BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4094
(663 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328778015|ref|XP_001122603.2| PREDICTED: hypothetical protein LOC726887 [Apis mellifera]
Length = 637
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 163/224 (72%), Positives = 192/224 (85%), Gaps = 3/224 (1%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
SS+ SP + + +KRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL
Sbjct: 416 SSQNNSPNAGLGEKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 475
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+K
Sbjct: 476 NWDPHTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSK 535
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+PIPCVLLANKCDQ KEG+ N+PAK+DE+ KE NF+GWFETSAK+NINI++AA+
Sbjct: 536 VQLPDGSPIPCVLLANKCDQQKEGLVNSPAKMDEYCKEKNFAGWFETSAKENINIEEAAR 595
Query: 621 TLVQKILENDKV-QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LV KIL+ND++ + NG T F+LN++ +K ++C+C
Sbjct: 596 FLVNKILQNDQLMKGNGSQDQTDGERFALNQSPNSSK--KSCSC 637
>gi|340726280|ref|XP_003401488.1| PREDICTED: hypothetical protein LOC100644037 [Bombus terrestris]
Length = 678
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 190/224 (84%), Gaps = 3/224 (1%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
SS+ +P + + DKRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL
Sbjct: 457 SSQNNAPNAGLGDKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 516
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+K
Sbjct: 517 NWDPHTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSK 576
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+ IPCVLLANKCDQ KEG+ N+PAK+DE+ KE NF+GWFETSAK+NINI++AA+
Sbjct: 577 VQLPDGSQIPCVLLANKCDQQKEGLVNSPAKMDEYCKEKNFAGWFETSAKENINIEEAAR 636
Query: 621 TLVQKILENDK-VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LV KIL+ND+ ++ NG T F+LN+ +K ++C+C
Sbjct: 637 FLVNKILQNDQMMKGNGSQDQTDGERFALNQTPTSSK--KSCSC 678
>gi|350405324|ref|XP_003487400.1| PREDICTED: hypothetical protein LOC100750072 [Bombus impatiens]
Length = 678
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 190/224 (84%), Gaps = 3/224 (1%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
SS+ +P + + DKRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL
Sbjct: 457 SSQNNAPNAGLGDKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 516
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+K
Sbjct: 517 NWDPHTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSK 576
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+ IPCVLLANKCDQ KEG+ N+PAK+DE+ KE NF+GWFETSAK+NINI++AA+
Sbjct: 577 VQLPDGSQIPCVLLANKCDQQKEGLVNSPAKMDEYCKEKNFAGWFETSAKENINIEEAAR 636
Query: 621 TLVQKILENDK-VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LV KIL+ND+ ++ NG T F+LN+ +K ++C+C
Sbjct: 637 FLVNKILQNDQMMKGNGSQDQTDGERFALNQTPTSSK--KSCSC 678
>gi|307182735|gb|EFN69859.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 658
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/254 (68%), Positives = 201/254 (79%), Gaps = 11/254 (4%)
Query: 411 SPNSSSNGEKETAASPNTSVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAG 470
S N+ N K AA VA ++S +N S+ V +KRE LYKILVIGELGAG
Sbjct: 415 SYNNMDNLSKSHAAM--VGAVADQSSSSNASNLGVD------EKREHLYKILVIGELGAG 466
Query: 471 KTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYK 530
KTSIIKRYVHQFFS HYRATIGVDFALKVL+WD TIIRLQLWDIAGQERFGNMTRVYYK
Sbjct: 467 KTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQLWDIAGQERFGNMTRVYYK 526
Query: 531 EAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPA 590
EAVGAFIVFDVTR+AT DAV+KWKQDLD+KV LPDG+PIPCVLLANKCDQ KEG+ N+PA
Sbjct: 527 EAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQLPDGSPIPCVLLANKCDQQKEGLVNSPA 586
Query: 591 KIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV-QANGDSHATSEAVFSLN 649
K+DE+ KE NFSGWFETSAK+NINI++AAK LV KIL+ND+V + NG T F+L+
Sbjct: 587 KMDEYCKEKNFSGWFETSAKENINIEEAAKFLVNKILQNDQVMKGNGSQDQTDGERFALS 646
Query: 650 RNSQETKNGRNCAC 663
++ +K ++C C
Sbjct: 647 QSPTSSK--KSCGC 658
>gi|383866195|ref|XP_003708556.1| PREDICTED: uncharacterized protein LOC100874872 [Megachile
rotundata]
Length = 665
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 184/211 (87%), Gaps = 1/211 (0%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
SS+ +P + + +KRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL
Sbjct: 444 SSQNNAPNAGVGEKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVL 503
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+K
Sbjct: 504 NWDPHTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSK 563
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+PIPCVLLANKCDQ KEG+ N+PAK+DE+ KE NF+GWFETSAK+NINI++AA+
Sbjct: 564 VQLPDGSPIPCVLLANKCDQQKEGLVNSPAKMDEYCKEKNFAGWFETSAKENINIEEAAR 623
Query: 621 TLVQKILENDKV-QANGDSHATSEAVFSLNR 650
LV KIL+ND++ + NG T F+LN+
Sbjct: 624 FLVNKILQNDQLMKGNGSQDQTDGERFALNQ 654
>gi|307202148|gb|EFN81648.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 657
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/212 (75%), Positives = 183/212 (86%), Gaps = 3/212 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL+WD TIIRLQL
Sbjct: 448 EKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQL 507
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+KV LPDG+PIPCV
Sbjct: 508 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQLPDGSPIPCV 567
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK- 631
LLANKCDQ KEG+ N+P K+DE+ KE NFSGWFETSAK+NINI++AA+ LV KIL+ND+
Sbjct: 568 LLANKCDQHKEGLVNSPNKMDEYCKEKNFSGWFETSAKENINIEEAARFLVNKILQNDQL 627
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
++ NG T F+LN++ K ++CAC
Sbjct: 628 LKGNGSQDQTDGERFTLNQSPTSAK--KSCAC 657
>gi|157114529|ref|XP_001652315.1| rab32 [Aedes aegypti]
gi|157114533|ref|XP_001652317.1| rab32 [Aedes aegypti]
gi|108877258|gb|EAT41483.1| AAEL006880-PB [Aedes aegypti]
gi|108877260|gb|EAT41485.1| AAEL006880-PA [Aedes aegypti]
Length = 294
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/298 (57%), Positives = 216/298 (72%), Gaps = 12/298 (4%)
Query: 367 LPSAAAAASDVKSPSDLKKEILSITTPIVTEAGRKKHNEPKPFTSPNSSSNGEKETAASP 426
+ S+ A+ ++ + SDL+ ++ S+ + ++ R++ + + + K A S
Sbjct: 8 VVSSVASRTNGGATSDLELDLGSVKSADISGTLRRRSSILRGWI---------KRGAESR 58
Query: 427 NTSVVAGKTSITNGSSKEVSPYSKMP-DKREFLYKILVIGELGAGKTSIIKRYVHQFFSP 485
SV + + G + S S P +KRE LYKILVIGELG GKTS IKRYVHQFFS
Sbjct: 59 GGSVTHQRQHLQQGRTMTKSNMSTAPTEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQ 118
Query: 486 HYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAA 545
+YRATIGVDFALKVL+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR A
Sbjct: 119 NYRATIGVDFALKVLNWDQNTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRNA 178
Query: 546 TFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWF 605
TF+AV+KWKQDLD+KV LP+G PIPC+LLANK DQPK+GI PAK+DE++KEH F+GWF
Sbjct: 179 TFEAVIKWKQDLDSKVQLPNGKPIPCILLANKSDQPKQGIVTTPAKLDEYVKEHGFAGWF 238
Query: 606 ETSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
ETSAK+N+NI++AAK+LV KIL NDK Q N S+ F+L S+++ +NCAC
Sbjct: 239 ETSAKENVNIEEAAKSLVNKILMNDK-QTNAGEIVDSDR-FALAGGSKDSHQKKNCAC 294
>gi|332027672|gb|EGI67740.1| Ras-related protein Rab-32 [Acromyrmex echinatior]
Length = 287
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 161/212 (75%), Positives = 184/212 (86%), Gaps = 3/212 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIGVDFALKVL+WD TIIRLQL
Sbjct: 78 EKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDPHTIIRLQL 137
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+KV LPDG+ IPCV
Sbjct: 138 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSKVQLPDGSSIPCV 197
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ KEG+ N+PAK+DE+ KE NFSGWFETSAK+NINI++AAK LV KIL+ND+V
Sbjct: 198 LLANKCDQQKEGLINSPAKMDEYCKEKNFSGWFETSAKENINIEEAAKFLVNKILQNDQV 257
Query: 633 -QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ NG T F+LN++ +K ++C+C
Sbjct: 258 IRDNGVQDQTDNERFTLNQSPTSSK--KSCSC 287
>gi|357608836|gb|EHJ66182.1| Rab-related protein [Danaus plexippus]
Length = 629
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 155/227 (68%), Positives = 182/227 (80%), Gaps = 3/227 (1%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
GS E S + ++RE LYKILVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKV
Sbjct: 403 GSDDEPSHATASAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKV 462
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDV+R ATFDAV+KWK DLD
Sbjct: 463 LNWDANTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDT 522
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LPDG+PIPC+LLANKCDQ KEGI N+P K++E+ +E F+GWFETSAK+NINI++AA
Sbjct: 523 KVQLPDGSPIPCILLANKCDQQKEGIVNSPGKMEEYCREKGFAGWFETSAKENINIEEAA 582
Query: 620 KTLVQKILENDKVQANGDSHATSEAV---FSLNRNSQETKNGRNCAC 663
++LV KIL NDK+ + D A+ + NS+ + ++CAC
Sbjct: 583 RSLVNKILLNDKLLQSSDKDGERFALDHKIANGENSRAAGSSKSCAC 629
>gi|157114531|ref|XP_001652316.1| rab32 [Aedes aegypti]
gi|403182835|gb|EJY57660.1| AAEL006880-PC [Aedes aegypti]
Length = 232
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/223 (71%), Positives = 184/223 (82%), Gaps = 3/223 (1%)
Query: 442 SKEVSPYSKMP-DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
S +S S P +KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL
Sbjct: 12 SDNLSNMSTAPTEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVL 71
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+WD TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR ATF+AV+KWKQDLD+K
Sbjct: 72 NWDQNTIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRNATFEAVIKWKQDLDSK 131
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LP+G PIPC+LLANK DQPK+GI PAK+DE++KEH F+GWFETSAK+N+NI++AAK
Sbjct: 132 VQLPNGKPIPCILLANKSDQPKQGIVTTPAKLDEYVKEHGFAGWFETSAKENVNIEEAAK 191
Query: 621 TLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+LV KIL NDK Q N S+ F+L S+++ +NCAC
Sbjct: 192 SLVNKILMNDK-QTNAGEIVDSDR-FALAGGSKDSHQKKNCAC 232
>gi|321466231|gb|EFX77228.1| hypothetical protein DAPPUDRAFT_305892 [Daphnia pulex]
Length = 668
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 146/178 (82%), Positives = 161/178 (90%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K E LYK+LVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKV+ WD T+IRLQLW
Sbjct: 460 KNEHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVVHWDQSTVIRLQLW 519
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAFIVFDVTR++TF++V KWKQDLD KV LPDG+PIPCVL
Sbjct: 520 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRSSTFESVAKWKQDLDTKVQLPDGSPIPCVL 579
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LANKCDQPKEGIA +PAK+DE+ +E F+GWFETSAKDNINIDDAAK LV IL+ND+
Sbjct: 580 LANKCDQPKEGIAASPAKMDEYCREKGFAGWFETSAKDNINIDDAAKFLVGTILQNDQ 637
>gi|242005923|ref|XP_002423809.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507025|gb|EEB11071.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 218
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 179/210 (85%), Gaps = 2/210 (0%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE LYKILV+GELG GKTSIIKRYVHQFFS HYRATIGVDFALKVL+WD TIIRLQLW
Sbjct: 11 QREHLYKILVVGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLW 70
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ATFDAV+KWK+DLD+KV L DG+PIPC+L
Sbjct: 71 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATFDAVVKWKEDLDSKVQLSDGSPIPCIL 130
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCDQPKEG+ NN K+DE+ KE FS W+ETSAK+NINI++A+++LV KIL+NDK+
Sbjct: 131 LANKCDQPKEGLVNNKNKMDEYCKEKGFSTWYETSAKENINIEEASRSLVNKILQNDKMM 190
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+GD + F L+ S E NG++C C
Sbjct: 191 ESGDQSKDMDK-FVLDWRS-EKGNGKSCWC 218
>gi|195154130|ref|XP_002017975.1| GL17459 [Drosophila persimilis]
gi|194113771|gb|EDW35814.1| GL17459 [Drosophila persimilis]
Length = 931
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 177/219 (80%), Gaps = 17/219 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 722 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDGNTIVRLQL 781
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 782 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 841
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI NP K+DE+++E+ F+GWFETSAK+NINID+A++ LV KIL NDK+
Sbjct: 842 LLANKCDQEKQGIITNPEKMDEYVRENGFAGWFETSAKENINIDEASRALVNKILINDKL 901
Query: 633 ----QANGDSHATSEAVFSLNRNSQ----ETKNGRNCAC 663
A+GD F+LN S ETKN C+C
Sbjct: 902 ITGDLADGDK-------FNLNSTSDATGTETKN--KCSC 931
>gi|198460156|ref|XP_001361630.2| GA20772 [Drosophila pseudoobscura pseudoobscura]
gi|198136921|gb|EAL26209.2| GA20772 [Drosophila pseudoobscura pseudoobscura]
Length = 936
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 177/219 (80%), Gaps = 17/219 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 727 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDGNTIVRLQL 786
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 787 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 846
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI NP K+DE+++E+ F+GWFETSAK+NINID+A++ LV KIL NDK+
Sbjct: 847 LLANKCDQEKQGIITNPEKMDEYVRENGFAGWFETSAKENINIDEASRALVNKILINDKL 906
Query: 633 ----QANGDSHATSEAVFSLNRNSQ----ETKNGRNCAC 663
A+GD F+LN S ETKN C+C
Sbjct: 907 ITGDLADGDK-------FNLNSTSDATGTETKN--KCSC 936
>gi|17933630|ref|NP_525109.1| lightoid, isoform B [Drosophila melanogaster]
gi|7303926|gb|AAF58970.1| lightoid, isoform B [Drosophila melanogaster]
Length = 686
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 174/216 (80%), Gaps = 12/216 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 478 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 537
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 538 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 597
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 598 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 657
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRN-CAC 663
A+GD F+L+ + +N C+C
Sbjct: 658 ISADLADGDK-------FNLSAADATGSDAKNKCSC 686
>gi|118777684|ref|XP_308216.2| AGAP007654-PA [Anopheles gambiae str. PEST]
gi|116132020|gb|EAA04140.2| AGAP007654-PA [Anopheles gambiae str. PEST]
Length = 215
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL+WD TIIRLQ
Sbjct: 6 AEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIRLQ 65
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ATFDAV+KWK DLD+KV LPDG PIPC
Sbjct: 66 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATFDAVIKWKNDLDSKVQLPDGKPIPC 125
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
+LLANK DQ K+GI PAK+DE++KEH F+GWFETSAK+N+NI++AAK+LV KIL NDK
Sbjct: 126 ILLANKSDQQKQGIVTTPAKLDEYVKEHGFAGWFETSAKENVNIEEAAKSLVNKILMNDK 185
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ G+ F+L +T ++C+C
Sbjct: 186 LLNTGE--VIDSERFALVGGKSDTSQKKSCSC 215
>gi|170053912|ref|XP_001862890.1| rab32 [Culex quinquefasciatus]
gi|167874360|gb|EDS37743.1| rab32 [Culex quinquefasciatus]
Length = 215
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 153/211 (72%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL+WD TIIRLQL
Sbjct: 7 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIRLQL 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ATFDAV+KWKQDLD+KV LPDG PIPC+
Sbjct: 67 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATFDAVIKWKQDLDSKVQLPDGKPIPCI 126
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANK DQ K+GI PAK+DE++KEH F+GWFETSAK+N+NI++AAK+LV KIL NDK
Sbjct: 127 LLANKSDQQKQGIVTTPAKLDEYVKEHGFAGWFETSAKENVNIEEAAKSLVNKILTNDKQ 186
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
G+ T F+L + ++CAC
Sbjct: 187 INAGELMDTDR--FALAGGKTDPTQKKSCAC 215
>gi|303274120|gb|ADM07446.1| Rab32 [Helicoverpa armigera]
Length = 231
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 183/216 (84%), Gaps = 7/216 (3%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++RE LYKILVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKVL+WD TIIRLQL
Sbjct: 18 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQL 77
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDV+R ATFDAV+KWK DLDAKV LPDG+PIPC+
Sbjct: 78 WDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSPIPCI 137
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ KEGI N+ AK++E+ +E F+GWFETSAK+NINI++AA++LV KIL NDK+
Sbjct: 138 LLANKCDQQKEGIVNSQAKMEEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKL 197
Query: 633 QANGDSHATSEAVFSLNR---NSQETKNG--RNCAC 663
+ D+ + F+L+ N + +++G ++C+C
Sbjct: 198 LQSNDNRDGDK--FALDHKIANGENSRDGTTKSCSC 231
>gi|195474974|ref|XP_002089761.1| GE22467 [Drosophila yakuba]
gi|194175862|gb|EDW89473.1| GE22467 [Drosophila yakuba]
Length = 560
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 174/216 (80%), Gaps = 12/216 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 352 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 411
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 412 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 471
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 472 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 531
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRN-CAC 663
A+GD F+L+ + +N C+C
Sbjct: 532 ISADLADGDK-------FNLSTGDATGADAKNKCSC 560
>gi|195119442|ref|XP_002004240.1| GI19816 [Drosophila mojavensis]
gi|193909308|gb|EDW08175.1| GI19816 [Drosophila mojavensis]
Length = 665
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 173/211 (81%), Gaps = 3/211 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 458 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDANTIVRLQL 517
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 518 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 577
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P ++DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 578 LLANKCDQEKQGIVTQPERMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 637
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D++ + S S ETKN C+C
Sbjct: 638 -ITADANDAEKFNLSAADASAETKN--KCSC 665
>gi|45551040|ref|NP_724768.2| lightoid, isoform A [Drosophila melanogaster]
gi|45445639|gb|AAG22295.2| lightoid, isoform A [Drosophila melanogaster]
Length = 385
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 177 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 236
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 237 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 296
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 297 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 356
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 357 ISADLADGDKFNLSAA----DATGSDAKN--KCSC 385
>gi|195581818|ref|XP_002080727.1| GD10095 [Drosophila simulans]
gi|194192736|gb|EDX06312.1| GD10095 [Drosophila simulans]
Length = 382
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 174 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 233
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 234 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 293
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 294 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 353
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 354 ISADLADGDKFNLSTA----DATGSDAKN--KCSC 382
>gi|312377455|gb|EFR24284.1| hypothetical protein AND_11247 [Anopheles darlingi]
Length = 218
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 175/212 (82%), Gaps = 1/212 (0%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL+WD TIIRLQL
Sbjct: 7 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLNWDQNTIIRLQL 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ATFDAV+KWKQDLD+KV LPDG PIPC+
Sbjct: 67 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSATFDAVIKWKQDLDSKVQLPDGKPIPCI 126
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANK DQ K+GI PAK+DE++KEH F+GWFETSAK+N+NI++AAK+LV KIL NDK+
Sbjct: 127 LLANKSDQQKQGIVTTPAKLDEYVKEHGFAGWFETSAKENVNIEEAAKSLVNKILMNDKM 186
Query: 633 QANGDSHATSEAVFSLNRNSQETKN-GRNCAC 663
G+ + + + N ++CAC
Sbjct: 187 LNTGEIVDSERFALAGGGGGKADINPKKSCAC 218
>gi|195332749|ref|XP_002033056.1| GM20620 [Drosophila sechellia]
gi|194125026|gb|EDW47069.1| GM20620 [Drosophila sechellia]
Length = 382
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 174 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 233
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 234 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 293
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 294 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 353
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 354 ISADLADGDKFNLSTA----DATGSDAKN--KCSC 382
>gi|91082557|ref|XP_974043.1| PREDICTED: similar to lightoid CG8024-PB [Tribolium castaneum]
gi|270007568|gb|EFA04016.1| hypothetical protein TcasGA2_TC014165 [Tribolium castaneum]
Length = 371
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 180/219 (82%), Gaps = 2/219 (0%)
Query: 445 VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH 504
VS +K ++++ LYKILVIG+LGAGKTSIIKRYVH+FF+ HYRATIGVDFALKVL+WD
Sbjct: 155 VSYANKTTERKDHLYKILVIGDLGAGKTSIIKRYVHRFFTQHYRATIGVDFALKVLNWDD 214
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
T+IRLQLWDIAGQER+GNMTRVYYKEAVGAFIVFDVTR TF++V KWK DLD+KV L
Sbjct: 215 NTLIRLQLWDIAGQERYGNMTRVYYKEAVGAFIVFDVTRTNTFESVAKWKSDLDSKVQLS 274
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
DG+PIPCVLLANKCDQ KEG+ N+P K+DE+ KE+ F+ WFETSAKDNINID+AA LV
Sbjct: 275 DGSPIPCVLLANKCDQQKEGLVNHPNKMDEYCKENGFTTWFETSAKDNINIDEAANALVA 334
Query: 625 KILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
KILEND + N DS E FS+++ +NG+ C+C
Sbjct: 335 KILENDTL-LNVDS-LKDEDKFSISKEPSAQRNGKMCSC 371
>gi|195456043|ref|XP_002074978.1| GK22864 [Drosophila willistoni]
gi|194171063|gb|EDW85964.1| GK22864 [Drosophila willistoni]
Length = 685
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 172/212 (81%), Gaps = 3/212 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 476 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDANTIVRLQL 535
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+ IPC+
Sbjct: 536 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSAIPCI 595
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK- 631
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK
Sbjct: 596 LLANKCDQEKQGIVTQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 655
Query: 632 VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ A+ D S + N QE KN C+C
Sbjct: 656 ITADLDDGDKFNLSSSNDPNGQEAKN--KCSC 685
>gi|114052040|ref|NP_001040211.1| Rab-related protein [Bombyx mori]
gi|87248399|gb|ABD36252.1| Rab-related protein [Bombyx mori]
Length = 231
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 176/211 (83%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++RE LYKILVIGE G GKTSIIKRYVHQFFS HYRATIGVDFALKVL+ D TIIR QL
Sbjct: 19 ERREHLYKILVIGEWGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNGDSNTIIRWQL 78
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDV+R ATFDAV+KWK DLDAKV LPDG+ IPC+
Sbjct: 79 WDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCI 138
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ KEGI N+PAK+DE+ +E F+GWFETSAK+NINI++AA++LV KIL NDK+
Sbjct: 139 LLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKL 198
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
N D+ ++V + ++++G N AC
Sbjct: 199 LQNNDTRDGDKSVIDHKIANGDSRDGANKAC 229
>gi|194863234|ref|XP_001970342.1| GG10573 [Drosophila erecta]
gi|190662209|gb|EDV59401.1| GG10573 [Drosophila erecta]
Length = 414
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 174/216 (80%), Gaps = 12/216 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 206 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 265
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 266 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 325
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 326 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 385
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRN-CAC 663
A+GD F+L+ + +N C+C
Sbjct: 386 ISADLADGDK-------FNLSTGDATGADAKNKCSC 414
>gi|195401601|ref|XP_002059401.1| GJ18542 [Drosophila virilis]
gi|194142407|gb|EDW58813.1| GJ18542 [Drosophila virilis]
Length = 660
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 160/180 (88%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 453 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLHWDANTIVRLQL 512
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 572
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P ++DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 573 LLANKCDQEKQGIVTQPERMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 632
>gi|24652026|ref|NP_724764.1| lightoid, isoform C [Drosophila melanogaster]
gi|24652028|ref|NP_724765.1| lightoid, isoform E [Drosophila melanogaster]
gi|17861992|gb|AAL39473.1| LD04613p [Drosophila melanogaster]
gi|21627636|gb|AAM68817.1| lightoid, isoform C [Drosophila melanogaster]
gi|21627637|gb|AAM68818.1| lightoid, isoform E [Drosophila melanogaster]
gi|220942922|gb|ACL84004.1| ltd-PC [synthetic construct]
gi|220953086|gb|ACL89086.1| ltd-PC [synthetic construct]
Length = 388
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/229 (66%), Positives = 177/229 (77%), Gaps = 10/229 (4%)
Query: 439 NGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK 498
NG + + DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALK
Sbjct: 166 NGYLHNGAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALK 225
Query: 499 VLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLD 558
VL WD TI+RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD
Sbjct: 226 VLQWDANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLD 285
Query: 559 AKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA 618
+KV LPDG+PIPC+LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+A
Sbjct: 286 SKVQLPDGSPIPCILLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEA 345
Query: 619 AKTLVQKILENDKV----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+ LV KIL NDK+ A+GD S A + + KN C+C
Sbjct: 346 ARALVNKILINDKLISADLADGDKFNLSAA----DATGSDAKN--KCSC 388
>gi|195029497|ref|XP_001987609.1| GH19866 [Drosophila grimshawi]
gi|193903609|gb|EDW02476.1| GH19866 [Drosophila grimshawi]
Length = 664
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 165/192 (85%), Gaps = 2/192 (1%)
Query: 443 KEVSPYSKMP--DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
+E+ P P +KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL
Sbjct: 444 QEMEPTIMAPSSEKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVL 503
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
WD TI+RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+K
Sbjct: 504 HWDTNTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSK 563
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+PIPC+LLANKCDQ K+GI P ++DE+++E+ F+GWFETSAK+NINID+AA+
Sbjct: 564 VQLPDGSPIPCILLANKCDQEKQGIVTQPERMDEYVRENGFAGWFETSAKENINIDEAAR 623
Query: 621 TLVQKILENDKV 632
LV KIL NDK+
Sbjct: 624 ALVNKILINDKL 635
>gi|24652024|ref|NP_724763.1| lightoid, isoform D [Drosophila melanogaster]
gi|23240365|gb|AAM68816.2| lightoid, isoform D [Drosophila melanogaster]
gi|237681229|gb|ACR10181.1| FI09421p [Drosophila melanogaster]
Length = 222
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 14 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 73
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 74 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 133
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 134 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 193
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 194 ISADLADGDKFNLSAA----DATGSDAKN--KCSC 222
>gi|25012172|gb|AAN71203.1| GH26660p, partial [Drosophila melanogaster]
Length = 306
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 98 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 157
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 158 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 217
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 218 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 277
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 278 ISADLADGDKFNLSAA----DATGSDAKN--KCSC 306
>gi|6561893|dbj|BAA88238.1| Rab-related protein 1 [Drosophila melanogaster]
Length = 231
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 173/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 23 DKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 82
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 83 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 142
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 143 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 202
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 203 ISADLADGDKFNLSAA----DATGSDAKN--KCSC 231
>gi|194754483|ref|XP_001959524.1| GF12008 [Drosophila ananassae]
gi|190620822|gb|EDV36346.1| GF12008 [Drosophila ananassae]
Length = 405
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/196 (74%), Positives = 166/196 (84%), Gaps = 4/196 (2%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYKILVIGELG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 196 EKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 255
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 256 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 315
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 316 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 375
Query: 633 ----QANGDSHATSEA 644
A+GD S A
Sbjct: 376 ITADLADGDKFNLSSA 391
>gi|27819805|gb|AAO24951.1| RE56408p [Drosophila melanogaster]
Length = 222
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 172/215 (80%), Gaps = 10/215 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DKRE LYKILVIG LG GKTS IKRYVHQFFS +YRATIGVDFALKVL WD TI+RLQL
Sbjct: 14 DKREHLYKILVIGGLGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQL 73
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TFD V KWK+DLD+KV LPDG+PIPC+
Sbjct: 74 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCI 133
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCDQ K+GI P K+DE+++E+ F+GWFETSAK+NINID+AA+ LV KIL NDK+
Sbjct: 134 LLANKCDQEKQGIITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKL 193
Query: 633 ----QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
A+GD S A + + KN C+C
Sbjct: 194 ISADLADGDKFNLSAA----DATGSDAKN--KCSC 222
>gi|405967886|gb|EKC33005.1| Ras-related protein Rab-32 [Crassostrea gigas]
Length = 270
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 138/173 (79%), Positives = 156/173 (90%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+K+E LYKILVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKVL+WD +TI+RLQL
Sbjct: 13 EKKEHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDADTIVRLQL 72
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVG FIVFDVTRA+TFDAV+KWK DLD+KV L DG+P+PCV
Sbjct: 73 WDIAGQERFGNMTRVYYKEAVGCFIVFDVTRASTFDAVVKWKTDLDSKVQLADGSPVPCV 132
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
LLANKCDQ KEG+ NN ++D+F KE F GWFETSAK+NINIDD+A+ LVQ+
Sbjct: 133 LLANKCDQTKEGVVNNSNQMDDFCKEKGFIGWFETSAKENINIDDSARFLVQR 185
>gi|194227608|ref|XP_001496437.2| PREDICTED: hypothetical protein LOC100065954 [Equus caballus]
Length = 430
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 137/178 (76%), Positives = 159/178 (89%), Gaps = 1/178 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD+ T++RLQ
Sbjct: 224 PETREHLFKMLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQ 283
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 284 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGSPIPA 343
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ KEG NP ++D+F KEH F+GWFETSAKDNINID+AA+ LV+ ILEN
Sbjct: 344 VLLANKCDQKKEG-GQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILEN 400
>gi|193657249|ref|XP_001950152.1| PREDICTED: ras-related protein Rab-38-like isoform 1 [Acyrthosiphon
pisum]
Length = 239
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 170/207 (82%), Gaps = 4/207 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KILVIGELG GKTSIIKRYVH+FFS HYRATIGVDFALK L WD T+IRLQLWDI
Sbjct: 36 EYLFKILVIGELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTVIRLQLWDI 95
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERFGNMTRVYYK+A+GAF+VFDVTR ATF+AV KWKQDLDAKV+L DG+PIPCVLLA
Sbjct: 96 AGQERFGNMTRVYYKDALGAFVVFDVTRPATFEAVAKWKQDLDAKVSLEDGSPIPCVLLA 155
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD+ KEG+ N+ AK+DEF KE+ F+ W+ETSAK+N++IDDAAKTLV +IL K A
Sbjct: 156 NKCDETKEGMVNSIAKMDEFCKENMFTAWYETSAKENVHIDDAAKTLVTQIL---KYTAQ 212
Query: 636 GD-SHATSEAVFSLNRNSQETKNGRNC 661
++ S+ LN ET+ G +C
Sbjct: 213 YKPTYLKSKGQIILNNTPNETQKGCSC 239
>gi|328702314|ref|XP_003241872.1| PREDICTED: ras-related protein Rab-38-like isoform 2 [Acyrthosiphon
pisum]
Length = 214
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 170/207 (82%), Gaps = 4/207 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KILVIGELG GKTSIIKRYVH+FFS HYRATIGVDFALK L WD T+IRLQLWDI
Sbjct: 11 EYLFKILVIGELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTVIRLQLWDI 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERFGNMTRVYYK+A+GAF+VFDVTR ATF+AV KWKQDLDAKV+L DG+PIPCVLLA
Sbjct: 71 AGQERFGNMTRVYYKDALGAFVVFDVTRPATFEAVAKWKQDLDAKVSLEDGSPIPCVLLA 130
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD+ KEG+ N+ AK+DEF KE+ F+ W+ETSAK+N++IDDAAKTLV +IL K A
Sbjct: 131 NKCDETKEGMVNSIAKMDEFCKENMFTAWYETSAKENVHIDDAAKTLVTQIL---KYTAQ 187
Query: 636 GD-SHATSEAVFSLNRNSQETKNGRNC 661
++ S+ LN ET+ G +C
Sbjct: 188 YKPTYLKSKGQIILNNTPNETQKGCSC 214
>gi|410960188|ref|XP_003986676.1| PREDICTED: ras-related protein Rab-32 [Felis catus]
Length = 225
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 135/180 (75%), Positives = 159/180 (88%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGSPIPA 138
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+G NP+++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 139 VLLANKCDQKKDG-GQNPSQLDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ 197
>gi|417408732|gb|JAA50904.1| Putative gtp-binding protein-like ras superfamily, partial
[Desmodus rotundus]
Length = 215
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 136/183 (74%), Positives = 159/183 (86%), Gaps = 1/183 (0%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
+ +P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++
Sbjct: 6 TAVPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 65
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP G P
Sbjct: 66 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDLDSKVHLPSGGP 125
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ K+G NP++ID+F KEH F+GWFETSAKDNINID+AA+ LV+ IL
Sbjct: 126 IPAVLLANKCDQKKDG-GQNPSQIDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILM 184
Query: 629 NDK 631
N +
Sbjct: 185 NQQ 187
>gi|301774833|ref|XP_002922840.1| PREDICTED: ras-related protein Rab-32-like [Ailuropoda melanoleuca]
Length = 281
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 166/212 (78%), Gaps = 11/212 (5%)
Query: 430 VVAGKTSITNGSSKEVSPYSK----------MPDKREFLYKILVIGELGAGKTSIIKRYV 479
V AG I G SK V Y P+ RE L+K+LVIGELG GKTSIIKRYV
Sbjct: 43 VAAGICKIGAGISKIVWTYQHGLWLTCWXXXAPETREHLFKVLVIGELGVGKTSIIKRYV 102
Query: 480 HQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVF 539
HQ FS HYRATIGVDFALKVL+WD+ T++RLQLWDIAGQERFGNMTRVYY+EAVGAFIVF
Sbjct: 103 HQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWDIAGQERFGNMTRVYYREAVGAFIVF 162
Query: 540 DVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEH 599
D++R +TF+AVLKWK DLD KV L +G+PIP VLLANKCDQ K+G NP ++D+F KEH
Sbjct: 163 DISRGSTFEAVLKWKSDLDGKVRLANGSPIPAVLLANKCDQKKDG-GQNPPQMDQFCKEH 221
Query: 600 NFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 222 GFTGWFETSAKDNINIDEAARFLVENILANHQ 253
>gi|395834788|ref|XP_003790374.1| PREDICTED: uncharacterized protein LOC100955231 [Otolemur
garnettii]
Length = 518
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 158/180 (87%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 312 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 371
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 372 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDLDSKVHLPNGSPIPA 431
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ ++G +P+++D+F EH F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 432 VLLANKCDQKRDG-GQSPSQMDQFCSEHGFTGWFETSAKDNINIDEAARFLVENILANHQ 490
>gi|403269920|ref|XP_003926953.1| PREDICTED: ras-related protein Rab-32, partial [Saimiri boliviensis
boliviensis]
Length = 212
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 165/189 (87%), Gaps = 1/189 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 6 PEIREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 65
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAFIVFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 66 LWDIAGQERFGNMTRVYYKEAVGAFIVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 125
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ ++ + +P+++D+F KEH F+GWFETSAKDNINID+A++ LV+ IL N +
Sbjct: 126 VLLANKCDQNRD-TSQSPSQMDQFCKEHGFTGWFETSAKDNINIDEASRFLVENILANHQ 184
Query: 632 VQANGDSHA 640
+N D+ A
Sbjct: 185 SFSNEDNDA 193
>gi|397480709|ref|XP_003811617.1| PREDICTED: uncharacterized protein LOC100988764 [Pan paniscus]
Length = 561
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 355 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 414
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 415 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 474
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 475 VLLANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 533
>gi|332825172|ref|XP_001161467.2| PREDICTED: ras-related protein Rab-32 [Pan troglodytes]
gi|410212486|gb|JAA03462.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410251312|gb|JAA13623.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410295694|gb|JAA26447.1| RAB32, member RAS oncogene family [Pan troglodytes]
gi|410331643|gb|JAA34768.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 139 VLLANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>gi|344264823|ref|XP_003404489.1| PREDICTED: ras-related protein Rab-32-like [Loxodonta africana]
Length = 225
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 160/181 (88%), Gaps = 1/181 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD +T++RL
Sbjct: 18 VPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRL 77
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQERFGNMTRVYYKEA+GAFIVFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 78 QLWDIAGQERFGNMTRVYYKEALGAFIVFDISRSSTFEAVLKWKNDLDSKVHLPNGSPIP 137
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VLLANKCDQ KE +P ++D+F KEH FSGWFETSAKDNINID+AA+ LV+ IL N
Sbjct: 138 AVLLANKCDQKKES-GQSPPQMDQFCKEHGFSGWFETSAKDNINIDEAARFLVENILANH 196
Query: 631 K 631
+
Sbjct: 197 Q 197
>gi|346472783|gb|AEO36236.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 302 bits (774), Expect = 3e-79, Method: Composition-based stats.
