Query psy4093
Match_columns 434
No_of_seqs 411 out of 2447
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 16:42:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4093.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4093hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gdm_A Orotidine 5'-phosphate 100.0 2.3E-45 8E-50 359.2 13.5 205 77-310 53-266 (267)
2 3g3d_A UMP synthase, uridine 5 100.0 7.4E-43 2.5E-47 347.3 12.4 200 77-308 107-311 (312)
3 3eww_A Ompdecase, orotidine-5' 100.0 9.8E-42 3.3E-46 332.5 12.9 199 78-308 56-259 (260)
4 3tfx_A Orotidine 5'-phosphate 100.0 1E-37 3.4E-42 304.1 9.1 201 77-307 28-243 (259)
5 3tr2_A Orotidine 5'-phosphate 100.0 1.4E-36 4.8E-41 293.0 8.2 191 80-300 35-236 (239)
6 3ldv_A Orotidine 5'-phosphate 100.0 8E-36 2.7E-40 290.1 10.4 192 78-298 52-253 (255)
7 3ru6_A Orotidine 5'-phosphate 100.0 1.7E-34 5.8E-39 286.5 9.8 193 79-301 50-251 (303)
8 4dbe_A Orotidine 5'-phosphate 100.0 2.2E-33 7.5E-38 268.0 11.5 182 77-308 24-215 (222)
9 3ve9_A Orotidine-5'-phosphate 100.0 1E-31 3.5E-36 255.4 9.1 178 77-308 22-208 (215)
10 3qw3_A Orotidine-5-phosphate d 100.0 5.7E-31 2E-35 256.1 8.5 192 77-306 43-254 (255)
11 3n3m_A Orotidine 5'-phosphate 100.0 2.9E-30 9.7E-35 259.6 3.5 204 76-305 114-337 (342)
12 3m47_A Orotidine 5'-phosphate 100.0 1.9E-29 6.3E-34 241.5 7.1 181 77-303 36-225 (228)
13 3qw4_B UMP synthase; N-termina 100.0 2.9E-28 1E-32 254.3 13.9 192 77-306 44-255 (453)
14 3gdm_A Orotidine 5'-phosphate 99.9 1.4E-28 4.7E-33 240.6 8.4 106 314-419 2-108 (267)
15 3eww_A Ompdecase, orotidine-5' 99.9 4.3E-28 1.5E-32 236.3 9.5 104 314-417 3-107 (260)
16 3g3d_A UMP synthase, uridine 5 99.9 5.8E-28 2E-32 240.3 9.5 105 313-417 54-159 (312)
17 2fds_A Orotidine-monophosphate 99.9 2E-28 7E-33 247.4 4.1 206 77-308 117-342 (352)
18 1vqt_A Orotidine 5'-phosphate 99.9 3.2E-27 1.1E-31 223.9 7.6 167 80-297 35-210 (213)
19 1dbt_A Orotidine 5'-phosphate 99.9 3.4E-26 1.2E-30 219.8 13.0 162 112-301 59-235 (239)
20 1eix_A Orotidine 5'-monophosph 99.9 6.7E-26 2.3E-30 218.7 12.5 161 112-297 70-239 (245)
21 2yyu_A Orotidine 5'-phosphate 99.9 4.9E-26 1.7E-30 219.6 10.4 165 112-302 60-237 (246)
22 2ffc_A Orotidine 5-monophospha 99.9 5.1E-26 1.7E-30 229.9 10.2 164 108-307 161-351 (353)
23 3exr_A RMPD (hexulose-6-phosph 99.9 6.1E-25 2.1E-29 209.2 -0.5 184 78-303 30-219 (221)
24 3l52_A Orotidine 5'-phosphate 99.9 5.5E-23 1.9E-27 202.3 9.8 198 77-303 61-281 (284)
25 3lq0_A Proastacin; metallopept 99.8 4.5E-22 1.5E-26 191.3 3.4 99 15-116 13-223 (235)
26 3r89_A Orotidine 5'-phosphate 99.8 1E-21 3.6E-26 193.8 3.6 176 77-286 58-259 (290)
27 2czd_A Orotidine 5'-phosphate 99.8 6.2E-20 2.1E-24 172.1 10.6 140 112-297 56-203 (208)
28 3tr2_A Orotidine 5'-phosphate 99.8 7.3E-21 2.5E-25 183.3 4.2 80 335-418 2-81 (239)
29 4gwm_A Meprin A subunit beta; 99.8 9.5E-21 3.2E-25 202.9 4.6 99 17-116 24-226 (592)
30 3ru6_A Orotidine 5'-phosphate 99.8 1.9E-19 6.5E-24 178.6 6.1 84 331-417 14-97 (303)
31 3m47_A Orotidine 5'-phosphate 99.7 3.9E-19 1.3E-23 169.9 2.0 85 330-418 2-86 (228)
32 3qw3_A Orotidine-5-phosphate d 99.7 3.5E-18 1.2E-22 166.1 8.0 87 330-418 4-98 (255)
33 3l52_A Orotidine 5'-phosphate 99.7 2.5E-18 8.6E-23 169.2 6.9 91 327-418 9-117 (284)
34 3tfx_A Orotidine 5'-phosphate 99.7 2.3E-18 7.8E-23 167.7 5.8 75 341-419 4-79 (259)
35 3r89_A Orotidine 5'-phosphate 99.7 4.1E-18 1.4E-22 168.2 6.5 89 329-418 6-114 (290)
36 3ldv_A Orotidine 5'-phosphate 99.7 2.4E-18 8.4E-23 167.2 3.9 74 341-418 27-100 (255)
37 3ve9_A Orotidine-5'-phosphate 99.7 2E-18 7E-23 163.8 2.9 71 342-418 2-72 (215)
38 3exr_A RMPD (hexulose-6-phosph 99.7 6.8E-18 2.3E-22 160.6 5.4 79 337-418 1-80 (221)
39 4dbe_A Orotidine 5'-phosphate 99.7 6E-18 2.1E-22 161.3 3.8 73 341-419 3-76 (222)
40 1q6o_A Humps, 3-keto-L-gulonat 99.6 4.4E-17 1.5E-21 153.4 2.1 169 85-301 35-212 (216)
41 2fds_A Orotidine-monophosphate 99.6 3.1E-16 1.1E-20 158.5 7.8 92 327-418 19-173 (352)
42 3qw4_B UMP synthase; N-termina 99.6 8.9E-16 3.1E-20 160.2 7.4 87 330-418 5-99 (453)
43 3edh_A Bone morphogenetic prot 99.6 3.4E-16 1.2E-20 147.1 2.6 108 3-115 36-191 (201)
44 3lqb_A Hatching enzyme, LOC792 99.6 8.2E-16 2.8E-20 144.3 3.2 56 57-115 131-191 (199)
45 3n3m_A Orotidine 5'-phosphate 99.6 5.6E-16 1.9E-20 155.8 2.1 141 264-418 26-171 (342)
46 1dbt_A Orotidine 5'-phosphate 99.5 9.2E-15 3.2E-19 140.1 4.8 74 340-417 2-75 (239)
47 2yyu_A Orotidine 5'-phosphate 99.4 3.9E-14 1.3E-18 136.4 5.4 71 342-416 5-75 (246)
48 1eix_A Orotidine 5'-monophosph 99.4 3.2E-14 1.1E-18 137.0 4.3 73 340-416 13-85 (245)
49 1vqt_A Orotidine 5'-phosphate 99.4 2E-13 6.8E-18 129.2 3.1 67 346-418 14-80 (213)
50 2ffc_A Orotidine 5-monophospha 99.3 1.1E-12 3.6E-17 132.7 6.7 61 357-417 119-182 (353)
51 3jr2_A Hexulose-6-phosphate sy 99.3 5.8E-14 2E-18 132.4 -3.8 175 79-302 32-215 (218)
52 1q6o_A Humps, 3-keto-L-gulonat 99.3 1.8E-12 6E-17 121.9 4.7 75 341-418 3-78 (216)
53 2czd_A Orotidine 5'-phosphate 99.2 3.6E-12 1.2E-16 119.2 3.9 72 343-417 1-72 (208)
54 3ajx_A 3-hexulose-6-phosphate 99.2 8.3E-11 2.8E-15 108.9 13.0 170 80-297 27-204 (207)
55 3jr2_A Hexulose-6-phosphate sy 98.9 4.1E-10 1.4E-14 105.9 4.6 74 341-417 6-80 (218)
56 3ajx_A 3-hexulose-6-phosphate 98.9 5.9E-10 2E-14 103.1 5.3 74 343-419 2-77 (207)
57 3ovp_A Ribulose-phosphate 3-ep 98.8 5.9E-09 2E-13 99.4 7.0 53 240-305 170-222 (228)
58 2fli_A Ribulose-phosphate 3-ep 98.8 7E-09 2.4E-13 96.6 6.9 140 113-300 67-218 (220)
59 3f4w_A Putative hexulose 6 pho 98.8 7.4E-08 2.5E-12 89.1 13.2 133 113-301 59-208 (211)
60 3f4w_A Putative hexulose 6 pho 98.4 1.2E-07 4.2E-12 87.7 4.8 76 343-420 2-78 (211)
61 1rpx_A Protein (ribulose-phosp 98.3 7.3E-07 2.5E-11 83.8 6.3 44 242-297 182-225 (230)
62 3inp_A D-ribulose-phosphate 3- 98.1 8.9E-06 3E-10 78.4 10.4 48 238-297 193-241 (246)
63 1tqx_A D-ribulose-5-phosphate 97.9 8E-06 2.7E-10 77.8 5.4 47 242-301 176-222 (227)
64 1h1y_A D-ribulose-5-phosphate 97.7 0.00016 5.4E-09 68.1 10.6 47 242-301 176-222 (228)
65 3ctl_A D-allulose-6-phosphate 97.4 0.00084 2.9E-08 63.9 11.5 44 242-297 170-215 (231)
66 1tqj_A Ribulose-phosphate 3-ep 97.0 0.002 7E-08 60.8 8.9 44 242-297 176-219 (230)
67 3cu2_A Ribulose-5-phosphate 3- 96.9 0.002 6.9E-08 61.5 8.1 43 242-297 190-234 (237)
68 1to3_A Putative aldolase YIHT; 96.8 0.0072 2.5E-07 59.7 11.3 48 237-292 220-271 (304)
69 3glc_A Aldolase LSRF; TIM barr 96.7 0.014 4.8E-07 57.5 12.6 34 263-297 242-275 (295)
70 2fli_A Ribulose-phosphate 3-ep 96.3 0.0035 1.2E-07 57.7 4.9 75 342-419 7-84 (220)
71 1wa3_A 2-keto-3-deoxy-6-phosph 95.8 0.063 2.2E-06 48.8 11.1 46 242-301 153-201 (205)
72 1w8s_A FBP aldolase, fructose- 95.7 0.039 1.3E-06 53.2 9.5 75 214-297 165-249 (263)
73 2qjg_A Putative aldolase MJ040 95.4 0.1 3.6E-06 49.6 11.2 81 212-301 170-258 (273)
74 3o07_A Pyridoxine biosynthesis 94.4 0.028 9.7E-07 54.9 4.1 37 265-303 216-252 (291)
75 2v82_A 2-dehydro-3-deoxy-6-pho 94.2 0.061 2.1E-06 49.2 5.8 51 242-305 151-205 (212)
76 2tps_A Protein (thiamin phosph 93.5 0.081 2.8E-06 48.6 5.3 49 242-303 175-223 (227)
77 3o63_A Probable thiamine-phosp 93.1 0.068 2.3E-06 51.0 4.2 37 263-301 204-240 (243)
78 3qja_A IGPS, indole-3-glycerol 93.0 0.7 2.4E-05 44.7 11.3 32 265-297 229-260 (272)
79 1xi3_A Thiamine phosphate pyro 93.0 0.11 3.8E-06 47.1 5.4 47 242-301 165-211 (215)
80 2zbt_A Pyridoxal biosynthesis 92.8 0.076 2.6E-06 51.4 4.2 34 263-297 223-256 (297)
81 1xm3_A Thiazole biosynthesis p 92.1 0.12 4.2E-06 49.6 4.5 37 264-302 193-229 (264)
82 1yad_A Regulatory protein TENI 92.0 0.16 5.3E-06 46.8 5.1 44 242-297 167-210 (221)
83 1wv2_A Thiazole moeity, thiazo 91.6 0.6 2.1E-05 45.1 8.7 40 262-303 197-239 (265)
84 1i4n_A Indole-3-glycerol phosp 91.0 1 3.5E-05 43.2 9.7 125 128-297 118-248 (251)
85 3nl6_A Thiamine biosynthetic b 90.7 0.11 3.8E-06 55.1 2.9 129 263-405 186-343 (540)
86 1qop_A Tryptophan synthase alp 88.5 1.8 6E-05 41.3 9.3 20 265-285 221-240 (268)
87 2htm_A Thiazole biosynthesis p 87.6 0.55 1.9E-05 45.5 5.0 37 265-303 194-230 (268)
88 3tsm_A IGPS, indole-3-glycerol 87.2 2.2 7.7E-05 41.2 9.1 34 263-297 231-267 (272)
89 2nv1_A Pyridoxal biosynthesis 86.4 0.43 1.5E-05 46.4 3.7 39 264-304 224-262 (305)
90 3fok_A Uncharacterized protein 86.0 0.43 1.5E-05 47.1 3.3 36 261-297 255-293 (307)
91 3r2g_A Inosine 5'-monophosphat 85.3 4.8 0.00016 40.5 10.7 36 241-287 201-236 (361)
92 1jub_A Dihydroorotate dehydrog 85.0 3.8 0.00013 39.4 9.6 44 262-308 252-297 (311)
93 3ovp_A Ribulose-phosphate 3-ep 84.8 0.54 1.8E-05 44.2 3.3 74 342-419 8-87 (228)
94 2yzr_A Pyridoxal biosynthesis 84.4 0.45 1.5E-05 47.5 2.6 36 265-302 258-293 (330)
95 4adt_A Pyridoxine biosynthetic 84.2 0.46 1.6E-05 46.7 2.6 41 264-306 224-264 (297)
96 3i65_A Dihydroorotate dehydrog 84.2 8.9 0.0003 39.3 12.3 40 265-308 361-400 (415)
97 3hgj_A Chromate reductase; TIM 80.4 3.1 0.00011 41.2 7.1 24 265-289 304-328 (349)
98 2ekc_A AQ_1548, tryptophan syn 80.3 4.2 0.00014 38.6 7.7 34 263-297 217-254 (262)
99 1yxy_A Putative N-acetylmannos 79.8 0.93 3.2E-05 41.8 2.8 31 263-297 200-230 (234)
100 3ceu_A Thiamine phosphate pyro 79.1 0.68 2.3E-05 42.5 1.6 48 242-303 147-194 (210)
101 1geq_A Tryptophan synthase alp 76.9 0.49 1.7E-05 44.1 -0.1 49 242-303 194-244 (248)
102 2r14_A Morphinone reductase; H 76.2 9 0.00031 38.5 9.1 26 264-290 313-339 (377)
103 1tv5_A Dhodehase, dihydroorota 76.2 30 0.001 35.6 13.1 40 265-308 389-428 (443)
104 1vyr_A Pentaerythritol tetrani 74.9 12 0.0004 37.3 9.5 26 264-290 308-334 (364)
105 3l5l_A Xenobiotic reductase A; 74.8 5 0.00017 40.0 6.8 25 265-290 311-336 (363)
106 1vc4_A Indole-3-glycerol phosp 73.8 2.1 7.2E-05 40.8 3.5 33 263-296 219-253 (254)
107 2gou_A Oxidoreductase, FMN-bin 73.5 9.8 0.00034 37.9 8.5 26 264-290 307-333 (365)
108 1y0e_A Putative N-acetylmannos 73.5 1.9 6.5E-05 39.3 3.0 31 263-297 189-219 (223)
109 1z41_A YQJM, probable NADH-dep 73.2 5.4 0.00018 39.2 6.4 25 265-290 293-318 (338)
110 3igs_A N-acetylmannosamine-6-p 70.9 36 0.0012 31.6 11.3 29 265-297 197-225 (232)
111 1f76_A Dihydroorotate dehydrog 70.7 25 0.00085 34.1 10.6 24 264-289 304-327 (336)
112 1jcn_A Inosine monophosphate d 70.4 25 0.00086 36.3 11.1 24 263-287 372-395 (514)
113 1rpx_A Protein (ribulose-phosp 69.7 4 0.00014 37.4 4.3 72 343-419 15-91 (230)
114 3zwt_A Dihydroorotate dehydrog 69.7 68 0.0023 31.9 13.7 42 263-308 309-353 (367)
115 3edh_A Bone morphogenetic prot 69.1 1.8 6E-05 40.0 1.7 18 37-54 6-23 (201)
116 2h6r_A Triosephosphate isomera 68.8 1.4 4.7E-05 40.9 1.0 31 266-297 187-217 (219)
117 1ps9_A 2,4-dienoyl-COA reducta 66.8 12 0.00042 39.9 8.0 27 265-292 296-323 (671)
118 1thf_D HISF protein; thermophI 65.3 3.7 0.00013 38.0 3.2 34 263-297 209-243 (253)
119 3gr7_A NADPH dehydrogenase; fl 64.1 11 0.00036 37.3 6.4 24 265-289 293-317 (340)
120 3gka_A N-ethylmaleimide reduct 63.4 23 0.0008 35.3 8.8 25 264-289 301-326 (361)
121 3q58_A N-acetylmannosamine-6-p 62.8 54 0.0018 30.3 10.7 29 265-297 197-225 (229)
122 3aty_A Tcoye, prostaglandin F2 62.1 35 0.0012 34.1 9.9 24 265-289 322-346 (379)
123 1h5y_A HISF; histidine biosynt 61.7 3.8 0.00013 37.3 2.5 31 263-294 212-242 (253)
124 3vnd_A TSA, tryptophan synthas 60.9 36 0.0012 32.5 9.3 21 263-284 217-240 (267)
125 3bo9_A Putative nitroalkan dio 59.8 26 0.00087 34.2 8.2 33 263-297 190-222 (326)
126 1icp_A OPR1, 12-oxophytodienoa 59.5 50 0.0017 32.9 10.5 25 264-289 315-340 (376)
127 3k30_A Histamine dehydrogenase 59.2 33 0.0011 36.6 9.7 62 342-404 393-466 (690)
128 2yw3_A 4-hydroxy-2-oxoglutarat 57.1 7.3 0.00025 35.7 3.5 41 243-296 155-198 (207)
129 3nav_A Tryptophan synthase alp 56.7 62 0.0021 30.9 10.1 21 263-284 219-242 (271)
130 2z6i_A Trans-2-enoyl-ACP reduc 55.9 50 0.0017 32.0 9.6 24 264-288 177-200 (332)
131 2e6f_A Dihydroorotate dehydrog 53.7 8.5 0.00029 37.0 3.5 42 263-308 255-299 (314)
132 1ep3_A Dihydroorotate dehydrog 53.6 10 0.00035 36.1 4.0 39 265-308 257-295 (311)
133 1rd5_A Tryptophan synthase alp 53.0 7.1 0.00024 36.6 2.8 33 263-296 215-251 (262)
134 3inp_A D-ribulose-phosphate 3- 52.7 13 0.00046 35.1 4.7 75 343-419 32-109 (246)
135 1eep_A Inosine 5'-monophosphat 52.6 50 0.0017 32.9 9.2 24 263-287 270-293 (404)
136 2c6q_A GMP reductase 2; TIM ba 52.2 89 0.003 30.8 10.8 22 263-285 237-258 (351)
137 1bwv_A Rubisco, protein (ribul 51.7 22 0.00077 37.1 6.5 118 278-406 174-306 (493)
138 2w6r_A Imidazole glycerol phos 51.7 6.3 0.00021 36.7 2.2 32 264-296 215-246 (266)
139 3tr9_A Dihydropteroate synthas 50.0 34 0.0012 33.7 7.2 20 260-280 44-70 (314)
140 1pii_A N-(5'phosphoribosyl)ant 50.0 50 0.0017 34.0 8.8 201 129-390 126-347 (452)
141 3tdn_A FLR symmetric alpha-bet 49.7 3.5 0.00012 38.3 0.0 30 265-295 216-245 (247)
142 3usb_A Inosine-5'-monophosphat 48.8 1.4E+02 0.0047 31.0 12.0 35 242-287 362-396 (511)
143 3khj_A Inosine-5-monophosphate 48.3 1.7E+02 0.0059 28.9 12.2 24 263-287 221-244 (361)
144 4ab4_A Xenobiotic reductase B; 48.1 39 0.0013 33.7 7.4 25 264-289 293-318 (362)
145 1ypf_A GMP reductase; GUAC, pu 47.0 2E+02 0.0068 27.8 12.3 23 263-286 224-246 (336)
146 2h9a_B CO dehydrogenase/acetyl 46.8 53 0.0018 32.1 8.0 61 342-409 151-214 (310)
147 4avf_A Inosine-5'-monophosphat 46.3 1.7E+02 0.0059 30.0 12.3 24 263-287 346-369 (490)
148 1ka9_F Imidazole glycerol phos 46.2 12 0.00041 34.4 3.1 29 264-293 211-240 (252)
149 3iv3_A Tagatose 1,6-diphosphat 45.3 1.3E+02 0.0045 29.7 10.6 41 237-286 244-287 (332)
150 1tx2_A DHPS, dihydropteroate s 44.8 49 0.0017 32.1 7.4 119 267-404 72-206 (297)
151 4fo4_A Inosine 5'-monophosphat 44.7 1.2E+02 0.0042 30.1 10.5 24 263-287 225-248 (366)
152 1qwg_A PSL synthase;, (2R)-pho 44.5 15 0.0005 35.2 3.5 55 351-405 23-77 (251)
153 4a3u_A NCR, NADH\:flavin oxido 43.1 84 0.0029 31.0 9.0 25 264-289 300-325 (358)
154 1zfj_A Inosine monophosphate d 42.7 1.7E+02 0.0057 29.7 11.5 33 242-285 339-371 (491)
155 4fxs_A Inosine-5'-monophosphat 42.5 1.3E+02 0.0044 31.0 10.6 23 264-287 349-371 (496)
156 3kru_A NADH:flavin oxidoreduct 42.1 39 0.0013 33.4 6.3 25 265-290 293-318 (343)
157 1vcf_A Isopentenyl-diphosphate 41.8 50 0.0017 32.0 7.0 21 264-285 271-291 (332)
158 3na8_A Putative dihydrodipicol 40.7 90 0.0031 30.2 8.6 111 242-370 94-208 (315)
159 1aj0_A DHPS, dihydropteroate s 39.7 64 0.0022 31.0 7.3 11 270-280 49-59 (282)
160 3d0c_A Dihydrodipicolinate syn 39.3 79 0.0027 30.6 7.9 43 242-290 82-124 (314)
161 1vrd_A Inosine-5'-monophosphat 37.9 1.6E+02 0.0055 29.9 10.4 21 263-284 354-374 (494)
162 2vp8_A Dihydropteroate synthas 37.3 80 0.0028 31.0 7.6 49 343-401 117-165 (318)
163 4f0h_A Ribulose bisphosphate c 37.0 45 0.0015 34.9 6.0 118 278-406 174-306 (493)
164 4ao9_A Beta-phenylalanine amin 36.2 63 0.0021 33.1 6.9 57 346-403 200-261 (454)
165 3qze_A DHDPS, dihydrodipicolin 36.1 1.2E+02 0.0042 29.2 8.7 109 242-370 93-206 (314)
166 3tak_A DHDPS, dihydrodipicolin 35.8 1.2E+02 0.004 28.9 8.5 110 242-370 71-184 (291)
167 1p4c_A L(+)-mandelate dehydrog 34.8 40 0.0014 33.6 5.1 34 241-285 280-313 (380)
168 3b0p_A TRNA-dihydrouridine syn 34.7 1.6E+02 0.0053 28.8 9.4 23 263-287 208-233 (350)
169 2ehh_A DHDPS, dihydrodipicolin 34.5 1.6E+02 0.0053 28.0 9.1 110 242-370 70-184 (294)
170 2nzl_A Hydroxyacid oxidase 1; 34.1 51 0.0017 33.1 5.8 60 213-285 265-342 (392)
171 1vl6_A Malate oxidoreductase; 33.8 65 0.0022 32.6 6.5 65 344-417 112-177 (388)
172 3flu_A DHDPS, dihydrodipicolin 33.5 1.3E+02 0.0045 28.6 8.5 114 242-375 77-194 (297)
173 4a29_A Engineered retro-aldol 33.3 34 0.0012 32.8 4.0 114 131-290 124-244 (258)
174 3si9_A DHDPS, dihydrodipicolin 33.2 1E+02 0.0035 29.8 7.7 111 242-370 92-206 (315)
175 3sgz_A Hydroxyacid oxidase 2; 32.9 55 0.0019 32.6 5.7 59 214-285 231-307 (352)
176 3kdn_A Rubisco, ribulose bisph 32.2 36 0.0012 35.1 4.3 130 278-425 153-297 (444)
177 1qpo_A Quinolinate acid phosph 31.7 30 0.001 33.4 3.4 34 241-286 243-276 (284)
178 2jsd_A Matrix metalloproteinas 31.3 21 0.00071 30.9 2.0 14 39-52 3-16 (160)
179 2nli_A Lactate oxidase; flavoe 30.2 67 0.0023 31.9 5.8 61 212-285 241-319 (368)
180 1eye_A DHPS 1, dihydropteroate 29.8 1E+02 0.0035 29.6 6.9 48 344-401 81-129 (280)
181 3h5d_A DHDPS, dihydrodipicolin 29.5 2.9E+02 0.0099 26.5 10.2 109 242-370 77-190 (311)
182 4djd_D C/Fe-SP, corrinoid/iron 29.3 1.4E+02 0.0047 29.4 7.8 66 342-414 158-226 (323)
183 1f6k_A N-acetylneuraminate lya 28.6 69 0.0024 30.6 5.5 44 242-290 74-117 (293)
184 1xky_A Dihydrodipicolinate syn 28.5 1.9E+02 0.0066 27.6 8.7 109 242-370 82-195 (301)
185 3mcm_A 2-amino-4-hydroxy-6-hyd 26.8 2E+02 0.0069 29.5 8.8 60 343-413 269-331 (442)
186 1vzw_A Phosphoribosyl isomeras 26.6 20 0.00068 32.8 1.1 31 263-294 204-237 (244)
187 2d69_A Ribulose bisphosphate c 25.1 45 0.0015 34.2 3.5 118 279-406 151-282 (430)
188 3cpr_A Dihydrodipicolinate syn 24.9 51 0.0017 31.8 3.7 43 242-289 86-128 (304)
189 2v9d_A YAGE; dihydrodipicolini 24.9 1.6E+02 0.0055 28.8 7.5 110 242-370 101-218 (343)
190 3b4u_A Dihydrodipicolinate syn 24.8 66 0.0023 30.8 4.5 44 242-290 73-117 (294)
191 2dqw_A Dihydropteroate synthas 24.5 88 0.003 30.3 5.4 48 344-401 104-151 (294)
192 2y88_A Phosphoribosyl isomeras 24.3 22 0.00075 32.4 1.0 31 263-294 207-240 (244)
193 3l21_A DHDPS, dihydrodipicolin 23.9 53 0.0018 31.7 3.6 100 242-360 85-188 (304)
194 1y0e_A Putative N-acetylmannos 23.4 3.8E+02 0.013 23.5 10.9 69 347-419 123-197 (223)
195 1p0k_A Isopentenyl-diphosphate 23.4 33 0.0011 33.4 2.1 23 263-285 262-286 (349)
196 2dvt_A Thermophilic reversible 23.1 1.4E+02 0.0049 27.7 6.5 56 347-402 100-164 (327)
197 3s5o_A 4-hydroxy-2-oxoglutarat 22.8 3.3E+02 0.011 26.0 9.1 115 242-374 84-203 (307)
198 4e38_A Keto-hydroxyglutarate-a 22.8 3.1E+02 0.01 25.5 8.6 105 114-276 40-151 (232)
199 2vc6_A MOSA, dihydrodipicolina 22.6 1.8E+02 0.0062 27.6 7.2 114 242-375 70-188 (292)
200 2vef_A Dihydropteroate synthas 22.5 1.4E+02 0.0047 29.1 6.4 49 343-401 85-134 (314)
201 2r8w_A AGR_C_1641P; APC7498, d 22.5 65 0.0022 31.5 4.0 44 242-290 104-147 (332)
202 2egz_A 3-dehydroquinate dehydr 22.4 2.1E+02 0.0072 26.1 7.3 56 344-401 3-58 (219)
203 3eb2_A Putative dihydrodipicol 22.2 90 0.0031 29.9 4.9 111 243-370 75-187 (300)
204 1qo2_A Molecule: N-((5-phospho 21.8 32 0.0011 31.4 1.5 24 272-295 215-239 (241)
205 3e96_A Dihydrodipicolinate syn 21.8 68 0.0023 31.0 4.0 48 242-295 82-129 (316)
206 2a9f_A Putative malic enzyme ( 21.7 1.1E+02 0.0037 31.1 5.5 63 344-415 108-171 (398)
207 2rfg_A Dihydrodipicolinate syn 21.4 56 0.0019 31.3 3.3 45 242-291 70-114 (297)
208 2d69_A Ribulose bisphosphate c 21.2 4.6E+02 0.016 26.7 10.2 39 265-304 357-397 (430)
209 3usb_A Inosine-5'-monophosphat 21.2 3.6E+02 0.012 27.8 9.5 74 344-421 299-383 (511)
210 1h5y_A HISF; histidine biosynt 21.1 2.5E+02 0.0086 24.8 7.5 21 264-285 92-112 (253)
211 2y5s_A DHPS, dihydropteroate s 21.1 1.7E+02 0.0059 28.2 6.7 47 344-401 98-145 (294)
212 2r91_A 2-keto-3-deoxy-(6-phosp 20.2 84 0.0029 29.8 4.2 42 244-290 67-109 (286)
213 3bw2_A 2-nitropropane dioxygen 20.1 30 0.001 34.1 1.0 26 264-290 223-248 (369)
214 2yxg_A DHDPS, dihydrodipicolin 20.1 61 0.0021 30.9 3.2 44 242-290 70-113 (289)
No 1
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=100.00 E-value=2.3e-45 Score=359.21 Aligned_cols=205 Identities=29% Similarity=0.534 Sum_probs=170.0
Q ss_pred ccceecccchhhhccCCCc-cccccchhchhhhHHHh-hhcccCHHHHHHHHHH----HhccccceEEEcccCCchhHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDD-TIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFR----LIGEWAHLVTVHSIAGPGPLQE 150 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~-Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~----~~~~~~d~vTvH~~~G~~ml~~ 150 (434)
++-.+.+-|...|...|.. .+.......++.++.+| |+|++||||||..+++ .+..|+|++|||+++|.+||++
T Consensus 53 ~~v~~~KvG~~l~~~~G~~~~v~~L~~l~~~~g~~IflDlK~~DIpnTv~~~y~~a~~~~~~~ad~vTVH~~~G~~~~~a 132 (267)
T 3gdm_A 53 PKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRRFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSG 132 (267)
T ss_dssp GGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHHHSTTTCHHHHCSEEEEEGGGCTHHHHH
T ss_pred CcCcEEEECHHHHHhcCHHHHHHHHHHHHhhcCCeEEEEeccccchHHHHHHHHHHHHHHHhhCCEEEEeccCCHHHHHH
Confidence 4556777778888777766 65444333333466677 9999999999998765 3445799999999999999999
Q ss_pred HHHHhhhhCC-CCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEe
Q psy4093 151 IQRISDELGE-DRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVC 229 (434)
Q Consensus 151 a~~~~~~~~~-~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVc 229 (434)
+++++.+.+. .+++++|++|||++++....+. +.|+++|+++++|++||||
T Consensus 133 a~~~a~~~~~~~~~lllla~mss~~~l~~~~~~----------------------------~~v~~~A~~a~~g~dGvV~ 184 (267)
T 3gdm_A 133 LKQAAEEVTKEPRGLLMLAELSCKGSLATGEYT----------------------------KGTVDIAKSDKDFVIGFIA 184 (267)
T ss_dssp HHHHHHHHCCSCCEEEEECSCCSTTCCCCHHHH----------------------------HHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHhhcccCCCeEEEEEcCCccccccCCHH----------------------------HHHHHHHHHHhcCCCeEEe
Confidence 9998876511 1679999999998777544442 4899999999889999999
Q ss_pred Cccchh-hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccC-CCCHHHHHHHHHHHHHHHHHHHH
Q psy4093 230 QAPSVL-ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQ-APDPVEAARRYKEVMWEAYEQRL 307 (434)
Q Consensus 230 s~~e~~-~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~-A~DP~~aa~~i~~~~~~a~~~~~ 307 (434)
|+++.. .++++|++||||||++..|++.|||++||++|+ ++||||||||||||+ |+||++++++|+++.|+||++|+
T Consensus 185 s~~~~~~~~g~~f~~vTPGIr~~~~g~~~gdQ~rTP~~Ai-~~GaD~iVVGRpI~~~a~dP~~aa~~i~~~~w~ay~~~~ 263 (267)
T 3gdm_A 185 QRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRC 263 (267)
T ss_dssp SSCCCCGGGTCCCEEEECSEECCCTTCTTGGGSEEHHHHH-HTTCSEEEECGGGTSTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CccchhhccCCCCEEECCCcCCCcCCCccccCCCCHHHHH-HcCCCEEEEChhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 998874 789999999999999756899999999999999 999999999999999 99999999999999999999999
Q ss_pred hhc
Q psy4093 308 KKE 310 (434)
Q Consensus 308 ~~~ 310 (434)
.++
T Consensus 264 ~~~ 266 (267)
T 3gdm_A 264 GQQ 266 (267)
T ss_dssp ---
T ss_pred hcc
Confidence 754
No 2
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=100.00 E-value=7.4e-43 Score=347.27 Aligned_cols=200 Identities=36% Similarity=0.613 Sum_probs=164.6
Q ss_pred ccceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHH----HhccccceEEEcccCCchhHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFR----LIGEWAHLVTVHSIAGPGPLQEI 151 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~----~~~~~~d~vTvH~~~G~~ml~~a 151 (434)
+|-.+.+-|...|...|...+.......+..++.+| |+|++||||||..+++ .+..|+|++|||+++|.+||+++
T Consensus 107 ~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~IflDlK~~DIpnTv~~a~~~a~~~~a~~aD~vTVHa~~G~~~m~aa 186 (312)
T 3g3d_A 107 PSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGL 186 (312)
T ss_dssp GGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHHCTTTCHHHHCSEEEEESTTCTHHHHHH
T ss_pred CCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEEEECcccccHHHHHHHHHHHHHhhhccCCEEEEccCCCHHHHHHH
Confidence 345667777777776675555443333233456667 9999999999999887 33357999999999999999999
Q ss_pred HHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCc
Q psy4093 152 QRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQA 231 (434)
Q Consensus 152 ~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~ 231 (434)
+++..+.+ .++++||+|++++++....+. +.|+++|+++..|++|||||+
T Consensus 187 ~e~~~~~~--~gV~vLtsms~~g~l~~~~~~----------------------------~~V~~lA~~~~~gldGvVcs~ 236 (312)
T 3g3d_A 187 QEVGLPLH--RGCLLIAEMSSTGSLATGDYT----------------------------RAAVRMAEEHSEFVVGFISGS 236 (312)
T ss_dssp HHHHTTTT--CEEEEECCCSSTTCCCCHHHH----------------------------HHHHHHHHHTTTTEEEEECSS
T ss_pred HHhhhhcC--CeEEEEEecCCccccccCCHH----------------------------HHHHHHHHhhhCCCCeEEeCh
Confidence 99865444 679999999987766544443 488999999766899999999
Q ss_pred cchhhcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 232 PSVLASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 232 ~e~~~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
|+ .++++|++|||||||+..+++.|||++||++|++++||||||||||||+|+||++++++|+++.|+||++|+.
T Consensus 237 -e~-~~~~dfl~vTPGIrp~~~~~~~g~qv~TP~~Ai~~~GaD~iVVGRpIt~A~dP~~aa~~i~~~~w~ay~~~~~ 311 (312)
T 3g3d_A 237 -RV-SMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRLG 311 (312)
T ss_dssp -CC-CCCTTSEEEECSBCSSSEECTTSCEEBCHHHHHHTTCCSEEEESHHHHTSSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred -hh-ccCCCeEEEcCCcCCCcCCCCcCCcccCHHHHHHhCCCCEEEEChhhcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 55 4789999999999998555788999999999997799999999999999999999999999999999999985
No 3
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=100.00 E-value=9.8e-42 Score=332.46 Aligned_cols=199 Identities=36% Similarity=0.619 Sum_probs=161.0
Q ss_pred cceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHH----HhccccceEEEcccCCchhHHHHH
Q psy4093 78 FDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFR----LIGEWAHLVTVHSIAGPGPLQEIQ 152 (434)
Q Consensus 78 y~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~----~~~~~~d~vTvH~~~G~~ml~~a~ 152 (434)
+-.+.+-|...|...|...+.......+..++.+| |+|++||||||..+++ .+..|+|++|||+++|.+||++++
T Consensus 56 ~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~VflDlK~~DIpnTv~~a~~~a~~~~~~~ad~vTVha~~G~~~~~aa~ 135 (260)
T 3eww_A 56 SICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQ 135 (260)
T ss_dssp GCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHHCTTTCGGGTCSEEEEESTTCTHHHHHHH
T ss_pred CceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEEEEeeccccHHHHHHHHHHHHHhhhccCCEEEEeCCCCHHHHHHHH
Confidence 44566666666666665444333232223456667 9999999999999886 444589999999999999999999
Q ss_pred HHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCcc
Q psy4093 153 RISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAP 232 (434)
Q Consensus 153 ~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~ 232 (434)
++..+.+ .++++||+|++++++....+. +.|+++|+++..|++|||||+
T Consensus 136 ~~~~~~~--~gv~vLtsms~~g~l~~~~~~----------------------------e~v~~~A~~~~~g~dGvV~s~- 184 (260)
T 3eww_A 136 EVGLPLH--RGCLLIAEMSSTGSLATGDYT----------------------------RAAVRMAEEHSEFVVGFISGS- 184 (260)
T ss_dssp HHHTTTT--CEEEEECCCCSTTCCCCTHHH----------------------------HHHHHHHHHTTTTEEEEECSS-
T ss_pred HhhcccC--CeEEEEEEcCCchhcccCCHH----------------------------HHHHHHHHhccCCCceEEeCh-
Confidence 9865444 678999998887666543332 489999999655899999999
Q ss_pred chhhcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 233 SVLASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 233 e~~~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
|+ .++++|++|||||||+..+++.|+|++||.+|++++|||+||||||||+|+||.+++++|++..|+||++|+.
T Consensus 185 ~~-~~~~~f~~vTPGIr~~~~~~~~~~r~~tp~~a~~~aGad~iVvGR~I~~a~dp~~a~~~~~~~~w~ay~~~~~ 259 (260)
T 3eww_A 185 RV-SMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRLG 259 (260)
T ss_dssp CC-CCCTTSEEEECSBCSSSEECTTSCEEBCHHHHHTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred hh-ccCCCcEEECCCcCCCCCCCccCCCccCHHHHHHhcCCCEEEEChhhcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 44 4789999999999998555778888999999996799999999999999999999999999999999999985
No 4
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=100.00 E-value=1e-37 Score=304.06 Aligned_cols=201 Identities=23% Similarity=0.258 Sum_probs=153.3
Q ss_pred ccc-eecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHH
Q psy4093 77 DFD-SVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQR 153 (434)
Q Consensus 77 Dy~-SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~ 153 (434)
++- .+.+-|...|...|...+..... .++.+| |+|++|||||+..+++.+.+ |+|++|||+++|.+||+++++
T Consensus 28 ~~v~~~~KvG~~l~~~~G~~~v~~Lk~----~g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~G~~~~~aa~~ 103 (259)
T 3tfx_A 28 DPHDVFVKVGMELFYNAGIDVIKKLTQ----QGYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALGGSQMIKSAKD 103 (259)
T ss_dssp CGGGCEEEECHHHHHHHCHHHHHHHHH----TTCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHH
T ss_pred cccceEEEeCHHHHHhcCHHHHHHHHH----CCCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHH
Confidence 344 66777777777666554433322 234556 99999999999999998888 699999999999999999999
Q ss_pred Hhhhh---CC-CCceEEEEEeCCCCCCChHHHH-hhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceE
Q psy4093 154 ISDEL---GE-DRGVFLIAQLSCQGNLIDEKYT-QVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGL 227 (434)
Q Consensus 154 ~~~~~---~~-~~~v~~v~~lss~~sl~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~Gv 227 (434)
++.+. |. ...+++||+|||. +++++. ++|+...+ .+.|+++|+++.+ |++||
T Consensus 104 ~~~~~~~~g~~~~~li~Vt~lTS~---~~~~l~~~~g~~~~~-------------------~e~v~~~A~~a~~~G~dGv 161 (259)
T 3tfx_A 104 GLIAGTPAGHSVPKLLAVTELTSI---SDDVLRNEQNCRLPM-------------------AEQVLSLAKMAKHSGADGV 161 (259)
T ss_dssp HHHHHSCTTSCCCEEEEECSCTTC---CHHHHHHTSCBSSCH-------------------HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHhcccCCCCceEEEEEEeCCC---CHHHHHHHhCCCCCH-------------------HHHHHHHHHHHHHhCCCEE
Confidence 87643 21 1358889999984 556663 44444321 3578888888877 89999
Q ss_pred EeCccchh----hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 228 VCQAPSVL----ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 228 Vcs~~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
|||++|+. .++++|++||||||++ |++.||| ++||.+|+ ++|||+|||||+|++|+||.+++++|++ +|+
T Consensus 162 V~s~~e~~~ir~~~~~~f~~vtPGIr~~--g~~~gDQ~Rv~T~~~a~-~aGad~iVvGr~I~~a~dp~~a~~~i~~-~~~ 237 (259)
T 3tfx_A 162 ICSPLEVKKLHENIGDDFLYVTPGIRPA--GNAKDDQSRVATPKMAK-EWGSSAIVVGRPITLASDPKAAYEAIKK-EFN 237 (259)
T ss_dssp ECCGGGHHHHHHHHCSSSEEEECCCCCC-------------CHHHHH-HTTCSEEEECHHHHTSSSHHHHHHHHHH-HHT
T ss_pred EECHHHHHHHHhhcCCccEEEcCCcCCC--CCCcCCccccCCHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-HHH
Confidence 99999885 6889999999999998 8888999 58999999 9999999999999999999999999998 688
Q ss_pred HHHHHH
Q psy4093 302 AYEQRL 307 (434)
Q Consensus 302 a~~~~~ 307 (434)
+|+.-.
