSDECNTNLYVSNIPKNFNEHSL-------------- 386
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL--PGSKEPLL-VKFADSGLKK 221
L N E++D CD +I+ +N + PG +E L+ ++F+D+ +K
Sbjct: 387 YLHAN--------LPSFETRDICDDVIRDYNNKAVSKPGGEEHLIQIRFSDTHEQK 434
>gi|397520903|ref|XP_003830547.1| PREDICTED: ELAV-like protein 3 isoform 2 [Pan paniscus]
Length = 311
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL----- 120
+TQD + ++ G I S K + DK T + GYGFV++ A A+ L
Sbjct: 1 MTQD----EFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL 56
Query: 121 QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTS 177
Q K I AR NLY++ LP + ++E L ++Y ++++RIL D S
Sbjct: 57 QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVS 116
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K G
Sbjct: 117 RGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTG 162
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ NLY+ GL + + K++ + SQYG II+++ ++D+ T RG GF+ F+ A
Sbjct: 73 IRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 132
Query: 116 AVKAL 120
A+K L
Sbjct: 133 AIKGL 137
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 230 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 289
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y++ L + TTD+DL N+ +YGPI S ++ K + +GFV+FE+ A +V+A
Sbjct: 212 NVYVKNLLESTTDEDLKNIFGEYGPITSA-VVMQDGDGKSKCFGFVNFENADDAARSVEA 270
Query: 120 LQDKGI--------HAQMARQQEQDPT-----------------NLYIANLPLNFKECDL 154
L K AQ ++E + NLY+ NL + + L
Sbjct: 271 LNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLDDSIADDKL 330
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L +++ T+ S +++RD N S+G GF + ++ + + NG + + +PL V
Sbjct: 331 RELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMV--ASKPLYVAL 388
Query: 215 ADSGLKKRG 223
A +R
Sbjct: 389 AQRKEDRRA 397
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q T+LY+ L + TD L ++ Q GP++S + D +T + GYG+V++ + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 115 AAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A+ L ++ + R +DP+ N++I NL L + + ++
Sbjct: 88 RALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAIL 147
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S +I D + SKG GF + ++++ NG L
Sbjct: 148 SCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLL 185
>gi|395850847|ref|XP_003797985.1| PREDICTED: ELAV-like protein 3 isoform 1 [Otolemur garnettii]
gi|397520901|ref|XP_003830546.1| PREDICTED: ELAV-like protein 3 isoform 1 [Pan paniscus]
gi|402904297|ref|XP_003914983.1| PREDICTED: ELAV-like protein 3 isoform 1 [Papio anubis]
gi|403302356|ref|XP_003941826.1| PREDICTED: ELAV-like protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|410950488|ref|XP_003981937.1| PREDICTED: ELAV-like protein 3 isoform 2 [Felis catus]
gi|14280337|gb|AAK57545.1| Hu antigen C long [Homo sapiens]
Length = 318
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 66 LTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL----- 120
+TQD + ++ G I S K + DK T + GYGFV++ A A+ L
Sbjct: 1 MTQD----EFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKL 56
Query: 121 QDKGIHAQMARQQEQD--PTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTS 177
Q K I AR NLY++ LP + ++E L ++Y ++++RIL D S
Sbjct: 57 QTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVS 116
Query: 178 KGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
+GVGF R + + + ++ I+ NG G+ EP+ VKFA++ +K G
Sbjct: 117 RGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTG 162
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ NLY+ GL + + K++ + SQYG II+++ ++D+ T RG GF+ F+ A
Sbjct: 73 IRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 132
Query: 116 AVKAL 120
A+K L
Sbjct: 133 AIKGL 137
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + L + +G + + K I D TTNKC+G+GFV + A A+ +L
Sbjct: 237 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 296
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+ NL+++ L K+L M S +G I+S K D + + +GYGFV +E+ A A+
Sbjct: 124 RANLFVKNLEPSIDSKNLYEMFSSFGTILSCKVATD-SAGQSKGYGFVQYETEESAQDAI 182
Query: 118 KALQ-----DK----GIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
L D+ G+H + R +E TN+YI NLP F + DL A + + S
Sbjct: 183 NRLNGMLANDREMFVGLHMRR-RNREVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITSAV 241
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++RD N SK GF E + + ++ NG +
Sbjct: 242 VMRDVNGVSKCFGFVNFEKPEFALEAVKKANGKVI 276
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 48 GTPTGPEQL----SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
GTP L S ++LY+ L + + L + SQ P++S + D + GYG
Sbjct: 22 GTPAAAAVLPPLGSISSLYVGDLAESVDETQLHAVFSQVAPLVSVRVCRDIVSGVSLGYG 81
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDL 154
+V+F S A A++AL + + R +DP+ NL++ NL + +L
Sbjct: 82 YVNFYSRQEATCALEALNFAPLSGKHIRVMFSNRDPSLRKSGRANLFVKNLEPSIDSKNL 141
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
+ + + T++S ++ D+ SKG GF + E+++ I NG L +E F
Sbjct: 142 YEMFSSFGTILSCKVATDSAGQSKGYGFVQYETEESAQDAINRLNG-MLANDRE----MF 196
Query: 215 ADSGLKKRGAGAGGPNIY 232
+++R N+Y
Sbjct: 197 VGLHMRRRNREVKFTNVY 214
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 31/196 (15%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYA 113
++ TN+YI+ L + +D DL + +G I S + D +KC +GFV+FE +A
Sbjct: 207 EVKFTNVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRDVNGVSKC--FGFVNFEKPEFA 264
Query: 114 LAAVK-----ALQDKGIHAQMA--------------RQQEQDP-------TNLYIANLPL 147
L AVK + DK ++ A +Q+++D NLY+ N+
Sbjct: 265 LEAVKKANGKVINDKTLYVGRAQKKAERQAELKTKFKQEDRDKKVDKPNGINLYLKNIDD 324
Query: 148 NFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ + L+ L ++ V S +++ D SKG GF + + I NG + K
Sbjct: 325 SINDEGLKILFEEFGQVTSCKVMVDAQGRSKGSGFVLFATAEAGHSAINGMNGRIV--GK 382
Query: 208 EPLLVKFADSGLKKRG 223
+PL V A ++R
Sbjct: 383 KPLYVGLAQPKEERRA 398
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 56 LSKT---NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
LSKT N+Y++ L++ TTD++L+ +YG I S I+ K R +GFV+FE+
Sbjct: 206 LSKTKFNNVYVKNLSESTTDEELMKFFGEYGTITSA-VIMRDADGKSRCFGFVNFENPDD 264
Query: 113 ALAAVKALQDKGI--------HAQMARQQEQDP-----------------TNLYIANLPL 147
A AV+ L K + AQ ++EQ+ NLY+ NL
Sbjct: 265 AAKAVEGLNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKNLDD 324
Query: 148 NFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ L+ + A+Y T+ S +++RD +G GF + ++ + + NG + G
Sbjct: 325 TISDEKLKEMFAEYGTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMNGKMIAG-- 382
Query: 208 EPLLVKFADSGLKKRG 223
+PL V A +R
Sbjct: 383 KPLYVALAQRKEDRRA 398
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
NG P P Q T+LY+ L Q+ D L ++ +Q ++S + D TT + GYG
Sbjct: 18 NGVANAPNNPNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYG 77
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDL 154
+V+F + A A+ L ++ + R +DP+ N++I NL L
Sbjct: 78 YVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKAL 137
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ + ++S +I D + SKG GF + +S++ I NG +
Sbjct: 138 HDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLNGMLI 186
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI+ L +TT ++L + ++GPI S A+ K RG+GFV++E+ A AV
Sbjct: 265 TNLYIKNLPTETTTEELNEVFGKFGPITSA-AVQSDEHGKHRGFGFVNYENHESASKAVD 323
Query: 119 ALQDKGIH----------------AQMARQQEQDP---------TNLYIANLPLNFKECD 153
AL DK A++ + EQ NLY+ NL + +
Sbjct: 324 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEK 383
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L++ + T+ S ++++D TSKG GF S D+ + + NG L GSK PL V
Sbjct: 384 LQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKML-GSK-PLYVS 441
Query: 214 FA 215
A
Sbjct: 442 LA 443
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 53 PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
P T+LY+ L T+ L + S GP+ S + D T + GY +V++ +
Sbjct: 78 PASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAAD 137
Query: 113 ALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVT 163
A A++ L I + R ++DP+ N++I NL L A +
Sbjct: 138 AERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGD 197
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++S ++ D + SKG GF + + + I+ NG L
Sbjct: 198 ILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQL 237
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 28/189 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + TTD DL N+ ++G I S ++ K +G+GFV+FE+ A AV+
Sbjct: 219 TNVYVKNLAESTTDDDLKNIFGEFGKITSA-VVMKDGEGKPKGFGFVNFENADDAAKAVE 277
Query: 119 ALQDKGI--------HAQMARQQEQD-----------------PTNLYIANLPLNFKECD 153
+L K AQ ++E + +NLY+ NL + +
Sbjct: 278 SLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLDDSVSDEK 337
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ L Y TV S +++RD N S+G GF + ++ + + +G + +PL V
Sbjct: 338 LKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMSGKMI--ENKPLYVA 395
Query: 214 FADSGLKKR 222
A +R
Sbjct: 396 VAQRKEDRR 404
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV-- 117
N++I+ L + K L + S +G IIS K +D ++ + +GYGFV +E+ A A+
Sbjct: 129 NIFIKNLDKSIDHKALHDTFSVFGNIISCKVAVD-SSGQSKGYGFVQYETEESAQKAMGQ 187
Query: 118 ---KALQDKGIHA-QMARQQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ R+QE+D T N+Y+ NL + + DL+++ ++ + S
Sbjct: 188 LNGMLLNDKQVYVGPFLRRQERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITS 247
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+++D KG GF E+ D + ++ NG T
Sbjct: 248 AVVMKDGEGKPKGFGFVNFENADDAAKAVESLNGKTF 284
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 44 NGS--PGTPTGP-----EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTT 96
NGS P TGP Q T+LY+ L + TD L + SQ G ++S + D T
Sbjct: 18 NGSVPPAMVTGPGAAAAAQFGTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLAT 77
Query: 97 NKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPL 147
+ GYG+V+F S A A++ L ++ + R +DP+ N++I NL
Sbjct: 78 RRSLGYGYVNFTSPQDAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDK 137
Query: 148 NFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ L + + ++S ++ D++ SKG GF + E+++ + + NG L
Sbjct: 138 SIDHKALHDTFSVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLL 193