Identities = 140/185 (75%), Positives = 162/185 (87%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE LYKILVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKV+ WD T+IRLQLW
Sbjct: 5 QREHLYKILVIGELGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVVEWDDNTLIRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TF+AV KWK DLD+KV LP+G PIPCVL
Sbjct: 65 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRSQTFEAVRKWKMDLDSKVQLPEGTPIPCVL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCD KEGI NN A+++EF KE+NF+GWF TSAK+N+NI++AA+ L+ +IL ++K
Sbjct: 125 LANKCDMSKEGIVNNAAEMNEFCKENNFAGWFLTSAKENLNIEEAARFLITQILHHEKAL 184
Query: 634 ANGDS 638
+ GDS
Sbjct: 185 SLGDS 189
>gi|241030850|ref|XP_002406512.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
gi|215491988|gb|EEC01629.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
Length = 228
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 135/185 (72%), Positives = 156/185 (84%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE LYKILVIG+LG GKTSIIKRYVHQFFS HYRATIGVDFALKV++WD T+IRLQLW
Sbjct: 20 QREHLYKILVIGDLGTGKTSIIKRYVHQFFSHHYRATIGVDFALKVINWDENTLIRLQLW 79
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAFIVFDVTR+ TF+AV KWK DLD+KV P+GN IPCVL
Sbjct: 80 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRSQTFEAVKKWKMDLDSKVQQPEGNSIPCVL 139
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
L NKCD KEGI N+ + ++EF KE+NF+GWF TSAK+N+NID+AA+ L+ +IL K
Sbjct: 140 LGNKCDMSKEGIVNSSSAMNEFCKENNFAGWFLTSAKENLNIDEAARFLISQILRTQKAV 199
Query: 634 ANGDS 638
DS
Sbjct: 200 NMDDS 204
>gi|296199411|ref|XP_002747112.1| PREDICTED: ras-related protein Rab-32 [Callithrix jacchus]
Length = 225
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 166/192 (86%), Gaps = 1/192 (0%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
++ P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++
Sbjct: 16 ARAPEIREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+P
Sbjct: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ ++ + +P+++D+F KEH F+GWFETSAKDNINID+A++ LV+ IL
Sbjct: 136 IPAVLLANKCDQNRD-TSQSPSQMDQFCKEHGFTGWFETSAKDNINIDEASRFLVENILA 194
Query: 629 NDKVQANGDSHA 640
N + N D+ A
Sbjct: 195 NHQSFPNEDNDA 206
>gi|1388197|gb|AAB02833.1| low-Mr GTP-binding protein Rab32 [Homo sapiens]
Length = 210
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 4 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 63
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 64 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 123
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 124 VLLANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 182
>gi|410295692|gb|JAA26446.1| RAB32, member RAS oncogene family [Pan troglodytes]
Length = 225
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 133/180 (73%), Positives = 161/180 (89%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 139 VLLANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>gi|291397122|ref|XP_002714910.1| PREDICTED: low-Mr GTP-binding protein Rab32-like [Oryctolagus
cuniculus]
Length = 230
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 27 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 86
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+ IP VLL
Sbjct: 87 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSAIPAVLL 146
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ +EG NP ++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 147 ANKCDQKREG-GQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ 202
>gi|348524949|ref|XP_003449985.1| PREDICTED: ras-related protein Rab-32-like isoform 1 [Oreochromis
niloticus]
Length = 213
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 159/187 (85%), Gaps = 5/187 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFDVTR +TFDAV KWK DLD+KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFDAVSKWKHDLDSKVKLANGNPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV-- 632
ANKCDQ KE +NN A +D F KE F GWFETSAKDNIN+D+AA+ LV+ IL NDK
Sbjct: 130 ANKCDQKKEN-SNNTALMDNFCKETGFLGWFETSAKDNINVDEAARFLVENILANDKGLP 188
Query: 633 --QANGD 637
++NGD
Sbjct: 189 YEESNGD 195
>gi|348524951|ref|XP_003449986.1| PREDICTED: ras-related protein Rab-32-like isoform 2 [Oreochromis
niloticus]
Length = 206
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 138/188 (73%), Positives = 160/188 (85%), Gaps = 5/188 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T++RLQLW
Sbjct: 2 QQEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TFDAV KWK DLD+KV L +GNPIP VL
Sbjct: 62 DIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFDAVSKWKHDLDSKVKLANGNPIPSVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV- 632
LANKCDQ KE +NN A +D F KE F GWFETSAKDNIN+D+AA+ LV+ IL NDK
Sbjct: 122 LANKCDQKKEN-SNNTALMDNFCKETGFLGWFETSAKDNINVDEAARFLVENILANDKGL 180
Query: 633 ---QANGD 637
++NGD
Sbjct: 181 PYEESNGD 188
>gi|297679366|ref|XP_002817507.1| PREDICTED: ras-related protein Rab-32 [Pongo abelii]
Length = 225
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 159/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILANHQ 197
>gi|426235199|ref|XP_004011577.1| PREDICTED: uncharacterized protein LOC101102738 [Ovis aries]
Length = 443
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ E L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 238 PETSEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 297
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TFDAVLKWK DLD+KV LP+G+PIP
Sbjct: 298 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFDAVLKWKSDLDSKVHLPNGSPIPA 357
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ P+++D+F KEH F+GWFETSAKDN+NID+AA+ LV+ IL N +
Sbjct: 358 VLLANKCDQKKDS-GQTPSQMDQFCKEHGFTGWFETSAKDNVNIDEAARFLVENILANHQ 416
>gi|332213568|ref|XP_003255895.1| PREDICTED: ras-related protein Rab-32 [Nomascus leucogenys]
Length = 225
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 159/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILANHQ 197
>gi|291227653|ref|XP_002733795.1| PREDICTED: lightoid-like [Saccoglossus kowalevskii]
Length = 217
Score = 300 bits (769), Expect = 1e-78, Method: Composition-based stats.
Identities = 144/215 (66%), Positives = 172/215 (80%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S +KRE LYK+LVIG+LG GKTS+IKRYVHQFFS HYRATIGVDFALKV++WD +T+I
Sbjct: 2 SSSGEKREHLYKVLVIGDLGTGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLI 61
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRA+TF+AV KWK DLD+KV LP+G
Sbjct: 62 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRASTFEAVQKWKNDLDSKVQLPNGQN 121
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ KEG+ NN +++D++ KE F GWFETSAK+NINID+AA+ LV IL
Sbjct: 122 IPVVLLANKCDQAKEGLVNNASQMDDYCKEKGFIGWFETSAKENINIDEAARFLVTAILA 181
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
NDK + D H +A+ + E G++ +C
Sbjct: 182 NDKSMNHEDQHQDKDALRLDGSGAIEENEGKSGSC 216
>gi|449497012|ref|XP_004176408.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32
[Taeniopygia guttata]
gi|449277837|gb|EMC85859.1| Ras-related protein Rab-32 [Columba livia]
Length = 218
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/183 (73%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S +P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T++
Sbjct: 9 SGVPECREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLV 68
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV LP+G+P
Sbjct: 69 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPNGSP 128
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ K+G + NP+++D+F +E F GWFETSAKDNINID+AA+ LV+ IL
Sbjct: 129 IPAVLLANKCDQKKDG-SQNPSQMDQFCREGGFVGWFETSAKDNINIDEAARFLVENILA 187
Query: 629 NDK 631
N K
Sbjct: 188 NYK 190
>gi|5803133|ref|NP_006825.1| ras-related protein Rab-32 [Homo sapiens]
gi|2833245|sp|Q13637.3|RAB32_HUMAN RecName: Full=Ras-related protein Rab-32
gi|20379092|gb|AAM21106.1|AF498958_1 small GTP binding protein RAB32 [Homo sapiens]
gi|1575792|gb|AAB09599.1| low Mr GTP-binding protein Rab32 [Homo sapiens]
gi|15929226|gb|AAH15061.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|54696894|gb|AAV38819.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|61356867|gb|AAX41298.1| RAB32 member RAS oncogene family [synthetic construct]
gi|119568218|gb|EAW47833.1| RAB32, member RAS oncogene family [Homo sapiens]
gi|123987477|gb|ABM83808.1| RAB32, member RAS oncogene family [synthetic construct]
gi|123999094|gb|ABM87130.1| RAB32, member RAS oncogene family [synthetic construct]
gi|261861624|dbj|BAI47334.1| RAB32, member RAS oncogene family [synthetic construct]
Length = 225
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 159/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>gi|302564755|ref|NP_001180823.1| ras-related protein Rab-32 [Macaca mulatta]
gi|402868027|ref|XP_003898124.1| PREDICTED: ras-related protein Rab-32 [Papio anubis]
gi|380809090|gb|AFE76420.1| ras-related protein Rab-32 [Macaca mulatta]
Length = 225
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 158/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQTPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILANHQ 197
>gi|54696892|gb|AAV38818.1| RAB32, member RAS oncogene family [synthetic construct]
gi|61366667|gb|AAX42890.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 159/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>gi|16741109|gb|AAH16409.1| RAB32, member RAS oncogene family [Mus musculus]
gi|33585672|gb|AAH55945.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G ++ + + P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 64
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD T++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 65 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 124
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H FSGWFETSAKDNINID+A
Sbjct: 125 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFSGWFETSAKDNINIDEAT 183
Query: 620 KTLVQKILENDK 631
+ LV+ +L N +
Sbjct: 184 RFLVENMLANQQ 195
>gi|329664240|ref|NP_001192879.1| ras-related protein Rab-32 [Bos taurus]
gi|296483942|tpg|DAA26057.1| TPA: RAB32, member RAS oncogene family-like [Bos taurus]
Length = 225
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 132/176 (75%), Positives = 154/176 (87%), Gaps = 1/176 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWDI
Sbjct: 24 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 83
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERFGNMTRVYYKEAVGAFIVFD++R +TFDAVLKWK DLD+KV LP+G+PIP VLLA
Sbjct: 84 AGQERFGNMTRVYYKEAVGAFIVFDISRGSTFDAVLKWKSDLDSKVHLPNGSPIPAVLLA 143
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NKCDQ K+ P+++D+F KEH F+GWFETSAKDN+NID+AA+ LV+ IL N +
Sbjct: 144 NKCDQKKDS-GQTPSQMDQFCKEHGFTGWFETSAKDNVNIDEAARFLVENILANHQ 198
>gi|13385896|ref|NP_080681.1| ras-related protein Rab-32 [Mus musculus]
gi|37999779|sp|Q9CZE3.3|RAB32_MOUSE RecName: Full=Ras-related protein Rab-32
gi|12849626|dbj|BAB28421.1| unnamed protein product [Mus musculus]
gi|23268303|gb|AAN11298.1| RAB32 [Mus musculus]
gi|26353712|dbj|BAC40486.1| unnamed protein product [Mus musculus]
gi|74186726|dbj|BAE34818.1| unnamed protein product [Mus musculus]
gi|74195856|dbj|BAE30489.1| unnamed protein product [Mus musculus]
gi|74201136|dbj|BAE37425.1| unnamed protein product [Mus musculus]
gi|112293023|dbj|BAF02889.1| Rab32 [Mus musculus]
gi|148671579|gb|EDL03526.1| RAB32, member RAS oncogene family [Mus musculus]
Length = 223
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G ++ + + P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 64
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD T++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 65 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 124
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H F+GWFETSAKDNINID+A
Sbjct: 125 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFTGWFETSAKDNINIDEAT 183
Query: 620 KTLVQKILENDK 631
+ LV+ +L N +
Sbjct: 184 RFLVENMLANQQ 195
>gi|47224601|emb|CAG03585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 212
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 157/187 (83%), Gaps = 5/187 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T+IRLQLWD
Sbjct: 10 REYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLIRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVKLANGNPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV-- 632
ANKCDQ KE N+ A +D F KE F GWFETSAKDNIN+D+AA LV+ IL NDK
Sbjct: 130 ANKCDQKKESF-NSKALMDSFCKEAGFLGWFETSAKDNINVDEAAHFLVESILGNDKGLP 188
Query: 633 --QANGD 637
++NGD
Sbjct: 189 YEESNGD 195
>gi|178056544|ref|NP_001116648.1| ras-related protein Rab-32 [Sus scrofa]
gi|122131882|sp|Q06AU5.1|RAB32_PIG RecName: Full=Ras-related protein Rab-32
gi|115394762|gb|ABI97175.1| RAB32 [Sus scrofa]
Length = 226
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 80
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGA +VFD++R + F+AVLKWK DLD+KV LP+G+PIP
Sbjct: 81 LWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPA 140
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ NP+++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 141 VLLANKCDQKKDS-GQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ 199
>gi|189053349|dbj|BAG35135.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 132/175 (75%), Positives = 157/175 (89%), Gaps = 1/175 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLSKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N
Sbjct: 142 ANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195
>gi|147903317|ref|NP_001090131.1| RAB32, member RAS oncogene family [Xenopus laevis]
gi|80477119|gb|AAI08513.1| MGC130912 protein [Xenopus laevis]
Length = 222
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 165/202 (81%), Gaps = 5/202 (2%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G+ +E P + P+++E+L+K+LVIGELG GKTS+IKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GAGEEQIP--RAPERKEYLFKVLVIGELGVGKTSVIKRYVHQLFSQHYRATIGVDFALKV 62
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
++WD+ T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+A+ KWK DLD+
Sbjct: 63 INWDNNTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAITKWKSDLDS 122
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP G PIP VLLANKCDQ KE +P ++D F KE+ F+ WFETSAKDN+NID+AA
Sbjct: 123 KVFLPSGGPIPAVLLANKCDQKKENSIQSPHQMDLFCKENGFAAWFETSAKDNMNIDEAA 182
Query: 620 KTLVQKILENDK---VQANGDS 638
+ LV+ IL N K V+ N D
Sbjct: 183 RCLVENILANAKNFPVEENDDG 204
>gi|281350978|gb|EFB26562.1| hypothetical protein PANDA_011856 [Ailuropoda melanoleuca]
Length = 209
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 134/181 (74%), Positives = 157/181 (86%), Gaps = 2/181 (1%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD+ T++RLQ
Sbjct: 2 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQ 61
Query: 512 LWDIAG-QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
LWDIAG QERFGNMTRVYY+EAVGAFIVFD++R +TF+AVLKWK DLD KV L +G+PIP
Sbjct: 62 LWDIAGRQERFGNMTRVYYREAVGAFIVFDISRGSTFEAVLKWKSDLDGKVRLANGSPIP 121
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VLLANKCDQ K+G NP ++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N
Sbjct: 122 AVLLANKCDQKKDG-GQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANH 180
Query: 631 K 631
+
Sbjct: 181 Q 181
>gi|89258439|gb|ABD65443.1| Rab32 [Suberites domuncula]
Length = 212
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/178 (75%), Positives = 153/178 (85%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K+E LYKILVIG+LG GKTSIIKRYVHQFFSPHYRATIGVDFALKVL+WD+ T IRLQLW
Sbjct: 8 KQEHLYKILVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNWDNNTTIRLQLW 67
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV WK DLD+KV LP+G PIP VL
Sbjct: 68 DIAGQERFGNMTRVYYKEAVGAFVVFDVTRLSTFEAVQMWKADLDSKVLLPNGKPIPAVL 127
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LANKCD EG N ++DE+ ++ NF WFETSAK+NI ID+AA++LV KILEND+
Sbjct: 128 LANKCDLASEGFLGNVNQLDEYCRDKNFHAWFETSAKENIGIDEAARSLVAKILENDE 185
>gi|58332248|ref|NP_001011276.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|56789062|gb|AAH87989.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89266817|emb|CAJ83386.1| RAB32, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 223
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/192 (69%), Positives = 159/192 (82%), Gaps = 3/192 (1%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ P+++E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD T++R
Sbjct: 14 RAPERKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSSTLVR 73
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+A+ KWK DLD+KV LP G PI
Sbjct: 74 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAITKWKSDLDSKVFLPSGGPI 133
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
P VLLANKCDQ KE +P ++D F KE+ F+ WFETSAKDN+NID+AA+ LV+ IL N
Sbjct: 134 PAVLLANKCDQKKENSLQSPHQMDNFCKENGFAAWFETSAKDNMNIDEAARCLVENILAN 193
Query: 630 DK---VQANGDS 638
K V+ N D
Sbjct: 194 AKNFPVEENDDG 205
>gi|50742500|ref|XP_419654.1| PREDICTED: ras-related protein Rab-32 [Gallus gallus]
Length = 218
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
P S + + RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +
Sbjct: 6 GPVSGVAESREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSK 65
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV LP+
Sbjct: 66 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPN 125
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
G+PIP VLLANKCDQ K+G + N +++D+F +E F GWFETSAKDNINID+AA+ LV+
Sbjct: 126 GSPIPAVLLANKCDQKKDG-SQNLSQMDQFCREGGFIGWFETSAKDNINIDEAARFLVEN 184
Query: 626 ILENDK 631
IL N K
Sbjct: 185 ILANYK 190
>gi|326915700|ref|XP_003204151.1| PREDICTED: ras-related protein Rab-32-like [Meleagris gallopavo]
Length = 218
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/186 (72%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
P S + + RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +
Sbjct: 6 GPVSGVAESREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSK 65
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV LP+
Sbjct: 66 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPN 125
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
G+PIP VLLANKCDQ K+G + N +++D+F +E F GWFETSAKDNINID+AA+ LV+
Sbjct: 126 GSPIPAVLLANKCDQKKDG-SQNLSQMDQFCREGGFIGWFETSAKDNINIDEAARFLVEN 184
Query: 626 ILENDK 631
IL N K
Sbjct: 185 ILANYK 190
>gi|74204808|dbj|BAE35466.1| unnamed protein product [Mus musculus]
Length = 223
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 130/192 (67%), Positives = 163/192 (84%), Gaps = 1/192 (0%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G ++ + + P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 64
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD ++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 65 LNWDSRALVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 124
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H F+GWFETSAKDNINID+A
Sbjct: 125 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFTGWFETSAKDNINIDEAT 183
Query: 620 KTLVQKILENDK 631
+ LV+ +L N +
Sbjct: 184 RFLVENMLANQQ 195
>gi|41152211|ref|NP_958489.1| ras-related protein Rab-32 [Danio rerio]
gi|29437266|gb|AAH49531.1| RAB32, member RAS oncogene family [Danio rerio]
Length = 213
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 154/177 (87%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAFIVFD+TR +TF+AV KWK DLD KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDTKVKLANGNPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+G +NN + +D F KE F GWFETSAK+NIN+D+AA+ LV+ IL NDK
Sbjct: 130 ANKCDQKKDG-SNNSSLMDNFCKEAGFLGWFETSAKENINVDEAARFLVENILLNDK 185
>gi|42542760|gb|AAH66502.1| Rab32 protein [Danio rerio]
gi|62089548|gb|AAH92179.1| Rab32 protein [Danio rerio]
gi|182891326|gb|AAI64307.1| Rab32 protein [Danio rerio]
Length = 213
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 154/177 (87%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAFIVFD+TR +TF+AV KWK DLD KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDTKVKLANGNPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+G +NN + +D F KE F GWFETSAK+NIN+D+AA+ LV+ IL NDK
Sbjct: 130 ANKCDQKKDG-SNNSSLMDNFCKEAGFLGWFETSAKENINVDEAARFLVENILLNDK 185
>gi|126310667|ref|XP_001370750.1| PREDICTED: ras-related protein Rab-32-like [Monodelphis domestica]
Length = 225
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 167/199 (83%), Gaps = 5/199 (2%)
Query: 437 ITNGSSKE----VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIG 492
+ GSS E V+ + +P+ +E L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIG
Sbjct: 1 MAGGSSGETGRGVAAGTAVPETQEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG 60
Query: 493 VDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK 552
VDFALKVL+WD +T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TFDAVLK
Sbjct: 61 VDFALKVLNWDSKTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFDAVLK 120
Query: 553 WKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
WK DLD+KV LP+G PIP +LLANKCDQ K+ ++P+++D+F KE+ F+GWFETSAKDN
Sbjct: 121 WKNDLDSKVQLPNGIPIPTILLANKCDQKKDS-GHSPSQMDQFCKENGFTGWFETSAKDN 179
Query: 613 INIDDAAKTLVQKILENDK 631
INID+A + LV+ IL + K
Sbjct: 180 INIDEAVRFLVENILAHYK 198
>gi|61366674|gb|AAX42891.1| RAB32 member RAS oncogene family [synthetic construct]
Length = 226
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 158/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+ KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQVDQSCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>gi|432945329|ref|XP_004083544.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 213
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 158/187 (84%), Gaps = 5/187 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFDVTR ATF+AV KWK DLD+KV L +GNPIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGATFEAVSKWKHDLDSKVKLTNGNPIPAVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV-- 632
ANKCDQ KE N P +D+F K+ F GWFETSAKDNIN+DDAA+ LV+ IL NDK
Sbjct: 130 ANKCDQKKESPNNTPL-MDKFCKDTGFLGWFETSAKDNINVDDAARFLVEHILANDKGLP 188
Query: 633 --QANGD 637
++NGD
Sbjct: 189 QEESNGD 195
>gi|354497825|ref|XP_003511018.1| PREDICTED: ras-related protein Rab-32-like [Cricetulus griseus]
gi|344237517|gb|EGV93620.1| Ras-related protein Rab-32 [Cricetulus griseus]
Length = 223
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 131/180 (72%), Positives = 158/180 (87%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS +YRATIGVDFALKVL+WD T++RLQ
Sbjct: 17 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVRLQ 76
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEA+GAF+VFD++R +TF+AVLKWK DLD+KV LP+G+PIP
Sbjct: 77 LWDIAGQERFGNMTRVYYKEALGAFVVFDLSRGSTFEAVLKWKSDLDSKVHLPNGSPIPA 136
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+G A +P+++D+F K+H F GWFETSAKDNINID+A + LV+ IL N +
Sbjct: 137 VLLANKCDQKKDG-AQSPSQMDQFCKDHGFIGWFETSAKDNINIDEATRFLVENILANQQ 195
>gi|126327830|ref|XP_001362365.1| PREDICTED: ras-related protein Rab-38-like [Monodelphis domestica]
Length = 211
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 132/176 (75%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 REHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLDAK+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKSDLDAKLTLPNGKPVSAVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KE+ F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLLNNGLKMDQFCKENGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|355752522|gb|EHH56642.1| hypothetical protein EGM_06097 [Macaca fascicularis]
Length = 244
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 39 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 98
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 99 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 158
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 159 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 214
>gi|21955138|ref|NP_665717.1| ras-related protein Rab-38 [Rattus norvegicus]
gi|206543|gb|AAA42000.1| rab-related GTP-binding protein [Rattus norvegicus]
gi|47125439|gb|AAH70513.1| RAB38, member RAS oncogene family [Rattus norvegicus]
gi|149069033|gb|EDM18585.1| Rab38, member of RAS oncogene family [Rattus norvegicus]
Length = 211
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|449269571|gb|EMC80332.1| Ras-related protein Rab-38 [Columba livia]
Length = 212
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/184 (71%), Positives = 161/184 (87%), Gaps = 2/184 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYK+LVIG+LG GKTSIIKRYVHQ FSPHYRATIGVDFALKVLSWD ET++RLQL
Sbjct: 5 NQKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQL 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EA+GAFIVFD+TR ATF+AV KWK+DLD+K+ LP+G P+P V
Sbjct: 65 WDIAGQERFGNMTRVYYREAMGAFIVFDITRPATFEAVTKWKEDLDSKLVLPNGKPVPAV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LLANKCDQ + + NN K+D+F KE+ F GWFETSAK+NINI++A++ LV+ I+ E+D
Sbjct: 125 LLANKCDQGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIASESD 184
Query: 631 KVQA 634
VQ+
Sbjct: 185 PVQS 188
>gi|410972497|ref|XP_003992695.1| PREDICTED: ras-related protein Rab-38 [Felis catus]
Length = 211
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLTNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|301779279|ref|XP_002925057.1| PREDICTED: ras-related protein Rab-38-like [Ailuropoda melanoleuca]
gi|281337581|gb|EFB13165.1| hypothetical protein PANDA_014483 [Ailuropoda melanoleuca]
Length = 211
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|157820973|ref|NP_001102372.1| ras-related protein Rab-32 [Rattus norvegicus]
gi|149039546|gb|EDL93708.1| similar to RAB32 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 223
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
+ +P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS +YRATIGVDFALKVL+WD T++
Sbjct: 14 TAVPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLV 73
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+KV LP+G+P
Sbjct: 74 RLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSP 133
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ K+ + +P+++++F K+H F GWFETSAKDNINID+A + LV+ +L
Sbjct: 134 IPAVLLANKCDQKKDS-SQSPSQMNQFCKDHGFIGWFETSAKDNINIDEATRFLVENMLA 192
Query: 629 NDK 631
N +
Sbjct: 193 NQQ 195
>gi|345787949|ref|XP_850212.2| PREDICTED: ras-related protein Rab-38 [Canis lupus familiaris]
Length = 211
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLINNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|118085220|ref|XP_425653.2| PREDICTED: ras-related protein Rab-38 [Gallus gallus]
gi|326914516|ref|XP_003203571.1| PREDICTED: ras-related protein Rab-38-like [Meleagris gallopavo]
Length = 212
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 160/183 (87%), Gaps = 2/183 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYK+LVIG+LG GKTSIIKRYVHQ FSPHYRATIGVDFALKVLSWD ET++RLQL
Sbjct: 5 NQKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQL 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK+DLD+K+ LP+G P+P V
Sbjct: 65 WDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVLPNGKPVPTV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LLANKCDQ + + NN K+D+F KE+ F GWFETSAK+NINI++A++ LV+ I+ E+D
Sbjct: 125 LLANKCDQGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIATESD 184
Query: 631 KVQ 633
VQ
Sbjct: 185 PVQ 187
>gi|355714911|gb|AES05158.1| RAB38, member RAS oncoprotein family [Mustela putorius furo]
Length = 230
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 25 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 84
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 85 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 144
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 145 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 200
>gi|224043671|ref|XP_002188382.1| PREDICTED: ras-related protein Rab-38 [Taeniopygia guttata]
Length = 212
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 131/184 (71%), Positives = 161/184 (87%), Gaps = 2/184 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYK+LVIG+LG GKTSIIKRYVHQ FSPHYRATIGVDFALKVL+WD ET++RLQL
Sbjct: 5 NQKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLNWDAETVVRLQL 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK+DLD+K+ LP+G P+P V
Sbjct: 65 WDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVLPNGKPVPAV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LLANKCDQ + + NN K+D+F KE+ F GWFETSAK+NINI++A++ LV+ I+ E+D
Sbjct: 125 LLANKCDQGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIASESD 184
Query: 631 KVQA 634
VQ+
Sbjct: 185 PVQS 188
>gi|426251467|ref|XP_004019443.1| PREDICTED: ras-related protein Rab-38 [Ovis aries]
Length = 211
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 153/177 (86%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLW
Sbjct: 5 HKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VL
Sbjct: 65 DIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
LANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 125 LANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|301614231|ref|XP_002936591.1| PREDICTED: ras-related protein Rab-38-like [Xenopus (Silurana)
tropicalis]
Length = 212
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 157/182 (86%), Gaps = 2/182 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYKILVIG+LG GKTSIIKRYVHQ FSPHYRATIGVDFALKVLSWD +T++RLQLW
Sbjct: 5 QKEHLYKILVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDSDTVVRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EAVGAFIVFDVTR ATF+AV KWK+DLD+K+TL +G P+ VL
Sbjct: 65 DIAGQERFGNMTRVYYREAVGAFIVFDVTRPATFEAVAKWKEDLDSKLTLANGVPVSAVL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ K+ N+ K+D+F KEH F W+ETSAK+NINID+A++ LV I+ E+D+
Sbjct: 125 LANKCDQGKDNFKNHFTKMDQFCKEHGFVAWYETSAKENINIDEASRCLVSHIIASESDQ 184
Query: 632 VQ 633
+Q
Sbjct: 185 MQ 186
>gi|355748839|gb|EHH53322.1| hypothetical protein EGM_13940, partial [Macaca fascicularis]
Length = 198
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 128/171 (74%), Positives = 153/171 (89%), Gaps = 1/171 (0%)
Query: 461 ILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQER 520
+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWDIAGQER
Sbjct: 1 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 60
Query: 521 FGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQ 580
FGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLLANKCDQ
Sbjct: 61 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 120
Query: 581 PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
K+ + P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 121 NKDS-SQTPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILANHQ 170
>gi|395535108|ref|XP_003769574.1| PREDICTED: ras-related protein Rab-32 [Sarcophilus harrisii]
Length = 225
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 166/199 (83%), Gaps = 5/199 (2%)
Query: 437 ITNGSSKEVSPYSK----MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIG 492
+ G+S E P + +P+ +E L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIG
Sbjct: 1 MAGGASGEPGPGAAAGIVVPETQEHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG 60
Query: 493 VDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK 552
VDFALKVL+WD +T++RLQLWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLK
Sbjct: 61 VDFALKVLNWDSKTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRESTFEAVLK 120
Query: 553 WKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
WK DLD+KV L +G PIP VLLANKCDQ K+ +++P+++D+F KE+ F+GWFETSAKDN
Sbjct: 121 WKNDLDSKVQLANGIPIPTVLLANKCDQNKDN-SHSPSQMDQFCKENGFTGWFETSAKDN 179
Query: 613 INIDDAAKTLVQKILENDK 631
INID+A + LV+ IL N K
Sbjct: 180 INIDEAVRFLVENILANYK 198
>gi|432108510|gb|ELK33226.1| Ras-related protein Rab-38 [Myotis davidii]
Length = 211
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD +T++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPDTVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|296471962|tpg|DAA14077.1| TPA: RAB38, member of RAS oncogene family-like [Bos taurus]
Length = 268
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 63 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 122
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 123 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 182
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 183 ANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 238
>gi|390369193|ref|XP_782400.2| PREDICTED: ras-related protein Rab-32-like [Strongylocentrotus
purpuratus]
Length = 214
Score = 290 bits (743), Expect = 1e-75, Method: Composition-based stats.
Identities = 136/179 (75%), Positives = 156/179 (87%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYK+LVIG+LG GKTS+IKRYVHQFFS HYRATIGVDFALKV++WD +T+IRLQL
Sbjct: 6 EKREHLYKVLVIGDLGVGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQL 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAFIVFDVTR +TF+AV KWK DLD+KV LP+G IP V
Sbjct: 66 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVAKWKHDLDSKVQLPNGTAIPAV 125
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LLANKCDQ KEG+ NN +++DE+ K+ F WFETSAKDNINID+AA+ LV IL NDK
Sbjct: 126 LLANKCDQTKEGLVNNSSQMDEYCKDKGFINWFETSAKDNINIDEAARFLVTSILANDK 184
>gi|410916645|ref|XP_003971797.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 213
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/187 (71%), Positives = 155/187 (82%), Gaps = 5/187 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV++WD +T++RLQLWD
Sbjct: 10 KEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV L +G+PIP VLL
Sbjct: 70 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVKLANGSPIPSVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV-- 632
ANKCDQ KE N+ +D F KE F GWFETSAKDNIN+D+AA LV IL NDK
Sbjct: 130 ANKCDQKKESF-NSKVLMDSFCKETGFLGWFETSAKDNINVDEAAHFLVDNILANDKGLP 188
Query: 633 --QANGD 637
++NGD
Sbjct: 189 YEESNGD 195
>gi|260824890|ref|XP_002607400.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
gi|229292747|gb|EEN63410.1| hypothetical protein BRAFLDRAFT_204961 [Branchiostoma floridae]
Length = 180
Score = 289 bits (740), Expect = 3e-75, Method: Composition-based stats.
Identities = 134/174 (77%), Positives = 156/174 (89%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK+E LYKILVIG+LG GKTSIIKRYVHQFFS HYRATIGVDFALKV++WD +T+IRLQL
Sbjct: 7 DKKEHLYKILVIGDLGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQL 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVGAF+VFDVTRA+TF+AV KWK DLD+KV LP+G IP V
Sbjct: 67 WDIAGQERFGNMTRVYYKEAVGAFVVFDVTRASTFEAVSKWKNDLDSKVQLPNGQSIPAV 126
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
LLANKCDQ KEG+ NN +++DE+ KE +F GWFETSAK+NINID+AA+ LV ++
Sbjct: 127 LLANKCDQAKEGMVNNTSQMDEYCKEKSFIGWFETSAKENINIDEAARYLVTRV 180
>gi|355561998|gb|EHH18630.1| hypothetical protein EGK_15275, partial [Macaca mulatta]
Length = 197
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Query: 462 LVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERF 521
LVIGELG GKTSIIKRYVHQ FS HYR+TIGVDFALKVL+WD T++RLQLWDIAGQERF
Sbjct: 1 LVIGELGVGKTSIIKRYVHQLFSQHYRSTIGVDFALKVLNWDSRTLVRLQLWDIAGQERF 60
Query: 522 GNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQP 581
GNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLLANKCDQ
Sbjct: 61 GNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQN 120
Query: 582 KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
K+ + P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 121 KDS-SQTPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILANHQ 169
>gi|443713143|gb|ELU06149.1| hypothetical protein CAPTEDRAFT_64412, partial [Capitella teleta]
Length = 190
Score = 288 bits (738), Expect = 6e-75, Method: Composition-based stats.
Identities = 132/174 (75%), Positives = 152/174 (87%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYK+LVIGELG GKTSIIKRYVHQFFS HYRATIGVDFALKV++WD +T+IRLQL
Sbjct: 17 EKREHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQL 76
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAVG FIVFDVTR +TFDAV KWK DLD+KV L DG+PIPCV
Sbjct: 77 WDIAGQERFGNMTRVYYKEAVGCFIVFDVTRTSTFDAVQKWKNDLDSKVQLADGSPIPCV 136
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
LLANKCDQ KEG+ + +++EF +E F WFETSAK+NINID++A+ LV K+
Sbjct: 137 LLANKCDQSKEGMVTSQTQMEEFCRERGFITWFETSAKENINIDESARCLVSKV 190
>gi|340379925|ref|XP_003388475.1| PREDICTED: ras-related protein Rab-32-like [Amphimedon
queenslandica]
Length = 210
Score = 288 bits (737), Expect = 6e-75, Method: Composition-based stats.
Identities = 140/210 (66%), Positives = 163/210 (77%), Gaps = 6/210 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K+E LYK+LVIG+LG GKTSIIKRYVHQFFSPHYRATIGVDFALKVL+WD+ T IRLQLW
Sbjct: 7 KQEHLYKVLVIGDLGTGKTSIIKRYVHQFFSPHYRATIGVDFALKVLNWDNNTTIRLQLW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYYKEAVGAF+VFD+TR +TF+AV WK DLD KV LP+G PIP VL
Sbjct: 67 DIAGQERFGNMTRVYYKEAVGAFVVFDMTRLSTFEAVTMWKSDLDNKVLLPNGKPIPAVL 126
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCD EG N ++D++ KE F+GWFETSAK+NI ID+AA+ LV KILEND+
Sbjct: 127 LANKCDLASEGFLGNVGQLDDYCKEKGFAGWFETSAKENIGIDEAARCLVAKILENDE-- 184
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + A + V + QETK C
Sbjct: 185 -SIEQQAPDKDVLHV---EQETKKKSGGCC 210
>gi|327261967|ref|XP_003215798.1| PREDICTED: ras-related protein Rab-32-like [Anolis carolinensis]
Length = 235
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD T++RLQLWD
Sbjct: 32 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLPWDSRTLVRLQLWD 91
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFDVTR +TF+AV KWK DLD+KV LP+G+PIP VLL
Sbjct: 92 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPNGSPIPAVLL 151
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ N +++D+F K+ F GWFETSAKDNINID+AA+ LV+ IL N K
Sbjct: 152 ANKCDQKKDS-GPNASQMDQFCKDGGFVGWFETSAKDNINIDEAARFLVENILANLK 207
>gi|431904249|gb|ELK09646.1| Ras-related protein Rab-32 [Pteropus alecto]
Length = 215
Score = 287 bits (734), Expect = 1e-74, Method: Composition-based stats.
Identities = 133/184 (72%), Positives = 156/184 (84%), Gaps = 1/184 (0%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+ +LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWDIAGQ
Sbjct: 16 FNVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 75
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G PIP VLLANKC
Sbjct: 76 ERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGGPIPVVLLANKC 135
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
DQ K+G NP+++++F KEH F+GWFETSAKDNINID+AA+ LV+ IL N + N D
Sbjct: 136 DQKKDG-GQNPSQMEQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQSFPNEDI 194
Query: 639 HATS 642
A S
Sbjct: 195 DADS 198
>gi|395521174|ref|XP_003764693.1| PREDICTED: ras-related protein Rab-38-like [Sarcophilus harrisii]
Length = 211
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/176 (73%), Positives = 152/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE LYK+ VIG+LG GKTSII+RYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 REHLYKLPVIGDLGVGKTSIIQRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKSDLDSKLTLPNGKPVSAVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KE+ F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLLNNGLKMDQFCKENGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|395814706|ref|XP_003780884.1| PREDICTED: ras-related protein Rab-38 [Otolemur garnettii]
Length = 211
Score = 285 bits (730), Expect = 4e-74, Method: Composition-based stats.
Identities = 132/176 (75%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 REHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|444728470|gb|ELW68927.1| Ras-related protein Rab-38 [Tupaia chinensis]
Length = 211
Score = 285 bits (730), Expect = 4e-74, Method: Composition-based stats.
Identities = 132/176 (75%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 REHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|332210934|ref|XP_003254567.1| PREDICTED: ras-related protein Rab-38 [Nomascus leucogenys]
Length = 211
Score = 285 bits (728), Expect = 6e-74, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 REHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|296216859|ref|XP_002754753.1| PREDICTED: ras-related protein Rab-38-like [Callithrix jacchus]
Length = 211
Score = 285 bits (728), Expect = 8e-74, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|344293786|ref|XP_003418601.1| PREDICTED: ras-related protein Rab-38-like [Loxodonta africana]
Length = 211
Score = 284 bits (727), Expect = 8e-74, Method: Composition-based stats.
Identities = 133/181 (73%), Positives = 156/181 (86%), Gaps = 1/181 (0%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ P+K E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++R
Sbjct: 2 QAPNK-EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR 60
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+
Sbjct: 61 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKSDLDSKLTLPNGKPV 120
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N
Sbjct: 121 SAVLLANKCDQGKDMLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN 180
Query: 630 D 630
+
Sbjct: 181 E 181
>gi|354498049|ref|XP_003511128.1| PREDICTED: ras-related protein Rab-38-like [Cricetulus griseus]
gi|344250686|gb|EGW06790.1| Ras-related protein Rab-38 [Cricetulus griseus]
Length = 211
Score = 284 bits (727), Expect = 8e-74, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|358419550|ref|XP_001252195.3| PREDICTED: ras-related protein Rab-38 isoform 1 [Bos taurus]
gi|359080887|ref|XP_002699093.2| PREDICTED: ras-related protein Rab-38 [Bos taurus]
gi|440893046|gb|ELR45967.1| Ras-related protein Rab-38 [Bos grunniens mutus]
Length = 211
Score = 284 bits (727), Expect = 1e-73, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|167518365|ref|XP_001743523.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778622|gb|EDQ92237.1| predicted protein [Monosiga brevicollis MX1]
Length = 206
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 152/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K+LV+GE+G GKTSIIKRYVHQ FS HY+ATIGVDFALKVL+ D +TI+RLQLWD
Sbjct: 8 KEHLFKVLVVGEIGTGKTSIIKRYVHQMFSSHYKATIGVDFALKVLNLDDDTIVRLQLWD 67
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAFIVFDVTR +TF+AV KWK D+D KV LPDG+ IP VLL
Sbjct: 68 IAGQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVQKWKSDIDNKVFLPDGSKIPVVLL 127
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCD KEG+ N A +D++ +E F+GWFETSAK+N+NID AA+ LV+KILE++
Sbjct: 128 ANKCDMAKEGLVKNGAAMDKYCEEKGFAGWFETSAKENVNIDLAAQELVKKILEHE 183
>gi|109108201|ref|XP_001104269.1| PREDICTED: ras-related protein Rab-38 [Macaca mulatta]
gi|402894879|ref|XP_003910569.1| PREDICTED: ras-related protein Rab-38 [Papio anubis]
gi|355566930|gb|EHH23309.1| hypothetical protein EGK_06752 [Macaca mulatta]
Length = 211
Score = 284 bits (727), Expect = 1e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|21105857|ref|NP_082514.4| ras-related protein Rab-38 [Mus musculus]
gi|46577080|sp|Q8QZZ8.1|RAB38_MOUSE RecName: Full=Ras-related protein Rab-38
gi|20087023|gb|AAL38663.1| RAB38 [Mus musculus]
gi|20147508|gb|AAM12528.1| RAB38 [Mus musculus]
gi|26336811|dbj|BAC32089.1| unnamed protein product [Mus musculus]
gi|26344095|dbj|BAC35704.1| unnamed protein product [Mus musculus]
gi|58476762|gb|AAH89578.1| RAB38, member of RAS oncogene family [Mus musculus]
gi|74227083|dbj|BAE38335.1| unnamed protein product [Mus musculus]
gi|112293037|dbj|BAF02896.1| Rab38 [Mus musculus]
gi|148674846|gb|EDL06793.1| Rab38, member of RAS oncogene family [Mus musculus]
Length = 211
Score = 284 bits (726), Expect = 1e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|351696045|gb|EHA98963.1| Ras-related protein Rab-32 [Heterocephalus glaber]
Length = 209
Score = 284 bits (726), Expect = 1e-73, Method: Composition-based stats.