T Consensus 238 ~~~~~~ 243 (259)
T 3tfx_A 238 AENLYF 243 (259)
T ss_dssp CTTCSC
T ss_pred HHHHHH
Confidence 776544
No 5
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=1.4e-36 Score=293.04 Aligned_cols=191 Identities=23% Similarity=0.332 Sum_probs=140.4
Q ss_pred eecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhccc-cceEEEcccCCchhHHHHHHHhhh
Q psy4093 80 SVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGEW-AHLVTVHSIAGPGPLQEIQRISDE 157 (434)
Q Consensus 80 SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~~-~d~vTvH~~~G~~ml~~a~~~~~~ 157 (434)
.+.+-|...|...|...+.... +.++.+| |+|++|||||+..+++.+.++ +|++|||+++|.+||+++++++.+
T Consensus 35 ~~~Kvg~~lf~~~G~~~v~~L~----~~g~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~~~G~~~~~~a~~~~~~ 110 (239)
T 3tr2_A 35 CHLKIGSILFTRYGPAFVEELM----QKGYRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHISGGRTMMETVVNALQS 110 (239)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHH----HTTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHT
T ss_pred cEEEeCHHHHHhhCHHHHHHHH----hcCCCEEEEecccccchHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHh
Confidence 3444444445444433332221 1234455 999999999999999988885 999999999999999999998865
Q ss_pred hC-C-CCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccch
Q psy4093 158 LG-E-DRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSV 234 (434)
Q Consensus 158 ~~-~-~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~ 234 (434)
.+ . ...+++|++||| ++.+++.++|+.... .+.|+++|+++++ |++|||||++|+
T Consensus 111 ~~~~~~~~l~~Vt~LTS---~~~~~l~~~g~~~~~-------------------~~~v~~~A~~a~~~g~~GvV~s~~e~ 168 (239)
T 3tr2_A 111 ITLKEKPLLIGVTILTS---LDGSDLKTLGIQEKV-------------------PDIVCRMATLAKSAGLDGVVCSAQEA 168 (239)
T ss_dssp CCCSSCCEEEEECSCTT---CCHHHHHHTTCCSCH-------------------HHHHHHHHHHHHHHTCCEEECCHHHH
T ss_pred cCcCCCceEEEEEEEee---CCHHHHHhcCCCCCH-------------------HHHHHHHHHHHHHcCCCEEEECchhH
Confidence 42 1 123666777776 565666555554322 3688889988887 899999999988
Q ss_pred h----hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHH
Q psy4093 235 L----ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMW 300 (434)
Q Consensus 235 ~----~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~ 300 (434)
. .++++|++||||||++ +++.||| ++||.+|+ ++|||+|||||||++|+||.+++++|++ +|
T Consensus 169 ~~ir~~~~~~fl~vtPGIr~~--g~~~~dQ~rv~t~~~~~-~aGad~lVvGr~I~~a~dp~~a~~~i~~-~i 236 (239)
T 3tr2_A 169 ALLRKQFDRNFLLVTPGIRLE--TDEKGDQKRVMTPRAAI-QAGSDYLVIGRPITQSTDPLKALEAIDK-DI 236 (239)
T ss_dssp HHHHTTCCTTSEEEECCBC------------CCBCHHHHH-HHTCSEEEECHHHHTSSSHHHHHHHHHH-HC
T ss_pred HHHHHhcCCCcEEECCCcCCC--CCCcCcccccCCHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-HH
Confidence 5 6788999999999998 8888999 57999999 9999999999999999999999999997 54
No 6
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=100.00 E-value=8e-36 Score=290.11 Aligned_cols=192 Identities=22% Similarity=0.316 Sum_probs=149.8
Q ss_pred cceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHh
Q psy4093 78 FDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRIS 155 (434)
Q Consensus 78 y~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~ 155 (434)
+-.+.+-|...|...|...+..... .++.++ |+|++|||||++.+++.+.+ ++|++|||+++|.+||+++++++
T Consensus 52 ~v~~~KvG~~l~~~~G~~~v~~Lk~----~g~~VflDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~~~G~~~~~~a~~~~ 127 (255)
T 3ldv_A 52 STCRLKVGKEMFTLFGPDFVRELHK----RGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASGGERMMAASREIL 127 (255)
T ss_dssp GGCEEEEEHHHHHHHHHHHHHHHHH----TTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHH
T ss_pred cCcEEEeCHHHHHhhCHHHHHHHHh----cCCCEEEEEecccchhHHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHH
Confidence 3445555666665555444433221 234455 99999999999999998887 79999999999999999999988
Q ss_pred hhhCC-CCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccc
Q psy4093 156 DELGE-DRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPS 233 (434)
Q Consensus 156 ~~~~~-~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e 233 (434)
.+.+. ...++.|++||| ++.+++.++|+.... .+.|+++|+++.+ |++|||||++|
T Consensus 128 ~~~g~~~~~li~VtvLTS---~s~~~l~~~g~~~~~-------------------~~~V~~~A~~a~~aG~~GvV~sa~e 185 (255)
T 3ldv_A 128 EPYGKERPLLIGVTVLTS---MESADLQGIGILSAP-------------------QDHVLRLATLTKNAGLDGVVCSAQE 185 (255)
T ss_dssp GGGGGGSCEEEEECSCTT---CCHHHHHHTTCCSCH-------------------HHHHHHHHHHHHHTTCSEEECCHHH
T ss_pred hhcCCCCceEEEEEEEec---CCHHHHHhcCCCCCH-------------------HHHHHHHHHHHHHcCCCEEEECHHH
Confidence 65431 124566666665 565666665553321 3578888888777 89999999998
Q ss_pred hh----hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHH
Q psy4093 234 VL----ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEV 298 (434)
Q Consensus 234 ~~----~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~ 298 (434)
+. .++++|++||||||++ +++.||| ++||.+|+ ++|||+|||||||++|+||.+++++|+++
T Consensus 186 ~~~iR~~~g~~fl~VtPGIr~q--g~~~~dQ~Rv~t~~~a~-~aGad~iVvGr~I~~a~dp~~a~~~i~~e 253 (255)
T 3ldv_A 186 ASLLKQHLGREFKLVTPGIRPA--GSEQGDQRRIMTPAQAI-ASGSDYLVIGRPITQAAHPEVVLEEINSS 253 (255)
T ss_dssp HHHHHHHHCTTSEEEEECCCCT--TSTTSSCSSSCCHHHHH-HTTCSEEEECHHHHTCSCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEeCCcccC--cCCccceeccCCHHHHH-HcCCCEEEECHHHhCCCCHHHHHHHHHHh
Confidence 85 5789999999999998 7778888 68999999 99999999999999999999999999973
No 7
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.7e-34 Score=286.53 Aligned_cols=193 Identities=18% Similarity=0.255 Sum_probs=143.8
Q ss_pred ceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhh
Q psy4093 79 DSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISD 156 (434)
Q Consensus 79 ~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~ 156 (434)
-.+.+-|...|...|...+..... +.++.++ |+|++|||||+..+++.+++ |+|++|||+++|.+||+++++++.
T Consensus 50 v~~vKVG~~lf~~~G~~~V~~Lk~---~~g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~ 126 (303)
T 3ru6_A 50 DIWLKVGLRAYLRDGFKFIEELKK---VDDFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHASAGKIAIQEVMTRLS 126 (303)
T ss_dssp SCEEEECHHHHHHHTHHHHHHHHH---HCCCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHT
T ss_pred ccEEEeCHHHHHHhCHHHHHHHHH---hhCCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHHHH
Confidence 344555555565555444433211 1134455 99999999999999998888 799999999999999999999886
Q ss_pred hhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccchh
Q psy4093 157 ELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSVL 235 (434)
Q Consensus 157 ~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~~ 235 (434)
+.+....+++|++||| ++.+++.++ +.. ...+.|+++|+++.+ |++|||||++|+.
T Consensus 127 ~~~~~~~llaVtvLTS---~s~~~l~~l-~~~-------------------~~~e~V~~lA~~a~~~G~dGvV~s~~E~~ 183 (303)
T 3ru6_A 127 KFSKRPLVLAVSALTS---FDEENFFSI-YRQ-------------------KIEEAVINFSKISYENGLDGMVCSVFESK 183 (303)
T ss_dssp TSSSCCEEEEECSCTT---CCHHHHHHH-HSS-------------------CHHHHHHHHHHHHHHTTCSEEECCTTTHH
T ss_pred hcCCCceEEEEEEecC---CCHHHHHHH-HcC-------------------CHHHHHHHHHHHHHHcCCCEEEECHHHHH
Confidence 5542124666778887 345555431 111 123678888888777 8999999999885
Q ss_pred ----hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 236 ----ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 236 ----~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
.++++|++||||||++ |++.||| ++||.+|+ ++|||+|||||+|++|+||.+++++|++ +|+
T Consensus 184 ~IR~~~~~~fl~VTPGIr~q--G~~~~DQ~Rv~t~~~a~-~aGAd~iVvGr~I~~a~dp~~a~~~i~~-~i~ 251 (303)
T 3ru6_A 184 KIKEHTSSNFLTLTPGIRPF--GETNDDQKRVANLAMAR-ENLSDYIVVGRPIYKNENPRAVCEKILN-KIH 251 (303)
T ss_dssp HHHHHSCTTSEEEECCCCTT--C--------CCSHHHHH-HTTCSEEEECHHHHTSSCHHHHHHHHHH-HHC
T ss_pred HHHHhCCCccEEECCCcCcc--cCCcccccccCCHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-HHH
Confidence 6788999999999998 8888999 68999999 9999999999999999999999999997 554
No 8
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=100.00 E-value=2.2e-33 Score=267.97 Aligned_cols=182 Identities=21% Similarity=0.248 Sum_probs=143.2
Q ss_pred ccceecccchhhhccCCCccccccchhchhhhH-HHh-hhcccCHHHHHHHHHHHhccccceEEEcccCC-chhHHHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLW-SII-ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAG-PGPLQEIQR 153 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~-si~-dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G-~~ml~~a~~ 153 (434)
+|-.+.+-|...|...|...+...... .++ .+| |+|++|||||+..+++.+.++ |++|||+++| .+||+++++
T Consensus 24 ~~v~~~KvG~~l~~~~G~~~v~~L~~~---~~~~~VflDlK~~DI~nTv~~~~~~~~~~-d~vTVh~~~G~~~~~~~a~~ 99 (222)
T 4dbe_A 24 NELYGIKVGLPLVLDLGVDKTRELLIG---LDVEEIIVDFKLADIGYIMKSIVERLSFA-NSFIAHSFIGVKGSLDELKR 99 (222)
T ss_dssp GGCSEEEEEHHHHHHHCHHHHHHHHHT---CCCSEEEEEEEECSCHHHHHHHHTTCTTC-SEEEEESTTCTTTTHHHHHH
T ss_pred CcCcEEEECHHHHHhhCHHHHHHHHHh---cCCCeEEEEeeecchHHHHHHHHHHHHhC-CEEEEEcCcCcHHHHHHHHH
Confidence 445666777777776675544333221 234 445 999999999999999988888 9999999999 999999999
Q ss_pred HhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccc
Q psy4093 154 ISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPS 233 (434)
Q Consensus 154 ~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e 233 (434)
++.+.+ +++++||.||+++..+.+ .+.++++|+.+ |++|+|||+.+
T Consensus 100 ~~~~~~--~~v~vLts~s~~~~~~~~------------------------------~~~~a~~a~~~--g~~GvV~sat~ 145 (222)
T 4dbe_A 100 YLDANS--KNLYLVAVMSHEGWSTLF------------------------------ADYIKNVIREI--SPKGIVVGGTK 145 (222)
T ss_dssp HHHHTT--CEEEEEEECSSTTCCCTT------------------------------HHHHHHHHHHH--CCSEEEECTTC
T ss_pred HHHhcC--CcEEEEEeCCCcchHHHH------------------------------HHHHHHHHHHh--CCCEEEECCCC
Confidence 987655 678899999886544311 12566677666 69999999744
Q ss_pred ---hh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHH
Q psy4093 234 ---VL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQR 306 (434)
Q Consensus 234 ---~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~ 306 (434)
+. .+++ |++||||||++ +.||++|+ ++||||||||||||+|+||.+++++|++ +|+.+.++
T Consensus 146 p~e~~~ir~~~~~-~~~vtPGI~~~---------g~tp~~a~-~~Gad~iVVGR~I~~A~dP~~aa~~i~~-~i~~~~~~ 213 (222)
T 4dbe_A 146 LDHITQYRRDFEK-MTIVSPGMGSQ---------GGSYGDAV-CAGADYEIIGRSIYNAGNPLTALRTINK-IIEDKVMK 213 (222)
T ss_dssp HHHHHHHHHHCTT-CEEEECCBSTT---------SBCTTHHH-HHTCSEEEECHHHHTSSSHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHhCCC-CEEEcCCcccC---------ccCHHHHH-HcCCCEEEECHHhcCCCCHHHHHHHHHH-HHHHHHHH
Confidence 32 4555 99999999986 24899999 9999999999999999999999999998 88888887
Q ss_pred Hh
Q psy4093 307 LK 308 (434)
Q Consensus 307 ~~ 308 (434)
+.
T Consensus 214 ~~ 215 (222)
T 4dbe_A 214 CK 215 (222)
T ss_dssp C-
T ss_pred hh
Confidence 75
No 9
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=99.97 E-value=1e-31 Score=255.36 Aligned_cols=178 Identities=20% Similarity=0.205 Sum_probs=133.8
Q ss_pred ccceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhccccceEEEcccCC-chhHHHHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAG-PGPLQEIQRI 154 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G-~~ml~~a~~~ 154 (434)
+|-.+.+-|...|...|...+.... +..++.+| |+|++|||||+..+++.+.+++|++|||+++| .+||+++ +
T Consensus 22 ~~v~~~KvG~~l~~~~G~~~v~~L~---~~~g~~VflDlK~~DIpnTv~~a~~~~~~~ad~vTvh~~~G~~~~~~~~-~- 96 (215)
T 3ve9_A 22 GKVAGIKVGWPLLLNLGKEKVKELV---GLVDGIKILDLKLADIDNTMILIVDELKDITNSFIAHAFVGVEGSLASL-S- 96 (215)
T ss_dssp TTSSEEEEEHHHHHHHCHHHHHHHH---TTCCSEEEEEEEECSCHHHHHHHHHHHTTTCSEEEEEGGGCTTTTHHHH-H-
T ss_pred CcCcEEEecHHHHHhhCHHHHHHHH---HhcCCcEEEEecccCchhHHHHHHHHHHHhhheEEEeCCCCcHHHHHhH-h-
Confidence 4445666677777666654442221 11244556 99999999999999998888899999999999 9999998 2
Q ss_pred hhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccc-
Q psy4093 155 SDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPS- 233 (434)
Q Consensus 155 ~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e- 233 (434)
.+ +++++||.|++++.. + + .++.++++|+.+ |++|+|||+.+
T Consensus 97 ---~~--~~v~vLts~s~~~~~--~---~-------------------------~v~~~a~~a~~~--G~~GvV~sat~~ 139 (215)
T 3ve9_A 97 ---QR--VDLFLVLSMSHPGWN--D---A-------------------------FYPYLREVARRV--NPKGFVAPATRP 139 (215)
T ss_dssp ---HH--SEEEEECCCSSTTCC--G---G-------------------------GHHHHHHHHHHH--CCSEEECCTTSH
T ss_pred ---cC--CCEEEEEecCCcchH--H---H-------------------------HHHHHHHHHHHc--CCCceeeCCCCH
Confidence 23 468888887775322 1 1 134566666666 69999999744
Q ss_pred --hh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Q psy4093 234 --VL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRL 307 (434)
Q Consensus 234 --~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~ 307 (434)
+. .+++ |++||||||++ +.||.+|+ ++|||+||||||||+|+||.+++++|++ +|+.+.+++
T Consensus 140 ~e~~~ir~~~~~-f~~v~pGI~~~---------g~~~~~a~-~~Gad~iVvGr~I~~a~dp~~a~~~i~~-~i~~~~~~~ 207 (215)
T 3ve9_A 140 SMISRVKGDFPD-KLVISPGVGTQ---------GAKPGIAL-CHGADYEIVGRSVYQSADPVRKLEEIVR-SQEEVLSSC 207 (215)
T ss_dssp HHHHHHHHHCTT-SEEEECCTTST---------TCCTTHHH-HTTCSEEEECHHHHTSSSHHHHHHHHHH-HHHHHC---
T ss_pred HHHHHHHHhCCC-cEEEcCCCCcC---------cCCHHHHH-HcCCCEEEeCHHHcCCCCHHHHHHHHHH-HHHHHHHHh
Confidence 32 4566 99999999986 45899999 9999999999999999999999999998 888888776
Q ss_pred h
Q psy4093 308 K 308 (434)
Q Consensus 308 ~ 308 (434)
.
T Consensus 208 ~ 208 (215)
T 3ve9_A 208 E 208 (215)
T ss_dssp -
T ss_pred h
Confidence 5
No 10
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=99.97 E-value=5.7e-31 Score=256.08 Aligned_cols=192 Identities=19% Similarity=0.147 Sum_probs=139.6
Q ss_pred ccceecccchhhhccCCCccccccchhch--hhhHHHh-hhcccCHHHHHHHHHHHhc-cc-cceEEEcccCCchhHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFVMAQ--NVLWSII-ILKLADIGAAVGHQFRLIG-EW-AHLVTVHSIAGPGPLQEI 151 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~igq--r~~~si~-dlKl~DI~nTv~~~~~~~~-~~-~d~vTvH~~~G~~ml~~a 151 (434)
||-.+.+-+...|...|...+.....+-+ +.++.+| |+|++|||||+..+++.+. .+ +|++|||+++|.+||+++
T Consensus 43 ~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~~~G~~~l~~~ 122 (255)
T 3qw3_A 43 EYAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASPYMGSDSLQPF 122 (255)
T ss_dssp GGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSCTTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTCHHHHHHH
T ss_pred CcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhcCCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcccCCHHHHHHH
Confidence 45566777777787777432211111101 1334455 9999999999999998875 45 999999999999999999
Q ss_pred HHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhh-cCC-CCceEEe
Q psy4093 152 QRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQS-FPG-LIAGLVC 229 (434)
Q Consensus 152 ~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~-a~~-gv~GvVc 229 (434)
++.. + +++++|+.||++++.+.+ ++|+... ...+.|+++|+. +.+ |++|+||
T Consensus 123 ~~~~---~--~gv~vL~~tS~~~~~~~q---~~~~~~~------------------~~~~~V~~~a~~~~~~~g~~GvV~ 176 (255)
T 3qw3_A 123 MRYP---D--KAVFVLCKTSNKGSNDLQ---CLRVGDR------------------YLYEAVAERAEGPWNVNGNVGLVV 176 (255)
T ss_dssp HTCT---T--SEEEEEEECCSGGGGTTT---TSEETTE------------------EHHHHHHHHHHTGGGGGSCEEEEE
T ss_pred HHhh---C--CceEEEEeCCCccHHHHH---hcccCCC------------------CHHHHHHHHHHHHhhhhCCeEEEE
Confidence 9753 3 679999999986544322 2222110 124789999999 766 8999999
Q ss_pred Cc---cchh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCC----E--EEeCCcccCCCCHHHHHHHHH
Q psy4093 230 QA---PSVL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGAD----L--GVVGRGITQAPDPVEAARRYK 296 (434)
Q Consensus 230 s~---~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD----~--IVVGR~It~A~DP~~aa~~i~ 296 (434)
|+ +|+. .+++.| ++|||||++ +.||++|+ ++|+| + ||||||||+|+||.+++++|+
T Consensus 177 ~at~~~e~~~ir~~~~~~~-~l~PGIg~q---------g~tp~~a~-~~G~d~~~~~~livvGR~I~~A~dp~~aa~~i~ 245 (255)
T 3qw3_A 177 GATDPVALARVRARAPTLW-FLVPGIGAQ---------GGSLKASL-DAGLRADGSGMLINVSRGLARAADPRAAAKELC 245 (255)
T ss_dssp CSSCHHHHHHHHHHCSSCC-EEECCC--------------CHHHHH-HHHCCTTSCCEEEEESHHHHTSSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCCe-EEECCcCCC---------CCCHHHHH-HcCCCcccCeeEEEeChhhcCCCCHHHHHHHHH
Confidence 95 4664 456665 689999986 45999999 89999 4 999999999999999999999
Q ss_pred HHHHHHHHHH
Q psy4093 297 EVMWEAYEQR 306 (434)
Q Consensus 297 ~~~~~a~~~~ 306 (434)
+ +|++++++
T Consensus 246 ~-~i~~~~~~ 254 (255)
T 3qw3_A 246 E-EINAIRFA 254 (255)
T ss_dssp H-HHHHHHHC
T ss_pred H-HHHHHHhc
Confidence 8 88887753
No 11
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=99.96 E-value=2.9e-30 Score=259.56 Aligned_cols=204 Identities=18% Similarity=0.164 Sum_probs=144.6
Q ss_pred cccceecccchhhhccCCCccccccc---hhchhhhHHHh-hhcccCHHHHHHHHHHHh-ccc-cceEEEcccCCchhHH
Q psy4093 76 YDFDSVMHYSRKAFSKNGDDTIVPHF---VMAQNVLWSII-ILKLADIGAAVGHQFRLI-GEW-AHLVTVHSIAGPGPLQ 149 (434)
Q Consensus 76 YDy~SVMhYg~~aFs~~g~~Ti~~~~---~igqr~~~si~-dlKl~DI~nTv~~~~~~~-~~~-~d~vTvH~~~G~~ml~ 149 (434)
.||-.+.+-|...|...|...+.... ..-+..++.+| |+|++|||||+..+++.+ ..+ +|++|||+++|.+||+
T Consensus 114 ~~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DIpnTv~~ya~~~~~~lgaD~vTVh~~~G~~~l~ 193 (342)
T 3n3m_A 114 NKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDIGNTVKNYRKFIFEYLKSDSCTVNIYMGTNMLK 193 (342)
T ss_dssp GGGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTCSGGGG
T ss_pred cCcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCcHHHHHHHHHHHHHhcCCCEEEEcccCCHHHHH
Confidence 35667777777777776644331111 11112344555 999999999999998876 554 9999999999999999
Q ss_pred HH-HHHhhhhCCCCceEEEEEeCCCCCCChHHHHh-hcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHh---hcCC-C
Q psy4093 150 EI-QRISDELGEDRGVFLIAQLSCQGNLIDEKYTQ-VGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQ---SFPG-L 223 (434)
Q Consensus 150 ~a-~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~---~a~~-g 223 (434)
++ ++++.+.+ +++|+||+|||+++ .++++ .|....+. .....+.+.++|+ .+.+ |
T Consensus 194 ~a~~~~~~~~~--~~v~vvt~tSs~~~---~dlq~~~~~~~~~l--------------y~~V~~~a~~~a~~~~~a~~~G 254 (342)
T 3n3m_A 194 DICYDEEKNKY--YSAFVLVKTTNPDS---AIFQKNLSLDNKQA--------------YVIMAQEALNMSSYLNLEQNNE 254 (342)
T ss_dssp GTSEETTTTEE--CEEEEEEECCSTTT---HHHHTTCEETTEEH--------------HHHHHHHHHHHHHHTTTGGGTC
T ss_pred HHHHHHHhhcC--CcEEEEEeCCCCCH---HHHHHHhccCCChH--------------HHHHHHHHHHHHHhcccccccC
Confidence 97 46554434 58999999999743 34432 22222110 0001245566663 2333 7
Q ss_pred CceEEe---Cccchh---hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHH
Q psy4093 224 IAGLVC---QAPSVL---ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRY 295 (434)
Q Consensus 224 v~GvVc---s~~e~~---~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i 295 (434)
++|||| |+.|+. ...|+|++|||||+.+ .||| ++||.+|+ +.|+|+||||||||+|+||.+++++|
T Consensus 255 ~~GvV~GATsp~e~~~iR~~~p~~~iLtPGIGAQ-----ggDq~rv~tp~~a~-~~g~~~ivVGR~I~~A~dP~~Aa~~i 328 (342)
T 3n3m_A 255 FIGFVVGANSYDEMNYIRTYFPNCYILSPGIGAQ-----NGDLHKTLTNGYHK-SYEKILINIGRAITKNPYPQKAAQMY 328 (342)
T ss_dssp CEEEEECTTCHHHHHHHHHHSTTCCEEECCSSTT-----CCCHHHHHHHHCCS-SGGGEEEEECHHHHTSSCHHHHHHHH
T ss_pred CceEEECCCCHHHHHHHHHhCCCCeEEeCCCCcC-----CCCHHHHHhhhhhh-hcCceEEEcChhhhcCCCHHHHHHHH
Confidence 999999 777774 3336899999999754 3566 67999999 89999999999999999999999999
Q ss_pred HHHHHHHHHH
Q psy4093 296 KEVMWEAYEQ 305 (434)
Q Consensus 296 ~~~~~~a~~~ 305 (434)
++ +|+++++
T Consensus 329 ~~-ei~~~l~ 337 (342)
T 3n3m_A 329 YD-QINAILK 337 (342)
T ss_dssp HH-HHHHHHH
T ss_pred HH-HHHHHHH
Confidence 98 7777654
No 12
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.95 E-value=1.9e-29 Score=241.53 Aligned_cols=181 Identities=22% Similarity=0.272 Sum_probs=130.9
Q ss_pred ccceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRI 154 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~ 154 (434)
++-.+.|.+...|-..|...+..... ..++.++ |+|++|||||+..+++.+.+ ++|++|||+.+|.+||+++++.
T Consensus 36 ~~v~~~Kvg~~lf~~~G~~~v~~l~~---~~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~ 112 (228)
T 3m47_A 36 EYIDTVKIGYPLVLSEGMDIIAEFRK---RFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNV 112 (228)
T ss_dssp TTCSEEEEEHHHHHHHCTHHHHHHHH---HHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHH
T ss_pred CcccEEEEcHHHHHhcCHHHHHHHHh---cCCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHH
Confidence 34567788888886667665543322 0223345 99999999999999997777 6999999999999999999999
Q ss_pred hhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccc-
Q psy4093 155 SDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPS- 233 (434)
Q Consensus 155 ~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e- 233 (434)
+++.+ +++++|+.||+++..+. +.. .++.++++|+++ |++|+|||+.+
T Consensus 113 ~~~~g--~~v~vLt~~s~~~~~~~--~~~-------------------------~~~~~a~~a~~~--G~~GvV~~at~~ 161 (228)
T 3m47_A 113 AEEMG--REVFLLTEMSHPGAEMF--IQG-------------------------AADEIARMGVDL--GVKNYVGPSTRP 161 (228)
T ss_dssp HHHHT--CEEEEECCCCSGGGGTT--HHH-------------------------HHHHHHHHHHHT--TCCEEECCSSCH
T ss_pred HHhcC--CCeEEEEeCCCccHHHH--HHH-------------------------HHHHHHHHHHHh--CCcEEEECCCCh
Confidence 87766 57888888888643321 111 134667777666 69999999643
Q ss_pred --hh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 234 --VL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 234 --~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
+. .++++|++||||||++ +.|| +++ ++|||++||||+|++|+||.++++++++ +|+..
T Consensus 162 ~e~~~ir~~~~~~~~iv~PGI~~~---------g~~p-~~~-~aGad~iVvGr~I~~a~dp~~a~~~~~~-~~~~~ 225 (228)
T 3m47_A 162 ERLSRLREIIGQDSFLISPGVGAQ---------GGDP-GET-LRFADAIIVGRSIYLADNPAAAAAGAIE-SIKDL 225 (228)
T ss_dssp HHHHHHHHHHCSSSEEEECC-------------------CG-GGTCSEEEECHHHHTSSCHHHHHHHHHH-HC---
T ss_pred HHHHHHHHhcCCCCEEEecCcCcC---------CCCH-hHH-HcCCCEEEECHHHhCCCCHHHHHHHHHH-HHHHH
Confidence 32 4677799999999986 3479 999 9999999999999999999999999997 66543
No 13
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.95 E-value=2.9e-28 Score=254.34 Aligned_cols=192 Identities=19% Similarity=0.155 Sum_probs=144.1
Q ss_pred ccceecccchhhhccCCCccccccch--hchhhhHHHh-hhcccCHHHHHHHHHHHhcc--ccceEEEcccCCchhHHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFV--MAQNVLWSII-ILKLADIGAAVGHQFRLIGE--WAHLVTVHSIAGPGPLQEI 151 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~--igqr~~~si~-dlKl~DI~nTv~~~~~~~~~--~~d~vTvH~~~G~~ml~~a 151 (434)
|+-...+-|...|...|...+..... -+-+.++.++ |+|+||||||+..+++.+.. ++|++|||+++|.+||+++
T Consensus 44 ~~v~~~Kvg~~lf~~~G~~~v~~L~~~~~~~~~g~~VflDlK~~DIpnT~~~~a~~~~~~lg~d~vTvh~~~G~~~l~~~ 123 (453)
T 3qw4_B 44 EYAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASPYMGSDSLQPF 123 (453)
T ss_dssp GGCSEEEEBHHHHHTTHHHHHHHHHHHHHTSCTTSCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECSTTCHHHHHHH
T ss_pred CcCcEEEEcHHHHHhcCHHHHHHHHHHHHhhcCCCeEEEEeecCChHHHHHHHHHHHHHHcCCCEEEEcccCCHHHHHHH
Confidence 44566666777777666443322211 0111234445 99999999999999987554 5999999999999999999
Q ss_pred HHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHh-hcCC-CCceEEe
Q psy4093 152 QRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQ-SFPG-LIAGLVC 229 (434)
Q Consensus 152 ~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~-~a~~-gv~GvVc 229 (434)
++.. + +++++|+.||++++- ++.++|+... ..++.|+++|+ .+.+ |++|+||
T Consensus 124 ~~~~---~--~~v~vL~~tS~~~~~---~lq~~~~~~~------------------~~~~~V~~~a~~~~~~~g~~GvV~ 177 (453)
T 3qw4_B 124 MRYP---D--KAVFVLCKTSNKGSN---DLQCLRVGDR------------------YLYEAVAERAEGPWNVNGNVGLVV 177 (453)
T ss_dssp HTCT---T--SEEEEEEECSSGGGG---GTTTSEETTE------------------EHHHHHHHHHTTTTCTTSCEEEEE
T ss_pred HHhh---C--CcEEEEEeCCCcchH---HHHhcccCCC------------------CHHHHHHHHHHHHHhhcCCeEEEE
Confidence 8754 3 578999988886432 2323232210 12579999999 8877 8999999
Q ss_pred Cc---cchh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCE------EEeCCcccCCCCHHHHHHHHH
Q psy4093 230 QA---PSVL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADL------GVVGRGITQAPDPVEAARRYK 296 (434)
Q Consensus 230 s~---~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~------IVVGR~It~A~DP~~aa~~i~ 296 (434)
|+ +|+. .+++.| ++|||||++ +.||++|+ ++|+|+ ||||||||+|+||.+++++|+
T Consensus 178 gat~~~e~~~ir~~~~~~~-~l~PGig~q---------g~tp~~a~-~~g~d~~~~~~livvgR~I~~A~dp~~aa~~i~ 246 (453)
T 3qw4_B 178 GATDPVALARVRARAPTLW-FLVPGIGAQ---------GGSLKASL-DAGLRADGSGMLINVSRGLARAADPRAAAKELC 246 (453)
T ss_dssp CTTCHHHHHHHHHHCSSCC-EEECCSSTT---------CCCHHHHH-HHHCCTTSCCEEEEESHHHHSCSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCCCCe-EEECCcCCC---------CCCHHHHH-HhcCCcccCCceEecChhhccCCCHHHHHHHHH
Confidence 84 6664 566676 689999986 45999999 999998 999999999999999999999
Q ss_pred HHHHHHHHHH
Q psy4093 297 EVMWEAYEQR 306 (434)
Q Consensus 297 ~~~~~a~~~~ 306 (434)
+ +|++.+++
T Consensus 247 ~-~i~~~r~~ 255 (453)
T 3qw4_B 247 E-EINAIRFA 255 (453)
T ss_dssp H-HHHHHHSC
T ss_pred H-HHHHHHhc
Confidence 8 88888766
No 14
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=99.95 E-value=1.4e-28 Score=240.61 Aligned_cols=106 Identities=36% Similarity=0.580 Sum_probs=101.0
Q ss_pred cccChhhhhhhccchhhHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHH-HHHHHHHHH
Q psy4093 314 IVTPFETRKADVKCRISSTLLDIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEE-VQKELTALA 392 (434)
Q Consensus 314 ~~~~~~~r~~~~~~~~~~~l~~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~-~v~~L~~la 392 (434)
++++|++|+++++||+++||+++|++|+++||||||+++.+++++|+++++|++|++|+|++||.++|++ +++.|++++
T Consensus 2 ~~~~~~~r~~~~~~~~~~~l~~~m~~k~~~LiVALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~~v~~L~~l~ 81 (267)
T 3gdm_A 2 SKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALS 81 (267)
T ss_dssp -CCCHHHHHHHCSCHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCSSCCTTTTHHHHHHHH
T ss_pred CcCCHHHHHhccCChHHHHHHHHHHhhCCCEEEEeCcCCHHHHHHHHHHhCCcCcEEEECHHHHHhcCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999 999999998
Q ss_pred hcCCCeeeecCCCCcchhHHHHHhhcC
Q psy4093 393 KQHEFLRSRNGWFSPILSSFSLRFRDD 419 (434)
Q Consensus 393 ~k~gf~iFlDlKf~DIpnTV~~a~~~~ 419 (434)
+++||+||+|+|||||||||+++|+.+
T Consensus 82 ~~~g~~IflDlK~~DIpnTv~~~y~~a 108 (267)
T 3gdm_A 82 AKYNFLLFEDRRFADIGNTVKLQYSAG 108 (267)
T ss_dssp HHHTCEEEEEEEECCCHHHHHHHHHST
T ss_pred hhcCCeEEEEeccccchHHHHHHHHHH
Confidence 889999999999999999999987544
No 15
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=99.95 E-value=4.3e-28 Score=236.28 Aligned_cols=104 Identities=40% Similarity=0.613 Sum_probs=100.7
Q ss_pred cccChhhhhhhcc-chhhHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHH
Q psy4093 314 IVTPFETRKADVK-CRISSTLLDIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALA 392 (434)
Q Consensus 314 ~~~~~~~r~~~~~-~~~~~~l~~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la 392 (434)
.+++|++|++++. ||+++||+++|++|+++||||||+++.+++++|+++++|++|++|+|++||.++|++++++|++++
T Consensus 3 ~~~~~~~r~~~~~~~~~~~~l~~~~~~k~~~LiVALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a 82 (260)
T 3eww_A 3 MELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLA 82 (260)
T ss_dssp CCCCHHHHTTCTTCCHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHH
T ss_pred cccCHHHHHhcCCCCcHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHH
Confidence 3689999999999 999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 393 KQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 393 ~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
+++||+||+|+|||||||||+++++
T Consensus 83 ~~~g~~VflDlK~~DIpnTv~~a~~ 107 (260)
T 3eww_A 83 KCHEFLIFENRKFADIGNTVKKQYE 107 (260)
T ss_dssp HHHTCEEEEEEEECSCHHHHHHHHH
T ss_pred hhcCCeEEEEeeccccHHHHHHHHH
Confidence 8899999999999999999999886
No 16
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=99.94 E-value=5.8e-28 Score=240.28 Aligned_cols=105 Identities=39% Similarity=0.585 Sum_probs=100.7
Q ss_pred ccccChhhhhhhcc-chhhHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHH
Q psy4093 313 RIVTPFETRKADVK-CRISSTLLDIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTAL 391 (434)
Q Consensus 313 ~~~~~~~~r~~~~~-~~~~~~l~~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~l 391 (434)
+.+++|++|++++. ||+++||+++|++|+++||||||+++.+++++|+++++|++|++|+|++||.++|++++++|+++
T Consensus 54 ~~~~~~~~r~~~~~~~p~~~~L~~~m~~k~~~LiVALD~~~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~ 133 (312)
T 3g3d_A 54 PKELSFGARAELPRIHPVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITL 133 (312)
T ss_dssp --CCCHHHHTTCTTCCHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHH
Confidence 56799999999999 99999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 392 AKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 392 a~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
++++||+||+|+|||||||||+++++
T Consensus 134 a~~~g~~IflDlK~~DIpnTv~~a~~ 159 (312)
T 3g3d_A 134 AKCHEFLIFEDRKFADIGNTVKKQYE 159 (312)
T ss_dssp HHHHTCEEEEEEEECSCHHHHHHHHH
T ss_pred HhhCCCEEEEECcccccHHHHHHHHH
Confidence 88899999999999999999999886
No 17
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=99.94 E-value=2e-28 Score=247.37 Aligned_cols=206 Identities=17% Similarity=0.174 Sum_probs=140.0
Q ss_pred ccceecccchhhhccCCCccccccch---hchhhhHHHh-hhcccCHHHHHHHHHHHhcc-c-cceEEEcccCCchhHHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHFV---MAQNVLWSII-ILKLADIGAAVGHQFRLIGE-W-AHLVTVHSIAGPGPLQE 150 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~~---igqr~~~si~-dlKl~DI~nTv~~~~~~~~~-~-~d~vTvH~~~G~~ml~~ 150 (434)
||-.+.+-+...|...|...+..... .-+..++.++ |+|++|||||+..+++.+.+ + +|++|||+++|.+||++
T Consensus 117 ~~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~g~~VflDlK~~DIgnTv~~ya~a~~~~lgaD~vTVh~~~G~~sl~~ 196 (352)
T 2fds_A 117 EYALIYKMNFAFYIPYGSVGINALKNVFDYLNSMNIPTMLDMKINDIGNTVKNYRKFIFEYLKSDSCTINVYMGTSMLKD 196 (352)
T ss_dssp GGCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTCSTTHHH
T ss_pred cccCEEEecHHHHHhCCHHHHHHHHHHHHHHHHCCCeEEEEeecCchHHHHHHHHHHHHhhcCCCEEEEeCCCCHHHHHH
Confidence 44455566666666666444321110 0112244455 99999999999999887766 5 99999999999999999
Q ss_pred HHH-HhhhhCCCCceEEEEEeCCCCCCChHHHHh-hcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcC----CCC
Q psy4093 151 IQR-ISDELGEDRGVFLIAQLSCQGNLIDEKYTQ-VGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFP----GLI 224 (434)
Q Consensus 151 a~~-~~~~~~~~~~v~~v~~lss~~sl~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~----~gv 224 (434)
+++ ...+.+ +++++|++|||+++ .++.+ .+....+ +.+ ...+.+.++|+.+. .+.
T Consensus 197 a~~~~a~~~g--kgv~lLa~TSn~~~---~dlq~~~~~~g~~--l~~------------~v~~~v~~la~~~G~d~~~~~ 257 (352)
T 2fds_A 197 ICFDYEKNKY--YSAYVLIKTTNKDS---FIFQNELSINDKQ--AYI------------VMAEETQKMATDLKIDQNNEF 257 (352)
T ss_dssp HSEETTTTEE--CEEEEEEECSSGGG---HHHHTTCEETTEE--HHH------------HHHHHHHHHHHHHTTGGGTCC
T ss_pred HHHHHhhccC--CceEEEEEeCCcCH---HHHHHhhccCCCc--HHH------------HHHHHHHHHHHHhCCCccCCc
Confidence 975 433334 57999999988643 33432 0111110 000 01234556666541 123
Q ss_pred ceEEe---Cccchh---hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHH
Q psy4093 225 AGLVC---QAPSVL---ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYK 296 (434)
Q Consensus 225 ~GvVc---s~~e~~---~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~ 296 (434)
.|+|| ++.|+. ...++|++|||||+.+ .||| ++||.+|+ +.|+|+||||||||+|+||++++++|+
T Consensus 258 ~GvVvGaTs~~e~~~iR~~~~~~~iLtPGIGaq-----gGdq~rv~tp~~a~-~~gadiIvVGR~I~~A~dp~~Aa~~i~ 331 (352)
T 2fds_A 258 IGFVVGSNAFEEMKIIRNKFPDSYILSPGIGAQ-----NGDLYKTLKNGYNK-DYEKLLINVGRAITKSPNPKKSSESYY 331 (352)
T ss_dssp EEEEECTTCHHHHHHHHHHSTTCCEEECCC----------CHHHHHHHHCCS-SGGGEEEEECHHHHTSSCHHHHHHHHH
T ss_pred ceEEEcCCCHHHHHHHHHhCCCCEEEcCccccc-----cCcHHHhhCHHhHh-hcCceEEEECHHHccCCCHHHHHHHHH
Confidence 59999 666653 3348999999999654 4566 57999999 899999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy4093 297 EVMWEAYEQRLK 308 (434)
Q Consensus 297 ~~~~~a~~~~~~ 308 (434)
+ +|+++++++.
T Consensus 332 ~-ei~~~l~~~~ 342 (352)
T 2fds_A 332 N-QIIQIFKDIE 342 (352)
T ss_dssp H-HHHHHHHHHC
T ss_pred H-HHHHHHHHHh
Confidence 8 5789999976
No 18
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=99.94 E-value=3.2e-27 Score=223.91 Aligned_cols=167 Identities=22% Similarity=0.225 Sum_probs=121.5
Q ss_pred eecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhccc-cceEEEcccCCchhHHHHHHHhhh
Q psy4093 80 SVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGEW-AHLVTVHSIAGPGPLQEIQRISDE 157 (434)
Q Consensus 80 SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~~-~d~vTvH~~~G~~ml~~a~~~~~~ 157 (434)
.+.+-|...|. .|...+..... .++.++ |+|++|||||+..+++.+.++ +|++|||+++|.+||+++.+.+.