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++ +NLY++ L +D+ L + + YG + S K + D RG GFV F + A
Sbjct: 317 DKFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRD-PNGMSRGSGFVAFSTPEEA 375
Query: 114 LAAV-----KALQDKGIHAQMARQQE 134
A+ K +++K ++ +A+++E
Sbjct: 376 TKAMSEMSGKMIENKPLYVAVAQRKE 401
>gi|21707389|gb|AAH33604.1| Rbms3 protein, partial [Mus musculus]
Length = 188
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL------PGSKEPLLVKFADS 217
V+STRILRD N S+GVGFAR+ES +KC+ +IQ FNG L P EPLL KFAD
Sbjct: 6 VISTRILRDANGVSRGVGFARMESTEKCEVVIQHFNGKYLKTPPGIPAPSEPLLCKFADG 65
Query: 218 GLKKR 222
G KKR
Sbjct: 66 GQKKR 70
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 8/172 (4%)
Query: 53 PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
P+ + TNL I + + + +DL +M + +G I+S K + + +K GYGFV + +
Sbjct: 147 PDLDALTNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEG 206
Query: 113 ALAAVKALQDKGIHAQM-------ARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVV 165
A AA++ + I + A + NLY+ L + DL +K+ VV
Sbjct: 207 ATAAIEQMNGHSIDLKFLKVSYATATSSQSTHANLYVNRLEPQVTKEDLAEAFSKFGEVV 266
Query: 166 STRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFAD 216
T+IL D N +S+ VGF ++ + NG+ +P P+ VKFAD
Sbjct: 267 ETKILVDPNTGSSRCVGFVHFSARRNALTALSAMNGANIPCQTGPIYVKFAD 318
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI+ L +TT ++L + ++GPI S A+ K RG+GFV++E+ A AV
Sbjct: 354 TNLYIKNLPTETTTEELNEVFGKFGPITSA-AVQSDEHGKHRGFGFVNYENHESASKAVD 412
Query: 119 ALQDKGIH----------------AQMARQQEQDP---------TNLYIANLPLNFKECD 153
AL DK A++ + EQ NLY+ NL + +
Sbjct: 413 ALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEK 472
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L++ + T+ S ++++D TSKG GF S D+ + + NG L GSK PL V
Sbjct: 473 LQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKML-GSK-PLYVS 530
Query: 214 FA 215
A
Sbjct: 531 LA 532
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 53 PEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGY 112
P T+LY+ L T+ L + S GP+ S + D T + GY +V++ +
Sbjct: 167 PASQPNTSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAAD 226
Query: 113 ALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVT 163
A A++ L I + R ++DP+ N++I NL L A +
Sbjct: 227 AERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFGD 286
Query: 164 VVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++S ++ D + SKG GF + + + I+ NG L
Sbjct: 287 ILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQL 326
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
KTNL + L QD T+ +L + S++G I K I + T YGFVD+ S A AAV
Sbjct: 40 KTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQAAAAV 99
Query: 118 KAL-----QDKGIHAQMARQQEQDPT--NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + K + AR E + T +LY+ NLP E + L A Y +V +L
Sbjct: 100 NGMDGYETRGKRLKVAFARPSEYESTSSSLYVGNLPTYMDEKKVRELFATYGNIVDVNLL 159
Query: 171 RDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLK 220
R NN S+GV F + E + + + G+ PL VKF + K
Sbjct: 160 RHKFNNRSRGVAFLQFELVRDAEVAKYGMDRYMIEGASRPLTVKFVEREKK 210
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL+++ L + + L ++ +YG I+S+K + + K +GYGFV FES + A++
Sbjct: 101 NLFVKNLPESIDNAGLQDIFKKYGNILSSKVVTSED-GKSKGYGFVQFESEESSKVAIEK 159
Query: 120 LQ-----DKGIHA-QMARQQEQ-------DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + ++ ++ TNLY+ NL L+ E L+ + + +VS
Sbjct: 160 LNGYTVADKELYVGKFVKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVS 219
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
I +DNN SKG GF ++ D + ++ NGS L GSK
Sbjct: 220 LVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMNGSQL-GSK 259
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLY++ L D ++ L S +G I+S I +G+GFV++++ A A++
Sbjct: 191 TNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNNGMSKGFGFVNYDNPDDAKKAME 249
Query: 119 AL--------------------QDKGIHAQMARQQEQDP-----TNLYIANLPLNFKECD 153
A+ +++ +H Q +Q++ +N+Y+ N+ + + +
Sbjct: 250 AMNGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNIDDHVSDEE 309
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + T+ S +I+RD+ SKG GF + ++ ++ + F+G G +PL V
Sbjct: 310 LRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHG--KPLYVA 367
Query: 214 FA 215
A
Sbjct: 368 LA 369
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + +YG I S ++ K R +GF++FE+ A AV+
Sbjct: 226 NVFVKNLSESTTKEDLLKVFGEYGSITSA-VVMIGMDGKSRCFGFINFENPDAASRAVQE 284
Query: 120 LQDKGIH----------------AQMARQQEQDPT---------NLYIANLPLNFKECDL 154
L K I+ ++ R+ EQ NLY+ NL + + L
Sbjct: 285 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQL 344
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +++RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 345 RELFSNFGKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISG--KPLYVAF 402
Query: 215 A 215
A
Sbjct: 403 A 403
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
L T+LY+ L +D L + SQ G ++S + D T+ + GY +V+F + A
Sbjct: 43 LPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAAR 102
Query: 116 AVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++ + R +DP+ N++I NL L + + T++S
Sbjct: 103 ALEVLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILS 162
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
++ D SKG GF + E ++ I+ NG + + +P+ V
Sbjct: 163 CKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLI--NDKPVFV 206
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + +YG I S ++ K R +GF++FE+ A AV+
Sbjct: 220 NVFVKNLSESTTKEDLLKIFGEYGNITSA-VVMIGMDGKSRCFGFINFENPDAASRAVQE 278
Query: 120 LQDKGIH----------------AQMARQQEQ---------DPTNLYIANLPLNFKECDL 154
L K I+ ++ R+ EQ NLY+ NL + + L
Sbjct: 279 LNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGLNLYLKNLDDSIGDDQL 338
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + + + S +++RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 339 RELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISG--KPLYVAF 396
Query: 215 A 215
A
Sbjct: 397 A 397
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 12/178 (6%)
Query: 45 GSPGTPTGPEQ-LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
G+ G G Q L T+LY+ L +D L + SQ G ++S + D T+ + GY
Sbjct: 25 GAVGVGLGVAQPLPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYA 84
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDL 154
+V+F + A A++ L ++ + R +DP+ N++I NL L
Sbjct: 85 YVNFNNPLDAARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKSL 144
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
+ + T++S ++ D SKG GF + E ++ I+ NG + + +P+ V
Sbjct: 145 HETFSSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLI--NDKPVFV 200
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
+ NL+++ L + K+L + S +G I+S K D + + +GYGFV +E+ A AA+
Sbjct: 89 RANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATD-SAGQSKGYGFVQYETEESAEAAI 147
Query: 118 KALQDK---------GIHAQMARQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
L G+H + R +E TN+YI NLP F E DL A + + S
Sbjct: 148 NGLNGMLANNRKMFVGLHMRR-RDREVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAV 206
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++RD + SK GF + + + ++ NG +
Sbjct: 207 VMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAI 241
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYA 113
++ TN+YI+ L + ++ DL + +G I S + D +KC +GFV+F+ +A
Sbjct: 172 EVKFTNVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKC--FGFVNFKKPEFA 229
Query: 114 LAAV-----KALQDKGIHAQMARQQEQ--------------------DPTNLYIANLPLN 148
+ AV KA+ DK ++ A+++E+ + NLY+ N+
Sbjct: 230 IEAVEKANGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDG 289
Query: 149 FKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKE 208
+ L+ L ++ V S +++ D SKG GF + + + I NG + K+
Sbjct: 290 INDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIV--GKK 347
Query: 209 PLLVKFA 215
PL V A
Sbjct: 348 PLYVGLA 354
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+LY+ L + + L + SQ P+ + + D + GYG+V+F S A A++
Sbjct: 2 ASLYVGDLAETVDEPQLHALFSQVAPVATVRVCRDILSGVSLGYGYVNFYSRQEATRALE 61
Query: 119 ALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
AL + + R +DP+ NL++ NL N +L + + + ++S ++
Sbjct: 62 ALNFTPLIGKYIRVMFSNRDPSLRKSGRANLFVKNLEPNIDSKNLYEIFSSFGAILSCKV 121
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
D+ SKG GF + E+++ + I NG
Sbjct: 122 ATDSAGQSKGYGFVQYETEESAEAAINGLNG 152
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L++ + +G ++S K LD + +GYGFV FE A A+K
Sbjct: 128 NVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALD-NNGQSKGYGFVQFEQEEAAQNAIKR 186
Query: 120 LQ-----DKGIHAQM-ARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + R QE++ TN+Y+ NL + DL+++ KY ++ S
Sbjct: 187 LNGMLINDKQVYVGLFVRHQERNXGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITS 246
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
++RD + SK GF +S D ++ NG+T K
Sbjct: 247 AVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDK 287
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 117/269 (43%), Gaps = 39/269 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYALAAV 117
TN+Y++ L++ TTD DL N+ +YG I S + D + +KC +GFV+F+S A AAV
Sbjct: 218 TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKC--FGFVNFQSSDSAAAAV 275
Query: 118 -----------------KALQDKGIHAQMARQQEQDP---------TNLYIANLPLNFKE 151
KA + A++ + EQ+ NLY+ NL + +
Sbjct: 276 EHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDDSVND 335
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
L L +++ T+ S +++ D SKG GF + ++ + + + NG + ++PL
Sbjct: 336 EKLXELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMI--GRKPLY 393
Query: 212 VKFADSGLKKRGAGAGGPNIYRGPGAEVRLW----GRDSADSQLAYEHPM--TPIPATIQ 265
V A +++ R PGA L G S +LA + P I
Sbjct: 394 VAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIP 453
Query: 266 YQRFTAGPGGTGHIPAGYTPWVPTQYVMP 294
Q AG G + G P V ++MP
Sbjct: 454 TQ--PAGYGFQQQLMPGMRPGVAPNFIMP 480
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +LY+ L + L ++ Q P++S + D+ GY +V+F S A
Sbjct: 36 FANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATN 95
Query: 116 AVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++ + R +DP+ N++I NL + L A + TV+S