Identities = 130/180 (72%), Positives = 155/180 (86%), Gaps = 1/180 (0%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+++LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVLSWD T++RLQLWDIAGQ
Sbjct: 10 FRVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLSWDSRTLVRLQLWDIAGQ 69
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP G+PIP VLLANKC
Sbjct: 70 ERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKNDLDSKVHLPSGSPIPTVLLANKC 129
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
DQ ++ +NP+++D+F K+H FSGWFETSA+DNINI++AA LV+ IL N K + DS
Sbjct: 130 DQSRDS-GHNPSQMDQFCKDHGFSGWFETSARDNINIEEAAHLLVENILANCKNFPSEDS 188
>gi|403287827|ref|XP_003935127.1| PREDICTED: ras-related protein Rab-38 [Saimiri boliviensis
boliviensis]
Length = 211
Score = 283 bits (725), Expect = 1e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|348565725|ref|XP_003468653.1| PREDICTED: ras-related protein Rab-38-like [Cavia porcellus]
Length = 211
Score = 283 bits (725), Expect = 2e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLINNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|33150768|gb|AAP97262.1|AF136172_1 rab-related GTP-binding protein [Homo sapiens]
Length = 212
Score = 283 bits (724), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|149719243|ref|XP_001489548.1| PREDICTED: ras-related protein Rab-38-like [Equus caballus]
Length = 211
Score = 283 bits (724), Expect = 2e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLQWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G PI VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPISVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|426370059|ref|XP_004051994.1| PREDICTED: ras-related protein Rab-38 [Gorilla gorilla gorilla]
Length = 211
Score = 283 bits (724), Expect = 2e-73, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|11641237|ref|NP_071732.1| ras-related protein Rab-38 [Homo sapiens]
gi|114639714|ref|XP_508683.2| PREDICTED: ras-related protein Rab-38 [Pan troglodytes]
gi|297689915|ref|XP_002822380.1| PREDICTED: ras-related protein Rab-38 [Pongo abelii]
gi|397526221|ref|XP_003833034.1| PREDICTED: ras-related protein Rab-38 [Pan paniscus]
gi|12230516|sp|P57729.1|RAB38_HUMAN RecName: Full=Ras-related protein Rab-38; AltName: Full=Melanoma
antigen NY-MEL-1
gi|11119734|gb|AAG30731.1| Rab-related GTP-binding protein [Homo sapiens]
gi|16041835|gb|AAH15808.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|32880027|gb|AAP88844.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|61360935|gb|AAX41956.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360941|gb|AAX41957.1| RAB38 member RAS oncogene family [synthetic construct]
gi|61360949|gb|AAX41958.1| RAB38 member RAS oncogene family [synthetic construct]
gi|74418830|gb|ABA03166.1| RAB38, member RAS oncogene family [Homo sapiens]
gi|119579769|gb|EAW59365.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119579770|gb|EAW59366.1| RAB38, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123980446|gb|ABM82052.1| RAB38, member RAS oncogene family [synthetic construct]
gi|123995259|gb|ABM85231.1| RAB38, member RAS oncogene family [synthetic construct]
gi|410255632|gb|JAA15783.1| RAB38, member RAS oncogene family [Pan troglodytes]
gi|410332977|gb|JAA35435.1| RAB38, member RAS oncogene family [Pan troglodytes]
Length = 211
Score = 283 bits (723), Expect = 3e-73, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|291384118|ref|XP_002708691.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 211
Score = 283 bits (723), Expect = 3e-73, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQAKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|350588369|ref|XP_003482633.1| PREDICTED: ras-related protein Rab-38-like [Sus scrofa]
Length = 211
Score = 282 bits (721), Expect = 5e-73, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>gi|431838500|gb|ELK00432.1| Ras-related protein Rab-38 [Pteropus alecto]
Length = 211
Score = 281 bits (720), Expect = 6e-73, Method: Composition-based stats.
Identities = 132/181 (72%), Positives = 156/181 (86%), Gaps = 1/181 (0%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ P+K E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++R
Sbjct: 2 QAPNK-EHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVR 60
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+
Sbjct: 61 LQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPV 120
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VLLANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N
Sbjct: 121 SVVLLANKCDQGKDMLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILAN 180
Query: 630 D 630
+
Sbjct: 181 E 181
>gi|130502148|ref|NP_001076317.1| uncharacterized protein LOC565931 [Danio rerio]
gi|126631826|gb|AAI33897.1| Zgc:162171 protein [Danio rerio]
Length = 224
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 160/210 (76%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WDH T++RLQLW
Sbjct: 2 QQERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA +VFD+TRA+TF AVLKWK+DLD+KV L +G P+P VL
Sbjct: 62 DIAGQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCDQ + G+ + K++ F ++H F GW+ETSAKDN NID A LV+ I+ ++
Sbjct: 122 LANKCDQQRYGLCSKLPKLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMAVEEEN 181
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+S + + + + N +E + R C
Sbjct: 182 VPVESDPSVLILPAFDYNLKERSDSRCSVC 211
>gi|12844005|dbj|BAB26198.1| unnamed protein product [Mus musculus]
Length = 211
Score = 273 bits (698), Expect = 2e-70, Method: Composition-based stats.
Identities = 127/176 (72%), Positives = 149/176 (84%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F K+ F GWFETSA+ NINID+A++ Q IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKDDGFVGWFETSAQRNINIDEASRCRGQHILANE 181
>gi|348533005|ref|XP_003453996.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 230
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 153/191 (80%), Gaps = 2/191 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE L K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WDH+T++RLQLW
Sbjct: 2 QRERLLKVLVIGDLGVGKTSIIKRYVHQVFSQHYRATIGVDFALKVLNWDHKTVVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA +VFD+TR +TF A+LKWK DLD+KV L +G P+P VL
Sbjct: 62 DIAGQERYGNMTRVYYREAVGALVVFDMTRLSTFQAILKWKGDLDSKVALSNGRPVPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCDQ + G+ K++ F KE+ F W+ETSAKDN NID A LV+ I+ ++ +
Sbjct: 122 LANKCDQRRHGLCPKLPKLENFSKEYGFVDWYETSAKDNTNIDAAITCLVKSIMSVEEER 181
Query: 634 ANGDSHATSEA 644
A G+ ATS A
Sbjct: 182 ALGE--ATSGA 190
>gi|198413093|ref|XP_002130668.1| PREDICTED: similar to RAB32, member RAS oncogene family [Ciona
intestinalis]
Length = 208
Score = 272 bits (696), Expect = 3e-70, Method: Composition-based stats.
Identities = 127/178 (71%), Positives = 149/178 (83%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E+L+K+LVIGELG GKTS+IKRYVHQ FS HYRATIGVDFALKV+ WD ET+IRLQLW
Sbjct: 5 RKEYLFKVLVIGELGVGKTSVIKRYVHQIFSQHYRATIGVDFALKVVHWDGETLIRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EAVGAFIVFD TRA+TF+AV KWK DLD KVTLPDG IP VL
Sbjct: 65 DIAGQERFGNMTRVYYREAVGAFIVFDATRASTFEAVNKWKNDLDNKVTLPDGRNIPTVL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
L NK DQ + G+ +N ++D + E F WFETSAK NINID+AAK L+ KIL+N++
Sbjct: 125 LGNKIDQMRGGLLSNKQQMDNYCDEKGFVAWFETSAKANINIDEAAKYLIDKILDNER 182
>gi|328794038|ref|XP_003251968.1| PREDICTED: ras-related protein Rab-32-like, partial [Apis
mellifera]
Length = 161
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/185 (69%), Positives = 146/185 (78%), Gaps = 24/185 (12%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
SS+ SP + + +KRE LYKILVIGELGAGKTSIIKRYVHQFFS HYRATIG
Sbjct: 1 SSQNNSPNAGLGEKREHLYKILVIGELGAGKTSIIKRYVHQFFSQHYRATIG-------- 52
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
GQERFGNMTRVYYKEAVGAFIVFDVTR+AT DAV+KWKQDLD+K
Sbjct: 53 ----------------GQERFGNMTRVYYKEAVGAFIVFDVTRSATLDAVVKWKQDLDSK 96
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
V LPDG+PIPCVLLANKCDQ KEG+ N+PAK+DE+ KE NF+GWFETSAK+NINI++AA+
Sbjct: 97 VQLPDGSPIPCVLLANKCDQQKEGLVNSPAKMDEYCKEKNFAGWFETSAKENINIEEAAR 156
Query: 621 TLVQK 625
LV K
Sbjct: 157 FLVNK 161
>gi|189534008|ref|XP_690992.3| PREDICTED: ras-related protein Rab-38-like [Danio rerio]
Length = 213
Score = 271 bits (693), Expect = 8e-70, Method: Composition-based stats.
Identities = 132/210 (62%), Positives = 162/210 (77%), Gaps = 1/210 (0%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD +T++RLQLW
Sbjct: 2 QKEHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQTVVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA IVFDVTR++TFDAVLKWK DLD KV+L +G P+P VL
Sbjct: 62 DIAGQERYGNMTRVYYREAVGALIVFDVTRSSTFDAVLKWKDDLDLKVSLNNGKPVPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANK DQ +EG+ + K+D F KE+ F GWFETSAK+N NI+ AAK LV IL +++
Sbjct: 122 LANKSDQSREGLCSQIPKLDTFCKENGFVGWFETSAKENSNIEAAAKCLVDHILAHEENI 181
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
N ++ A+ N N++E R C
Sbjct: 182 VN-NTDPDVVALPGYNNNTKERVRSRCMTC 210
>gi|440801165|gb|ELR22187.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 271 bits (693), Expect = 9e-70, Method: Composition-based stats.
Identities = 130/181 (71%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYK+LV+G++G GKTSIIKRYVH FS HY++TIGVDFALKV++WD +TI+RLQLWDI
Sbjct: 11 EYLYKVLVVGDIGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVINWDPKTIVRLQLWDI 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFGNMTRVYYKEAVGAF+VFDVTR TF+AV KWK D+D KVTL PD PIP VLL
Sbjct: 71 AGQERFGNMTRVYYKEAVGAFVVFDVTRVNTFEAVQKWKNDIDNKVTLPPDDRPIPVVLL 130
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD KEG A N A++D++ +EH F+GW ETSAK+NINID A K LV KILEND +
Sbjct: 131 ANKCDLAKEGFARNAAQMDKYCEEHGFAGWEETSAKENINIDKAVKFLVSKILENDINRQ 190
Query: 635 N 635
N
Sbjct: 191 N 191
>gi|291408137|ref|XP_002720314.1| PREDICTED: RAB38 [Oryctolagus cuniculus]
Length = 210
Score = 270 bits (691), Expect = 1e-69, Method: Composition-based stats.
Identities = 127/175 (72%), Positives = 149/175 (85%), Gaps = 1/175 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E ++LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWDI
Sbjct: 7 EVAVQLLVIGDLGVGKTSIIKRYVHQNFS-HYRATIGVDFALKVLHWDPETVVRLQLWDI 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERFGNMTRVYY+E +GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLLA
Sbjct: 66 AGQERFGNMTRVYYREVMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLA 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
NKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 NKCDQAKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRYLVKHILANE 180
>gi|345329240|ref|XP_003431352.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32-like
[Ornithorhynchus anatinus]
Length = 217
Score = 270 bits (690), Expect = 2e-69, Method: Composition-based stats.
Identities = 128/188 (68%), Positives = 156/188 (82%), Gaps = 1/188 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P+ RE L+K+LVIGELG GK +IKRYVHQ FS YRATIGVDFALKV WD+ T++RL
Sbjct: 10 VPEVREHLFKVLVIGELGVGKILMIKRYVHQLFSQLYRATIGVDFALKVFHWDNATLVRL 69
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQERFGNMTRVYYKEAVGAF+VFD++R +TF+AV KWK DLD+KV LP+G+ IP
Sbjct: 70 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVSKWKNDLDSKVQLPNGSAIP 129
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VLLANKCDQ K+ N +++D+F KE+ FSGWFETSAKDNINI++AA+ LV+KIL N
Sbjct: 130 AVLLANKCDQKKDS-GQNLSQMDQFCKENGFSGWFETSAKDNINIEEAARFLVEKILANY 188
Query: 631 KVQANGDS 638
+ N D+
Sbjct: 189 QSLPNEDN 196
>gi|391343988|ref|XP_003746287.1| PREDICTED: ras-related protein Rab-32-like [Metaseiulus
occidentalis]
Length = 245
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 151/200 (75%), Gaps = 7/200 (3%)
Query: 446 SPYSKM------PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
PY ++ D R+FLYK+LVIGELG GKTSII+RYVH+ +S HYRATIGVDFALKV
Sbjct: 44 GPYYRIEMATPAADPRDFLYKVLVIGELGTGKTSIIRRYVHKAYSEHYRATIGVDFALKV 103
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
+ WD T++RLQLWDIAGQERFGNMTRVY+KEAVGAFIVFDVTR ATF+AVLKWK DLDA
Sbjct: 104 IQWDENTVVRLQLWDIAGQERFGNMTRVYFKEAVGAFIVFDVTRGATFEAVLKWKNDLDA 163
Query: 560 KVTLPDGNPIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA 618
KV L DG+PIPCVLLANKCD K +GI + +NF W+ TSAK + NID+A
Sbjct: 164 KVHLADGSPIPCVLLANKCDLDKGDGIXXXXXXXXXXCETNNFHSWYLTSAKTDTNIDEA 223
Query: 619 AKTLVQKILENDKVQANGDS 638
A+ L ++L ++ + D+
Sbjct: 224 ARDLANEVLRRQQIIKSNDT 243
>gi|410915796|ref|XP_003971373.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 208
Score = 268 bits (686), Expect = 5e-69, Method: Composition-based stats.
Identities = 127/183 (69%), Positives = 154/183 (84%), Gaps = 4/183 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYK+LVIG+LG GKTSII+RYVHQ +S +YRATIGVDFALKVL+WD ET+ RLQLW
Sbjct: 5 RKEHLYKVLVIGDLGVGKTSIIRRYVHQTYSNNYRATIGVDFALKVLNWDSETV-RLQLW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR TF+AV KWK+DLD+K+ L DG I VL
Sbjct: 64 DIAGQERFGNMTRVYYREAMGAFIVFDVTRHTTFEAVAKWKEDLDSKLMLADGQSIATVL 123
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ +E +ANN K+D+F K+H F GWFETSAKDN+NI DAA LV+ ++ END
Sbjct: 124 LANKCDQGRE-LANNAIKMDQFCKDHGFVGWFETSAKDNLNISDAANFLVKHMMAAENDI 182
Query: 632 VQA 634
+++
Sbjct: 183 LKS 185
>gi|351701471|gb|EHB04390.1| Ras-related protein Rab-38 [Heterocephalus glaber]
Length = 176
Score = 268 bits (685), Expect = 7e-69, Method: Composition-based stats.
Identities = 121/158 (76%), Positives = 138/158 (87%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
ANKCDQ K+ + NN K+D+F KEH F GWFETSAKD+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKDS 163
>gi|348519068|ref|XP_003447053.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 207
Score = 266 bits (681), Expect = 2e-68, Method: Composition-based stats.
Identities = 124/178 (69%), Positives = 148/178 (83%), Gaps = 4/178 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD T+IRLQLW
Sbjct: 2 QQELLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLQWDSNTVIRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA +VFDVTRA+TFDAVLKWK DLD+KVTL G P+P VL
Sbjct: 62 DIAGQERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLNHGRPVPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LANK DQ + + K+D F +E+ F GWFETSAK+N NI++AA+ LV+ IL N++
Sbjct: 122 LANKSDQ----LVSQQPKLDAFCRENGFVGWFETSAKENTNIEEAARCLVEHILRNEE 175
>gi|432896162|ref|XP_004076289.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 207
Score = 266 bits (681), Expect = 2e-68, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 160/209 (76%), Gaps = 8/209 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++EFL+K+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDF LKVL WD++ ++RLQLW
Sbjct: 3 QQEFLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFVLKVLQWDNDRVVRLQLW 62
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYY+EAVGA +VFDVTRA+TFDAVLKWK DLD+KVTL G P+P VL
Sbjct: 63 DIAGQERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLSHGRPVPAVL 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANK DQ +A+ K+D F +E+ F GWF TSAKDN NI++AA+ LV+ IL N++
Sbjct: 123 LANKSDQ----MASQVPKLDSFCRENGFVGWFGTSAKDNTNIEEAARCLVEHILTNEESP 178
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCA 662
A + L+ ++ TKN C+
Sbjct: 179 AAERESGS----LILSGHTNTTKNHFRCS 203
>gi|196009291|ref|XP_002114511.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
gi|190583530|gb|EDV23601.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
Length = 184
Score = 266 bits (680), Expect = 3e-68, Method: Composition-based stats.
Identities = 124/175 (70%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW-DHETIIRLQL 512
K+E+LYKILVIG+LG GKTSIIKRYVHQFFS YRATIGVDFALKV+ W D +++RLQL
Sbjct: 6 KKEYLYKILVIGDLGVGKTSIIKRYVHQFFSTQYRATIGVDFALKVIDWKDSNSVVRLQL 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EAVGAFIVFD++RA+TFDAV KWK DLD+KVT+ + IP V
Sbjct: 66 WDIAGQERFGNMTRVYYREAVGAFIVFDISRASTFDAVQKWKSDLDSKVTIGEDMAIPVV 125
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
LLANKCD E +AN +D + KE F+GWFETSAK+NINID+AA LV K+
Sbjct: 126 LLANKCDIDMESLANFRGTLDNYCKEKGFAGWFETSAKENINIDEAANFLVSKVF 180
>gi|189529263|ref|XP_001342875.2| PREDICTED: ras-related protein Rab-38 [Danio rerio]
Length = 211
Score = 266 bits (679), Expect = 4e-68, Method: Composition-based stats.
Identities = 132/211 (62%), Positives = 165/211 (78%), Gaps = 11/211 (5%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYKILVIG+LG GKTSIIKRYVHQ FSP+YRATIGVDFALKVL+ D ET+ RLQLWD
Sbjct: 7 KEHLYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETV-RLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR +TF+AV KWK+DLDAK++L +G + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKV 632
ANKCDQ ++ + NN K+++F +E+ F GWFETSAK+NINID+AA LV+ I+ END +
Sbjct: 126 ANKCDQGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANENDLL 185
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
Q SE +++ + ++ G AC
Sbjct: 186 Q--------SEVADTISPQQESSRGGTCSAC 208
>gi|410906851|ref|XP_003966905.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 225
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/217 (58%), Positives = 155/217 (71%), Gaps = 7/217 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E L K+LVIG++G GKTSII RYVHQ FS HYRATIGVDFALKVL+WDH+T++RLQLW
Sbjct: 2 QHERLLKVLVIGDIGVGKTSIITRYVHQVFSQHYRATIGVDFALKVLNWDHKTVVRLQLW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQER+GNMTRVYYKEAVGA +VFD+TR +TF AVLKWK DLD+KV L +G +P VL
Sbjct: 62 DIAGQERYGNMTRVYYKEAVGALVVFDMTRLSTFQAVLKWKGDLDSKVALGNGRTVPAVL 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL----EN 629
LANKCDQ G+ K++ F +E+ F GW+ETSAKD+ NID A LV+ I+ E+
Sbjct: 122 LANKCDQRDHGLCPKLPKLESFSREYGFIGWYETSAKDDTNIDAAITCLVKSIMSLEEES 181
Query: 630 DKVQANGDSHATSEAVFSL---NRNSQETKNGRNCAC 663
A G +H +V L N + +E G C
Sbjct: 182 ATADAAGANHEPDNSVLVLPQFNYSRKERGLGGCSGC 218
>gi|47227097|emb|CAG00459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 264 bits (674), Expect = 1e-67, Method: Composition-based stats.
Identities = 124/183 (67%), Positives = 154/183 (84%), Gaps = 4/183 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+K+LVIG+LG GKTSII+RYVHQ +S +YRATIGVDFA+KVL+WD ET+ RLQLW
Sbjct: 15 RKEHLFKVLVIGDLGVGKTSIIRRYVHQAYSNNYRATIGVDFAMKVLNWDSETV-RLQLW 73
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR TF+AV KWK+DLD+K+ L DG I VL
Sbjct: 74 DIAGQERFGNMTRVYYREAMGAFIVFDVTRHTTFEAVTKWKEDLDSKLMLADGQSIAMVL 133
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ +E + NN K+D+F K+H F GWFETSAKDN+NI+DAA LV+ ++ END
Sbjct: 134 LANKCDQGRE-LTNNAIKMDQFCKDHGFLGWFETSAKDNLNINDAANFLVKHMMATENDI 192
Query: 632 VQA 634
+++
Sbjct: 193 LRS 195
>gi|152012618|gb|AAI50366.1| LOC100003274 protein [Danio rerio]
Length = 202
Score = 263 bits (672), Expect = 3e-67, Method: Composition-based stats.
Identities = 131/208 (62%), Positives = 163/208 (78%), Gaps = 11/208 (5%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYKILVIG+LG GKTSIIKRYVHQ FSP+YRATIGVDFALKVL+ D ET+ RLQLWDIAG
Sbjct: 1 LYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETV-RLQLWDIAG 59
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERFGNMTRVYY+EA+GAFIVFDVTR +TF+AV KWK+DLDAK++L +G + VLLANK
Sbjct: 60 QERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLANK 119
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKVQAN 635
CDQ ++ + NN K+++F +E+ F GWFETSAK+NINID+AA LV+ I+ END +Q
Sbjct: 120 CDQGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANENDLLQ-- 177
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
SE +++ + ++ G AC
Sbjct: 178 ------SEVADTISPQQESSRGGTCSAC 199
>gi|432892465|ref|XP_004075794.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 212
Score = 263 bits (671), Expect = 3e-67, Method: Composition-based stats.
Identities = 128/182 (70%), Positives = 155/182 (85%), Gaps = 3/182 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYKILVIG+LG GKTSIIKRYVH FSP+YRATIGVDFALKVL+W+ ET+ RLQLWD
Sbjct: 7 KERLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWEQETV-RLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR A+F+AV KWK+DLD+KVTL +G + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPASFEAVTKWKEDLDSKVTLSNGKHVATVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKV 632
ANKCDQ ++ + NN K+D+F +E+ F GWFETSAK+NINID+AA LV+ I+ END +
Sbjct: 126 ANKCDQGQDVLTNNGIKMDQFCQENGFVGWFETSAKENINIDEAANCLVKHIISSENDML 185
Query: 633 QA 634
Q+
Sbjct: 186 QS 187
>gi|410909794|ref|XP_003968375.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 212
Score = 262 bits (670), Expect = 4e-67, Method: Composition-based stats.
Identities = 127/182 (69%), Positives = 153/182 (84%), Gaps = 3/182 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYKILVIG+LG GKTSIIKRYVH FSP+YRATIGVDFALKVL+WD ET+ RLQLW
Sbjct: 6 QKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQETV-RLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR A+F+AV KWK+DLD+KVTL +G I +L
Sbjct: 65 DIAGQERFGNMTRVYYREAMGAFIVFDVTRPASFEAVTKWKEDLDSKVTLANGKHIATLL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ + + NN K+D+F +++ F GW+ETSAK+NINID+AA LV+ I+ E D
Sbjct: 125 LANKCDQDNDVLTNNGIKMDQFCQDNGFVGWYETSAKENINIDEAANCLVKHIIASEKDM 184
Query: 632 VQ 633
VQ
Sbjct: 185 VQ 186
>gi|348508308|ref|XP_003441696.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 212
Score = 262 bits (669), Expect = 5e-67, Method: Composition-based stats.
Identities = 123/177 (69%), Positives = 152/177 (85%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYKILVIG+LG GKTSIIKRYVH FSP+YRATIGVDFALKVL+WD ET+ RLQLWD
Sbjct: 7 KEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQETV-RLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR A+F+AV KWK+DLD+K+TL +G + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPASFEAVTKWKEDLDSKLTLANGKHVATVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ ++ + NN K+++F +E+ F GW+ETSAK+NINID+AA LV+ I+ ++K
Sbjct: 126 ANKCDQGRDVLTNNGIKMEQFCQENGFVGWYETSAKENINIDEAANCLVKHIIASEK 182
>gi|290983359|ref|XP_002674396.1| rab family small GTPase [Naegleria gruberi]
gi|284087986|gb|EFC41652.1| rab family small GTPase [Naegleria gruberi]
Length = 221
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 146/175 (83%), Gaps = 1/175 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+LYKILV+G++G GKTSIIKRYVH FS Y++TIGVDFALKVL+WD IIRLQLWD
Sbjct: 9 QEYLYKILVVGDIGTGKTSIIKRYVHNIFSNTYKSTIGVDFALKVLNWDDNIIIRLQLWD 68
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFG+MTRVYYKEAVGAF+V+D+TR TF+AV KWK D++ KV LPD PIPCVLL
Sbjct: 69 IAGQERFGSMTRVYYKEAVGAFVVYDITRPPTFEAVQKWKSDIEHKVFLPDERPIPCVLL 128
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD P ++ + ++D++ +E+ F GWFETSAKD+ NI++AA LV+KILEN
Sbjct: 129 ANKCDLPS-AVSKSKEEMDQYCQENGFIGWFETSAKDDKNINEAANFLVKKILEN 182
>gi|391336000|ref|XP_003742372.1| PREDICTED: ras-related protein Rab-32-like [Metaseiulus
occidentalis]
Length = 216
Score = 260 bits (665), Expect = 1e-66, Method: Composition-based stats.
Identities = 122/198 (61%), Positives = 152/198 (76%), Gaps = 3/198 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D R+FL+K+LVIGE G GKT+II+RYVH+ +S HYR TIGVDFALKV+ WD T++RLQL
Sbjct: 7 DPRDFLFKVLVIGEWGTGKTNIIRRYVHKAYSEHYRPTIGVDFALKVIQWDENTVVRLQL 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVY+K+AVGAFIVFDVTR ATF+AVLKWK DLDAK L DG+PIPCV
Sbjct: 67 WDIAGQERFGNMTRVYFKQAVGAFIVFDVTRGATFEAVLKWKNDLDAKAHLADGSPIPCV 126
Query: 573 LLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LLANKCD K +GI+ AK+ F + +NF W+ TSAK + NID+AA+ L ++L +
Sbjct: 127 LLANKCDLDKGDGISQ--AKMKHFCETNNFHSWYLTSAKTDTNIDEAARDLANEVLRRQQ 184
Query: 632 VQANGDSHATSEAVFSLN 649
+ + +E +LN
Sbjct: 185 IVECRAAIIAAENTMALN 202
>gi|348518836|ref|XP_003446937.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 208
Score = 260 bits (664), Expect = 2e-66, Method: Composition-based stats.
Identities = 124/179 (69%), Positives = 150/179 (83%), Gaps = 4/179 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYK+LVIG+LG GKTSII+RYVH +S +YRATIGVDFALKVL+WD ET+ RLQLW
Sbjct: 5 RKEHLYKVLVIGDLGVGKTSIIRRYVHHTYSTNYRATIGVDFALKVLNWDSETV-RLQLW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR TF+AV+KWK+DLD+K+ L +G I VL
Sbjct: 64 DIAGQERFGNMTRVYYREAMGAFIVFDVTRPTTFEAVVKWKEDLDSKLMLANGKSIATVL 123
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LANKCDQ +E + NN K+D+F K+H F GWFETSAKDN+NI +AA LV+ I+ END
Sbjct: 124 LANKCDQGRE-LTNNGIKMDQFCKDHGFVGWFETSAKDNLNISEAANFLVKHIMATEND 181
>gi|326671255|ref|XP_003199402.1| PREDICTED: ras-related protein Rab-38-like [Danio rerio]
Length = 210
Score = 259 bits (662), Expect = 3e-66, Method: Composition-based stats.
Identities = 131/206 (63%), Positives = 160/206 (77%), Gaps = 13/206 (6%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++E LYKILVIG+LG GKTSIIKRYVHQ +S +YRATIGVDFALKVL+WD ET+ RLQL
Sbjct: 4 NQKEHLYKILVIGDLGVGKTSIIKRYVHQTYSTNYRATIGVDFALKVLNWDSETV-RLQL 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK+DLD+K+ L +G I V
Sbjct: 63 WDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVSKWKEDLDSKLILSNGQSIATV 122
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--END 630
LLANKCDQ ++ + NN K+D++ +E+ F GWFETSAK+N+NI+DAA LV+ I+ END
Sbjct: 123 LLANKCDQNRDFLTNNGLKMDQYCRENGFVGWFETSAKENVNINDAANFLVKHIIASEND 182
Query: 631 KV----------QANGDSHATSEAVF 646
+ Q N D T A F
Sbjct: 183 ILKSVVPDTISPQLNSDKEITCSACF 208
>gi|320167989|gb|EFW44888.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 210
Score = 258 bits (659), Expect = 8e-66, Method: Composition-based stats.
Identities = 120/179 (67%), Positives = 149/179 (83%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+ +E+L+K+LV+G++G GKTSIIKRYVH FS HY+ATIGVDFALKV++W+ +T++RLQL
Sbjct: 4 EMKEYLFKVLVVGDIGTGKTSIIKRYVHNIFSMHYKATIGVDFALKVINWEPDTVVRLQL 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFGNMTRVYYKEAV A IVFDVTR +TF+AV KWK D+DAKV L G IP V
Sbjct: 64 WDIAGQERFGNMTRVYYKEAVAAIIVFDVTRVSTFEAVQKWKFDIDAKVKLSTGEDIPVV 123
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LLANKCD KEG+ N A++D+F ++ F+GWFETSAK+N+NID A + LV KILEN +
Sbjct: 124 LLANKCDLAKEGLVKNSAQMDKFCEDKGFAGWFETSAKENLNIDKACRFLVTKILENTQ 182
>gi|432896027|ref|XP_004076264.1| PREDICTED: ras-related protein Rab-38-like [Oryzias latipes]
Length = 218
Score = 258 bits (659), Expect = 8e-66, Method: Composition-based stats.
Identities = 122/183 (66%), Positives = 154/183 (84%), Gaps = 4/183 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYK+LVIG+LG GKTSII+RYVHQ +S +YRATIGVDFALKVL+WD ET+ RLQLW
Sbjct: 15 QKEHLYKVLVIGDLGVGKTSIIRRYVHQTYSTNYRATIGVDFALKVLNWDSETV-RLQLW 73
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFGNMTRVYY+EA+GAFIVFDVTR TF+AVLKWK+DLD+K L +G+ I VL
Sbjct: 74 DIAGQERFGNMTRVYYREAMGAFIVFDVTRPTTFEAVLKWKEDLDSKAMLANGSSIATVL 133
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDK 631
LANKCDQ ++ + NN K+D+F K+H F GWFETSAKDN+N+ +AA L++ ++ END
Sbjct: 134 LANKCDQIRD-LTNNGLKMDQFCKDHGFIGWFETSAKDNLNLKEAANFLIKHMMATENDI 192
Query: 632 VQA 634
+++
Sbjct: 193 LKS 195
>gi|281200842|gb|EFA75058.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 250
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 153/194 (78%), Gaps = 3/194 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQL
Sbjct: 9 DYTEYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQL 68
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPC 571
WDIAGQERFG+MTRVYYKEAVGA I FDVTRA+TF+AV KWK D+D+KVT+ P+ PIP
Sbjct: 69 WDIAGQERFGSMTRVYYKEAVGAMITFDVTRASTFEAVSKWKADIDSKVTIGPEEKPIPV 128
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND- 630
VLLANKCD KEG ++D++ K++ F GWFETSAK+N+NI+ AA+ LV+ IL+ D
Sbjct: 129 VLLANKCDLGKEGFIKTANEMDKYCKDNGFIGWFETSAKENLNIEKAARFLVEHILKMDI 188
Query: 631 -KVQANGDSHATSE 643
+ Q G H E
Sbjct: 189 RRNQPKGIVHPGEE 202
>gi|328871008|gb|EGG19380.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 215
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 146/176 (82%), Gaps = 1/176 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKVL+WD T +RLQLWDI
Sbjct: 11 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVLNWDPRTEVRLQLWDI 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTRA+TF+AV KWK D+D+KVT+ + PIP VLL
Sbjct: 71 AGQERFGSMTRVYYKEAVGAMITFDVTRASTFEAVSKWKADIDSKVTIGAEEKPIPVVLL 130
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCD KEG ++D++ K++ F GWFETSAK+N+NI+ AA+ LV+ IL++D
Sbjct: 131 ANKCDLGKEGFIKTANEMDKYCKDNGFIGWFETSAKENLNIEKAARFLVEHILKSD 186
>gi|330791341|ref|XP_003283752.1| Rab GTPase [Dictyostelium purpureum]
gi|325086375|gb|EGC39766.1| Rab GTPase [Dictyostelium purpureum]
Length = 218
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 157/210 (74%), Gaps = 8/210 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTR +TF+AV KWK D+D+KVT P+ PIP VLL
Sbjct: 73 AGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGPEEKPIPVVLL 132
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND--KV 632
ANKCD K+ +D++ K++ F GWFETSAK+N+NI+ AA+ LV IL+ND +
Sbjct: 133 ANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKNDIRRN 192
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCA 662
Q D+ A LN+ Q T +G +C
Sbjct: 193 QPLQDNDAV-----DLNKQPQATPSGPSCC 217
>gi|66810506|ref|XP_638960.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897084|sp|Q54QR3.1|RB32A_DICDI RecName: Full=Ras-related protein Rab-32A
gi|60467547|gb|EAL65568.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 219
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTR +TF+AV KWK D+D+KVT D PIP VLL
Sbjct: 73 AGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLL 132
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD K+ +D++ K++ F GWFETSAK+N+NI+ AA+ LV IL+ND V+
Sbjct: 133 ANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKND-VRR 191
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
N T + LN+ Q T G +C
Sbjct: 192 NQPIEGTIQPG-DLNKQPQPTSTGPSCC 218
>gi|4566765|gb|AAD23450.1|AF116859_1 small GTPase rabE [Dictyostelium discoideum]
Length = 228
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQLWDI
Sbjct: 22 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 81
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTR +TF+AV KWK D+D+KVT D PIP VLL
Sbjct: 82 AGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD K+ +D++ K++ F GWFETSAK+N+NI+ AA+ LV IL+ND V+
Sbjct: 142 ANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKND-VRR 200
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
N T + LN+ Q T G +C
Sbjct: 201 NQPIEGTIQPG-DLNKQPQPTSTGPSCC 227
>gi|384496458|gb|EIE86949.1| hypothetical protein RO3G_11660 [Rhizopus delemar RA 99-880]
Length = 212
Score = 249 bits (637), Expect = 3e-63, Method: Composition-based stats.