T Consensus 35 ~~~Kvg~~l~~-~G~~~v~~l~~----~~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~~G~~~l~~~~~~~~- 108 (213)
T 1vqt_A 35 EVVKVGHNLAI-HGKKIFDELAK----RNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCAGYESVERALSATD- 108 (213)
T ss_dssp SEEEECHHHHT-TCTHHHHHHHT----TTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGGCHHHHHHHHHHCS-
T ss_pred CEEEECHHHHh-hCHHHHHHHHH----CCCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEeccCCHHHHHHHHHhcC-
Confidence 34666677777 77655544322 234455 999999999999999988885 99999999999999999988763
Q ss_pred hCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccchh-
Q psy4093 158 LGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSVL- 235 (434)
Q Consensus 158 ~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~~- 235 (434)
...+.|++|||. ... +.+ .+.++|+. .+ |++ +||++.++.
T Consensus 109 ----~~~~~V~~lts~---~~~-l~~----------------------------~v~~~a~~-~e~G~d-vV~~~~~~~~ 150 (213)
T 1vqt_A 109 ----KHVFVVVKLTSM---EGS-LED----------------------------YMDRIEKL-NKLGCD-FVLPGPWAKA 150 (213)
T ss_dssp ----SEEEEECCCTTS---CCC-HHH----------------------------HHHHHHHH-HHHTCE-EECCHHHHHH
T ss_pred ----CCeEEEEEeCCC---CHH-HHH----------------------------HHHHHHHH-hcCCCE-EEEcHHHHHH
Confidence 235667777662 222 211 34444555 44 788 999997764
Q ss_pred ---hcCCCceEecCcccccCCCCCCCCc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 236 ---ASNPGLLQLTPGIHLNQTGDNKGQQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 236 ---~~~~~~l~vtPGIr~~~~~~~~~dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.++++ +||||||++ +.+ +|| ++||++ + ++|||+|||||+||+|+||.+++++|++
T Consensus 151 ir~~~~~~--~v~pGI~~~--~~~-~dq~rv~t~~~-i-~aGad~iVvGR~I~~a~dP~~aa~~i~~ 210 (213)
T 1vqt_A 151 LREKIKGK--ILVPGIRME--VKA-DDQKDVVTLEE-M-KGIANFAVLGREIYLSENPREKIKRIKE 210 (213)
T ss_dssp HTTTCCSC--EEECCBC------------CCBCHHH-H-TTTCSEEEESHHHHTSSCHHHHHHHHTC
T ss_pred HHHHCCCC--EEECCCCCC--CCc-cchhhcCCHHH-H-HCCCCEEEEChhhcCCCCHHHHHHHHHH
Confidence 34443 999999998 554 677 689999 9 9999999999999999999999999987
No 19
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.93 E-value=3.4e-26 Score=219.78 Aligned_cols=162 Identities=27% Similarity=0.414 Sum_probs=129.3
Q ss_pred hhhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhhhh---CCCCc---eEEEEEeCCCCCCChHHH-Hh
Q psy4093 112 IILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISDEL---GEDRG---VFLIAQLSCQGNLIDEKY-TQ 183 (434)
Q Consensus 112 ~dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~~~---~~~~~---v~~v~~lss~~sl~~~~~-~~ 183 (434)
+|+|++|||+|+..+++.+.+ ++|++|||+.+|.+|++++++..++. | .+ ++.|+.+|| ...+.+ .+
T Consensus 59 lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g--~~~~~~~~V~~~ts---~~~~~l~~~ 133 (239)
T 1dbt_A 59 LDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAG--KKRPSLIAVTQLTS---TSEQIMKDE 133 (239)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTT--SCCCEEEEECSCTT---CCHHHHHHT
T ss_pred EEeccccchHHHHHHHHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhhhccC--CCCccEEEEEEcCC---CCHHHHHHH
Confidence 499999999999999887777 59999999999999999998888766 5 33 466667766 233444 33
Q ss_pred hcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccchh----hcCCCceEecCcccccCCCCCCC
Q psy4093 184 VGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSVL----ASNPGLLQLTPGIHLNQTGDNKG 258 (434)
Q Consensus 184 ~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~~----~~~~~~l~vtPGIr~~~~~~~~~ 258 (434)
+|+.. ...+.|+.+|..+.+ |.+||||++.++. .+++.++.|+|||+++ +.+.|
T Consensus 134 ~~~~~-------------------~~~d~Vl~ma~~~~~~G~~g~v~~~~~i~~lr~~~~~~~i~v~gGI~~~--~~~~~ 192 (239)
T 1dbt_A 134 LLIEK-------------------SLIDTVVHYSKQAEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMS--EDAAN 192 (239)
T ss_dssp SCBCS-------------------CHHHHHHHHHHHHHHTTCSEEECCGGGHHHHTTTSCTTCEEEECCBCCT--TSCCT
T ss_pred hccCC-------------------CHHHHHHHHHHHHHHhCCCEEEECHHHHHHHHHhcCCCcEEEeCCcCCC--CCCcc
Confidence 22110 124678889887665 7999999997664 4556788999999998 77777
Q ss_pred Cc--cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 259 QQ--YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 259 dQ--~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
|| ++||.+|+ ++|||++||||+|++|+||.+++++|++ .|+
T Consensus 193 dq~rv~tp~~a~-~aGad~iVvGr~I~~a~dp~~a~~~l~~-~i~ 235 (239)
T 1dbt_A 193 DQVRVATPAIAR-EKGSSAIVVGRSITKAEDPVKAYKAVRL-EWE 235 (239)
T ss_dssp TCSSCBCHHHHH-HTTCSEEEECHHHHTSSCHHHHHHHHHH-HHH
T ss_pred ceeccCCHHHHH-HcCCCEEEEChhhcCCCCHHHHHHHHHH-HHH
Confidence 88 68999999 9999999999999999999999999987 554
No 20
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.93 E-value=6.7e-26 Score=218.67 Aligned_cols=161 Identities=22% Similarity=0.351 Sum_probs=129.1
Q ss_pred hhhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhhhhCC-CCceEEEEEeCCCCCCChHHHHhhcchhh
Q psy4093 112 IILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISDELGE-DRGVFLIAQLSCQGNLIDEKYTQVGFKAI 189 (434)
Q Consensus 112 ~dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~~~~~-~~~v~~v~~lss~~sl~~~~~~~~g~~~~ 189 (434)
+|+|++|||+|+..+++.+.+ ++|++|||+.+|.+|++++++..++.|. ..++++|+.+|+ ...+++.++|+..
T Consensus 70 lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts---~~~~~l~~~~~~~- 145 (245)
T 1eix_A 70 LDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTS---MEASDLVDLGMTL- 145 (245)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTT---CCHHHHHTTTCCS-
T ss_pred EEeeccccHHHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCC---CCHHHHHHhccCC-
Confidence 499999999999998887777 5999999999999999999998876652 113556666676 2344554422211
Q ss_pred HHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccchh----hcCCCceEecCcccccCCCCCCCCcc--C
Q psy4093 190 TLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSVL----ASNPGLLQLTPGIHLNQTGDNKGQQY--N 262 (434)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~--~ 262 (434)
...+.|+.++..+.+ |.+||||++.|+. .+++.++.|+|||+++ |++.+||. .
T Consensus 146 ------------------~~~d~Vl~ma~~~~~~G~~g~V~~~~ei~~lr~~~~~~~i~v~gGI~~~--g~~~~dq~rv~ 205 (245)
T 1eix_A 146 ------------------SPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQ--GSEAGDQRRIM 205 (245)
T ss_dssp ------------------CHHHHHHHHHHHHHHTTCSEEECCGGGHHHHHHHHCSSSEEEECCBCCT--TCCCTTCCSCB
T ss_pred ------------------CHHHHHHHHHHHHHHcCCCeEEeCHHHHHHHHHhcCCCCEEEECCcCCC--CCCccchhccC
Confidence 123678888876655 7999999998864 4566789999999998 88888995 5
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
||++|+ ++|||++||||+|++++||.+++++|++
T Consensus 206 t~~~a~-~aGad~iVvGr~I~~a~dp~~a~~~l~~ 239 (245)
T 1eix_A 206 TPEQAL-SAGVDYMVIGRPVTQSVDPAQTLKAINA 239 (245)
T ss_dssp CHHHHH-HTTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred CHHHHH-HcCCCEEEECHHHcCCCCHHHHHHHHHH
Confidence 999999 9999999999999999999999999986
No 21
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.93 E-value=4.9e-26 Score=219.64 Aligned_cols=165 Identities=25% Similarity=0.362 Sum_probs=124.4
Q ss_pred hhhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhhh---hCCCC-ceEEEEEeCCCCCCChHHH-Hhhc
Q psy4093 112 IILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISDE---LGEDR-GVFLIAQLSCQGNLIDEKY-TQVG 185 (434)
Q Consensus 112 ~dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~~---~~~~~-~v~~v~~lss~~sl~~~~~-~~~g 185 (434)
+|+|++|||+|+..+++.+.+ ++|++|||+.+|.+|++++++..++ .|... .+++|+.+|| ...+++ .++|
T Consensus 60 lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts---~~~~~l~~~~~ 136 (246)
T 2yyu_A 60 LDLKLHDIPNTVKQAMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTS---TDERMLHEELW 136 (246)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTT---CCHHHHHHTSC
T ss_pred EEeecccchHHHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCC---CCHHHHHHHhc
Confidence 499999999999998887777 5999999999999999999888766 34111 2455666665 334555 4433
Q ss_pred chhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccchh----hcCCCceEecCcccccCCCCCCCCc
Q psy4093 186 FKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPSVL----ASNPGLLQLTPGIHLNQTGDNKGQQ 260 (434)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ 260 (434)
+.. ...+.|+.++..+.+ |.+||||++.|+. .+++.|+.|+|||+++ +++.+||
T Consensus 137 ~~~-------------------~~~d~Vl~ma~~~~~~G~~g~V~~~~ei~~lr~~~~~~~i~V~gGI~~~--g~~~~dq 195 (246)
T 2yyu_A 137 ISR-------------------PLVETVAHYAALAKESGLDGVVCSANEAAFIKERCGASFLAVTPGIRFA--DDAAHDQ 195 (246)
T ss_dssp CCS-------------------CHHHHHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCTTSEEEECCCCCC--C------
T ss_pred CCC-------------------CHHHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHhcCCCCEEEeCCcCCC--CCCcccc
Confidence 211 123678888887666 7999999998764 4567889999999998 8888899
Q ss_pred c--CCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHH
Q psy4093 261 Y--NGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEA 302 (434)
Q Consensus 261 ~--~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a 302 (434)
. .||.+|+ ++|||++||||+|++++||.+++++|++ .|++
T Consensus 196 ~rv~t~~~a~-~aGad~iVvGr~I~~a~dp~~a~~~l~~-~i~~ 237 (246)
T 2yyu_A 196 VRVVTPRKAR-ALGSDYIVIGRSLTRAADPLRTYARLQH-EWNG 237 (246)
T ss_dssp -CCCCHHHHH-HHTCSEEEECHHHHTSSSHHHHHHHHHH-HCC-
T ss_pred cccCCHHHHH-HcCCCEEEECHhhcCCCCHHHHHHHHHH-HHHH
Confidence 4 5999999 9999999999999999999999999987 4443
No 22
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=99.93 E-value=5.1e-26 Score=229.87 Aligned_cols=164 Identities=20% Similarity=0.230 Sum_probs=124.5
Q ss_pred hHHHh-hhcccCHHHHHHHHHHHhc-c-ccceEEEcccCCchhHHHHHHHhhhhCCCC---ceEEEEEeCCCCCCChHHH
Q psy4093 108 LWSII-ILKLADIGAAVGHQFRLIG-E-WAHLVTVHSIAGPGPLQEIQRISDELGEDR---GVFLIAQLSCQGNLIDEKY 181 (434)
Q Consensus 108 ~~si~-dlKl~DI~nTv~~~~~~~~-~-~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~---~v~~v~~lss~~sl~~~~~ 181 (434)
++.++ |+|++|||||+..+++.+. . ++|++|||+++|.+||+++++... + + ++++|+.||+++ ..++
T Consensus 161 g~~VflDlK~~DIgnTva~ya~a~~~~lgaD~vTVhp~~G~dsl~~a~~~~~--~--k~~~gV~VL~lTSN~~---~~dl 233 (353)
T 2ffc_A 161 NVPTILDIKMNDIGNTVKHYRKFIFDYLRSDSCTANIYMGTQMLRDICLDEE--C--KRYYSTFVLVKTTNAD---SHIF 233 (353)
T ss_dssp TCCEEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTTCSTTHHHHHBCTT--S--CCBCEEEEEEECSSTT---THHH
T ss_pred CCcEEEEEecCchHHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHhc--C--CCcceEEEehhcCCCC---HHHH
Confidence 34455 9999999999999998775 3 699999999999999999984432 3 4 677777777653 3445
Q ss_pred Hhhc-chhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcC--------CC-CceEE--eCccchh---hcCCCceEecC
Q psy4093 182 TQVG-FKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFP--------GL-IAGLV--CQAPSVL---ASNPGLLQLTP 246 (434)
Q Consensus 182 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~--------~g-v~GvV--cs~~e~~---~~~~~~l~vtP 246 (434)
++.+ .... ..++.|+++|+.+. .| +++|| |++.|+. ...+++++|||
T Consensus 234 q~~~~~~g~------------------~v~e~V~~~A~~~g~~~~~~~~~G~~g~VVGats~~el~~IR~~~~~~~iLtP 295 (353)
T 2ffc_A 234 QNRLSLDGK------------------EAYVVIAEEVQKMAKQLHLEENGEFVGFVVGANCYDEIKKIRELFPDCYILAP 295 (353)
T ss_dssp HTTCEETTE------------------EHHHHHHHHHHHHHHHTTTGGGTCCEEEEECTTCHHHHHHHHHHCTTCCEEEC
T ss_pred HHhhccCCC------------------CHHHHHHHHHHHhCccccccCCCCCCCEEEeCCCHHHHHHHHHhCCCCeEEeC
Confidence 4422 1110 12467777776653 23 77889 9998875 33458999999
Q ss_pred cccccCCCCCCCCccCCHHHHHHHcCCC------EEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Q psy4093 247 GIHLNQTGDNKGQQYNGPTDVITLRGAD------LGVVGRGITQAPDPVEAARRYKEVMWEAYEQRL 307 (434)
Q Consensus 247 GIr~~~~~~~~~dQ~~TP~~Ai~~~GAD------~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~ 307 (434)
|||++ + .+|++|+ ++|+| +||||||||+|.||+++|++|+++.| ++++++
T Consensus 296 GIgaq--G-------GD~~~a~-~~Gad~~~~~~iIvVGR~I~~A~dp~~AA~~i~~ei~-~a~~~~ 351 (353)
T 2ffc_A 296 GVGAQ--K-------GDLRKML-CNGYSKNYEKVLINVGRAITKSGSPQQAAREYHQQIK-EVLAEL 351 (353)
T ss_dssp CBSTT--C-------BCHHHHH-HHHCCSSGGGEEEEECHHHHTSSCHHHHHHHHHHHHH-HHHHHC
T ss_pred cccCC--C-------CCHHHHH-HcCCCcccCcEEEEECHHHcCCCCHHHHHHHHHHHHH-HHHHHh
Confidence 99986 3 3699999 99998 99999999999999999999999665 455554
No 23
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.89 E-value=6.1e-25 Score=209.19 Aligned_cols=184 Identities=17% Similarity=0.129 Sum_probs=128.0
Q ss_pred cceecccchhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhccccceEEEcccCCchhHHHHHHHhh
Q psy4093 78 FDSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISD 156 (434)
Q Consensus 78 y~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~ 156 (434)
+-.+.|.|...|...|.+.+....... .++.++ |+||+|||||+..++ ...|+|++|||+.+|.+||+++++..+
T Consensus 30 ~~~~ikvg~~lf~~~G~~~v~~l~~~~--p~~~iflDlKl~Dip~t~~~~~--~~~Gad~vtVH~~~g~~~l~~a~~~~~ 105 (221)
T 3exr_A 30 EVDVIEAGTVCLLQVGSELVEVLRSLF--PDKIIVADTKCADAGGTVAKNN--AVRGADWMTCICSATIPTMKAARKAIE 105 (221)
T ss_dssp GCSEEEECHHHHHHHCTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHHH--HTTTCSEEEEETTSCHHHHHHHHHHHH
T ss_pred CceEEEECHHHHHhcCHHHHHHHHHhC--CCCcEEEEEEeeccHHHHHHHH--HHcCCCEEEEeccCCHHHHHHHHHHHH
Confidence 345677788888666766554432210 023445 999999999999873 344899999999999999999999887
Q ss_pred hhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccchh-
Q psy4093 157 ELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPSVL- 235 (434)
Q Consensus 157 ~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e~~- 235 (434)
+.|....+++|++++|. +.+...++ . +.++. +.++++|..++ .+|+|||++|+.
T Consensus 106 ~~g~~~~~~~Vt~lts~---~~~~~~~~-~--------~~~~~-----------~~v~~~a~~~~--~~Gvv~s~~e~~~ 160 (221)
T 3exr_A 106 DINPDKGEIQVELYGDW---TYDQAQQW-L--------DAGIS-----------QAIYHQSRDAL--LAGETWGEKDLNK 160 (221)
T ss_dssp HHCTTTCEEEEECCSSC---CHHHHHHH-H--------HTTCC-----------EEEEECCHHHH--HHTCCCCHHHHHH
T ss_pred hcCCCcceEEEEEcCCC---CHHHHHHH-H--------cCCHH-----------HHHHHHHHhcC--CCccccCHHHHHH
Confidence 66522357888888872 22232220 0 00111 11223333332 468999998775
Q ss_pred ---hcCCCc-eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 236 ---ASNPGL-LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 236 ---~~~~~~-l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
.++.+| +.|+||||++ +-.+++ ++|||++||||+|++|+||.+++++|++ .|+.|
T Consensus 161 ir~~~~~~~~i~v~gGI~~~-----------~~~~~~-~aGad~~VvG~~I~~a~dp~~a~~~~~~-~~~~~ 219 (221)
T 3exr_A 161 VKKLIEMGFRVSVTGGLSVD-----------TLKLFE-GVDVFTFIAGRGITEAKNPAGAARAFKD-EIKRI 219 (221)
T ss_dssp HHHHHHHTCEEEEESSCCGG-----------GGGGGT-TCCCSEEEECHHHHTSSSHHHHHHHHHH-HHHHH
T ss_pred HHHhhcCCceEEEECCCCHH-----------HHHHHH-HCCCCEEEECchhhCCCCHHHHHHHHHH-HHHHH
Confidence 456678 5899999986 224778 8999999999999999999999999997 56544
No 24
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=99.88 E-value=5.5e-23 Score=202.35 Aligned_cols=198 Identities=19% Similarity=0.117 Sum_probs=133.4
Q ss_pred ccceecccchhhhccCCCccccccc---hhchhhhHHHh-hhcccCHHHHHHHHHHHhc----cc-cceEEEcccCCchh
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHF---VMAQNVLWSII-ILKLADIGAAVGHQFRLIG----EW-AHLVTVHSIAGPGP 147 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~---~igqr~~~si~-dlKl~DI~nTv~~~~~~~~----~~-~d~vTvH~~~G~~m 147 (434)
||-...+-+...|...|...+.... ..-++.++.+| |+|++|||||+..+++.+. .+ +|++|||+++|.+|
T Consensus 61 ~~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~g~~VflDlK~~DIpnTv~~ya~~~~~~~~~lg~D~vTvh~~~G~~~ 140 (284)
T 3l52_A 61 EHVAVFKPQSAFFERFGSRGVAVLEKTVAEARAAGALVVMDAKRGDIGSTMAAYAEAFLRKDSPLFSDALTVSPYLGYGS 140 (284)
T ss_dssp TTCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHHHHHSSTTSTTCCSEEEECCTTCGGG
T ss_pred CcceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHCCCcEEEEecccCcHHHHHHHHHHHhccccccCCcEEEEeccCCHHH
Confidence 4455566666667665544111111 11122344455 9999999999999888764 35 99999999999999
Q ss_pred HHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcC----C-
Q psy4093 148 LQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFP----G- 222 (434)
Q Consensus 148 l~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~----~- 222 (434)
|+++++.+.+.+ +++++|+.||++++-+.++.. .. .-..+++.|+++++.+. +
T Consensus 141 l~~~~~~a~~~~--kgvfvL~~tSnpg~~~~q~~~---~~-----------------~g~~l~e~V~~~a~~~~~~~~~~ 198 (284)
T 3l52_A 141 LRPAVELARESG--AGLFVLALTSNPEGGEVQHAV---RT-----------------DGRDVAATMLAHLAAENAGEEPL 198 (284)
T ss_dssp GHHHHHHHHHHT--CEEEEEEECCSTTTHHHHTCB---CT-----------------TSCBHHHHHHHHHHHHTTTCSSC
T ss_pred HHHHHHHHHhcC--CeEEEEEeCCCCChHHHHhcc---cc-----------------CCCcHHHHHHHHHHHhccccCcC
Confidence 999999987666 799999999998765333221 00 00123578888887633 3
Q ss_pred CCceEEeCccch----hhcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCC-CEEEeCCcccCCC----CHHHHHH
Q psy4093 223 LIAGLVCQAPSV----LASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGA-DLGVVGRGITQAP----DPVEAAR 293 (434)
Q Consensus 223 gv~GvVcs~~e~----~~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GA-D~IVVGR~It~A~----DP~~aa~ 293 (434)
+..|+||++.+. ....++..+++|||++| |.+.+|+. .+....|. -+|+++|+|+.|. ||++|++
T Consensus 199 g~~G~VvgAT~pe~~~~~lr~~~~iL~PGiGAQ--Gg~~~d~~----~~~~~~~~g~lvn~sR~Il~a~~~~~~~~~aa~ 272 (284)
T 3l52_A 199 GSFGAVVGATLGDLSSYDLDINGPLLAPGIGAQ--GAAPADLP----GVFGAAVRNVVPNVSRGVLRHGPDVRALRTAAD 272 (284)
T ss_dssp CSEEEEECTTCSCGGGSCCCSSSCEEECCTTST--TCSGGGHH----HHHGGGGGGEEEEESHHHHTTTTCHHHHHHHHH
T ss_pred CCeeEEECCCchhhhhhhhccCCcEEeCccCCC--CCCHHHHH----HHhccCCCcEEEECCHHHHcCCCCcHHHHHHHH
Confidence 689999999652 22225666999999987 44443331 11212232 3899999999986 6899999
Q ss_pred HHHHHHHHHH
Q psy4093 294 RYKEVMWEAY 303 (434)
Q Consensus 294 ~i~~~~~~a~ 303 (434)
++.+ +|+..
T Consensus 273 ~~~~-~~~~~ 281 (284)
T 3l52_A 273 RFAE-EIRAA 281 (284)
T ss_dssp HHHH-HHHHH
T ss_pred HHHH-HHHhh
Confidence 9997 66544
No 25
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=99.84 E-value=4.5e-22 Score=191.34 Aligned_cols=99 Identities=26% Similarity=0.374 Sum_probs=85.6
Q ss_pred cccCCCCCccccCC-----CCCcccccccccCCCCeecEEEcCCc-----------------------------------
Q psy4093 15 EESGQFEGDIMLEG-----PERTGVISSIDRWPGGLIPYYIDDDH----------------------------------- 54 (434)
Q Consensus 15 e~~g~~EGDi~l~~-----~~rng~~~~~~rWPn~~VpY~I~~~~----------------------------------- 54 (434)
+.+|+|||||+++. ..|||+..+..|||+++|||.|++ +
T Consensus 13 ~~~~~~eGDi~~~~~~~~~~~Rna~~~~~~~Wp~~~VpY~I~~-~t~~~~~~I~~Am~~w~~~TCIrFvprt~e~dyI~f 91 (235)
T 3lq0_A 13 YNDGMFEGDIKLRAGRQPARVGAAILGDEYLWSGGVIPYTFAG-VSGADQSAILSGMQELEEKTCIRFVPRTTESDYVEI 91 (235)
T ss_dssp CCTTCBTTTEECCSSCCCEEETTEEECGGGSCGGGEEEEEEES-CCHHHHHHHHHHHHHHHHHSSCEEEECSSCSSEEEE
T ss_pred cCCCccccceeecccCCCccCcceeeCCCCcCCCCEEEEEEcC-CCHHHHHHHHHHHHHHHhcccceEEEcCCCCceEEE
Confidence 46799999999932 469999999999999999999987 3
Q ss_pred -----cc-----------------------------------------------------------ccccccccCCCCcc
Q psy4093 55 -----FC-----------------------------------------------------------TERNFKKYPPSEIT 70 (434)
Q Consensus 55 -----~c-----------------------------------------------------------~~~NF~k~~~~~~~ 70 (434)
|| +++||+|++.. +
T Consensus 92 ~~~~~GC~S~vG~~gg~Q~lsL~~~gC~~~g~i~HEl~HaLGf~HEhsR~DRD~yV~I~~~nI~~~~~~nF~k~~~~--~ 169 (235)
T 3lq0_A 92 FTSGSGCWSYVGRISGAQQVSLQANGCVYHGTILHALMHAIGFYHEHTRMDRDNYVTINYQNVDPSMTSNFDIDTYS--R 169 (235)
T ss_dssp ESSSSSEEEESSCCSSEEEEEECTTTTCSHHHHHHHHHHHHHBCCGGGSTTGGGTEEECGGGBCTTSGGGGCCCTTS--C
T ss_pred EeCCCCCccccCCcCCcceEecCCCCCCccchHHHHHHHHhccceeeecccccceeEeehhccCcchHHHhccCCcc--c
Confidence 12 56899999876 7
Q ss_pred cCccccccceecccchhhhccC-CCcccccc-c------hhchhhhHHHhhhcc
Q psy4093 71 DFGVGYDFDSVMHYSRKAFSKN-GDDTIVPH-F------VMAQNVLWSIIILKL 116 (434)
Q Consensus 71 ~~g~pYDy~SVMhYg~~aFs~~-g~~Ti~~~-~------~igqr~~~si~dlKl 116 (434)
++|+||||+|||||++++||+| |++||+|+ + .+|||.++|..|++.
T Consensus 170 ~~g~pYDy~SvMHY~~~aFs~n~g~~Ti~~~~~~~~~~~~iGqr~~lS~~Di~~ 223 (235)
T 3lq0_A 170 YVGEDYQYYSIMHYGKYSFSIQWGVLETIVPLQNGIDLTDPYDKAHMLQTDANQ 223 (235)
T ss_dssp CCCSCCCTTCTTCCCTTTTBTTTTTSCSEEESSTTCCCCCGGGCSSCCHHHHHH
T ss_pred cCCCcCCCCcccCCCCcccccCCCCCcEEECCCCCcccccccccCCCCHHHHHH
Confidence 8999999999999999999999 99999986 2 699999999887543
No 26
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=99.83 E-value=1e-21 Score=193.76 Aligned_cols=176 Identities=15% Similarity=0.115 Sum_probs=118.5
Q ss_pred ccceecccchhhhccCCCccccccc---hhchhhhHHHh-hhcccCHHHHHHHHHHHhcc--c-cceEEEcccCCchhHH
Q psy4093 77 DFDSVMHYSRKAFSKNGDDTIVPHF---VMAQNVLWSII-ILKLADIGAAVGHQFRLIGE--W-AHLVTVHSIAGPGPLQ 149 (434)
Q Consensus 77 Dy~SVMhYg~~aFs~~g~~Ti~~~~---~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~--~-~d~vTvH~~~G~~ml~ 149 (434)
||-...+-+...|...|...+.... ..-++.++.+| |+|++|||||++.+++.+.+ + +|++|||+++|.+||+
T Consensus 58 ~~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~g~~VflDlK~~DIpnTv~~~a~~~~~~~lg~D~vTvh~~~G~~~l~ 137 (290)
T 3r89_A 58 DVCAIYKLQIAYYESYGIEGMIAYRDTLSYLREKDLLSIGDVKRSDIAASAKMYAKAHFEGDFETDFITLNPYMGMDSIE 137 (290)
T ss_dssp TSCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHHHHSGGGCCSEEEECCTTCGGGTG
T ss_pred CcceEEEecHHHHHhcCHHHHHHHHHHHHHHHHCCCeEEEEecccCcHHHHHHHHHHHhccccCCCEEEEcccCCHHHHH
Confidence 4555666667777666644332211 11112344555 99999999999999887665 5 9999999999999999
Q ss_pred HHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHh----hcCC---
Q psy4093 150 EIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQ----SFPG--- 222 (434)
Q Consensus 150 ~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~----~a~~--- 222 (434)
++++.+.+.+ +++++|+.||++++.+.++. ++... ..++.|+++++ .+.+
T Consensus 138 ~~~~~a~~~~--kgv~vL~~tSn~g~~d~q~~---~~~~g------------------~l~~~V~~~a~~~~~~~~g~~~ 194 (290)
T 3r89_A 138 PYEEYIEKGD--KGVFVLLRTSNPGAKDFEVL---PVDGE------------------EFFYKVGDKMRELNEKYIGKSG 194 (290)
T ss_dssp GGHHHHHTTS--CEEEEEEECCSGGGGTTTTC---EETTE------------------ETHHHHHHHHHHHHGGGCCTTS
T ss_pred HHHHHHHhcC--CeEEEEEeCCCCCHHHHhhc---ccCCC------------------CHHHHHHHHHHHHhhhccCCCC
Confidence 9999887655 78999999999876543332 11000 12355665554 3311
Q ss_pred -CCceEEeC---ccchh----hcCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCC----CEEEeCCcccCCC
Q psy4093 223 -LIAGLVCQ---APSVL----ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGA----DLGVVGRGITQAP 286 (434)
Q Consensus 223 -gv~GvVcs---~~e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GA----D~IVVGR~It~A~ 286 (434)
|.+|+||+ +.|+. .+++.| +++||||++ +.+++++. ..++ -+|.++|+|+.|.
T Consensus 195 ~g~~GvVvgAT~p~e~~~iR~~~~~~~-iL~PGiGaQ---------Gg~~~d~~-~~~~~g~g~lvn~SR~Il~a~ 259 (290)
T 3r89_A 195 FGPIGLVVGATHSEEVEKIRKRYDKMF-FLIPGFGAQ---------KADSMNVY-KLLEGLNGGVVNSSRAILKNW 259 (290)
T ss_dssp CEEEEEEECCCCHHHHHHHHHHTTTEE-EEECCCCSS---------HHHHHHHH-TTCBTTBSEEEEECHHHHTGG
T ss_pred CCceEEEECCCChHHHHHHHHhCCCCe-EEECCcCCC---------CCCHHHHH-HHHhcCCcEEEECCHHHHhCC
Confidence 26899999 45553 455555 788999987 44555555 4332 3888999999984
No 27
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.81 E-value=6.2e-20 Score=172.15 Aligned_cols=140 Identities=24% Similarity=0.322 Sum_probs=107.8
Q ss_pred hhhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhH
Q psy4093 112 IILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAIT 190 (434)
Q Consensus 112 ~dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~ 190 (434)
+|+|++||++|+..+++.+.+ ++|++|||+.+|.++++.+++.. ++.+++.|+.+ .+.+ ++.
T Consensus 56 ~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~~~-------gv~vl~~t~~~------~~~~-~~~--- 118 (208)
T 2czd_A 56 ADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDSVMAVKELG-------EIIMVVEMSHP------GALE-FIN--- 118 (208)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHTTS-------EEEEECCCCSG------GGGT-TTG---
T ss_pred EEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHhC-------CcEEEEecCCc------chhh-HHH---
Confidence 399999999999999987777 59999999999999988876432 35555554431 1111 000
Q ss_pred HHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCcc---chh----hcCCCceEecCcccccCCCCCCCCccCC
Q psy4093 191 LELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAP---SVL----ASNPGLLQLTPGIHLNQTGDNKGQQYNG 263 (434)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~---e~~----~~~~~~l~vtPGIr~~~~~~~~~dQ~~T 263 (434)
..++.+++++... |.+|++|++. +.. .++.++++++|||+++ ..+
T Consensus 119 -----------------~~v~~~~~~a~~~--G~~G~~~~~~~~~~i~~lr~~~~~~~~iv~gGI~~~---------g~~ 170 (208)
T 2czd_A 119 -----------------PLTDRFIEVANEI--EPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQ---------GGK 170 (208)
T ss_dssp -----------------GGHHHHHHHHHHH--CCSEEECCCSSTHHHHHHHHHSCTTCEEEECCCCSS---------TTH
T ss_pred -----------------HHHHHHHHHHHHh--CCcEEEECCCChHHHHHHHHhCCCCeEEEECCCCCC---------CCC
Confidence 1235677777665 7999999996 332 4555688899999985 346
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
|.+++ ++|||++||||+|++++||.++++++++
T Consensus 171 ~~~~~-~aGad~vvvGr~I~~a~dp~~~~~~l~~ 203 (208)
T 2czd_A 171 AKDAV-KAGADYIIVGRAIYNAPNPREAAKAIYD 203 (208)
T ss_dssp HHHHH-HHTCSEEEECHHHHTSSSHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEEChHHhcCCCHHHHHHHHHH
Confidence 99999 9999999999999999999999999987
No 28
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=99.81 E-value=7.3e-21 Score=183.33 Aligned_cols=80 Identities=20% Similarity=0.187 Sum_probs=70.7
Q ss_pred HHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHH
Q psy4093 335 DIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSL 414 (434)
Q Consensus 335 ~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~ 414 (434)
+||++|+++||||||+++.+++++++++++|++|++|+|+++|.++|++++++|+ ++||+||+|+|||||||||++
T Consensus 2 ~~m~~k~~~LivALD~~~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~~~v~~L~----~~g~~iflDlK~~DI~nTv~~ 77 (239)
T 3tr2_A 2 NAMEKPDPKVIVAIDAGTVEQARAQINPLTPELCHLKIGSILFTRYGPAFVEELM----QKGYRIFLDLKFYDIPQTVAG 77 (239)
T ss_dssp ------CCCEEEECCCSSHHHHHHHHTTCCTTTCEEEEEHHHHHHHHHHHHHHHH----HTTCCEEEEEEECSCHHHHHH
T ss_pred hhHhhCCCCeEEEeCCCCHHHHHHHHHHhCCcccEEEeCHHHHHhhCHHHHHHHH----hcCCCEEEEecccccchHHHH
Confidence 6899999999999999999999999999999999999999999999999999996 379999999999999999998
Q ss_pred Hhhc
Q psy4093 415 RFRD 418 (434)
Q Consensus 415 a~~~ 418 (434)
+++.
T Consensus 78 ~~~~ 81 (239)
T 3tr2_A 78 ACRA 81 (239)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 29
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.80 E-value=9.5e-21 Score=202.88 Aligned_cols=99 Identities=38% Similarity=0.627 Sum_probs=81.3
Q ss_pred cCCCCCccccCCC-CCcccccccccCCCCeecEEEcCCc---------------------------------------cc
Q psy4093 17 SGQFEGDIMLEGP-ERTGVISSIDRWPGGLIPYYIDDDH---------------------------------------FC 56 (434)
Q Consensus 17 ~g~~EGDi~l~~~-~rng~~~~~~rWPn~~VpY~I~~~~---------------------------------------~c 56 (434)
..+|||||+++++ .||+++++.+|||| +|||+|++++ ||
T Consensus 24 ~~lfeGDI~l~~~~~rn~~~~~~~rWp~-~IPY~i~~~~~~~~~~~I~~Am~~~~~~TCIrF~pr~~e~~yi~i~~~~GC 102 (592)
T 4gwm_A 24 LDLFEGDIRLDRAQIRNSIIGEKYRWPH-TIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGC 102 (592)
T ss_dssp CCCBTTTBCCCTTCCTTCCCCGGGCCCS-EEEEEECTTSCHHHHHHHHHHHHHHHHHSSCEEEECSSCSSEEEEECCSSE
T ss_pred CCeeccccCCCchhhhhhhcCccccCCc-eEEEEECCCCCHHHHHHHHHHHHHHHhCCceeeEECCCCCCeEEEecCCcE
Confidence 3579999999854 69999999999996 8999998774 23
Q ss_pred -----------------------------------------------------------ccccccccCCCCcccCccccc
Q psy4093 57 -----------------------------------------------------------TERNFKKYPPSEITDFGVGYD 77 (434)
Q Consensus 57 -----------------------------------------------------------~~~NF~k~~~~~~~~~g~pYD 77 (434)
+++||+|++...++++|+|||
T Consensus 103 ~S~vG~~~gg~Q~lsl~~gC~~~Gti~HEl~HALGf~HEqsR~DRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYD 182 (592)
T 4gwm_A 103 WSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYD 182 (592)
T ss_dssp EECSSCCCSSEEEEEECTTCCCHHHHHHHHHHHHTCCCSTTSTTGGGTEEECGGGBCTTCGGGGCCCCC------CCCCC
T ss_pred eeeeCccCCCceEEeeCCCcCCCChHHHHHHHHhcccccccCcCccceEEEehhhcCcchhhHHhhcCccccccCCCCcC
Confidence 678999999999999999999
Q ss_pred cceecccchhhhccCCCccccccc-----hhchhhhHHHhhhcc
Q psy4093 78 FDSVMHYSRKAFSKNGDDTIVPHF-----VMAQNVLWSIIILKL 116 (434)
Q Consensus 78 y~SVMhYg~~aFs~~g~~Ti~~~~-----~igqr~~~si~dlKl 116 (434)
|+|||||++++||++|++||+++. .+|||.++|..|++.
T Consensus 183 y~SVMHY~~~aFs~~~~~Ti~~~~~~~~~~iGqr~~lS~~Di~~ 226 (592)
T 4gwm_A 183 YTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLK 226 (592)
T ss_dssp TTCTTSCCTTTTBSSSSCSEEESSGGGTTTTTCCSSCCHHHHHH
T ss_pred CCccCcCCCCccccCCcceEEecCCCccCCccccccCcHHHHHH
Confidence 999999999999999999999864 599999999887543
No 30
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=99.77 E-value=1.9e-19 Score=178.64 Aligned_cols=84 Identities=21% Similarity=0.149 Sum_probs=70.5
Q ss_pred HHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchh
Q psy4093 331 STLLDIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILS 410 (434)
Q Consensus 331 ~~l~~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpn 410 (434)
.+|+++|+.|+++||||||+++.+++++++++++|++|++|+|+++|.++|++++++|++ .+||+||+|+|||||||
T Consensus 14 ~~l~~~~~~k~~~LiVALD~~~~~eal~l~~~l~~~v~~vKVG~~lf~~~G~~~V~~Lk~---~~g~~IflDlKl~DIpn 90 (303)
T 3ru6_A 14 GTENLYFQSNAMKLCVALDLSTKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIEELKK---VDDFKIFLDLKFHDIPN 90 (303)
T ss_dssp ----------CCEEEEECCCSSHHHHHHHHHHTTTSSCEEEECHHHHHHHTHHHHHHHHH---HCCCEEEEEEEECSCHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHhCCCccEEEeCHHHHHHhCHHHHHHHHH---hhCCCEEEEeeeccCch
Confidence 478999999999999999999999999999999999999999999999999999999864 35999999999999999
Q ss_pred HHHHHhh
Q psy4093 411 SFSLRFR 417 (434)
Q Consensus 411 TV~~a~~ 417 (434)
||+++++
T Consensus 91 Tv~~av~ 97 (303)
T 3ru6_A 91 TMADACE 97 (303)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9998886
No 31
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=99.73 E-value=3.9e-19 Score=169.92 Aligned_cols=85 Identities=18% Similarity=0.118 Sum_probs=76.5
Q ss_pred hHHHHHHhhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcch
Q psy4093 330 SSTLLDIMVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPIL 409 (434)
Q Consensus 330 ~~~l~~~m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIp 409 (434)
.+|||+||+. +++||||+|+++.++++++++++++++|++|+|+++|.++|++++++|++ .+|++||+|+||||||
T Consensus 2 ~~~~~~~m~~-~~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~l~~---~~g~~v~lD~Kl~Dip 77 (228)
T 3m47_A 2 RSRRVDVMDV-MNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRK---RFGCRIIADFKVADIP 77 (228)
T ss_dssp ---CTTSCCC-GGGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHHHHH---HHCCEEEEEEEECSCH
T ss_pred cchHHHHhhc-CCCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHHHHh---cCCCeEEEEEeecccH
Confidence 4789999997 88999999999999999999999999999999999999999999999864 2699999999999999
Q ss_pred hHHHHHhhc
Q psy4093 410 SSFSLRFRD 418 (434)
Q Consensus 410 nTV~~a~~~ 418 (434)
|||+++++.