Sbjct: 96 ALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLS 155
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA 226
+I DNN SKG GF + E ++ I+ NG L K+ + F ++R G
Sbjct: 156 CKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG-MLINDKQVYVGLFVRH--QERNXGN 212
Query: 227 GGP---NIY 232
G P N+Y
Sbjct: 213 GSPKFTNVY 221
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESG 110
E+ NLY++ L D+ L + S++G I S K +LD +G GFV F E
Sbjct: 317 EKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLTPEEA 375
Query: 111 GYALAAV--KALQDKGIHAQMARQQEQDPTNL 140
AL + K + K ++ +A+++E+ L
Sbjct: 376 TRALNVMNGKMIGRKPLYVAVAQRKEERKARL 407
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 108 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 165
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 166 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 225
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 226 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 283
Query: 213 KFA 215
A
Sbjct: 284 AIA 286
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 16 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 74
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 75 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 134
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 135 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 177
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 37/239 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N+Y++ L TTD +L + +GPI S+ ++ K + +GFV+FE A AV+A
Sbjct: 204 NVYVKNLADVTTDDELKKVFGAWGPI-SSAVVMRDNDGKSKCFGFVNFEHPDDAAKAVEA 262
Query: 120 LQDKGI----------------HAQMARQQEQDP---------TNLYIANLPLNFKECDL 154
LQ K A++ + EQ+ NLY+ NL + +
Sbjct: 263 LQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKI 322
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L A+Y T+ S +++RD+ SKG GF S D+ + + NG + G+K PL V
Sbjct: 323 RELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMNGKMV-GNK-PLYVAL 380
Query: 215 ADSGLKKR---GAGAGGPNIYRGPGAEVRL----WGRDSADSQLAY--EHPMTPIPATI 264
A ++R A + GP L G Q++Y +HP PIP +
Sbjct: 381 AQRKEERRMRLQAAFAQMRTHVGPAVPTSLPMYHPGAPGMGPQMSYYGQHPPGPIPLQV 439
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
P Q T+LY+ L + ++ L M SQ G ++S + D T + GY +V++ +
Sbjct: 17 APTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQ 76
Query: 112 YALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYV 162
A A++ L G++ + R +DP+ N++I NL + L A +
Sbjct: 77 DATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFG 136
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
++S ++ D + SKG GF + E ++ I+ NG L
Sbjct: 137 NILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLL 177
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ NLY++ L D+ + + ++YG I S K + D + +G GFV F S A
Sbjct: 301 EKYQGVNLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDH-QGQSKGSGFVAFSSPDEA 359
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNLYIA 143
AV K + +K ++ +A+++E+ L A
Sbjct: 360 TRAVTEMNGKMVGNKPLYVALAQRKEERRMRLQAA 394
>gi|154413444|ref|XP_001579752.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913962|gb|EAY18766.1| hypothetical protein TVAG_267990 [Trichomonas vaginalis G3]
Length = 248
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN++I + T++DL N+CSQYG IIS+K +++ T + + +GFV F A AA++
Sbjct: 48 TNVFINYIPPRFTEQDLRNLCSQYGEIISSKIMINLETGQSKCFGFVKFRELSQAHAAIQ 107
Query: 119 ALQ-----DKGIHAQMARQQEQDP---TNLYIANLPLNFKECDLESLLAKY--VTVVSTR 168
A+ +K + A+ A QE+ T LYI +LPL+ + + +++ +T VS
Sbjct: 108 AIDGMSIGNKRLLAKYAESQEKHEKLSTMLYIKHLPLSIDVNGVYQIFSRFGEITQVSPH 167
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSG 218
+ D+ + F R ++++ + + + N + GS+ P+ VK+AD
Sbjct: 168 SV-DSTDPQYWRCFVRYQTQEAATEAMSMNNQIIVEGSR-PIHVKYADEA 215
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLYI+ L T + M +YG + S +D+ N +G+GFV++E A +AV
Sbjct: 225 TNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGN-SKGFGFVNYEHHEEAQSAVD 283
Query: 119 ALQDKGI-------------------------HAQMARQQEQDPTNLYIANLPLNFKECD 153
AL D I A+M + + NLYI NL + +
Sbjct: 284 ALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEK 343
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + + T+ S +++RD+ +TSKG GF S D+ + + N + GSK PL V
Sbjct: 344 LRAEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMI-GSK-PLYVS 401
Query: 214 FADSGLKKR 222
A +R
Sbjct: 402 LAQRREVRR 410
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
LY+ L T+ L + + GP+ S + D T + GY +V++ + A++ L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 121 QDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRILR 171
I + R ++DP N++I NL L A + V+S ++
Sbjct: 106 NYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 172 DNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + SKG GF E+ + + I+ NG L
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGMLL 197
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + YG I S I+ K R +GF++F+S A AV+
Sbjct: 219 NVFVKNLSESTTKEDLVKIFGAYGNITSA-VIMVGMDGKSRCFGFINFKSPDDAARAVEE 277
Query: 120 LQDKGIH----------------AQMARQQEQDPT---------NLYIANLPLNFKECDL 154
L K I+ ++ R+ EQ NLY+ NL + + L
Sbjct: 278 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 337
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + Y + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 338 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISG--KPLYVAF 395
Query: 215 A 215
A
Sbjct: 396 A 396
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L TD L + SQ G ++S + D ++ + GY +V+F + A A++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 120 LQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ + R +DP+ N++I NL L + + ++S ++
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
D SKG GF + + + I+ NG
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNG 189
>gi|356572661|ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
Length = 429
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 24/261 (9%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
L++ + + T+ +L+ M ++ + I DK T RG F+ S A AV
Sbjct: 13 VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVN 72
Query: 119 ALQDKG--------IHAQMAR-QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
A +K + + A + E+ L+I LP N E ++ +L +KY T+ +I
Sbjct: 73 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 132
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGS-TLPGSKEPLLVKFADSGLKKRGAGAGG 228
LR + TSKG F + E+K++ ++ NG + S PL+VK+AD+ K+R A
Sbjct: 133 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTE-KERQA---- 187
Query: 229 PNIYRGPGAEVRLWGRDSADSQ---LAYEHPMTPIPATIQYQRFTAGPGGTGHIPAGYTP 285
R A+ + DSQ + PM+ +P Y PGG G +P P
Sbjct: 188 ---RRAQKAQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYA--YQAPGGYGLMPYRMPP 242
Query: 286 WVPTQ-YVMPAPHMSQVEVLK 305
Y PHM+QV L+
Sbjct: 243 MQSQHGYHNVMPHMNQVNALR 263
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
NL+I + Q+ D++L +G ++S K +DK T + +GFV +++ A +A+
Sbjct: 344 ANLFIYHIPQEFGDQELATAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDTPEAAQSAIS 403
Query: 119 A-----LQDKGIHAQMARQQEQ 135
L K + Q+ R +Q
Sbjct: 404 MMNGCQLGGKKLKVQLKRDNKQ 425
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 40/262 (15%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFES-- 109
G Q TN++I+ L +D D L QYG I+S K + D + K +G+GF+ FE
Sbjct: 185 GDHQKQFTNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFDDS--KSKGFGFISFEDHE 242
Query: 110 --------------GGYALAAVKALQDKGIHAQM-----ARQQEQDP----TNLYIANLP 146
G L A +A + A++ A +QE+ NLYI NL
Sbjct: 243 AANDFVKTINGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTRYQGVNLYIKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ L ++Y T+ S +++ D+ SKG GF S ++ + + NG L
Sbjct: 303 DEIDDERLRKEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEEATKAVTEMNGRILVA- 361
Query: 207 KEPLLVKFADSGLKKRGAGAGGPNIYRGPGAEVRLWGRDSADSQLAYEHPMTPIPATIQY 266
+PL V A ++R A P +VR+ Q A + P+ P+ T+ Y
Sbjct: 362 -KPLYVALAQRKDERRAQLASQYMQRVAP--QVRV-------GQQASQQPVNPVYPTMAY 411
Query: 267 QRFTAGPGGTGHI-PAGYTPWV 287
+ A P +I PAG V
Sbjct: 412 H-YAAMPQAQRNIFPAGQLAQV 432
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +V+F+ A A+
Sbjct: 12 SLYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + R ++DP+ N++I NL + + + + ++S +++
Sbjct: 72 MNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGHILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D N +KG GF E+++ ++ I+ NG L G K
Sbjct: 132 TDENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKK 168
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 29/189 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV-- 117
N+Y++ L++ TT+ +L M ++GPI S ++ K R +GFV+FE+ A AV
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSV-IVVRADDGKSRCFGFVNFENPDDAARAVED 280
Query: 118 ---KALQDKGIHAQMARQQEQDP--------------------TNLYIANLPLNFKECD- 153
K L DK ++ A+++ + TNLY+ NL + + +
Sbjct: 281 LNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEK 340
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ L A++ T+ S +++RD+N +KG GF +S + + + NG + GSK PL V
Sbjct: 341 LKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMV-GSK-PLYVA 398
Query: 214 FADSGLKKR 222
A ++R
Sbjct: 399 LAQRKEERR 407
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
T+LY+ L D L ++ SQ G ++S + D T GY +V+F S A A++
Sbjct: 42 TSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME 101
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L ++ + R +DP+ N++I NL + L + + T++S ++
Sbjct: 102 MLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKV 161
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+ + SKG GF + E + I NG L K
Sbjct: 162 ATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKK 199
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 29/183 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + TTD DL + ++G I S + DK K R +GFV+FE A+ A+
Sbjct: 119 TNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKE-GKSRMFGFVNFEKAEAAVTAID 177
Query: 119 ALQ-----DKGIH---AQMARQQEQDP------------------TNLYIANLPLNFKEC 152
+ +K +H AQ + + QD TNLY+ NL +