Identities = 116/190 (61%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE+LYKILV+G+LG GKTSII+RYVH FS +Y++TIGVDFALKV+ W + I+RLQLWD
Sbjct: 2 REYLYKILVVGDLGTGKTSIIRRYVHNIFSTNYKSTIGVDFALKVIQWGPDIIVRLQLWD 61
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD---GNPIPC 571
IAGQERFGNMTRVYYKEA+GA +V+D+TR TF+ V KWK+D+DAKV LP+ G IP
Sbjct: 62 IAGQERFGNMTRVYYKEALGAIVVYDITRPQTFEGVTKWKRDIDAKVALPEAWGGGQIPV 121
Query: 572 VLLANKCDQPKEGIAN--NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LLANK D +EG NPA++D F KE+ F WFETSAKDN NI++A ++L+ I+E
Sbjct: 122 ILLANKTDLIQEGHGQHANPAELDHFCKENGFIQWFETSAKDNSNIEEATRSLISAIVEL 181
Query: 630 DKVQANGDSH 639
+ N D+H
Sbjct: 182 QQENVNNDNH 191
>gi|440804116|gb|ELR24994.1| lightoid family protein [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 140/174 (80%), Gaps = 9/174 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYK+LV+G++G GKT+II+RYV+ +S Y++TIGVDFALK ++WD +T++RLQLWDI
Sbjct: 8 EYLYKVLVVGDMGTGKTAIIRRYVNNMYSDSYKSTIGVDFALKEINWDSKTLVRLQLWDI 67
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+GNMTRVYYKEAVGAF+VFD+TR ++F+AV KWKQD+D+KVTL D PIP VLLA
Sbjct: 68 AGQERYGNMTRVYYKEAVGAFVVFDITRNSSFEAVKKWKQDIDSKVTLHD-QPIPVVLLA 126
Query: 576 NKCDQPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD K NP ++E+ +EH F+ WF TSAK+N+N+D+A LV I
Sbjct: 127 NKCDLVK-----NPCNEEVMNEYCREHGFAAWFTTSAKENVNVDEAVTALVSAI 175
>gi|348559734|ref|XP_003465670.1| PREDICTED: ras-related protein Rab-32-like [Cavia porcellus]
Length = 221
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 142/183 (77%), Gaps = 4/183 (2%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S PD RE L+K+LV+GELG GKTSIIKRYVH+ FS HYRATIGVDFALK L+WD T++
Sbjct: 15 SAAPDTREHLFKVLVVGELGVGKTSIIKRYVHKLFSQHYRATIGVDFALKALNWDSRTLV 74
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQLWDIAG+ F +T +YY +++ + + D T +FD+ KWK DLD+KV L +G+P
Sbjct: 75 RLQLWDIAGKRSFNVLTWIYYADSLASTVSKDST---SFDSSDKWKNDLDSKVHLHNGSP 131
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLAN CDQ K+ +NP+++D+F K+H FSGWFETSAKDNINID+AA+ LV+ IL
Sbjct: 132 IPAVLLANICDQNKDS-GHNPSQMDQFCKDHGFSGWFETSAKDNINIDEAARFLVEHILA 190
Query: 629 NDK 631
N K
Sbjct: 191 NCK 193
>gi|196008659|ref|XP_002114195.1| hypothetical protein TRIADDRAFT_58409 [Trichoplax adhaerens]
gi|190583214|gb|EDV23285.1| hypothetical protein TRIADDRAFT_58409 [Trichoplax adhaerens]
Length = 234
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 154/210 (73%), Gaps = 1/210 (0%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+K+E L+KI+V+G GKTSII+RYVHQ+FS +Y+ATIGVDFALKV++WD ET+I+LQL
Sbjct: 25 EKKEHLFKIIVVGSKFTGKTSIIRRYVHQYFSENYKATIGVDFALKVINWDAETVIKLQL 84
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQ+ + MTRVY+K+AVGA +V+D+T TF++ KWK D+D KV LPDG+ +P V
Sbjct: 85 WDIAGQDNYEKMTRVYFKDAVGAVVVYDITDTKTFESTKKWKDDVDNKVFLPDGSTVPVV 144
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCD+ K G N+P +D+FI+++ + WFETSAK N+NID A ++LV++I E
Sbjct: 145 LLANKCDKAKIGDHNDPEYLDKFIQDNGYIKWFETSAKTNVNIDKAFRSLVEEIYEK-ST 203
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCA 662
+ +G A E V N N +E +C
Sbjct: 204 KFDGKETADPERVNLNNTNEKEGTKSSSCC 233
>gi|313228374|emb|CBY23525.1| unnamed protein product [Oikopleura dioica]
gi|313241691|emb|CBY33914.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K LVIG++G GKTS+IKRYVH F Y+ TIGVDFALKV++WD ETIIRLQLWDI
Sbjct: 3 EYLFKTLVIGDIGVGKTSLIKRYVHHVFGSTYKPTIGVDFALKVINWDSETIIRLQLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVF--DVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
AGQERFG MTRVYY++AV AFIVF D+ R TF+ V KWK DLD+KV L DG+ IPC L
Sbjct: 63 AGQERFGTMTRVYYRDAVAAFIVFVLDINRNTTFEGVRKWKDDLDSKVMLADGSKIPCFL 122
Query: 574 LANKCDQPKEG-IANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LANK D +E I A++D+F+ E F+GWF TSAK+N NID AA L++ I++N+K
Sbjct: 123 LANKIDMLEESEIDAKKAQLDDFVAEKEFAGWFPTSAKENKNIDRAASELIRTIIDNEK 181
>gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis]
gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 138/178 (77%), Gaps = 2/178 (1%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+M + +E LYK+LVIGE G GKTSII+RY +FSP+Y+ TIGVDFALK++ WD +T I
Sbjct: 8 EMGEVKEHLYKVLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFALKIIHWDEKTKIN 67
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWD+AG ERFG+MTRVYYK A+ A IVFD++R+ATFDA+LKW +D++ KV L + NPI
Sbjct: 68 LQLWDVAGHERFGHMTRVYYKYAIAAIIVFDLSRSATFDAILKWYRDVNQKVMLTNENPI 127
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P ++LANKCD E + K+D+F + + F+GWF TSAK++ NIDDA + LVQ IL
Sbjct: 128 PVIILANKCDL--EDYPVDEEKLDQFCQNNGFAGWFATSAKEDYNIDDAMRFLVQAIL 183
>gi|440803967|gb|ELR24850.1| Rab32 protein, putative [Acanthamoeba castellanii str. Neff]
Length = 216
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 146/202 (72%), Gaps = 7/202 (3%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+EFL+K+LV+G++ GKT+II+R V FS +Y+ TIGVDFALK + W T++ LQLWD
Sbjct: 14 KEFLFKVLVVGDMATGKTAIIRRCVEGAFSDNYKTTIGVDFALKTIKWGSNTLVYLQLWD 73
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQER+GN+TRVYYKEAV AF+VFD+TR ++F++V +WK D+D KV LP+G+P+P +LL
Sbjct: 74 IAGQERYGNLTRVYYKEAVAAFVVFDLTRNSSFESVKRWKDDIDNKVRLPNGDPLPVILL 133
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD K + N +D++ KE+ F WF TSAK+N NID++ +V +++ D+ A
Sbjct: 134 ANKCDMVKTAL--NEEVMDQYCKENGFISWFATSAKENTNIDESVACIVNHVIKKDEQGA 191
Query: 635 NGDSHATSEAVFSLNRNSQETK 656
GD+ A F+LN T+
Sbjct: 192 KGDAEA-----FALNEAGPSTR 208
>gi|390340858|ref|XP_003725325.1| PREDICTED: ras-related protein Rab-32-like [Strongylocentrotus
purpuratus]
Length = 190
Score = 229 bits (585), Expect = 3e-57, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 133/179 (74%), Gaps = 24/179 (13%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KRE LYK+LVIG+LG GKTS+IKRYVHQFFS HYRAT+G
Sbjct: 6 EKREHLYKVLVIGDLGVGKTSVIKRYVHQFFSQHYRATLG-------------------- 45
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
GQERFGNMTRVYYKEAVGAFIVFDVTR +TF+AV KWK DLD+KV LP+G IP V
Sbjct: 46 ----GQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVAKWKHDLDSKVQLPNGTAIPAV 101
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
LLANKCDQ KEG+ NN +++DE+ K+ F WFETSAKDNINID+AA+ LV IL NDK
Sbjct: 102 LLANKCDQTKEGLVNNSSQMDEYCKDKGFINWFETSAKDNINIDEAARFLVTSILANDK 160
>gi|444706397|gb|ELW47739.1| Ras-related protein Rab-7L1 [Tupaia chinensis]
Length = 204
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 146/213 (68%), Gaps = 17/213 (7%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR--- 178
Query: 635 NGDSHATSEAVFSL----NRNSQETKNGRNCAC 663
E V SL N + +TK+ N AC
Sbjct: 179 --------EDVLSLSTQGNYINLQTKSSSNWAC 203
>gi|291402521|ref|XP_002717602.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 1
[Oryctolagus cuniculus]
Length = 204
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 135/180 (75%), Gaps = 2/180 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N K +A
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSKEEA 181
>gi|326434156|gb|EGD79726.1| rab GTPase [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 224 bits (570), Expect = 2e-55, Method: Composition-based stats.
Identities = 116/187 (62%), Positives = 136/187 (72%), Gaps = 3/187 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D RE LYK+LV+G+ G GKTS+IKRYVH S Y+ATIGVDFALKVL + T +RLQL
Sbjct: 5 DMRELLYKVLVVGDSGVGKTSLIKRYVHGVASDKYKATIGVDFALKVLQVNENTTVRLQL 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQERFG+MTRVYYKEAVGAF+VFDVTR TF AV WK+D+DAKV LPDG+ IP V
Sbjct: 65 WDIAGQERFGSMTRVYYKEAVGAFVVFDVTRLDTFKAVKTWKEDIDAKVFLPDGSKIPVV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN--D 630
L+ANKCD EG ++ E+ F WFETSAK N NI++A LVQ ILE D
Sbjct: 125 LMANKCDLAVEGFRTQ-EEMQEYCANMGFVSWFETSAKLNKNIEEAVNCLVQNILEKEPD 183
Query: 631 KVQANGD 637
++GD
Sbjct: 184 SPHSDGD 190
>gi|403294870|ref|XP_003938385.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 203
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMSVLIEKMMRNSR 178
>gi|335295264|ref|XP_003357447.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa]
gi|335295266|ref|XP_003357448.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa]
gi|335295268|ref|XP_003357449.1| PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa]
Length = 203
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGGPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N K
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSK 178
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF KWKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 10 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF KWKQDLD+K+TLP+G P+PC+LL
Sbjct: 70 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 130 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 184
>gi|55731507|emb|CAH92465.1| hypothetical protein [Pongo abelii]
Length = 203
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD + N +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAV--NRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|395838749|ref|XP_003792270.1| PREDICTED: ras-related protein Rab-7L1 [Otolemur garnettii]
Length = 204
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YYK+A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYKDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNTR 178
>gi|4506375|ref|NP_003920.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|197101399|ref|NP_001126387.1| ras-related protein Rab-7L1 [Pongo abelii]
gi|208609962|ref|NP_001129134.1| ras-related protein Rab-7L1 isoform 1 [Homo sapiens]
gi|114572136|ref|XP_001162514.1| PREDICTED: uncharacterized protein LOC469654 isoform 4 [Pan
troglodytes]
gi|332248154|ref|XP_003273227.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Nomascus
leucogenys]
gi|332248156|ref|XP_003273228.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Nomascus
leucogenys]
gi|332811507|ref|XP_001162387.2| PREDICTED: uncharacterized protein LOC469654 isoform 1 [Pan
troglodytes]
gi|397504834|ref|XP_003822985.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|397504836|ref|XP_003822986.1| PREDICTED: ras-related protein Rab-7L1 [Pan paniscus]
gi|13633364|sp|O14966.1|RAB7L_HUMAN RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|75054849|sp|Q5R7A4.1|RAB7L_PONAB RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|2388544|dbj|BAA22160.1| small GTP-binding protein [Homo sapiens]
gi|12803517|gb|AAH02585.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|49456973|emb|CAG46807.1| RAB7L1 [Homo sapiens]
gi|54695950|gb|AAV38347.1| RAB7, member RAS oncogene family-like 1 [Homo sapiens]
gi|55731284|emb|CAH92356.1| hypothetical protein [Pongo abelii]
gi|61357258|gb|AAX41360.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
gi|119611986|gb|EAW91580.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|119611987|gb|EAW91581.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Homo
sapiens]
gi|123982028|gb|ABM82843.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|124000657|gb|ABM87837.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|157928318|gb|ABW03455.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|261859934|dbj|BAI46489.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|410211350|gb|JAA02894.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211352|gb|JAA02895.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211354|gb|JAA02896.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211356|gb|JAA02897.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211358|gb|JAA02898.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211360|gb|JAA02899.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410211362|gb|JAA02900.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256832|gb|JAA16383.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256834|gb|JAA16384.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256836|gb|JAA16385.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410256838|gb|JAA16386.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287094|gb|JAA22147.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287096|gb|JAA22148.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287098|gb|JAA22149.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287100|gb|JAA22150.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410287102|gb|JAA22151.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329207|gb|JAA33550.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329209|gb|JAA33551.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
gi|410329211|gb|JAA33552.1| RAB7, member RAS oncogene family-like 1 [Pan troglodytes]
Length = 203
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|60834171|gb|AAX37082.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|189066586|dbj|BAG35836.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSRHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|296230574|ref|XP_002760764.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Callithrix
jacchus]
Length = 203
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMSVLIEKMMRNSR 178
>gi|449687786|ref|XP_004211547.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-32A-like
[Hydra magnipapillata]
Length = 322
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 122/157 (77%), Gaps = 1/157 (0%)
Query: 487 YRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAAT 546
++ IGVDFALKVL+WD T+IRLQLWDI+G+ERFG M RVYYKEAVG I+FDVT+ T
Sbjct: 88 FKLKIGVDFALKVLNWDETTLIRLQLWDISGEERFGKMNRVYYKEAVGCMIIFDVTQPET 147
Query: 547 FDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFE 606
F+ V WKQDLD+KV LP+G P+PCVLLANKCD PK G NN + +D++ E F WFE
Sbjct: 148 FENVWNWKQDLDSKVQLPNGQPVPCVLLANKCDLPKVGTVNNKSYMDKYCVEKGFHSWFE 207
Query: 607 TSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSE 643
TSAK+NIN+D+ AK+LV+KILENDK N SH +E
Sbjct: 208 TSAKENINVDNVAKSLVEKILENDK-SNNIYSHEDTE 243
>gi|351710940|gb|EHB13859.1| Ras-related protein Rab-7L1 [Heterocephalus glaber]
Length = 204
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFAGWTETSVKENKNINEAMRVLVEKMMSN 176
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|432116090|gb|ELK37217.1| Ras-related protein Rab-7L1 [Myotis davidii]
Length = 203
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N N+++A + LV+K++ N K
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNVNEAMRVLVEKMMSNSK 178
>gi|344277036|ref|XP_003410311.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Loxodonta
africana]
Length = 204
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMNNSR 178
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius furo]
Length = 202
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|324518284|gb|ADY47060.1| Ras-related protein Rab-32 [Ascaris suum]
Length = 231
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 134/180 (74%), Gaps = 7/180 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K++ L+KIL+IG++G GK+SI++RYVH F+ +Y+AT+GVDFA+KVL WD +T++RLQ+W
Sbjct: 17 KKQLLFKILIIGDVGTGKSSIVRRYVHNLFNQYYKATVGVDFAMKVLVWDVDTLLRLQIW 76
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DI+GQ+RFGNMTRVYYK+A GA IVFD TR AT+D L+WK DLD KV L +G P+P VL
Sbjct: 77 DISGQDRFGNMTRVYYKDAHGALIVFDATRQATYDGALRWKADLDNKVCLANGKPVPAVL 136
Query: 574 LANKCDQPKEGIANNPAK--IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
+ANKCD I N + + E+ K+ +F G F SAKDN I++ + L + I+ +K
Sbjct: 137 IANKCD-----IENKVTEDLLAEYCKKESFIGAFRASAKDNFGIEEGFRFLAEHIVATEK 191
>gi|348578125|ref|XP_003474834.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Cavia
porcellus]
Length = 204
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKV+ W ++RLQLWD
Sbjct: 4 HDHLFKVLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVGVDFALKVIQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMSNSR 178
>gi|301786128|ref|XP_002928478.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Ailuropoda
melanoleuca]
gi|281339455|gb|EFB15039.1| hypothetical protein PANDA_018438 [Ailuropoda melanoleuca]
Length = 203
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNAMTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFIGWTETSVKENKNINEAMRVLIEKMMNNSR 178
>gi|386781459|ref|NP_001247882.1| ras-related protein Rab-7L1 [Macaca mulatta]
gi|402857442|ref|XP_003893264.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|402857444|ref|XP_003893265.1| PREDICTED: ras-related protein Rab-7L1 [Papio anubis]
gi|355558842|gb|EHH15622.1| hypothetical protein EGK_01737 [Macaca mulatta]
gi|355745985|gb|EHH50610.1| hypothetical protein EGM_01467 [Macaca fascicularis]
gi|380786041|gb|AFE64896.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
gi|383411345|gb|AFH28886.1| ras-related protein Rab-7L1 isoform 1 [Macaca mulatta]
Length = 203
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G +PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGELVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSR 178
>gi|410986335|ref|XP_003999466.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Felis catus]
Length = 203
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY F+ HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVGVDFALKVLQWSDSEVVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFTNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|74005894|ref|XP_536104.2| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Canis lupus
familiaris]
Length = 203
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY F HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 178
>gi|62898760|dbj|BAD97234.1| RAB7, member RAS oncogene family-like 1 variant [Homo sapiens]
Length = 203
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS ++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSPVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|417397029|gb|JAA45548.1| Putative gtp-binding protein-like ras superfamily [Desmodus
rotundus]
Length = 203
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF KWKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGKPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + ++D F KE+ F GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QVDRFSKENGFIGWTETSVKENKNINEAMRVLIEKMMSN 176
>gi|148237858|ref|NP_001091380.1| uncharacterized protein LOC100037231 [Xenopus laevis]
gi|125858912|gb|AAI29780.1| LOC100037231 protein [Xenopus laevis]
Length = 209
Score = 219 bits (557), Expect = 5e-54, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 145/190 (76%), Gaps = 7/190 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE L K+LV+G+LG GKTSII+RYVH FS YRATIGVDFALK+++WD +T++RLQLW
Sbjct: 5 QREILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLDTVVRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFG+MTR+YY+EAVGA +V D+ R AT ++V +WK+DLD+KV L +GNPIP +L
Sbjct: 65 DIAGQERFGHMTRLYYREAVGAVVVCDLGRVATVESVSRWKEDLDSKVCLQNGNPIPVIL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
L NKCDQ G + + +++ +E FS TSAK+N+NID A +L+++I+ ND+
Sbjct: 125 LGNKCDQVPLG--TSVSNLEQLGQELGFSYSHVTSAKENVNIDMAISSLIKEIIANDE-- 180
Query: 634 ANGDSHATSE 643
DS T++
Sbjct: 181 ---DSEPTND 187
>gi|54696028|gb|AAV38386.1| RAB7, member RAS oncogene family-like 1 [synthetic construct]
gi|61367282|gb|AAX42976.1| RAB7 member RAS oncogene family-like 1 [synthetic construct]
Length = 204
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G DFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGGDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 183
Score = 218 bits (554), Expect = 1e-53, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 132/175 (75%), Gaps = 4/175 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYVH FS Y+ATIGVDFA K++ + ++RLQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
NKCD + GI NP +D++ +++ F W ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGFVKWHETSAKDGVNVDDGINFLVKCILETE 173
>gi|229608951|ref|NP_659124.2| ras-related protein Rab-7L1 [Mus musculus]
Length = 204
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID+F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDQFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>gi|348511017|ref|XP_003443041.1| PREDICTED: ras-related protein Rab-32-like [Oreochromis niloticus]
Length = 224
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 134/182 (73%), Gaps = 1/182 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+K+LVIG+LG GK+S++ RYV++ F Y+A+IGVDFALK + WD +T++RLQLWDI G
Sbjct: 13 LFKVLVIGDLGVGKSSVVMRYVNKRFDETYKASIGVDFALKTIEWDPKTVVRLQLWDIGG 72
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QER NM+RVYYKEA+GA +VFD+T + T +A +WKQDLD KV L G PIP VLLANK
Sbjct: 73 QERVKNMSRVYYKEAMGAVVVFDITNSCTLEAASEWKQDLDTKVRLDSGQPIPAVLLANK 132
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGD 637
CD A + +D F K+++F GWFETSAK++INI++A LV++I+ D + +
Sbjct: 133 CDLTGRDEA-LVSSLDSFCKDNSFLGWFETSAKEDINIEEAGAFLVKQIMLCDTSLSTEE 191
Query: 638 SH 639
H
Sbjct: 192 HH 193
>gi|19424290|ref|NP_598274.1| ras-related protein Rab-7L1 [Rattus norvegicus]
gi|81910561|sp|Q63481.1|RAB7L_RAT RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1; AltName: Full=Ras-related protein Rab-29
gi|1235593|emb|CAA65444.1| GTPase [Rattus norvegicus]
gi|149058655|gb|EDM09812.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
gi|149058656|gb|EDM09813.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 204
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>gi|51316505|sp|Q91YQ1.1|RAB7L_MOUSE RecName: Full=Ras-related protein Rab-7L1; AltName: Full=Rab-7-like
protein 1
gi|16359355|gb|AAH16133.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|20809768|gb|AAH29056.1| RAB7, member RAS oncogene family-like 1 [Mus musculus]
gi|112293019|dbj|BAF02887.1| Rab29 [Mus musculus]
gi|148707749|gb|EDL39696.1| RAB7, member RAS oncogene family-like 1, isoform CRA_a [Mus
musculus]
Length = 204
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>gi|348675957|gb|EGZ15775.1| hypothetical protein PHYSODRAFT_561505 [Phytophthora sojae]
Length = 218
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 4/175 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+G+ GKTSIIKRYVH FS H+R TIGVDFALK ++ + T +RLQLWDIAG
Sbjct: 13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVT-VNGTTVRLQLWDIAG 71
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QE F + RVYYK+A+GA +V+D++R TFD++LKWK+++D+KV LP+G P+P +L NK
Sbjct: 72 QEHFRALNRVYYKDALGALLVYDMSRPETFDSILKWKKEIDSKVELPNGKPLPVILCGNK 131
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
CD +E + +DEF K +NF+GWF+TSAK+NI+IDDAAK LV ILE+ +
Sbjct: 132 CDLKEE---VDRGFLDEFCKTNNFTGWFDTSAKENIHIDDAAKALVTGILEHQDI 183
>gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis]
gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis]
gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 216 bits (549), Expect = 4e-53, Method: Composition-based stats.
Identities = 103/189 (54%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYVH FS Y+ATIGVDFA K++ + ++RLQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + GI NP +D++ +++ F W ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGFVKWHETSAKDGVNVDDGINFLVKCILETESHSGP 178
Query: 636 GDSHATSEA 644
D + E
Sbjct: 179 EDGTSKPEG 187
>gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis]
Length = 186
Score = 215 bits (548), Expect = 5e-53, Method: Composition-based stats.
Identities = 103/188 (54%), Positives = 135/188 (71%), Gaps = 4/188 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYVH FS Y+ATIGVDFA K++ + ++RLQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + GI NP +D++ +++ F W ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGFVKWHETSAKDGVNVDDGINFLVKCILETESHSGP 178
Query: 636 GDSHATSE 643
D + E
Sbjct: 179 EDGTSKPE 186
>gi|354478103|ref|XP_003501255.1| PREDICTED: ras-related protein Rab-7L1-like [Cricetulus griseus]
Length = 204
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G+P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGDPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFIGWTETSVKENRNINEAMRVLVEKMMNNSR 178
>gi|118102410|ref|XP_417967.2| PREDICTED: ras-related protein Rab-7L1 [Gallus gallus]
Length = 205
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 137/189 (72%), Gaps = 6/189 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+R+ ++K+LV+G+ GKTS+++RY + F+ HY++T+GVDFALKV+ W +RLQLW
Sbjct: 3 QRDRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLW 62
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERF +MTR+YY+EA I+FDVT +TF KWKQDLD+K+TLPDG+P+PC+L
Sbjct: 63 DIAGQERFTSMTRLYYREASACVIMFDVTNVSTFSNSQKWKQDLDSKLTLPDGSPVPCLL 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
LANKCD + ++D F KE+ FSGW ETS K+N NI+++ + L++K++ +
Sbjct: 123 LANKCDLSPWAVTRE--EVDRFSKENGFSGWVETSVKENKNINESMRVLIEKMMSS---- 176
Query: 634 ANGDSHATS 642
+ GD A +
Sbjct: 177 STGDGSAAA 185
>gi|395531196|ref|XP_003767668.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Sarcophilus
harrisii]
Length = 204
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R++L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKV+ W ++RLQLWD
Sbjct: 4 RDYLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVVQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDAAACVIMFDVTNATTFSNSQRWKQDLDCKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D + + +ID F KE+ F+GW ETS K+N NI++A + L+++++ N +
Sbjct: 124 ANKSDLSPWAVTRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEQMMANTR 178
>gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 184
Score = 214 bits (546), Expect = 8e-53, Method: Composition-based stats.
Identities = 100/175 (57%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYVH FS Y+ TIGVDFA K++ + ++RLQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKTTIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
NKCD + GI NP +D++ +++ F W ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGFVKWHETSAKDGVNVDDGINFLVKCILETE 173
>gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 214 bits (544), Expect = 2e-52, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 135/189 (71%), Gaps = 4/189 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYV+ FS Y+ATIGVDFA K++ + ++RLQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVYNIFSREYKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + GI NP +D++ +++ F W ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGFVKWHETSAKDGVNVDDGINFLVKCILETESHSGP 178
Query: 636 GDSHATSEA 644
D + E
Sbjct: 179 EDGTSKPEG 187
>gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis]
Length = 187
Score = 213 bits (541), Expect = 3e-52, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 134/189 (70%), Gaps = 4/189 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+LV+G+LG GKTS+I+RYVH FS Y+ATIGVDFA K++ + ++ LQLWDIAG
Sbjct: 1 LLKVLVVGDLGVGKTSLIQRYVHNIFSREYKATIGVDFAYKLIPIAEDKVVGLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLA 575
QER+GNMTRVYY+EA GA IVFD++R T D+V KWK D+D+KV LPD + PIP VL+A
Sbjct: 61 QERYGNMTRVYYREAFGAIIVFDLSRPGTLDSVRKWKADIDSKVRLPDPDESPIPVVLMA 120
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + GI NP +D++ +++ W+ETSAKD +N+DD LV+ ILE +
Sbjct: 121 NKCDLIRNGI--NPVHLDQYCRDNGLVKWYETSAKDGVNVDDGINFLVKCILETESHSGP 178
Query: 636 GDSHATSEA 644
D + E
Sbjct: 179 EDGTSKPEG 187
>gi|327278637|ref|XP_003224067.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Anolis
carolinensis]
Length = 202
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 128/170 (75%), Gaps = 2/170 (1%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
++K+L+IG+ GKTS+++RY + F+ HY++T+GVDFALKV+ W +RLQLWDIAG
Sbjct: 1 MFKVLIIGDATVGKTSLVQRYANDSFNKHYKSTVGVDFALKVVQWSDSETVRLQLWDIAG 60
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF +MTR+YYKEA I+FDVT +TF + KWKQDLD+K+ LPDGNP+PC+LLANK
Sbjct: 61 QERFTSMTRLYYKEASACVIMFDVTSVSTFTSCQKWKQDLDSKLRLPDGNPVPCLLLANK 120
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
CD + +ID F KE+ F+GW ETS K+N NI+++ + L++K++
Sbjct: 121 CDLYPWSVTRE--EIDRFSKENGFTGWTETSVKENKNINESMRVLIEKMM 168
>gi|281208325|gb|EFA82501.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 218
Score = 213 bits (541), Expect = 4e-52, Method: Composition-based stats.
Identities = 103/174 (59%), Positives = 126/174 (72%), Gaps = 2/174 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
++ LYKILVIG+ GKTSIIKRY FSP+Y+ TIGVDFA+K + WD T + LQLWD
Sbjct: 10 QQHLYKILVIGDYAVGKTSIIKRYCTGMFSPNYKLTIGVDFAVKEVQWDKNTTVSLQLWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG MTRVYYK A+ A IVFD+ R TF+AV KW+ D+++KV L + PIP +LL
Sbjct: 70 IAGHERFGTMTRVYYKYAIAAIIVFDLGRPTTFEAVTKWRDDINSKVVLGNQQPIPVLLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
ANKCD I + A +D F+KEHNF GWF TSA+ NINID+A L K+LE
Sbjct: 130 ANKCDMKDSSI--DKAMLDNFVKEHNFIGWFPTSAQSNINIDEAMMFLTGKVLE 181
>gi|301122745|ref|XP_002909099.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099861|gb|EEY57913.1| Rab32 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 132/172 (76%), Gaps = 4/172 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+G+ GKTSIIKRYVH FS H+R TIGVDFALK ++ T +RLQLWDIAG
Sbjct: 13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVT-VSGTTVRLQLWDIAG 71
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QE F + RVYYK+A+GA +V+D++R TFD+++KWK+++D+KV LP+G P+P +L NK
Sbjct: 72 QEHFRALNRVYYKDALGALLVYDMSRPETFDSIMKWKKEIDSKVELPNGKPLPVILCGNK 131
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
CD KE + + +DEF +NF+GWF+TSAK+NI+IDDAAK LV ILE+
Sbjct: 132 CD-LKEDVDRDF--LDEFCNTNNFTGWFDTSAKENIHIDDAAKALVTGILEH 180
>gi|339247021|ref|XP_003375144.1| Ras-related protein Rab-32 [Trichinella spiralis]
gi|316971523|gb|EFV55281.1| Ras-related protein Rab-32 [Trichinella spiralis]
Length = 247
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 123/182 (67%), Gaps = 1/182 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+ +KILVIG++ GKTSII+RYVH FS Y+ATIGVDFA+K+ + + RLQ WDI
Sbjct: 33 EYTFKILVIGDICTGKTSIIRRYVHNLFSSQYQATIGVDFAMKIFHCSNSSTARLQFWDI 92
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTRVYY+ A GA IVFDV+RA+T D V +WK+DLD+K L +G PIP VLLA
Sbjct: 93 AGQERFSSMTRVYYRGAAGAIIVFDVSRASTLDGVTRWKKDLDSKCRLSNGMPIPAVLLA 152
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D K +K+D F +H F GWF TSAK + I +A L + V+ N
Sbjct: 153 NKSDLLKHYATEQLSKLDSFCAKHGFVGWFATSAKLSTGIAEAVSNLCEH-ASMIMVEMN 211
Query: 636 GD 637
G+
Sbjct: 212 GN 213
>gi|440804650|gb|ELR25527.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii str.
Neff]
Length = 238
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 154/232 (66%), Gaps = 14/232 (6%)
Query: 438 TNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFAL 497
TNG + + P ++ K+EFLYKILV+G +G GKTSIIKRY FS +Y++TIGVDFAL
Sbjct: 15 TNGGAPKELPAAQ---KKEFLYKILVVGNMGTGKTSIIKRYCDNEFSDNYKSTIGVDFAL 71
Query: 498 KVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTR--AATFDAVLKWKQ 555
K L W H +++ LQLWDIAGQER+GN+TRVYY++AVG F+V D+ R + D V KWK
Sbjct: 72 KSLEWGHNSMVHLQLWDIAGQERYGNLTRVYYRDAVGGFVVLDLGRPLQESLDIVKKWKG 131
Query: 556 DLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINI 615
D+D+K+ L +G+ +P VLLANK D + A+ ++EF KE+ F GWF TSAK+N+++
Sbjct: 132 DIDSKIRLWNGDALPVVLLANKVDLLGDKKADERT-LEEFAKENGFIGWFATSAKENLHV 190
Query: 616 DDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETK----NGRNCAC 663
+ A L+ I+ N NG ++++ L + +E + +G C+C
Sbjct: 191 EKAMTFLINHIIHN---YQNGPQPENTDSM-HLTLDEKEIRKYEDDGGGCSC 238
>gi|427783513|gb|JAA57208.1| Putative rab gtpase [Rhipicephalus pulchellus]
Length = 225
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 139/215 (64%), Gaps = 14/215 (6%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + L+K+LVIG+ G GKTS+I+RY F+P Y+ TIGVDF+LK L ++ I LQL
Sbjct: 20 DIEDLLFKVLVIGDFGVGKTSLIRRYTEGVFNPAYKITIGVDFSLKHLVYNGNKHITLQL 79
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAG ERFG MTRVYYK A A IV+D++R AT +VLKWK DL AKV LP+G P+P +
Sbjct: 80 WDIAGHERFGYMTRVYYKYATAAVIVYDLSRPATLHSVLKWKADLTAKVELPNGRPLPVL 139
Query: 573 LLANKCD---QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
L+ANKCD QP N + F +EH F+GWF TSAK++INI++A + LV+++L
Sbjct: 140 LVANKCDLGSQPP-----NARFLSNFCQEHGFTGWFPTSAKEDININEAMRCLVEEVLAQ 194
Query: 630 DKVQANGDSHATSEAVFSLNR-NSQETKNGRNCAC 663
+ D H SL R + T +GR C
Sbjct: 195 RE-----DCHLVGHQDQSLKRLGPRTTPSGRKSCC 224
>gi|156537368|ref|XP_001606642.1| PREDICTED: ras-related protein Rab-32-like [Nasonia vitripennis]
Length = 222
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+KILVIG+ G GKT+I++RY FS +Y+ TIG DFA+K L WD +T I+LQLW
Sbjct: 20 QKELLFKILVIGDYGVGKTAIVRRYTEGKFSSNYKITIGADFAIKNLDWDSQTKIKLQLW 79
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAG ERFG MTRVYYK AV A +VFD++R ATF +V KW DL KVTLPDG+ IP VL
Sbjct: 80 DIAGHERFGYMTRVYYKYAVAAALVFDISRVATFQSVKKWLGDLREKVTLPDGSKIPIVL 139
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
LANKCD + + N +I +F KE++ WF TSAK+N+NID+A LV +L+
Sbjct: 140 LANKCDINQAAVPNE--QIIKFCKENDIGSWFVTSAKENLNIDEAMHYLVGNVLK 192
>gi|26347571|dbj|BAC37434.1| unnamed protein product [Mus musculus]
Length = 160
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 115/130 (88%), Gaps = 1/130 (0%)
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD T++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 2 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 61
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H F+GWFETSAKDNINID+A
Sbjct: 62 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFTGWFETSAKDNINIDEAT 120
Query: 620 KTLVQKILEN 629
+ LV+ +L N
Sbjct: 121 RFLVENMLAN 130
>gi|330792796|ref|XP_003284473.1| Rab GTPase [Dictyostelium purpureum]
gi|325085616|gb|EGC39020.1| Rab GTPase [Dictyostelium purpureum]
Length = 252
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+L+IG+ GKTS+IKRY FSP+Y+ TIGVDF++K + W+ ++ LQLWDIAG
Sbjct: 51 LYKVLLIGDYAVGKTSLIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKVVSLQLWDIAG 110
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
ERFG MTRVYY+ A+ A IVFD++R +TFDAV KW++D+++KV L + PIP +LLANK
Sbjct: 111 HERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVLLLANK 170
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGD 637
D P + + +D F KE+NF GW+ TSA +N NID+A + L +KILE A +
Sbjct: 171 SDLPTSYV--DSEMLDNFCKENNFIGWYATSALNNANIDEAMRFLTKKILE----VAKTN 224
Query: 638 SHATSEAVFSLNR---NSQETKNGRNCA 662
E SLN+ N Q+T N ++C
Sbjct: 225 HPVKEEDGLSLNKPITNDQDT-NKKSCC 251
>gi|410930402|ref|XP_003978587.1| PREDICTED: ras-related protein Rab-32-like [Takifugu rubripes]
Length = 213
Score = 209 bits (531), Expect = 5e-51, Method: Composition-based stats.
Identities = 97/173 (56%), Positives = 133/173 (76%), Gaps = 1/173 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K+LVIG+LG GK+S+I +YV + F Y+A+IGVDFALK + WD +T++RLQ WD
Sbjct: 10 KEKLFKVLVIGDLGVGKSSVILQYVKKCFMEKYKASIGVDFALKTIEWDPQTLVRLQFWD 69
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF M+RVYYK A+GA +VFD+T ++T +A +WK+DLD+KV L G+ +P VLL
Sbjct: 70 IAGQERFRKMSRVYYKGAMGALVVFDITNSSTLEAASEWKEDLDSKVCLHSGHLLPAVLL 129
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
ANKCD +P+ +D F +++ FSGWFETSAKDNINID+A LVQ+++
Sbjct: 130 ANKCDGEGRD-RGDPSWLDGFCEKNGFSGWFETSAKDNINIDEAVHFLVQQMM 181
>gi|47221259|emb|CAG13195.1| unnamed protein product [Tetraodon nigroviridis]
Length = 288
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 130/176 (73%), Gaps = 1/176 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIG+LG GK+S+I RYV++ F Y+A+IGVDFALK + WD +T++RLQ WD
Sbjct: 1 REKLFKVLVIGDLGVGKSSVILRYVNKRFVEKYKASIGVDFALKTIEWDPQTVVRLQFWD 60
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF M+RVYYK A+G +VFD T+ +T +A +WK+DLD KV L G P+P VLL
Sbjct: 61 IAGQERFRKMSRVYYKGAMGVLVVFDGTKRSTLEAASEWKRDLDGKVRLDGGRPLPSVLL 120
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCD + + ++ F +E++FSG FETSAKDNINID+A LV +++ D
Sbjct: 121 ANKCDLKGRD-RGDASWLNTFCEENSFSGCFETSAKDNINIDEAVDFLVTQMMLRD 175
>gi|440803944|gb|ELR24827.1| Rasrelated protein Rab-32, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 206 bits (525), Expect = 2e-50, Method: Composition-based stats.
Identities = 103/184 (55%), Positives = 138/184 (75%), Gaps = 7/184 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKT+II+R V FS Y+ TIGVDFALK + + TI LQLWDI
Sbjct: 16 EYLYKILVVGDIGTGKTAIIRRCVENQFSESYKTTIGVDFALKTIQRSNATI-HLQLWDI 74
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+GN+TRVYYKEAVGAF+VFD+TR ++F+AV +WK+D+D V LP+G+P+P VLLA
Sbjct: 75 AGQERYGNLTRVYYKEAVGAFVVFDLTRNSSFEAVKRWKEDID-NVRLPNGDPLPVVLLA 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL---ENDKV 632
NKCD K ++ ++++ KE+ F WF TSAK+NINID+A LV+ I+ ND +
Sbjct: 134 NKCDLVKTPLSEE--VMNDYCKENGFLAWFATSAKENINIDEAVNFLVENIIVHGSNDAI 191
Query: 633 QANG 636
+ G
Sbjct: 192 KGPG 195
>gi|170590099|ref|XP_001899810.1| Ras family protein [Brugia malayi]
gi|158592729|gb|EDP31326.1| Ras family protein [Brugia malayi]
Length = 230
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K +FL+KIL+IG++G GK+SI++RY H F+ HY+AT+GVDFA + L W E +RLQLW
Sbjct: 18 KDQFLFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLIWSDEATLRLQLW 77
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DI+GQ+RF NMTRVYYK+A GA +VFD TR T+D L+WK DLD+K+TL G P+PC+L
Sbjct: 78 DISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKSDLDSKITLATGKPLPCIL 137
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+ANK D + K++E+ ++ F +TSAK N I+DA L ++ILE
Sbjct: 138 VANKADLDNK---ITSGKLEEYREKGGFLNALKTSAKSNYGIEDAFGLLTEQILE 189
>gi|154414735|ref|XP_001580394.1| Ras family protein [Trichomonas vaginalis G3]
gi|121914611|gb|EAY19408.1| Ras family protein [Trichomonas vaginalis G3]
Length = 215
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 129/173 (74%), Gaps = 1/173 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+GE+G GKTS+I++YV FFS Y+ TIGVDFA K + WD + I LQLWDIAG
Sbjct: 14 ILKVLVVGEMGTGKTSLIRQYVQGFFSEFYKTTIGVDFATKEIEWDEKITISLQLWDIAG 73
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QER+GNMTRVYY+EAV A++VFDVTR + + V +WK+D+++KV PIPC+LL NK
Sbjct: 74 QERYGNMTRVYYQEAVAAWVVFDVTRLQSLEMVKEWKKDIESKVFTSTDQPIPCLLLGNK 133
Query: 578 CDQPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
D +G N P +++EF KE++F +FETSA+ N+++AA+ LVQ +++N
Sbjct: 134 IDLVSDGKWNKTPEEMEEFCKENHFLKFFETSARSRTNVEEAARYLVQYVMDN 186
>gi|290991925|ref|XP_002678585.1| rab family small GTPase [Naegleria gruberi]
gi|284092198|gb|EFC45841.1| rab family small GTPase [Naegleria gruberi]
Length = 284
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 137/212 (64%), Gaps = 11/212 (5%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LV+G+ GKTS+I+RY F+ +YR TIGVDF LK + W+ T + LQLWDIAG
Sbjct: 60 LYKVLVVGDYAVGKTSLIRRYCTGEFTSNYRITIGVDFCLKHIDWNENTSVSLQLWDIAG 119
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG-NPIPCVLLAN 576
ERFG MTRVYYK A+ A + FD++R +T D V KW+ D+++KV LPDG PIP +LLAN
Sbjct: 120 HERFGAMTRVYYKYAIAAVVCFDISRPSTLDNVKKWRDDINSKVVLPDGVTPIPMILLAN 179
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV---QKILENDKVQ 633
KCD P+ I + K+++F KE+ F WFETSA+ N+NID A LV KI +N +Q
Sbjct: 180 KCDLPE--ITIDKTKMNKFAKENGFIAWFETSARKNVNIDTAFHFLVSHIMKITKNMTLQ 237
Query: 634 AN-----GDSHATSEAVFSLNRNSQETKNGRN 660
GD T V +NS KN ++
Sbjct: 238 TQGQNNLGDHKKTELNVVGATQNSNFDKNDKD 269
>gi|298713180|emb|CBJ26936.1| Rab32A, RAB family GTPase [Ectocarpus siliculosus]
Length = 276
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 130/177 (73%), Gaps = 6/177 (3%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+LV+G+ GKTSIIKRYVH FFS H++ T+GVDFALK L +T ++LQLWDIAGQ+
Sbjct: 81 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLV-VGDTTVKLQLWDIAGQD 139
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RFG++ R YYKEA+GA +V+D+ R+++F V +WK ++D KV LPDG +P VLLANKCD
Sbjct: 140 RFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCD 199
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANG 636
I + + F H F+GWFETSAK NINID+ ++ LV+K+LE ++ A+G
Sbjct: 200 LD---IPIDREALTWFCDRHGFAGWFETSAKQNINIDEGSRFLVEKVLE--RIPASG 251
>gi|51859426|gb|AAH81732.1| Rab7l1 protein [Rattus norvegicus]
Length = 167
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%), Gaps = 2/166 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMR 167
>gi|126306731|ref|XP_001365593.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Monodelphis
domestica]
Length = 204
Score = 204 bits (520), Expect = 9e-50, Method: Composition-based stats.