T Consensus 78 nTv~~~~~~ 86 (228)
T 3m47_A 78 ETNEKICRA 86 (228)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999887654
No 32
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=99.73 E-value=3.5e-18 Score=166.10 Aligned_cols=87 Identities=18% Similarity=0.115 Sum_probs=74.5
Q ss_pred hHHHHHHhhhcCCcEEEEecCCC------HHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHh--cCCCeeee
Q psy4093 330 SSTLLDIMVKKKSNLCVALDVTQ------AKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAK--QHEFLRSR 401 (434)
Q Consensus 330 ~~~l~~~m~~k~s~LivAlD~~~------~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~--k~gf~iFl 401 (434)
..||.+. +|+++|||+||.+. .+.+++++++++|++|++|+|+++|.++|+++++.|+++.+ ++||+||+
T Consensus 4 ~~~l~~~--~~~~~LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~~g~~Vfl 81 (255)
T 3qw3_A 4 FDLLNER--AKRSLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVL 81 (255)
T ss_dssp HHHHHHH--HTTCCEEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSCTTCCBEE
T ss_pred HHHHHHH--hcCCCEEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhcCCCeEEE
Confidence 3556665 78999999999886 68899999999999999999999999999986666666544 37999999
Q ss_pred cCCCCcchhHHHHHhhc
Q psy4093 402 NGWFSPILSSFSLRFRD 418 (434)
Q Consensus 402 DlKf~DIpnTV~~a~~~ 418 (434)
|+|||||||||+.+.++
T Consensus 82 DlK~~DI~nTv~~~a~~ 98 (255)
T 3qw3_A 82 DAKRGDIADTADAYATS 98 (255)
T ss_dssp EEEECCCHHHHHHHHHH
T ss_pred EeecCCcHHHHHHHHHH
Confidence 99999999999776644
No 33
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=99.73 E-value=2.5e-18 Score=169.20 Aligned_cols=91 Identities=23% Similarity=0.221 Sum_probs=78.3
Q ss_pred chhhHHHHHHhhhcCCcEEEEecCCCH---------------HHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHH--
Q psy4093 327 CRISSTLLDIMVKKKSNLCVALDVTQA---------------KDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELT-- 389 (434)
Q Consensus 327 ~~~~~~l~~~m~~k~s~LivAlD~~~~---------------~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~-- 389 (434)
.+..+||+++|++| ++|||++|.... +.+++++++++|++|++|+|+++|.++|++.++.|+
T Consensus 9 ~~f~~rL~~~~~~~-~~LcvglDp~~~~lp~~~l~~~~~~~~~~~~~ivd~l~~~v~~~Kvg~~lf~~~G~~G~~~l~~~ 87 (284)
T 3l52_A 9 EPFGARLSRAMDDR-GPLCVGIDPHASLLADWGLSDDVAGLERFSRTVVEALGEHVAVFKPQSAFFERFGSRGVAVLEKT 87 (284)
T ss_dssp CCHHHHHHHHHHHH-CSCEEEECCCHHHHHHTTCCSSHHHHHHHHHHHHHHHTTTCSEEEEBHHHHHTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhc-CCeEEEECCChhhccccccccchHHHHHHHHHHHHHhCCcceEEEeeHHHHHhcCHHHHHHHHHH
Confidence 36888999999986 579999999887 899999999999999999999999999998443333
Q ss_pred -HHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 390 -ALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 390 -~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
+.++++||+||+|+|||||||||+++.++
T Consensus 88 i~~l~~~g~~VflDlK~~DIpnTv~~ya~~ 117 (284)
T 3l52_A 88 VAEARAAGALVVMDAKRGDIGSTMAAYAEA 117 (284)
T ss_dssp HHHHHHTTCEEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEEecccCcHHHHHHHHHH
Confidence 33456899999999999999999886654
No 34
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=99.72 E-value=2.3e-18 Score=167.70 Aligned_cols=75 Identities=17% Similarity=0.135 Sum_probs=70.0
Q ss_pred CCcEEEEecCCCHHHHHHHHHHhCCce-eEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhcC
Q psy4093 341 KSNLCVALDVTQAKDLLTLTRQLGPHI-AVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRDD 419 (434)
Q Consensus 341 ~s~LivAlD~~~~~~al~la~~lgp~i-~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~~ 419 (434)
+++||||||+++.+++++|+++++|++ |++|+|++||.++|++++++|++ .||+||+|+|||||||||+.+++.-
T Consensus 4 ~~~LivALD~~~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~~v~~Lk~----~g~~VflDlK~~DIpnTv~~a~~~~ 79 (259)
T 3tfx_A 4 DRPVIVALDLDNEEQLNKILSKLGDPHDVFVKVGMELFYNAGIDVIKKLTQ----QGYKIFLDLKMHDIPNTVYNGAKAL 79 (259)
T ss_dssp CCCEEEECCCSCHHHHHHHHHTTCCGGGCEEEECHHHHHHHCHHHHHHHHH----TTCEEEEEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCHHHHHHHHHHhCcccceEEEeCHHHHHhcCHHHHHHHHH----CCCcEEEEecccccchHHHHHHHHH
Confidence 468999999999999999999999999 99999999999999999999964 5999999999999999999877653
No 35
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=99.71 E-value=4.1e-18 Score=168.19 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=78.3
Q ss_pred hhHHHHHHhhhcCCcEEEEecCCC-------------HHHH----HHHHHHhCCceeEEeEceeeeecCCHHHHHHHH--
Q psy4093 329 ISSTLLDIMVKKKSNLCVALDVTQ-------------AKDL----LTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELT-- 389 (434)
Q Consensus 329 ~~~~l~~~m~~k~s~LivAlD~~~-------------~~~a----l~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~-- 389 (434)
..+||++. .+|+++|||++|... .+.+ ++++++++|++|++|+|+++|.++|+++++.|+
T Consensus 6 ~~~rL~~~-~~k~s~LcvglDp~~~~lp~~~~~~~~~~~~l~~f~~~ivd~l~~~v~~~Kvg~~lf~~~G~~~v~~L~~~ 84 (290)
T 3r89_A 6 IIDKLYEK-VSKNGFVCIGLDSSIDYIPENMKAGKSVSEALFSYNKEIIDQTYDVCAIYKLQIAYYESYGIEGMIAYRDT 84 (290)
T ss_dssp HHHHHHHH-HHHHCSEEEECCCCGGGSCHHHHTTCCHHHHHHHHHHHHHHHHTTSCSEEEEEHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHH-HHhCCCEEEEECCChhhCchhhccccchHHHHHHHHHHHHHHhCCcceEEEecHHHHHhcCHHHHHHHHHH
Confidence 66889999 889999999999876 3454 899999999999999999999999999887664
Q ss_pred -HHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 390 -ALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 390 -~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
+.++++||+||+|+|||||||||+++.++
T Consensus 85 i~~~~~~g~~VflDlK~~DIpnTv~~~a~~ 114 (290)
T 3r89_A 85 LSYLREKDLLSIGDVKRSDIAASAKMYAKA 114 (290)
T ss_dssp HHHHHHTTCCEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEecccCcHHHHHHHHHH
Confidence 45677899999999999999999876654
No 36
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=99.71 E-value=2.4e-18 Score=167.15 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=69.9
Q ss_pred CCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 341 KSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 341 ~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
+++||||||+++.+++++++++++|++|++|+|+++|.++|++++++|++ +||+||+|+|||||||||+++++.
T Consensus 27 ~~~LivALD~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~Lk~----~g~~VflDlK~~DIpnTv~~a~~~ 100 (255)
T 3ldv_A 27 DPKVIVALDYDNLADALAFVDKIDPSTCRLKVGKEMFTLFGPDFVRELHK----RGFSVFLDLKFHDIPNTCSKAVKA 100 (255)
T ss_dssp CCCEEEEECCSSHHHHHHHHTTSCGGGCEEEEEHHHHHHHHHHHHHHHHH----TTCCEEEEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEcCCCCHHHHHHHHHHhCCcCcEEEeCHHHHHhhCHHHHHHHHh----cCCCEEEEEecccchhHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999963 799999999999999999988764
No 37
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=99.70 E-value=2e-18 Score=163.82 Aligned_cols=71 Identities=17% Similarity=0.129 Sum_probs=66.0
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
+|||||||+ +++++++++++|++|++|+|+++|.++|++++++|++ ++||+||+|+|||||||||+++++.
T Consensus 2 ~~livALD~---~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~---~~g~~VflDlK~~DIpnTv~~a~~~ 72 (215)
T 3ve9_A 2 NRVILSLDS---PIPEETLRKLNGKVAGIKVGWPLLLNLGKEKVKELVG---LVDGIKILDLKLADIDNTMILIVDE 72 (215)
T ss_dssp CCEEEEESS---CCCHHHHHHHHTTSSEEEEEHHHHHHHCHHHHHHHHT---TCCSEEEEEEEECSCHHHHHHHHHH
T ss_pred CCeEEECCH---HHHHHHHHHhCCcCcEEEecHHHHHhhCHHHHHHHHH---hcCCcEEEEecccCchhHHHHHHHH
Confidence 689999999 9999999999999999999999999999999988852 3799999999999999999988754
No 38
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=99.70 E-value=6.8e-18 Score=160.55 Aligned_cols=79 Identities=18% Similarity=0.171 Sum_probs=72.1
Q ss_pred hhhcCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcC-CCeeeecCCCCcchhHHHHH
Q psy4093 337 MVKKKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQH-EFLRSRNGWFSPILSSFSLR 415 (434)
Q Consensus 337 m~~k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~-gf~iFlDlKf~DIpnTV~~a 415 (434)
|++|+++||||||+++.++++++++++++++|++|+|.++|.++|+++|++|++ .+ |++||+|+|||||||||..+
T Consensus 1 ~~~~~~~livAlD~~~~~~a~~~~~~~~~~~~~ikvg~~lf~~~G~~~v~~l~~---~~p~~~iflDlKl~Dip~t~~~~ 77 (221)
T 3exr_A 1 MTKQLPNLQVALDHSNLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVLRS---LFPDKIIVADTKCADAGGTVAKN 77 (221)
T ss_dssp --CCCCEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHH---HCTTSEEEEEEEECSCHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHhhCCCceEEEECHHHHHhcCHHHHHHHHH---hCCCCcEEEEEEeeccHHHHHHH
Confidence 788899999999999999999999999999999999999999999999999964 34 89999999999999999998
Q ss_pred hhc
Q psy4093 416 FRD 418 (434)
Q Consensus 416 ~~~ 418 (434)
+..
T Consensus 78 ~~~ 80 (221)
T 3exr_A 78 NAV 80 (221)
T ss_dssp HHT
T ss_pred HHH
Confidence 643
No 39
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=99.69 E-value=6e-18 Score=161.29 Aligned_cols=73 Identities=14% Similarity=0.032 Sum_probs=67.4
Q ss_pred CCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCC-eeeecCCCCcchhHHHHHhhcC
Q psy4093 341 KSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEF-LRSRNGWFSPILSSFSLRFRDD 419 (434)
Q Consensus 341 ~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf-~iFlDlKf~DIpnTV~~a~~~~ 419 (434)
.++||||||++ ++++++++++|++|++|+|+++|.++|++++++|++ .+|| +||+|+|||||||||++++++-
T Consensus 3 ~~~livALD~~---~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~---~~~~~~VflDlK~~DI~nTv~~~~~~~ 76 (222)
T 4dbe_A 3 KSRVILAMDKP---LSYQVLKEMENELYGIKVGLPLVLDLGVDKTRELLI---GLDVEEIIVDFKLADIGYIMKSIVERL 76 (222)
T ss_dssp CCCEEEEESSC---CCHHHHHHHGGGCSEEEEEHHHHHHHCHHHHHHHHH---TCCCSEEEEEEEECSCHHHHHHHHTTC
T ss_pred CCCeEEECCHH---HHHHHHHHhCCcCcEEEECHHHHHhhCHHHHHHHHH---hcCCCeEEEEeeecchHHHHHHHHHHH
Confidence 57899999999 999999999999999999999999999999999964 2699 9999999999999999877653
No 40
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.63 E-value=4.4e-17 Score=153.44 Aligned_cols=169 Identities=20% Similarity=0.172 Sum_probs=106.6
Q ss_pred chhhhccCCCccccccchhchhhhHHHh-hhcccCHHHHHHHHHHHhccccceEEEcccCCchhHHHHHHHhhhhCCCCc
Q psy4093 85 SRKAFSKNGDDTIVPHFVMAQNVLWSII-ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISDELGEDRG 163 (434)
Q Consensus 85 g~~aFs~~g~~Ti~~~~~igqr~~~si~-dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~~ 163 (434)
+-..|-..|.+.|....... .+..++ |+|++|||+|+... ....++|++|||+.+|.+|++++++..++.| .+
T Consensus 35 ~~~~f~~~G~~~i~~l~~~~--p~~~v~lD~kl~dip~t~~~~--~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g--~~ 108 (216)
T 1q6o_A 35 GTILCVGEGVRAVRDLKALY--PHKIVLADAKIADAGKILSRM--CFEANADWVTVICCADINTAKGALDVAKEFN--GD 108 (216)
T ss_dssp CHHHHHHHCTHHHHHHHHHC--TTSEEEEEEEECSCHHHHHHH--HHHTTCSEEEEETTSCHHHHHHHHHHHHHTT--CE
T ss_pred CHHHHHHhCHHHHHHHHHhC--CCCeEEEEEEecccHHHHHHH--HHhCCCCEEEEeccCCHHHHHHHHHHHHHcC--CC
Confidence 34445444555543332210 012334 99999999998763 3334799999999999999999988877655 33
Q ss_pred eEEEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHH---HHHhhcCCCCceEEeCccchh----h
Q psy4093 164 VFLIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETL---KLAQSFPGLIAGLVCQAPSVL----A 236 (434)
Q Consensus 164 v~~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~---~lA~~a~~gv~GvVcs~~e~~----~ 236 (434)
+ .+..++..++...+.+.+.|+ . +.++ .++... |.+| +..+.. .
T Consensus 109 ~-~~~ll~~~t~~~~~~l~~~~~------------~-----------~~vl~~a~~~~~~--G~~g---~~~~i~~lr~~ 159 (216)
T 1q6o_A 109 V-QIELTGYWTWEQAQQWRDAGI------------G-----------QVVYHRSRDAQAA--GVAW---GEADITAIKRL 159 (216)
T ss_dssp E-EEEECSCCCHHHHHHHHHTTC------------C-----------EEEEECCHHHHHT--TCCC---CHHHHHHHHHH
T ss_pred c-eeeeeeCCChhhHHHHHhcCc------------H-----------HHHHHHHHHHHhc--CCCC---CHHHHHHHHHh
Confidence 2 121221111111222222111 1 1223 344333 5666 444432 3
Q ss_pred cCCCc-eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 237 SNPGL-LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 237 ~~~~~-l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
++.++ +.++|||+++ ++.+++ ++|||++||||+|++++||.++++++++ .|+
T Consensus 160 ~~~~~~i~v~GGI~~~-----------~~~~~~-~aGad~ivvG~~I~~a~dp~~~~~~~~~-~i~ 212 (216)
T 1q6o_A 160 SDMGFKVTVTGGLALE-----------DLPLFK-GIPIHVFIAGRSIRDAASPVEAARQFKR-SIA 212 (216)
T ss_dssp HHTTCEEEEESSCCGG-----------GGGGGT-TSCCSEEEESHHHHTSSCHHHHHHHHHH-HHH
T ss_pred cCCCCcEEEECCcChh-----------hHHHHH-HcCCCEEEEeehhcCCCCHHHHHHHHHH-HHH
Confidence 44467 7999999986 468899 9999999999999999999999999987 554
No 41
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=99.62 E-value=3.1e-16 Score=158.50 Aligned_cols=92 Identities=9% Similarity=0.050 Sum_probs=79.0
Q ss_pred chhhHHHHHHhhhcCCcEEEEecCCCH----------------------------------------------------H
Q psy4093 327 CRISSTLLDIMVKKKSNLCVALDVTQA----------------------------------------------------K 354 (434)
Q Consensus 327 ~~~~~~l~~~m~~k~s~LivAlD~~~~----------------------------------------------------~ 354 (434)
++...||++.|.+|+++|||.||.... +
T Consensus 19 ~~f~~rL~~~~~~~~s~LcvGlDp~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (352)
T 2fds_A 19 SHFKTKLKNRRNEVNTCLCIGLDPDEDDIKNFMRNEEKNGYKNVKNNMNSNNNRIENVIKIGKEILLTDEENIENLSEED 98 (352)
T ss_dssp -CHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHTTTTSHHHHHHHC-CTTHHHHHCCSSHHHHTCCGGGGGGSCHHH
T ss_pred ChHHHHHHHHHHHhCCCeEEEECCChHHhhhhhhhhhhhcccchhhccccccccccccccccccccccccccccchhhhH
Confidence 578999999999999999999998544 2
Q ss_pred HH--------HHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHH---HhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 355 DL--------LTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTAL---AKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 355 ~a--------l~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~l---a~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
++ ++++++++|++|++|+|+++|.++|++++..|+++ ++++||+||+|+|||||||||+++.++
T Consensus 99 ~~~~~~~~f~~~iida~~~~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~g~~VflDlK~~DIgnTv~~ya~a 173 (352)
T 2fds_A 99 KFFYFFNHFCFYIINNTKEYALIYKMNFAFYIPYGSVGINALKNVFDYLNSMNIPTMLDMKINDIGNTVKNYRKF 173 (352)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCEEEecHHHHHhCCHHHHHHHHHHHHHHHHCCCeEEEEeecCchHHHHHHHHHH
Confidence 33 79999999999999999999999999998655542 456899999999999999999987554
No 42
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.59 E-value=8.9e-16 Score=160.20 Aligned_cols=87 Identities=18% Similarity=0.115 Sum_probs=75.8
Q ss_pred hHHHHHHhhhcCCcEEEEecCCC------HHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHh--cCCCeeee
Q psy4093 330 SSTLLDIMVKKKSNLCVALDVTQ------AKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAK--QHEFLRSR 401 (434)
Q Consensus 330 ~~~l~~~m~~k~s~LivAlD~~~------~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~--k~gf~iFl 401 (434)
..||.+. +++++||||||+++ .+.+++++++++|++|++|+|+++|.++|+++++.|+++.+ +.|++||+
T Consensus 5 ~~~l~~~--~~~~~l~vaLD~~~~~~~~~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~L~~~~~~~~~g~~Vfl 82 (453)
T 3qw4_B 5 FDLLNER--AKRSLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVPAGIPVVL 82 (453)
T ss_dssp HHHHHHH--TTTCCEEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTHHHHHHHHHHHHHTSCTTSCBEE
T ss_pred HHHHHHH--hhCCCEEEEeCCCcccccHHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHhhcCCCeEEE
Confidence 3455555 77899999999999 89999999999999999999999999999999999975311 14999999
Q ss_pred cCCCCcchhHHHHHhhc
Q psy4093 402 NGWFSPILSSFSLRFRD 418 (434)
Q Consensus 402 DlKf~DIpnTV~~a~~~ 418 (434)
|+|||||||||+.+.++
T Consensus 83 DlK~~DIpnT~~~~a~~ 99 (453)
T 3qw4_B 83 DAKRGDIADTADAYATS 99 (453)
T ss_dssp EEEECCCHHHHHHHHHH
T ss_pred EeecCChHHHHHHHHHH
Confidence 99999999999987755
No 43
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=99.58 E-value=3.4e-16 Score=147.11 Aligned_cols=108 Identities=34% Similarity=0.553 Sum_probs=87.5
Q ss_pred ccccCCCCCCcccccCCCCCccccCCCCCc-ccccccccCCCCeecEEEcCCccc-------------------------
Q psy4093 3 SLWKNRPSLNFWEESGQFEGDIMLEGPERT-GVISSIDRWPGGLIPYYIDDDHFC------------------------- 56 (434)
Q Consensus 3 ~~~~~~~~~~~~e~~g~~EGDi~l~~~~rn-g~~~~~~rWPn~~VpY~I~~~~~c------------------------- 56 (434)
..|++.++++|.+..+ |.|.+. ...+. ||++...|..++.....+.. +|
T Consensus 36 ~~w~~~TCIrFv~~t~--e~dyI~-f~~~~~GC~S~vG~~g~~~q~~sl~~--~C~~~g~i~HEl~HalGf~HE~~R~DR 110 (201)
T 3edh_A 36 RHWEKHTCVTFLERTD--EDSYIV-FTYRPCGCCSYVGRRGGGPQAISIGK--NCDKFGIVVHELGHVVGFWHEHTRPDR 110 (201)
T ss_dssp HHHHHHSSCEEEECSS--CSSEEE-EEECCSCSCCCSSCCCSSEEEEEECG--GGCSHHHHHHHHHHHHTBCCGGGSTTG
T ss_pred HHHHhhccceEEEcCC--CCcEEE-EEcCCCCCccccCCcCCceeeeecCC--CcCccchhHHHHHHHhcchhhhhhhcc
Confidence 4688999999999874 456543 23344 99998888887766666654 34
Q ss_pred --------------ccccccccCCCCcccCccccccceecccchhhhccC-CCccccccc-------hhchhhhHHHhhh
Q psy4093 57 --------------TERNFKKYPPSEITDFGVGYDFDSVMHYSRKAFSKN-GDDTIVPHF-------VMAQNVLWSIIIL 114 (434)
Q Consensus 57 --------------~~~NF~k~~~~~~~~~g~pYDy~SVMhYg~~aFs~~-g~~Ti~~~~-------~igqr~~~si~dl 114 (434)
+++||+|++...++++|+||||+|||||++++||++ |++||+|+. .+|||.++|..|+
T Consensus 111 D~yV~I~~~ni~~~~~~nF~k~~~~~~~~~g~~YDy~SvMHY~~~aFs~~~~~~Ti~p~~~~~~~~~~iGqr~~lS~~Di 190 (201)
T 3edh_A 111 DRHVSIVRENIQPGQEYNFLKMEPQEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKYEVNGVKPPIGQRTRLSKGDI 190 (201)
T ss_dssp GGTEEECGGGBCTTCGGGGCCCCGGGBCCTTCCCCTTCTTCCCTTTTBSSTTSCSEEESSCBTTBCCCCCCCSSCCHHHH
T ss_pred CcEEEEehhccCcchhHhhhcCChhhccccCCccCCCCcccCCCccccCCCCCCceEeCCCCCcccccCcccCCCCHHHH
Confidence 678999999999999999999999999999999997 799999863 5899999997775
Q ss_pred c
Q psy4093 115 K 115 (434)
Q Consensus 115 K 115 (434)
+
T Consensus 191 ~ 191 (201)
T 3edh_A 191 A 191 (201)
T ss_dssp H
T ss_pred H
Confidence 4
No 44
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=99.56 E-value=8.2e-16 Score=144.33 Aligned_cols=56 Identities=32% Similarity=0.417 Sum_probs=49.4
Q ss_pred ccccccccCCCCcccCccccccceecccchhhhccC-CCccccccc----hhchhhhHHHhhhc
Q psy4093 57 TERNFKKYPPSEITDFGVGYDFDSVMHYSRKAFSKN-GDDTIVPHF----VMAQNVLWSIIILK 115 (434)
Q Consensus 57 ~~~NF~k~~~~~~~~~g~pYDy~SVMhYg~~aFs~~-g~~Ti~~~~----~igqr~~~si~dlK 115 (434)
+++||+|++ ++++|+||||+|||||++++||+| |++||+|+. .+|||.++|..|++
T Consensus 131 ~~~nF~k~~---~~~~~~pYDy~SvMHY~~~aFs~n~g~~Ti~~~~~~~~~iGqr~~lS~~Di~ 191 (199)
T 3lqb_A 131 MAYNFLKQK---TNNQNTPYDYGSLMHYGKTAFAIQPGLETITPIPDENVQIGQRQGLSKIDIL 191 (199)
T ss_dssp CGGGGCCCC---BCCTTCCCCTTCTTCCCTTTTBSSTTCCSEEESSCTTSCCCCCSSCCHHHHH
T ss_pred hhhhccccc---ccccCCcCCCCcccCCCCcccccCCCCCeEEECCCCCCCcccccCCCHHHHH
Confidence 578999986 467999999999999999999999 999999973 69999999977743
No 45
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=99.56 E-value=5.6e-16 Score=155.84 Aligned_cols=141 Identities=9% Similarity=-0.056 Sum_probs=108.0
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChhhhhhhccchhhHHHHHHhhhcCCc
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFETRKADVKCRISSTLLDIMVKKKSN 343 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k~s~ 343 (434)
..+.+ +.--..++|| -.+||...-+-++++..+.|- .++...+ +|..+ .-.+.|+|+.+..+|++|
T Consensus 26 l~~~i-~~~~~~~~vg----lDp~~~~~p~~~~~~~~~~~~-~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~ 91 (342)
T 3n3m_A 26 LEKRR-NAINTCLCIG----LDPDEKDIENFMKNEKENNYN-NIKKNLK-------EKYIN-NVSIKKDILLKAPDNIIR 91 (342)
T ss_dssp HHHHH-HHHCCCEEEE----CCCCHHHHHHHHHHHHHTTTH-HHHHHHT-------CGGGG-GCSSCHHHHTSCHHHHHH
T ss_pred HHHHH-HhhCCceEEe----cCCChHHhHHHHHHHHhhhhc-ccccccc-------ccccc-chhhhhhhhhhhhhhccc
Confidence 35556 3444568888 457788777788777666666 5543222 33331 235999999999999999
Q ss_pred EEEEecCCCHHH--HHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHH---HhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 344 LCVALDVTQAKD--LLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTAL---AKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 344 LivAlD~~~~~~--al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~l---a~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
|+.+.|+-..-. +++|+++++|++|++|+|+++|.++|+++++.|+++ ++++||+||+|+|||||||||+.++++
T Consensus 92 ~~~~~~~~~~~~~f~~~lvd~l~~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DIpnTv~~ya~~ 171 (342)
T 3n3m_A 92 EEKSEEFFYFFNHFCFYIINETNKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDIGNTVKNYRKF 171 (342)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHGGGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcCcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCcHHHHHHHHHH
Confidence 999888766555 789999999999999999999999998877555543 456899999999999999999887664
No 46
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=99.49 E-value=9.2e-15 Score=140.10 Aligned_cols=74 Identities=14% Similarity=0.109 Sum_probs=68.5
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 340 KKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 340 k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
++++||+|+|+++.+++++++++++++++++|+|+++|..+|+++++.|++ +|++||+|+|||||||||++.++
T Consensus 2 ~~~~lilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~~l~~----~~~~v~lD~kl~Dip~t~~~~~~ 75 (239)
T 1dbt_A 2 KNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKE----RNCELFLDLKLHDIPTTVNKAMK 75 (239)
T ss_dssp CCSSCEEECCCSSHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHHHHHH----TTCEEEEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHHHHHH----CCCcEEEEeccccchHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999963 68999999999999999987543
No 47
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=99.45 E-value=3.9e-14 Score=136.41 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=66.5
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHh
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRF 416 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~ 416 (434)
++||+|+|+++.+++++++++++++++++|+|+++|..+|+++++.|++ +|++||+|+|||||||||+.++
T Consensus 5 ~~lilalD~~~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~v~~lr~----~~~~v~lD~kl~Dip~t~~~~~ 75 (246)
T 2yyu_A 5 TPFIVALDFPSKQEVERFLRPFAGTPLFVKVGMELYYQEGPAIVAFLKE----QGHAVFLDLKLHDIPNTVKQAM 75 (246)
T ss_dssp CCEEEECCCSSHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHHHHHHHH----TTCEEEEEEEECSCHHHHHHHH
T ss_pred CCeEEEeCCCCHHHHHHHHHHhcccccEEEeCHHHHHHhCHHHHHHHHH----CCCeEEEEeecccchHHHHHHH
Confidence 5899999999999999999999999999999999999999999999964 6899999999999999987744
No 48
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=99.44 E-value=3.2e-14 Score=137.00 Aligned_cols=73 Identities=22% Similarity=0.240 Sum_probs=67.9
Q ss_pred cCCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHh
Q psy4093 340 KKSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRF 416 (434)
Q Consensus 340 k~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~ 416 (434)
|++++|+|+|+++.+++++++++++++++++|+|+++|..+|+++++.|++ +|++||+|+|||||||||++.+
T Consensus 13 ~~~~~ilalD~~~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~~lr~----~~~~v~lD~kl~Dip~t~~~~i 85 (245)
T 1eix_A 13 TNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQ----RGFDIFLDLKFHDIPNTAAHAV 85 (245)
T ss_dssp CCCCEEEEECCSSHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHHHHHHHHH----TTCCEEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEECCCCHHHHHHHHHHhCccCcEEEEcHHHHHHhCHHHHHHHHH----CCCcEEEEeeccccHHHHHHHH
Confidence 468899999999999999999999999999999999999999999999964 6899999999999999988743
No 49
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=99.35 E-value=2e-13 Score=129.16 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=61.0
Q ss_pred EEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 346 VALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 346 vAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
-.+|+++.+++++++++++++ +++|+|+++|. +|++++++|+ ++|++||+|+|||||||||+.+++.
T Consensus 14 ~~~D~~~~~~a~~i~~~~~~~-~~~Kvg~~l~~-~G~~~v~~l~----~~~~~v~lD~K~~DI~nT~~~~v~~ 80 (213)
T 1vqt_A 14 TPVLSLDMEDPIRFIDENGSF-EVVKVGHNLAI-HGKKIFDELA----KRNLKIILDLKFCDIPSTVERSIKS 80 (213)
T ss_dssp EEEEECCSSSHHHHHHHHCCC-SEEEECHHHHT-TCTHHHHHHH----TTTCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhCCC-CEEEECHHHHh-hCHHHHHHHH----HCCCCEEEEeecccCchHHHHHHHH
Confidence 468999999999999999999 55999999999 9999999985 4799999999999999999987643
No 50
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=99.32 E-value=1.1e-12 Score=132.70 Aligned_cols=61 Identities=5% Similarity=-0.110 Sum_probs=52.0
Q ss_pred HHHHHHhCCceeEEeEceeeeecCCHHHHHHHH---HHHhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 357 LTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELT---ALAKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 357 l~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~---~la~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
+++++++++++|++|+|+++|.++|+++++.|+ +.++++|++||+|+|+|||||||+++.+
T Consensus 119 ~~ivdal~~~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~g~~VflDlK~~DIgnTva~ya~ 182 (353)
T 2ffc_A 119 FYIINETKEYALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTILDIKMNDIGNTVKHYRK 182 (353)
T ss_dssp HHHHHHHGGGCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCCHHHHHHHHH
T ss_pred HHHHHHhccccceeeccHHHHHhcCHHHHHHHHHHHHHHHHcCCcEEEEEecCchHHHHHHHHH
Confidence 468999999999999999999999999854443 2234569999999999999999998774
No 51
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=99.30 E-value=5.8e-14 Score=132.36 Aligned_cols=175 Identities=17% Similarity=0.148 Sum_probs=106.3
Q ss_pred ceecccchhhhccCCCccccccchhchhhhHHH-hhhcccCHHHHHHHHHHHhcc-ccceEEEcccCCchhHHHHHHHhh
Q psy4093 79 DSVMHYSRKAFSKNGDDTIVPHFVMAQNVLWSI-IILKLADIGAAVGHQFRLIGE-WAHLVTVHSIAGPGPLQEIQRISD 156 (434)
Q Consensus 79 ~SVMhYg~~aFs~~g~~Ti~~~~~igqr~~~si-~dlKl~DI~nTv~~~~~~~~~-~~d~vTvH~~~G~~ml~~a~~~~~ 156 (434)
-.+|+.|-..+...|.+.|....... ....+ +|+|++|+|++.. +.+.+ ++|++|+|..++.++++.+++..+
T Consensus 32 vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~p~~~~---~~~~~aGad~i~vh~~~~~~~~~~~~~~~~ 106 (218)
T 3jr2_A 32 VDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTDGGAILS---RMAFEAGADWITVSAAAHIATIAACKKVAD 106 (218)
T ss_dssp CSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECSCHHHHH---HHHHHHTCSEEEEETTSCHHHHHHHHHHHH
T ss_pred ceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeecccHHHHH---HHHHhcCCCEEEEecCCCHHHHHHHHHHHH
Confidence 46777775555455655543322110 11123 4999999998844 33444 899999999999889988888877
Q ss_pred hhCCCCceE--EEEEeCCCCCCChHHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccch
Q psy4093 157 ELGEDRGVF--LIAQLSCQGNLIDEKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPSV 234 (434)
Q Consensus 157 ~~~~~~~v~--~v~~lss~~sl~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e~ 234 (434)
+.| ..+. +++.+|+ .....+.+.|+... . +.++... +..|.+|++.+.
T Consensus 107 ~~g--~~~~~d~l~~~T~---~~~~~~~~~g~d~v------------~-----------~~~~~~~--~~~g~~~~~~~l 156 (218)
T 3jr2_A 107 ELN--GEIQIEIYGNWTM---QDAKAWVDLGITQA------------I-----------YHRSRDA--ELAGIGWTTDDL 156 (218)
T ss_dssp HHT--CEEEEECCSSCCH---HHHHHHHHTTCCEE------------E-----------EECCHHH--HHHTCCSCHHHH
T ss_pred HhC--CccceeeeecCCH---HHHHHHHHcCccce------------e-----------eeecccc--ccCCCcCCHHHH
Confidence 665 2222 2333222 11122222222110 0 0000000 123556666544
Q ss_pred h----hcCCCc-eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHH
Q psy4093 235 L----ASNPGL-LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEA 302 (434)
Q Consensus 235 ~----~~~~~~-l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a 302 (434)
. ..++++ +.++|||++. +..+++ ++|||.+||||+|++++||.+++ ++++ .|+.
T Consensus 157 ~~i~~~~~~~~pi~v~GGI~~~-----------~~~~~~-~aGAd~vvvGsaI~~a~dp~~a~-~l~~-~~~~ 215 (218)
T 3jr2_A 157 DKMRQLSALGIELSITGGIVPE-----------DIYLFE-GIKTKTFIAGRALAGAEGQQTAA-ALRE-QIDR 215 (218)
T ss_dssp HHHHHHHHTTCEEEEESSCCGG-----------GGGGGT-TSCEEEEEESGGGSHHHHHHHHH-HHHH-HHHH
T ss_pred HHHHHHhCCCCCEEEECCCCHH-----------HHHHHH-HcCCCEEEEchhhcCCCCHHHHH-HHHH-HHHh
Confidence 3 233455 7889999986 335788 99999999999999999999999 9987 5554
No 52
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=99.27 E-value=1.8e-12 Score=121.90 Aligned_cols=75 Identities=13% Similarity=0.043 Sum_probs=68.2
Q ss_pred CCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcC-CCeeeecCCCCcchhHHHHHhhc
Q psy4093 341 KSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQH-EFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 341 ~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~-gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
++++|+|+|+++.+++++++++++++++++|+|..+|..+|+++++.|++ .+ |+.||+|+||||||||+..++..
T Consensus 3 ~~~~ilalD~~~~~~~~~~~~~~~~~v~~~kv~~~~f~~~G~~~i~~l~~---~~p~~~v~lD~kl~dip~t~~~~~~~ 78 (216)
T 1q6o_A 3 LPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKA---LYPHKIVLADAKIADAGKILSRMCFE 78 (216)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHH---HCTTSEEEEEEEECSCHHHHHHHHHH
T ss_pred cCCeEEEECCCCHHHHHHHHHHhcccCCEEEECHHHHHHhCHHHHHHHHH---hCCCCeEEEEEEecccHHHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999964 23 79999999999999999876543
No 53
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=99.22 E-value=3.6e-12 Score=119.25 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=66.6
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
+||+|+|+++.++++++++++++.++.+|+|..+|..+|++++++|++ .+|++||+|+|+||||||+++.++
T Consensus 1 ~lila~D~~~l~~~~~~~~~~~~~~~~~kv~~~~f~~~G~~~i~~lr~---~~~~~v~~D~kl~DI~~t~~~~v~ 72 (208)
T 2czd_A 1 MIVLALDVYEGERAIKIAKSVKDYISMIKVNWPLILGSGVDIIRRLKE---ETGVEIIADLKLADIPNTNRLIAR 72 (208)
T ss_dssp CEEEECCCCSHHHHHHHHHHHGGGCSEEEEEHHHHHHHCTTHHHHHHH---HHCCEEEEEEEECSCHHHHHHHHH
T ss_pred CeEEEecCCCHHHHHHHHHHhcccccEEEecHHHHHhhCHHHHHHHHH---cCCCEEEEEeeeCchHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999864 238999999999999999988553
No 54
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=99.22 E-value=8.3e-11 Score=108.86 Aligned_cols=170 Identities=16% Similarity=0.144 Sum_probs=99.1
Q ss_pred eecccchhhhccCCCccccccchhchhh-hHHHh-hhcccCHHHHHHHHHHHhccccceEEEcccCCchhHHHHHHHhhh
Q psy4093 80 SVMHYSRKAFSKNGDDTIVPHFVMAQNV-LWSII-ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISDE 157 (434)
Q Consensus 80 SVMhYg~~aFs~~g~~Ti~~~~~igqr~-~~si~-dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~~ 157 (434)
.++|.+-..|...|...|..... .. ...++ |+|++|||+|.... ....++|++|+|+..|.++++.+++..++
T Consensus 27 ~~iev~~~~~~~~g~~~i~~l~~---~~~~~~i~~~l~~~di~~~~~~~--a~~~Gad~v~vh~~~~~~~~~~~~~~~~~ 101 (207)
T 3ajx_A 27 DIIELGTPLIKAEGLSVITAVKK---AHPDKIVFADMKTMDAGELEADI--AFKAGADLVTVLGSADDSTIAGAVKAAQA 101 (207)
T ss_dssp SEEEECHHHHHHHCTHHHHHHHH---HSTTSEEEEEEEECSCHHHHHHH--HHHTTCSEEEEETTSCHHHHHHHHHHHHH
T ss_pred CEEEECcHHHHhhCHHHHHHHHH---hCCCCeEEEEEEecCccHHHHHH--HHhCCCCEEEEeccCChHHHHHHHHHHHH
Confidence 34566665555556555433221 11 22334 89999999994322 23347999999999998899888888766
Q ss_pred hCCCCceEEEEEeCCCCCCCh--HHHHhhcchhhHHHHHhhhccCCCCCCCCchHHHH-HHHHhhcCC-CCceEEeCccc
Q psy4093 158 LGEDRGVFLIAQLSCQGNLID--EKYTQVGFKAITLELKKYLCNNQVLPKCDNDVQET-LKLAQSFPG-LIAGLVCQAPS 233 (434)
Q Consensus 158 ~~~~~~v~~v~~lss~~sl~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~e~v-~~lA~~a~~-gv~GvVcs~~e 233 (434)
.| .. ++++ +.++++..+ +.+.+.|.. .+ +.++..... |.+ ++. ..
T Consensus 102 ~g--~~-~gv~-~~s~~~p~~~~~~~~~~g~d------------------------~v~~~~~~~~~~~g~~-~~~--~~ 150 (207)
T 3ajx_A 102 HN--KG-VVVD-LIGIEDKATRAQEVRALGAK------------------------FVEMHAGLDEQAKPGF-DLN--GL 150 (207)
T ss_dssp HT--CE-EEEE-CTTCSSHHHHHHHHHHTTCS------------------------EEEEECCHHHHTSTTC-CTH--HH
T ss_pred cC--Cc-eEEE-EecCCChHHHHHHHHHhCCC------------------------EEEEEecccccccCCC-chH--HH
Confidence 55 22 2333 333221111 111111100 00 000000000 111 000 11
Q ss_pred hh-hcC-CCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 234 VL-ASN-PGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 234 ~~-~~~-~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.+ ..+ +-.+.++|||+++ |+.+++ ++|||++||||+|++++||.++++++++
T Consensus 151 i~~~~~~~~pi~v~GGI~~~-----------~~~~~~-~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 151 LAAGEKARVPFSVAGGVKVA-----------TIPAVQ-KAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp HHHHHHHTSCEEEESSCCGG-----------GHHHHH-HTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred HHHhhCCCCCEEEECCcCHH-----------HHHHHH-HcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 122 3457899999975 889999 9999999999999999999999999986
No 55
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=98.94 E-value=4.1e-10 Score=105.94 Aligned_cols=74 Identities=12% Similarity=0.011 Sum_probs=66.9
Q ss_pred CCcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhc-CCCeeeecCCCCcchhHHHHHhh
Q psy4093 341 KSNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQ-HEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 341 ~s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k-~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
+++||+|+|+++.++++++++++++++.++|+|..++..+|++++++|++ . .+++||+|+|+||+|+|+..++.
T Consensus 6 ~~~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~~lr~---~~~~~~i~ld~~l~d~p~~~~~~~~ 80 (218)
T 3jr2_A 6 KPMIQIALDQTNLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVSTLRH---NHPNHILVCDMKTTDGGAILSRMAF 80 (218)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHH---HCTTSEEEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEeCCCCHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHHHHHH---hCCCCcEEEEEeecccHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999964 2 27899999999999999766554
No 56
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.93 E-value=5.9e-10 Score=103.10 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=66.8
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcC-CCeeeecCCCCcchhH-HHHHhhcC
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQH-EFLRSRNGWFSPILSS-FSLRFRDD 419 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~-gf~iFlDlKf~DIpnT-V~~a~~~~ 419 (434)
+||+|+|+++.++++++++++++.++++|+|..++..+|++++++|++ .. +++||+|+|+||||+| +..+.+.|
T Consensus 2 ~li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~~---~~~~~~i~~~l~~~di~~~~~~~a~~~G 77 (207)
T 3ajx_A 2 KLQVAIDLLSTEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVKK---AHPDKIVFADMKTMDAGELEADIAFKAG 77 (207)
T ss_dssp EEEEEECCSCHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHH---HSTTSEEEEEEEECSCHHHHHHHHHHTT
T ss_pred eEEEEeCCCCHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHHH---hCCCCeEEEEEEecCccHHHHHHHHhCC
Confidence 699999999999999999999999999999999999999999999864 34 8999999999999999 66666655
No 57
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.79 E-value=5.9e-09 Score=99.40 Aligned_cols=53 Identities=17% Similarity=0.220 Sum_probs=46.3
Q ss_pred CceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHH
Q psy4093 240 GLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQ 305 (434)
Q Consensus 240 ~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~ 305 (434)
-.+.|.+||++. |+.+++ ++|||++||||+|++++||.++++++++ .++.+.+
T Consensus 170 ~~I~VdGGI~~~-----------t~~~~~-~aGAd~~VvGsaIf~a~dp~~~~~~l~~-~~~~~~~ 222 (228)
T 3ovp_A 170 LDIEVDGGVGPD-----------TVHKCA-EAGANMIVSGSAIMRSEDPRSVINLLRN-VCSEAAQ 222 (228)
T ss_dssp CEEEEESSCSTT-----------THHHHH-HHTCCEEEESHHHHTCSCHHHHHHHHHH-HHHHHHH
T ss_pred CCEEEeCCcCHH-----------HHHHHH-HcCCCEEEEeHHHhCCCCHHHHHHHHHH-HHHHHHh
Confidence 346789999975 899999 9999999999999999999999999997 5666654
No 58
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.78 E-value=7e-09 Score=96.59 Aligned_cols=140 Identities=13% Similarity=0.056 Sum_probs=85.3
Q ss_pred hhcccCHHHHHHHHHHHhccccceEEEcccCCchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHHH
Q psy4093 113 ILKLADIGAAVGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITLE 192 (434)
Q Consensus 113 dlKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~~ 192 (434)
++|++|+++.+..+ ...++|++++|...+ +++..+.+..++.| . .++++..++ + ..+.+... ..