Sbjct: 178 KMNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYSVDNT 237
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
L+ L +++ T++S +++ N SKGVGF + ++ + + NG + G+K P+ V
Sbjct: 238 KLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVV-GNK-PIYV 295
Query: 213 KFA 215
A
Sbjct: 296 SLA 298
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + YG I S I+ K R +GF++F+S A AV+
Sbjct: 219 NVFVKNLSESTTKEDLVKIFGAYGNITSA-VIMVGMDGKSRCFGFINFKSPDDAARAVEE 277
Query: 120 LQDKGIH----------------AQMARQQEQDPT---------NLYIANLPLNFKECDL 154
L K I+ ++ R+ EQ NLY+ NL + + L
Sbjct: 278 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 337
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + Y + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 338 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISG--KPLYVAF 395
Query: 215 A 215
A
Sbjct: 396 A 396
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L TD L + SQ G ++S + D ++ + GY +V+F + A A++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 120 LQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ + R +DP+ N++I NL L + + ++S ++
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 159
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
D SKG GF + + + I+ NG
Sbjct: 160 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNG 189
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 13/158 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L + K L + S +G I+S K + D+T N +G+GFV +ES A A+
Sbjct: 97 NIFIKNLDKSVDHKALFDTFSAFGNILSCKVVTDET-NVSKGFGFVHYESQDSADKAIMK 155
Query: 120 LQDKGIHAQMA------------RQQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+ I+ Q + QE TN+Y+ NL + E +L LL Y + +
Sbjct: 156 VNGMIINDQKVFVGPFKSSKERGQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNL 215
Query: 168 RILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
I+ D + SKG GFA E+ D+ ++ NG G
Sbjct: 216 TIMSDEKSKSKGFGFANFETPDEAKNCVEAENGKLFHG 253
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
S ++LY+ L QD TD L + +Q GP+ + + D TT + Y +V++ + A
Sbjct: 5 FSSSSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAER 64
Query: 116 AVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A+ L + + + R ++DP+ N++I NL + L + + ++S
Sbjct: 65 ALDTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFGNILS 124
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+++ D N SKG GF ES+D D+ I NG + K
Sbjct: 125 CKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQK 165
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
++L TN+Y++ L++D +++L ++ YG I + I+ +K +G+GF +FE+ A
Sbjct: 181 QELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNL-TIMSDEKSKSKGFGFANFETPDEA 239
Query: 114 LAAVKALQDKGIHAQ----------MARQQE--------QDPTNLYIANLPLNFKECDLE 155
V+A K H + M R+ E NLYI N+ + L
Sbjct: 240 KNCVEAENGKLFHGKVIYVGRAQKKMEREAELKHKFETKYQGVNLYIKNIDDSIDSDKLR 299
Query: 156 SLLAKYVTVVSTRILRDNNNT-SKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
S A Y T+ S +++RD+ +T SKG GF + D+ + + +G + G+K PL V F
Sbjct: 300 STFAAYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMV-GNK-PLYVAF 357
Query: 215 ADSGLKKRGAGAGGPNIYRG 234
A +R N ++G
Sbjct: 358 AQRKEIRRQHLEAQHNKFKG 377
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 28/181 (15%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++++ L++ TT +DL+ + YG I S I+ K R +GF++F+S A AV+
Sbjct: 218 NVFVKNLSESTTKEDLVKIFGAYGNITSA-VIMVGMDGKSRCFGFINFKSPDDAARAVEE 276
Query: 120 LQDKGIH----------------AQMARQQEQDPT---------NLYIANLPLNFKECDL 154
L K I+ ++ R+ EQ NLY+ NL + + L
Sbjct: 277 LNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQL 336
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L + Y + S +I+RD N SKG GF ++++ Q + NG + G +PL V F
Sbjct: 337 CELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISG--KPLYVAF 394
Query: 215 A 215
A
Sbjct: 395 A 395
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L TD L G ++S + D + G +V+F + A A++
Sbjct: 40 SLYVGDLEASVTDSQLYEF-QPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 120 LQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
L ++ + R +DP+ N++I NL L + + ++S ++
Sbjct: 99 LNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVA 158
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNG 200
D SKG GF + + + I+ NG
Sbjct: 159 TDEMGQSKGFGFVQYDKGEAAQSAIKSLNG 188
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L++ + +G ++S K LD + +GYGFV FE A A+K
Sbjct: 562 NVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALD-NNGQSKGYGFVQFEQEEAAQNAIKR 620
Query: 120 LQ-----DKGIHAQM-ARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + R QE++ TN+Y+ NL + DL+++ KY ++ S
Sbjct: 621 LNGMLINDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITS 680
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
++RD + SK GF +S D ++ NG+T K
Sbjct: 681 AVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDK 721
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYALAAV 117
TN+Y++ L++ TTD DL N+ +YG I S + D + +KC +GFV+F+S A AAV
Sbjct: 652 TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKC--FGFVNFQSSDSAAAAV 709
Query: 118 -----------------KALQDKGIHAQMARQQEQDP---------TNLYIANLPLNFKE 151
KA + A++ + EQ+ TNLY+ NL + +
Sbjct: 710 EHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVND 769
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
L+ L +++ T+ S +++ D SKG GF + ++ + + + NG + ++PL
Sbjct: 770 EKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMI--GRKPLY 827
Query: 212 VKFADSGLKKRGAGAGGPNIYRGPGAEVRLW----GRDSADSQLAYEHPM--TPIPATIQ 265
V A +++ R PGA L G S +LA + P I
Sbjct: 828 VAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIP 887
Query: 266 YQRFTAGPGGTGHIPAGYTPWVPTQYVMP 294
Q AG G + G P V ++MP
Sbjct: 888 TQ--PAGYGFQQQLMPGMRPGVAPNFIMP 914
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 44 NGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYG 103
+G GT G + + +LY+ L + L ++ Q P++S + D+ GY
Sbjct: 459 HGDDGTYCG-GRFANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYA 517
Query: 104 FVDFESGGYALAAVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDL 154
+V+F S A A++ L ++ + R +DP+ N++I NL + L
Sbjct: 518 YVNFASPQDATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKAL 577
Query: 155 ESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
A + TV+S +I DNN SKG GF + E ++ I+ NG L K+ + F
Sbjct: 578 LDTFAAFGTVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG-MLINDKQVYVGLF 636
Query: 215 ADSGLKKRGAGA 226
+ RG G+
Sbjct: 637 VRHQERNRGNGS 648
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESG 110
E+ TNLY++ L D+ L + S++G I S K +LD +G GFV F E
Sbjct: 751 EKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLTPEEA 809
Query: 111 GYALAAV--KALQDKGIHAQMARQQEQDPTNL 140
AL + K + K ++ +A+++E+ L
Sbjct: 810 TRALNVMNGKMIGRKPLYVAVAQRKEERKARL 841
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A++ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A++ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A++ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A++ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL+++ L + + L +M +YG I+S+K ++ + K +GYGFV FES + A++
Sbjct: 101 NLFVKNLPESIDNAGLQDMFKKYGNILSSKVVMSED-GKSKGYGFVQFESEESSNVAIEK 159
Query: 120 LQ-----DKGIHA-QMARQQEQ-------DPTNLYIANLPLNFKECDLESLLAKYVTVVS 166
L DK ++ + ++ ++ TNLY+ NL L+ E L+ + + +VS
Sbjct: 160 LNGSTVGDKQLYVGKFVKKSDRILPGPDARYTNLYMKNLDLDVSEATLQEKFSSFGKIVS 219
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
I +DN SKG GF ++ D + ++ NGS L GSK
Sbjct: 220 LVIAKDNIGMSKGFGFVNYDNPDDAKRAMEAMNGSKL-GSK 259
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+LY+ L + +D L++ S + + S + D +T K YG+V+F S A+ A++
Sbjct: 12 ASLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNFVSPQDAIRAIE 71
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ ++ + R +DP NL++ NLP + L+ + KY ++S+++
Sbjct: 72 LKNNSTLNGKAMRVMWSRRDPDARKNAIGNLFVKNLPESIDNAGLQDMFKKYGNILSSKV 131
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
+ + SKG GF + ES++ + I+ NGST+ G K+ + KF
Sbjct: 132 VMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTV-GDKQLYVGKFV 176
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNLY++ L D ++ L S +G I+S I +G+GFV++++ A A++
Sbjct: 191 TNLYMKNLDLDVSEATLQEKFSSFGKIVSL-VIAKDNIGMSKGFGFVNYDNPDDAKRAME 249
Query: 119 AL---------------QDKGIHAQMARQQEQDP----------TNLYIANLPLNFKECD 153
A+ Q K Q+ Q ++ +N+Y+ N+ + + +
Sbjct: 250 AMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKNIDDHVSDEE 309
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + + S +I+RD+ SKG GF + ++ ++ + F+G G +PL V
Sbjct: 310 LRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFHG--KPLYVA 367
Query: 214 FA 215
A
Sbjct: 368 LA 369
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Query: 68 QDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL-----QD 122
+D TD++L N+ S G I + K + D T GYGFVD+ S + A+ L ++
Sbjct: 26 KDMTDRELYNLFSSCGSINTCKIMRDYKTGYSFGYGFVDYNSEADSEDAILKLNGFYVRN 85
Query: 123 KGIHAQMARQ--QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKG 179
K + AR Q TNLY+ NL N + L+ + + Y +V ILRD +G
Sbjct: 86 KRLKVSYARPGGQSIKDTNLYVINLSRNINDDQLDRIFSPYGLIVQRNILRDKLTGRPRG 145
Query: 180 VGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGA 224
V F R +++ + I+ N + G +P+ V+ A+ K + A
Sbjct: 146 VAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAA 190
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G + + TNLY+ L+++ D L + S YG I+ + DK T + RG FV +
Sbjct: 96 GGQSIKDTNLYVINLSRNINDDQLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYNKRE 155
Query: 112 YALAAVKALQD 122
A A+KAL +
Sbjct: 156 EAQEAIKALNN 166
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L + SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYALAAVK 118
N++++ L +D+DL + + +G I+S + DKT N G+GFV F + A A++
Sbjct: 123 NVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENEAQDAIQ 182
Query: 119 ALQDKGI--------HAQMARQQEQD-PTNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L +K I + A +E+D +NL+I N+P ++ E L+ + + +I
Sbjct: 183 GLNEKSIGNKRLLCKLSNSAGNKEKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKI 242
Query: 170 LRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTL--PGSKE--PLLVKFADSGLKKRGA 224