Identities = 92/177 (51%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R++L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDYLFKVLVVGDAAVGKTSLVQRYCQDSFSRHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF KWKQDLD K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNCQKWKQDLDCKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D + + +ID F KE+ F+GW ETS K+N N+++A + L+++++ N +
Sbjct: 124 ANKSDLSPWAMTRD--QIDRFSKENGFTGWTETSVKENKNVNEAMRVLIEQMMANTR 178
>gi|196008661|ref|XP_002114196.1| hypothetical protein TRIADDRAFT_58410 [Trichoplax adhaerens]
gi|190583215|gb|EDV23286.1| hypothetical protein TRIADDRAFT_58410 [Trichoplax adhaerens]
Length = 243
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 129/174 (74%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E +K +++G+ GK+SII+RYV F+ +Y+ T+GVDFALKV++WD +T I+LQLWD
Sbjct: 37 KEHSFKFIIVGKNHTGKSSIIRRYVDGLFTDYYKITMGVDFALKVINWDAKTTIKLQLWD 96
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
+ GQ+ MT VY+K+AVGAF+V+DVT TF++ WK+D+D KV LPDG IP VLL
Sbjct: 97 VQGQDFNEKMTHVYFKDAVGAFVVYDVTDVKTFESTKMWKEDIDKKVFLPDGCKIPVVLL 156
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
ANKCD+ K G N+P +D +I+++ + WFETSAK INID A ++LV+++ E
Sbjct: 157 ANKCDKAKVGNHNSPEYLDNYIQDNGYIKWFETSAKTGINIDKAFRSLVEEVYE 210
>gi|290562215|gb|ADD38504.1| Ras-related protein Rab-32 [Lepeophtheirus salmonis]
Length = 429
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/224 (45%), Positives = 137/224 (61%), Gaps = 9/224 (4%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G KE S + +K LYKIL IG AGKTSII+RYV F+P YRATIG DF KV
Sbjct: 215 GGHKE----SDISNKESKLYKILFIGSSSAGKTSIIRRYVKHTFTPSYRATIGADFLSKV 270
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
+ WD +RLQLWDIAGQ+RF ++R +YK+AVGAFIV D++R T DA + WK++LDA
Sbjct: 271 IHWDEAVTLRLQLWDIAGQDRFSLLSRSFYKDAVGAFIVCDISRPDTLDACIPWKEELDA 330
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV +G +PC LLANKCD ++ A + + + H F GW +TSAK++INI A
Sbjct: 331 KVQTSEGGKLPCFLLANKCDLVEDSTAQSKLT-SKVCQMHGFHGWMQTSAKEDINITQAI 389
Query: 620 KTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ L+++I++ D + AT + L N K C C
Sbjct: 390 EMLLRQIVKQD---IDSTPFATDQESLVLE-NEGRKKKRSGCLC 429
>gi|66825191|ref|XP_645950.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897435|sp|Q55E31.1|RB32B_DICDI RecName: Full=Ras-related protein Rab-32B
gi|60474121|gb|EAL72058.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 260
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + LYK+L+IG+ GK+SIIKRY FSP+Y+ TIGVDF++K + W+ I+ LQL
Sbjct: 54 DIEKHLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQL 113
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAG ERFG MTRVYY+ A+ A IVFD++R +TFDAV KW++D+++KV L + PIP +
Sbjct: 114 WDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVL 173
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
LLANK D + + +D F KE+NF GWF TSA ++ NI++A L ++ILE
Sbjct: 174 LLANKSDLSTSYV--DSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEILE 227
>gi|380015232|ref|XP_003691611.1| PREDICTED: LOW QUALITY PROTEIN: phosphotriesterase-related
protein-like [Apis florea]
Length = 547
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 121/173 (69%), Gaps = 2/173 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY F+ +Y+ TIG DFA+K L WD T I LQLWD
Sbjct: 349 KELLFKFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDWDPLTKINLQLWD 408
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
+AG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVTLPDG+ IP VLL
Sbjct: 409 VAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTLPDGSNIPVVLL 468
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
ANKCD P + +I F KE+N W+ TSAK+N N+D A + LV+ +L
Sbjct: 469 ANKCDIPCPVVPTE--QIARFCKENNIGAWYVTSAKENTNVDVAMRYLVENVL 519
>gi|402585290|gb|EJW79230.1| Ras family protein, partial [Wuchereria bancrofti]
Length = 225
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 129/183 (70%), Gaps = 6/183 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K +FL+KIL+IG++G GK+SI++RY H F+ HY+AT+GVDFA + L W +RLQLW
Sbjct: 13 KDQFLFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLLWSDGATLRLQLW 72
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DI+GQ+RF NMTRVYYK+A GA +VFD TR T+D L+WK DLD+K+TL G P+PC+L
Sbjct: 73 DISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKSDLDSKITLATGKPLPCIL 132
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
+ANK D + I N K++E ++ F +TSAK N I+DA L ++ILE ++
Sbjct: 133 VANKADLDNK-ITN--GKLEECREKGGFLNALKTSAKANYGIEDAFGLLAEQILE---IK 186
Query: 634 ANG 636
NG
Sbjct: 187 KNG 189
>gi|320167999|gb|EFW44898.1| hypothetical protein CAOG_02904 [Capsaspora owczarzaki ATCC 30864]
Length = 225
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 121/174 (69%), Gaps = 5/174 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+KI+VIG+ TS+I+RY FF+P+Y+ TIG DFA KVL W+ I LQLWDIAG
Sbjct: 12 LFKIIVIGDYA---TSLIRRYSEGFFTPNYKLTIGADFATKVLEWESGAKITLQLWDIAG 68
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
ERFG+MT VYYK A+ A IVFD+TR ATFD+V+KW D++ KV LPDG P+P +LLANK
Sbjct: 69 HERFGHMTHVYYKYAIAAVIVFDMTRPATFDSVIKWLNDVNNKVMLPDGKPVPVMLLANK 128
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
D + + K+D+F KEH GWF TSAK+N NID A LV +++ K
Sbjct: 129 ADMSDKSVYKQ--KLDDFCKEHGLIGWFATSAKNNANIDQAMNFLVGSVIQISK 180
>gi|301610828|ref|XP_002934952.1| PREDICTED: ras-related protein Rab-32-like [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 201 bits (511), Expect = 9e-49, Method: Composition-based stats.
Identities = 94/157 (59%), Positives = 122/157 (77%), Gaps = 2/157 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+RE L K+LV+G+LG GKTSII+RYVH FS YRATIGVDFALK+++WD T++RLQLW
Sbjct: 5 QREILCKVLVVGDLGVGKTSIIQRYVHNVFSQCYRATIGVDFALKIVNWDLNTMVRLQLW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERFG+MTR+YY+EAVGA +V D+ R AT ++V +WK+DLD+KV L +GNPIP +L
Sbjct: 65 DIAGQERFGHMTRLYYREAVGALVVCDLGRVATVESVSRWKEDLDSKVCLQNGNPIPVIL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAK 610
L NKCDQ G + + +++ +E FS TSAK
Sbjct: 125 LGNKCDQVPLG--TSASNLEQLGEELGFSHSHMTSAK 159
>gi|154422404|ref|XP_001584214.1| Ras family protein [Trichomonas vaginalis G3]
gi|121918460|gb|EAY23228.1| Ras family protein [Trichomonas vaginalis G3]
Length = 214
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 140/212 (66%), Gaps = 8/212 (3%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ ++KILV+GE+G GKTS++++YV FS +Y+ TIGVDFA K + WD +T + LQ
Sbjct: 10 PESMRKIFKILVVGEMGTGKTSLLRKYVDGVFSEYYKTTIGVDFASKDIKWDDKTNVSLQ 69
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFG+MT VYY+EAVGA +VFDV R T + ++WK+D+D+KV PIPC
Sbjct: 70 LWDIAGQERFGSMTHVYYQEAVGALLVFDVMRHQTLELAIQWKKDIDSKVFTSQDKPIPC 129
Query: 572 VLLANKCDQPKEG-IANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+LL NK D ++G ++ F EH F G+FETSA+ N+++A + LV+ I+EN+
Sbjct: 130 LLLGNKIDLAEDGKWGKTEEEMKAFCDEHGFIGFFETSARTGHNLEEAPRALVKYIIENN 189
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
++ + H LN +S+E K G C
Sbjct: 190 -IEPFSEGHGV-----DLN-SSKEKKEGGGCC 214
>gi|442749927|gb|JAA67123.1| Putative gtp-binding protein-like ras superfamily [Ixodes ricinus]
Length = 229
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 126/180 (70%), Gaps = 3/180 (1%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y+K D + L+K+LV+GE G GKTS+I+RY F+ Y+ TIGVDF+LK + +D++
Sbjct: 17 YNKY-DVEDLLFKVLVVGEFGVGKTSLIRRYTEGVFNQAYKITIGVDFSLKHIVYDNKKH 75
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
I LQLWDIAG ERFG MTRVYYK A A +V+D++R T +VLKWK DL KV +G+
Sbjct: 76 ITLQLWDIAGHERFGCMTRVYYKYATAAIVVYDLSRPTTLHSVLKWKADLTEKVEQQNGH 135
Query: 568 PIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
PIP VL+ANKCD EG N + F +EH F GWF TSAK+NINI+++ +LV+ IL
Sbjct: 136 PIPVVLVANKCDL--EGSTINARFLTNFCQEHGFVGWFFTSAKENININESINSLVEHIL 193
>gi|307180723|gb|EFN68613.1| Ras-related protein Rab-32 [Camponotus floridanus]
Length = 219
Score = 200 bits (508), Expect = 2e-48, Method: Composition-based stats.
Identities = 94/173 (54%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY FS +Y+ TIG DFA+K L WD T I LQLWD
Sbjct: 21 KEHLFKFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKTLDWDPHTKINLQLWD 80
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG MTRVYYK AV A +VFD++RAATF ++ KW DL K+TLP+G+ IP +LL
Sbjct: 81 IAGHERFGYMTRVYYKYAVAAALVFDISRAATFQSMKKWLCDLREKITLPNGSDIPIILL 140
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
ANKCD +A +I +F KE+ + W+ TSAK+N N+D A + LV+K+L
Sbjct: 141 ANKCDI---SVAVTDEQISKFCKENKINAWYATSAKNNTNVDTAMRYLVEKVL 190
>gi|148233848|ref|NP_001085684.1| MGC80435 protein [Xenopus laevis]
gi|49118197|gb|AAH73193.1| MGC80435 protein [Xenopus laevis]
Length = 204
Score = 199 bits (507), Expect = 3e-48, Method: Composition-based stats.
Identities = 92/186 (49%), Positives = 131/186 (70%), Gaps = 4/186 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+LV+G+ GKTS+++RYVH F Y+ T+GVDFALKV+ W +RLQLWDI
Sbjct: 5 DHLFKVLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFALKVVQWSDAETVRLQLWDI 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTR+YYK+A I+FD+T A +F WK DLD KVTLP+G+ +PC+LLA
Sbjct: 65 AGQERFASMTRLYYKQASACVIMFDLTNAESFRNCQMWKDDLDNKVTLPNGDFVPCILLA 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD ++ +ID+F KE+NF GW ETS K+NINI+++ + L+ +++ + Q+
Sbjct: 125 NKCDLSPWAVSRE--QIDQFSKENNFIGWTETSVKENININESMRVLIGRMMASK--QSG 180
Query: 636 GDSHAT 641
S +T
Sbjct: 181 NSSFST 186
>gi|166157852|ref|NP_001107338.1| uncharacterized protein LOC100135159 [Xenopus (Silurana)
tropicalis]
gi|163916398|gb|AAI57147.1| LOC100135159 protein [Xenopus (Silurana) tropicalis]
Length = 204
Score = 199 bits (505), Expect = 5e-48, Method: Composition-based stats.
Identities = 91/187 (48%), Positives = 130/187 (69%), Gaps = 7/187 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+LV+G+ GKTS+++RYVH F Y+ T+GVDFALKV+ W +RLQLWDI
Sbjct: 5 DHLFKVLVVGDSTVGKTSLLQRYVHDVFGKDYKMTMGVDFALKVVQWSDTETVRLQLWDI 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTR+YYK+A I+FD+T + +F WK DLD KV LP+G+ +PC+LLA
Sbjct: 65 AGQERFASMTRLYYKQASACVIMFDLTNSESFRNCQMWKDDLDNKVILPNGDFVPCILLA 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE-----ND 630
NKCD ++ +ID+F KE+NF GW ETS K+NINI+++ + L+++++ N
Sbjct: 125 NKCDLSPWAVSRQ--QIDQFSKENNFIGWTETSVKENININESMRVLIERMMASREAGNS 182
Query: 631 KVQANGD 637
A+GD
Sbjct: 183 SFPAHGD 189
>gi|323450441|gb|EGB06322.1| hypothetical protein AURANDRAFT_13379, partial [Aureococcus
anophagefferens]
Length = 177
Score = 196 bits (499), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 125/179 (69%), Gaps = 20/179 (11%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH--------------- 504
K+LV+G+ GKTSIIKRYVH FFS H+R T+GVDFALK L+
Sbjct: 1 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVGRRAGAARVPPRVATAR 60
Query: 505 ---ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKV 561
+T +RLQLWDIAGQ+RFG + RVYYK+A GAF+V+D++R TF ++KWK ++D+KV
Sbjct: 61 DRRDTTVRLQLWDIAGQDRFGAIARVYYKDAFGAFLVYDISRPETFKTIVKWKDEIDSKV 120
Query: 562 TLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
LP+G +P VLLANKCD E +A + ++D+F + H F GWFETSAK ++NID AA+
Sbjct: 121 HLPNGMALPVVLLANKCDL--EDVAIDRQELDDFCRSHGFIGWFETSAKADVNIDTAAR 177
>gi|405965375|gb|EKC30753.1| WD repeat-containing protein 82 [Crassostrea gigas]
Length = 517
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 145/213 (68%), Gaps = 8/213 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+++IG+ GKTS ++RYV+ + Y+ TIGVDFALKV+ W I+LQLWDI
Sbjct: 308 EILFKVIIIGDPTVGKTSFVQRYVNDAYRRDYKMTIGVDFALKVVKWSESQTIKLQLWDI 367
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTRVYYK+A I+FD+T+ +TF +KWK+DLD K +L DG+PIPC+LLA
Sbjct: 368 AGQERFTSMTRVYYKDAHACIIMFDLTQQSTFQNAVKWKKDLDTKCSLADGSPIPCLLLA 427
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + I++ KEH+F GW ETS K+ + I+++ + L ++++ + +
Sbjct: 428 NKCDLSHREV--QQSDIEDMCKEHDFVGWTETSVKEGLMIEESMRFLCEEMMTK-HAELD 484
Query: 636 GDSHATSEAVF---SLNRNSQETKNGRN--CAC 663
G S++ + ++ +++ SQ+T++ + C+C
Sbjct: 485 GFSNSMARSMVPGSTIHLRSQQTEHKESSVCSC 517
>gi|320167316|gb|EFW44215.1| small GTPase rabE [Capsaspora owczarzaki ATCC 30864]
Length = 265
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E ++K+++IGE GKT++I+RYV + Y++T+GVDFALKV+ + +RLQLWDI
Sbjct: 43 EHVFKVIIIGEGTTGKTALIRRYVDNTWDRTYKSTLGVDFALKVIDISKQEHVRLQLWDI 102
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTRVYY+ A A +VFD+T+ +F V WK D+D+KV LP+ IPC+L+A
Sbjct: 103 AGQERFQHMTRVYYRSAAAAVVVFDLTQRWSFQKVRGWKADVDSKVRLPNNEVIPCMLIA 162
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD P ++ +IDEF +E F WFETSAK+NINI+ A KTLV IL
Sbjct: 163 NKCDLPDRQVSRE--EIDEFAREMGFLCWFETSAKENINIEKAIKTLVSHIL 212
>gi|340720074|ref|XP_003398468.1| PREDICTED: ras-related protein Rab-32-like [Bombus terrestris]
Length = 219
Score = 196 bits (497), Expect = 5e-47, Method: Composition-based stats.
Identities = 93/174 (53%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY F+ +Y+ TIG DFA+K + WD T I LQLWD
Sbjct: 20 KELLFKFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDWDRFTKINLQLWD 79
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
+AG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVT PDG+ IP VLL
Sbjct: 80 VAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLSDLREKVTFPDGSEIPVVLL 139
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
ANKCD P + + +I +F KE+N W+ TSAK+N NID A + LV+ +L+
Sbjct: 140 ANKCDIPCPVVPSE--QIAKFCKENNIGAWYVTSAKENTNIDVAMRYLVENVLK 191
>gi|449280941|gb|EMC88156.1| Ras-related protein Rab-7L1, partial [Columba livia]
Length = 169
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 122/174 (70%), Gaps = 12/174 (6%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+R+ ++K+LV+G+ GKTS+++RY + F+ HY++T+GVDFALKV+ W +RLQLW
Sbjct: 3 QRDRMFKVLVVGDATVGKTSLVQRYANDSFNRHYKSTVGVDFALKVVQWSESETVRLQLW 62
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAGQERF +MTR+YY++A I+FDVT +TF KWKQDLD+K+ LPDG+P+PC+L
Sbjct: 63 DIAGQERFTSMTRLYYRDASACVIMFDVTNVSTFSNSQKWKQDLDSKLVLPDGSPVPCLL 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
LANKCD + + GW ETS K+N NI+++ + L++K++
Sbjct: 123 LANKCDLSPWAVTRDEV------------GWVETSVKENKNINESMRVLIEKMM 164
>gi|440795581|gb|ELR16701.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 249
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 129/190 (67%), Gaps = 20/190 (10%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRA------------TIGVDFALKVL 500
++RE ++KILV+G++GAGKT+II+R V FS Y+ TIGVDFALK +
Sbjct: 31 NRRELVFKILVVGDIGAGKTAIIRRAVDNIFSDAYKGRTRKPDPDPTQSTIGVDFALKSV 90
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+ +T LQLWDIAGQER+GN+TRVYYKEAV A +VFD+TR A+F+AV KWK D+DAK
Sbjct: 91 KLNPKTTTWLQLWDIAGQERYGNLTRVYYKEAVAALVVFDLTRPASFEAVRKWKSDIDAK 150
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDD 617
V L +G+PIPC+L+ANK D + N P ++++ KEH F W TSAK ++ I +
Sbjct: 151 VALANGDPIPCILVANKSD-----LVNVPLNEDVMNQYCKEHGFLDWMVTSAKKDVGITE 205
Query: 618 AAKTLVQKIL 627
A + Q I+
Sbjct: 206 AMTAITQHIM 215
>gi|350408446|ref|XP_003488406.1| PREDICTED: ras-related protein Rab-32-like [Bombus impatiens]
Length = 219
Score = 194 bits (494), Expect = 1e-46, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 122/179 (68%), Gaps = 12/179 (6%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY F+ +Y+ TIG DFA+K + WD T I LQLWD
Sbjct: 20 KELLFKFLVIGDYGVGKTALVRRYTEGRFTSNYKITIGADFAIKAVDWDRFTKINLQLWD 79
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
+AG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVTLPDG+ IP VLL
Sbjct: 80 VAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTLPDGSEIPVVLL 139
Query: 575 ANKCD-----QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
ANKCD P E IA F KE+N W+ TSAK+N NID A + LV+ +L+
Sbjct: 140 ANKCDISCPSVPIEQIA-------RFCKENNIGAWYVTSAKENTNIDVAMRYLVENVLK 191
>gi|110760060|ref|XP_001120743.1| PREDICTED: ras-related protein Rab-32-like [Apis mellifera]
Length = 218
Score = 194 bits (493), Expect = 1e-46, Method: Composition-based stats.
Identities = 94/174 (54%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY F+ +Y+ TIG DFA+K L WD T I LQLWD
Sbjct: 20 KELLFKFLVIGDYGVGKTALVRRYTEGKFTSNYKITIGADFAIKTLDWDPLTKINLQLWD 79
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
+AG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVTLPDG+ IP VLL
Sbjct: 80 VAGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLCDLREKVTLPDGSNIPVVLL 139
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
ANKCD P + +I F KE+N W+ TSAK+N N+D A + LV+ +L+
Sbjct: 140 ANKCDIPCPVVPTE--QIARFCKENNIGAWYVTSAKENTNVDVAMRYLVENVLK 191
>gi|260809841|ref|XP_002599713.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
gi|229284994|gb|EEN55725.1| hypothetical protein BRAFLDRAFT_287780 [Branchiostoma floridae]
Length = 168
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 119/168 (70%), Gaps = 5/168 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+KIL+IG+ GKTS ++RYV+ F Y+AT+GVDFALKV+ E +R QLWD+
Sbjct: 3 ERLFKILIIGDATVGKTSFVQRYVNDSFKREYKATVGVDFALKVIQISEEDTVRFQLWDV 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTRVYYK+A I+FDVT TF +KWK+DLD+KV+LPDG +PC+LLA
Sbjct: 63 AGQERFTSMTRVYYKDASACVIIFDVTAKQTFHNCIKWKKDLDSKVSLPDGRCVPCMLLA 122
Query: 576 NK---CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
NK D ++ + +++EF KEHNF GW E S KDN+N+ ++ K
Sbjct: 123 NKASAIDLQEKAVTEE--EVNEFCKEHNFIGWTEISVKDNVNVKESMK 168
>gi|312075015|ref|XP_003140228.1| Ras family protein [Loa loa]
gi|307764604|gb|EFO23838.1| Ras family protein [Loa loa]
Length = 239
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 128/185 (69%), Gaps = 6/185 (3%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P K +FL+KIL+IG++G GK+SI++RY H F+ HY+AT+GVDFA + L T +RLQ
Sbjct: 24 PSKDQFLFKILIIGDVGTGKSSIVQRYAHNLFTQHYKATVGVDFATRTLLLSDGTTLRLQ 83
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDI+GQ+RF NMTRVYYK+A GA +VFD TR T+D L+WK DLD+K+TL P+P
Sbjct: 84 LWDISGQDRFSNMTRVYYKDAHGAIVVFDCTRQNTYDGALRWKTDLDSKITLATEKPLPS 143
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
+L+ANK D + K++E+ ++ F +TSAK N I+D+ LV++ILE
Sbjct: 144 ILVANKADLDNK---ITDEKLEEYREKGGFLNVLKTSAKANYGIEDSFDLLVEQILE--- 197
Query: 632 VQANG 636
++ NG
Sbjct: 198 IKKNG 202
>gi|328716362|ref|XP_003245910.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2
[Acyrthosiphon pisum]
Length = 260
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP+K L+K+++IG+ GKT+ +KRYV + FS Y+ T+GVDFALK++ I+L
Sbjct: 60 MPEK---LFKVIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKL 116
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQERF MTRVYYK+A G I+FD++ +F LKWK+D+DAK T DG PIP
Sbjct: 117 QLWDIAGQERFTWMTRVYYKDAHGCVIMFDLSNKNSFLNTLKWKKDVDAKCTQLDGGPIP 176
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
C+LL NKCD P+ I + I+ F KE+NF GW ETSAKD + ++D+ + L+ ++
Sbjct: 177 CMLLGNKCDLPQRQI--DQLDIEAFYKENNFIGWTETSAKDGLMVNDSMQFLINSMM 231
>gi|321478953|gb|EFX89909.1| hypothetical protein DAPPUDRAFT_39774 [Daphnia pulex]
Length = 175
Score = 192 bits (487), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/165 (52%), Positives = 118/165 (71%), Gaps = 2/165 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+++IG+ G GKTS I+RYV F Y+ATIGVDFALK++ W I+LQLWDI
Sbjct: 13 EKLFKVIIIGDPGVGKTSFIRRYVQNAFRGDYKATIGVDFALKIVRWSENQTIKLQLWDI 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF MTRVYYKEA G I+FD+T +F+ +KWK+D+D+K L DG P+PC+LLA
Sbjct: 73 AGQERFTWMTRVYYKEAQGCIIMFDLTSRNSFENAVKWKKDVDSKCVLEDGAPVPCMLLA 132
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
NKCD + + + +I+ +EH+F GW ETSAKD++ + D +
Sbjct: 133 NKCDLRQREV--DQWEIETLCREHSFIGWTETSAKDDLMVGDCMR 175
>gi|193631807|ref|XP_001951808.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1
[Acyrthosiphon pisum]
Length = 201
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP+K L+K+++IG+ GKT+ +KRYV + FS Y+ T+GVDFALK++ I+L
Sbjct: 1 MPEK---LFKVIIIGDPTVGKTAFVKRYVQKSFSREYKGTVGVDFALKIIKVSETETIKL 57
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQERF MTRVYYK+A G I+FD++ +F LKWK+D+DAK T DG PIP
Sbjct: 58 QLWDIAGQERFTWMTRVYYKDAHGCVIMFDLSNKNSFLNTLKWKKDVDAKCTQLDGGPIP 117
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
C+LL NKCD P+ I + I+ F KE+NF GW ETSAKD + ++D+ + L+ ++
Sbjct: 118 CMLLGNKCDLPQRQI--DQLDIEAFYKENNFIGWTETSAKDGLMVNDSMQFLINSMM 172
>gi|307198015|gb|EFN79075.1| Ras-related protein Rab-32 [Harpegnathos saltator]
Length = 217
Score = 191 bits (486), Expect = 7e-46, Method: Composition-based stats.
Identities = 93/174 (53%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E L+K LVIG+ G GKT++++RY FS +Y+ TIG DFA+K L WD T I LQLW
Sbjct: 19 QKEHLFKFLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKSLDWDPHTKINLQLW 78
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DIAG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVTL DG+ IP VL
Sbjct: 79 DIAGHERFGYMTRVYYKYAVAAALVFDISRMATFQSMKKWLCDLREKVTLSDGSSIPIVL 138
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
LANKCD +A ++ +F +E++ W+ TSAK+N N+D A + LV+K+L
Sbjct: 139 LANKCDI---SVAVTNEQVAKFCRENSIDAWYATSAKNNTNVDAAMRYLVEKVL 189
>gi|345495964|ref|XP_001599144.2| PREDICTED: ras-related protein Rab-32-like [Nasonia vitripennis]
Length = 138
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 108/140 (77%), Gaps = 2/140 (1%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTRVYYKEAVGAFIVFDVTR+ATFDAV+KWKQDLD+KV L DG+PIPCVLLANKCDQ KE
Sbjct: 1 MTRVYYKEAVGAFIVFDVTRSATFDAVVKWKQDLDSKVQLSDGSPIPCVLLANKCDQQKE 60
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSE 643
GI N P K+D++ KE NF+ WFETSAK+NINI++AAK LV KIL+ND ++ N
Sbjct: 61 GIVNLPIKMDDYCKEKNFAAWFETSAKENINIEEAAKFLVHKILQNDNIKDNSIDEHYDG 120
Query: 644 AVFSLNRNSQETKNGRNCAC 663
SLN++ K + C C
Sbjct: 121 IKLSLNQSPDRLK--KICYC 138
>gi|332020863|gb|EGI61261.1| Ras-related protein Rab-32 [Acromyrmex echinatior]
Length = 218
Score = 191 bits (485), Expect = 1e-45, Method: Composition-based stats.
Identities = 98/196 (50%), Positives = 129/196 (65%), Gaps = 10/196 (5%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GKT++++RY FS +Y+ TIG DFA+K L WD +T I LQLWD
Sbjct: 20 KEHLFKCLVIGDYGVGKTALVRRYTEGKFSSNYKITIGADFAIKTLDWDPQTKINLQLWD 79
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KV LPDG+ IP VLL
Sbjct: 80 IAGHERFGYMTRVYYKYAVAAALVFDISRVATFQSMKKWLNDLREKVALPDGSSIPVVLL 139
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN----- 629
ANKCD +A +I +F KE+ W+ TSAK+N N++ A + LV K+L +
Sbjct: 140 ANKCDI---SVAVTNEQISKFCKENKIHAWYATSAKNNTNVEAAIRYLVDKVLNSRFDNG 196
Query: 630 --DKVQANGDSHATSE 643
D +Q S ++ E
Sbjct: 197 IRDSIQLRHKSTSSRE 212
>gi|359318450|ref|XP_003638811.1| PREDICTED: ras-related protein Rab-32-like [Canis lupus familiaris]
Length = 209
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 103/123 (83%), Gaps = 1/123 (0%)
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
R L + GQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G+P
Sbjct: 60 RGMLCKVPGQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGSP 119
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCDQ K+G NP ++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL
Sbjct: 120 IPAVLLANKCDQKKDG-GQNPPQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILA 178
Query: 629 NDK 631
N +
Sbjct: 179 NHQ 181
>gi|391330189|ref|XP_003739546.1| PREDICTED: ras-related protein Rab-32B-like [Metaseiulus
occidentalis]
Length = 201
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 126/181 (69%), Gaps = 8/181 (4%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
++FL+K+LV+G+ G GKT+I++RY FS +Y+ TIGVDF +K L W I LQ+WD
Sbjct: 9 QDFLFKVLVVGDFGVGKTAIVRRYTEGEFSQNYKITIGVDFLIKRLRWHPNKQITLQMWD 68
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG++TRVYYK A A +V+D++R T ++++KW++DL K D +P +LL
Sbjct: 69 IAGHERFGSLTRVYYKYATAAVLVYDLSRPTTLESIIKWREDLREKT---DDARLPTLLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD I+ + +D+F K+H WF TSAK+N+N+D+A LV++ILE D VQ+
Sbjct: 126 ANKCD-----ISQDWPDLDKFCKQHGIDAWFPTSAKENVNVDEAINFLVERILEGDSVQS 180
Query: 635 N 635
+
Sbjct: 181 H 181
>gi|390368195|ref|XP_003731406.1| PREDICTED: ras-related protein Rab-32B-like [Strongylocentrotus
purpuratus]
Length = 239
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 106/147 (72%), Gaps = 2/147 (1%)
Query: 482 FFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDV 541
+FSP+Y+ TIGVDFALK L WD T + LQLWDIAG ERFG+MTRVYYK A+ A IVFD+
Sbjct: 45 YFSPNYKLTIGVDFALKSLDWDENTRVNLQLWDIAGHERFGHMTRVYYKYAIAAVIVFDL 104
Query: 542 TRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNF 601
+R ATFD+VLKW D+ KV L + P+P +LLANKCD P + + +D F KE+ F
Sbjct: 105 SRPATFDSVLKWSTDVHEKVMLANEQPVPLLLLANKCDLPDTVL--DADMLDHFCKENKF 162
Query: 602 SGWFETSAKDNINIDDAAKTLVQKILE 628
GWF TSAKD+ N+ DA LV+ IL+
Sbjct: 163 IGWFGTSAKDDTNVTDAMSYLVETILQ 189
>gi|443693582|gb|ELT94920.1| hypothetical protein CAPTEDRAFT_101663 [Capitella teleta]
Length = 174
Score = 187 bits (476), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/165 (49%), Positives = 119/165 (72%), Gaps = 2/165 (1%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K+L IG+ G GKTS+++RYVH +++ Y+AT+GVDFALK++ W I+LQLWDIAGQ
Sbjct: 5 FKLLTIGDPGVGKTSLVQRYVHGYYTKDYKATLGVDFALKLVKWSDNVTIKLQLWDIAGQ 64
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +MTRVYY++A I+FD+T+ ++F LKWK DLD+K DG+ +PC+LLANKC
Sbjct: 65 ERFTSMTRVYYRDAHACIIMFDLTQRSSFQNALKWKADLDSKCCQEDGSSVPCILLANKC 124
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
D + + N +I+ F +E NF GW E S K+ + ++++ + LV
Sbjct: 125 DLSRREV--NQDEIESFCREQNFIGWTEVSVKEGLMVEESMRYLV 167
>gi|443697719|gb|ELT98053.1| hypothetical protein CAPTEDRAFT_110893 [Capitella teleta]
Length = 186
Score = 187 bits (475), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/161 (52%), Positives = 119/161 (73%), Gaps = 2/161 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+L+K+LVIGE G GKTSII+RY +F P Y+ TIGVDF++K + W+ T + +QLWD
Sbjct: 17 KEYLFKVLVIGEFGVGKTSIIRRYTEGYFVPSYKMTIGVDFSMKSIPWNPMTHVNIQLWD 76
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG+MTRVYYK A+ A +VFD++R++T +AV KW + + +KV L + +PIPC L
Sbjct: 77 IAGHERFGHMTRVYYKYAMAAIVVFDLSRSSTLEAVSKWIEGVRSKVMLTEDDPIPCFLF 136
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINI 615
ANKCD + I + +++ F +++N WF TSAKD+INI
Sbjct: 137 ANKCD--IDSIEIDTVEMNNFCQQNNIETWFPTSAKDDINI 175
>gi|71663090|ref|XP_818542.1| small GTP-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70883800|gb|EAN96691.1| small GTP-binding protein, putative [Trypanosoma cruzi]
Length = 243
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 131/236 (55%), Gaps = 30/236 (12%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIRLQLWD 514
E L+K+L+IGE G GKT +I+RYVH F +ATIGVDFALK V+ I LQLWD
Sbjct: 8 ELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNITLQLWD 67
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVL 573
IAGQER+G MTRVYY+ A GA IV D+TR T D +KWKQD+D+KV L G IPC+L
Sbjct: 68 IAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDVDSKVFLGSSGKSIPCIL 127
Query: 574 LANKCDQPKEGI---------ANNPAKIDE------------FIKEHNFSGWFETSAKDN 612
L NK D G+ +P DE F EH F WF TSAK+N
Sbjct: 128 LINKVDLLPHGVLAASVAEDGTGHPGFADERGIQKTKEEMNAFCTEHGFEAWFVTSAKEN 187
Query: 613 INIDDAAKTLVQKILE-------NDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
N+D A + LV +L+ + Q TS V NR +E K+G +C
Sbjct: 188 KNVDVAFQKLVDCVLKATDALGGTETAQEAAKEKNTSGKVLHGNRTRREEKSGCSC 243
>gi|189522743|ref|XP_001340450.2| PREDICTED: ras-related protein Rab-32 [Danio rerio]
Length = 208
Score = 186 bits (472), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/173 (50%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+LVIG+ GK+S +KRYV F + +IGVDF++KV+ WD T +RLQLWDI
Sbjct: 11 EHLFKVLVIGDHKVGKSSFVKRYVRNQFYEELKTSIGVDFSMKVIDWDAHTRVRLQLWDI 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER + RVY++ + GAF+V+D+T ++ D L WK++LD +V L +G+PIP VLLA
Sbjct: 71 AGQERVRGLNRVYFRGSSGAFVVYDLTNGSSLDGALNWKRELDCQVMLKNGHPIPAVLLA 130
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD+ K N + +++ +E F+G F+TSAK+NIN+D+AAK LV+ IL+
Sbjct: 131 NKCDETKVS-RRNASLLEKLCQEKGFTGCFQTSAKENINVDEAAKFLVKHILQ 182
>gi|348517128|ref|XP_003446087.1| PREDICTED: ras-related protein Rab-7L1-like [Oreochromis niloticus]
Length = 207
Score = 186 bits (471), Expect = 4e-44, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 136/216 (62%), Gaps = 22/216 (10%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L KIL++G+ GK+S + RYV F+ Y+ T+GVDF++K+L W + +RLQLWDI
Sbjct: 3 EHLLKILIVGDGNVGKSSFVHRYVSGQFNKTYKMTVGVDFSVKLLRWSDKEKVRLQLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTR+YYK A+G ++FDVT +++F + WKQDLD K LP+G+ IPC+L+A
Sbjct: 63 AGQERFISMTRIYYKGALGCVVMFDVTSSSSFSSCRHWKQDLDNKAMLPNGDSIPCILVA 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD ++ + ID+F K H F W ETS KDN N+++A + L Q+IL VQ+
Sbjct: 123 NKCDLAHRAVSAD--TIDKFSKAHGFITWMETSVKDNKNVEEAMRMLAQEILS---VQST 177
Query: 636 GD----------SHATSEAVFSLNRNSQETKNGRNC 661
D H SE NR+S E GR C
Sbjct: 178 MDPIHRPEFRVYPHPDSE----FNRSSGE---GRGC 206
>gi|242013254|ref|XP_002427327.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511676|gb|EEB14589.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 202
Score = 185 bits (470), Expect = 5e-44, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 122/177 (68%), Gaps = 4/177 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+++IG+ GKTS ++RYV + Y+ T+GVDFALK+L W I+LQLWDI
Sbjct: 16 EKLFKVIIIGDPTVGKTSFVQRYVENTYKRDYKGTVGVDFALKILKWSDTQTIKLQLWDI 75
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF MTRVYYK+A G I+FD+T +F LKWK+D+D+K +LPDG PIPC+LLA
Sbjct: 76 AGQERFTWMTRVYYKDAHGCVIMFDLTNKNSFVNTLKWKRDVDSKCSLPDGRPIPCMLLA 135
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NKCD + + +I+EF KE+NF GW ETSAK+ ++D+ + L N KV
Sbjct: 136 NKCDLSRRSVEQ--VEIEEFHKENNFCGWTETSAKEGDMVNDSMNAITN--LTNMKV 188
>gi|407853753|gb|EKG06607.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 243
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/236 (43%), Positives = 130/236 (55%), Gaps = 30/236 (12%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIRLQLWD 514
E L+K+L+IGE G GKT +I+RYVH F +ATIGVDFALK V+ I LQLWD
Sbjct: 8 ELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNITLQLWD 67
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVL 573
IAGQER+G MTRVYY+ A GA IV D+TR T D +KWKQD+D+KV L G IPC+L
Sbjct: 68 IAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDVDSKVFLGSSGKSIPCIL 127
Query: 574 LANKCD---------------------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
L NK D + GI +++ F EH F WF TSAK+N
Sbjct: 128 LINKVDLLPHGVLTASIAEDSTGHLGFADERGIQKTKEEMNAFCTEHGFEAWFVTSAKEN 187
Query: 613 INIDDAAKTLVQKILE-------NDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
N+D A + LV +L+ + Q T V NR +E K+G +C
Sbjct: 188 KNVDVAFQKLVDCVLKATDALGGTETAQVAAKEKNTGGKVLHGNRTRREEKSGCSC 243
>gi|432959688|ref|XP_004086364.1| PREDICTED: ras-related protein Rab-7L1-like [Oryzias latipes]
Length = 204
Score = 184 bits (467), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 130/206 (63%), Gaps = 5/206 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L KIL++G+ GK+S + RY+ F+ Y+ T+GVDFA+K+L W E +RLQLWDI
Sbjct: 3 EHLLKILIVGDGNVGKSSFVNRYISGNFNRTYKMTVGVDFAVKLLHWSDEEKVRLQLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTR+YYK AVG ++FD++ +++F + WKQDLD K LP+G+ IPC+LLA
Sbjct: 63 AGQERFISMTRIYYKGAVGCIVMFDISSSSSFLSCRLWKQDLDHKAMLPNGDTIPCLLLA 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + ++ + ID+F + F W E S K+N N+ +A + LVQ+IL V
Sbjct: 123 NKCDLAERAVSAD--TIDQFSGANGFFTWMEASVKENKNVGEAMRRLVQEILS---VHLK 177
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNC 661
+VF + T GR+C
Sbjct: 178 PSQPLPEGSVFLQQDSEFNTDTGRSC 203
>gi|341903548|gb|EGT59483.1| CBN-GLO-1 protein [Caenorhabditis brenneri]
Length = 212
Score = 184 bits (466), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/203 (46%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LVIG+ G GKTSII+R+VH FS +Y+ TIGVDFALK+L D T++ LQ+WDI+GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
+R+G MTRVYYK+A A IV D TR T + L+WK DLD KVTL DG+P+P +LLANKC
Sbjct: 72 DRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKC 131
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
D + + ++ K+ + + F G F TSAK+++ I++A K L ++ ++
Sbjct: 132 DIDNQ-LGDD--KLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTVISTEQGGQYDVP 188
Query: 639 HATSEAVFSLNRNSQETKNGRNC 661
E +L+ NS K+ C
Sbjct: 189 FLNREGNVNLDDNSTHYKHDSKC 211
>gi|407421093|gb|EKF38806.1| rab1 small GTP-binding protein, putative [Trypanosoma cruzi
marinkellei]
Length = 244
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 131/237 (55%), Gaps = 31/237 (13%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIRLQLWD 514
E L+K+L+IGE G GKT +I+RYVH F +ATIGVDFALK V+ I LQLWD
Sbjct: 8 ELLFKVLIIGEGGTGKTCLIRRYVHGIFLATNKATIGVDFALKDVVHAATNRNITLQLWD 67
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVL 573
IAGQER+G MTRVYY+ A GA IV D+TR T D +KWKQD+D+KV L G IPC+L
Sbjct: 68 IAGQERYGQMTRVYYQAAAGAIIVADITRPETLDLAVKWKQDVDSKVFLGSSGKSIPCIL 127
Query: 574 LANKCD---------------------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDN 612
L NK D + GI +++ F KEH F WF TSAK+N
Sbjct: 128 LINKVDLLPNGMLAASAAEDGTGHSGFADERGIQKTKEEMNAFCKEHGFEAWFVTSAKEN 187
Query: 613 INIDDAAKTLVQKILENDKVQANGDSHATSEA--------VFSLNRNSQETKNGRNC 661
N+D A + LV +L+ ++ + A V NR +E K G +C
Sbjct: 188 KNVDVAFQKLVDCVLKATDALGGTETIGSDAAKEKNTGGKVLHGNRTRREEKPGCSC 244
>gi|426354839|ref|XP_004044851.1| PREDICTED: uncharacterized protein LOC101152891 [Gorilla gorilla
gorilla]
Length = 312
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/114 (70%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLLANK
Sbjct: 172 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 231
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
CDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 232 CDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 284
>gi|156403879|ref|XP_001640135.1| predicted protein [Nematostella vectensis]
gi|156227268|gb|EDO48072.1| predicted protein [Nematostella vectensis]
Length = 165
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 112/167 (67%), Gaps = 12/167 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E L+K+L++G+ GKTS ++RYVH Y+ TIGVDFALKV+ W + +RLQLWDI
Sbjct: 3 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIGVDFALKVIPWAQDATVRLQLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +MTRVYYK A I+FD+T TF++ +KWK DLD+K LP+G PIPC+L+
Sbjct: 63 AGQERFTSMTRVYYKGAAACVIMFDLTSQQTFNSTIKWKNDLDSKCKLPNGKPIPCILVG 122
Query: 576 NKCDQ-----PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD 617
NK D PKE ID+ ++H+F GW E S K+ +N+ +
Sbjct: 123 NKSDLSARPVPKE-------TIDKLCRDHSFLGWTEMSVKEEVNVSE 162
>gi|428167843|gb|EKX36796.1| hypothetical protein GUITHDRAFT_175417 [Guillardia theta CCMP2712]
Length = 217
Score = 182 bits (461), Expect = 7e-43, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 5/215 (2%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S P + ++ +K+LV+G+ GKTSII RYVH F HY+ T+GVDFALKV+ +II
Sbjct: 8 SANPPRTDYAFKVLVVGDPRVGKTSIINRYVHGSFDIHYKLTLGVDFALKVIH-RPSSII 66
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
RLQL DIAGQE+ G MTRVYY++A A +VFDVTR T +V WKQD+D+K++LPDG
Sbjct: 67 RLQLRDIAGQEKAGTMTRVYYRDANAAVVVFDVTRNITLQSVKIWKQDIDSKLSLPDGRR 126
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
IP VLLANKCD + A + + + E F GWF TSAKD+ N+ +A L+ + +
Sbjct: 127 IPAVLLANKCDLDADP-AVTEQVLQDLVTEDQFIGWFLTSAKDDKNVAEAFNFLIDRAIS 185
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + + SL SQ + G NC+C
Sbjct: 186 DYEATRRFQQDNRPQGTISL---SQNERRGGNCSC 217
>gi|71994817|ref|NP_001024837.1| Protein GLO-1 [Caenorhabditis elegans]
gi|63108011|emb|CAE17932.2| Protein GLO-1 [Caenorhabditis elegans]
gi|66170981|gb|AAY42967.1| Rab GTPase GLO-1 [Caenorhabditis elegans]
Length = 212
Score = 181 bits (460), Expect = 8e-43, Method: Composition-based stats.