T Consensus 67 ~l~v~d~~~~i~~~---~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~-~i~~~~~~~-t--~~e~~~~~--~~---- 130 (220)
T 2fli_A 67 HLMVVDPERYVEAF---AQAGADIMTIHTEST-RHIHGALQKIKAAG--M-KAGVVINPG-T--PATALEPL--LD---- 130 (220)
T ss_dssp EEESSSGGGGHHHH---HHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--S-EEEEEECTT-S--CGGGGGGG--TT----
T ss_pred EEeecCHHHHHHHH---HHcCCCEEEEccCcc-ccHHHHHHHHHHcC--C-cEEEEEcCC-C--CHHHHHHH--Hh----
Confidence 78999998866432 333799999999877 66666666665444 2 345554322 1 11112110 00
Q ss_pred HHhhhccCCCCCCCCchHHHHHHHHhhcCC-CCceEEeCccc---hh----h---cCCCc-eEecCcccccCCCCCCCCc
Q psy4093 193 LKKYLCNNQVLPKCDNDVQETLKLAQSFPG-LIAGLVCQAPS---VL----A---SNPGL-LQLTPGIHLNQTGDNKGQQ 260 (434)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~-gv~GvVcs~~e---~~----~---~~~~~-l~vtPGIr~~~~~~~~~dQ 260 (434)
.. +.++- .+.+ |.+|..+++.. .. . .+.++ +.+++||++.
T Consensus 131 ------------~~----d~vl~---~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~--------- 182 (220)
T 2fli_A 131 ------------LV----DQVLI---MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNK--------- 182 (220)
T ss_dssp ------------TC----SEEEE---ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTT---------
T ss_pred ------------hC----CEEEE---EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHH---------
Confidence 00 01110 0111 34555444321 11 1 11233 4789999974
Q ss_pred cCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHH
Q psy4093 261 YNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMW 300 (434)
Q Consensus 261 ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~ 300 (434)
++.+++ ++|||.+||||+|++++||.++++++++ .|
T Consensus 183 --~~~~~~-~~Gad~vvvGsai~~~~d~~~a~~~~~~-~~ 218 (220)
T 2fli_A 183 --TIRACY-EAGANVFVAGSYLFKASDLVSQVQTLRT-AL 218 (220)
T ss_dssp --THHHHH-HHTCCEEEESHHHHTSSCHHHHHHHHHH-HH
T ss_pred --HHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-Hh
Confidence 788999 8999999999999999999999999986 44
No 59
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.76 E-value=7.4e-08 Score=89.15 Aligned_cols=133 Identities=23% Similarity=0.311 Sum_probs=86.5
Q ss_pred hhcccCHHHH-HHHHHHHhccccceEEEcccCCchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHhhcchhhHH
Q psy4093 113 ILKLADIGAA-VGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQVGFKAITL 191 (434)
Q Consensus 113 dlKl~DI~nT-v~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~~g~~~~~~ 191 (434)
|+|++|.+++ +.. ....++|++++|...+.++++.+.+.+++.| .. ++..+.++++. .
T Consensus 59 ~~~~~~~~~~~~~~---~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~--~~v~~~~~~t~--~------------ 117 (211)
T 3f4w_A 59 DAKIMDGGHFESQL---LFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQ--VVVDMICVDDL--P------------ 117 (211)
T ss_dssp EEEECSCHHHHHHH---HHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CE--EEEECTTCSSH--H------------
T ss_pred EEEeccchHHHHHH---HHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--Ce--EEEEecCCCCH--H------------
Confidence 8999999987 332 3344899999999988788888888877665 22 33344443211 0
Q ss_pred HHHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeC-----------ccc-hh---h-cCCCceEecCcccccCCCC
Q psy4093 192 ELKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQ-----------APS-VL---A-SNPGLLQLTPGIHLNQTGD 255 (434)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs-----------~~e-~~---~-~~~~~l~vtPGIr~~~~~~ 255 (434)
+. ++.+..+ |++.+-+. ..+ .+ . ++.-.+.+.+||++.
T Consensus 118 -------------------~~-~~~~~~~--g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~---- 171 (211)
T 3f4w_A 118 -------------------AR-VRLLEEA--GADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQ---- 171 (211)
T ss_dssp -------------------HH-HHHHHHH--TCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTT----
T ss_pred -------------------HH-HHHHHHc--CCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHH----
Confidence 11 1122222 23432211 111 11 2 223446788999853
Q ss_pred CCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 256 NKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 256 ~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
++.+++ ++|||.+||||+|++++||.++++++++ .++
T Consensus 172 -------~~~~~~-~~Gad~vvvGsai~~~~d~~~~~~~l~~-~~~ 208 (211)
T 3f4w_A 172 -------TVKDYA-LLGPDVVIVGSAITHAADPAGEARKISQ-VLL 208 (211)
T ss_dssp -------THHHHH-TTCCSEEEECHHHHTCSSHHHHHHHHHH-HHH
T ss_pred -------HHHHHH-HcCCCEEEECHHHcCCCCHHHHHHHHHH-HHh
Confidence 778999 9999999999999999999999999987 443
No 60
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.44 E-value=1.2e-07 Score=87.69 Aligned_cols=76 Identities=9% Similarity=-0.008 Sum_probs=67.3
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhH-HHHHhhcCc
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSS-FSLRFRDDK 420 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnT-V~~a~~~~~ 420 (434)
+||+|+|+++.++++++++++++++.++++|..++..+|+++++++++. --+++|+.|+|++|++++ +..+...|=
T Consensus 2 ~li~a~D~~~~~~~~~~~~~~~~~~diie~G~p~~~~~g~~~i~~ir~~--~~~~~i~~~~~~~~~~~~~~~~~~~~Ga 78 (211)
T 3f4w_A 2 KLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEK--YPHKEVLADAKIMDGGHFESQLLFDAGA 78 (211)
T ss_dssp EEEEEECSCCHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHH--CTTSEEEEEEEECSCHHHHHHHHHHTTC
T ss_pred cEEEEeCCCCHHHHHHHHHHhhcCccEEEeCcHHHHhccHHHHHHHHHh--CCCCEEEEEEEeccchHHHHHHHHhcCC
Confidence 5999999999999999999999999999999988778899999998642 137899999999999999 888887774
No 61
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.29 E-value=7.3e-07 Score=83.82 Aligned_cols=44 Identities=30% Similarity=0.393 Sum_probs=39.9
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+.+++||++. ++.+++ ++|||.+|||++|++++||.++++++++
T Consensus 182 i~v~GGI~~~-----------n~~~~~-~aGad~vvvgSaI~~a~dp~~a~~~l~~ 225 (230)
T 1rpx_A 182 IEVDGGVGPK-----------NAYKVI-EAGANALVAGSAVFGAPDYAEAIKGIKT 225 (230)
T ss_dssp EEEESSCCTT-----------THHHHH-HHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred EEEECCCCHH-----------HHHHHH-HcCCCEEEEChhhhCCCCHHHHHHHHHH
Confidence 4789999975 788999 8999999999999999999999999875
No 62
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.14 E-value=8.9e-06 Score=78.43 Aligned_cols=48 Identities=13% Similarity=0.293 Sum_probs=42.4
Q ss_pred CCCc-eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 238 NPGL-LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 238 ~~~~-l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+.++ +.|.+||+++ |+.+++ ++|||.+|+||+|++++||.++++++++
T Consensus 193 ~~~~~I~VDGGI~~~-----------ti~~~~-~aGAD~~V~GSaIf~a~dp~~~i~~l~~ 241 (246)
T 3inp_A 193 DRDILLEIDGGVNPY-----------NIAEIA-VCGVNAFVAGSAIFNSDSYKQTIDKMRD 241 (246)
T ss_dssp TSCCEEEEESSCCTT-----------THHHHH-TTTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CCCeeEEEECCcCHH-----------HHHHHH-HcCCCEEEEehHHhCCCCHHHHHHHHHH
Confidence 4455 4589999975 889999 9999999999999999999999999887
No 63
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.92 E-value=8e-06 Score=77.76 Aligned_cols=47 Identities=21% Similarity=0.292 Sum_probs=41.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
+.|.+||.++ |..+++ ++|||.+|+||+|++++||.++++++++ .++
T Consensus 176 I~VdGGI~~~-----------ti~~~~-~aGAd~~V~GsaIf~~~d~~~~i~~l~~-~~~ 222 (227)
T 1tqx_A 176 IQVDGGLNIE-----------TTEISA-SHGANIIVAGTSIFNAEDPKYVIDTMRV-SVQ 222 (227)
T ss_dssp EEEESSCCHH-----------HHHHHH-HHTCCEEEESHHHHTCSSHHHHHHHHHH-HHH
T ss_pred EEEECCCCHH-----------HHHHHH-HcCCCEEEEeHHHhCCCCHHHHHHHHHH-HHH
Confidence 4668999975 778999 9999999999999999999999999986 443
No 64
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.72 E-value=0.00016 Score=68.08 Aligned_cols=47 Identities=21% Similarity=0.235 Sum_probs=41.1
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
+.+..||.++ +..+++ ++|+|.+|||+.|++++||.++++++++ .|+
T Consensus 176 i~v~GGI~~~-----------ni~~~~-~aGaD~vvvGsai~~~~d~~~~~~~l~~-~~~ 222 (228)
T 1h1y_A 176 IEVDGGLGPS-----------TIDVAA-SAGANCIVAGSSIFGAAEPGEVISALRK-SVE 222 (228)
T ss_dssp EEEESSCSTT-----------THHHHH-HHTCCEEEESHHHHTSSCHHHHHHHHHH-HHH
T ss_pred EEEECCcCHH-----------HHHHHH-HcCCCEEEECHHHHCCCCHHHHHHHHHH-HHH
Confidence 5678999975 678888 8999999999999999999999999986 554
No 65
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.45 E-value=0.00084 Score=63.87 Aligned_cols=44 Identities=20% Similarity=0.262 Sum_probs=39.0
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeC-CcccCCCC-HHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVG-RGITQAPD-PVEAARRYKE 297 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVG-R~It~A~D-P~~aa~~i~~ 297 (434)
+-|.-||.+. |..+++ ++|||.+|+| ++|++++| |.++++++++
T Consensus 170 I~VdGGI~~~-----------~~~~~~-~aGAd~~V~G~saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 170 IEVDGSCNQA-----------TYEKLM-AAGADVFIVGTSGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp EEEESCCSTT-----------THHHHH-HHTCCEEEECTTTTGGGCSSHHHHHHHHHH
T ss_pred EEEECCcCHH-----------HHHHHH-HcCCCEEEEccHHHhCCCCcHHHHHHHHHH
Confidence 4567888865 778999 9999999999 99999999 9999999986
No 66
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.00 E-value=0.002 Score=60.84 Aligned_cols=44 Identities=25% Similarity=0.378 Sum_probs=37.8
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+.+--||... |..+++ ++|||.+|||+.|++++||.++++++++
T Consensus 176 I~v~GGI~~~-----------~~~~~~-~aGad~vvvGSai~~a~d~~~~~~~l~~ 219 (230)
T 1tqj_A 176 IEVDGGLKPN-----------NTWQVL-EAGANAIVAGSAVFNAPNYAEAIAGVRN 219 (230)
T ss_dssp EEEESSCCTT-----------TTHHHH-HHTCCEEEESHHHHTSSCHHHHHHHHHT
T ss_pred EEEECCcCHH-----------HHHHHH-HcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 4556788864 568888 8999999999999999999999999875
No 67
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.91 E-value=0.002 Score=61.53 Aligned_cols=43 Identities=12% Similarity=0.127 Sum_probs=37.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHH--cCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITL--RGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~--~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+.+.-||.+. |..+++ + +|||.+|+|++|+++ ||.++++++++
T Consensus 190 I~vdGGI~~~-----------~~~~~~-~~~aGad~~VvGSaIf~~-d~~~~~~~l~~ 234 (237)
T 3cu2_A 190 INIDGSMTLE-----------LAKYFK-QGTHQIDWLVSGSALFSG-ELKTNLKVWKS 234 (237)
T ss_dssp EEEESSCCHH-----------HHHHHH-HSSSCCCCEEECGGGGSS-CHHHHHHHHHH
T ss_pred EEEECCcCHH-----------HHHHHH-HhCCCCcEEEEeeHHhCC-CHHHHHHHHHH
Confidence 4567888865 667888 9 999999999999999 99999999986
No 68
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.80 E-value=0.0072 Score=59.66 Aligned_cols=48 Identities=19% Similarity=0.136 Sum_probs=35.5
Q ss_pred cCCCceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC----CCHHHHH
Q psy4093 237 SNPGLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA----PDPVEAA 292 (434)
Q Consensus 237 ~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A----~DP~~aa 292 (434)
++-.++.+.-|+.+. +=..+..+|+ ++|++-++|||.|+++ +||.+++
T Consensus 220 ~~~P~Vv~aGG~~~~-------~~~~~~~~a~-~aGa~Gv~vGRaI~q~~~~~~dp~~~~ 271 (304)
T 1to3_A 220 INMPWVILSSGVDEK-------LFPRAVRVAM-EAGASGFLAGRAVWSSVIGLPDTELML 271 (304)
T ss_dssp CCSCEEECCTTSCTT-------THHHHHHHHH-HTTCCEEEESHHHHGGGTTCSCHHHHH
T ss_pred CCCCeEEEecCCCHH-------HHHHHHHHHH-HcCCeEEEEehHHhCccccCCCHHHHH
Confidence 333346667777321 1123468889 8999999999999999 9999998
No 69
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=96.72 E-value=0.014 Score=57.50 Aligned_cols=34 Identities=26% Similarity=0.218 Sum_probs=30.8
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
...+|+ ++||+.++|||.|++++||.++++.+++
T Consensus 242 ~v~~ai-~aGA~Gv~vGRnI~q~~dp~~~~~al~~ 275 (295)
T 3glc_A 242 MCWQAI-DQGASGVDMGRNIFQSDHPVAMMKAVQA 275 (295)
T ss_dssp HHHHHH-HTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred HHHHHH-HhCCeEEEeHHHHhcCcCHHHHHHHHHH
Confidence 457889 8999999999999999999999998875
No 70
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=96.28 E-value=0.0035 Score=57.74 Aligned_cols=75 Identities=7% Similarity=-0.032 Sum_probs=61.0
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeE--ce-eeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhc
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKT--HS-DAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRD 418 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKv--g~-dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~ 418 (434)
.++|+|+|+.+..+..+.+.+.|.....+++ |. ..+..+|++.+++|++ ..++.++.|++.+|+++.+..+...
T Consensus 7 ~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~---~~~~~~~v~l~v~d~~~~i~~~~~~ 83 (220)
T 2fli_A 7 APSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRK---HSKLVFDCHLMVVDPERYVEAFAQA 83 (220)
T ss_dssp EEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHT---TCCSEEEEEEESSSGGGGHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHH---hCCCCEEEEEeecCHHHHHHHHHHc
Confidence 3578899999999999999999886655665 55 4566778999998863 3388999999999999999888776
Q ss_pred C
Q psy4093 419 D 419 (434)
Q Consensus 419 ~ 419 (434)
|
T Consensus 84 g 84 (220)
T 2fli_A 84 G 84 (220)
T ss_dssp T
T ss_pred C
Confidence 5
No 71
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.84 E-value=0.063 Score=48.78 Aligned_cols=46 Identities=20% Similarity=0.210 Sum_probs=37.7
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCC---HHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPD---PVEAARRYKEVMWE 301 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~D---P~~aa~~i~~~~~~ 301 (434)
++.+-||.+. +..+++ ++|||.++||+.|+. +| |.++++++++ .|+
T Consensus 153 via~GGI~~~-----------~~~~~~-~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~-~~~ 201 (205)
T 1wa3_A 153 FVPTGGVNLD-----------NVCEWF-KAGVLAVGVGSALVK-GTPDEVREKAKAFVE-KIR 201 (205)
T ss_dssp EEEBSSCCTT-----------THHHHH-HHTCSCEEECHHHHC-SCHHHHHHHHHHHHH-HHH
T ss_pred EEEcCCCCHH-----------HHHHHH-HCCCCEEEECccccC-CCHHHHHHHHHHHHH-HHH
Confidence 4556788753 668999 999999999999999 99 9988888886 444
No 72
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=95.71 E-value=0.039 Score=53.15 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=50.8
Q ss_pred HHHHhhcCCCCceEEeCcc---ch-h----hcCCC-ceEecCcccccCCCCCCCCc-cCCHHHHHHHcCCCEEEeCCccc
Q psy4093 214 LKLAQSFPGLIAGLVCQAP---SV-L----ASNPG-LLQLTPGIHLNQTGDNKGQQ-YNGPTDVITLRGADLGVVGRGIT 283 (434)
Q Consensus 214 ~~lA~~a~~gv~GvVcs~~---e~-~----~~~~~-~l~vtPGIr~~~~~~~~~dQ-~~TP~~Ai~~~GAD~IVVGR~It 283 (434)
.++|..+ |.|.|-.+.. |. + .+ +. -+....||+.. .. ++ .....+++ ++||+.+.+||.|+
T Consensus 165 ~~~a~~~--GAD~vkt~~~~~~e~~~~~~~~~-~~~pV~asGGi~~~----~~-~~~l~~i~~~~-~aGA~GvsvgraI~ 235 (263)
T 1w8s_A 165 ARIALEL--GADAMKIKYTGDPKTFSWAVKVA-GKVPVLMSGGPKTK----TE-EDFLKQVEGVL-EAGALGIAVGRNVW 235 (263)
T ss_dssp HHHHHHH--TCSEEEEECCSSHHHHHHHHHHT-TTSCEEEECCSCCS----SH-HHHHHHHHHHH-HTTCCEEEESHHHH
T ss_pred HHHHHHc--CCCEEEEcCCCCHHHHHHHHHhC-CCCeEEEEeCCCCC----CH-HHHHHHHHHHH-HcCCeEEEEehhhc
Confidence 4445444 6887766543 11 1 23 33 35667888742 00 11 23567778 89999999999999
Q ss_pred CCCCHHHHHHHHHH
Q psy4093 284 QAPDPVEAARRYKE 297 (434)
Q Consensus 284 ~A~DP~~aa~~i~~ 297 (434)
+++||.++++++++
T Consensus 236 ~~~dp~~~~~~l~~ 249 (263)
T 1w8s_A 236 QRRDALKFARALAE 249 (263)
T ss_dssp TSTTHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHH
Confidence 99999999999986
No 73
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.39 E-value=0.1 Score=49.56 Aligned_cols=81 Identities=19% Similarity=0.146 Sum_probs=52.9
Q ss_pred HHHHHHhhcCCCCceEEeCcc---ch-h---hcCCCceEecCcccccCCCCCCCCc-cCCHHHHHHHcCCCEEEeCCccc
Q psy4093 212 ETLKLAQSFPGLIAGLVCQAP---SV-L---ASNPGLLQLTPGIHLNQTGDNKGQQ-YNGPTDVITLRGADLGVVGRGIT 283 (434)
Q Consensus 212 ~v~~lA~~a~~gv~GvVcs~~---e~-~---~~~~~~l~vtPGIr~~~~~~~~~dQ-~~TP~~Ai~~~GAD~IVVGR~It 283 (434)
.+.+.|..+ |+|.+..+.. +. . ...+-.++...||+.. + .++ .....+++ +.|+|.+.|||.|+
T Consensus 170 ~~a~~a~~~--Gad~i~~~~~~~~~~l~~i~~~~~ipvva~GGi~~~----~-~~~~~~~~~~~~-~~Ga~gv~vg~~i~ 241 (273)
T 2qjg_A 170 HAARLGAEL--GADIVKTSYTGDIDSFRDVVKGCPAPVVVAGGPKTN----T-DEEFLQMIKDAM-EAGAAGVAVGRNIF 241 (273)
T ss_dssp HHHHHHHHT--TCSEEEECCCSSHHHHHHHHHHCSSCEEEECCSCCS----S-HHHHHHHHHHHH-HHTCSEEECCHHHH
T ss_pred HHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCCEEEEeCCCCC----C-HHHHHHHHHHHH-HcCCcEEEeeHHhh
Confidence 344555554 6887766631 11 1 1223345668888853 0 011 12267778 89999999999999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy4093 284 QAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 284 ~A~DP~~aa~~i~~~~~~ 301 (434)
+++||.++++++++ .|.
T Consensus 242 ~~~~~~~~~~~l~~-~~~ 258 (273)
T 2qjg_A 242 QHDDVVGITRAVCK-IVH 258 (273)
T ss_dssp TSSSHHHHHHHHHH-HHH
T ss_pred CCCCHHHHHHHHHH-HHh
Confidence 99999999999886 553
No 74
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=94.36 E-value=0.028 Score=54.92 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=32.2
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
.+++ +.|+|-+.|||+|+.|+||.+.+++|++ .++.|
T Consensus 216 ~~~l-e~GaDGVmVGrAI~~s~DP~~~Akafv~-Av~~~ 252 (291)
T 3o07_A 216 ALLM-QLGCDGVFVGSGIFKSSNPVRLATAVVE-ATTHF 252 (291)
T ss_dssp HHHH-HTTCSCEEECGGGGGSSCHHHHHHHHHH-HHHTT
T ss_pred HHHH-HhCCCEEEEchHHhCCCCHHHHHHHHHH-HHHhc
Confidence 4456 7899999999999999999999999997 66666
No 75
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.15 E-value=0.061 Score=49.25 Aligned_cols=51 Identities=14% Similarity=0.150 Sum_probs=41.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC----CCHHHHHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA----PDPVEAARRYKEVMWEAYEQ 305 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A----~DP~~aa~~i~~~~~~a~~~ 305 (434)
++..-||.+. +..+++ ++|+|.++||+.|+.+ +||.++++++++ .|++..|
T Consensus 151 via~GGI~~~-----------~i~~~~-~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~-~~~~~~~ 205 (212)
T 2v82_A 151 VFAVGGVTPE-----------NLAQWI-DAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK-AYREAVQ 205 (212)
T ss_dssp EEEESSCCTT-----------THHHHH-HHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH-HHHHHHH
T ss_pred EEEeCCCCHH-----------HHHHHH-HcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH-HHHHHHH
Confidence 4556777743 568888 8999999999999998 799999999987 6766554
No 76
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.46 E-value=0.081 Score=48.62 Aligned_cols=49 Identities=35% Similarity=0.469 Sum_probs=39.6
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
+++.-||.+. +..+++ +.|+|.++||+.|..++||.++++++++ .++.+
T Consensus 175 via~GGI~~~-----------nv~~~~-~~Ga~gv~vgs~i~~~~d~~~~~~~~~~-~~~~~ 223 (227)
T 2tps_A 175 IVGIGGITID-----------NAAPVI-QAGADGVSMISAISQAEDPESAARKFRE-EIQTY 223 (227)
T ss_dssp EEEESSCCTT-----------TSHHHH-HTTCSEEEESHHHHTSSCHHHHHHHHHH-HHHHH
T ss_pred EEEEcCCCHH-----------HHHHHH-HcCCCEEEEhHHhhcCCCHHHHHHHHHH-HHHhc
Confidence 4667788753 457888 8999999999999999999999999986 55443
No 77
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=93.07 E-value=0.068 Score=51.02 Aligned_cols=37 Identities=35% Similarity=0.322 Sum_probs=33.2
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
+..+++ ++|||.+.||+.|+.++||.++++++++ .|+
T Consensus 204 ni~~~~-~aGa~gvav~sai~~a~dp~~a~~~l~~-~~~ 240 (243)
T 3o63_A 204 RLPAVL-DAGARRIVVVRAITSADDPRAAAEQLRS-ALT 240 (243)
T ss_dssp THHHHH-HTTCCCEEESHHHHTCSSHHHHHHHHHH-HHH
T ss_pred HHHHHH-HcCCCEEEEeHHHhCCCCHHHHHHHHHH-HHH
Confidence 567888 9999999999999999999999999987 553
No 78
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.99 E-value=0.7 Score=44.66 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=28.5
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.++. +.|+|-++||+.|++++||.++++++.+
T Consensus 229 ~~l~-~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 229 LAYA-GAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp HHHH-HTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HHHH-HcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 3456 7899999999999999999999998876
No 79
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=92.98 E-value=0.11 Score=47.07 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=38.9
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWE 301 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~ 301 (434)
+++.-||.+. +..+++ +.|+|.++||+.|+.++||.+.++++++ .++
T Consensus 165 via~GGI~~~-----------nv~~~~-~~Ga~gv~vgs~i~~~~d~~~~~~~~~~-~~~ 211 (215)
T 1xi3_A 165 VVAIGGINKD-----------NAREVL-KTGVDGIAVISAVMGAEDVRKATEELRK-IVE 211 (215)
T ss_dssp EEEESSCCTT-----------THHHHH-TTTCSEEEESHHHHTSSSHHHHHHHHHH-HHH
T ss_pred EEEECCcCHH-----------HHHHHH-HcCCCEEEEhHHHhCCCCHHHHHHHHHH-HHh
Confidence 4667788853 567888 8999999999999999999999998886 444
No 80
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.82 E-value=0.076 Score=51.41 Aligned_cols=34 Identities=29% Similarity=0.341 Sum_probs=30.0
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+..+++ ++|||.++||+.|++++||.++++++++
T Consensus 223 ~i~~~~-~aGadgvvvGsai~~~~dp~~~~~~l~~ 256 (297)
T 2zbt_A 223 DAALMM-HLGMDGVFVGSGIFKSGDPRKRARAIVR 256 (297)
T ss_dssp HHHHHH-HTTCSEEEECGGGGGSSCHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEchHHhCCCCHHHHHHHHHH
Confidence 446667 8999999999999999999999988876
No 81
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=92.05 E-value=0.12 Score=49.57 Aligned_cols=37 Identities=32% Similarity=0.334 Sum_probs=31.6
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEA 302 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a 302 (434)
..+++ +.|||.++||+.|.++.||.++++++++ .+++
T Consensus 193 a~~~~-~~GAdgViVGSAi~~a~dp~~~~~~l~~-~v~~ 229 (264)
T 1xm3_A 193 AAYAM-ELGADGVLLNTAVSGADDPVKMARAMKL-AVEA 229 (264)
T ss_dssp HHHHH-HTTCSEEEESHHHHTSSSHHHHHHHHHH-HHHH
T ss_pred HHHHH-HcCCCEEEEcHHHhCCCCHHHHHHHHHH-HHHH
Confidence 35566 8999999999999999999999999997 4544
No 82
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=92.02 E-value=0.16 Score=46.83 Aligned_cols=44 Identities=36% Similarity=0.443 Sum_probs=37.7
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
++..-||.+. +..+++ +.|||.++||++|..++||.++++++++
T Consensus 167 via~GGI~~~-----------nv~~~~-~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 210 (221)
T 1yad_A 167 VIAIGGMTPD-----------RLRDVK-QAGADGIAVMSGIFSSAEPLEAARRYSR 210 (221)
T ss_dssp EEEESSCCGG-----------GHHHHH-HTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred EEEECCCCHH-----------HHHHHH-HcCCCEEEEhHHhhCCCCHHHHHHHHHH
Confidence 4667788654 568889 8999999999999999999999998886
No 83
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.60 E-value=0.6 Score=45.14 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=33.7
Q ss_pred CCHHHH---HHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 262 NGPTDV---ITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 262 ~TP~~A---i~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
.||++| + +.|||-++||-.|+.|+||...++++++ ..+|-
T Consensus 197 ~TPsDAa~Am-eLGAdgVlVgSAI~~a~dP~~ma~af~~-Av~aG 239 (265)
T 1wv2_A 197 GTASDAAIAM-ELGCEAVLMNTAIAHAKDPVMMAEAMKH-AIVAG 239 (265)
T ss_dssp CSHHHHHHHH-HHTCSEEEESHHHHTSSSHHHHHHHHHH-HHHHH
T ss_pred CCHHHHHHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-HHHHH
Confidence 577765 6 7899999999999999999999999987 44443
No 84
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=91.02 E-value=1 Score=43.17 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=72.7
Q ss_pred HHhccccceEEEcccC-CchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHH---hh-cchhhHHHHHhhhccCCC
Q psy4093 128 RLIGEWAHLVTVHSIA-GPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYT---QV-GFKAITLELKKYLCNNQV 202 (434)
Q Consensus 128 ~~~~~~~d~vTvH~~~-G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~---~~-g~~~~~~~~~~~~~~~~~ 202 (434)
+....|+|++.+-+.. ..+.++.+.+.+++.| +.++++..+ .++.. ++ |... +|+|++.
T Consensus 118 ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG----l~~lvEv~~-----~eE~~~A~~l~g~~i-------IGinnr~ 181 (251)
T 1i4n_A 118 LASSVGADAILIIARILTAEQIKEIYEAAEELG----MDSLVEVHS-----REDLEKVFSVIRPKI-------IGINTRD 181 (251)
T ss_dssp HHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT----CEEEEEECS-----HHHHHHHHTTCCCSE-------EEEECBC
T ss_pred HHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC----CeEEEEeCC-----HHHHHHHHhcCCCCE-------EEEeCcc
Confidence 3344479998877665 6677888888877654 556777665 22221 22 2221 3444433
Q ss_pred CCCCCchHHHHHHHHhhcCCCCceEEeCccchhhcCCCceEe-cCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCc
Q psy4093 203 LPKCDNDVQETLKLAQSFPGLIAGLVCQAPSVLASNPGLLQL-TPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRG 281 (434)
Q Consensus 203 ~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e~~~~~~~~l~v-tPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~ 281 (434)
......+.+...+++.... ++.+.| --||.-. .+...+. +. +|-++||.+
T Consensus 182 l~t~~~d~~~~~~l~~~ip-----------------~~~~vIaEsGI~t~----------edv~~~~-~~-a~avLVG~a 232 (251)
T 1i4n_A 182 LDTFEIKKNVLWELLPLVP-----------------DDTVVVAESGIKDP----------RELKDLR-GK-VNAVLVGTS 232 (251)
T ss_dssp TTTCCBCTTHHHHHGGGSC-----------------TTSEEEEESCCCCG----------GGHHHHT-TT-CSEEEECHH
T ss_pred cccCCCCHHHHHHHHHhCC-----------------CCCEEEEeCCCCCH----------HHHHHHH-Hh-CCEEEEcHH
Confidence 3223333334444444321 222222 2455411 1345566 77 999999999
Q ss_pred ccCCCCHHHHHHHHHH
Q psy4093 282 ITQAPDPVEAARRYKE 297 (434)
Q Consensus 282 It~A~DP~~aa~~i~~ 297 (434)
|+.++||.++.+++..
T Consensus 233 imr~~d~~~~~~~l~~ 248 (251)
T 1i4n_A 233 IMKAENPRRFLEEMRA 248 (251)
T ss_dssp HHHCSSHHHHHHHHHH
T ss_pred HcCCcCHHHHHHHHHh
Confidence 9999999999998875
No 85
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=90.69 E-value=0.11 Score=55.13 Aligned_cols=129 Identities=12% Similarity=0.057 Sum_probs=73.2
Q ss_pred CHHHHHHH--------cCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChhhhhhhccchhhHHHH
Q psy4093 263 GPTDVITL--------RGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFETRKADVKCRISSTLL 334 (434)
Q Consensus 263 TP~~Ai~~--------~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~ 334 (434)
+..+++ + .|+|.+.|++.|++++||.++++++++ .|+..........|+...... ....+. .++
T Consensus 186 ni~~v~-~~~~~~g~~~GadgvAVvsaI~~a~dp~~a~~~l~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~ 257 (540)
T 3nl6_A 186 NIERVL-YQCVSSNGKRSLDGICVVSDIIASLDAAKSTKILRG-LIDKTDYKFVNIGLSTKNSLT-----TTDEIQ-SII 257 (540)
T ss_dssp THHHHH-HHCBCTTSSCBCSCEEESHHHHTCTTHHHHHHHHHH-HHHCCBCCCSSSBCCCCCSCC-----CHHHHH-HHH
T ss_pred HHHHHH-HhhcccccccCceEEEEeHHHhcCCCHHHHHHHHHH-HHHhCCCcccccccccccchh-----HHHHHH-HHH
Confidence 456777 6 799999999999999999999999886 554311000000011100000 001112 122
Q ss_pred HHhhhcCCcEEEE---------------------ecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHh
Q psy4093 335 DIMVKKKSNLCVA---------------------LDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAK 393 (434)
Q Consensus 335 ~~m~~k~s~LivA---------------------lD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~ 393 (434)
+-+.++++ |+-- +=....+|+.+|++.- -...++++|+ ..+ .+.+....+.++
T Consensus 258 ~~vr~~~P-Lvh~iTN~V~~n~~AN~~La~GasPiM~~~~~E~~e~~~~~-~~alvin~G~--l~~--~~~~~~a~~~a~ 331 (540)
T 3nl6_A 258 SNTLKARP-LVQHITNKVHQNFGANVTLALGSSPIMSEIQSEVNDLAAIP-HATLLLNTGS--VAP--PEMLKAAIRAYN 331 (540)
T ss_dssp HHHHHHCC-EEEEECCHHHHHHHHHHHHHTTSEEECCCCHHHHHHHTTST-TCEEEEESSC--SCC--HHHHHHHHHHHH
T ss_pred HHHHhcCC-eEEEccccchHHHHHHHHHHcCCChhhcCCHHHHHHHHhcc-CCeEEEeCCC--CCH--HHHHHHHHHHHH
Confidence 22333322 2111 1124577888777731 3566788886 344 666666666677
Q ss_pred cCCCeeeecCCC
Q psy4093 394 QHEFLRSRNGWF 405 (434)
Q Consensus 394 k~gf~iFlDlKf 405 (434)
+++.+|.+|=--
T Consensus 332 ~~~~PvVlDPVg 343 (540)
T 3nl6_A 332 DVKRPIVFDPVG 343 (540)
T ss_dssp TTTCCEEEECTT
T ss_pred HcCCCEEEChHH
Confidence 889999999643
No 86
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=88.49 E-value=1.8 Score=41.35 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=16.5
Q ss_pred HHHHHHcCCCEEEeCCcccCC
Q psy4093 265 TDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A 285 (434)
.+++ .+|||.+|||..|++.
T Consensus 221 ~~~~-~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 221 SAAV-RAGAAGAISGSAIVKI 240 (268)
T ss_dssp HHHH-HTTCSEEEECHHHHHH
T ss_pred HHHH-HcCCCEEEEChHHhhh
Confidence 3445 6899999999999875
No 87
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=87.59 E-value=0.55 Score=45.53 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=31.5
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
..|+ +.|||-++||-+|+.|+||...++++++ ..+|-
T Consensus 194 a~Am-eLGAdgVlVgSAI~~a~dP~~ma~af~~-Av~ag 230 (268)
T 2htm_A 194 AEVM-ELGLDAVLVNTAIAEAQDPPAMAEAFRL-AVEAG 230 (268)
T ss_dssp HHHH-HTTCCEEEESHHHHTSSSHHHHHHHHHH-HHHHH
T ss_pred HHHH-HcCCCEEEEChHHhCCCCHHHHHHHHHH-HHHHH
Confidence 4457 8999999999999999999999999998 44443
No 88
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=87.21 E-value=2.2 Score=41.23 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=29.1
Q ss_pred CHHHH---HHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDV---ITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~A---i~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
||+++ . +.|+|-++||.+|+.++||.++.+++..
T Consensus 231 t~edv~~l~-~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 231 THEDCLRLE-KSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp SHHHHHHHH-TTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred CHHHHHHHH-HcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 55554 5 6899999999999999999999988764
No 89
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=86.43 E-value=0.43 Score=46.42 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=32.1
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYE 304 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~ 304 (434)
..+++ +.|||.++|||.|+.++||.++++++++ .+..|.
T Consensus 224 ~~~~~-~~GadgV~vGsai~~~~~p~~~~~~l~~-~~~~~~ 262 (305)
T 2nv1_A 224 AALMM-QLGADGVFVGSGIFKSDNPAKFAKAIVE-ATTHFT 262 (305)
T ss_dssp HHHHH-HTTCSCEEECGGGGGSSCHHHHHHHHHH-HHHTTT
T ss_pred HHHHH-HcCCCEEEEcHHHHcCCCHHHHHHHHHH-HHHHhc
Confidence 35567 7899999999999999999999999887 554443
No 90
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=85.97 E-value=0.43 Score=47.11 Aligned_cols=36 Identities=17% Similarity=0.123 Sum_probs=32.1
Q ss_pred cCCHHHHHHH-cCCCEEEeCCcccC--CCCHHHHHHHHHH
Q psy4093 261 YNGPTDVITL-RGADLGVVGRGITQ--APDPVEAARRYKE 297 (434)
Q Consensus 261 ~~TP~~Ai~~-~GAD~IVVGR~It~--A~DP~~aa~~i~~ 297 (434)
...-.+|+ + .|+.-+++||.|.+ .+||.++++.+..
T Consensus 255 L~~v~~A~-~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~ 293 (307)
T 3fok_A 255 FASWEHAL-TLPGVRGLTVGRTLLYPQDGDVAAAVDTAAR 293 (307)
T ss_dssp HHHHHHHT-TSTTEEEEEECTTTSSCSSSCHHHHHHHHHH
T ss_pred HHHHHHHH-HhCCCeEEeechhhccCCCCCHHHHHHHHHH
Confidence 45668889 8 79999999999999 9999999998876
No 91
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=85.27 E-value=4.8 Score=40.48 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=26.5
Q ss_pred ceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 241 LLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 241 ~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
.++...||+-. .+...|+ .+|||.+.|||++..++.
T Consensus 201 PVIAdGGI~~~----------~di~kAL-a~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 201 SIVADGGIKTS----------GDIVKAL-AFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp EEEEESCCCSH----------HHHHHHH-HTTCSEEEESGGGTTBTT
T ss_pred CEEEECCCCCH----------HHHHHHH-HcCCCEEEEChHHhCCcc
Confidence 34556777621 2456788 899999999999998753
No 92
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=84.99 E-value=3.8 Score=39.42 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCHHHHHH--HcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 262 NGPTDVIT--LRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 262 ~TP~~Ai~--~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
.||++|.. .+|||.+.|||++.. .|| ...+++++ +.+.++.+.+
T Consensus 252 ~~~~da~~~l~~GAd~V~vg~~~l~-~~p-~~~~~i~~-~l~~~l~~~g 297 (311)
T 1jub_A 252 ETGQDAFEHLLCGATMLQIGTALHK-EGP-AIFDRIIK-ELEEIMNQKG 297 (311)
T ss_dssp CSHHHHHHHHHHTCSEEEECHHHHH-HCT-HHHHHHHH-HHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCEEEEchHHHh-cCc-HHHHHHHH-HHHHHHHHcC
Confidence 46666541 589999999999996 345 35666665 5556666654
No 93
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=84.77 E-value=0.54 Score=44.18 Aligned_cols=74 Identities=9% Similarity=-0.102 Sum_probs=55.0
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeee---ecCCHHHHHHHHHHHhcC-CCeeeecC--CCCcchhHHHHH
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAV---RDFSEEVQKELTALAKQH-EFLRSRNG--WFSPILSSFSLR 415 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~---~~~g~~~v~~L~~la~k~-gf~iFlDl--Kf~DIpnTV~~a 415 (434)
++.|+|+|+.+.++.++.+++.|...-.++|.-..| ..+|++++++|++ + |..+|+|. +..|...-++..
T Consensus 8 ~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~----~~~~~~~~dvhLmv~~p~~~i~~~ 83 (228)
T 3ovp_A 8 GPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRK----QLGQDPFFDMHMMVSKPEQWVKPM 83 (228)
T ss_dssp EEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHH----HHCSSSCEEEEEECSCGGGGHHHH
T ss_pred eeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHH----hhCCCCcEEEEEEeCCHHHHHHHH
Confidence 356888999999999999999999888888877776 5789999999964 3 44566665 444444455555
Q ss_pred hhcC
Q psy4093 416 FRDD 419 (434)
Q Consensus 416 ~~~~ 419 (434)
...|
T Consensus 84 ~~aG 87 (228)
T 3ovp_A 84 AVAG 87 (228)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 5544
No 94
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=84.39 E-value=0.45 Score=47.47 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=31.1
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEA 302 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a 302 (434)
.+++ +.|+|-+.|||+|..|.||.++++++++ .++.
T Consensus 258 ~~~l-~~GaDgV~VGsaI~~a~dP~~aar~l~~-ai~~ 293 (330)
T 2yzr_A 258 ALMM-QLGSDGVFVGSGIFKSENPLERARAIVE-ATYN 293 (330)
T ss_dssp HHHH-HTTCSCEEESHHHHTSSCHHHHHHHHHH-HHHT
T ss_pred HHHH-HcCcCEEeeHHHHhcCCCHHHHHHHHHH-HHHh
Confidence 4456 7899999999999999999999999987 5544
No 95
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=84.19 E-value=0.46 Score=46.66 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=33.4
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQR 306 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~ 306 (434)
..+++ ++|||.++||+.|++++||.++++++++ .++.|...
T Consensus 224 v~~~~-~~GAdgVlVGsai~~a~dp~~~~~~l~~-ai~~~~~~ 264 (297)
T 4adt_A 224 AAMCM-QLGMDGVFVGSGIFESENPQKMASSIVM-AVSNFNNP 264 (297)
T ss_dssp HHHHH-HTTCSCEEESHHHHTSSCHHHHHHHHHH-HHHTTTCH
T ss_pred HHHHH-HcCCCEEEEhHHHHcCCCHHHHHHHHHH-HHHhhCCH
Confidence 34567 8999999999999999999999999987 55554433
No 96
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=84.18 E-value=8.9 Score=39.29 Aligned_cols=40 Identities=13% Similarity=-0.002 Sum_probs=27.9
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
.+++ .+|||.+-|||+.... .| ..+++|.+ +.++++++.+
T Consensus 361 ~e~l-~aGAd~VqIgra~l~~-GP-~~~~~i~~-~L~~~l~~~G 400 (415)
T 3i65_A 361 LEKI-EAGASVCQLYSCLVFN-GM-KSAVQIKR-ELNHLLYQRG 400 (415)
T ss_dssp HHHH-HHTEEEEEESHHHHHH-GG-GHHHHHHH-HHHHHHHHTT
T ss_pred HHHH-HcCCCEEEEcHHHHhc-CH-HHHHHHHH-HHHHHHHHcC
Confidence 4557 7899999999998643 23 35667765 5666666654
No 97
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=80.44 E-value=3.1 Score=41.21 Aligned_cols=24 Identities=29% Similarity=0.421 Sum_probs=19.4
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
.+++ +.| +|+|-+||++...+|-.