+ D N SK GF + E++ IQ NGS L SK+ PL+V+FA++ +K+
Sbjct: 243 MIDINTQRSKCYGFCKFENRKDALSAIQKMNGSKLDDDSSKDILPLVVRFAETEHEKQKR 302
Query: 225 GAGGPNIYRGP 235
I R P
Sbjct: 303 KLKTRQIIRPP 313
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL+I L D D L+ + S++G I S K I D TN +GYGFV + + A+ AV
Sbjct: 477 NLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFVKYCNIDSAMEAVSK 536
Query: 120 LQDKGI 125
+ I
Sbjct: 537 MNSYKI 542
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ ++NL+IR + ++ L +GPI K ++D T + + YGF FE+ A
Sbjct: 206 EKDQQSNLFIRNIPPHYDEETLKQAFEVFGPISKVKIMIDINTQRSKCYGFCKFENRKDA 265
Query: 114 LAAVKAL 120
L+A++ +
Sbjct: 266 LSAIQKM 272
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 133 QEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN--NNTSKGVGFARLESKDK 190
+ D N+++ LP +F + DL L + +VS ++ D N+S G GF R ++++
Sbjct: 117 ENSDLCNVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKTRENSSLGFGFVRFSNENE 176
Query: 191 CDQMIQLFNGSTLPGSKEPLLVKFADSG 218
IQ N ++ G+K LL K ++S
Sbjct: 177 AQDAIQGLNEKSI-GNKR-LLCKLSNSA 202
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 139 NLYIANLPLNFKECDLESLLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQL 197
NL+I +LP + + L L +K+ + S +++RD N SKG GF + + D + +
Sbjct: 477 NLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKTNLSKGYGFVKYCNIDSAMEAVSK 536
Query: 198 FNGSTLPGSKEPLLVKFADSGL 219
N + K+ L V F +S +
Sbjct: 537 MNSYKI--GKKHLKVSFHNSDV 556
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + S+G GF E+ + Q I NG L
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLL 163
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQM 129
A AV + K + ++
Sbjct: 243 EAQKAVVHMNGKEVSGRL 260
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L +K L++ + +G ++S K LD + +GYGFV FE A A+K
Sbjct: 101 ANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALD-NNGQSKGYGFVQFEQEEAAQNAIK 159
Query: 119 ALQ-----DKGIHAQM-ARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVV 165
L DK ++ + R QE++ TN+Y+ NL + DL+++ KY ++
Sbjct: 160 RLNGMLINDKQVYVGLFVRHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSIT 219
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
S ++RD + SK GF +S D ++ NG+T K
Sbjct: 220 SAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHLNGATFNDDK 261
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKT-TNKCRGYGFVDFESGGYALAAV 117
TN+Y++ L++ TTD DL N+ +YG I S + D + +KC +GFV+F+S A AAV
Sbjct: 192 TNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKC--FGFVNFQSSDSAAAAV 249
Query: 118 -----------------KALQDKGIHAQMARQQEQDP---------TNLYIANLPLNFKE 151
KA + A++ + EQ+ TNLY+ NL + +
Sbjct: 250 EHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVND 309
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
L+ L +++ T+ S +++ D SKG GF + ++ + + + NG + ++PL
Sbjct: 310 EKLKELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMI--GRKPLY 367
Query: 212 VKFADSGLKKRGAGAGGPNIYRGPGAEVRLW----GRDSADSQLAYEHPM--TPIPATIQ 265
V A +++ R PGA L G S +LA + P I
Sbjct: 368 VAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGLIP 427
Query: 266 YQRFTAGPGGTGHIPAGYTPWVPTQYVMP 294
Q AG G + G P V ++MP
Sbjct: 428 TQ--PAGYGFQQQLMPGMRPGVAPNFIMP 454
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 56 LSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALA 115
+ +LY+ L + L ++ Q P++S + D+ GY +V+F S A
Sbjct: 10 FANASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATN 69
Query: 116 AVKALQDKGIHAQMARQQ--EQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVS 166
A++ L ++ + R +DP+ N++I NL + L A + TV+S
Sbjct: 70 ALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLS 129
Query: 167 TRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAGA 226
+I DNN SKG GF + E ++ I+ NG L K+ + F + RG G+
Sbjct: 130 CKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNG-MLINDKQVYVGLFVRHQERNRGNGS 188
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESG 110
E+ TNLY++ L D+ L + S++G I S K +LD +G GFV F E
Sbjct: 291 EKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVMLD-PQGLSKGSGFVAFLTPEEA 349
Query: 111 GYALAAV--KALQDKGIHAQMARQQEQDPTNL 140
AL + K + K ++ +A+++E+ L
Sbjct: 350 TRALNVMNGKMIGRKPLYVAVAQRKEERKARL 381
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK-----ALQDKGIHAQMARQ 132
+ S G I S K I DK T + GY FV + A A+ +LQ+K I +AR
Sbjct: 9 LFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVSLARP 68
Query: 133 QEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKD 189
+ NLYI+ LP K+ +LE L ++Y +++ RIL DN S+GV F R +
Sbjct: 69 NCESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRY 128
Query: 190 KCDQMIQLFNGSTLPGS------KEPLLVKFAD 216
+ + IQ NG LP P+ VKFA+
Sbjct: 129 EAELAIQQLNGYQLPFEYSNDILNRPITVKFAN 161
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + +L + SQYG II+ + + D T RG F+ F A
Sbjct: 71 ESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEA 130
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFK 150
A++ L + + + P + AN P + K
Sbjct: 131 ELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNSIK 167
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + +L ++ +G + S K I D T NKC+G+ FV + A+ A+ +L
Sbjct: 269 IFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIHSL 328
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TNL++ L LI + +G I+ ++ + D T +GYGFV + YA A+K
Sbjct: 229 TNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDPRYAAEAIK 288
Query: 119 ALQDKGIHAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVST 167
+ + + +M +E D + LY+ NLPL E L L Y V S
Sbjct: 289 HMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSV 348
Query: 168 RILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
+++RD+ SKG GF R I NG + G K + V
Sbjct: 349 KVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRV 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
+++ +N+Y++ L L+N+ YG + S K +D T+ +GYGFV F A
Sbjct: 418 KEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDA 477
Query: 114 LAAVKAL-----QDKGI-------------HAQMARQQEQDPTNLYIANLPLNFKECDLE 155
AV L + + I HA +E D +NLY+ N+P + + L
Sbjct: 478 AHAVIELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMSNLYVCNIPSSMNKAKLV 537
Query: 156 SLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFA 215
L + + ++ +NN+SKG GF + + + + NG+ + G E + V+ A
Sbjct: 538 ELFLPFGRITHAMVVEQSNNSSKGYGFVKFADSHCAAEAVAMMNGALIEG--ETISVRVA 595
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Query: 41 VQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCR 100
V+ G+P + + E + + LY+ L + L ++ YG + S K + D T +
Sbjct: 302 VRLAGAPSSGSTKE-MDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSK 360
Query: 101 GYGFVDFESGGYALAAVKAL-----QDKGIHAQMAR--------------------QQEQ 135
GYGFV + +A A+ L + K + ++A +E
Sbjct: 361 GYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVAAVSSSGSNTSVQAISETDHQLTKEV 420
Query: 136 DPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQM 194
D +N+Y+ NLPL L +L Y V S ++ D + SKG GF +
Sbjct: 421 DMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDAAHA 480
Query: 195 IQLFNGSTLPGSKEPLLVK 213
+ NG + G K +LV+
Sbjct: 481 VIELNGCLVEGRK--ILVR 497
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 46 SPGTPTGP-EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGF 104
+P TP Q+ TNLY+ L T LI + G I K ++DK T +G+GF
Sbjct: 800 TPQTPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGF 859
Query: 105 VDFESGGYALAAVKALQDKGIHAQM--ARQQEQDPTNL--YIANLPLNFKECD 153
V F A A+ + + M R P+++ Y+A+ F D
Sbjct: 860 VRFADAYSAATAITHMNGYPLDGHMLAVRTAGVQPSDMASYMAHFYSYFTSTD 912
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 68/200 (34%), Gaps = 33/200 (16%)
Query: 32 GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAI 91
G+ P+ N Q S +++ NLY+ + T + L+ + YG I+ K
Sbjct: 690 GSEPLPANAAQSACSQSGSKLVKEIDMANLYVGRVPSAVTCEQLVQIFCLYGEIVQAKKF 749
Query: 92 LDKTTNKCRGYGFVD----------------FESGGYALAA-VKALQDKGIHAQMAR--- 131
GYG + ++ GG L V L + A AR
Sbjct: 750 -------DAGYGMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAESDVATFARTPQ 802
Query: 132 -----QQEQDPTNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARL 185
++ D TNLY+ LP L L + +++ D SKG GF R
Sbjct: 803 TPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRF 862
Query: 186 ESKDKCDQMIQLFNGSTLPG 205
I NG L G
Sbjct: 863 ADAYSAATAITHMNGYPLDG 882
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 78 MCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK-----ALQDKGIHAQMARQ 132
+ S G I S K I DK T + GY FV + A A+ +LQ+K I +AR
Sbjct: 9 LFSTCGQIESCKLIRDKLTGESLGYAFVKYSHSNEAQQAIHKLNGLSLQNKTIKVSLARP 68
Query: 133 QEQDP--TNLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNN-TSKGVGFARLESKD 189
+ NLYI+ LP K+ +LE L ++Y +++ RIL DN S+GV F R +
Sbjct: 69 NCESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRY 128
Query: 190 KCDQMIQLFNGSTLPGS------KEPLLVKFAD 216
+ + IQ NG LP P+ VKFA+
Sbjct: 129 EAELAIQQLNGYQLPFEYSNDILNRPITVKFAN 161
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E + NLYI GL + +L + SQYG II+ + + D T RG F+ F A
Sbjct: 71 ESIKGANLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTGISRGVAFIRFNHRYEA 130
Query: 114 LAAVKALQDKGIHAQMARQQEQDPTNLYIANLPLNFK 150
A++ L + + + P + AN P + K
Sbjct: 131 ELAIQQLNGYQLPFEYSNDILNRPITVKFANPPNSIK 167
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ + + +L ++ +G + S K I D T NKC+G+ FV + A+ A+ +L
Sbjct: 270 IFVYNLSPEVEESNLWHLFGPFGAVQSIKIIYDITNNKCKGFAFVTMSNYEEAVLAIHSL 329
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S+K + ++ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + +++E + TN+Y+ NL N E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
S +++RD+N S+G GF E ++ + + NG + G
Sbjct: 218 QSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSG 258
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L + ++ L ++ SQ+G + S K + D + + RG+GFV+FE
Sbjct: 184 GARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQM-------------------------ARQQEQDPTNLYIANLP 146
A AV + K + Q+ RQ NLY+ NL
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L+ + + Y + S +++ ++++ SKG GF S ++ + + NG + G+
Sbjct: 303 DSINDERLKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG S ++LY+ L D T+ L M S G I+S + D T + GY +++F+