Identities = 94/205 (45%), Positives = 130/205 (63%), Gaps = 7/205 (3%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LVIG+ G GKTSII+R+VH FS +Y+ TIGVDFALK+L D T++ LQ+WDI+GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
+R+G MTRVYYK+A A IV D TR T + L+WK DLD KVTL DG+P+P +LLANKC
Sbjct: 72 DRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKC 131
Query: 579 DQPKEGIANNPA--KIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANG 636
D I N K+ + + F G F TSAK+++ I++A K L ++ ++
Sbjct: 132 D-----IDNKLGDDKLYDLETNNGFVGSFRTSAKESVGIEEAFKFLANTVISTEQGGQYD 186
Query: 637 DSHATSEAVFSLNRNSQETKNGRNC 661
E +L+ N+ ++ C
Sbjct: 187 VPFMNREGNVNLDDNTTHSRYDSKC 211
>gi|330791275|ref|XP_003283719.1| Rab GTPase [Dictyostelium purpureum]
gi|325086342|gb|EGC39733.1| Rab GTPase [Dictyostelium purpureum]
Length = 195
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKILV+G++G GKTSI + V+ FS Y TIGVDF LKV++WD +T +RLQLWDI+G
Sbjct: 14 YKILVVGDIGTGKTSITRSLVYDTFSKRYNPTIGVDFGLKVINWDPKTEVRLQLWDISGS 73
Query: 519 ERF---GNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
ER MTRVYY AVGA I FDVT +TF WK +D PIP VLLA
Sbjct: 74 ERLSIKSQMTRVYYNNAVGAMITFDVTGMSTFKGAAIWKAGIDQVTNDSKVKPIPVVLLA 133
Query: 576 NKCDQPKEG---IANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
NK D EG +D++ K++ F GWF+ SAKDN+NI+ AA+ LV IL+ND
Sbjct: 134 NKWDLVNEGKDSFIKTENDMDKYCKDNGFIGWFKISAKDNMNIEKAARFLVDHILKND 191
>gi|440799686|gb|ELR20730.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 219
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 112/152 (73%), Gaps = 4/152 (2%)
Query: 477 RYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAF 536
RY +F+P+Y+ TIGVDFA+K + WD +T + LQ D+AG ERFG MTRVYYK A+ A
Sbjct: 26 RYCEGYFTPNYKLTIGVDFAVKQVQWDDKTTVSLQ--DVAGHERFGQMTRVYYKYAIAAI 83
Query: 537 IVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFI 596
IVFD++R ATF+AV KW++D+ +KV L + PIP +LLANKCD P G+ + +D++
Sbjct: 84 IVFDLSRPATFEAVAKWREDVHSKVMLANDQPIPILLLANKCDIP--GVTVDTEALDKYS 141
Query: 597 KEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+++ F GWF +SA +N NIDDA K +++K+LE
Sbjct: 142 QDNGFVGWFPSSAANNTNIDDAMKFMIEKVLE 173
>gi|225709988|gb|ACO10840.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 321
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 124/175 (70%), Gaps = 3/175 (1%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK++VIG++ GK++ I+RY F+ +Y AT+GVDF LKV+ +H IRLQLWDIAG
Sbjct: 17 LYKVIVIGDVNTGKSAFIRRYTDGSFAENYLATVGVDFHLKVIQLEHNVEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+ +VGAFI++D T ++F AV+KWK++LD K +LP+G IP +L+ANK
Sbjct: 77 QERFSRMTRAYFTGSVGAFIIYDSTDLSSFRAVVKWKKELDLKCSLPEGQNIPAILIANK 136
Query: 578 CD-QPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILEND 630
D +P G+ N ++ +F+KE+ F WF TSAK NI+++ +++ IL+ D
Sbjct: 137 NDLEPCAGLPNEE-EMSQFLKENGFIPIWFRTSAKTGENIEESIDLMLKLILKID 190
>gi|225707160|gb|ACO09426.1| Ras-related protein Rab-7L1 [Osmerus mordax]
Length = 206
Score = 174 bits (442), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 132/209 (63%), Gaps = 8/209 (3%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFS--PHYRATIGVDFALKVLSWDHETIIRLQL 512
+E +K+L++G+ GK+S +KRYV+ F+ Y+ T+GVDFA+KVL W +RL L
Sbjct: 4 QEHTHKVLIVGDKNVGKSSYVKRYVNGNFNYKQPYKMTVGVDFAVKVLQWSDTETVRLHL 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAGQE F +MTRVYYK A G ++FD+T ++F +WKQD+D K LP+G+PIPC+
Sbjct: 64 WDIAGQESFISMTRVYYKGASGCVVMFDMTEPSSFLHARQWKQDVDTKAMLPNGDPIPCI 123
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LLANKCD +++ KI EF + + F GW ETS KDN NI + + LV+ +L +
Sbjct: 124 LLANKCDLGMGCVSSE--KIKEFSEANGFIGWMETSVKDNRNIQEPLRFLVENMLRS--- 178
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNC 661
N + + V +L ++S ++ C
Sbjct: 179 -GNAVNPHPPQKVVNLQQDSAPARDTGCC 206
>gi|390355996|ref|XP_786497.2| PREDICTED: ras-related protein Rab-7L1-like [Strongylocentrotus
purpuratus]
Length = 278
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K++++G+ GKT+ + RYV F P ++ T+GVDFALK + + I+RLQLWD
Sbjct: 71 KEKLFKVIIVGDSLVGKTTFVHRYVSGKFDPGFKTTVGVDFALKKIERSKQDIVRLQLWD 130
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQER ++TRVYYK+A I+FDVT+ TF+ V+ WK D++ KV L +G+P+PC+LL
Sbjct: 131 IAGQERVSSLTRVYYKDASACVIMFDVTQRKTFNNVMNWKNDVEKKVALSNGSPVPCLLL 190
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
ANK D P + +I E +NF GW + S KDN NI+ + LV+++L
Sbjct: 191 ANKIDLPSPNV--KEEEIKELCNNNNFIGWNKISVKDNTNIEQSMNFLVEEML 241
>gi|156398287|ref|XP_001638120.1| predicted protein [Nematostella vectensis]
gi|156225238|gb|EDO46057.1| predicted protein [Nematostella vectensis]
Length = 195
Score = 173 bits (439), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 114/173 (65%), Gaps = 2/173 (1%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K+LV+G++ GK S +KRYV+ + P Y+ TIGVDFALK + W T IRLQ+W IAGQ
Sbjct: 9 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 68
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +MTRVYYK A ++FD+ R T D +KWK+DLD+K L P+PC+L+ NK
Sbjct: 69 ERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKS 128
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
D P + + ID+ KEH+F W E S K++IN+ + LV+ ++E+ K
Sbjct: 129 DLPDRPV--DKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLMEDGK 179
>gi|327269235|ref|XP_003219400.1| PREDICTED: ras-related protein Rab-38-like [Anolis carolinensis]
Length = 196
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 100/118 (84%), Gaps = 2/118 (1%)
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERFGNMTRVYY++A+GAFIVFDVTR ATF+AV KWK+DLD K+TLP+G P+P VLLANK
Sbjct: 53 QERFGNMTRVYYRDAMGAFIVFDVTRPATFEAVTKWKEDLDTKLTLPNGKPVPTVLLANK 112
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKVQ 633
CDQ KE + NN K+++F +E+ F GWFETSAK+NINID+A++ LV+ I+ E+D V+
Sbjct: 113 CDQSKEVLVNNGIKMEQFCQENGFVGWFETSAKENINIDEASRCLVKHIMATESDPVE 170
>gi|291402523|ref|XP_002717603.1| PREDICTED: RAB7, member RAS oncogene family-like 1 isoform 2
[Oryctolagus cuniculus]
Length = 180
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 116/180 (64%), Gaps = 26/180 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N K +A
Sbjct: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSKEEA 157
>gi|260822457|ref|XP_002606618.1| hypothetical protein BRAFLDRAFT_209603 [Branchiostoma floridae]
gi|229291962|gb|EEN62628.1| hypothetical protein BRAFLDRAFT_209603 [Branchiostoma floridae]
Length = 144
Score = 173 bits (438), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/133 (60%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Query: 483 FSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVT 542
FSP+Y+ TIGVDFALK L WD +T I LQLWDIAG ERFG+MTRVYYK A+ A IVFD++
Sbjct: 1 FSPNYKLTIGVDFALKSLDWDEQTKINLQLWDIAGHERFGHMTRVYYKYAIAAIIVFDLS 60
Query: 543 RAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFS 602
R TF++VLKW D++ KV L D PIP +LLANKCD + + ++EF K+H F
Sbjct: 61 RPTTFESVLKWYNDVNEKVMLADQQPIPVILLANKCDIDDSTF--DKSSLEEFCKQHKFI 118
Query: 603 GWFETSAKDNINI 615
GWFETSAK + NI
Sbjct: 119 GWFETSAKLDKNI 131
>gi|298709911|emb|CBJ31636.1| Rab32C, RAB family GTPase [Ectocarpus siliculosus]
Length = 243
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 132/206 (64%), Gaps = 13/206 (6%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE-------TIIRL 510
+ KILV+G+ G GKTS+I+R+V+ FSP +R TIGVDF +K ++ + + T +R+
Sbjct: 10 VIKILVVGDAGVGKTSVIQRFVNDEFSPTHRPTIGVDFFIKEVALNGDQSESFPGTTVRV 69
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQ+R M R Y+K A+GA +V+D++R TFD+ KWKQ+LDA +TLP+G+ +P
Sbjct: 70 QLWDIAGQDRARKMNRAYFKGALGALVVYDISRPQTFDSAAKWKQELDANITLPNGSSLP 129
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID--DAAKTLVQKILE 628
VLL NK D + + + ID F++ H F W + SAKD IN D + L+QK+L
Sbjct: 130 VVLLGNKVDLEVAKV--DVSYIDSFVETHRFVAWSDVSAKDAINGDFEMSVACLIQKLLC 187
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQE 654
++++ G S A FS ++E
Sbjct: 188 DEEL--FGPGMRRSAAAFSTRLQARE 211
>gi|291000955|ref|XP_002683044.1| rab family small GTPase [Naegleria gruberi]
gi|284096673|gb|EFC50300.1| rab family small GTPase [Naegleria gruberi]
Length = 243
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/183 (46%), Positives = 122/183 (66%), Gaps = 11/183 (6%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
K +++YKI+ +G+ GKT+ I++YV+ +FS Y++T+GVDF+ K +D T LQ
Sbjct: 10 KPKYMYKIIFVGDSTCGKTAFIQQYVNNYFSKTYKSTLGVDFSYKEYDYDENTCFNLQ-- 67
Query: 514 DIAGQERF-GNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP-------D 565
DIAGQERF MT V+Y++AV A I++DVT TFD WK D+D+KV LP D
Sbjct: 68 DIAGQERFIKAMTSVFYRDAVVAVIMYDVTNPVTFDHTKDWKIDIDSKVFLPPLNENDSD 127
Query: 566 GNPIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
PIPC+L+ NK D K E + P ++DE++K+H F+GW ETSAKD N+D A K +V+
Sbjct: 128 DIPIPCILVGNKIDLNKHEKLNFKPNELDEYVKKHGFAGWVETSAKDRTNMDKAVKMIVE 187
Query: 625 KIL 627
++L
Sbjct: 188 QVL 190
>gi|426239401|ref|XP_004013610.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Ovis aries]
Length = 179
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF KWKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 154
>gi|322795628|gb|EFZ18307.1| hypothetical protein SINV_02029 [Solenopsis invicta]
Length = 176
Score = 171 bits (434), Expect = 8e-40, Method: Composition-based stats.
Identities = 87/161 (54%), Positives = 108/161 (67%), Gaps = 14/161 (8%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E L+K LVIG+ G GK FS +Y+ TIG DFA+K L WD +T I LQLWD
Sbjct: 29 KEHLFKFLVIGDYGVGK-----------FSSNYKITIGADFAIKTLDWDPQTKINLQLWD 77
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG ERFG MTRVYYK AV A +VFD++RAATF ++ KW DL KV+LPDG+ IP VLL
Sbjct: 78 IAGHERFGYMTRVYYKYAVAAALVFDISRAATFQSMKKWLNDLREKVSLPDGSSIPVVLL 137
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINI 615
ANKCD +A +I +F KE+ W+ TSAK+N N+
Sbjct: 138 ANKCDI---SVAVTDEQISKFCKENKIYAWYATSAKNNTNV 175
>gi|403294872|ref|XP_003938386.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 179
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYCQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMSVLIEKMMRNSR 154
>gi|440800245|gb|ELR21284.1| Ras subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 275
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 122/177 (68%), Gaps = 3/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E+LYK+LV+G GKTS+I R V FS Y++TIGVDFALK L D I +QLWD
Sbjct: 63 KEYLYKVLVVGCAATGKTSLIHRTVEGHFSGQYKSTIGVDFALKSLERDQHKIF-VQLWD 121
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVT--RAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
IAGQERF ++TRVYY++AVGAF+V D T + ++ KWK D+D KV LP+G +P V
Sbjct: 122 IAGQERFSSLTRVYYRDAVGAFVVIDATADLKTSLESAKKWKDDVDDKVKLPNGEHLPVV 181
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
L+ANK D N ++IDEF K + F+GW TSAK+NIN+++A LV KIL+N
Sbjct: 182 LIANKSDLLGNIHNINESEIDEFAKANKFAGWLATSAKENINVEEAVGALVDKILQN 238
>gi|348578127|ref|XP_003474835.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Cavia
porcellus]
Length = 180
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 HDHLFKVLVVGDAAVGKTSLVRRYSQDCFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMSNSR 154
>gi|208609964|ref|NP_001129135.1| ras-related protein Rab-7L1 isoform 2 [Homo sapiens]
gi|194384084|dbj|BAG64815.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 113/175 (64%), Gaps = 26/175 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 152
>gi|338724627|ref|XP_003364981.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Equus
caballus]
Length = 179
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 114/177 (64%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 154
>gi|242012932|ref|XP_002427179.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212511462|gb|EEB14441.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 223
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E + KILV+G+ G GKT++I+RYV F+ +Y+ TIG DF++K + WD T + +QLWD
Sbjct: 23 KEIMLKILVVGDYGVGKTAVIRRYVEGKFTSNYKVTIGADFSIKTMPWDSTTEVNIQLWD 82
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAG E+ M+RVYYK A A IV D++R ATF ++ W +D+ KV L DG P+P ++L
Sbjct: 83 IAGNEKLTFMSRVYYKYAAAAVIVIDISRIATFHSLQNWLKDIRDKVILSDGLPVPIIIL 142
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
NKCD + + + +++ K++ WF+TSAK NINIDDA K ++
Sbjct: 143 VNKCDINEISVPLDA--LNKLSKQYGVLKWFKTSAKCNINIDDAMKFII 189
>gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736318|gb|AAX97488.1| small Rab GTPase RabX11 [Trichomonas vaginalis]
gi|121905849|gb|EAY10770.1| Ras family protein [Trichomonas vaginalis G3]
Length = 210
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+YKI+V+G++G GKTS+I+R+V FS Y+ TIGVDFA K+++ D +QLWDIAG
Sbjct: 13 VYKIIVVGDMGTGKTSMIRRFVEGNFSEFYKITIGVDFANKIITADG-VKCDIQLWDIAG 71
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERFG+MT VYY+E+VGA +VFD+TR +TF+ W D+ AKV G +P +L+ NK
Sbjct: 72 QERFGSMTGVYYRESVGAIVVFDITRPSTFEMTKIWMDDIQAKVQTSAGEAVPTLLIGNK 131
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
D E N ++ ++ +E+++ +FETSAKD N+++A + L I++N+
Sbjct: 132 IDLKPENWGNKTEEMQKYAEENHYLQYFETSAKDGTNLEEAIQALASYIVKNN 184
>gi|344277038|ref|XP_003410312.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Loxodonta
africana]
Length = 180
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 113/177 (63%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMNNSR 154
>gi|301786130|ref|XP_002928479.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 179
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 114/177 (64%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNAMTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 154
>gi|225709744|gb|ACO10718.1| Ras-related protein Rab-32 [Caligus rogercresseyi]
Length = 202
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 123/175 (70%), Gaps = 3/175 (1%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK++VIG++ GK++ I+RY F+ +Y AT+GVDF LK + +H IRLQLWDIAG
Sbjct: 17 LYKVIVIGDVNTGKSAFIRRYTDGSFAENYLATVGVDFHLKDIQLEHNVEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+ +VGAFI++D T ++F AV+KWK++LD K +LP+G IP +L+ANK
Sbjct: 77 QERFSRMTRAYFTGSVGAFIIYDSTDLSSFRAVVKWKKELDLKCSLPEGQNIPAILIANK 136
Query: 578 CD-QPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILEND 630
D +P G+ N ++ +F+KE+ F WF TSAK NI+++ +++ IL+ D
Sbjct: 137 NDLEPCAGLPNEE-EMSQFLKENGFIPIWFRTSAKTGENIEESIDLMLKLILKID 190
>gi|47197566|emb|CAF89371.1| unnamed protein product [Tetraodon nigroviridis]
Length = 94
Score = 169 bits (429), Expect = 4e-39, Method: Composition-based stats.
Identities = 77/95 (81%), Positives = 88/95 (92%), Gaps = 1/95 (1%)
Query: 472 TSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKE 531
TSIIKRYVH FSP+YRATIGVDFALKVL+WD ET+ RLQLWDIAGQERFGNMTRVYY+E
Sbjct: 1 TSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQETV-RLQLWDIAGQERFGNMTRVYYRE 59
Query: 532 AVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
A+GAFIVFDVTR A+F+AV KWK+DLD+K+TL +G
Sbjct: 60 AMGAFIVFDVTRPASFEAVTKWKEDLDSKLTLANG 94
>gi|290561803|gb|ADD38299.1| Ras-related protein Rab-32 [Lepeophtheirus salmonis]
Length = 308
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 118/174 (67%), Gaps = 1/174 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYKI+VIGE+ +GK++ I+R++ F +Y AT+GVDF LKVL + + +RLQLWDIAG
Sbjct: 17 LYKIIVIGEVNSGKSAFIRRFIDDSFCENYYATVGVDFHLKVLQFKKDLEVRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA +++D TF++V KWK++LD K LP+G +P +LL+NK
Sbjct: 77 QERFSKMTRAYFKGSVGAIVLYDSGNVNTFNSVKKWKEELDEKCALPEGQNVPAILLSNK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILEND 630
D PK + +I +F++ + F WF+TSAK NI + L++ IL+ D
Sbjct: 137 SDMPKHPNLPSDEEISKFVETNGFVPKWFKTSAKTGENIQECINFLIKVILKVD 190
>gi|345797971|ref|XP_003434383.1| PREDICTED: ras-related protein Rab-7L1 [Canis lupus familiaris]
Length = 179
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY F HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 154
>gi|410986337|ref|XP_003999467.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Felis catus]
Length = 179
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY F+ HY++T+G
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFNKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFTNSQRWKQDLDSKLTLPNGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCD ++ + ++D F KE+ F+GW ETS K+N NI++A + L++K++ N +
Sbjct: 100 ANKCDLSPWAVSRD--QVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSR 154
>gi|432091914|gb|ELK24760.1| Ras-related protein Rab-32 [Myotis davidii]
Length = 135
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 94/115 (81%), Gaps = 1/115 (0%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP G PI VLLANKCDQ KE
Sbjct: 1 MTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPSGGPIAAVLLANKCDQKKE 60
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
G + PA++D+F KEH F+GWFETSAKDNINI++AA+ LV+ IL N + N D+
Sbjct: 61 G-SQIPAQMDQFCKEHGFTGWFETSAKDNINIEEAARFLVENILMNQQSFPNEDN 114
>gi|345318875|ref|XP_001520779.2| PREDICTED: ras-related protein Rab-7L1-like, partial
[Ornithorhynchus anatinus]
Length = 186
Score = 166 bits (420), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/145 (54%), Positives = 105/145 (72%), Gaps = 2/145 (1%)
Query: 487 YRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAAT 546
Y + VDFALKVL W ++RLQLWDIAGQERF +MTR+YY+EA I+FDVT A T
Sbjct: 18 YEYLLIVDFALKVLQWSDSEMVRLQLWDIAGQERFTSMTRLYYREASACVIMFDVTNATT 77
Query: 547 FDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFE 606
F +WKQDLD+K+TLP+G P+PC+LLANKCD + + +ID F KE+ F+GW E
Sbjct: 78 FSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLTPWAVTRD--QIDRFSKENGFTGWTE 135
Query: 607 TSAKDNINIDDAAKTLVQKILENDK 631
TS K+N NI++A + LV+K++ N +
Sbjct: 136 TSVKENKNINEAMRVLVEKMMMNSE 160
>gi|334322278|ref|XP_003340214.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Monodelphis
domestica]
Length = 180
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R++L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDYLFKVLVVGDAAVGKTSLVQRYCQDSFSRHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF KWKQDLD K+TLP G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDASACVIMFDVTNATTFSNCQKWKQDLDCKLTLPSGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D + + +ID F KE+ F+GW ETS K+N N+++A + L+++++ N +
Sbjct: 100 ANKSDLSPWAMTRD--QIDRFSKENGFTGWTETSVKENKNVNEAMRVLIEQMMANTR 154
>gi|395531198|ref|XP_003767669.1| PREDICTED: ras-related protein Rab-7L1 isoform 2 [Sarcophilus
harrisii]
Length = 180
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 111/177 (62%), Gaps = 26/177 (14%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R++L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 4 RDYLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG---------------------- 41
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD K+TLP G P+PC+LL
Sbjct: 42 --GQERFTSMTRLYYRDAAACVIMFDVTNATTFSNSQRWKQDLDCKLTLPSGEPVPCLLL 99
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D + + +ID F KE+ F+GW ETS K+N NI++A + L+++++ N +
Sbjct: 100 ANKSDLSPWAVTRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEQMMANTR 154
>gi|149058657|gb|EDM09814.1| RAB7, member RAS oncogene family-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 164 bits (416), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/129 (57%), Positives = 99/129 (76%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKE 583
ANK + K+
Sbjct: 124 ANKSPRGKD 132
>gi|327278639|ref|XP_003224068.1| PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Anolis
carolinensis]
Length = 178
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 110/170 (64%), Gaps = 26/170 (15%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
++K+L+IG+ GKTS+++RY + F+ HY++T+G G
Sbjct: 1 MFKVLIIGDATVGKTSLVQRYANDSFNKHYKSTVG------------------------G 36
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF +MTR+YYKEA I+FDVT +TF + KWKQDLD+K+ LPDGNP+PC+LLANK
Sbjct: 37 QERFTSMTRLYYKEASACVIMFDVTSVSTFTSCQKWKQDLDSKLRLPDGNPVPCLLLANK 96
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
CD + +ID F KE+ F+GW ETS K+N NI+++ + L++K++
Sbjct: 97 CDLYPWSVTRE--EIDRFSKENGFTGWTETSVKENKNINESMRVLIEKMM 144
>gi|326427102|gb|EGD72672.1| hypothetical protein PTSG_04403 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 2/168 (1%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK++VIG+ GKTSII RY F Y+ T+GVDFALK++ + + LQLWDIAGQ
Sbjct: 11 YKVIVIGDGAVGKTSIISRYALGTFDEGYKKTLGVDFALKLVERKGKQDVYLQLWDIAGQ 70
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
++F ++TRVY++ A VFD+T TF+ V KW +++AKV + P+P +LLANKC
Sbjct: 71 DQFSSLTRVYFRHASACVTVFDLTARQTFENVKKWMDEVEAKVNTSETGPVPAILLANKC 130
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
D +++ A+I+E + +NF WF+TSAKDN NID A TLV I
Sbjct: 131 DLKPHEVSD--AEIEEMKERYNFVAWFKTSAKDNTNIDKAMATLVDHI 176
>gi|325190253|emb|CCA24730.1| Rab32 family GTPase putative [Albugo laibachii Nc14]
Length = 215
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 122/175 (69%), Gaps = 4/175 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+G+ GK+SII+RYV+ F H++ TIGVDF+LK + + T +R+QLWDIAG
Sbjct: 14 VIKVLVLGDAATGKSSIIRRYVYGSFVEHHQTTIGVDFSLKAAT-VNGTTVRVQLWDIAG 72
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QE F ++RVYYK+A+ A +V+D++ TF++VLKWK++++ KV LP+ P+P VL NK
Sbjct: 73 QEHFRALSRVYYKDALAALLVYDISSPETFESVLKWKKEIETKVELPNHKPLPVVLCGNK 132
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
D + + + + F + + F+ WF+TSAK+N NID A + L++ +L++ +
Sbjct: 133 SDLTE---SVDRDFLTSFSESNGFTAWFDTSAKENTNIDAALQALIEGVLKHQDI 184
>gi|123496328|ref|XP_001326942.1| Ras family protein [Trichomonas vaginalis G3]
gi|121909864|gb|EAY14719.1| Ras family protein [Trichomonas vaginalis G3]
Length = 218
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++ + KI+V+GE+G GKTS+I++YVH FS Y++TIGVDFA K + ++ LQL
Sbjct: 10 DSKKRVMKIIVVGEMGTGKTSLIRQYVHGAFSEFYKSTIGVDFAHKKIDLPTGDVVDLQL 69
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDI+GQERF ++T +YY EAV A +VFD+ +T WK+D+D KV + PIPC+
Sbjct: 70 WDISGQERFASVTHMYYNEAVAAMVVFDLISPSTLCVAKIWKKDIDEKVMTSEEKPIPCL 129
Query: 573 LLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
L+ NK D KEG + ++D+F +E+ F G+ TSA+ + N+ ++ + ++ +LE++
Sbjct: 130 LVGNKVDLVGKEGPDKSDEEMDKFCEENGFMGFIRTSARQDTNVTESVEKILHYVLEHN 188
>gi|323448668|gb|EGB04563.1| hypothetical protein AURANDRAFT_32238 [Aureococcus anophagefferens]
Length = 241
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 111/168 (66%), Gaps = 4/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KILV+G+ GKT++I++ V F+ Y++T GVDFALK + D +T+ RLQLWD+AG E
Sbjct: 44 KILVLGDKAVGKTALIRQLVRDEFTSRYKSTTGVDFALKEIDVDGQTV-RLQLWDVAGAE 102
Query: 520 R-FGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
G++ +VYY++ G +V+DVTR TFD V WK+++D KV L + P+P VLL NKC
Sbjct: 103 TTLGSIAKVYYRDTFGVLLVYDVTRPTTFDTVTAWKREIDDKVALSNDEPVPVVLLGNKC 162
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
D E + A++D F + F WF+ SAK NI +AA+ LVQKI
Sbjct: 163 D--IETATADTAELDRFCGQWGFVAWFDVSAKTGFNIAEAARCLVQKI 208
>gi|66819641|ref|XP_643480.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|75017350|sp|Q8MXQ2.2|RB32C_DICDI RecName: Full=Ras-related protein Rab-32C
gi|60471632|gb|EAL69588.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 9/176 (5%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KILV+G+L GKTSII+RY H F P Y+ TIGVDF KVL + ++ LQLWDIAGQE
Sbjct: 30 KILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVL-LQLWDIAGQE 88
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RFG+MTRVY++ A GA IVFD TR+ TF WK D+D + +P +LLANKCD
Sbjct: 89 RFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCF---NNENLPTILLANKCD 145
Query: 580 --QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
P P I+ F +++ F+ +F TSAK++ I++A + LV+ ILE+ + Q
Sbjct: 146 LLTPPYTF---PEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILESYQTQ 198
>gi|321455624|gb|EFX66752.1| hypothetical protein DAPPUDRAFT_64407 [Daphnia pulex]
Length = 189
Score = 162 bits (411), Expect = 5e-37, Method: Composition-based stats.
Identities = 82/184 (44%), Positives = 117/184 (63%), Gaps = 6/184 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
KR++ YK+LVIG+ GKTSII RYVH F Y T+G K ++W++ + L+ +
Sbjct: 7 KRKY-YKLLVIGDQNTGKTSIIHRYVHGSFRDKYEVTVGAGINFKEIAWNNTDHLTLEFF 65
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
DI G+ER MT +Y++AVGAF+V DVT+ F A WK+DLD K+ + D +PCVL
Sbjct: 66 DIGGEERSRFMTSAFYRKAVGAFVVTDVTQPNGFQAATLWKKDLDMKLRMHDDTLLPCVL 125
Query: 574 LANKC-----DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
L NKC DQ +P+++D F + FSGWF+TSAK++INID+A + LV K++
Sbjct: 126 LINKCDGATADQKHSSNELDPSQVDRFCRHQKFSGWFDTSAKNDINIDEAVQFLVGKVIR 185
Query: 629 NDKV 632
+ V
Sbjct: 186 RNLV 189
>gi|345324480|ref|XP_001512089.2| PREDICTED: ras-related protein Rab-38-like [Ornithorhynchus
anatinus]
Length = 137
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 89/107 (83%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTRVYY+EA+GAFIVFDVTR ATFDAV KWK DLD+K+TLP G P+ VLLANKCDQ ++
Sbjct: 1 MTRVYYREALGAFIVFDVTRPATFDAVTKWKSDLDSKLTLPSGKPVSAVLLANKCDQGRD 60
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+ NN K+D+F KE+ F GWFETSAK+NINID+A++ LV+ I+ N+
Sbjct: 61 VLVNNGLKMDQFCKENGFVGWFETSAKENINIDEASRCLVKHIIANE 107
>gi|299472101|emb|CBN77086.1| Rab32B, RAB family GTPase [Ectocarpus siliculosus]
Length = 570
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 113/172 (65%), Gaps = 5/172 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+LV+G GK+SII R+V FS Y +T+G D+A+K +S ++ +RLQLWDIAGQ+
Sbjct: 353 KVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSLENGRQVRLQLWDIAGQD 412
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +TR Y++ A GA +V DVTR TFDA+++WK+++D +G +P L ANKCD
Sbjct: 413 RFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWKEEIDLWCQ-NEGCDLPVYLFANKCD 471
Query: 580 QPKEGIANN---PAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
KE + ++ A++++ ++ F+GW TSAK NID A +LV+ LE
Sbjct: 472 LLKE-VQDSFLAGARMEKTCRDAGFAGWHITSAKRGDNIDTAMTSLVEHALE 522
>gi|225718126|gb|ACO14909.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 115/178 (64%), Gaps = 1/178 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LVIG++ AGK++ I+RY FS Y AT+GVDF LKVL IRLQLWDIAG
Sbjct: 17 LYKVLVIGDVNAGKSAYIRRYTGGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA I++D T +F AV KWK++LDA +LP+G IP +L++ K
Sbjct: 77 QERFSKMTRAYFKGSVGALIMYDSTNLGSFRAVQKWKKELDATCSLPEGQNIPAMLISTK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
D P +++ +F++E+ F WF+TS+K + ++ +++ IL D A
Sbjct: 137 NDLPPCENIPQGSEMSDFLEENGFIPRWFQTSSKTGEYVQESIDFMIKLILRIDSWSA 194
>gi|225717948|gb|ACO14820.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LVIG++ AGK++ I+RY FS Y AT+GVDF LKVL IRLQLWDIAG
Sbjct: 17 LYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA I++D T +F AV KWK++LDA +LP+G IP +L++ K
Sbjct: 77 QERFSKMTRAYFKGSVGALIMYDSTNLGSFRAVQKWKKELDATCSLPEGQNIPAMLISTK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
D P +++ +F++E+ F WF+TS+K + ++ +++ L D A
Sbjct: 137 NDLPPCENIPQGSEMSDFLEENGFIPRWFQTSSKTGEYVQESIDFMIKLFLRIDSWSA 194
>gi|167536519|ref|XP_001749931.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771646|gb|EDQ85310.1| predicted protein [Monosiga brevicollis MX1]
Length = 305
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 470 GKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYY 529
GKTS+IKRYV F Y+ +IGVDF+LK L+ D + I LQLWDIAG ER+ +MT YY
Sbjct: 113 GKTSLIKRYVDGSFDSEYKLSIGVDFSLKNLTIDDQPI-ALQLWDIAGHERYRSMTSTYY 171
Query: 530 KEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNP 589
+ A+ A +VFD++R ATFD+++KW DL+ KV L +G+ +P +L+ANK D I +
Sbjct: 172 RYAMAAVLVFDLSRPATFDSIVKWHTDLNDKVMLANGDRVPAILIANKADSILGPI--DE 229
Query: 590 AKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
A +DE+ +H F GWF TSAK NI +A +TL ++++
Sbjct: 230 AMLDEYCSKHGFLGWFATSAKTGQNIGEAFETLAREVIR 268
>gi|225719646|gb|ACO15669.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 314
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LVI ++ AGK++ I+RY FS Y AT+GVDF LKVL IRLQLWDIAG
Sbjct: 17 LYKVLVIRDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA I++D T +F AV KWK++LDA +LP+G IP +L++ K
Sbjct: 77 QERFSKMTRAYFKGSVGALIMYDSTNLGSFRAVQKWKKELDATCSLPEGQNIPAMLISTK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFS-GWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
D P +++ +F++E+ F WF+TS+K + ++ +++ IL D A
Sbjct: 137 NDLPPCENIPQGSEMSDFLEENGFIPRWFQTSSKTGEYVQESIDFMIKLILRIDSWSA 194
>gi|330791055|ref|XP_003283610.1| Rab GTPase [Dictyostelium purpureum]
gi|325086470|gb|EGC39859.1| Rab GTPase [Dictyostelium purpureum]
Length = 208
Score = 157 bits (397), Expect = 2e-35, Method: Composition-based stats.