T Consensus 304 ~~~l-~~G~aD~V~iGR~~lanPdl~ 328 (349)
T 3hgj_A 304 ETLL-QAGSADLVLLGRVLLRDPYFP 328 (349)
T ss_dssp HHHH-HTTSCSEEEESTHHHHCTTHH
T ss_pred HHHH-HCCCceEEEecHHHHhCchHH
Confidence 4556 778 99999999999887744
No 98
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=80.28 E-value=4.2 Score=38.63 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=25.5
Q ss_pred CHHHH--HHHcCCCEEEeCCcccCC--CCHHHHHHHHHH
Q psy4093 263 GPTDV--ITLRGADLGVVGRGITQA--PDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~A--i~~~GAD~IVVGR~It~A--~DP~~aa~~i~~ 297 (434)
||+++ + .+|||.+|||..|+++ +|+.+.++++.+
T Consensus 217 t~e~~~~~-~~gADgvIVGSai~~~~~~~~~~~~~~~~~ 254 (262)
T 2ekc_A 217 KKEHAREI-GSFADGVVVGSALVKLAGQKKIEDLGNLVK 254 (262)
T ss_dssp SHHHHHHH-HTTSSEEEECHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHH-HcCCCEEEECHHHHhhhhhhhHHHHHHHHH
Confidence 44444 4 6899999999999987 666666666665
No 99
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.76 E-value=0.93 Score=41.83 Aligned_cols=31 Identities=35% Similarity=0.382 Sum_probs=26.1
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+..+++ ++|||.++|||+|+. |.++++++++
T Consensus 200 ~~~~~~-~~Gad~v~vGsal~~---p~~~~~~l~~ 230 (234)
T 1yxy_A 200 EAKKIN-DLGVAGIVVGGAITR---PKEIAERFIE 230 (234)
T ss_dssp HHHHHH-TTCCSEEEECHHHHC---HHHHHHHHHH
T ss_pred HHHHHH-HCCCCEEEEchHHhC---hHHHHHHHHH
Confidence 445677 899999999999997 8888888875
No 100
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.08 E-value=0.68 Score=42.46 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=36.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAY 303 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~ 303 (434)
++..-||.+. +..+++ +.|++.+.||+.|..++||.++ +++++ ..++|
T Consensus 147 viaiGGI~~~-----------nv~~~~-~~Ga~gVav~s~i~~~~d~~~~-~~~~~-~v~~~ 194 (210)
T 3ceu_A 147 VMALGGINED-----------NLLEIK-DFGFGGAVVLGDLWNKFDACLD-QNYLA-VIEHF 194 (210)
T ss_dssp EEEESSCCTT-----------THHHHH-HTTCSEEEESHHHHTTCCTTTS-SCCHH-HHHHH
T ss_pred EEEECCCCHH-----------HHHHHH-HhCCCEEEEhHHhHcCCCHHHH-HHHHH-HHHHH
Confidence 3556677753 568999 8999999999999999999866 66654 44443
No 101
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=76.89 E-value=0.49 Score=44.10 Aligned_cols=49 Identities=14% Similarity=0.152 Sum_probs=35.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCC--CHHHHHHHHHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAP--DPVEAARRYKEVMWEAY 303 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~--DP~~aa~~i~~~~~~a~ 303 (434)
+.+.-||+.. .+..+++ ++|||.+|||+.|+++. || ++++++.+ .++..
T Consensus 194 i~~~GGI~~~----------e~i~~~~-~~Gad~vivGsai~~~~~~~~-~~~~~~~~-~~~~~ 244 (248)
T 1geq_A 194 VAVGFGVSKR----------EHVVSLL-KEGANGVVVGSALVKIIGEKG-REATEFLK-KKVEE 244 (248)
T ss_dssp EEEESCCCSH----------HHHHHHH-HTTCSEEEECHHHHHHHHHHG-GGCHHHHH-HHHHH
T ss_pred EEEEeecCCH----------HHHHHHH-HcCCCEEEEcHHHHhhHhhCh-HHHHHHHH-HHHHH
Confidence 4666777751 2456777 89999999999999874 66 77777776 44443
No 102
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=76.20 E-value=9 Score=38.47 Aligned_cols=26 Identities=27% Similarity=0.272 Sum_probs=20.7
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
..+++ +.| ||+|-+||+.+..+|-..
T Consensus 313 a~~~l-~~g~aD~V~igR~~l~~P~l~~ 339 (377)
T 2r14_A 313 AQARL-DDNTADAVAFGRPFIANPDLPE 339 (377)
T ss_dssp HHHHH-HTTSCSEEEESHHHHHCTTHHH
T ss_pred HHHHH-HCCCceEEeecHHHHhCchHHH
Confidence 35667 677 999999999998877554
No 103
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=76.18 E-value=30 Score=35.62 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=26.5
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
.+++ .+|||.+-|||+... .+| ..+++|++ +...++.+.+
T Consensus 389 ~e~l-~aGAd~Vqigrall~-~gP-~l~~~i~~-~l~~~l~~~G 428 (443)
T 1tv5_A 389 LEKI-EAGASVCQLYSCLVF-NGM-KSAVQIKR-ELNHLLYQRG 428 (443)
T ss_dssp HHHH-HTTEEEEEESHHHHH-HGG-GHHHHHHH-HHHHHHHHHT
T ss_pred HHHH-HcCCCEEEEcHHHHh-cCh-HHHHHHHH-HHHHHHHHhC
Confidence 4556 789999999999543 244 35666665 4456666654
No 104
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=74.92 E-value=12 Score=37.34 Aligned_cols=26 Identities=35% Similarity=0.491 Sum_probs=20.9
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
..+++ +.| ||+|-+||++...+|...
T Consensus 308 a~~~l-~~g~aD~V~~gR~~l~~P~~~~ 334 (364)
T 1vyr_A 308 AEDLI-GKGLIDAVAFGRDYIANPDLVA 334 (364)
T ss_dssp HHHHH-HTTSCSEEEESHHHHHCTTHHH
T ss_pred HHHHH-HCCCccEEEECHHHHhChhHHH
Confidence 35667 677 999999999999877654
No 105
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=74.84 E-value=5 Score=39.97 Aligned_cols=25 Identities=24% Similarity=0.209 Sum_probs=20.0
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
.+++ +.| ||+|.+||+....+|-..
T Consensus 311 ~~~l-~~G~aD~V~iGR~~lanPdl~~ 336 (363)
T 3l5l_A 311 EAAL-QANQLDLVSVGRAHLADPHWAY 336 (363)
T ss_dssp HHHH-HTTSCSEEECCHHHHHCTTHHH
T ss_pred HHHH-HCCCccEEEecHHHHhCchHHH
Confidence 4557 778 999999999999888443
No 106
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=73.79 E-value=2.1 Score=40.77 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=27.1
Q ss_pred CHHHHH--HHcCCCEEEeCCcccCCCCHHHHHHHHH
Q psy4093 263 GPTDVI--TLRGADLGVVGRGITQAPDPVEAARRYK 296 (434)
Q Consensus 263 TP~~Ai--~~~GAD~IVVGR~It~A~DP~~aa~~i~ 296 (434)
||+++. .+ |+|-++||++|+.++||.+++++++
T Consensus 219 s~~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l~ 253 (254)
T 1vc4_A 219 RKEELKALEG-LFDAVLIGTSLMRAPDLEAALRELV 253 (254)
T ss_dssp SHHHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred CHHHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHHh
Confidence 455542 16 9999999999999999999998774
No 107
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=73.54 E-value=9.8 Score=37.93 Aligned_cols=26 Identities=35% Similarity=0.413 Sum_probs=20.9
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
..+++ +.| ||.|-+||++...+|...
T Consensus 307 a~~~l-~~g~aD~V~igR~~i~~P~l~~ 333 (365)
T 2gou_A 307 AEQAI-NDGLADMIGFGRPFIANPDLPE 333 (365)
T ss_dssp HHHHH-HTTSCSEEECCHHHHHCTTHHH
T ss_pred HHHHH-HCCCcceehhcHHHHhCchHHH
Confidence 35667 777 999999999998877554
No 108
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=73.53 E-value=1.9 Score=39.28 Aligned_cols=31 Identities=32% Similarity=0.448 Sum_probs=25.7
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+..+++ ++|||.++|||+|+. |..+++++++
T Consensus 189 ~~~~~~-~~Gad~v~vG~al~~---p~~~~~~~~~ 219 (223)
T 1y0e_A 189 MYKRVM-DLGVHCSVVGGAITR---PKEITKRFVQ 219 (223)
T ss_dssp HHHHHH-HTTCSEEEECHHHHC---HHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEChHHcC---cHHHHHHHHH
Confidence 446677 899999999999997 8888887764
No 109
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=73.19 E-value=5.4 Score=39.25 Aligned_cols=25 Identities=28% Similarity=0.489 Sum_probs=20.5
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
.+++ +.| ||+|.+||+....+|-..
T Consensus 293 ~~~l-~~G~aD~V~iGR~~i~nPdl~~ 318 (338)
T 1z41_A 293 EEIL-QNGRADLIFIGRELLRDPFFAR 318 (338)
T ss_dssp HHHH-HTTSCSEEEECHHHHHCTTHHH
T ss_pred HHHH-HcCCceEEeecHHHHhCchHHH
Confidence 4567 777 999999999999887654
No 110
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=70.94 E-value=36 Score=31.58 Aligned_cols=29 Identities=28% Similarity=0.296 Sum_probs=24.4
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.+++ +.|||-++||..|+. |...++++++
T Consensus 197 ~~~~-~~GadgV~VGsal~~---p~~~~~~~~~ 225 (232)
T 3igs_A 197 AEAI-RYGAWAVTVGSAITR---LEHICGWYND 225 (232)
T ss_dssp HHHH-HTTCSEEEECHHHHC---HHHHHHHHHH
T ss_pred HHHH-HcCCCEEEEehHhcC---HHHHHHHHHH
Confidence 4566 789999999999994 8888888876
No 111
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=70.71 E-value=25 Score=34.11 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=17.6
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPV 289 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~ 289 (434)
..+++ +.|||.+-|||+... +||.
T Consensus 304 a~~~l-~~GAd~V~igr~~l~-~~P~ 327 (336)
T 1f76_A 304 AREKI-AAGASLVQIYSGFIF-KGPP 327 (336)
T ss_dssp HHHHH-HHTCSEEEESHHHHH-HCHH
T ss_pred HHHHH-HCCCCEEEeeHHHHh-cCcH
Confidence 34556 789999999999765 2453
No 112
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=70.43 E-value=25 Score=36.32 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=20.4
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
....|+ ..|||.+.+||++..+++
T Consensus 372 di~kal-a~GAd~V~iG~~~l~~~e 395 (514)
T 1jcn_A 372 HVVKAL-ALGASTVMMGSLLAATTE 395 (514)
T ss_dssp HHHHHH-HTTCSEEEESTTTTTSTT
T ss_pred HHHHHH-HcCCCeeeECHHHHcCCc
Confidence 456788 899999999999998765
No 113
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=69.71 E-value=4 Score=37.44 Aligned_cols=72 Identities=7% Similarity=-0.014 Sum_probs=50.5
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEce-e-ee---ecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHS-D-AV---RDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~-d-l~---~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
..|+|+|+.+..+.++.+.+.|.. +++++. | .| ..++++.+++|++ ..++.++.+++++|-...+..+.+
T Consensus 15 p~i~a~d~~~~~~~i~~~~~~G~d--~i~l~~~dg~f~~~~~~~~~~i~~l~~---~~~~~~~v~l~vnd~~~~v~~~~~ 89 (230)
T 1rpx_A 15 PSILSANFSKLGEQVKAIEQAGCD--WIHVDVMDGRFVPNITIGPLVVDSLRP---ITDLPLDVHLMIVEPDQRVPDFIK 89 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCC--CEEEEEEBSSSSSCBCCCHHHHHHHGG---GCCSCEEEEEESSSHHHHHHHHHH
T ss_pred EEeecCCHHHHHHHHHHHHHCCCC--EEEEeeccCCcccccccCHHHHHHHHh---ccCCcEEEEEEecCHHHHHHHHHH
Confidence 457788999999988888888754 455542 1 11 2467888888853 337899999999993336777766
Q ss_pred cC
Q psy4093 418 DD 419 (434)
Q Consensus 418 ~~ 419 (434)
.|
T Consensus 90 ~G 91 (230)
T 1rpx_A 90 AG 91 (230)
T ss_dssp TT
T ss_pred cC
Confidence 55
No 114
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=69.69 E-value=68 Score=31.91 Aligned_cols=42 Identities=24% Similarity=0.166 Sum_probs=27.5
Q ss_pred CHHHH---HHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 263 GPTDV---ITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 263 TP~~A---i~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
|+++| + .+|||.+-|||++... +|. .+++|.+ +...++.+.+
T Consensus 309 s~~da~~~l-~~GAd~V~vgra~l~~-gP~-~~~~i~~-~l~~~m~~~G 353 (367)
T 3zwt_A 309 SGQDALEKI-RAGASLVQLYTALTFW-GPP-VVGKVKR-ELEALLKEQG 353 (367)
T ss_dssp SHHHHHHHH-HHTCSEEEESHHHHHH-CTH-HHHHHHH-HHHHHHHHTT
T ss_pred CHHHHHHHH-HcCCCEEEECHHHHhc-CcH-HHHHHHH-HHHHHHHHcC
Confidence 45554 5 6899999999998432 453 5566665 5556665543
No 115
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=69.06 E-value=1.8 Score=40.00 Aligned_cols=18 Identities=33% Similarity=0.881 Sum_probs=15.5
Q ss_pred ccccCCCCeecEEEcCCc
Q psy4093 37 SIDRWPGGLIPYYIDDDH 54 (434)
Q Consensus 37 ~~~rWPn~~VpY~I~~~~ 54 (434)
...|||+++|||.|++++
T Consensus 6 ~~~~Wp~~~VpY~I~~~~ 23 (201)
T 3edh_A 6 PERVWPDGVIPFVIGGNF 23 (201)
T ss_dssp GGGSCGGGEEEEEECSSC
T ss_pred CCCcCCCcEEEEEECCCC
Confidence 568999999999998764
No 116
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=68.83 E-value=1.4 Score=40.92 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=26.9
Q ss_pred HHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 266 DVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 266 ~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.+. +.|+|-++||+.|++++||.++++++++
T Consensus 187 ~~~-~~gaDgvlVGsAi~~~~d~~~~~~~l~~ 217 (219)
T 2h6r_A 187 AAL-DLGAEGVLLASGVVKAKNVEEAIRELIK 217 (219)
T ss_dssp HHH-TTTCCCEEESHHHHTCSSHHHHHHHHCC
T ss_pred HHh-hCCCCEEEEcHHHhCcccHHHHHHHHHH
Confidence 345 7899999999999999999999888764
No 117
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=66.83 E-value=12 Score=39.87 Aligned_cols=27 Identities=26% Similarity=0.427 Sum_probs=21.2
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHHHHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPVEAA 292 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~~aa 292 (434)
.+++ +.| +|+|-+||++...+|....+
T Consensus 296 ~~~l-~~g~aD~V~~gR~~l~~P~l~~k~ 323 (671)
T 1ps9_A 296 DDIL-SRGDADMVSMARPFLADAELLSKA 323 (671)
T ss_dssp HHHH-HTTSCSEEEESTHHHHCTTHHHHH
T ss_pred HHHH-HcCCCCEEEeCHHHHhCcHHHHHH
Confidence 3456 677 99999999999998876433
No 118
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=65.33 E-value=3.7 Score=37.97 Aligned_cols=34 Identities=21% Similarity=0.154 Sum_probs=26.4
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCC-CHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAP-DPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~-DP~~aa~~i~~ 297 (434)
+..+++ +.|+|.++|||.|+.++ ||.++.+.+++
T Consensus 209 d~~~~~-~~Gadgv~vGsal~~~~~~~~~~~~~l~~ 243 (253)
T 1thf_D 209 HFLEAF-LAGADAALAASVFHFREIDVRELKEYLKK 243 (253)
T ss_dssp HHHHHH-HTTCSEEEESHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHH-HcCChHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 345667 78999999999999998 77766555443
No 119
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=64.06 E-value=11 Score=37.33 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=19.3
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
.+++ +.| ||.|.+||+....+|-.
T Consensus 293 ~~~L-~~G~aD~V~iGR~~lanPdl~ 317 (340)
T 3gr7_A 293 EEIL-QNGRADLVFLGRELLRNPYWP 317 (340)
T ss_dssp HHHH-HTTSCSEEEECHHHHHCTTHH
T ss_pred HHHH-HCCCeeEEEecHHHHhCchHH
Confidence 4556 678 99999999999877744
No 120
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=63.37 E-value=23 Score=35.30 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=20.1
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
..+++ +.| +|+|-+||+.+..+|-.
T Consensus 301 a~~~l-~~G~aD~V~iGR~~ladPdl~ 326 (361)
T 3gka_A 301 AQAAL-DAGQADAVAWGKLFIANPDLP 326 (361)
T ss_dssp HHHHH-HTTSCSEEEESHHHHHCTTHH
T ss_pred HHHHH-HcCCccEEEECHHhHhCcHHH
Confidence 35567 676 99999999999988754
No 121
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=62.81 E-value=54 Score=30.35 Aligned_cols=29 Identities=24% Similarity=0.271 Sum_probs=23.0
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
.+++ +.|||-++||..|+. |...++++.+
T Consensus 197 ~~~~-~~GadgV~VGsai~~---p~~~~~~f~~ 225 (229)
T 3q58_A 197 ANAI-EHGAWAVTVGSAITR---IEHICQWFSH 225 (229)
T ss_dssp HHHH-HTTCSEEEECHHHHC---HHHHHHHHHH
T ss_pred HHHH-HcCCCEEEEchHhcC---hHHHHHHHHH
Confidence 3456 789999999999995 7777777765
No 122
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=62.07 E-value=35 Score=34.13 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=18.9
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
.+++ +.| +|+|-+||+....+|-.
T Consensus 322 ~~~l-~~g~aD~V~igR~~l~~P~l~ 346 (379)
T 3aty_A 322 DQQI-REGKVDAVAFGAKFIANPDLV 346 (379)
T ss_dssp HHHH-HTTSCSEEEESHHHHHCTTHH
T ss_pred HHHH-HcCCCeEEEecHHHHhCcHHH
Confidence 5567 676 99999999999876633
No 123
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=61.75 E-value=3.8 Score=37.35 Aligned_cols=31 Identities=13% Similarity=0.030 Sum_probs=24.0
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARR 294 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~ 294 (434)
+..+++ +.|||.++|||.|+...++.+.+.+
T Consensus 212 ~~~~~~-~~Ga~~v~vgsal~~~~~~~~~~~~ 242 (253)
T 1h5y_A 212 HFYEAA-AAGADAVLAASLFHFRVLSIAQVKR 242 (253)
T ss_dssp HHHHHH-HTTCSEEEESHHHHTTSSCHHHHHH
T ss_pred HHHHHH-HcCCcHHHHHHHHHcCCCCHHHHHH
Confidence 446677 7899999999999999876544433
No 124
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=60.90 E-value=36 Score=32.48 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=16.8
Q ss_pred CHHH---HHHHcCCCEEEeCCcccC
Q psy4093 263 GPTD---VITLRGADLGVVGRGITQ 284 (434)
Q Consensus 263 TP~~---Ai~~~GAD~IVVGR~It~ 284 (434)
||++ ++ .+|||.+|||-.|++
T Consensus 217 ~~e~~~~~~-~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 217 EPEQVRAAI-KAGAAGAISGSAVVK 240 (267)
T ss_dssp SHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred CHHHHHHHH-HcCCCEEEECHHHHH
Confidence 4554 45 799999999998875
No 125
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=59.78 E-value=26 Score=34.16 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=24.5
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPDPVEAARRYKE 297 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~ 297 (434)
+..+++ ..|||.+.||+++..+++. .+.+.+++
T Consensus 190 dv~~al-~~GA~gV~vGs~~~~~~e~-~~~~~~k~ 222 (326)
T 3bo9_A 190 GMAAAF-ALGAEAVQMGTRFVASVES-DVHPVYKE 222 (326)
T ss_dssp HHHHHH-HHTCSEEEESHHHHTBSSC-CSCHHHHH
T ss_pred HHHHHH-HhCCCEEEechHHHcCccc-cccHHHHH
Confidence 346778 8999999999999998775 33344443
No 126
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=59.53 E-value=50 Score=32.90 Aligned_cols=25 Identities=28% Similarity=0.361 Sum_probs=19.4
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
..+++ +.| +|+|-+||+.+..+|-.
T Consensus 315 a~~~l-~~g~aD~V~~gR~~l~~P~l~ 340 (376)
T 1icp_A 315 GNRAL-IEDRADLVAYGRLFISNPDLP 340 (376)
T ss_dssp HHHHH-HTTSCSEEEESHHHHHCTTHH
T ss_pred HHHHH-HCCCCcEEeecHHHHhCccHH
Confidence 35567 666 99999999999877644
No 127
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.24 E-value=33 Score=36.63 Aligned_cols=62 Identities=11% Similarity=0.024 Sum_probs=34.8
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeE----ceee-----eec--CCHHHHHHHHHHHhcC-CCeeeecCC
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKT----HSDA-----VRD--FSEEVQKELTALAKQH-EFLRSRNGW 404 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKv----g~dl-----~~~--~g~~~v~~L~~la~k~-gf~iFlDlK 404 (434)
.=+||..-..-...|..|++. |-.|.++== |-.+ +.. ...++++.+.+..+++ |..+.++.+
T Consensus 393 ~VvIIGgG~AGl~aA~~La~~-G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 466 (690)
T 3k30_A 393 RVLVVGAGPSGLEAARALGVR-GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESP 466 (690)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCC
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCe
Confidence 347888888888899999886 555544311 1000 000 0023455555555566 778777754
No 128
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=57.12 E-value=7.3 Score=35.69 Aligned_cols=41 Identities=22% Similarity=0.037 Sum_probs=30.4
Q ss_pred EecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCH---HHHHHHHH
Q psy4093 243 QLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDP---VEAARRYK 296 (434)
Q Consensus 243 ~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP---~~aa~~i~ 296 (434)
.-+-||.+. +..+.+ ++|+|.++||..|+. .|| .+.+++++
T Consensus 155 vaiGGI~~~-----------n~~~~l-~aGa~~vavgSai~~-~d~~~i~~~a~~~~ 198 (207)
T 2yw3_A 155 LPTGGIKEE-----------HLPHYA-ALPNLLAVGGSWLLQ-GNLEAVRAKVRAAK 198 (207)
T ss_dssp EEBSSCCGG-----------GHHHHH-TCSSBSCEEESGGGS-SCHHHHHHHHHHHH
T ss_pred EEeCCCCHH-----------HHHHHH-hCCCcEEEEehhhhC-CCHHHHHHHHHHHH
Confidence 346677653 567888 999999999999999 885 44444444
No 129
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=56.66 E-value=62 Score=30.94 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=16.9
Q ss_pred CHHH---HHHHcCCCEEEeCCcccC
Q psy4093 263 GPTD---VITLRGADLGVVGRGITQ 284 (434)
Q Consensus 263 TP~~---Ai~~~GAD~IVVGR~It~ 284 (434)
||++ ++ ..|||-+|||-.|++
T Consensus 219 t~e~~~~~~-~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 219 EPAQVKQAI-EAGAAGAISGSAVVK 242 (271)
T ss_dssp SHHHHHHHH-HTTCSEEEESHHHHH
T ss_pred CHHHHHHHH-HcCCCEEEECHHHHH
Confidence 4554 55 799999999999986
No 130
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=55.90 E-value=50 Score=32.03 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=20.1
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDP 288 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP 288 (434)
..+++ ..|||.+.|||++..+++.
T Consensus 177 ~~~al-~~GAdgV~vGs~~l~~~e~ 200 (332)
T 2z6i_A 177 AAAGF-MLGAEAVQVGTRFVVAKES 200 (332)
T ss_dssp HHHHH-HTTCSEEEECHHHHTBTTC
T ss_pred HHHHH-HcCCCEEEecHHHhcCccc
Confidence 35667 7999999999999998753
No 131
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=53.66 E-value=8.5 Score=37.00 Aligned_cols=42 Identities=24% Similarity=0.303 Sum_probs=28.2
Q ss_pred CHHHH---HHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 263 GPTDV---ITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 263 TP~~A---i~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
||++| + .+|||.+.|||++.. .|| ...+++++ +...++.+.+
T Consensus 255 ~~~da~~~l-~~GAd~V~ig~~~l~-~~p-~~~~~i~~-~l~~~~~~~g 299 (314)
T 2e6f_A 255 SGEDAFLHI-LAGASMVQVGTALQE-EGP-GIFTRLED-ELLEIMARKG 299 (314)
T ss_dssp SHHHHHHHH-HHTCSSEEECHHHHH-HCT-THHHHHHH-HHHHHHHHHT
T ss_pred CHHHHHHHH-HcCCCEEEEchhhHh-cCc-HHHHHHHH-HHHHHHHHcC
Confidence 55555 5 689999999999996 234 35566665 4456666554
No 132
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=53.65 E-value=10 Score=36.11 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.5
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLK 308 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~ 308 (434)
.+++ +.|||.+.|||+++..++ ..+++++ .++.|+.+.+
T Consensus 257 ~~~l-~~GAd~V~vg~~~l~~p~---~~~~i~~-~l~~~~~~~g 295 (311)
T 1ep3_A 257 LEMY-MAGASAVAVGTANFADPF---VCPKIID-KLPELMDQYR 295 (311)
T ss_dssp HHHH-HHTCSEEEECTHHHHCTT---HHHHHHH-HHHHHHHHTT
T ss_pred HHHH-HcCCCEEEECHHHHcCcH---HHHHHHH-HHHHHHHHcC
Confidence 4556 689999999999999655 3445554 4555655443
No 133
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=53.03 E-value=7.1 Score=36.61 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=23.0
Q ss_pred CHHHHHHHcCCCEEEeCCcccCC----CCHHHHHHHHH
Q psy4093 263 GPTDVITLRGADLGVVGRGITQA----PDPVEAARRYK 296 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A----~DP~~aa~~i~ 296 (434)
+..+++ +.|||.+|||..|+++ .||.+..++++
T Consensus 215 ~~~~~~-~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~ 251 (262)
T 1rd5_A 215 HVKQIA-QWGADGVIIGSAMVRQLGEAASPKQGLRRLE 251 (262)
T ss_dssp HHHHHH-HTTCSEEEECHHHHHHHHSSSSHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEChHHHhHHHhccChhHHHHHHH
Confidence 345556 7899999999999875 35665444444
No 134
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=52.67 E-value=13 Score=35.15 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=52.0
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeee---ecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhcC
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAV---RDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRDD 419 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~---~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~~ 419 (434)
.-|+|+|+.+.++.++.+++.|...-.+.|.-..| ..+|+++++.|++.. .+..+=.+|+..|...-++.....|
T Consensus 32 pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~--p~~~ldvHLmv~~p~~~i~~~~~aG 109 (246)
T 3inp_A 32 PSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYG--ITAGMDVHLMVKPVDALIESFAKAG 109 (246)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHT--CCSCEEEEEECSSCHHHHHHHHHHT
T ss_pred hhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhC--CCCeEEEEEeeCCHHHHHHHHHHcC
Confidence 44677899999999999999987766666554445 467999999997521 1344445566666666666666555
No 135
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=52.56 E-value=50 Score=32.93 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=19.4
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
+..+|+ ..|||.+.|||++..+++
T Consensus 270 d~~~al-a~GAd~V~iG~~~l~~~e 293 (404)
T 1eep_A 270 DVVKAI-AAGADSVMIGNLFAGTKE 293 (404)
T ss_dssp HHHHHH-HHTCSEEEECHHHHTBTT
T ss_pred HHHHHH-HcCCCHHhhCHHHhcCCC
Confidence 446778 899999999999976644
No 136
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=52.23 E-value=89 Score=30.78 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=18.6
Q ss_pred CHHHHHHHcCCCEEEeCCcccCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A 285 (434)
....|+ ..|||.+.|||+++.+
T Consensus 237 di~kAl-alGA~~V~vG~~fl~~ 258 (351)
T 2c6q_A 237 DVAKAF-GAGADFVMLGGMLAGH 258 (351)
T ss_dssp HHHHHH-HTTCSEEEESTTTTTB
T ss_pred HHHHHH-HcCCCceeccHHHhcC
Confidence 446778 8999999999999865
No 137
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=51.73 E-value=22 Score=37.14 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=74.7
Q ss_pred eCCcccCCC-------CHHHHHHHHHHHHHHHHHHHH---hhcccccccChhhhhhhccchhhHHHHHHhhhcCCcEEEE
Q psy4093 278 VGRGITQAP-------DPVEAARRYKEVMWEAYEQRL---KKENSRIVTPFETRKADVKCRISSTLLDIMVKKKSNLCVA 347 (434)
Q Consensus 278 VGR~It~A~-------DP~~aa~~i~~~~~~a~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k~s~LivA 347 (434)
-||||..+- .|.+-++...+ .|..-+.-+ +.++|....+|++|....+..+- +-..+.-.+-..+
T Consensus 174 ~~RPllgtiiKPklGLsp~~~a~~~ye-~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~----rA~~eTGe~k~~~ 248 (493)
T 1bwv_A 174 FGRPLLGCTTKPKLGLSGKNYGRVVYE-ALKGGLDFVKDDENINSQPFMRWRERYLFTMEAVN----KASAATGEVKGHY 248 (493)
T ss_dssp CSSCEEECBCSSSSCCCHHHHHHHHHH-HHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHH----HHHHHHTSCCEEE
T ss_pred CCCCeEEeecCCccCCCHHHHHHHHHH-HHhcCCCcccCccccCCCCCCcHHHHHHHHHHHHH----HHHHhhCCcceee
Confidence 388887763 46666666665 666554333 57889999999999865433222 2222221223344
Q ss_pred ecCCC--HHHHHH---HHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCC
Q psy4093 348 LDVTQ--AKDLLT---LTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFS 406 (434)
Q Consensus 348 lD~~~--~~~al~---la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~ 406 (434)
+.++. .++..+ +|.++|..+.| ++++. |...+..|...++..+..|+.=+-+|
T Consensus 249 ~NiTa~~~~eM~~Ra~~a~e~G~~~~m----vd~~~--G~~a~~~l~~~~r~~~l~lh~HRAgh 306 (493)
T 1bwv_A 249 LNVTAATMEEMYARANFAKELGSVIIM----IDLVI--GYTAIQTMAKWARDNDMILHLHRAGN 306 (493)
T ss_dssp EECCCSSHHHHHHHHHHHHHTTCSEEE----EEGGG--CHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCeEE----Eeccc--ChHHHHHHHHHHhhcCcEEEecCCCc
Confidence 55443 566544 55566765543 55555 89999999887777788888888777
No 138
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=51.69 E-value=6.3 Score=36.74 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=16.1
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVEAARRYK 296 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~ 296 (434)
..+++ +.|||.++||+.|+.++++.+.+.++.
T Consensus 215 ~~~~~-~~Gadgv~vgsal~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 215 FLEAF-LAGADAALAASVFHFREIDMRELKEYL 246 (266)
T ss_dssp HHHHH-HHTCSEEEESTTTC-------------
T ss_pred HHHHH-HcCCHHHHccHHHHcCCCCHHHHHHHH
Confidence 35556 689999999999999997766555443
No 139
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=50.05 E-value=34 Score=33.67 Aligned_cols=20 Identities=20% Similarity=0.184 Sum_probs=15.4
Q ss_pred ccCCHHHH-------HHHcCCCEEEeCC
Q psy4093 260 QYNGPTDV-------ITLRGADLGVVGR 280 (434)
Q Consensus 260 Q~~TP~~A-------i~~~GAD~IVVGR 280 (434)
++.++++| + +.|||+|=||-
T Consensus 44 ~~~~~~~al~~A~~~v-~~GAdIIDIGg 70 (314)
T 3tr9_A 44 PHLDLNSALRTAEKMV-DEGADILDIGG 70 (314)
T ss_dssp BCCSHHHHHHHHHHHH-HTTCSEEEEEC
T ss_pred ccCCHHHHHHHHHHHH-HCCCCEEEECC
Confidence 66666665 5 78999999994
No 140
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=50.02 E-value=50 Score=34.04 Aligned_cols=201 Identities=16% Similarity=0.110 Sum_probs=105.4
Q ss_pred HhccccceEEEccc-CCchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHH---hhcchhhHHHHHhhhccCCCCC
Q psy4093 129 LIGEWAHLVTVHSI-AGPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYT---QVGFKAITLELKKYLCNNQVLP 204 (434)
Q Consensus 129 ~~~~~~d~vTvH~~-~G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~---~~g~~~~~~~~~~~~~~~~~~~ 204 (434)
+...+||++-+-+. -..+-++.+.+.+++.| +.++++..+ .++.. ++|..- +|+|++...
T Consensus 126 a~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lg----m~~LvEvh~-----~eE~~~A~~lga~i-------IGinnr~L~ 189 (452)
T 1pii_A 126 ARYYQADACLLMLSVLDDDQYRQLAAVAHSLE----MGVLTEVSN-----EEEQERAIALGAKV-------VGINNRDLR 189 (452)
T ss_dssp HHHTTCSEEEEETTTCCHHHHHHHHHHHHHTT----CEEEEEECS-----HHHHHHHHHTTCSE-------EEEESEETT
T ss_pred HHHcCCCEEEEEcccCCHHHHHHHHHHHHHcC----CeEEEEeCC-----HHHHHHHHHCCCCE-------EEEeCCCCC
Confidence 33447887665544 34467888887777654 556776665 22222 222221 345554443
Q ss_pred CCCchHHHHHHHHhhcCCCCceEEeCccchhhcCCCceEe-cCcccccCCCCCCCCccCCHHHHH--HHcCCCEEEeCCc
Q psy4093 205 KCDNDVQETLKLAQSFPGLIAGLVCQAPSVLASNPGLLQL-TPGIHLNQTGDNKGQQYNGPTDVI--TLRGADLGVVGRG 281 (434)
Q Consensus 205 ~~~~~~e~v~~lA~~a~~gv~GvVcs~~e~~~~~~~~l~v-tPGIr~~~~~~~~~dQ~~TP~~Ai--~~~GAD~IVVGR~ 281 (434)
..+.+.+...+++.... ++.+.| --||. ||+++. .+. +|-++||.+
T Consensus 190 t~~~dl~~~~~L~~~ip-----------------~~~~vIaEsGI~-------------t~edv~~~~~~-a~avLVGea 238 (452)
T 1pii_A 190 DLSIDLNRTRELAPKLG-----------------HNVTVISESGIN-------------TYAQVRELSHF-ANGFLIGSA 238 (452)
T ss_dssp TTEECTHHHHHHHHHHC-----------------TTSEEEEESCCC-------------CHHHHHHHTTT-CSEEEECHH
T ss_pred CCCCCHHHHHHHHHhCC-----------------CCCeEEEECCCC-------------CHHHHHHHHHh-CCEEEEcHH
Confidence 34444455555555432 122222 13444 555543 156 899999999
Q ss_pred ccCCCCHHHHHHHHHHH------------HHHHHHHHHhhcccccccChhhhhh-hccchhhHHHHHHhhhcCCcEEEEe
Q psy4093 282 ITQAPDPVEAARRYKEV------------MWEAYEQRLKKENSRIVTPFETRKA-DVKCRISSTLLDIMVKKKSNLCVAL 348 (434)
Q Consensus 282 It~A~DP~~aa~~i~~~------------~~~a~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~l~~~m~~k~s~LivAl 348 (434)
|+.++||.++.+++... ...++ +.+ -.-+..-|-.+.. -.+-..++ +|+... .-..|++
T Consensus 239 lmr~~d~~~~~~~l~~~~~KICGit~~eda~~a~--~~G--ad~iGfIf~~~SpR~V~~~~a~---~i~~~~-~v~~VgV 310 (452)
T 1pii_A 239 LMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAY--DAG--AIYGGLIFVATSPRCVNVEQAQ---EVMAAA-PLQYVGV 310 (452)
T ss_dssp HHTCSCHHHHHHHHHHCSCEECCCCSHHHHHHHH--HHT--CSEEEEECCTTCTTBCCHHHHH---HHHHHC-CCEEEEE
T ss_pred HcCCcCHHHHHHHHHHHhccccCCCcHHHHHHHH--hcC--CCEEEeecCCCCCCCCCHHHHH---HHHhcC-CCCEEEE
Confidence 99999999999988731 11111 111 0111111111100 00111222 233322 2234555
Q ss_pred -cCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHH
Q psy4093 349 -DVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTA 390 (434)
Q Consensus 349 -D~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~ 390 (434)
=.++.+++.+++++++..+ +.+| -+..+++++.|+.
T Consensus 311 Fvn~~~~~i~~~~~~~~ld~--vQLH----G~E~~~~~~~l~~ 347 (452)
T 1pii_A 311 FRNHDIADVVDKAKVLSLAA--VQLH----GNEEQLYIDTLRE 347 (452)
T ss_dssp ESSCCHHHHHHHHHHHTCSE--EEEC----SCCCHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHhcCCCE--EEEC----CCCCHHHHHHHHh
Confidence 3346899999999987654 4555 4567888888753
No 141
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=49.69 E-value=3.5 Score=38.35 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEeCCcccCCCCHHHHHHHH
Q psy4093 265 TDVITLRGADLGVVGRGITQAPDPVEAARRY 295 (434)
Q Consensus 265 ~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i 295 (434)
.+++ +.|+|.++|||+|+.++||...+++.
T Consensus 216 ~~~~-~~Gad~v~vg~al~~~p~~~~~~~~~ 245 (247)
T 3tdn_A 216 LEAF-LRGADKVSINTAAVENPSLITQIAQT 245 (247)
T ss_dssp -------------------------------
T ss_pred HHHH-HcCCcHhhccHHHHcCcHHHHHHHHh
Confidence 4556 78999999999999999998766543
No 142
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=48.84 E-value=1.4e+02 Score=31.01 Aligned_cols=35 Identities=14% Similarity=0.257 Sum_probs=25.6
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
++...||+-. .....|+ ..|||.++|||++..+..
T Consensus 362 VIa~GGI~~~----------~di~kal-a~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 362 VIADGGIKYS----------GDMVKAL-AAGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp EEEESCCCSH----------HHHHHHH-HTTCSEEEESTTTTTBTT
T ss_pred EEEeCCCCCH----------HHHHHHH-HhCchhheecHHHhcCcc
Confidence 4556777732 2345678 899999999999987654
No 143
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=48.30 E-value=1.7e+02 Score=28.87 Aligned_cols=24 Identities=13% Similarity=0.176 Sum_probs=20.3
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
+...|+ .+|||.+.||+.+..+++
T Consensus 221 di~kal-a~GAd~V~vGs~~~~t~E 244 (361)
T 3khj_A 221 DIGKAL-AVGASSVMIGSILAGTEE 244 (361)
T ss_dssp HHHHHH-HHTCSEEEESTTTTTBTT
T ss_pred HHHHHH-HcCCCEEEEChhhhcCCc
Confidence 345678 899999999999999765
No 144
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=48.05 E-value=39 Score=33.67 Aligned_cols=25 Identities=24% Similarity=0.302 Sum_probs=19.8
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
..+++ +.| +|+|-+||+....+|-.
T Consensus 293 a~~~l-~~g~aD~V~iGR~~lanPdl~ 318 (362)
T 4ab4_A 293 ANAAL-ASGKADAVAFGVPFIANPDLP 318 (362)
T ss_dssp HHHHH-HTTSCSEEEESHHHHHCTTHH
T ss_pred HHHHH-HcCCccEEEECHHhHhCcHHH
Confidence 35567 666 99999999999888744
No 145
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=47.05 E-value=2e+02 Score=27.82 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=19.0
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAP 286 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~ 286 (434)
+...|+ ..|||.+.|||++..++
T Consensus 224 Dv~kal-alGAdaV~iGr~~l~t~ 246 (336)
T 1ypf_A 224 DVAKSI-RFGATMVMIGSLFAGHE 246 (336)
T ss_dssp HHHHHH-HTTCSEEEESGGGTTCT
T ss_pred HHHHHH-HcCCCEEEeChhhhccc
Confidence 456778 89999999999999643
No 146
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=46.78 E-value=53 Score=32.09 Aligned_cols=61 Identities=8% Similarity=0.051 Sum_probs=45.9
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCC---eeeecCCCCcch
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEF---LRSRNGWFSPIL 409 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf---~iFlDlKf~DIp 409 (434)
..||-.+.-.+.++++.+|.+.+--+|+ .|.. ..++.+++.+.+.++|+ .|++|==+--++
T Consensus 151 k~iINdvs~~~~~~~~~~aa~~g~~vv~--m~~~-----dv~~l~~~~~~a~~~Gi~~e~IilDPg~g~~g 214 (310)
T 2h9a_B 151 NCLLSSATKDNYKPIVATCMVHGHSVVA--SAPL-----DINLSKQLNIMIMEMNLAPNRIIMDPLIGALG 214 (310)
T ss_dssp CCEEEEECTTTHHHHHHHHHHHTCEEEE--ECSS-----CHHHHHHHHHHHHTTTCCGGGEEEECCCCCTT
T ss_pred CCEEEECCCCccHHHHHHHHHhCCCEEE--EChh-----HHHHHHHHHHHHHHCCCChhhEEEeCCCcccc
Confidence 3477777666788999999999988776 3441 24778888888889998 699998765466
No 147
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=46.31 E-value=1.7e+02 Score=30.02 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=19.8
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
....|+ .+|||.+.||+.+...+.