Sbjct: 3 TGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 111 GYALAAVKALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKY 161
A A+ + + I Q R +DP N++I NL + L + +
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF 122
Query: 162 VTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+++S++++ N + S+G GF E+ + + I NG L K + V S K+
Sbjct: 123 GSILSSKVVY-NEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRK--VFVGHFKSRQKR 179
Query: 222 R---GAGA-GGPNIY 232
GA A G NIY
Sbjct: 180 EAELGARALGFTNIY 194
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S+K + ++ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + +++E + TN+Y+ NL N E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
S +++RD+N S+G GF E ++ + + NG + G
Sbjct: 218 QSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSG 258
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L + ++ L ++ SQ+G + S K + D + + RG+GFV+FE
Sbjct: 184 GARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQM-------------------------ARQQEQDPTNLYIANLP 146
A AV + K + Q+ RQ NLY+ NL
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L+ + + Y + S +++ ++++ SKG GF S ++ + + NG + G+
Sbjct: 303 DSINDERLKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG S ++LY+ L D T+ L M S G I+S + D T + GY +++F+
Sbjct: 3 TGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 111 GYALAAVKALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKY 161
A A+ + + I Q R +DP N++I NL + L + +
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF 122
Query: 162 VTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+++S++++ N + S+G GF E+ + + I NG L K + V S K+
Sbjct: 123 GSILSSKVVY-NEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRK--VFVGHFKSRQKR 179
Query: 222 R---GAGA-GGPNIY 232
GA A G NIY
Sbjct: 180 EAELGARALGFTNIY 194
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S+K + ++ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNE--HGSRGFGFVHFETHEAAQKAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + +++E + TN+Y+ NL N E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
S +++RD+N S+G GF E ++ + + NG + G
Sbjct: 218 QSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSG 258
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L + ++ L ++ SQ+G + S K + D + + RG+GFV+FE
Sbjct: 184 GARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQM-------------------------ARQQEQDPTNLYIANLP 146
A AV + K + Q+ RQ NLY+ NL
Sbjct: 243 EAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQNRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L+ + + Y + S +++ ++++ SKG GF S ++ + + NG + G+
Sbjct: 303 DSINDERLKEVFSTYGVITSAKVMTESSH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 51 TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESG 110
TG S ++LY+ L D T+ L M S G I+S + D T + GY +++F+
Sbjct: 3 TGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQP 62
Query: 111 GYALAAVKALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKY 161
A A+ + + I Q R +DP N++I NL + L + +
Sbjct: 63 ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF 122
Query: 162 VTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKK 221
+++S++++ N + S+G GF E+ + + I NG L K + V S K+
Sbjct: 123 GSILSSKVVY-NEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRK--VFVGHFKSRQKR 179
Query: 222 R---GAGA-GGPNIY 232
GA A G NIY
Sbjct: 180 EAELGARALGFTNIY 194
>gi|281203789|gb|EFA77985.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 447
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
NL++ L T +DL +M S +G I S + ++D T + RG+GFV F+ A A+KA
Sbjct: 139 NLFVNFLPSTVTTEDLRSMFSAFGAIESCRVMIDLVTGQSRGFGFVKFKDNNNANNAIKA 198
Query: 120 LQDKGI--------HAQMAR-----------QQEQDPTNLYIANLPLNFKECDLESLLAK 160
+ I HA + + NLYI LPL+F + L +
Sbjct: 199 MNGAKIEKKTLLVRHANVENSVTTGGVAPHVDDAKATNNLYIKGLPLSFTQEQLNEFFSA 258
Query: 161 YVTVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGL 219
Y T++ +++L D NTS+G R + I+ PG+ + ++V++AD+
Sbjct: 259 YGTILESKLLLDITTNTSRGQALVRFAEISSATKSIKALTNYKFPGADKVVIVRYADNEE 318
Query: 220 KK 221
+K
Sbjct: 319 EK 320
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 58/224 (25%)
Query: 40 NVQHNGSPG--TPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN 97
NV+++ + G P + + NLYI+GL T + L S YG I+ +K +LD TTN
Sbjct: 215 NVENSVTTGGVAPHVDDAKATNNLYIKGLPLSFTQEQLNEFFSAYGTILESKLLLDITTN 274
Query: 98 KCRGYGFVDFESGGYALAAVKAL-------------------QDKGIHAQMARQQE---- 134
RG V F A ++KAL +++ +H +M Q +
Sbjct: 275 TSRGQALVRFAEISSATKSIKALTNYKFPGADKVVIVRYADNEEEKVHKRMKTQHKTRSN 334
Query: 135 --------------------------------QDPTNLYIANLPLNFKECDLESLLAKYV 162
DPTNLYI NLP + + L L +
Sbjct: 335 LRFSPYPSPTTTPLYPAPTAFYQMSPVIGGLGMDPTNLYIYNLPADADDALLYRLFSPSG 394
Query: 163 TVVSTRILRD-NNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+ S ++++D KG GF R+ + I NG T+ G
Sbjct: 395 AIASVKVVKDPITQACKGFGFVRMVNLQDAINAINSVNGVTVEG 438
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L++ T+D+DL S YG I S + D++ K +G+GFV+F+S A AAV+
Sbjct: 212 TNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQS-GKSKGFGFVNFQSPDSAAAAVE 270
Query: 119 AL---------------QDKG-IHAQMARQQEQD---------PTNLYIANLPLNFKECD 153
L Q KG A++ + EQ+ NLY+ NL +
Sbjct: 271 KLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDDKIDDEK 330
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ L +++ ++ S +++ D SKG GF + ++ + + NG + K+PL V
Sbjct: 331 LKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMI--GKKPLYVA 388
Query: 214 FA 215
A
Sbjct: 389 VA 390
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L +K L + +G ++S K +D + +GYGFV FE+ A +A+
Sbjct: 121 ANVFIKNLDTSIDNKALQETFASFGSVLSCKVAVD-NNGQSKGYGFVQFENEEAAQSAIN 179
Query: 119 ALQ-----DKGIHA-QMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVV 165
L DK + + R QE+ TN+Y+ NL + DL+ + Y +
Sbjct: 180 RLNGMLINDKEVFVGRFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGAIT 239
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S +++D + SKG GF +S D ++ NG+T
Sbjct: 240 SAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKLNGTTF 277
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q ++LY+ L + + L ++ SQ ++S + D+ GY +V+F + A
Sbjct: 29 QFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDAS 88
Query: 115 AAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A++ L ++ + R +DP+ N++I NL + L+ A + +V+
Sbjct: 89 NAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVL 148
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAG 225
S ++ DNN SKG GF + E+++ I NG L KE + +F ++R
Sbjct: 149 SCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNG-MLINDKEVFVGRFVRH--QERIEA 205
Query: 226 AGGP---NIY 232
G P N+Y
Sbjct: 206 TGSPKFTNVY 215
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESG 110
E+L NLY++ L D+ L + S++G I S K +LD+ +G GFV F E
Sbjct: 310 EKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQ-QGLSKGSGFVAFSTPEEA 368
Query: 111 GYALAAV--KALQDKGIHAQMARQQEQDPTNL 140
AL + K + K ++ +A+++E+ L
Sbjct: 369 SRALNGMNGKMIGKKPLYVAVAQRREERKARL 400
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D + RG+GFV FE+ A A+
Sbjct: 100 NVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDD--HGSRGFGFVHFETHEAAQQAIST 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP + E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RD++ S+G GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSG 258
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV- 117
TN+Y++ L ++ L ++ SQ+G ++S K + D + + RG+GFV+FE A AV
Sbjct: 191 TNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHEEAQKAVM 249
Query: 118 ------------------------KALQDKGIHAQMARQQEQDPTNLYIANLPLNFKECD 153
L+ + H + R NLY+ NL + +
Sbjct: 250 DMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEK 309
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + Y + S +++ + + SKG GF S ++ + + NG + G+K PL V
Sbjct: 310 LRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRII-GTK-PLYVA 366
Query: 214 FADSGLKKRG 223
A +++
Sbjct: 367 LAQRKEERKA 376
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + I Q R ++DP N++I NL + L + + ++S +++
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D++ S+G GF E+ + Q I NG L
Sbjct: 132 CDDHG-SRGFGFVHFETHEAAQQAISTMNGMLL 163
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 75 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHDAAQRAIST 132
Query: 120 -----LQDKGI---HAQMARQQE-------QDPTNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NL ++ E L+ L +++ +
Sbjct: 133 MNGMLLNDRKVFVGHFKSRREREAELGARVMEFTNIYVKNLQVDVDERGLQDLFSQFGKM 192
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RD++ S+G GF E ++ + + NG + G
Sbjct: 193 LSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSG 233
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 17 NTHSSSSSNTGSQNG---GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDK 73
TH ++ + NG + + + G + TN+Y++ L D ++
Sbjct: 121 ETHDAAQRAISTMNGMLLNDRKVFVGHFKSRREREAELGARVMEFTNIYVKNLQVDVDER 180
Query: 74 DLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGI-------- 125
L ++ SQ+G ++S K + D ++ RG+GFV+FE A AV + K +
Sbjct: 181 GLQDLFSQFGKMLSVKVMRD-SSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVG 239
Query: 126 --HAQMARQQE---------QDP------TNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
++ RQ E QD NLY+ NL + + L + Y + S +
Sbjct: 240 RAQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAK 299
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
++ + + SKG GF S ++ + + NG + G+K PL V A +++
Sbjct: 300 VMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQRKEERKA 351
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 83 GPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-- 138
GPI+S + D T + Y +++F+ A A+ + + I Q R ++DP
Sbjct: 10 GPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRIMWSQRDPGLR 69
Query: 139 -----NLYIANLPLNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQ 193
N++I NL + L + + ++S +++ D + S+G GF E+ D +
Sbjct: 70 KSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHDAAQR 128
Query: 194 MIQLFNGSTLPGSK 207
I NG L K
Sbjct: 129 AISTMNGMLLNDRK 142