Identities = 94/203 (46%), Positives = 122/203 (60%), Gaps = 16/203 (7%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
K D KILV+G+L GKTSII+RY H F P Y+ TIGVDF K+L + ++
Sbjct: 5 KNSDDEAISLKILVVGKLACGKTSIIQRYCHNHFQPKYKPTIGVDFQQKLLEIMGQKVL- 63
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
LQLWDIAGQERFG+MTRVY++ A GA +VFD TR+ TF WK D+D D +
Sbjct: 64 LQLWDIAGQERFGHMTRVYFQNAHGAVVVFDSTRSGTFLGAKAWKDDIDYCFNKED---L 120
Query: 570 PCVLLANKCD---QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
P +LLANKCD QP P ID F + + F +F TSAK++ I++A + LV+ I
Sbjct: 121 PTILLANKCDLLTQP----YTFPEDIDAFCQTNRFHKYFYTSAKEDTGINEAIEELVKVI 176
Query: 627 LENDKVQANG-----DSHATSEA 644
LE+ + Q D AT+EA
Sbjct: 177 LESYQTQEQTTGFKLDEPATTEA 199
>gi|47028277|gb|AAT09071.1| RAS related GTP binding protein [Bigelowiella natans]
Length = 210
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L K+LV+G++ GKTSII+RY + F Y+ TIGV+FALK + D + + +QLWDI
Sbjct: 4 DLLLKVLVVGDVAVGKTSIIQRYTNDSFRKDYKTTIGVEFALKPIEVDDKCV-NIQLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQ+RF + R +Y+ A A +V+D+T T +KWK D+D KV LPDG IPC+LL
Sbjct: 63 AGQDRFIGLLRNFYRNASAAIVVYDITSPKTLQNAVKWKADIDKKVRLPDGGIIPCILLG 122
Query: 576 NKCD-QPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D + EG +P E K+ F G ETSAK N+ A K LV+K++
Sbjct: 123 NKSDLRETEGTTFIDPEYAMELAKKSGFIGCMETSAKTGANVGRACKGLVKKVI 176
>gi|225718210|gb|ACO14951.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 194
Score = 155 bits (392), Expect = 6e-35, Method: Composition-based stats.
Identities = 80/174 (45%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LVIG++ AGK++ I+RY FS Y AT+GVDF LKVL IRLQLWDIAG
Sbjct: 17 LYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA I++D T +F AV KWK++LDA +LP+G IP +L++ K
Sbjct: 77 QERFSKMTRAYFKGSVGALIMYDSTNLGSFRAVQKWKKELDATCSLPEGQNIPAMLISTK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNF-SGWFETSAKDNINIDDAAKTLVQKILEND 630
D P +++ +F++E+ F WF+TS+K + ++ +++ IL D
Sbjct: 137 NDLPPCENIPQGSEMSDFLEENGFIPRWFQTSSKTGEYVQESIDFMIKLILRID 190
>gi|281210797|gb|EFA84963.1| hypothetical protein PPL_01956 [Polysphondylium pallidum PN500]
Length = 795
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 111/170 (65%), Gaps = 7/170 (4%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KILV+G+L GKTSII+R+ H F Y+ TIGVDF K + + +I LQLWDIAGQE
Sbjct: 16 KILVVGKLACGKTSIIQRFCHDEFQSKYKPTIGVDFHTKEMEVMNIKVI-LQLWDIAGQE 74
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RFG+MTRVY++ A GA +VFD TR ATF +WK D+D + + +P VLLANK D
Sbjct: 75 RFGHMTRVYFQNADGALVVFDATRVATFHGAKEWKDDIDDCFS---KDALPTVLLANKSD 131
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
P+ I P I+EF +++ F F+TSAKD I +A LV KIL+N
Sbjct: 132 LPQTTI---PDDIEEFCEQNGFLNCFKTSAKDGTGITEALTDLVTKILKN 178
>gi|281205259|gb|EFA79452.1| hypothetical protein PPL_07870 [Polysphondylium pallidum PN500]
Length = 262
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KILVIGE GKTSII +Y F P Y+ T+G+DF K ++ D + I L LWD+AGQE
Sbjct: 46 KILVIGEAACGKTSIIHKYCLNKFEPKYKVTMGLDFFPKKITVDDQPI-NLALWDVAGQE 104
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAA-TFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
RF +M R Y+K A GA IVFD+TR T ++ KWK LD + PD NPIPC+LLANK
Sbjct: 105 RFHHMIRSYFKNANGAIIVFDLTRIYHTLNSASKWKLQLD--ICFPDDNPIPCILLANKS 162
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDS 638
D ++DEFI E+ WF TSAK+ I+ A + + + IL+ Q+N S
Sbjct: 163 DLFDMNDVEIKKQLDEFIAENGIKQWFFTSAKEGFGIEHAMEYIARVILDTTSAQSNTMS 222
Query: 639 HATS 642
A++
Sbjct: 223 TASN 226
>gi|340373077|ref|XP_003385069.1| PREDICTED: ras-related protein Rab-32B-like isoform 2 [Amphimedon
queenslandica]
Length = 117
Score = 150 bits (379), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/105 (63%), Positives = 79/105 (75%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
+ K + +E LYK+LV+G G GKTS+I+RY FSPHY+ TIGVDFALK L WD T
Sbjct: 8 FCKTSEIKEILYKVLVVGNFGVGKTSVIRRYTSGIFSPHYKLTIGVDFALKTLIWDEHTK 67
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK 552
I +QLWDIAG ERFG+MTRVYYK A+ A IVFD+TR TFDAV K
Sbjct: 68 INMQLWDIAGHERFGHMTRVYYKYAIAAIIVFDLTRQPTFDAVQK 112
>gi|225719728|gb|ACO15710.1| Ras-related protein Rab-38 [Caligus clemensi]
Length = 164
Score = 146 bits (368), Expect = 4e-32, Method: Composition-based stats.
Identities = 72/144 (50%), Positives = 98/144 (68%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
LYK+LVIG++ AGK++ I+RY FS Y AT+GVDF LKVL IRLQLWDIAG
Sbjct: 17 LYKVLVIGDVNAGKSAYIRRYTEGNFSEDYLATVGVDFHLKVLHLLRGLEIRLQLWDIAG 76
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF MTR Y+K +VGA I++D T +F AV KWK++LDA +LP+G IP +L++ K
Sbjct: 77 QERFSKMTRAYFKGSVGALIMYDSTNLGSFRAVQKWKKELDAICSLPEGQNIPAMLISTK 136
Query: 578 CDQPKEGIANNPAKIDEFIKEHNF 601
D P +++ +F++E+ F
Sbjct: 137 NDLPSCENIPQGSEMSDFLEENGF 160
>gi|239792594|dbj|BAH72623.1| ACYPI002292 [Acyrthosiphon pisum]
Length = 113
Score = 145 bits (367), Expect = 5e-32, Method: Composition-based stats.
Identities = 65/78 (83%), Positives = 71/78 (91%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KILVI ELG GKTSIIKRYVH+FFS HYRATIGVDFALK L WD T+IRLQLWDI
Sbjct: 36 EYLFKILVISELGTGKTSIIKRYVHKFFSQHYRATIGVDFALKSLEWDSNTVIRLQLWDI 95
Query: 516 AGQERFGNMTRVYYKEAV 533
AGQERFGNMTRVYYK+A+
Sbjct: 96 AGQERFGNMTRVYYKDAL 113
>gi|300120922|emb|CBK21164.2| unnamed protein product [Blastocystis hominis]
Length = 210
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 112/182 (61%), Gaps = 3/182 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M E + K++VIG+ GKTSIIK+Y++ FS + AT VDF+ KVL+ ++ R+
Sbjct: 1 MSSGDEKVVKVIVIGDAATGKTSIIKQYIYSTFSEQHVATATVDFSCKVLT-KNDVTYRV 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQER+ ++RVYY+ A+G FIV D A + + V KWK L+ V LP+ P+P
Sbjct: 60 QLWDIAGQERYQRISRVYYRNALGCFIVCDNVNAKSLENVEKWKNQLNENVKLPNDKPLP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+LL NK D + G++++ +I E ++ + W SAK +NI D+ L+ I+ D
Sbjct: 120 VILLVNKSDLTENGLSDD--QIKEVCEKCGIAQWIRVSAKTAMNISDSVDKLLDSIVIYD 177
Query: 631 KV 632
+
Sbjct: 178 DI 179
>gi|355714896|gb|AES05153.1| RAB32, member RAS oncoprotein family [Mustela putorius furo]
Length = 86
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERFGNMTRVYYKEAVGAF+VFD++R +TF+AVLKWK DLD+KV LP+G+PIP VLLAN
Sbjct: 1 GQERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 60
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFSG 603
KCDQ K+G NP ++D+F KEH F+G
Sbjct: 61 KCDQKKDG-GQNPPQMDQFCKEHGFTG 86
>gi|340369097|ref|XP_003383085.1| PREDICTED: ras-related protein Rab-7L1-like [Amphimedon
queenslandica]
Length = 206
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 118/195 (60%), Gaps = 9/195 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E ++K+L+IG+ GKT+ + YV + P+ + T+G D+A+K + W IRL LWDI
Sbjct: 3 ESVFKVLLIGDHSVGKTTFVASYVLNKWVPNLKTTVGADYAVKSVKWSETETIRLHLWDI 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF ++ R Y++ A G ++FDVT +F++ +WKQ+LD+KV LP+G +PCVLL
Sbjct: 63 AGQERFHSIARTYFRGASGCVVMFDVTNNKSFESAREWKQELDSKVELPNGEKVPCVLLG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D + + +++D+F +E+ F + S K+ I + L++ +LE +
Sbjct: 123 NKDDLVDKKVVTQ-SQVDKFARENGFIHYSFCSVKEGKGITEPMSELIKCMLEQE----- 176
Query: 636 GDSHATSEAVFSLNR 650
H++ E + + +R
Sbjct: 177 ---HSSGEVLQAFDR 188
>gi|241701252|ref|XP_002411915.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
gi|215504864|gb|EEC14358.1| GTP-binding protein RAB-32, putative [Ixodes scapularis]
Length = 178
Score = 144 bits (363), Expect = 1e-31, Method: Composition-based stats.
Identities = 84/168 (50%), Positives = 105/168 (62%), Gaps = 13/168 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + L+K+LV+GE G GK +I+R V F+ Y+ TIGVDF+LK + +D++ I LQL
Sbjct: 21 DVEDLLFKVLVVGEFGVGK--LIER-VCDSFARAYKITIGVDFSLKHIVYDNKKHITLQL 77
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVL---KWKQDLDAKVTLPDGNPI 569
WDIAG ERFG MTRVYYK A VT F L +WK DL KV +G+PI
Sbjct: 78 WDIAGHERFGCMTRVYYKYAQHL-----VTGCFWFPRSLHLAQWKADLTEKVEQQNGHPI 132
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD 617
P VL+ANKCD EG N + F +EH F GWF TSAK+NINI +
Sbjct: 133 PVVLVANKCDL--EGSTINARFLTNFCQEHGFVGWFFTSAKENINISE 178
>gi|340373075|ref|XP_003385068.1| PREDICTED: ras-related protein Rab-32B-like isoform 1 [Amphimedon
queenslandica]
Length = 174
Score = 144 bits (362), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/124 (53%), Positives = 88/124 (70%)
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+QLWDIAG ERFG+MTRVYYK A+ A IVFD+TR TFDAV KW D+ KV L + P+
Sbjct: 1 MQLWDIAGHERFGHMTRVYYKYAIAAIIVFDLTRQPTFDAVQKWLDDVRQKVVLENDEPV 60
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
P +LLANKCD + +K+D++ ++HN GWF TSAKDN NI++A L++KI++
Sbjct: 61 PVLLLANKCDLDNTTAQVDQSKLDQYCEDHNLIGWFPTSAKDNTNIEEAMSFLIEKIMQI 120
Query: 630 DKVQ 633
+Q
Sbjct: 121 SSIQ 124
>gi|440294326|gb|ELP87343.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI+VIGE GKTS IK+Y H F YRATIGVDFA+K D + + L+LWDIAGQE
Sbjct: 11 KIIVIGEPSVGKTSTIKKYCHGVFDQLYRATIGVDFAVKFEKVDDKEV-ELRLWDIAGQE 69
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
++ MTRVYY A GA I++DVT TF A KWK+DL++KV D PIP +L+ NK D
Sbjct: 70 KYIAMTRVYYNGAHGAIIMYDVTAPNTFGATDKWKEDLESKVKFND-QPIPALLVGNKAD 128
Query: 580 -QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
+E + ++ ++E ++ TSAK + ++DA K + I E K +N
Sbjct: 129 LLSEEEMKTAEKEMRAKVEEQKYADGILTSAKSGLAVEDAMKKITHLIFERFKELSN 185
>gi|383848183|ref|XP_003699731.1| PREDICTED: ras-related protein Rab-32B-like [Megachile rotundata]
Length = 220
Score = 141 bits (356), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 17/182 (9%)
Query: 455 REFLYKILVIGELGAGKTSIIKRY-----VHQ---FFSPHYRATIGVDFALKVLSWDHET 506
+E L+K LVIG+ G GKT++++RY +H+ F Y+ V + + +++
Sbjct: 20 KEHLFKFLVIGDYGVGKTALVRRYTEGNGIHKRIVFRKYVYQGYNKVSYFAGKFTSNYKI 79
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
I G ERFG MTRVYYK AV A +VFD++R ATF ++ KW DL KVTLPDG
Sbjct: 80 TI-------GGHERFGYMTRVYYKYAVAAALVFDISRIATFQSIKKWLFDLREKVTLPDG 132
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ IP VLLANKCD P + +I F KE+N W+ TSAK+N N+D A + LV+ +
Sbjct: 133 SNIPVVLLANKCDIPYPVVPTE--QIARFCKENNIGAWYITSAKENTNVDVAMRYLVENV 190
Query: 627 LE 628
L+
Sbjct: 191 LK 192
>gi|403373426|gb|EJY86632.1| Rab GTPase 7 [Oxytricha trifallax]
Length = 234
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 14/211 (6%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ KILVIG +GKTSI+ R+V F +Y+AT+ DFA+K+L + +T IRLQLWD+ G
Sbjct: 1 MIKILVIGNSYSGKTSIVNRFVQNKFDTNYKATVACDFAMKILKIE-DTEIRLQLWDLVG 59
Query: 518 QE-RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
Q+ R G + +++ + A GA +V D+T + ++ + WK+ +D L +G PIP +L+ N
Sbjct: 60 QDSRIGGINKLFCRGASGALVVADITSRESLESTISWKEQVDTHAALKNGQPIPMILVVN 119
Query: 577 KCDQPKEGIANNPAKID---------EFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI- 626
K D E I +++ EF +EH+F G TSAK +NI++A LV++I
Sbjct: 120 KYDMI-EDIEQRGQELEEHMTEEFLQEFAQEHDFIGVLRTSAKTGLNINNAFSQLVRQIF 178
Query: 627 -LENDKVQANGDSHATSEAVFSLNRNSQETK 656
+E +G NRN Q+TK
Sbjct: 179 VMEFSSTYNDGGDQGIYGDDRGSNRNGQDTK 209
>gi|301108157|ref|XP_002903160.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097532|gb|EEY55584.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
Length = 220
Score = 137 bits (345), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+L++G GKTS I+R+ F+ Y +TIG DF K++++D + I LQLWDIAGQ+
Sbjct: 2 KVLIVGNARCGKTSTIRRFTQDDFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQD 61
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT-LPDGNPIPCVLLANKC 578
RF TR Y++EA GA IV D+TRA T DAV+ WK ++D L +G IP V++ANK
Sbjct: 62 RFAKFTRGYFREARGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKS 121
Query: 579 DQPKE--GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
D + G + + + + ++N WF SAK I DA + L+ +++ +
Sbjct: 122 DLLLDPMGALDLGVNMQKCVDKNNIVEWFRASAKSGERIGDAFQCLINRMVND 174
>gi|301108333|ref|XP_002903248.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
gi|262097620|gb|EEY55672.1| Rab32/38 family GTPase, putative [Phytophthora infestans T30-4]
Length = 220
Score = 137 bits (345), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/173 (40%), Positives = 105/173 (60%), Gaps = 3/173 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+L++G GKTS I+R+ F+ Y +TIG DF K++++D + I LQLWDIAGQ+
Sbjct: 2 KVLIVGNARCGKTSTIRRFTQDKFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQD 61
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT-LPDGNPIPCVLLANKC 578
RF TR Y++EA GA IV D+TRA T DAV+ WK ++D L +G IP V++ANK
Sbjct: 62 RFAKFTRGYFREARGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKS 121
Query: 579 DQPKE--GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
D + G + + + + ++N WF SAK I DA + L+ +++ +
Sbjct: 122 DLLLDPMGALDLGVNMQKCVDKNNIVEWFRASAKSGERIGDAFQCLINRMVND 174
>gi|348673878|gb|EGZ13697.1| hypothetical protein PHYSODRAFT_513477 [Phytophthora sojae]
Length = 227
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+L++G GKTS I+R+ F+ Y +TIG DF K++ +D I LQLWDIAGQ+
Sbjct: 2 KVLIVGNARCGKTSTIRRFTQDEFNEEYVSTIGADFVEKIIEYDEHLTISLQLWDIAGQD 61
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKV-TLPDGNPIPCVLLANKC 578
RF TR Y++EA GA IV D+TRA T DAV+ WK ++D L +G IP V++ANK
Sbjct: 62 RFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWKNEIDTCCKDLNEGAEIPVVMVANKS 121
Query: 579 DQPKE--GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
D + G + + + + ++ WF SAK +I DA + L+ +++
Sbjct: 122 DLLMDPMGALDLGVNMQKCVDKNKIVEWFRASAKSGEHIGDAFQCLIDRMV 172
>gi|440298549|gb|ELP91180.1| rab17, putative [Entamoeba invadens IP1]
Length = 205
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 87/117 (74%), Gaps = 2/117 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI+VIGE AGK ++I+RY H F P YRATIGVDFA+K ++ + + +L++WD+AGQE
Sbjct: 10 KIIVIGEPDAGKINVIRRYCHGVFEPTYRATIGVDFAVKFVTIGGKEL-QLRMWDVAGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
++ MTRVYYK+A GA I+++ T + +A KWK+DLD KV+L +G PIP +L+ N
Sbjct: 69 KYIGMTRVYYKDAQGAVILYNTTSEYSLEATNKWKEDLDTKVSL-NGEPIPAILVGN 124
>gi|47213472|emb|CAF91129.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 132 bits (333), Expect = 4e-28, Method: Composition-based stats.
Identities = 74/131 (56%), Positives = 89/131 (67%), Gaps = 10/131 (7%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
+P S M +R L K+LVIG+LG GKTSII RYVHQ FS HYRATIGVDFAL+VL WDH+
Sbjct: 14 APVSAMQQER--LLKVLVIGDLGVGKTSIITRYVHQVFSQHYRATIGVDFALRVLDWDHK 71
Query: 506 TIIRLQLWDIAGQ-----ERFGNM---TRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL 557
T++RLQLWDIAG ++ G + G +FD+TR +TF AVLKWK DL
Sbjct: 72 TVVRLQLWDIAGAVTQTLDQSGTLRPHDPGLLPRGRGRPGLFDMTRMSTFQAVLKWKGDL 131
Query: 558 DAKVTLPDGNP 568
D+KV DG P
Sbjct: 132 DSKVNGLDGRP 142
>gi|307949537|gb|ADN96604.1| Rab GTPase 7 [Euplotes octocarinatus]
Length = 217
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 10/178 (5%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ KIL+IG++ GKTSI+ ++V + F Y AT+ +FALK++ + + IRL LWDIAG
Sbjct: 1 MLKILIIGDVACGKTSILNQFVLKKFESTYSATVACEFALKIIKIE-DISIRLHLWDIAG 59
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
Q+R G +++++ ++A GA +V D+ + T + + WK+ +DA + +G IP VL NK
Sbjct: 60 QDRLGGISKLFCRDAAGALVVTDIKDSKTLENAITWKEQVDAHLE-SEGESIPMVLAVNK 118
Query: 578 CD----QPKEGIA----NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
D Q KEG A A +D+F ++ F G F TSAK N+ +A LV+++L
Sbjct: 119 YDLIEQQEKEGKAIEETMTQAFLDDFCSKNGFVGCFRTSAKTGGNVTNAFSLLVRQVL 176
>gi|167388366|ref|XP_001738539.1| rab17 [Entamoeba dispar SAW760]
gi|165898208|gb|EDR25141.1| rab17, putative [Entamoeba dispar SAW760]
Length = 209
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 107/180 (59%), Gaps = 6/180 (3%)
Query: 451 MPDKREFL-YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + +E L KI+VIGE GKTS I++Y H F YRATIGVDFA+K + D E +
Sbjct: 1 MEESKEALQLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTVD-ERDVE 59
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
L+LWDIAGQE++ MTRVYY A GA I++D+T TF A +WK+DL+ KV + I
Sbjct: 60 LRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE-QSI 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIK--EHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P +L+ NK D E N A+ D K E +S TSAK + +++A + + I
Sbjct: 119 PALLVGNKADCLSEE-ELNKAQEDLMAKVAEQKYSDGILTSAKSGLAVEEAMAKITRLIF 177
>gi|326933736|ref|XP_003212956.1| PREDICTED: ras-related protein Rab-7L1-like [Meleagris gallopavo]
Length = 139
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 68/85 (80%)
Query: 493 VDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK 552
VDFALKV+ W +RLQLWDIAGQERF +MTR+YY+EA I+FDVT +TF K
Sbjct: 14 VDFALKVVQWSESETVRLQLWDIAGQERFTSMTRLYYREASACIIMFDVTNVSTFSNSQK 73
Query: 553 WKQDLDAKVTLPDGNPIPCVLLANK 577
WKQDLD+K+TLPDG+P+PC+LLANK
Sbjct: 74 WKQDLDSKLTLPDGSPVPCLLLANK 98
>gi|449672842|ref|XP_002161756.2| PREDICTED: ras-related protein Rab-32-like [Hydra magnipapillata]
Length = 246
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 87/138 (63%), Gaps = 16/138 (11%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
+ +V+YKEAVG I+FDVT+ F+ V+KWK DLD+KV LP+G PIPCVLLANKCDQ
Sbjct: 6 LAKVFYKEAVGCMIIFDVTQPQAFETVIKWKLDLDSKVHLPNGQPIPCVLLANKCDQVGI 65
Query: 584 GIAN---NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSHA 640
+ N + +D++ ++ F WFETSAK+NIN+D+AAK+L++K+
Sbjct: 66 LLYNFYFYKSCMDKYCIDNGFHSWFETSAKENINVDNAAKSLIKKM-------------P 112
Query: 641 TSEAVFSLNRNSQETKNG 658
V+ N Q TKN
Sbjct: 113 KKCCVYGCKTNHQSTKNN 130
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 121/202 (59%), Gaps = 29/202 (14%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ +FLYKI+++GE G GK++++ R+ F P R+TIGV+FA + +++ + I R Q+
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNI-RAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDGNP 568
WD AGQER+ +T YY+ A+GA +V+D+T+ +F++V KW +L D KV
Sbjct: 64 WDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQ----- 118
Query: 569 IPCVLLANKCD-------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+++ NKCD Q EG +E K++N + +FETSA D N+++A T
Sbjct: 119 ---MVIGNKCDLSQTREVQTSEG--------EELAKKNN-AFFFETSALDGSNVEEAFMT 166
Query: 622 LVQKILENDKVQANGDSHATSE 643
L++KI ++ +G+ T+E
Sbjct: 167 LLKKIYDDSSKSVDGEQSNTNE 188
>gi|429327073|gb|AFZ78865.1| Ras family protein [Coptotermes formosanus]
Length = 208
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 8/204 (3%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+G++G GK+SII+R+V + F+ ++T+GV+F K ++ + ++QLWD+ G
Sbjct: 13 ILKLLVVGDIGCGKSSIIRRFVEKQFNESSKSTVGVEFYSKEVTLSDKKHYQVQLWDVGG 72
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
Q +TR +YK AV IVFDV R AT +WKQD+D KV G+P+PC+L+ NK
Sbjct: 73 QSSAQLLTRSFYKGAVAVLIVFDVVRPATLVTAGQWKQDVDQKVKNLQGSPVPCILIGNK 132
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGD 637
D + D F +E++F G+ SAK ID + Q +++ A +
Sbjct: 133 SDLYSNDQEIKEKEFDIFSEENDFIGFHSVSAKTGDKIDKVIVDIAQYVIDFKIFPATEE 192
Query: 638 SHATSEAVFSLNRNSQETKNGRNC 661
S S+N N + + NC
Sbjct: 193 S--------SVNLNPEASHKNSNC 208
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 121/202 (59%), Gaps = 29/202 (14%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ +FLYKI+++GE G GK++++ R+ F P R+TIGV+FA + +++ + I R Q+
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNI-RAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDGNP 568
WD AGQER+ +T YY+ A+GA +V+D+T+ +F++V KW +L D KV
Sbjct: 64 WDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQ----- 118
Query: 569 IPCVLLANKCD-------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+++ NKCD Q EG +E K++N + +FETSA D N+++A T
Sbjct: 119 ---MVIGNKCDLSQTREVQTTEG--------EELAKKNN-AFFFETSALDGSNVEEAFMT 166
Query: 622 LVQKILENDKVQANGDSHATSE 643
L++KI ++ +G+ T+E
Sbjct: 167 LLKKIYDDSSKSVDGEQSNTNE 188
>gi|67481145|ref|XP_655922.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56473090|gb|EAL50536.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790126|dbj|BAD82859.1| small GTPase EhRabX11 [Entamoeba histolytica]
Length = 209
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 4/179 (2%)
Query: 451 MPDKREFL-YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M + +E L KI+VIGE GKTS I++Y H F YRATIGVDFA+K + D E +
Sbjct: 1 MEESKEALQLKIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTVD-ERDVE 59
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
L+LWDIAGQE++ MTRVYY A GA I++D+T TF A +WK+DL+ KV + I
Sbjct: 60 LRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE-QSI 118
Query: 570 PCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P +L+ NK D +E + + + E +S TSAK + +++A + + I
Sbjct: 119 PALLVGNKADCLSEEELKKAQEDLMAKVAEQKYSDGILTSAKSGLAVEEAMAKITRLIF 177
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 110/178 (61%), Gaps = 11/178 (6%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ +FLYKI+++GE G GK++++ R+ F P R+TIGV+FA + + + HE IR Q+
Sbjct: 7 DEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVY-HEKNIRAQI 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+T+ ++F++V +W +L + +
Sbjct: 66 WDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENA----DRKVLQM 121
Query: 573 LLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++ NK D Q +E K + E N + +FETSA D N++DA TL++KI +
Sbjct: 122 IIGNKSDLNQTREVTTEEGKK----LAEDNKAFFFETSALDGNNVEDAFMTLLKKIYD 175
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 127 bits (320), Expect = 2e-26, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 116/195 (59%), Gaps = 7/195 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + D + I +LQ+WD
Sbjct: 7 DYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ TFD + KW +++D + + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIDEHAS----EGVERMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + +A+ K + +EHN ++ETSAKDNI +++A L Q IL + A
Sbjct: 122 NKCDMNDKRMASK-EKGEGIAREHNIK-FYETSAKDNICVEEAFMRLTQDILRKHQAGAT 179
Query: 636 GDSHATSEAVFSLNR 650
D T + NR
Sbjct: 180 QDQATTGVVIPKENR 194
>gi|407041312|gb|EKE40659.1| Rab family GTPase, partial [Entamoeba nuttalli P19]
Length = 208
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI+VIGE GKTS I++Y H F YRATIGVDFA+K + D E + L+LWDIAGQE
Sbjct: 10 KIIVIGEPSVGKTSTIRKYCHGVFDQLYRATIGVDFAVKFTTVD-ERDVELRLWDIAGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
++ MTRVYY A GA I++D+T TF A +WK+DL+ KV + IP +L+ NK D
Sbjct: 69 KYIAMTRVYYNGAHGAIIMYDLTNPDTFAATDRWKEDLENKVKFNE-QSIPALLVGNKAD 127
Query: 580 -QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+E + + + E +S TSAK + +++A + + I
Sbjct: 128 CLSEEELKKAQEDLMAKVAEQKYSDGILTSAKSGLAVEEAMAKITRLIF 176
>gi|390339817|ref|XP_003725091.1| PREDICTED: ras-related protein RABE1a isoform 1 [Strongylocentrotus
purpuratus]
gi|390339819|ref|XP_785818.3| PREDICTED: ras-related protein RABE1a isoform 2 [Strongylocentrotus
purpuratus]
Length = 218
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 105/175 (60%), Gaps = 6/175 (3%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKIL+IG G GKT +++RYV F + +AT+G+DF ++ L D + I RLQLWD +GQ
Sbjct: 18 YKILLIGGSGVGKTCLLRRYVEGEFPLNSKATLGLDFKIRTLIVDTDEI-RLQLWDTSGQ 76
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +MT+ YY+ A G IV+DVT +F + W D+ + P+G + VL+ NK
Sbjct: 77 ERFRSMTQAYYRGAAGIVIVYDVTAEDSFTTLTDWLGDV--SMYAPEG--VKMVLIGNKS 132
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
D ++ + +EF KEH +FETSA N N+ +A + L + +LE + Q
Sbjct: 133 DADEDERVISQQAGEEFAKEHGLK-YFETSAVTNQNVAEAFEHLAKLLLEKENKQ 186
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 121/202 (59%), Gaps = 29/202 (14%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ +FLYKI+++GE G GK++++ R+ F P R+TIGV+FA + +++ + I R Q+
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNI-RAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDGNP 568
WD AGQER+ +T YY+ A+GA +V+D+T+ +F++V KW +L D KV
Sbjct: 64 WDTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQ----- 118
Query: 569 IPCVLLANKCD-------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+++ NKCD Q EG +E K++N + +FETSA D N+++A T
Sbjct: 119 ---MVIGNKCDLNQTREVQTSEG--------EELAKKNN-AFFFETSALDGSNVEEAFMT 166
Query: 622 LVQKILENDKVQANGDSHATSE 643
L++KI ++ +G+ + +E
Sbjct: 167 LLKKIYDDSSKSVDGEQSSNNE 188
>gi|440297920|gb|ELP90561.1| rab17, putative [Entamoeba invadens IP1]
Length = 209
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 451 MPDKREFL-YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
M D +E L KI+VIGE GKTS I++Y H F YR TIGVDFA+K+ + D + +
Sbjct: 1 MDDLKETLQLKIIVIGEPNVGKTSTIRKYCHGVFDQLYRPTIGVDFAVKMTTVDDKDV-E 59
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
L+LWDIAGQE++ MTRVYY A GA I++D+T TF+A +WK DL+ KV + I
Sbjct: 60 LRLWDIAGQEKYIAMTRVYYNGAHGAIIMYDLTNPETFNATDRWKDDLENKVKFNE-QSI 118
Query: 570 PCVLLANKCD-----QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
P +L+ NK D + K + AK+D E ++ TSAK + +++A + +
Sbjct: 119 PALLVGNKADALTEAELKRAEEDLRAKVD----EQKYADGILTSAKSGLAVEEAMAKITR 174
Query: 625 KIL 627
I
Sbjct: 175 LIF 177
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 126 bits (317), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 117/204 (57%), Gaps = 9/204 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKTSII R+ FSP Y +TIG+DF +K + + I+L
Sbjct: 1 MAHKYDFLFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRGKR-IKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + KW + ++ L +
Sbjct: 60 QIWDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIE----LHASEDVQ 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+LLANKCD E A + + ++ K H + ETSA+ NINI A L + IL +
Sbjct: 116 KILLANKCDV-IERRAVSSERGEKIAKAHGIK-FLETSARSNINIQKAFGDLAEAIL--N 171
Query: 631 KVQANGDSHATSEAVFSLNRNSQE 654
KV + T+ ++R S +
Sbjct: 172 KVTGDEQVEKTATVRPGISRTSTK 195
>gi|426333486|ref|XP_004028308.1| PREDICTED: ras-related protein Rab-7L1 [Gorilla gorilla gorilla]
gi|426333488|ref|XP_004028309.1| PREDICTED: ras-related protein Rab-7L1 [Gorilla gorilla gorilla]
gi|426333490|ref|XP_004028310.1| PREDICTED: ras-related protein Rab-7L1 [Gorilla gorilla gorilla]
gi|426333492|ref|XP_004028311.1| PREDICTED: ras-related protein Rab-7L1 [Gorilla gorilla gorilla]
Length = 131
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LLANKCD
Sbjct: 1 MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 61 AVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 104
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 107/173 (61%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW ++++ + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHAN----EDVEKMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + AK ++ + EHN +FETSAK NINI+ A TL + +L
Sbjct: 122 NKCDMEDVRVV-SKAKGEQIVSEHNIR-FFETSAKANINIEKAFLTLAEDVLH 172
>gi|208609966|ref|NP_001129136.1| ras-related protein Rab-7L1 isoform 3 [Homo sapiens]
gi|332248158|ref|XP_003273229.1| PREDICTED: ras-related protein Rab-7L1 isoform 3 [Nomascus
leucogenys]
gi|332248160|ref|XP_003273230.1| PREDICTED: ras-related protein Rab-7L1 isoform 4 [Nomascus
leucogenys]
gi|332248162|ref|XP_003273231.1| PREDICTED: ras-related protein Rab-7L1 isoform 5 [Nomascus
leucogenys]
gi|332248164|ref|XP_003273232.1| PREDICTED: ras-related protein Rab-7L1 isoform 6 [Nomascus
leucogenys]
gi|332811510|ref|XP_003308712.1| PREDICTED: uncharacterized protein LOC469654 [Pan troglodytes]
gi|332811512|ref|XP_003308713.1| PREDICTED: uncharacterized protein LOC469654 [Pan troglodytes]
gi|332811514|ref|XP_003308714.1| PREDICTED: uncharacterized protein LOC469654 [Pan troglodytes]
gi|332811516|ref|XP_003308715.1| PREDICTED: uncharacterized protein LOC469654 [Pan troglodytes]
Length = 131
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LLANKCD
Sbjct: 1 MTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLLANKCDLSPW 60
Query: 584 GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 61 AVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 104
>gi|167387392|ref|XP_001738141.1| GTP-binding protein YPTC1 [Entamoeba dispar SAW760]
gi|165898771|gb|EDR25554.1| GTP-binding protein YPTC1, putative [Entamoeba dispar SAW760]
Length = 203
Score = 125 bits (315), Expect = 6e-26, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+KIL+IGE G GKT++++R+ F P Y T+GVDF LK++ ++E II++QLWD AG
Sbjct: 11 LFKILIIGESGVGKTALMQRFCDNIFEPCYMPTVGVDFKLKLMKLNNE-IIKMQLWDTAG 69
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF N+T YY+ G IV+DVT +TFD + W ++ K + NP ++ NK
Sbjct: 70 QERFRNITSSYYRGTQGVLIVYDVTDTSTFDQISSWFNEVMRKT---EHNPPVIYIIGNK 126
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
D K+ I P I+ +K+ +F SAKD ++D L IL+ ++
Sbjct: 127 MDL-KDRICVQPESIERLVKKIGGIKYFFISAKDGNGVEDIFSQLGFDILQKKEL 180
>gi|158323602|gb|ABW34333.1| Rab38, partial [Capra hircus]
Length = 81
Score = 125 bits (314), Expect = 7e-26, Method: Composition-based stats.