T Consensus 346 di~kal-~~GAd~V~vGs~~~~~~E 369 (490)
T 4avf_A 346 DLAKAM-VAGAYCVMMGSMFAGTEE 369 (490)
T ss_dssp HHHHHH-HHTCSEEEECTTTTTBTT
T ss_pred HHHHHH-HcCCCeeeecHHHhcCCC
Confidence 346678 899999999999998654
No 148
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=46.22 E-value=12 Score=34.45 Aligned_cols=29 Identities=10% Similarity=0.045 Sum_probs=22.4
Q ss_pred HHHHHHHcCCCEEEeCCcccCCC-CHHHHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAP-DPVEAAR 293 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~-DP~~aa~ 293 (434)
..+++ +.|+|.++|||.|+.++ +|.++.+
T Consensus 211 ~~~~~-~~Gadgv~vgsal~~~~~~~~~~~~ 240 (252)
T 1ka9_F 211 FLEAF-QAGAEAALAASVFHFGEIPIPKLKR 240 (252)
T ss_dssp HHHHH-HTTCSEEEESHHHHTTSSCHHHHHH
T ss_pred HHHHH-HCCCHHHHHHHHHHcCCCCHHHHHH
Confidence 34556 78999999999999998 5555444
No 149
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=45.30 E-value=1.3e+02 Score=29.68 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=29.5
Q ss_pred cCCCceEecCcccccCCCCCCCCc-cCCHHHHHHHcCC--CEEEeCCcccCCC
Q psy4093 237 SNPGLLQLTPGIHLNQTGDNKGQQ-YNGPTDVITLRGA--DLGVVGRGITQAP 286 (434)
Q Consensus 237 ~~~~~l~vtPGIr~~~~~~~~~dQ-~~TP~~Ai~~~GA--D~IVVGR~It~A~ 286 (434)
+.-.++++.-|+.. +. ..+...|+ ++|| .-+.+||.|.+..
T Consensus 244 ~~~P~v~lsgG~~~--------~~fl~~v~~A~-~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 244 TDLPYIYLSAGVSA--------ELFQETLVFAH-KAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp CSSCEEEECTTCCH--------HHHHHHHHHHH-HHTCCCCEEEECHHHHTTH
T ss_pred CCCCEEEECCCCCH--------HHHHHHHHHHH-HcCCCcceEEeeHHHHHhh
Confidence 33455566766531 12 35778999 9999 8999999999973
No 150
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=44.81 E-value=49 Score=32.14 Aligned_cols=119 Identities=13% Similarity=0.134 Sum_probs=61.5
Q ss_pred HHHHcCCCEEEeC----CcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChhhhhhhccchhhHHHHHHhhhcCC
Q psy4093 267 VITLRGADLGVVG----RGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFETRKADVKCRISSTLLDIMVKKKS 342 (434)
Q Consensus 267 Ai~~~GAD~IVVG----R~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k~s 342 (434)
-+ +.|||+|=|| ||=...-++.++.+++.. ..++..+.. .+.++--+... .+++.-++. -.
T Consensus 72 ~v-~~GAdiIDIGgeStrPga~~v~~~eE~~Rvvp-vI~~l~~~~-----~vpiSIDT~~~----~V~~aAl~a----Ga 136 (297)
T 1tx2_A 72 MR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVP-MIQAVSKEV-----KLPISIDTYKA----EVAKQAIEA----GA 136 (297)
T ss_dssp HH-HTTCSEEEEESCC----CCCCCHHHHHHHHHH-HHHHHHHHS-----CSCEEEECSCH----HHHHHHHHH----TC
T ss_pred HH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHH-HHHHHHhcC-----CceEEEeCCCH----HHHHHHHHc----CC
Confidence 35 7999999999 333233355666666553 333333221 22222222110 133322222 23
Q ss_pred cEEEEecCCC---HHHHHHHHHHhCCceeEEeEceeeeecCC------HHHHHHHHHHHhcCCCe---eeecCC
Q psy4093 343 NLCVALDVTQ---AKDLLTLTRQLGPHIAVLKTHSDAVRDFS------EEVQKELTALAKQHEFL---RSRNGW 404 (434)
Q Consensus 343 ~LivAlD~~~---~~~al~la~~lgp~i~~lKvg~dl~~~~g------~~~v~~L~~la~k~gf~---iFlDlK 404 (434)
.|| .|+.- .++++.++.+.+-.+|.. |..-...+. .++.++..+.+.+.|+. |++|==
T Consensus 137 ~iI--Ndvsg~~~d~~m~~~aa~~g~~vVlm--h~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg 206 (297)
T 1tx2_A 137 HII--NDIWGAKAEPKIAEVAAHYDVPIILM--HNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPG 206 (297)
T ss_dssp CEE--EETTTTSSCTHHHHHHHHHTCCEEEE--CCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred CEE--EECCCCCCCHHHHHHHHHhCCcEEEE--eCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCC
Confidence 455 44432 457888999888777653 321101110 34556666778889987 999964
No 151
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=44.68 E-value=1.2e+02 Score=30.14 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=20.3
Q ss_pred CHHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
....|+ .+|||.+.||+.+..++.
T Consensus 225 di~kal-a~GAd~V~vGs~f~~t~E 248 (366)
T 4fo4_A 225 DISKAI-AAGASCVMVGSMFAGTEE 248 (366)
T ss_dssp HHHHHH-HTTCSEEEESTTTTTBTT
T ss_pred HHHHHH-HcCCCEEEEChHhhcCCC
Confidence 346788 899999999999998765
No 152
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=44.47 E-value=15 Score=35.20 Aligned_cols=55 Identities=16% Similarity=0.044 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCC
Q psy4093 351 TQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWF 405 (434)
Q Consensus 351 ~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf 405 (434)
-....+..+.+..|++|-++|.|---+.=...+.+++..+++++||..++....|
T Consensus 23 lg~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl 77 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTL 77 (251)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHH
T ss_pred CCHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHH
Confidence 4688899999999999999999977777677889999999999999999988753
No 153
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=43.12 E-value=84 Score=30.95 Aligned_cols=25 Identities=28% Similarity=0.306 Sum_probs=20.7
Q ss_pred HHHHHHHcC-CCEEEeCCcccCCCCHH
Q psy4093 264 PTDVITLRG-ADLGVVGRGITQAPDPV 289 (434)
Q Consensus 264 P~~Ai~~~G-AD~IVVGR~It~A~DP~ 289 (434)
.++++ +.| ||+|-+||+...-+|=.
T Consensus 300 ae~~l-~~G~aD~V~~gR~~ladPdlp 325 (358)
T 4a3u_A 300 AQAAL-DSGVADAISFGRPFIGNPDLP 325 (358)
T ss_dssp HHHHH-HHTSCSEEEESHHHHHCTTHH
T ss_pred HHHHH-HcCCceEeHhhHHHHhChhHH
Confidence 45678 677 89999999999998854
No 154
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=42.71 E-value=1.7e+02 Score=29.68 Aligned_cols=33 Identities=12% Similarity=0.224 Sum_probs=24.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A 285 (434)
++..-|||-. .....|+ ..|||.+++||+++.+
T Consensus 339 via~GGi~~~----------~di~kal-~~GA~~v~vG~~~~~~ 371 (491)
T 1zfj_A 339 IIADGGIKYS----------GDIVKAL-AAGGNAVMLGSMFAGT 371 (491)
T ss_dssp EEEESCCCSH----------HHHHHHH-HTTCSEEEESTTTTTB
T ss_pred EEeeCCCCCH----------HHHHHHH-HcCCcceeeCHHhhCC
Confidence 4556677732 2346688 8999999999999864
No 155
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=42.48 E-value=1.3e+02 Score=31.04 Aligned_cols=23 Identities=22% Similarity=0.258 Sum_probs=18.9
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCC
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~D 287 (434)
...|+ .+|||.+.+||.+.....
T Consensus 349 i~kal-a~GAd~V~iGs~f~~t~E 371 (496)
T 4fxs_A 349 ISKAI-AAGASCVMVGSMFAGTEE 371 (496)
T ss_dssp HHHHH-HTTCSEEEESTTTTTBTT
T ss_pred HHHHH-HcCCCeEEecHHHhcCCC
Confidence 35577 899999999999998653
No 156
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=42.08 E-value=39 Score=33.38 Aligned_cols=25 Identities=28% Similarity=0.391 Sum_probs=19.6
Q ss_pred HHHHHHcC-CCEEEeCCcccCCCCHHH
Q psy4093 265 TDVITLRG-ADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 265 ~~Ai~~~G-AD~IVVGR~It~A~DP~~ 290 (434)
.+++ +.| +|+|-+||+....+|-..
T Consensus 293 e~~l-~~G~aD~V~iGR~~lanPdl~~ 318 (343)
T 3kru_A 293 EEIL-SNERADLVALGRELLRNPYWVL 318 (343)
T ss_dssp HHHH-HTTSCSEEEESHHHHHCTTHHH
T ss_pred HHHH-hchhhHHHHHHHHHhcCCeEEE
Confidence 3456 667 999999999998877543
No 157
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=41.80 E-value=50 Score=32.02 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=16.6
Q ss_pred HHHHHHHcCCCEEEeCCcccCC
Q psy4093 264 PTDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A 285 (434)
..+|+ ..|||.+-|||+...+
T Consensus 271 ~~kal-~~GAd~V~igr~~l~~ 291 (332)
T 1vcf_A 271 GAKAL-ALGADLLAVARPLLRP 291 (332)
T ss_dssp HHHHH-HHTCSEEEECGGGHHH
T ss_pred HHHHH-HhCCChHhhhHHHHHH
Confidence 34556 6799999999999853
No 158
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=40.71 E-value=90 Score=30.23 Aligned_cols=111 Identities=9% Similarity=-0.031 Sum_probs=58.6
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++.+. -+|.+.+....+.-..-|.
T Consensus 94 vpViaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~l---------~~~f~~va~a~~lPiilYn~P 159 (315)
T 3na8_A 94 VPTIVSVSDL----TTAKTVRRAQFAE-SLGAEAVMVLPISYWKLNEAEV---------FQHYRAVGEAIGVPVMLYNNP 159 (315)
T ss_dssp SCBEEECCCS----SHHHHHHHHHHHH-HTTCSEEEECCCCSSCCCHHHH---------HHHHHHHHHHCSSCEEEEECH
T ss_pred CcEEEecCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHHH---------HHHHHHHHHhCCCcEEEEeCc
Confidence 3455577632 2222233345666 8999999999999988776433 3344444322222222332
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.| +..+++-.++.-+..+-+| |+++ |- .|.....++.+..++.+.++
T Consensus 160 ~~---tg~~l~~~~~~~L~a~~pn-IvgiKdssgd~~~~~~~~~~~~~~f~v~ 208 (315)
T 3na8_A 160 GT---SGIDMSVELILRIVREVDN-VTMVKESTGDIQRMHKLRLLGEGRVPFY 208 (315)
T ss_dssp HH---HSCCCCHHHHHHHHHHSTT-EEEEEECSSCHHHHHHHHHHTTTCSCEE
T ss_pred ch---hCcCCCHHHHHHHHhcCCC-EEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 22 2223333322223123455 4566 33 25778888888887765544
No 159
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=39.69 E-value=64 Score=31.04 Aligned_cols=11 Identities=36% Similarity=0.299 Sum_probs=9.9
Q ss_pred HcCCCEEEeCC
Q psy4093 270 LRGADLGVVGR 280 (434)
Q Consensus 270 ~~GAD~IVVGR 280 (434)
+.|||+|=||=
T Consensus 49 ~~GAdiIDIGg 59 (282)
T 1aj0_A 49 NAGATIIDVGG 59 (282)
T ss_dssp HHTCSEEEEES
T ss_pred HCCCCEEEECC
Confidence 78999999995
No 160
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=39.29 E-value=79 Score=30.58 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=28.3
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~ 290 (434)
+-|..|++ + +..+.+.--+.|. +.|||.+.|--|-|...++.+
T Consensus 82 vpViaGvg----~-st~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~ 124 (314)
T 3d0c_A 82 ATVVAGIG----Y-SVDTAIELGKSAI-DSGADCVMIHQPVHPYITDAG 124 (314)
T ss_dssp SEEEEEEC----S-SHHHHHHHHHHHH-HTTCSEEEECCCCCSCCCHHH
T ss_pred CeEEecCC----c-CHHHHHHHHHHHH-HcCCCEEEECCCCCCCCCHHH
Confidence 35566776 2 2222233445566 899999999999998877543
No 161
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=37.94 E-value=1.6e+02 Score=29.94 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=17.6
Q ss_pred CHHHHHHHcCCCEEEeCCcccC
Q psy4093 263 GPTDVITLRGADLGVVGRGITQ 284 (434)
Q Consensus 263 TP~~Ai~~~GAD~IVVGR~It~ 284 (434)
....|+ ..|||.+.+||++..
T Consensus 354 di~kal-a~GAd~V~iGr~~l~ 374 (494)
T 1vrd_A 354 DIVKAL-AAGAESVMVGSIFAG 374 (494)
T ss_dssp HHHHHH-HTTCSEEEESHHHHT
T ss_pred HHHHHH-HcCCCEEEECHHHhc
Confidence 446778 899999999999964
No 162
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=37.33 E-value=80 Score=30.98 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=30.1
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeee
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFl 401 (434)
.+.+++|..+++-+.+-++. |.+++.|-.-..-.++.++++++|..+.+
T Consensus 117 ~vpISIDT~~~~VaeaAl~a----------Ga~iINDVsg~~d~~m~~vaa~~g~~vVl 165 (318)
T 2vp8_A 117 DQLISVDTWRAQVAKAACAA----------GADLINDTWGGVDPAMPEVAAEFGAGLVC 165 (318)
T ss_dssp TCEEEEECSCHHHHHHHHHH----------TCCEEEETTSSSSTTHHHHHHHHTCEEEE
T ss_pred CCeEEEeCCCHHHHHHHHHh----------CCCEEEECCCCCchHHHHHHHHhCCCEEE
Confidence 35678888888888776664 56676664211122344455667877666
No 163
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=36.99 E-value=45 Score=34.89 Aligned_cols=118 Identities=15% Similarity=0.112 Sum_probs=75.1
Q ss_pred eCCcccCC-------CCHHHHHHHHHHHHHHHHHHHH---hhcccccccChhhhhhhccchhhHHHHHHhhhcCCcEEEE
Q psy4093 278 VGRGITQA-------PDPVEAARRYKEVMWEAYEQRL---KKENSRIVTPFETRKADVKCRISSTLLDIMVKKKSNLCVA 347 (434)
Q Consensus 278 VGR~It~A-------~DP~~aa~~i~~~~~~a~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k~s~LivA 347 (434)
-||||..+ -.|.+-++...+ .|..-+.-+ +.++|....+|++|....+..+- +--++.-.+-..+
T Consensus 174 ~~RPllgtiiKPklGLs~~~~a~~~ye-~~~GGlDfIKDDE~l~~Qpf~p~~eRv~~v~eai~----rA~~eTGe~K~~~ 248 (493)
T 4f0h_A 174 FGRPLLGXTTKPKLGLSGKNYGRVVYE-ALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVN----KAAAATGEVKGHY 248 (493)
T ss_dssp CSSCEEEEBCSSSSCCCHHHHHHHHHH-HHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHH----HHHHHHSSCCEEE
T ss_pred CCCceEEEeeccccCCCHHHHHHHHHH-HHhcCCCccccccccCCCCCccHHHHHHHHHHHHH----HHHHhHCCcceEE
Confidence 48888764 246777776665 775553333 78899999999999876544333 2222211222455
Q ss_pred ecCC--CHHHHHH---HHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCC
Q psy4093 348 LDVT--QAKDLLT---LTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFS 406 (434)
Q Consensus 348 lD~~--~~~~al~---la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~ 406 (434)
+.++ +.+|.++ +|...|..+.+ ++++. |...+..|...+++.+..|+.=+-+|
T Consensus 249 ~NiTa~~~~eM~~Ra~~a~e~G~~~vm----vd~~~--G~~a~~~La~~~r~~~l~LH~HRAgh 306 (493)
T 4f0h_A 249 LNVTAATMEEMYARAQLAKELGSVIIM----IDLVI--GYTAIQTMAKWARDNDMILHLHRAGN 306 (493)
T ss_dssp EECCCSSHHHHHHHHHHHHHHTCSEEE----EEGGG--CHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred eecCCCCHHHHHHHHHHHHhcCCCeEE----Eeccc--ccchhHHHHHHHHHcCceEEeccCcc
Confidence 6766 3556554 45566655433 45544 89999999887777788887777666
No 164
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=36.20 E-value=63 Score=33.05 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=44.8
Q ss_pred EEecCCCHHHHHHHHHHhCCceeEEeEceeeeecC-----CHHHHHHHHHHHhcCCCeeeecC
Q psy4093 346 VALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDF-----SEEVQKELTALAKQHEFLRSRNG 403 (434)
Q Consensus 346 vAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~-----g~~~v~~L~~la~k~gf~iFlDl 403 (434)
..+.+.+.+.+.++.++-++.|+.+-+=- +.... .+++.++|++|+++||.+++.|=
T Consensus 200 ~~~p~nd~~~l~~~l~~~~~~iAavIvEP-v~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DE 261 (454)
T 4ao9_A 200 LVLPYNDAQTARAQIERHGPEIAVVLVEP-MQGASGCIPGQPDFLQALRESATQVGALLVFDE 261 (454)
T ss_dssp EEECTTCHHHHHHHHHHTGGGEEEEEECS-EESTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccCCCchHHHHHHHHhhcCCceEEEEecc-ccCCCCccCCchhhHHHHHHHHhhcCCEEEEEC
Confidence 44678899999999999999998776532 22222 37899999999999999988884
No 165
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=36.07 E-value=1.2e+02 Score=29.24 Aligned_cols=109 Identities=11% Similarity=0.130 Sum_probs=58.9
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+-|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++.+. -+|.+++....+.-..-|-
T Consensus 93 vpViaGvg~~----st~eai~la~~A~-~~Gadavlv~~P~y~~~s~~~l---------~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 93 IPVIAGTGAN----STREAVALTEAAK-SGGADACLLVTPYYNKPTQEGM---------YQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp SCEEEECCCS----SHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHHH---------HHHHHHHHHHSCSCEEEEECH
T ss_pred CcEEEeCCCc----CHHHHHHHHHHHH-HcCCCEEEEcCCCCCCCCHHHH---------HHHHHHHHHhcCCCEEEEeCc
Confidence 3455577732 2212233345566 8999999999999988765433 3444444432222233332
Q ss_pred hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.| +..+++-.+ .++. +-+| |+++ |- .+.....++.+..++...++
T Consensus 159 ~~---tg~~l~~~~~~~La--~~pn-IvgiKdssgd~~~~~~~~~~~~~~f~v~ 206 (314)
T 3qze_A 159 GR---TSCDMLPETVERLS--KVPN-IIGIKEATGDLQRAKEVIERVGKDFLVY 206 (314)
T ss_dssp HH---HSCCCCHHHHHHHH--TSTT-EEEEEECSCCHHHHHHHHHHSCTTSEEE
T ss_pred cc---cCCCCCHHHHHHHh--cCCC-EEEEEcCCCCHHHHHHHHHHcCCCeEEE
Confidence 23 222333222 2333 3456 4566 33 35778888888887766554
No 166
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.78 E-value=1.2e+02 Score=28.87 Aligned_cols=110 Identities=14% Similarity=0.105 Sum_probs=59.0
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
..|..|++-. +..+-+.--+.|. +.|+|.+.|--|-|...++.+ .-+|.+++....+.-..-|-
T Consensus 71 ~pviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~~~~~---------l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 71 IPIIAGTGAN----STREAIELTKAAK-DLGADAALLVTPYYNKPTQEG---------LYQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp SCEEEECCCS----SHHHHHHHHHHHH-HHTCSEEEEECCCSSCCCHHH---------HHHHHHHHHHHCCSCEEEEECH
T ss_pred CeEEEeCCCC----CHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCCHHH---------HHHHHHHHHHhcCCCEEEEecc
Confidence 3455577732 2212233345566 899999999999998776543 23444555432222233342
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.| +..+++-.++.-+. +-+| |+++ |- .|.....++.+..++.+.++
T Consensus 137 ~~---tg~~l~~~~~~~La-~~pn-ivgiK~ssgd~~~~~~~~~~~~~~f~v~ 184 (291)
T 3tak_A 137 GR---TGVDLSNDTAVRLA-EIPN-IVGIKDATGDVPRGKALIDALNGKMAVY 184 (291)
T ss_dssp HH---HSCCCCHHHHHHHT-TSTT-EEEEEECSCCHHHHHHHHHHHTTSSEEE
T ss_pred cc---cCCCCCHHHHHHHH-cCCC-EEEEEeCCCCHHHHHHHHHHcCCCeEEE
Confidence 22 22233322222222 3456 4566 32 35788888888887766554
No 167
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=34.78 E-value=40 Score=33.62 Aligned_cols=34 Identities=15% Similarity=0.251 Sum_probs=24.9
Q ss_pred ceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC
Q psy4093 241 LLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 241 ~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A 285 (434)
-++.+-||+-. .+..+++ ..|||.+.|||+++.+
T Consensus 280 pVia~GGI~~~----------~dv~kal-~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 280 PVLIDSGFRRG----------SDIVKAL-ALGAEAVLLGRATLYG 313 (380)
T ss_dssp CEEECSSCCSH----------HHHHHHH-HTTCSCEEESHHHHHH
T ss_pred eEEEECCCCCH----------HHHHHHH-HhCCcHhhehHHHHHH
Confidence 35667777632 2446778 7999999999999864
No 168
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.69 E-value=1.6e+02 Score=28.84 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=16.8
Q ss_pred CHHHH---HHHcCCCEEEeCCcccCCCC
Q psy4093 263 GPTDV---ITLRGADLGVVGRGITQAPD 287 (434)
Q Consensus 263 TP~~A---i~~~GAD~IVVGR~It~A~D 287 (434)
||++| + + |||.+.|||+.+..++
T Consensus 208 s~eda~~~l-~-GaD~V~iGRa~l~~P~ 233 (350)
T 3b0p_A 208 SLEEALFHL-K-RVDGVMLGRAVYEDPF 233 (350)
T ss_dssp SHHHHHHHH-T-TSSEEEECHHHHHCGG
T ss_pred CHHHHHHHH-h-CCCEEEECHHHHhCcH
Confidence 55544 5 4 9999999999875443
No 169
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=34.49 E-value=1.6e+02 Score=28.04 Aligned_cols=110 Identities=16% Similarity=0.161 Sum_probs=56.6
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
.-|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++.+. -+|.+.+....+.=..-|-
T Consensus 70 vpviaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~l---------~~~f~~va~a~~lPiilYn~P 135 (294)
T 2ehh_A 70 IKVIAGTGGN----ATHEAVHLTAHAK-EVGADGALVVVPYYNKPTQRGL---------YEHFKTVAQEVDIPIIIYNIP 135 (294)
T ss_dssp SEEEEECCCS----CHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHHH---------HHHHHHHHHHCCSCEEEEECH
T ss_pred CcEEEecCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHHH---------HHHHHHHHHhcCCCEEEEeCC
Confidence 3566777632 2212233345556 7999999999999987765433 3444444322222122222
Q ss_pred hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.| +..+++-.+ .++.. +.+| |+++ |- .|.....++.+..++.+.++
T Consensus 136 ~~---tg~~l~~~~~~~La~-~~pn-ivgiKds~gd~~~~~~~~~~~~~~f~v~ 184 (294)
T 2ehh_A 136 SR---TCVEISVDTMFKLAS-ECEN-IVASKESTPNMDRISEIVKRLGESFSVL 184 (294)
T ss_dssp HH---HSCCCCHHHHHHHHH-HCTT-EEEEEECCSCHHHHHHHHHHHCTTSEEE
T ss_pred cc---cCcCCCHHHHHHHHh-hCCC-EEEEEeCCCCHHHHHHHHHhcCCCeEEE
Confidence 23 222233222 23321 2355 4555 33 35777778887777665544
No 170
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=34.10 E-value=51 Score=33.13 Aligned_cols=60 Identities=18% Similarity=0.171 Sum_probs=36.5
Q ss_pred HHHHHhhcCCCCceEEeCccchh-----------------hcCCC-ceEecCcccccCCCCCCCCccCCHHHHHHHcCCC
Q psy4093 213 TLKLAQSFPGLIAGLVCQAPSVL-----------------ASNPG-LLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGAD 274 (434)
Q Consensus 213 v~~lA~~a~~gv~GvVcs~~e~~-----------------~~~~~-~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD 274 (434)
.++.+..+ |+|+++.|.+--. ..+++ -++..-|||-. .+...|+ ..|||
T Consensus 265 ~A~~a~~a--Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g----------~Dv~kal-alGAd 331 (392)
T 2nzl_A 265 DAREAVKH--GLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKG----------TDVLKAL-ALGAK 331 (392)
T ss_dssp HHHHHHHT--TCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSH----------HHHHHHH-HTTCS
T ss_pred HHHHHHHc--CCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCH----------HHHHHHH-HhCCC
Confidence 34455544 7999998764210 22212 23445666621 2345667 78999
Q ss_pred EEEeCCcccCC
Q psy4093 275 LGVVGRGITQA 285 (434)
Q Consensus 275 ~IVVGR~It~A 285 (434)
.+.||||+..+
T Consensus 332 ~V~iGr~~l~~ 342 (392)
T 2nzl_A 332 AVFVGRPIVWG 342 (392)
T ss_dssp EEEECHHHHHH
T ss_pred eeEECHHHHHH
Confidence 99999998865
No 171
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=33.81 E-value=65 Score=32.58 Aligned_cols=65 Identities=9% Similarity=0.190 Sum_probs=49.0
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCC-HHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhh
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFS-EEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFR 417 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g-~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~ 417 (434)
+-+-||+.+.+|..+.++.+-|..+.+ |+ .|++ +...+-++++..+.+.++|-| ||-.|+.-++.
T Consensus 112 ~pi~ldv~~~dE~v~~vk~~~p~f~~i--~l---ED~~~p~af~il~r~r~~~~Ipvf~D----DiqGTasV~lA 177 (388)
T 1vl6_A 112 FPICLSESEEEKIISIVKSLEPSFGGI--NL---EDIGAPKCFRILQRLSEEMNIPVFHD----DQQGTAVVVSA 177 (388)
T ss_dssp EEEECSCCCHHHHHHHHHHTGGGCSEE--EE---CSCCTTHHHHHHHHHHHHCSSCEEEH----HHHHHHHHHHH
T ss_pred EeEEeCCCCHHHHHHHHHHcCCcceEe--CH---hhcCCHHHHHHHHHhhhhcCcceecc----ccccHHHHHHH
Confidence 556689999999999999999997764 44 5553 555555666656678999997 89888765554
No 172
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=33.53 E-value=1.3e+02 Score=28.62 Aligned_cols=114 Identities=13% Similarity=0.107 Sum_probs=61.1
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...+..+. -+|.+.+....+.-..-|-
T Consensus 77 vpviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~~~~~l---------~~~f~~va~a~~lPiilYn~P 142 (297)
T 3flu_A 77 VPVIAGTGAN----NTVEAIALSQAAE-KAGADYTLSVVPYYNKPSQEGI---------YQHFKTIAEATSIPMIIYNVP 142 (297)
T ss_dssp SCEEEECCCS----SHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHHH---------HHHHHHHHHHCCSCEEEEECH
T ss_pred CcEEEeCCCc----CHHHHHHHHHHHH-HcCCCEEEECCCCCCCCCHHHH---------HHHHHHHHHhCCCCEEEEECC
Confidence 3455577732 2222233345666 8999999999999987765432 3444444433333333343
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEEeEcee
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVLKTHSD 375 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~lKvg~d 375 (434)
.| +..+++-.++.-+. +-+| |+++ |- .+.....++.+..++...++ .|.|
T Consensus 143 ~~---tg~~l~~~~~~~La-~~pn-ivgiKdssgd~~~~~~~~~~~~~~f~v~-~G~d 194 (297)
T 3flu_A 143 GR---TVVSMTNDTILRLA-EIPN-IVGVKEASGNIGSNIELINRAPEGFVVL-SGDD 194 (297)
T ss_dssp HH---HSSCCCHHHHHHHT-TSTT-EEEEEECSCCHHHHHHHHHHSCTTCEEE-ECCG
T ss_pred ch---hccCCCHHHHHHHH-cCCC-EEEEEeCCCCHHHHHHHHHhcCCCeEEE-ECcH
Confidence 23 22233322222222 3456 4566 33 35788888888887776554 3443
No 173
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=33.31 E-value=34 Score=32.80 Aligned_cols=114 Identities=11% Similarity=0.195 Sum_probs=67.2
Q ss_pred ccccceEEEc-ccCCchhHHHHHHHhhhhCCCCceEEEEEeCCCCCCChHHHHh---hcchhhHHHHHhhhccCCCCCCC
Q psy4093 131 GEWAHLVTVH-SIAGPGPLQEIQRISDELGEDRGVFLIAQLSCQGNLIDEKYTQ---VGFKAITLELKKYLCNNQVLPKC 206 (434)
Q Consensus 131 ~~~~d~vTvH-~~~G~~ml~~a~~~~~~~~~~~~v~~v~~lss~~sl~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~ 206 (434)
..|||+|-+= +.-+.+-++...+.+.+.| .. +|.+..+ .+++.. .|.. =+|+|++....+
T Consensus 124 ~~GADaILLI~a~L~~~~l~~l~~~A~~lG--l~--~LvEVh~-----~~El~rAl~~~a~-------iIGINNRnL~tf 187 (258)
T 4a29_A 124 NLGADTVLLIVKILTERELESLLEYARSYG--ME--PLILIND-----ENDLDIALRIGAR-------FIGIMSRDFETG 187 (258)
T ss_dssp HHTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CC--CEEEESS-----HHHHHHHHHTTCS-------EEEECSBCTTTC
T ss_pred HcCCCeeehHHhhcCHHHHHHHHHHHHHHh--HH--HHHhcch-----HHHHHHHhcCCCc-------EEEEeCCCcccc
Confidence 3367766433 3345566777777777666 22 4455443 333321 1211 156777766666
Q ss_pred CchHHHHHHHHhhcCCCCceEEeCccchhhcCCCceEec-CcccccCCCCCCCCccCCHHHH--HHHcCCCEEEeCCccc
Q psy4093 207 DNDVQETLKLAQSFPGLIAGLVCQAPSVLASNPGLLQLT-PGIHLNQTGDNKGQQYNGPTDV--ITLRGADLGVVGRGIT 283 (434)
Q Consensus 207 ~~~~e~v~~lA~~a~~gv~GvVcs~~e~~~~~~~~l~vt-PGIr~~~~~~~~~dQ~~TP~~A--i~~~GAD~IVVGR~It 283 (434)
+.+.+...+++.... ++.+.|+ -||+ ||+++ +.+.|+|-+.||.++.
T Consensus 188 ~vdl~~t~~L~~~ip-----------------~~~~~VsESGI~-------------t~~dv~~l~~~G~~a~LVGealm 237 (258)
T 4a29_A 188 EINKENQRKLISMIP-----------------SNVVKVAKLGIS-------------ERNEIEELRKLGVNAFLISSSLM 237 (258)
T ss_dssp CBCHHHHHHHHTTSC-----------------TTSEEEEEESSC-------------CHHHHHHHHHTTCCEEEECHHHH
T ss_pred ccCHHHHHHHHhhCC-----------------CCCEEEEcCCCC-------------CHHHHHHHHHCCCCEEEECHHHh
Confidence 666667777766442 2222332 3555 34443 2288999999999999
Q ss_pred CCCCHHH
Q psy4093 284 QAPDPVE 290 (434)
Q Consensus 284 ~A~DP~~ 290 (434)
.++||.+
T Consensus 238 r~~d~~~ 244 (258)
T 4a29_A 238 RNPEKIK 244 (258)
T ss_dssp HCTTHHH
T ss_pred CCCcHHH
Confidence 9999864
No 174
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=33.21 E-value=1e+02 Score=29.83 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=58.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+ .-+|.+.+....+.-..-|-
T Consensus 92 vpViaGvg~~----st~~ai~la~~A~-~~Gadavlv~~P~y~~~~~~~---------l~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 92 VPVVAGAGSN----STSEAVELAKHAE-KAGADAVLVVTPYYNRPNQRG---------LYTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp SCBEEECCCS----SHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHH---------HHHHHHHHHHHCSSCEEEEECH
T ss_pred CcEEEeCCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHH---------HHHHHHHHHHcCCCCEEEEeCc
Confidence 3455577632 2222233345666 899999999999998776543 23444555433233233333
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.|. ..+++-.++.-+.++-+|+ +++ |- .|.....++.+..++.+.+|
T Consensus 158 ~~t---g~~l~~~~~~~La~~~pnI-vgiKdssgd~~~~~~l~~~~~~~f~v~ 206 (315)
T 3si9_A 158 SRS---VIDMAVETMRDLCRDFKNI-IGVKDATGKIERASEQREKCGKDFVQL 206 (315)
T ss_dssp HHH---SCCCCHHHHHHHHHHCTTE-EEEEECSCCTHHHHHHHHHHCSSSEEE
T ss_pred hhh---CCCCCHHHHHHHHhhCCCE-EEEEeCCCCHHHHHHHHHHcCCCeEEE
Confidence 232 2233322222222323554 555 33 35677888888887766554
No 175
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=32.87 E-value=55 Score=32.61 Aligned_cols=59 Identities=19% Similarity=0.180 Sum_probs=36.9
Q ss_pred HHHHhhcCCCCceEEeCccchh-----------------hcCCC-ceEecCcccccCCCCCCCCccCCHHHHHHHcCCCE
Q psy4093 214 LKLAQSFPGLIAGLVCQAPSVL-----------------ASNPG-LLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADL 275 (434)
Q Consensus 214 ~~lA~~a~~gv~GvVcs~~e~~-----------------~~~~~-~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~ 275 (434)
++.|..+ |+||++.|.+--. ..+++ -++..-||+-. .+...|+ ..|||.
T Consensus 231 A~~a~~~--GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g----------~Dv~kaL-alGA~a 297 (352)
T 3sgz_A 231 AELAMKH--NVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTG----------TDVLKAL-ALGARC 297 (352)
T ss_dssp HHHHHHT--TCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSH----------HHHHHHH-HTTCSE
T ss_pred HHHHHHc--CCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCH----------HHHHHHH-HcCCCE
Confidence 4445444 7999998764210 12222 23445666621 3446778 899999
Q ss_pred EEeCCcccCC
Q psy4093 276 GVVGRGITQA 285 (434)
Q Consensus 276 IVVGR~It~A 285 (434)
+.|||+...+
T Consensus 298 V~iGr~~l~~ 307 (352)
T 3sgz_A 298 IFLGRPILWG 307 (352)
T ss_dssp EEESHHHHHH
T ss_pred EEECHHHHHH
Confidence 9999998854
No 176
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=32.18 E-value=36 Score=35.14 Aligned_cols=130 Identities=15% Similarity=0.089 Sum_probs=78.2
Q ss_pred eCCcccCCC-------CHHHHHHHHHHHHHHHHHHHH---hhcccccccChhhhhhhccchhhHHHHHHhhhc-CCcEEE
Q psy4093 278 VGRGITQAP-------DPVEAARRYKEVMWEAYEQRL---KKENSRIVTPFETRKADVKCRISSTLLDIMVKK-KSNLCV 346 (434)
Q Consensus 278 VGR~It~A~-------DP~~aa~~i~~~~~~a~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k-~s~Liv 346 (434)
-||||+.+- .|.+-++...+ .|..-+.-+ +.++|....+|++|....+..+-+ --++. +.++ .
T Consensus 153 ~~RPllgtiiKPklGLs~~~~a~~~ye-~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~r----A~~eTGe~k~-y 226 (444)
T 3kdn_A 153 KDRPIYGVVPKPKVGYSPEEFEKLAYD-LLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDK----VENETGEKKT-W 226 (444)
T ss_dssp CSSCEEEECCSSSSCCCHHHHHHHHHH-HHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHH----HHHHHCCCCE-E
T ss_pred CCCceEEeecCcccCCCHHHHHHHHHH-HHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHH----HHHhhCCcce-E
Confidence 489988752 46676666665 665553333 789999999999998865544432 22221 2333 4
Q ss_pred EecCCC-HHHHH---HHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhcCccc
Q psy4093 347 ALDVTQ-AKDLL---TLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRDDKTL 422 (434)
Q Consensus 347 AlD~~~-~~~al---~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~~~~~ 422 (434)
++.++. .++.+ ++|..+|..+.+ ++.+ -.|+..++.|.+.+.+.|..|+.=+-+| .++..-+..
T Consensus 227 ~~NiTa~~~eM~~Ra~~a~e~G~~~~m----vd~~-~~G~~a~~~l~~~~~~~~l~lh~HrA~~-------ga~~r~~~h 294 (444)
T 3kdn_A 227 FANITADLLEMEQRLEVLADLGLKHAM----VDVV-ITGWGALRYIRDLAADYGLAIHGHRAMH-------AAFTRNPYH 294 (444)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCCEEE----EEHH-HHCHHHHHHHHHHHHHHTCEEEEECTTT-------HHHHSCTTS
T ss_pred EeecCCCHHHHHHHHHHHHHcCCCEEE----Eccc-cccHHHHHHHHHhccccCeEEEEccCcc-------cccccCCCC
Confidence 444443 45444 455566655432 3332 2588888888776656678888777766 344444555
Q ss_pred ccc
Q psy4093 423 AMS 425 (434)
Q Consensus 423 ~~~ 425 (434)
+|+
T Consensus 295 Gi~ 297 (444)
T 3kdn_A 295 GIS 297 (444)
T ss_dssp EEC
T ss_pred CcC
Confidence 554
No 177
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=31.67 E-value=30 Score=33.45 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=27.3
Q ss_pred ceEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCC
Q psy4093 241 LLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAP 286 (434)
Q Consensus 241 ~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~ 286 (434)
.+.++-||.+. +..+.. +.|+|+|+||+.|+.++
T Consensus 243 ~ieaSGGIt~~-----------~i~~~a-~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 243 MLESSGGLSLQ-----------TAATYA-ETGVDYLAVGALTHSVR 276 (284)
T ss_dssp EEEEESSCCTT-----------THHHHH-HTTCSEEECGGGTSSBC
T ss_pred EEEEECCCCHH-----------HHHHHH-hcCCCEEEECHHHcCCC
Confidence 34567888875 677888 89999999999888764
No 178
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=31.35 E-value=21 Score=30.87 Aligned_cols=14 Identities=21% Similarity=0.655 Sum_probs=12.8
Q ss_pred ccCCCCeecEEEcC
Q psy4093 39 DRWPGGLIPYYIDD 52 (434)
Q Consensus 39 ~rWPn~~VpY~I~~ 52 (434)
.|||+++|+|.|..
T Consensus 3 ~~W~~~~itY~i~~ 16 (160)
T 2jsd_A 3 PKWKKNTLTYRISK 16 (160)
T ss_dssp SSCSCSEEEEEECC
T ss_pred CcccCCeEEEEEeC
Confidence 68999999999975
No 179
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=30.17 E-value=67 Score=31.90 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=37.2
Q ss_pred HHHHHHhhcCCCCceEEeCccchh-----------------hcCC-CceEecCcccccCCCCCCCCccCCHHHHHHHcCC
Q psy4093 212 ETLKLAQSFPGLIAGLVCQAPSVL-----------------ASNP-GLLQLTPGIHLNQTGDNKGQQYNGPTDVITLRGA 273 (434)
Q Consensus 212 ~v~~lA~~a~~gv~GvVcs~~e~~-----------------~~~~-~~l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GA 273 (434)
..+++|..+ |+++++.|.+--. ..+. --++..-|||-. .+...|+ ..||
T Consensus 241 e~a~~a~~~--Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g----------~D~~kal-alGA 307 (368)
T 2nli_A 241 EDADMAIKR--GASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRG----------EHVAKAL-ASGA 307 (368)
T ss_dssp HHHHHHHHT--TCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSH----------HHHHHHH-HTTC
T ss_pred HHHHHHHHc--CCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCH----------HHHHHHH-HcCC
Confidence 345555555 7999998763110 2221 123455666621 2345667 7899
Q ss_pred CEEEeCCcccCC
Q psy4093 274 DLGVVGRGITQA 285 (434)
Q Consensus 274 D~IVVGR~It~A 285 (434)
|.+-||||...+
T Consensus 308 d~V~iGr~~l~~ 319 (368)
T 2nli_A 308 DVVALGRPVLFG 319 (368)
T ss_dssp SEEEECHHHHHH
T ss_pred CEEEECHHHHHH
Confidence 999999988754
No 180
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=29.84 E-value=1e+02 Score=29.56 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=26.8
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCC-HHHHHHHHHHHhcCCCeeee
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFS-EEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g-~~~v~~L~~la~k~gf~iFl 401 (434)
+.+++|..+++-+.+-++. |.+++.+-. ...-.++.++++++|..+.+
T Consensus 81 ~piSIDT~~~~va~aAl~a----------Ga~iINdvsg~~~d~~m~~~~a~~~~~vVl 129 (280)
T 1eye_A 81 ITVSIDTMRADVARAALQN----------GAQMVNDVSGGRADPAMGPLLAEADVPWVL 129 (280)
T ss_dssp CCEEEECSCHHHHHHHHHT----------TCCEEEETTTTSSCTTHHHHHHHHTCCEEE
T ss_pred CEEEEeCCCHHHHHHHHHc----------CCCEEEECCCCCCCHHHHHHHHHhCCeEEE
Confidence 4567788777777765553 556666542 11122334445566766655
No 181
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=29.47 E-value=2.9e+02 Score=26.50 Aligned_cols=109 Identities=11% Similarity=0.141 Sum_probs=58.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCC-CEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh-
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGA-DLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GA-D~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~- 319 (434)
+-|..|++-. +..+.+.--+.|. +.|+ |.+.|--|-|...++.+ .-+|.+.+....+.-..-|.