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 30/183 (16%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGGYALAAV 117
TNLY++ + +TTD+ + +++GPI+S A L+K + K +G+GFV++E A+ AV
Sbjct: 219 TNLYVKNINSETTDEQFQELFAKFGPIVS--ASLEKDADGKLKGFGFVNYEKHEDAVKAV 276
Query: 118 KALQDKGIHAQ---MARQQEQDP----------------------TNLYIANLPLNFKEC 152
+AL D ++ + + R Q+++ NL++ NL + +
Sbjct: 277 EALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDE 336
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLV 212
LE A Y T+ S +++R N SKG GF + ++ + I N + G +PL V
Sbjct: 337 KLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG--KPLYV 394
Query: 213 KFA 215
A
Sbjct: 395 AIA 397
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L D +K L + S +G I+S+K D+ K +G+GFV FE G A A+ A
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDA 185
Query: 120 L-------QDKGIHAQMARQQEQDP--------TNLYIANLPLNFKECDLESLLAKYVTV 164
L Q+ + ++R++ TNLY+ N+ + + L AK+ +
Sbjct: 186 LNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
VS + +D + KG GF E + + ++ N S L G K
Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEK 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 42 QHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRG 101
Q + G+ + + S +LY+ L ++ L ++ S G + S + D T G
Sbjct: 21 QKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLG 80
Query: 102 YGFVDFESGGYALAAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKEC 152
Y +V+F A++ L I ++ R ++DP+ N++I NL +
Sbjct: 81 YAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNK 140
Query: 153 DLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
L + + ++S++I D N SKG GF E + + I NG L G +
Sbjct: 141 ALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + S+G GF E+ + Q I NG L
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLL 163
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L + +K L + S +G I+S K + D+ +K GYGFV FE+ A A+
Sbjct: 169 NIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSK--GYGFVHFETRDAAERAIDK 226
Query: 120 -----LQDKGIH-----AQMARQQE-----QDPTNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + ++ R+ E ++ TN+YI N + + L+ L K+
Sbjct: 227 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPA 286
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+S +++ D + TSKG GF E + + ++ NG L G K
Sbjct: 287 LSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKK 329
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV- 117
TN+YI+ +D D L + ++GP +S K + D+ + +G+GFV+FE A AV
Sbjct: 260 TNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVE 318
Query: 118 ----KALQDKGIHA-----------QMARQQEQ---------DPTNLYIANLPLNFKECD 153
K L K I+ ++ R+ EQ NLY+ NL +
Sbjct: 319 EMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDER 378
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + + T+ S +++ + SKG GF S ++ + + NG + + +PL +
Sbjct: 379 LRKEFSPFGTITSAKVMMEGGR-SKGFGFVCFSSPEEATKAVTEMNGRIV--ATKPLYIA 435
Query: 214 FA 215
A
Sbjct: 436 LA 437
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 28/182 (15%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L++ T+D+DL S YG I S + D++ K +G+GFV+F+S A AAV+
Sbjct: 202 TNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQS-GKSKGFGFVNFQSPDSAAAAVE 260
Query: 119 AL---------------QDKG-IHAQMARQQEQD---------PTNLYIANLPLNFKECD 153
L Q KG A++ + EQ+ NLY+ NL +
Sbjct: 261 KLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLDDKIDDEK 320
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ L +++ ++ S +++ D SKG GF + ++ + + NG + K+PL V
Sbjct: 321 LKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMI--GKKPLYVA 378
Query: 214 FA 215
A
Sbjct: 379 VA 380
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
N++I+ L +K L + +GP++S K +D + +GYGFV FE+ A +A+
Sbjct: 111 ANVFIKNLDTSIDNKALQETFASFGPVLSCKVAVD-NNGQSKGYGFVQFENEEAAQSAIN 169
Query: 119 ALQ-----DKGIHA-QMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVV 165
L DK + + R QE+ TN+Y+ NL + DL+ + Y ++
Sbjct: 170 RLNGMLINDKEVFVGRFVRHQERIEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGSIT 229
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
S +++D + SKG GF +S D ++ NG+T
Sbjct: 230 SAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKLNGTTF 267
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 55 QLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYAL 114
Q ++LY+ L + + L ++ SQ ++S + D+ GY +V+F + A
Sbjct: 19 QFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDAA 78
Query: 115 AAVKALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVV 165
A++ L ++ + R +DP+ N++I NL + L+ A + V+
Sbjct: 79 NAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGPVL 138
Query: 166 STRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRGAG 225
S ++ DNN SKG GF + E+++ I NG L KE + +F ++R
Sbjct: 139 SCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNG-MLINDKEVFVGRFVRH--QERIEA 195
Query: 226 AGGP---NIY 232
G P N+Y
Sbjct: 196 TGSPKFTNVY 205
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDF---ESG 110
E+L NLY++ L D+ L + S++G I S K +LD+ +G GFV F E
Sbjct: 300 EKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQ-QGLSKGSGFVAFSTPEEA 358
Query: 111 GYALAAV--KALQDKGIHAQMARQQEQDPTNL 140
AL + K + K ++ +A+++E+ L
Sbjct: 359 SRALNGMNGKMIGKKPLYVAVAQRREERKARL 390
>gi|430813847|emb|CCJ28832.1| unnamed protein product [Pneumocystis jirovecii]
gi|430814537|emb|CCJ28247.1| unnamed protein product [Pneumocystis jirovecii]
Length = 248
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 152 CDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLL 211
DLE A Y V+S RILRD+NN S+GVGFAR+ ++ D +I+ F+G LPG+ PL
Sbjct: 8 IDLEEQFAPY-KVISNRILRDSNNISRGVGFARMSDREAADAIIENFDGKKLPGATMPLQ 66
Query: 212 VKFADSGLKKRGAGAGGPNIYRGPGAEVRLW 242
V++ADS +KR +G A RLW
Sbjct: 67 VRYADSPSQKR---------LKGQTARRRLW 88
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETHEAAQQAINT 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NLP++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RDN+ S+ GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSG 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G L TN+Y++ L D ++ L ++ SQ+G ++S K + D + + R +GFV+FE
Sbjct: 184 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHS-RCFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------RQQEQDP------TNLYIANLP 146
A AV + K + ++ Q +QD NLY+ NL
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSIDDDKLRKEFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + + Q R ++DP N++I NL + L + + ++S ++
Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVA 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D + S+G GF E+ + Q I NG L
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQQAINTMNGMLL 163
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 54 EQLSK-TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN-KCRGYGFVDFESGG 111
EQ S+ TNLY++ L + TD + +M +++G + T A++ K K +G+GFV+F+
Sbjct: 231 EQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEV--TSAVVQKDEEGKSKGFGFVNFKDHE 288
Query: 112 YALAAVKALQDKGIH-------------------------AQMARQQEQDPTNLYIANLP 146
A AAV AL D ++ A+M + + NLYI NL
Sbjct: 289 SAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLE 348
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L + + T+ S +I+RD TSKG GF S ++ + + N L GS
Sbjct: 349 DDMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKML-GS 407
Query: 207 KEPLLV 212
K PL V
Sbjct: 408 K-PLYV 412
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+LY+ L T+ L + + GP+ S + D T + GY +V++ + A++
Sbjct: 56 ASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 115
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L I + R ++DP N++I NL L A + V+S ++
Sbjct: 116 QLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLSCKV 175
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
D N S+G GF ++ + D I+ NG L
Sbjct: 176 ATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLL 209
>gi|358340228|dbj|GAA48169.1| RNA-binding motif single-stranded-interacting protein 3 [Clonorchis
sinensis]
Length = 1382
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAA 116
SKTNLYIRGL T++ L + I S K I + YGF+DF S A +A
Sbjct: 968 SKTNLYIRGLAPTFTEEQLHTLAPDKELIRSVKLIAGT---EGEMYGFIDFISNAAARSA 1024
Query: 117 VKALQ--DKGIHAQMARQQEQDPTNLYIANLPLNFKEC---DLESLLAKYVTVVSTRIL- 170
+ ++ ++ ++ A + E+DP N+YI N+P + DL+ + +Y + + ++
Sbjct: 1025 LLHIKSTNRELYVNFAYESEKDPQNVYITNIPETWTASNVEDLKKIFQQYGPIATAIVMT 1084
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGS--TLPGSKEPLLVKFAD 216
+ +NN G GF R + + I+ + TL G K PL VK AD
Sbjct: 1085 KRSNNFCTGAGFVRFVRAEDAQKAIEGIRQAQVTLDGGKGPLEVKLAD 1132
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
K N++I+ L +K L S +G I+S K +D T + +GYGFV FE A AA+
Sbjct: 135 KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAI 193
Query: 118 KALQ-----DKGIHA-QMARQQEQDP---------TNLYIANLPLNFKECDLESLLAKYV 162
L DK + R+QE+ TN+Y+ NLP E +L K+
Sbjct: 194 DKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFG 253
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ S ++RD + S+ GF E + ++ NG +L
Sbjct: 254 VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 28/203 (13%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L ++ + +L ++G +IS+ ++ + R +GFV+FE A +AV+
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFG-VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287
Query: 119 -----ALQDKGIHA-----------QMARQQEQDP---------TNLYIANLPLNFKECD 153
+L D ++ ++ R+ EQ+ NLY+ NL + +
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ + ++Y V S++++ + S+G GF + ++ + + NG + K+PL +
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRALSEMNGKMI--GKKPLYIA 405
Query: 214 FADSGLKKRGAGAGGPNIYRGPG 236
A +R + R PG
Sbjct: 406 LAQRKEDRRAHLQALFSQIRAPG 428
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ NLY++ L D+ L M S+YG + S+K +L+ RG+GFV + + A
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLN-PQGLSRGFGFVAYSNPEEA 385
Query: 114 LAAVKALQDKGI 125
L A+ + K I
Sbjct: 386 LRALSEMNGKMI 397
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L +K L + S +G I+S K + D+ + RG+GFV FE+ A A+
Sbjct: 100 NIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDE--HGSRGFGFVHFETHEAAQNAIST 157
Query: 120 -----LQDKGI---HAQMARQQE-------QDPTNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NL ++ E L+ L +++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPG 205
+S +++RD++ S+G GF E ++ + + NG + G
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSG 258
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 17 NTHSSSSSNTGSQNG---GTHPITTNNVQHNGSPGTPTGPEQLSKTNLYIRGLTQDTTDK 73
TH ++ + + NG + + + G + TN+Y++ L D ++
Sbjct: 146 ETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQ 205
Query: 74 DLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKALQDKGIHAQMA--- 130
L ++ SQ+G ++S K + D + + RG+GFV+FE A AV + + + ++
Sbjct: 206 RLQDLFSQFGKMLSVKVMRDDSGH-SRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVG 264
Query: 131 ----------------RQQEQDP------TNLYIANLPLNFKECDLESLLAKYVTVVSTR 168
Q +QD NLY+ NL + + L + Y + S +
Sbjct: 265 RAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Query: 169 ILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKFADSGLKKRG 223
++ + + SKG GF S ++ + + NG + G+K PL V A +++
Sbjct: 325 VMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGRIV-GTK-PLYVALAQRKEERKA 376
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
+LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 120 LQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRIL 170
+ + I Q R ++DP N++I NL + L + + ++S +++
Sbjct: 72 MNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVV 131
Query: 171 RDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + I NG L K
Sbjct: 132 CDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRK 167
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 60 NLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKA 119
N++I+ L K L + S +G I+S K D+ + RG+GFV FE+ A A+
Sbjct: 100 NVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDE--HGSRGFGFVHFETNEAAQQAIST 157
Query: 120 -----LQDKGI---HAQMARQQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTV 164
L D+ + H + R++E + TN+Y+ NL ++ E L+ L ++ +
Sbjct: 158 MNGMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKM 217
Query: 165 VSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
+S +++RDN+ S+G GF E ++ + + NG + G +
Sbjct: 218 LSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQ 260
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 29/197 (14%)
Query: 52 GPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGG 111
G + L+ TN+Y++ L D ++ L ++ ++G ++S K + D + RG+GFV+FE
Sbjct: 184 GAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRD-NSGHSRGFGFVNFEKHE 242
Query: 112 YALAAVKALQDKGIHAQMA-------------------------RQQEQDPTNLYIANLP 146
A AV + K + Q RQ NLY+ NL
Sbjct: 243 EAQKAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQTRYQGVNLYVKNLD 302
Query: 147 LNFKECDLESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGS 206
+ + L ++ + Y + S +++ + + SKG GF S ++ + + NG + G+
Sbjct: 303 DSISDEKLRTVFSPYGVITSAKVMTEGGH-SKGFGFVCFSSPEEATKAVTEMNGCIV-GT 360
Query: 207 KEPLLVKFADSGLKKRG 223
K PL V A +++
Sbjct: 361 K-PLYVALAQRKEERKA 376
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
++LY+ L D T+ L S GPI+S + D T + GY +++F+ A A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 119 ALQDKGIHAQMAR--QQEQDP-------TNLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
+ + I Q R ++DP N++I NL + L + + ++S ++
Sbjct: 71 TMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKV 130
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + S+G GF E+ + Q I NG L K
Sbjct: 131 ACDEHG-SRGFGFVHFETNEAAQQAISTMNGMLLNDRK 167
>gi|156717966|ref|NP_001096525.1| ELAV-like protein 4 [Xenopus (Silurana) tropicalis]
gi|288561889|sp|A4QNI8.1|ELAV4_XENTR RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|138519953|gb|AAI35737.1| LOC100125165 protein [Xenopus (Silurana) tropicalis]
Length = 400
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN------------------- 97
SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEEHFKDLATGTKWKPL 108
Query: 98 ----------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNL 140
+ GYGFV++ A A+ L Q K I AR NL
Sbjct: 109 TEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANL 168
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFN 199
Y++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ N
Sbjct: 169 YVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLN 228
Query: 200 GSTLPGSKEPLLVKFADS 217
G G+ EP+ VKFA++
Sbjct: 229 GQKPSGAAEPITVKFANN 246
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 319 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 378
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 58 KTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAV 117
K N++I+ L +K L S +G I+S K +D T + +GYGFV FE A AA+
Sbjct: 135 KGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAI 193
Query: 118 KALQ-----DKGIHA-QMARQQEQDP---------TNLYIANLPLNFKECDLESLLAKYV 162
L DK + R+QE+ TN+Y+ NLP E +L K+
Sbjct: 194 DKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFG 253
Query: 163 TVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTL 203
+ S ++RD + S+ GF E + ++ NG +L
Sbjct: 254 VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISL 294
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 28/190 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L ++ + +L ++G +IS+ ++ + R +GFV+FE A +AV+
Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFG-VISSAVVMRDQSGNSRCFGFVNFECTEAAASAVE 287
Query: 119 -----ALQDKGIHA-----------QMARQQEQDP---------TNLYIANLPLNFKECD 153
+L D ++ ++ R+ EQ+ NLY+ NL + +
Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEK 347
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L+ + ++Y V S++++ + S+G GF + ++ + + NG + ++PL +
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMI--GRKPLYIA 405
Query: 214 FADSGLKKRG 223
A +R
Sbjct: 406 LAQRKEDRRA 415
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 54 EQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYA 113
E+ NLY++ L D+ L M S+YG + S+K +L+ RG+GFV + + A
Sbjct: 327 EKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLN-PQGMSRGFGFVAYSNPEEA 385
Query: 114 LAAV-----KALQDKGIHAQMARQQEQDPTNLYI 142
L A+ K + K ++ +A+++E +L I
Sbjct: 386 LRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQI 419
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 28/189 (14%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
TN+Y++ L + T D + + Q+G + S I + RG+GFV+FE+ A AV+
Sbjct: 229 TNIYVKNLDPEVTQDDFVKLFEQFGNVTSA-VIQTDEQGQSRGFGFVNFETHEEAQKAVE 287
Query: 119 ALQDKGIH--------AQMARQQEQD-----------------PTNLYIANLPLNFKECD 153
L D H AQ ++E++ NLYI NL + +
Sbjct: 288 TLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDIDDER 347
Query: 154 LESLLAKYVTVVSTRILRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVK 213
L + ++ S +++RD TSKG GF S D+ + + N + GSK PL V
Sbjct: 348 LRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMI-GSK-PLYVS 405
Query: 214 FADSGLKKR 222
A +R
Sbjct: 406 LAQRREVRR 414
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 59 TNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVK 118
+LY+ L T+ L + + GP+ S + D T + GY +V++ + A++
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 119 ALQDKGIHAQMAR--QQEQDPT-------NLYIANLPLNFKECDLESLLAKYVTVVSTRI 169
L I + R ++DP N++I NL L A + V+S ++
Sbjct: 104 QLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKV 163
Query: 170 LRDNNNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSK 207
D + SKG GF E+ + + I+ NG L K
Sbjct: 164 ATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKK 201
>gi|194901064|ref|XP_001980072.1| GG16933 [Drosophila erecta]
gi|190651775|gb|EDV49030.1| GG16933 [Drosophila erecta]
Length = 255
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 45 GSPGTP--TGPEQLSKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGY 102
GSP P + P +TNL + L QD T+ ++ + S++G I K I + T Y
Sbjct: 24 GSPVPPPISFPYSQDQTNLILNYLPQDMTESEVRRLFSKFGEIRKAKIIRHRLTGISCCY 83
Query: 103 GFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQDP--TNLYIANLPLNFKECDLE 155
GFVD+ S A AA ++ + K + AR E +NLY+ANLP + E +
Sbjct: 84 GFVDYVSARQAAAAQSSMDGYETRGKRLKVAFARPSEDQSRNSNLYVANLPTHLDERKVR 143
Query: 156 SLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFNGSTLPGSKEPLLVKF 214
L A Y V+ +LR N TS+GV F + + + + G+ PL VKF
Sbjct: 144 ELFAVYGIVLDVNLLRHKFNRTSRGVAFVHFKHWRDAEMAKYGMDRHMIEGAFRPLAVKF 203
Query: 215 ADSGLKKRGAGAGGP 229
D K A GP
Sbjct: 204 VDRPPKDSPARGTGP 218
>gi|27696830|gb|AAH43735.1| ElrD protein [Xenopus laevis]
Length = 395
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 37/198 (18%)
Query: 57 SKTNLYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTN------------------- 97
SKTNL + L Q+ T ++ ++ G I S K + DK T
Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGTQFEENFKDLATGTKWKPL 103
Query: 98 ----------KCRGYGFVDFESGGYALAAVKAL-----QDKGIHAQMARQQEQD--PTNL 140
+ GYGFV++ A A+ L Q K I AR NL
Sbjct: 104 TEEGPIFGKGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANL 163
Query: 141 YIANLPLNFKECDLESLLAKYVTVVSTRILRDN-NNTSKGVGFARLESKDKCDQMIQLFN 199
Y++ LP + +LE L ++Y ++++RIL D S+GVGF R + + + ++ I+ N
Sbjct: 164 YVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLN 223
Query: 200 GSTLPGSKEPLLVKFADS 217
G G+ EP+ VKFA++
Sbjct: 224 GQKPSGAAEPITVKFANN 241
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 61 LYIRGLTQDTTDKDLINMCSQYGPIISTKAILDKTTNKCRGYGFVDFESGGYALAAVKAL 120
+++ L+ D+ + L + +G + + K I D TNKC+G+GFV + A A+ +L
Sbjct: 314 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 373
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,256,143,518
Number of Sequences: 23463169
Number of extensions: 241065862
Number of successful extensions: 618696
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10489
Number of HSP's successfully gapped in prelim test: 4925
Number of HSP's that attempted gapping in prelim test: 579405
Number of HSP's gapped (non-prelim): 31813
length of query: 305
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 163
effective length of database: 9,027,425,369
effective search space: 1471470335147
effective search space used: 1471470335147
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 76 (33.9 bits)