T Consensus 77 vpViaGvg~~----~t~~ai~la~~A~-~~Ga~davlv~~P~y~~~s~~~---------l~~~f~~va~a~~lPiilYn~ 142 (311)
T 3h5d_A 77 VPLIAGVGTN----DTRDSIEFVKEVA-EFGGFAAGLAIVPYYNKPSQEG---------MYQHFKAIADASDLPIIIYNI 142 (311)
T ss_dssp SCEEEECCCS----SHHHHHHHHHHHH-HSCCCSEEEEECCCSSCCCHHH---------HHHHHHHHHHSCSSCEEEEEC
T ss_pred CcEEEeCCCc----CHHHHHHHHHHHH-hcCCCcEEEEcCCCCCCCCHHH---------HHHHHHHHHHhCCCCEEEEec
Confidence 3555677632 2212222334555 6797 99999999998876543 33455555433333233343
Q ss_pred -hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cCCCHHHHHHHHHHhCCceeEE
Q psy4093 320 -TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DVTQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 -~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~~~~~~al~la~~lgp~i~~l 370 (434)
.|. ..+++-.+ .++. + .+| |+++ |-.|.....++.+..++.+.++
T Consensus 143 P~~t---g~~l~~~~~~~La-~-~pn-IvgiKdssd~~~~~~~~~~~~~~f~v~ 190 (311)
T 3h5d_A 143 PGRV---VVELTPETMLRLA-D-HPN-IIGVKECTSLANMAYLIEHKPEEFLIY 190 (311)
T ss_dssp HHHH---SSCCCHHHHHHHH-T-STT-EEEEEECSCHHHHHHHHHHCCSSCEEE
T ss_pred cccc---CCCCCHHHHHHHh-c-CCC-EEEEEeCCCHHHHHHHHHHcCCCEEEE
Confidence 232 22333222 2333 2 466 4555 5447778888888777765544
No 182
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=29.28 E-value=1.4e+02 Score=29.37 Aligned_cols=66 Identities=11% Similarity=0.005 Sum_probs=47.7
Q ss_pred CcEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCC---eeeecCCCCcchhHHHH
Q psy4093 342 SNLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEF---LRSRNGWFSPILSSFSL 414 (434)
Q Consensus 342 s~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf---~iFlDlKf~DIpnTV~~ 414 (434)
.+||-++-..+.+++..+|.+.+--+|++ |. ...++.+++.+++.++|+ .|++|==+.-++.+.+.
T Consensus 158 ~~lINsv~~~~~~~m~~laa~~g~~vVlm--h~-----~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~ 226 (323)
T 4djd_D 158 NLLLGNAEQENYKSLTAACMVHKHNIIAR--SP-----LDINICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEY 226 (323)
T ss_dssp CCEEEEEBTTBCHHHHHHHHHHTCEEEEE--CS-----SCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHH
T ss_pred CCeEEECCcccHHHHHHHHHHhCCeEEEE--cc-----chHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHH
Confidence 35777776655688999999998888764 32 124788888888899998 58999877655555543
No 183
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.57 E-value=69 Score=30.55 Aligned_cols=44 Identities=11% Similarity=-0.154 Sum_probs=27.9
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~ 290 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+
T Consensus 74 vpviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~~~~~ 117 (293)
T 1f6k_A 74 IALIAQVGSV----NLKEAVELGKYAT-ELGYDCLSAVTPFYYKFSFPE 117 (293)
T ss_dssp SEEEEECCCS----CHHHHHHHHHHHH-HHTCSEEEEECCCSSCCCHHH
T ss_pred CeEEEecCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHH
Confidence 4566777632 2212223344555 789999999999998877543
No 184
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=28.50 E-value=1.9e+02 Score=27.55 Aligned_cols=109 Identities=15% Similarity=0.136 Sum_probs=56.8
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+ +-+|.+.+....+.=..-|-
T Consensus 82 vpViaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~---------l~~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 82 VPVIAGTGSN----NTHASIDLTKKAT-EVGVDAVMLVAPYYNKPSQEG---------MYQHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp SCEEEECCCS----CHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHH---------HHHHHHHHHHTCSSCEEEEECH
T ss_pred ceEEeCCCCC----CHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCCHHH---------HHHHHHHHHHhcCCCEEEEeCc
Confidence 3455777632 2212223344556 799999999999998876643 33444455432222222232
Q ss_pred hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 320 TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.|. ..+++-.+ .+|. +-+| |+++ |- .|.....++.+..++...+|
T Consensus 148 ~~t---g~~l~~~~~~~La--~~pn-IvgiKdssgd~~~~~~~~~~~~~~f~v~ 195 (301)
T 1xky_A 148 GRS---IVQISVDTVVRLS--EIEN-IVAIKDAGGDVLTMTEIIEKTADDFAVY 195 (301)
T ss_dssp HHH---SSCCCHHHHHHHH--TSTT-EEEEEECSSCHHHHHHHHHHSCTTCEEE
T ss_pred ccc---CCCCCHHHHHHHH--cCCC-EEEEEcCCCCHHHHHHHHHhcCCCeEEE
Confidence 232 22233222 2332 2355 5555 33 35777888888777665543
No 185
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=26.77 E-value=2e+02 Score=29.48 Aligned_cols=60 Identities=8% Similarity=-0.030 Sum_probs=31.5
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceee-eecCCHHHHHHHHHHHhcCCCeeeecCCCC--cchhHHH
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDA-VRDFSEEVQKELTALAKQHEFLRSRNGWFS--PILSSFS 413 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl-~~~~g~~~v~~L~~la~k~gf~iFlDlKf~--DIpnTV~ 413 (434)
.+.+++|..+++-+.+-++... |.++ +.|-.-..-.++.++++++|..+.+ .| .+|.|++
T Consensus 269 ~vpISIDT~~~~VaeaAL~~~a--------Ga~i~INDVsg~~d~~m~~v~a~~g~~vVl---Mh~~G~P~tmq 331 (442)
T 3mcm_A 269 KPLVSIDTRKLEVMQKILAKHH--------DIIWMINDVECNNIEQKAQLIAKYNKKYVI---IHNLGITDRNQ 331 (442)
T ss_dssp CCEEEEECCCHHHHHHHHHHHG--------GGCCEEEECCCTTHHHHHHHHHHHTCEEEE---ECC--------
T ss_pred CCeEEEeCCCHHHHHHHHhhCC--------CCCEEEEcCCCCCChHHHHHHHHhCCeEEE---ECCCCCCcccc
Confidence 4677888888887777665322 4556 5553212333445556677877776 34 3555543
No 186
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=26.56 E-value=20 Score=32.82 Aligned_cols=31 Identities=16% Similarity=0.185 Sum_probs=23.0
Q ss_pred CHHHHHHHc---CCCEEEeCCcccCCCCHHHHHHH
Q psy4093 263 GPTDVITLR---GADLGVVGRGITQAPDPVEAARR 294 (434)
Q Consensus 263 TP~~Ai~~~---GAD~IVVGR~It~A~DP~~aa~~ 294 (434)
+..+++ +. |+|.++|||+|+.++.+.+.+.+
T Consensus 204 d~~~~~-~~~~~Gadgv~vG~al~~~~~~~~~~~~ 237 (244)
T 1vzw_A 204 DLRAIA-GLVPAGVEGAIVGKALYAKAFTLEEALE 237 (244)
T ss_dssp HHHHHH-TTGGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred HHHHHH-hhccCCCceeeeeHHHHcCCCCHHHHHH
Confidence 345566 67 99999999999999865544433
No 187
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=25.14 E-value=45 Score=34.24 Aligned_cols=118 Identities=13% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCcccCCC-------CHHHHHHHHHHHHHHHHHHHH---hhcccccccChhhhhhhccchhhHHHHHHhhhcCCcEEEEe
Q psy4093 279 GRGITQAP-------DPVEAARRYKEVMWEAYEQRL---KKENSRIVTPFETRKADVKCRISSTLLDIMVKKKSNLCVAL 348 (434)
Q Consensus 279 GR~It~A~-------DP~~aa~~i~~~~~~a~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~~l~~~m~~k~s~LivAl 348 (434)
||||..+- .|.+-++...+ .|..-+.-+ +.++|....+|++|....+..+- +-.++.-.+-..++
T Consensus 151 ~RPl~gtiiKPklGLs~~~~a~~~ye-~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~----ra~~eTGe~k~y~~ 225 (430)
T 2d69_A 151 DRPLTATVPKPKMGWSVEEYAEIAYE-LWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRD----RVEAETGETKEYLI 225 (430)
T ss_dssp SSCEEEECCSSSSCCCHHHHHHHHHH-HHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHH----HHHHHHSSCCEEEC
T ss_pred CCCeEEeecCCccCCCHHHHHHHHHH-HHhCCCcEeECCCCCCCCCCccHHHHHHHHHHHHH----HHHHhhCCccEEEe
Confidence 89987752 46666666664 665543333 57899999999999865433222 22222212233445
Q ss_pred cCCC-HHHHH---HHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeeecCCCC
Q psy4093 349 DVTQ-AKDLL---TLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSRNGWFS 406 (434)
Q Consensus 349 D~~~-~~~al---~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFlDlKf~ 406 (434)
.++. .+|.. ++|.++|..+.+ ++++. .|...++.|.+.++..+..|.-=+-+|
T Consensus 226 NiTa~~~em~~Ra~~a~e~G~~~~m----vd~~~-~G~~a~~~l~~~~r~~~l~lh~HrA~h 282 (430)
T 2d69_A 226 NITGPVNIMEKRAEMVANEGGQYVM----IDIVV-AGWSALQYMREVTEDLGLAIHAHRAMH 282 (430)
T ss_dssp BCCSSHHHHHHHHHHHHHHTCCEEE----EEHHH-HCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ecCCCHHHHHHHHHHHHHcCCCeEE----EEeec-cChHHHHHHHHHhhccCcEEEeccCCc
Confidence 5443 55554 455667776543 34333 478888888877666688888777776
No 188
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=24.94 E-value=51 Score=31.78 Aligned_cols=43 Identities=21% Similarity=0.142 Sum_probs=27.8
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPV 289 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~ 289 (434)
+-|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++.
T Consensus 86 vpviaGvg~~----st~~ai~la~~A~-~~Gadavlv~~P~y~~~~~~ 128 (304)
T 3cpr_A 86 AKLIAGVGTN----NTRTSVELAEAAA-SAGADGLLVVTPYYSKPSQE 128 (304)
T ss_dssp SEEEEECCCS----CHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHH
T ss_pred CcEEecCCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHH
Confidence 4566777732 2212233345566 79999999999999877654
No 189
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=24.86 E-value=1.6e+02 Score=28.80 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=56.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+ +-+|.+.+....+.=..-|-
T Consensus 101 vpViaGvg~~----st~eai~la~~A~-~~Gadavlv~~P~Y~~~s~~~---------l~~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 101 VPVLIGTGGT----NARETIELSQHAQ-QAGADGIVVINPYYWKVSEAN---------LIRYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp SCEEEECCSS----CHHHHHHHHHHHH-HHTCSEEEEECCSSSCCCHHH---------HHHHHHHHHHTCSSCEEEEECH
T ss_pred CcEEEecCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHH---------HHHHHHHHHHhcCCCEEEEeCc
Confidence 3455677632 2212233345556 789999999999998776543 33444455432222222232
Q ss_pred hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhC---CceeEE
Q psy4093 320 TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLG---PHIAVL 370 (434)
Q Consensus 320 ~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~-~~~~~al~la~~lg---p~i~~l 370 (434)
.|. ..+++-.+ .+|.+ +-+| |+++ |- .|.....++.+.++ +.+.+|
T Consensus 167 ~~t---g~~l~~e~~~~La~-~~pn-IvgiKdssgd~~~~~~l~~~~~~~~~~f~v~ 218 (343)
T 2v9d_A 167 ALT---GQDLTPALVKTLAD-SRSN-IIGIKDTIDSVAHLRSMIHTVKGAHPHFTVL 218 (343)
T ss_dssp HHH---SSCCCHHHHHHHHH-HCTT-EEEEEECCSCHHHHHHHHHHHHHHCTTCEEE
T ss_pred hhc---CcCCCHHHHHHHHH-hCCC-EEEEEeCCCCHHHHHHHHHhcCCCCCCEEEE
Confidence 232 22233222 23331 2355 5566 32 35677777777765 555443
No 190
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=24.84 E-value=66 Score=30.76 Aligned_cols=44 Identities=7% Similarity=0.042 Sum_probs=27.6
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC-CCHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA-PDPVE 290 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A-~DP~~ 290 (434)
+-|..|++-. +..+-+.--+.|. +.|||.+.|--|-|.. .++.+
T Consensus 73 ~pviaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~~s~~~ 117 (294)
T 3b4u_A 73 SRIVTGVLVD----SIEDAADQSAEAL-NAGARNILLAPPSYFKNVSDDG 117 (294)
T ss_dssp GGEEEEECCS----SHHHHHHHHHHHH-HTTCSEEEECCCCSSCSCCHHH
T ss_pred CcEEEeCCCc----cHHHHHHHHHHHH-hcCCCEEEEcCCcCCCCCCHHH
Confidence 3455677632 2212223344555 7899999999999988 66543
No 191
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=24.48 E-value=88 Score=30.32 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=28.4
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeee
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFl 401 (434)
+.+++|..+++-+.+-.+. |.+++.|-+-..-.++.++++++|..+.+
T Consensus 104 vpiSIDT~~~~Va~aAl~a----------Ga~iINdVsg~~d~~m~~v~a~~~~~vVl 151 (294)
T 2dqw_A 104 VPVSVDTRKPEVAEEALKL----------GAHLLNDVTGLRDERMVALAARHGVAAVV 151 (294)
T ss_dssp SCEEEECSCHHHHHHHHHH----------TCSEEECSSCSCCHHHHHHHHHHTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHh----------CCCEEEECCCCCChHHHHHHHHhCCCEEE
Confidence 5567888888777776654 56666663211222344455667766665
No 192
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=24.33 E-value=22 Score=32.41 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=23.0
Q ss_pred CHHHHHHHc---CCCEEEeCCcccCCCCHHHHHHH
Q psy4093 263 GPTDVITLR---GADLGVVGRGITQAPDPVEAARR 294 (434)
Q Consensus 263 TP~~Ai~~~---GAD~IVVGR~It~A~DP~~aa~~ 294 (434)
+..+++ +. |+|.++|||+++.+++..+.+.+
T Consensus 207 d~~~~~-~~~~~Gad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 207 DLRAIA-TLTHRGVEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp HHHHHH-TTGGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred HHHHHH-hhccCCCCEEEEcHHHHCCCcCHHHHHH
Confidence 345556 67 99999999999998866554443
No 193
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=23.88 E-value=53 Score=31.70 Aligned_cols=100 Identities=11% Similarity=0.077 Sum_probs=52.3
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+-|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++. +.-+|.+.+....+.-..-|-
T Consensus 85 vpviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~s~~---------~l~~~f~~va~a~~lPiilYn~P 150 (304)
T 3l21_A 85 ARVIAGAGTY----DTAHSIRLAKACA-AEGAHGLLVVTPYYSKPPQR---------GLQAHFTAVADATELPMLLYDIP 150 (304)
T ss_dssp SEEEEECCCS----CHHHHHHHHHHHH-HHTCSEEEEECCCSSCCCHH---------HHHHHHHHHHTSCSSCEEEEECH
T ss_pred CeEEEeCCCC----CHHHHHHHHHHHH-HcCCCEEEECCCCCCCCCHH---------HHHHHHHHHHHhcCCCEEEEeCc
Confidence 4566677632 2222233445666 89999999999999887653 344556666533333333343
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHH
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLT 360 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la 360 (434)
.| +..+++-.++.-+. +-+| |+++ |- .|.....++.
T Consensus 151 ~~---tg~~l~~~~~~~La-~~pn-IvgiKdssgd~~~~~~~~ 188 (304)
T 3l21_A 151 GR---SAVPIEPDTIRALA-SHPN-IVGVXDAKADLHSGAQIM 188 (304)
T ss_dssp HH---HSSCCCHHHHHHHH-TSTT-EEEEEECSCCHHHHHHHH
T ss_pred cc---cCCCCCHHHHHHHh-cCCC-EEEEECCCCCHHHHHHHh
Confidence 22 22233322222222 3455 4555 32 2466666665
No 194
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=23.43 E-value=3.8e+02 Score=23.53 Aligned_cols=69 Identities=9% Similarity=0.042 Sum_probs=37.6
Q ss_pred EecCCCHHHHHHHHHHhCCceeEEeEceeeeecC------CHHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHHhhcC
Q psy4093 347 ALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDF------SEEVQKELTALAKQHEFLRSRNGWFSPILSSFSLRFRDD 419 (434)
Q Consensus 347 AlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~------g~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a~~~~ 419 (434)
.+++.+.++++++ ...|- -++.++.-.+++. ...-++.++++.+..+.+|+-+.-..+ ++++...++.|
T Consensus 123 ~~~~~t~~e~~~~-~~~G~--d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~-~~~~~~~~~~G 197 (223)
T 1y0e_A 123 MADIATVEEAKNA-ARLGF--DYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVIT-PDMYKRVMDLG 197 (223)
T ss_dssp EEECSSHHHHHHH-HHTTC--SEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCS-HHHHHHHHHTT
T ss_pred EecCCCHHHHHHH-HHcCC--CEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCC-HHHHHHHHHcC
Confidence 4566777777663 44443 2334432222211 122334455555556788888887766 56676666655
No 195
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=23.41 E-value=33 Score=33.44 Aligned_cols=23 Identities=22% Similarity=0.147 Sum_probs=17.8
Q ss_pred CHHHHHH--HcCCCEEEeCCcccCC
Q psy4093 263 GPTDVIT--LRGADLGVVGRGITQA 285 (434)
Q Consensus 263 TP~~Ai~--~~GAD~IVVGR~It~A 285 (434)
||++|.. ..|||.+.|||++..+
T Consensus 262 ~~~d~~k~l~~GAd~V~iG~~~l~~ 286 (349)
T 1p0k_A 262 DALDVAKAIALGASCTGMAGHFLKA 286 (349)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 5555541 5899999999999876
No 196
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=23.15 E-value=1.4e+02 Score=27.66 Aligned_cols=56 Identities=4% Similarity=-0.121 Sum_probs=31.7
Q ss_pred EecCCCHHHHHHHHHHh--CCceeEEeEceeee-------ecCCHHHHHHHHHHHhcCCCeeeec
Q psy4093 347 ALDVTQAKDLLTLTRQL--GPHIAVLKTHSDAV-------RDFSEEVQKELTALAKQHEFLRSRN 402 (434)
Q Consensus 347 AlD~~~~~~al~la~~l--gp~i~~lKvg~dl~-------~~~g~~~v~~L~~la~k~gf~iFlD 402 (434)
.++..+.+++.+-.+++ .+.+..+|+|.+.. ...+......+-++++++|..|++-
T Consensus 100 ~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 164 (327)
T 2dvt_A 100 ALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLH 164 (327)
T ss_dssp CCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEE
T ss_pred ecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEEC
Confidence 35655555333333332 34566669998763 1223334455556677899998874
No 197
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=22.84 E-value=3.3e+02 Score=25.98 Aligned_cols=115 Identities=11% Similarity=0.057 Sum_probs=57.0
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC--CCHHHHHHHHHHHHHHHHHHHHhhcccccccChh
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA--PDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A--~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~ 319 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|-=|-|.. .++.+ +-+|.+.+....+.-..-|-
T Consensus 84 ~pviaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~~~s~~~---------l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 84 RLLLAGSGCE----STQATVEMTVSMA-QVGADAAMVVTPCYYRGRMSSAA---------LIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp SEEEEECCCS----SHHHHHHHHHHHH-HTTCSEEEEECCCTTGGGCCHHH---------HHHHHHHHHHHCSSCEEEEE
T ss_pred CcEEEecCCC----CHHHHHHHHHHHH-HcCCCEEEEcCCCcCCCCCCHHH---------HHHHHHHHHhhcCCCEEEEe
Confidence 4555677632 2212233335566 8999999998898874 34443 33444444332222223333
Q ss_pred hhhhhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHh-CCceeEEeEce
Q psy4093 320 TRKADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQL-GPHIAVLKTHS 374 (434)
Q Consensus 320 ~r~~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~l-gp~i~~lKvg~ 374 (434)
--.. +..+++-.++.-+. +-+| |+++ |- .|.....++.+.. ++...+| .|.
T Consensus 150 ~P~~-tg~~l~~~~~~~La-~~pn-IvgiKdssgd~~~~~~~~~~~~~~~f~v~-~G~ 203 (307)
T 3s5o_A 150 VPAN-TGLDLPVDAVVTLS-QHPN-IVGMXDSGGDVTRIGLIVHKTRKQDFQVL-AGS 203 (307)
T ss_dssp CHHH-HSCCCCHHHHHHHH-TSTT-EEEEEECSCCHHHHHHHHHHTTTSSCEEE-ESS
T ss_pred CCcc-cCCCCCHHHHHHHh-cCCC-EEEEEcCCCCHHHHHHHHHhccCCCeEEE-eCc
Confidence 2111 22233322222222 3456 4566 33 2577777887776 4555544 443
No 198
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=22.83 E-value=3.1e+02 Score=25.48 Aligned_cols=105 Identities=10% Similarity=0.058 Sum_probs=0.0
Q ss_pred hcccCHHHHHHHHHHHhccccceEEEcccCCchhHHHHHHHhhhhCCCCceEEEE-EeCCCCCCChHHHHhhcchhhHHH
Q psy4093 114 LKLADIGAAVGHQFRLIGEWAHLVTVHSIAGPGPLQEIQRISDELGEDRGVFLIA-QLSCQGNLIDEKYTQVGFKAITLE 192 (434)
Q Consensus 114 lKl~DI~nTv~~~~~~~~~~~d~vTvH~~~G~~ml~~a~~~~~~~~~~~~v~~v~-~lss~~sl~~~~~~~~g~~~~~~~ 192 (434)
+...|.-..+..+-..+..++..+-+ .+-.+..++...+..++.+ .-+++.. +++.
T Consensus 40 ir~~~~~~a~~~a~al~~gGi~~iEv-t~~t~~a~e~I~~l~~~~~--~~~iGaGTVlt~-------------------- 96 (232)
T 4e38_A 40 IAIDNAEDIIPLGKVLAENGLPAAEI-TFRSDAAVEAIRLLRQAQP--EMLIGAGTILNG-------------------- 96 (232)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEE-ETTSTTHHHHHHHHHHHCT--TCEEEEECCCSH--------------------
T ss_pred EEcCCHHHHHHHHHHHHHCCCCEEEE-eCCCCCHHHHHHHHHHhCC--CCEEeECCcCCH--------------------
Q ss_pred HHhhhccCCCCCCCCchHHHHHHHHhhcCCCCceEEeCccchh---hcCCCceEecCcccccCCCCCCCCccCCHHH---
Q psy4093 193 LKKYLCNNQVLPKCDNDVQETLKLAQSFPGLIAGLVCQAPSVL---ASNPGLLQLTPGIHLNQTGDNKGQQYNGPTD--- 266 (434)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~v~~lA~~a~~gv~GvVcs~~e~~---~~~~~~l~vtPGIr~~~~~~~~~dQ~~TP~~--- 266 (434)
.-++.|..+ |.+++|++..... .+...=+.+.||+. ||+|
T Consensus 97 -------------------~~a~~Ai~A--GA~fIvsP~~~~~vi~~~~~~gi~~ipGv~-------------TptEi~~ 142 (232)
T 4e38_A 97 -------------------EQALAAKEA--GATFVVSPGFNPNTVRACQEIGIDIVPGVN-------------NPSTVEA 142 (232)
T ss_dssp -------------------HHHHHHHHH--TCSEEECSSCCHHHHHHHHHHTCEEECEEC-------------SHHHHHH
T ss_pred -------------------HHHHHHHHc--CCCEEEeCCCCHHHHHHHHHcCCCEEcCCC-------------CHHHHHH
Q ss_pred HHHHcCCCEE
Q psy4093 267 VITLRGADLG 276 (434)
Q Consensus 267 Ai~~~GAD~I 276 (434)
|. +.|+|++
T Consensus 143 A~-~~Gad~v 151 (232)
T 4e38_A 143 AL-EMGLTTL 151 (232)
T ss_dssp HH-HTTCCEE
T ss_pred HH-HcCCCEE
No 199
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=22.64 E-value=1.8e+02 Score=27.56 Aligned_cols=114 Identities=13% Similarity=0.076 Sum_probs=57.1
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChh--
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFE-- 319 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~-- 319 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+.. +|.+.+....+.=..-|-
T Consensus 70 ~pviaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~l~---------~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 70 VPVIAGAGSN----STAEAIAFVRHAQ-NAGADGVLIVSPYYNKPTQEGIY---------QHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp SCBEEECCCS----SHHHHHHHHHHHH-HTTCSEEEEECCCSSCCCHHHHH---------HHHHHHHHHCSSCEEEEECH
T ss_pred CcEEEecCCc----cHHHHHHHHHHHH-HcCCCEEEEcCCCCCCCCHHHHH---------HHHHHHHHhCCCCEEEEeCc
Confidence 3455676632 2212233345556 79999999999999887664433 344444322222122222
Q ss_pred hhhhhccchhhHHH-HHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEEeEcee
Q psy4093 320 TRKADVKCRISSTL-LDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVLKTHSD 375 (434)
Q Consensus 320 ~r~~~~~~~~~~~l-~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~lKvg~d 375 (434)
.|. ..+++-.+ .++. +..+| |+++ |- .|.....++.+..++.+.++ .|.|
T Consensus 136 ~~t---g~~l~~~~~~~La-~~~pn-IvgiK~s~gd~~~~~~~~~~~~~~f~v~-~G~d 188 (292)
T 2vc6_A 136 GRS---AIEIHVETLARIF-EDCPN-VKGVXDATGNLLRPSLERMACGEDFNLL-TGED 188 (292)
T ss_dssp HHH---SCCCCHHHHHHHH-HHCTT-EEEEEECSCCTHHHHHHHHHSCTTSEEE-ESCG
T ss_pred ccc---CcCCCHHHHHHHH-hhCCC-EEEEecCCCCHHHHHHHHHHcCCCEEEE-ECch
Confidence 221 22222222 2232 21355 4455 32 24667777777777666555 4433
No 200
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=22.55 E-value=1.4e+02 Score=29.12 Aligned_cols=49 Identities=8% Similarity=0.071 Sum_probs=31.9
Q ss_pred cEEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCC-HHHHHHHHHHHhcCCCeeee
Q psy4093 343 NLCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFS-EEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 343 ~LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g-~~~v~~L~~la~k~gf~iFl 401 (434)
.+.+++|..+++-+.+-++. |.+++.|-. ...-.++.++++++|..+.+
T Consensus 85 ~vpiSIDT~~~~Va~aAl~a----------Ga~iINDVsg~~~d~~m~~v~a~~~~~vvl 134 (314)
T 2vef_A 85 DVLISIDTWKSQVAEAALAA----------GADLVNDITGLMGDEKMPHVVAEARAQVVI 134 (314)
T ss_dssp CCEEEEECSCHHHHHHHHHT----------TCCEEEETTTTCSCTTHHHHHHHHTCEEEE
T ss_pred CceEEEeCCCHHHHHHHHHc----------CCCEEEECCCCCCChHHHHHHHHcCCCEEE
Confidence 46788999999998887663 667877643 11112334455678877666
No 201
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=22.49 E-value=65 Score=31.53 Aligned_cols=44 Identities=18% Similarity=0.057 Sum_probs=28.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~ 290 (434)
+-|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+
T Consensus 104 vpViaGvg~~----st~eai~la~~A~-~~Gadavlv~~P~Y~~~s~~~ 147 (332)
T 2r8w_A 104 RTLMAGIGAL----RTDEAVALAKDAE-AAGADALLLAPVSYTPLTQEE 147 (332)
T ss_dssp SEEEEEECCS----SHHHHHHHHHHHH-HHTCSEEEECCCCSSCCCHHH
T ss_pred CcEEEecCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHH
Confidence 4566677732 2212233345566 789999999999998877643
No 202
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=22.43 E-value=2.1e+02 Score=26.08 Aligned_cols=56 Identities=20% Similarity=0.183 Sum_probs=39.8
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCCHHHHHHHHHHHhcCCCeeee
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFSEEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g~~~v~~L~~la~k~gf~iFl 401 (434)
|||++-.++.+++++.++..+ .-++=+-+|++.+...+.+.++.+..++.+.+|..
T Consensus 3 icv~l~~~~~~~~~~~~~~~~--~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~PiI~ 58 (219)
T 2egz_A 3 IAVPLDDTNFSENLKKAKEKG--ADIVELRVDQFSDTSLNYVKEKLEEVHSQGLKTIL 58 (219)
T ss_dssp EEEEECSTTHHHHHHHHHHHT--CSEEEEEGGGCSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHcC--CCEEEEEeccccccCHHHHHHHHHHHHhcCCcEEE
Confidence 899999999999999998875 35666777788777666555544333444666654
No 203
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.22 E-value=90 Score=29.91 Aligned_cols=111 Identities=11% Similarity=0.112 Sum_probs=57.4
Q ss_pred EecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHHHHHHHHHHHHHHhhcccccccChhhhh
Q psy4093 243 QLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRYKEVMWEAYEQRLKKENSRIVTPFETRK 322 (434)
Q Consensus 243 ~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i~~~~~~a~~~~~~~~~~~~~~~~~~r~ 322 (434)
-|..|++-. +..+.+.--+.|. +.|||.+.|--|-|...++.+.. +|.+.+....+.-..-|.-=.
T Consensus 75 pviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~~~~~l~---------~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 75 PVVAGVAST----SVADAVAQAKLYE-KLGADGILAILEAYFPLKDAQIE---------SYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp CBEEEEEES----SHHHHHHHHHHHH-HHTCSEEEEEECCSSCCCHHHHH---------HHHHHHHHHCSSCEEEEECTT
T ss_pred cEEEeCCCC----CHHHHHHHHHHHH-HcCCCEEEEcCCCCCCCCHHHHH---------HHHHHHHHHCCCCEEEEECcc
Confidence 455577732 2222233345666 89999999999999887765433 344444322222222232100
Q ss_pred hhccchhhHHHHHHhhhcCCcEEEEe-cC-CCHHHHHHHHHHhCCceeEE
Q psy4093 323 ADVKCRISSTLLDIMVKKKSNLCVAL-DV-TQAKDLLTLTRQLGPHIAVL 370 (434)
Q Consensus 323 ~~~~~~~~~~l~~~m~~k~s~LivAl-D~-~~~~~al~la~~lgp~i~~l 370 (434)
.+..+++-.++.-+. +-+|+ +++ |- .|.....++.+..++.+.++
T Consensus 141 -~tg~~l~~~~~~~La-~~pnI-vgiKdssgd~~~~~~~~~~~~~~f~v~ 187 (300)
T 3eb2_A 141 -FQRSDLTLDVIARLA-EHPRI-RYIKDASTNTGRLLSIINRCGDALQVF 187 (300)
T ss_dssp -TCSSCCCHHHHHHHH-TSTTE-EEEEECSSBHHHHHHHHHHHGGGSEEE
T ss_pred -ccCCCCCHHHHHHHH-cCCCE-EEEEcCCCCHHHHHHHHHHcCCCeEEE
Confidence 022223322222222 34564 556 33 24677888888777665544
No 204
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=21.79 E-value=32 Score=31.44 Aligned_cols=24 Identities=33% Similarity=0.466 Sum_probs=21.5
Q ss_pred C-CCEEEeCCcccCCCCHHHHHHHH
Q psy4093 272 G-ADLGVVGRGITQAPDPVEAARRY 295 (434)
Q Consensus 272 G-AD~IVVGR~It~A~DP~~aa~~i 295 (434)
| +|-++|||.|+.++.+.+.+.++
T Consensus 215 G~adgv~vgsal~~~~~~~~~~~~~ 239 (241)
T 1qo2_A 215 GLLKGVIVGRAFLEGILTVEVMKRY 239 (241)
T ss_dssp TSEEEEEECHHHHTTSSCHHHHHHH
T ss_pred CeEeEEEeeHHHHcCCCCHHHHHHH
Confidence 9 99999999999999988877665
No 205
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=21.75 E-value=68 Score=31.04 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=30.5
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHHHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEAARRY 295 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~aa~~i 295 (434)
+.|..|++. +..+.+.--+.|. +.|||.+.|--|-|...++.+..+-|
T Consensus 82 vpViaGvg~-----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~l~~~f 129 (316)
T 3e96_A 82 ALVVAGIGY-----ATSTAIELGNAAK-AAGADAVMIHMPIHPYVTAGGVYAYF 129 (316)
T ss_dssp SEEEEEECS-----SHHHHHHHHHHHH-HHTCSEEEECCCCCSCCCHHHHHHHH
T ss_pred CcEEEEeCc-----CHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCCHHHHHHHH
Confidence 456677752 2222233445666 89999999999999877665443333
No 206
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=21.67 E-value=1.1e+02 Score=31.13 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=46.2
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCC-HHHHHHHHHHHhcCCCeeeecCCCCcchhHHHHH
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFS-EEVQKELTALAKQHEFLRSRNGWFSPILSSFSLR 415 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g-~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV~~a 415 (434)
+=+-||+.+.+|..+.++.+-|..+. +|+ .|++ ++..+-|.++.++.+.++|-| ||--|-.-+
T Consensus 108 ~pi~Ldv~~~dEfv~~v~~~~p~F~~--I~l---ED~~~p~~f~il~~~r~~~~ipvf~D----DiqGTa~V~ 171 (398)
T 2a9f_A 108 IPIVLDTKDTEEIISIVKALAPTFGG--INL---EDISAPRCFEIEQRLIKECHIPVFHD----DQHGTAIVV 171 (398)
T ss_dssp EEEECCCCCHHHHHHHHHHHGGGCSE--EEE---CSCCTTHHHHHHHHHHHHCSSCEEEH----HHHHHHHHH
T ss_pred eeeEeCCCCHHHHHHHHHHcCCceeE--ecc---ccCCChHHHHHHHHhhhcCCcceecc----hhhhHHHHH
Confidence 44558999999999999999999776 344 4663 556666666656678999997 887774443
No 207
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.37 E-value=56 Score=31.33 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=28.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVEA 291 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~a 291 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+.
T Consensus 70 vpviaGvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~s~~~l 114 (297)
T 2rfg_A 70 VPVIAGAGSN----NPVEAVRYAQHAQ-QAGADAVLCVAGYYNRPSQEGL 114 (297)
T ss_dssp SCBEEECCCS----SHHHHHHHHHHHH-HHTCSEEEECCCTTTCCCHHHH
T ss_pred CeEEEccCCC----CHHHHHHHHHHHH-hcCCCEEEEcCCCCCCCCHHHH
Confidence 3455677632 2212233345566 7899999999999987765433
No 208
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=21.19 E-value=4.6e+02 Score=26.69 Aligned_cols=39 Identities=31% Similarity=0.489 Sum_probs=30.1
Q ss_pred HHHHHHcCCCE-EEeCCcccCCCC-HHHHHHHHHHHHHHHHH
Q psy4093 265 TDVITLRGADL-GVVGRGITQAPD-PVEAARRYKEVMWEAYE 304 (434)
Q Consensus 265 ~~Ai~~~GAD~-IVVGR~It~A~D-P~~aa~~i~~~~~~a~~ 304 (434)
.+.+...|.|. +-.|.+|..-++ |.+-|+.+|+ +|+|..
T Consensus 357 p~l~~~~G~D~vl~~GGG~~gHP~G~aaGa~A~R~-A~eA~~ 397 (430)
T 2d69_A 357 PELIRLFGKDLVIQAGGGVMGHPDGPRAGAKALRD-AIDAAI 397 (430)
T ss_dssp HHHHHHHCSCCEEECHHHHHTCTTCHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHhCCcEEEEeCccccCCCCCcHHHHHHHHH-HHHHHH
Confidence 34454789885 449999999866 8888889987 999843
No 209
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=21.15 E-value=3.6e+02 Score=27.80 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=46.5
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceee--------eecCC---HHHHHHHHHHHhcCCCeeeecCCCCcchhHH
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDA--------VRDFS---EEVQKELTALAKQHEFLRSRNGWFSPILSSF 412 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl--------~~~~g---~~~v~~L~~la~k~gf~iFlDlKf~DIpnTV 412 (434)
.+++-++.+.+.+..+++. | +-++++|..- ...+| ...+.++.+.+++.+.+|+-|.=..+ |.-+
T Consensus 299 ~vi~g~v~t~e~a~~~~~a-G--ad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~-~~di 374 (511)
T 3usb_A 299 NIIAGNVATAEATKALIEA-G--ANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKY-SGDM 374 (511)
T ss_dssp EEEEEEECSHHHHHHHHHH-T--CSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCS-HHHH
T ss_pred eEEeeeeccHHHHHHHHHh-C--CCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCC-HHHH
Confidence 3556688999999998875 3 2344454321 11232 33455555556677899999988776 5566
Q ss_pred HHHhhcCcc
Q psy4093 413 SLRFRDDKT 421 (434)
Q Consensus 413 ~~a~~~~~~ 421 (434)
.+|+..|-.
T Consensus 375 ~kala~GA~ 383 (511)
T 3usb_A 375 VKALAAGAH 383 (511)
T ss_dssp HHHHHTTCS
T ss_pred HHHHHhCch
Confidence 777766533
No 210
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=21.14 E-value=2.5e+02 Score=24.81 Aligned_cols=21 Identities=24% Similarity=0.234 Sum_probs=16.8
Q ss_pred HHHHHHHcCCCEEEeCCcccCC
Q psy4093 264 PTDVITLRGADLGVVGRGITQA 285 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A 285 (434)
..+++ ++|||.+++|++....
T Consensus 92 ~~~~~-~~Gad~V~i~~~~~~~ 112 (253)
T 1h5y_A 92 ATTLF-RAGADKVSVNTAAVRN 112 (253)
T ss_dssp HHHHH-HHTCSEEEESHHHHHC
T ss_pred HHHHH-HcCCCEEEEChHHhhC
Confidence 36778 8999999999987643
No 211
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=21.10 E-value=1.7e+02 Score=28.18 Aligned_cols=47 Identities=9% Similarity=0.005 Sum_probs=31.1
Q ss_pred EEEEecCCCHHHHHHHHHHhCCceeEEeEceeeeecCC-HHHHHHHHHHHhcCCCeeee
Q psy4093 344 LCVALDVTQAKDLLTLTRQLGPHIAVLKTHSDAVRDFS-EEVQKELTALAKQHEFLRSR 401 (434)
Q Consensus 344 LivAlD~~~~~~al~la~~lgp~i~~lKvg~dl~~~~g-~~~v~~L~~la~k~gf~iFl 401 (434)
+.+++|..+++-+.+-++. |.+++.|-+ .. -.++.++++++|..+.+
T Consensus 98 vpiSIDT~~~~Va~aAl~a----------Ga~iINdVsg~~-d~~m~~~~a~~~~~vVl 145 (294)
T 2y5s_A 98 VPLSIDTYKPAVMRAALAA----------GADLINDIWGFR-QPGAIDAVRDGNSGLCA 145 (294)
T ss_dssp SCEEEECCCHHHHHHHHHH----------TCSEEEETTTTC-STTHHHHHSSSSCEEEE
T ss_pred CeEEEECCCHHHHHHHHHc----------CCCEEEECCCCC-chHHHHHHHHhCCCEEE
Confidence 4567888888888876664 567777643 22 33445566778877766
No 212
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=20.25 E-value=84 Score=29.82 Aligned_cols=42 Identities=10% Similarity=-0.118 Sum_probs=26.7
Q ss_pred ecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCC-CCHHH
Q psy4093 244 LTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQA-PDPVE 290 (434)
Q Consensus 244 vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A-~DP~~ 290 (434)
|..|++-. +..+-+.--+.|. +.|||.+.|--|-|.. .++.+
T Consensus 67 vi~Gvg~~----~t~~ai~la~~A~-~~Gadavlv~~P~y~~~~s~~~ 109 (286)
T 2r91_A 67 VIVQVASL----NADEAIALAKYAE-SRGAEAVASLPPYYFPRLSERQ 109 (286)
T ss_dssp EEEECCCS----SHHHHHHHHHHHH-HTTCSEEEECCSCSSTTCCHHH
T ss_pred EEEeeCCC----CHHHHHHHHHHHH-hcCCCEEEEcCCcCCCCCCHHH
Confidence 55676632 2212233345556 7999999999999987 66544
No 213
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=20.08 E-value=30 Score=34.11 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=22.2
Q ss_pred HHHHHHHcCCCEEEeCCcccCCCCHHH
Q psy4093 264 PTDVITLRGADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 264 P~~Ai~~~GAD~IVVGR~It~A~DP~~ 290 (434)
..+++ +.|||.+.|||++..++++..
T Consensus 223 ~~~~l-~~GAd~V~vGs~~~~~~e~~~ 248 (369)
T 3bw2_A 223 IAAVL-AAGADAAQLGTAFLATDESGA 248 (369)
T ss_dssp HHHHH-HTTCSEEEESHHHHTSTTCCC
T ss_pred HHHHH-HcCCCEEEEChHHhCCcccCc
Confidence 45678 899999999999999988753
No 214
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=20.06 E-value=61 Score=30.87 Aligned_cols=44 Identities=16% Similarity=0.005 Sum_probs=28.2
Q ss_pred eEecCcccccCCCCCCCCccCCHHHHHHHcCCCEEEeCCcccCCCCHHH
Q psy4093 242 LQLTPGIHLNQTGDNKGQQYNGPTDVITLRGADLGVVGRGITQAPDPVE 290 (434)
Q Consensus 242 l~vtPGIr~~~~~~~~~dQ~~TP~~Ai~~~GAD~IVVGR~It~A~DP~~ 290 (434)
+.|..|++-. +..+-+.--+.|. +.|||.+.|--|-|...++.+
T Consensus 70 ~pviaGvg~~----~t~~ai~la~~a~-~~Gadavlv~~P~y~~~s~~~ 113 (289)
T 2yxg_A 70 VQVIAGAGSN----CTEEAIELSVFAE-DVGADAVLSITPYYNKPTQEG 113 (289)
T ss_dssp SEEEEECCCS----SHHHHHHHHHHHH-HHTCSEEEEECCCSSCCCHHH
T ss_pred CcEEEeCCCC----CHHHHHHHHHHHH-hcCCCEEEECCCCCCCCCHHH
Confidence 4566777732 2212233345566 789999999999998776643
Done!