Identities = 55/81 (67%), Positives = 67/81 (82%)
Query: 524 MTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKE 583
MTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLLANKCDQ K+
Sbjct: 1 MTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLLANKCDQGKD 60
Query: 584 GIANNPAKIDEFIKEHNFSGW 604
+ NN K+D+F KEH F GW
Sbjct: 61 VLLNNGLKMDQFCKEHGFVGW 81
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 106/173 (61%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW ++++ + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHAN----EDVEKMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + AK ++ EHN +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDVRVV-SKAKGEQIASEHNIR-FFETSAKANINIEKAFLTLAEDILH 172
>gi|403353512|gb|EJY76294.1| hypothetical protein OXYTRI_02199 [Oxytricha trifallax]
Length = 240
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 119/208 (57%), Gaps = 3/208 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ K+++IG+ GKTSII+ + H+ F+ ++ TIG DF+ K ++ + I+ LQ+WD
Sbjct: 11 RKCFIKLVIIGDSSVGKTSIIQMFQHKHFNQSFKPTIGADFSTKEITMEDNRIVNLQIWD 70
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
AGQERF ++ +Y+ A +V+D+T +FD ++ W+Q K D +P ++L
Sbjct: 71 TAGQERFQSLGSAFYRGADCCILVYDITNPQSFDHIMNWRQVFLIKSEPKDPQTLPFLIL 130
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEH--NFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NKCD + + F +++ N ++ETSAK+NIN+++A + L++K+++ +
Sbjct: 131 GNKCDVEESERRVTTIEAKRFCQQNGSNNMLFYETSAKNNINVEEAFRELIKKVVKRQE- 189
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRN 660
+ N + +NR+ E KN N
Sbjct: 190 ELNKTLLGIDDKDIIVNRSKAEQKNFEN 217
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI+VIG+ GK++++ RY F+P+ +ATIGV+F +V+ D + + + Q+WD
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEV-KAQIWDT 66
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA IV+D++R TFD V +W ++L D N + +L+
Sbjct: 67 AGQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMH---ADSNVVK-MLVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NK D E I P + + E + ETSA DN N+ A + +V++I N K
Sbjct: 123 NKSDL--EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKML 180
Query: 635 NGDSHATSEAVFSLNR 650
N DS+ + SLNR
Sbjct: 181 NSDSYKSE---LSLNR 193
>gi|118386344|ref|XP_001026291.1| Ras family protein [Tetrahymena thermophila]
gi|89308058|gb|EAS06046.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777822|dbj|BAJ21307.1| Rab-family small GTPase RabX12 [Tetrahymena thermophila]
Length = 233
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI+V+GE GKT I+ RY F T+G+DF K+L + +TI RLQLWDIAGQE
Sbjct: 8 KIIVVGEQNVGKTCILARYSRDQFDTTCPPTLGMDFQSKLLEYKGKTI-RLQLWDIAGQE 66
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
R+ +++++Y + A GA IV DV + LKWK+ ++ +G PIP +L+ NK D
Sbjct: 67 RYNSVSKLYVRGAYGALIVADVKEEESLQNTLKWKKMIEDSCDQKNGKPIPMILVQNKVD 126
Query: 580 QPKEGIA-----NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ K G+ + + F +++ F+G + SAKDN NI D L+ +I+
Sbjct: 127 ELK-GVGQIQDFQKESYLKSFAQQNGFNGALQVSAKDNTNIPDIFNMLIDEII 178
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ KEH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAKEHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 108/187 (57%), Gaps = 13/187 (6%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+KIL+IG+ G GKT ++ RYV + F P + +TIG+DF +K + + + I +LQ+WD AG
Sbjct: 9 LFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKI-KLQIWDTAG 67
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF +T YY+ A+G +++D+T TFD V W ++ +L N + +L+ANK
Sbjct: 68 QERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTW---MNRTFSLAS-NEVEKLLIANK 123
Query: 578 CDQPKEGIAN---NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
CD + + K +E+ G+ ETSAK + N+ A + L + IL N ++
Sbjct: 124 CDMAHNRVVSYEEGRQKAEEY-----GIGFLETSAKSSTNVHKAFEELTRAILHNSSIRR 178
Query: 635 NGDSHAT 641
+ S T
Sbjct: 179 HESSTVT 185
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
++L+K +++G+ G GKT+++ R+ FS ++TIGVDFA K ++ D++ +++ QLWD
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNK-VVKAQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
AGQ+R+ +T YY+ AVGA +V+D+TR T+D +L+W ++L D N + +L+
Sbjct: 66 TAGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELR---DFADTNAV-IMLV 121
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D K A + + F EH S + ETSA D+ N+D+A T+V I
Sbjct: 122 GNKSD-LKHIRAVSTEEAAAFSAEHGLS-FLETSALDSSNVDEAFNTVVNDIF 172
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|294955682|ref|XP_002788627.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239904168|gb|EER20423.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS++ +YV++ FSP Y+ATIG DF K ++ D + ++ LQ+W
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTID-DKVVTLQIW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+D+T +F+++ W+ + + + D P V+
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVV 124
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
+ NK D + K ++ A+ + + N FETSAKD++N++ A + ++ L+N+
Sbjct: 125 VGNKLDMEAKRKVSK--ARATTWCRSKNTIPCFETSAKDSLNVEQAFIEIARRALQNEAA 182
Query: 633 QANGDSHATSEAVFSLNRNSQETK--NGRNCAC 663
A +LN E++ N + C C
Sbjct: 183 MAKEQEQMYLSQTLNLNNPPAESQSSNVQQCEC 215
>gi|440298637|gb|ELP91268.1| GTP-binding protein YPTM1, putative [Entamoeba invadens IP1]
Length = 207
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+KIL+IGE G GKT+I++R+ F P Y +T+GVDF KV+ ++T+ ++QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGNKTV-KMQLWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQ+RF N+T YY+ G IV+D+T A+FD V W ++ + + +P +L+
Sbjct: 66 AGQDRFRNITASYYRGTQGVLIVYDITDRASFDKVSSWFTEVRDR---TENDPPVIILVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D A +++ ++ F SAKD IDD L Q I+ KV
Sbjct: 123 NKTDLMDHAAVKQEA-VEQLARQLGGVQTFTCSAKDGSGIDDVFNALTQSIIS--KVGGA 179
Query: 636 GDSHATSEAVFSLN--RNSQETKNGRNCA 662
D A ++ LN + Q+TK G C
Sbjct: 180 ADKKA-DPSIVPLNNPQGQQQTKEGGGCC 207
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 122/215 (56%), Gaps = 17/215 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+PH +ATIGV+F + ++ + + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D+TR +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD I P + + + E + ETSA D N+ A + ++++I N +
Sbjct: 126 NKCDLGD--IRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVL 183
Query: 635 NGDSHATSEAVFSLNRNS------QETKNGRNCAC 663
N DS+ +A SLNR S E K G C
Sbjct: 184 NSDSY---KAELSLNRVSIDGDSKDEQKQGSRFGC 215
>gi|291398900|ref|XP_002715144.1| PREDICTED: RAB3B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFECLVDAIC--DKM---SDSLDTDPSMLGASKNTRLSDAPPLLQQNCSC 219
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 120/198 (60%), Gaps = 11/198 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+PH +ATIGV+F + + D + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+DV+R +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I P + + + E + ETSA D+ N++ A + ++++I + +
Sbjct: 126 NKCDL--ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKIL 183
Query: 635 NGDSHATSEAVFSLNRNS 652
N DS+ +A +LNR S
Sbjct: 184 NSDSY---KAELTLNRVS 198
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE-TIIRLQLWD 514
+FLYKI++IGE G GK++++ R+ F R+TIGV+FA + S HE +IR Q+WD
Sbjct: 31 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATR--SIQHEGKVIRAQIWD 88
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVL 573
AGQER+ +T YY+ AVGA +V+D+T+ TF ++ +W +L + +P I ++
Sbjct: 89 TAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELK-----DNADPKIVIMI 143
Query: 574 LANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+ NK D Q +E I AK EF ++ N +FETSA D N++ A K+L+ +I + +
Sbjct: 144 IGNKADLAQTRE-IEEATAK--EFCQKQNLF-FFETSALDGTNVETAFKSLLVEIFKQN 198
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A D+ +EH +FETSAK + N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKERA--DKLAREHGIR-FFETSAKSSTNVDEAFSSLARDILHK 172
Query: 630 DKVQANGDSHATSEAVF 646
+ GDS+ S A
Sbjct: 173 SGARRLGDSNKASSAAL 189
>gi|19923750|ref|NP_002858.2| ras-related protein Rab-3B [Homo sapiens]
gi|38258903|sp|P20337.2|RAB3B_HUMAN RecName: Full=Ras-related protein Rab-3B
gi|20379040|gb|AAM21080.1|AF498932_1 small GTP binding protein RAB3B [Homo sapiens]
gi|13477155|gb|AAH05035.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|119627207|gb|EAX06802.1| RAB3B, member RAS oncogene family [Homo sapiens]
gi|312152638|gb|ADQ32831.1| RAB3B, member RAS oncogene family [synthetic construct]
Length = 219
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|395826817|ref|XP_003786611.1| PREDICTED: ras-related protein Rab-32-like [Otolemur garnettii]
Length = 146
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 70/84 (83%), Gaps = 1/84 (1%)
Query: 548 DAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFET 607
+AVLKWK DLD+KV LP+G+PIP VLLANKCDQ ++G +P+++D+F EH F+GWFET
Sbjct: 36 EAVLKWKNDLDSKVHLPNGSPIPAVLLANKCDQKRDG-GQSPSQMDQFCSEHGFTGWFET 94
Query: 608 SAKDNINIDDAAKTLVQKILENDK 631
SAKDNINID+AA+ LV+ IL N +
Sbjct: 95 SAKDNINIDEAARFLVENILANHQ 118
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + D + I
Sbjct: 24 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKI- 82
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + +
Sbjct: 83 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AG 138
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ +LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 139 VERLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 195
>gi|296207942|ref|XP_002750863.1| PREDICTED: ras-related protein Rab-3B [Callithrix jacchus]
Length = 219
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 109/172 (63%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L KI++IG+ G GKT+++ R+ F+P ++TIGV+FA K + + +TI + Q+WD
Sbjct: 7 DYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTI-KAQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+GA +++D+T + TF+++ KW ++L I +L+
Sbjct: 66 AGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENA----DEKIIVMLVG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD ++ A A EF K N + ETSA++ N+++A +TL+ +I+
Sbjct: 122 NKCDLSEQR-AVTSANALEFAKAQNLL-FIETSAREATNVNEAFQTLICEIV 171
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 107/175 (61%), Gaps = 8/175 (4%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
PD ++L+K+L+IG+ G GK+ ++ R+ + FS Y +TIGVDF ++ + D + +++LQ
Sbjct: 3 PD-YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGK-VVKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ A G IV+DVT +F V W Q+++ + +
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYA----NSTVNR 116
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD PK + ++ F KEH + ETSAK+ IN++DA + ++I
Sbjct: 117 LLVGNKCDLPKSRAVDTVDAMN-FAKEHQMP-FLETSAKEAINVEDAFMEMARQI 169
>gi|12963723|ref|NP_076026.1| ras-related protein Rab-3B [Mus musculus]
gi|38258239|sp|Q9CZT8.1|RAB3B_MOUSE RecName: Full=Ras-related protein Rab-3B
gi|12597435|gb|AAG60046.1|AF312036_1 small GTP binding protein Rab3B [Mus musculus]
gi|12848741|dbj|BAB28071.1| unnamed protein product [Mus musculus]
gi|26350141|dbj|BAC38710.1| unnamed protein product [Mus musculus]
gi|34980993|gb|AAH57173.1| RAB3B, member RAS oncogene family [Mus musculus]
gi|56078684|gb|AAH51918.2| RAB3B, member RAS oncogene family [Mus musculus]
gi|112292945|dbj|BAF02850.1| Rab3B [Mus musculus]
gi|148698774|gb|EDL30721.1| RAB3B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 219
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGIKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 107/175 (61%), Gaps = 8/175 (4%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
PD ++L+K+L+IG+ G GK+ ++ R+ + FS Y +TIGVDF ++ + D + +++LQ
Sbjct: 3 PD-YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGK-VVKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ A G IV+DVT +F V W Q+++ + +
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYA----NSTVNR 116
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD PK + ++ F KEH + ETSAK+ IN++DA + ++I
Sbjct: 117 LLVGNKCDLPKSRAVDTVDAMN-FAKEHQMP-FLETSAKEAINVEDAFMEMARQI 169
>gi|363743053|ref|XP_001235016.2| PREDICTED: ras-related protein Rab-7b-like [Gallus gallus]
Length = 207
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI++IG LG GKTS++ +YVH+ F YR T+G KV++ D +T ++LQ+WD GQE
Sbjct: 17 KIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVD-KTPLKLQIWDTGGQE 75
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D KV +P + P V+L NK D
Sbjct: 76 RFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKV-IPRDHDFPMVVLGNKID 134
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++ A + KE + +FE SAK+NIN+ A +TL ++ L
Sbjct: 135 LCDRQVSKEIAS--AWCKEKDIP-YFEVSAKNNINVAQAFETLAKQAL 179
>gi|148698775|gb|EDL30722.1| RAB3B, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 225
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 9 SVTDGKTGIKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 58
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 59 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 117
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 118 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 171
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 172 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 225
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ TFD + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + P + E I +EH + ETSAK N+N++ A TL + IL
Sbjct: 122 NKCDMEDKRMI--PKERGESIAREHGIK-FLETSAKSNVNVEKAFMTLAEDIL 171
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK N+NI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANVNIEKAFLTLAEDIL 171
>gi|388452940|ref|NP_001253721.1| ras-related protein Rab-3B [Macaca mulatta]
gi|114556592|ref|XP_001143400.1| PREDICTED: ras-related protein Rab-3B [Pan troglodytes]
gi|332219762|ref|XP_003259028.1| PREDICTED: ras-related protein Rab-3B [Nomascus leucogenys]
gi|397518878|ref|XP_003829603.1| PREDICTED: ras-related protein Rab-3B [Pan paniscus]
gi|426329634|ref|XP_004025842.1| PREDICTED: ras-related protein Rab-3B [Gorilla gorilla gorilla]
gi|387542674|gb|AFJ71964.1| ras-related protein Rab-3B [Macaca mulatta]
gi|410207396|gb|JAA00917.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410251308|gb|JAA13621.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410298026|gb|JAA27613.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329635|gb|JAA33764.1| RAB3B, member RAS oncogene family [Pan troglodytes]
gi|410329637|gb|JAA33765.1| RAB3B, member RAS oncogene family [Pan troglodytes]
Length = 219
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|357612732|gb|EHJ68147.1| hypothetical protein KGM_14978 [Danaus plexippus]
Length = 217
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 113/186 (60%), Gaps = 12/186 (6%)
Query: 446 SPYSKM--PDKR-EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW 502
+PY+ M PD++ ++L+KI++IG+ G GKT I++R F + TIGVDF++K L
Sbjct: 5 NPYTLMSVPDEQFDYLFKIVLIGDCGTGKTCIVQRLKSGNFIERHGNTIGVDFSMKTLIV 64
Query: 503 DHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT 562
D + + +LQ+WD AGQERF +T+ YY+ A G IV+D+T+ +TF ++ KW +++ +
Sbjct: 65 DGKRV-KLQIWDTAGQERFRTITQSYYRSANGVIIVYDITKRSTFLSIQKWIEEVRRYTS 123
Query: 563 LPDGNPIPCVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
+ + L+ NKCD + +E + P ++ E F ETSAKDN N++D +
Sbjct: 124 ----SNVIVSLIGNKCDLTEQREVEPDEPKSFCRYVPEIMFV--METSAKDNTNVEDTFR 177
Query: 621 TLVQKI 626
+ ++
Sbjct: 178 NIATEL 183
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF +K + D + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVS 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+LL NKCD + K ++ ++ K+H +FETSAK +IN++++ +L IL+
Sbjct: 116 RMLLGNKCDIEAKRKVSKETG--EKLAKDHGIR-FFETSAKSSINVEESFLSLAHDILQ 171
>gi|444724879|gb|ELW65466.1| Ras-related protein Rab-3B [Tupaia chinensis]
Length = 219
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V +++++ + +NC+C
Sbjct: 166 AKENISVRQAFECLVDAIC--DKM---SDSLDTDPSVLGTSKHTRLSDTPPLLQQNCSC 219
>gi|410967277|ref|XP_003990147.1| PREDICTED: ras-related protein Rab-3B [Felis catus]
Length = 219
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSVLGTSKNTRLSDTPPLLQQNCSC 219
>gi|158256738|dbj|BAF84342.1| unnamed protein product [Homo sapiens]
Length = 219
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV W + + + IP + NKCD +E + P + + + E +FE S
Sbjct: 112 AVQDWATQIKT-YSWDNAQVIP---VGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSNTPPLLQQNCSC 219
>gi|297664935|ref|XP_002810871.1| PREDICTED: ras-related protein Rab-3B [Pongo abelii]
Length = 219
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSDTPQLLQQNCSC 219
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ ++ Y +TIG+DF +K + D + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENAS----AGVT 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+LL NKCD + K ++ + KEH +FETSAK +IN++++ + L + IL+
Sbjct: 116 RMLLGNKCDVEAKRKVSKETG--ETLAKEHAIR-FFETSAKSSINVEESFQALARDILQ 171
>gi|340501433|gb|EGR28223.1| hypothetical protein IMG5_181520 [Ichthyophthirius multifiliis]
Length = 735
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 8/183 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M D F+ KI+V+GE GKT I+ RY F T+G+DF+ K+L ++ TI RL
Sbjct: 1 MTDNNPFI-KIIVVGEQNVGKTCILARYSRGQFDNSCPPTLGMDFSSKLLEYNGNTI-RL 58
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWDIAGQER+ +++++Y + A GA +V D+T + LKWK+ ++ + PIP
Sbjct: 59 QLWDIAGQERYTSVSKLYVRGAYGALVVADITNENSLYETLKWKKIIEESCDYLNNKPIP 118
Query: 571 CVLLANKCDQPKE-GIANNPAKIDEFI----KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
L+ NK D+ K GI K + F+ KE+ FSG + SAKDN NI D + L++
Sbjct: 119 MFLVQNKLDEVKGLGILQEYQK-ESFLKTWSKENGFSGCLQVSAKDNTNIPDIFQMLIEL 177
Query: 626 ILE 628
I++
Sbjct: 178 IIK 180
>gi|355558002|gb|EHH14782.1| hypothetical protein EGK_00759 [Macaca mulatta]
gi|380787191|gb|AFE65471.1| ras-related protein Rab-3B [Macaca mulatta]
Length = 219
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFS 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|354468180|ref|XP_003496545.1| PREDICTED: ras-related protein Rab-3B-like [Cricetulus griseus]
gi|81870701|sp|Q5KTJ7.1|RAB3B_MESAU RecName: Full=Ras-related protein Rab-3B
gi|57157443|dbj|BAD83699.1| Rab3B [Mesocricetus auratus]
Length = 219
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 121/214 (56%), Gaps = 9/214 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E+
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKES 172
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
Q ++ E ++N Q N C C
Sbjct: 173 MSQQNLNETTQKKEDKGNVNLKGQSLTNTGGCCC 206
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ FS + +TIG+DF +K + + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ TFD + KW +++ + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHAN----EDVEKMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + N E I + N + ETSAK NIN++ A TL IL+
Sbjct: 122 NKCDMDDKRMINKDR--GETIAKENGIKFMETSAKANINVEQAFMTLAADILK 172
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 13/179 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ +FL+KI++IG+ G GKT+I+KR+++ F + TIGV+FA K L +++ + Q+
Sbjct: 7 EEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSV-KCQI 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGAFI +DVTR TF KW +L DGN I +
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEH---ADGN-IVII 121
Query: 573 LLANKCDQPKEGIANNPAKIDE---FIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++ NK D + + DE F ++ G+ ETSA D NID A +V I
Sbjct: 122 MIGNKTD----AVDQRAVRTDEASNFCEQQKI-GFIETSALDGTNIDVAFNKIVANIFH 175
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 121 bits (303), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 13/207 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ TFD + KW ++++ + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD I + + ++ +EH + ETSAK NINI+ A + L Q IL K + N
Sbjct: 122 NKCDMDDRRIVSR-ERGEQIAREHGIR-FLETSAKTNINIEQAFQYLAQDIL---KKELN 176
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCA 662
DS S +++ + Q+ K G C
Sbjct: 177 KDSEEPSN---NIHVHDQKDKKGGCCG 200
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 108/191 (56%), Gaps = 7/191 (3%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I
Sbjct: 89 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKI- 147
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + +
Sbjct: 148 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AG 203
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+ +LL NKCD + I + +EH +FETSAK + N+D+A +L + IL
Sbjct: 204 VERLLLGNKCDMEAKRKVQKEQAI-KLAREHGIR-FFETSAKSSTNVDEAFSSLARDILL 261
Query: 629 NDKVQANGDSH 639
+ +G+SH
Sbjct: 262 KSGGRRSGNSH 272
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET-IIRLQLWD 514
+FLYKI++IGE G GK++++ R+ F R+TIGV+FA + S HE +IR Q+WD
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATR--SIQHEGKVIRAQIWD 64
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVL 573
AGQER+ +T YY+ AVGA +V+D+T+ TF ++ +W +L + +P I ++
Sbjct: 65 TAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELK-----DNADPKIVIMI 119
Query: 574 LANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+ NK D Q +E + AK EF ++ N +FETSA D N++ A K+L+ +I + +
Sbjct: 120 IGNKADLAQTRE-VEEATAK--EFCQKQNLF-FFETSALDGTNVETAFKSLLVEIFKQN 174
>gi|550066|gb|AAA60243.1| GTP-binding protein [Homo sapiens]
Length = 219
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLLRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKM--- 187
Query: 636 GDSHATSEAVFSLNRNSQETKN----GRNCAC 663
DS T ++ ++N++ + +NC+C
Sbjct: 188 SDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|351697769|gb|EHB00688.1| Ras-related protein Rab-3B [Heterocephalus glaber]
Length = 219
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 120/212 (56%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + E ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRQEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAIF--DKM--- 187
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
DS T +V ++N++ + +NC+C
Sbjct: 188 SDSLDTDPSVLGTSKNTRLSDTSPLLQQNCSC 219
>gi|430814192|emb|CCJ28537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 205
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 114/199 (57%), Gaps = 12/199 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ GAGKTS++ +YV++ FS Y+ATIG DF K ++ D + ++ +
Sbjct: 1 MSSRKKVLLKVIILGDSGAGKTSLLNQYVNKKFSNQYKATIGADFLTKEVTVD-DRVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +VFDVT + +F+ + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVTNSKSFETLDSWRDEFFIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKI 626
V L NK D + A+ + + + +FETSAK+ IN+D A AKT++
Sbjct: 120 FVCLGNKIDVEESKRTVPQARARTYCESKGNTEYFETSAKECINVDQAFEHIAKTVLSLE 179
Query: 627 LENDK-------VQANGDS 638
END +Q N DS
Sbjct: 180 CENDYTGEFLDPIQINLDS 198
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF +K + D + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVS 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+LL NKCD + K ++ ++ K+H +FETSAK +IN++++ L + IL+
Sbjct: 116 RMLLGNKCDIEAKRKVSKETG--EKLAKDHGIR-FFETSAKSSINVEESFLALARDILK 171
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET-IIRLQLWD 514
+FLYKI++IGE G GK++++ R+ F R+TIGV+FA + S HE +IR Q+WD
Sbjct: 7 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATR--SIQHEGKVIRAQIWD 64
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVL 573
AGQER+ +T YY+ AVGA +V+D+T+ TF ++ +W +L + +P I ++
Sbjct: 65 TAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELK-----DNADPKIVIMI 119
Query: 574 LANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+ NK D Q +E + AK EF ++ N +FETSA D N++ A K+L+ +I + +
Sbjct: 120 IGNKADLAQTRE-VEEATAK--EFCQKQNLF-FFETSALDGTNVETAFKSLLVEIFKQN 174
>gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila]
gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777820|dbj|BAJ21306.1| Rab-family small GTPase Rab11I [Tetrahymena thermophila]
Length = 225
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 107/172 (62%), Gaps = 8/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++ +KIL+IG+ G GKTSI+ R+ F+ ++TIGV+++ K + D + +I+ +WD
Sbjct: 14 DYQFKILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYSKKTMVID-QAVIQASIWDT 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCVLL 574
AGQERF ++ + YYK A+GA +VFDVTR T + + K W Q+++ + I +L+
Sbjct: 73 AGQERFRSLAKNYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHAS----KNIKMILI 128
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NK D E I ++ F K +N + + ETSA +N NID A +TLV++I
Sbjct: 129 GNKSDLTVERIVKQEEAVN-FSKTNNLA-YMETSALNNQNIDQAFETLVREI 178
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 106/178 (59%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NI+I+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANISIEKAFLTLAEDIL 171
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ KEH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAKEHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|338721709|ref|XP_001493964.2| PREDICTED: ras-related protein Rab-3B-like [Equus caballus]
Length = 219
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSILGSSKNTRLSDTPPLLQQNCSC 219
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 115/202 (56%), Gaps = 13/202 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ RY F+ + +TIG+DF +K + + + I +LQ+WD
Sbjct: 12 DLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRI-KLQIWDT 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + KW Q+++ + + +L+
Sbjct: 71 AGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHAS----ADVERILIG 126
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + P + + + ETSAK N NI++A + L ++IL KV A
Sbjct: 127 NKCDWEARRVV--PKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILR--KVPAK 182
Query: 636 GDSHATSEAVFSLNRNSQETKN 657
+ E V LNR+ + T++
Sbjct: 183 KE----DETVLDLNRSKKSTED 200
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 22/223 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + E +YK+++IGE G GK++++ R+ F P + TIGV+FA + + ++ +TI R
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTI-RA 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDG 566
Q+WD AGQE++ +T YY+ A GA V+DV++ +FDA+ +W +L D+ +T+
Sbjct: 60 QIWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITI--- 116
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D +E N EF ++H+ + + ETSA D N++ A L+ +I
Sbjct: 117 -----MIVGNKADLKQEREVNTSDGT-EFAQKHS-AFFIETSALDGTNVEKAFSDLLIQI 169
Query: 627 -------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
L+ND V ++ T E V S +T+ G+ C
Sbjct: 170 YKKKNATLKNDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 107/178 (60%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF +K + + + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +++ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENAS----AGVS 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K ++ ++ KEH +FETSAK +IN++++ +L + IL
Sbjct: 116 RMLLGNKCDIEAKRKVSKETG--EKLAKEHGIR-FFETSAKSSINVEESFTSLARDIL 170
>gi|327277637|ref|XP_003223570.1| PREDICTED: ras-related protein Rab-10-like [Anolis carolinensis]
Length = 204
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI++ GE GKTSI++RY + + Y ATIG+DF +K +S + +T ++LQ+WD AGQE
Sbjct: 17 KIVMAGESCVGKTSILQRYTERGPTASYIATIGIDFKVKTISLN-DTTMQLQIWDTAGQE 75
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF T +++ A G +V+DVT +F + W +D+ K I +LL NKCD
Sbjct: 76 RFHTFTTSFFRGAHGFVLVYDVTSTESFQGIAHWMKDIYEKTD----ETINIILLGNKCD 131
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ E + P E + +FETSAKDNINIDDA L ++IL
Sbjct: 132 KEMERVI--PKNRGEKLAWEYGIPFFETSAKDNINIDDAFSVLAEEIL 177
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 124/223 (55%), Gaps = 22/223 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + E +YK+++IGE G GK++++ R+ F P + TIGV+FA + + ++ +TI R
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTI-RA 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDG 566
Q+WD AGQE++ +T YY+ A GA V+DV++ +FDA+ +W +L D+ +T+
Sbjct: 60 QIWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITI--- 116
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D +E N EF ++H+ + + ETSA D N++ A L+ +I
Sbjct: 117 -----MIVGNKADLKQEREVNTSDGT-EFAQKHS-AFFIETSALDGTNVEKAFSDLLIQI 169
Query: 627 -------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
L+ND V ++ T E V S +T+ G+ C
Sbjct: 170 YKKKNATLKNDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+D +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET-IIRLQLWD 514
+FLYKI++IGE G GK++++ R+ F R+TIGV+FA + S HE +IR Q+WD
Sbjct: 6 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATR--SIQHEGKVIRAQIWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVL 573
AGQER+ +T YY+ AVGA +V+D+T+ TF ++ +W +L + +P I ++
Sbjct: 64 TAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELK-----DNADPKIVIMI 118
Query: 574 LANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+ NK D Q +E + AK EF ++ N +FETSA D N++ A K+L+ +I + +
Sbjct: 119 IGNKADLAQTRE-VEEATAK--EFCQKQNLF-FFETSALDGTNVETAFKSLLVEIFKQN 173
>gi|395513171|ref|XP_003760803.1| PREDICTED: ras-related protein Rab-3A [Sarcophilus harrisii]
Length = 359
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 159 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNEKRIKLQIWDT 217
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 218 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 273
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + ++ + EH +FE SAKDNIN+ + LV I E +
Sbjct: 274 NKCDMEDERVVS--SERGRQLAEHLGFEFFEASAKDNINVKQTFERLVDIICEKMSESLD 331
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 332 TADPAVTGAKQGPQLTDQQAPPHQDCAC 359
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 9/195 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +FD V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD + K + + AK EF + N + ETSA ++ N+++A T+ ++I E+
Sbjct: 116 KLLVGNKCDLEDKRVVEYDVAK--EF-ADSNKMPFLETSALNSTNVEEAFLTMARQIKES 172
Query: 630 DKVQANGDSHATSEA 644
Q DS+A S+
Sbjct: 173 MNQQKMEDSNAASKG 187
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+P+ +ATIGV+F + + D + + + Q+WD
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEV-KAQIWDT 67
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D+TR++TF+ V +W +L+ T D + +L+
Sbjct: 68 AGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELN---THSD-TTVAKMLIG 123
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + ++++I N + Q
Sbjct: 124 NKCDL--ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 181
Query: 635 NGDSHATSEAV--FSLNRNSQETKNGRNCA 662
N DS+ V SL +N E +C
Sbjct: 182 NSDSYKEELTVNRVSLVKNENEGTKTFSCC 211
>gi|440794581|gb|ELR15741.1| FYVE zinc finger domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 333
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 19/192 (9%)
Query: 455 REFLYKILVIGELGAGK-TSIIKRYVHQFFSPHYRATIGVDFALKVLS-------WDHET 506
+++ +KI+V+G+ G GK T++I R VH ++ R T GV+FAL L+ D
Sbjct: 21 KQYTFKIVVLGDRGTGKVTALINRVVHGLYTGKERPTTGVEFALCSLNDFATSVGGDRTA 80
Query: 507 I----IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT 562
I +RL LWD+ GQE+FG TR YY+ AV +V D T+ T W DL AKV
Sbjct: 81 IRRDNVRLMLWDVGGQEKFGGKTRFYYEHAVAGIVVADATKPKTIKEAEAWVTDLRAKVA 140
Query: 563 --LPDGN--PIPCVLLANKCDQ--PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
P+G +P ++ NK DQ PK+ A P+ + EF++ ++ G++ SAK++ N++
Sbjct: 141 NKGPNGENMSVPVIMFVNKVDQVSPKQLSALTPS-LKEFVRSNDIMGFWTCSAKEDANLN 199
Query: 617 DAAKTLVQKILE 628
+ LV K+LE
Sbjct: 200 KPVQMLVTKLLE 211
>gi|13592037|ref|NP_112353.1| ras-related protein Rab-3B [Rattus norvegicus]
gi|6093900|sp|Q63941.2|RAB3B_RAT RecName: Full=Ras-related protein Rab-3B
gi|2251196|emb|CAA74341.1| Rab3B protein [Rattus norvegicus]
gi|149035702|gb|EDL90383.1| RAB3B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 219
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV G T I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGNTGIRDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVI--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 120 bits (300), Expect = 3e-24, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVVPK-AKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|73976938|ref|XP_849630.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Canis lupus
familiaris]
Length = 219
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKM--- 187
Query: 636 GDSHATSEAVFSLNRNSQETKN----GRNCAC 663
DS T + ++N++ + +NC+C
Sbjct: 188 SDSLDTDPSTLGTSKNTRLSDTPPLLQQNCSC 219
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 111/190 (58%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLK 172
Query: 630 DKVQANGDSH 639
+ +G+S+
Sbjct: 173 SGSRRSGNSN 182
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 120 bits (300), Expect = 3e-24, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + H I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL-HGKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + +K ++ +EH +FETSAK NINI+ A TL + IL+ V+
Sbjct: 122 NKCDMEDKRVVLK-SKGEQIAREHAIR-FFETSAKANINIEKAFLTLAEDILQKTPVK 177
>gi|328865692|gb|EGG14078.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 466
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R + KI++IGE GKTSI+KRYV Q F P + TIG+DF K + H+ ++ L
Sbjct: 261 MAGQRRKVLKIVIIGEKSVGKTSILKRYVDQRFVP-MKPTIGIDFVNKDVMV-HDRLVTL 318
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD +GQERF ++ YY+ A +VFDVT + ++ W+ D K+ + + + P
Sbjct: 319 QLWDTSGQERFRSLDISYYRGADCCVLVFDVTNEKSLQDLIIWRNDFIEKIGVQNQDTFP 378
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG---WFETSAKDNINIDDAAKTL 622
V+L NK D+ ++ A F+K+ G +F+TSAK NIN+++A T+
Sbjct: 379 FVVLGNKVDEESRVVSEKQAL--NFVKQ--LGGNIFYFDTSAKSNINVEEAFSTV 429
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+D T TF+ V +W +++D +
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYAC----DN 116
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ +L+ NKCD K+ + AK E+ + + ETSAK+ +N++ A T+ +I
Sbjct: 117 VNKLLVGNKCDLHTKKVVDYTTAK--EYADQLGIP-FLETSAKNAMNVEQAFMTMAAEI 172
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 105/172 (61%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK N++I+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANVSIEKAFLTLAEDIL 171
>gi|426215520|ref|XP_004002020.1| PREDICTED: ras-related protein Rab-3B [Ovis aries]
Length = 219
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKM--- 187
Query: 636 GDSHATSEAVFSLNRNSQETKN----GRNCAC 663
D+ T ++ ++N++ + +NC+C
Sbjct: 188 SDTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 219
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PTGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+DVT+ TF+ + W ++++ + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIEQHAS----EDVE 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
++L NKCD + + + ++ +E+N +FETSAK NIN+++A T+ + I
Sbjct: 116 KMILGNKCDVDDKRVVTKE-RGEQLAREYNVR-FFETSAKANINVEEAFLTIARDI 169
>gi|196010960|ref|XP_002115344.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
gi|190582115|gb|EDV22189.1| hypothetical protein TRIADDRAFT_29233 [Trichoplax adhaerens]
Length = 207
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L+K+L+IG+ G GK+SI+ R+ F Y TIGVDF ++ + D + I +LQ+WD AG
Sbjct: 9 LFKLLIIGDSGVGKSSILLRFADNLFQGTYITTIGVDFKIRTIEVDGQRI-KLQIWDTAG 67
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF +T YY+ G +V+DVT TF V +W ++D + + VL+ NK
Sbjct: 68 QERFRTITSTYYRGTHGVIVVYDVTSGETFVNVKRWLMEIDQNCEVANR-----VLVGNK 122
Query: 578 CD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
CD K+ ++ AK +F ++ FE SAKDNINI+D + + +L+
Sbjct: 123 CDCLDKKLVSTADAK--KFAEQMGIQ-LFEASAKDNINIEDVFTAITKLVLK 171
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + +K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKSKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+P+ +ATIGV+F + + D + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D+TR++TF+ V +W +L+ T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELN---THSD-TTVAKMLIG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + ++++I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 182
Query: 635 NGDSHATSEAV--FSLNRNSQETKNGRNCA 662
N DS+ V SL +N E +C
Sbjct: 183 NSDSYKEELTVNRVSLVKNENEGTKTFSCC 212
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I
Sbjct: 1 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI- 59
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + +
Sbjct: 60 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----G 115
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ +LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 VERLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 172
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS++ +YV++ FSP Y+ATIG DF K ++ D + ++ LQ+W
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTID-DKVVTLQIW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+D+T +F+++ W+ + + + D P V+
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEFPFVV 124
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
+ NK D + K ++ A+ + + + FETSAKD++N++ A + ++ L+N+
Sbjct: 125 VGNKLDMEAKRKVSK--ARATTWCRSKDNIPCFETSAKDSLNVEQAFIEIARRALQNEAA 182
Query: 633 QANGDSHATSEAVFSLNR--NSQETKNGRNCAC 663
A +LN ++ N + C C
Sbjct: 183 MAKEQEQMYLSQTLNLNNPPADNQSSNVQQCEC 215
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|452820726|gb|EME27765.1| Rab family, other [Galdieria sulphuraria]
Length = 208
Score = 119 bits (299), Expect = 4e-24, Method: Composition-based stats.
Identities = 73/212 (34%), Positives = 127/212 (59%), Gaps = 20/212 (9%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F K++ D +TI +LQ+WD A
Sbjct: 5 YLFKFIIIGDSGVGKSCLLLQFTDKRFQPIHDLTIGVEFGAKIVQMDGKTI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE F ++TR YY+ A GA +V+D+TR TF+ + W +D + + PD + VL+ N
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDA-RQYSSPD---MTVVLVGN 119
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID----DAAKTLVQKILENDK 631
KCD + + ++ + F + H S + ETSAK +++ +AA+T+ +KI + K
Sbjct: 120 KCDLEHRRQVSKEEG--EAFARAHGLS-FLETSAKTAFHVEETFTEAARTIYEKI-KQGK 175
Query: 632 VQANGDSH-----ATSEAVFSLNRNSQETKNG 658
+ NGD AT+ + L +N+Q+ ++G
Sbjct: 176 LDLNGDFQGVKVGATANTI-QLQQNNQDERSG 206
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D++ +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ FS + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW ++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK N NI+ A TL Q IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANTNIEKAFLTLAQDIL 171
>gi|403258075|ref|XP_003921608.1| PREDICTED: ras-related protein Rab-3B isoform 1 [Saimiri
boliviensis boliviensis]
gi|403258077|ref|XP_003921609.1| PREDICTED: ras-related protein Rab-3B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 219
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + E ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRQEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|390348772|ref|XP_001177439.2| PREDICTED: ras and EF-hand domain-containing protein-like
[Strongylocentrotus purpuratus]
Length = 398
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 358 DVTLKENTELPSAAAAASDVKSPSDLKKEILSITTPIVTEAGRK--KHNEPKPFTSPNSS 415
+V + + + SA+ A++D S D +K + +V E + +EP P +SP
Sbjct: 121 EVVRRRSVDRASASRASADRASAGDKRK---AFNRQVVGETKSSPIERSEPTPSSSPEGQ 177
Query: 416 SNGEKETAASPNTSVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSII 475
E A +P +A +K++ ++ P++ LYK++ +G+ G GKTSII
Sbjct: 178 -RAEPVGAHTPIDQAIA--------EAKKLVAANRTPER---LYKVVFVGDSGVGKTSII 225
Query: 476 KRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGA 535
R+ F+ + ATIGVDF +K LS +I+ +QLWD AGQERF ++TR Y+++A G
Sbjct: 226 HRFCTDTFTDSFSATIGVDFQVKSLSV-CGSIVAMQLWDTAGQERFRSITRHYFRKADGI 284
Query: 536 FIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD-----QPKEGIANNPA 590
I++DVT +F + W ++ DG+ + +LL NKCD Q KE + ++
Sbjct: 285 VILYDVTSETSFLNIRNWMNSIEET---TDGHVVK-MLLGNKCDCTEDRQIKEEVGHS-- 338
Query: 591 KIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--ENDKVQ 633
+ E ++E SAK N+ +A ++ + +L E++++Q
Sbjct: 339 -----LSESYKCDFYEVSAKTGSNVTEAFTSMSKLLLLKEDEEIQ 378
>gi|27806113|ref|NP_776872.1| ras-related protein Rab-3B [Bos taurus]
gi|129324|sp|P10948.1|RAB3B_BOVIN RecName: Full=Ras-related protein Rab-3B; AltName: Full=SMG P25B
gi|162762|gb|AAA30417.1| GTP-binding protein [Bos taurus]
gi|113912049|gb|AAI22724.1| RAB3B, member RAS oncogene family [Bos taurus]
gi|296489056|tpg|DAA31169.1| TPA: ras-related protein Rab-3B [Bos taurus]
Length = 219
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ D+ T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 219
>gi|328873210|gb|EGG21577.1| hypothetical protein DFA_01463 [Dictyostelium fasciculatum]
Length = 227
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+ K+LVIG +GKTSII +Y + +Y+ T+GVD K + +I L +WDIA
Sbjct: 21 IMIKLLVIGPPRSGKTSIINKYCNNINPTNYKITVGVDCVTKETTISGRKVI-LMIWDIA 79
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAA-TFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
GQER+ +MTR+YY +A G FIVFD + T +WK+D+D NPIP +LLA
Sbjct: 80 GQERYAHMTRLYYSDAKGVFIVFDSSNIEPTLKVAEQWKEDVDECFA---DNPIPSILLA 136
Query: 576 NKCDQPKEGIANNPAK-IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
NK D P K D+F +E+ WF TSA ++++ + +V+ I E +
Sbjct: 137 NKGDLFPNSQQEIPYKRFDKFCEENTIDKWFLTSAMTGAGLNESVEDMVKTIFERN 192
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 16/217 (7%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FDA+ W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQANPPDPKTFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K E+ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFLCIAKTALAN 179
Query: 630 DK---VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
++ + G A SE+ E + G CAC
Sbjct: 180 EREQDIYFQGIPEAVSES---------EQRGG--CAC 205
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVLKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFNSLARDIL 170
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 110/190 (57%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLK 172
Query: 630 DKVQANGDSH 639
Q +G+ +
Sbjct: 173 SGGQRSGNGN 182
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 113/194 (58%), Gaps = 12/194 (6%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
SPY + ++++K++VIG+ GK+ I+ R+ FS ++TIGV+F + ++ D++
Sbjct: 3 SPYGDYDQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
TI + Q+WD AGQER+ +T YY+ A+GA +V+D+T+ +FD V +W ++L
Sbjct: 63 TI-KTQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHA---- 117
Query: 566 GNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKT 621
N I +L+ NKCD + + AK EF + +FETSA + IN++ A A T
Sbjct: 118 DNNIVIMLIGNKCDLRDMRAVPEEDAK--EFAQREGLF-FFETSALEAINVETAFITALT 174
Query: 622 LVQKILENDKVQAN 635
+ +I+ + AN
Sbjct: 175 EIYRIVSRKALTAN 188
>gi|440906879|gb|ELR57095.1| Ras-related protein Rab-3B, partial [Bos grunniens mutus]
Length = 225
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 9 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 58
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 59 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 117
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 118 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 171
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ D+ T ++ ++N++ + +NC+C
Sbjct: 172 AKENISVRQAFERLVDAIC--DKM---SDTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 225
>gi|348554601|ref|XP_003463114.1| PREDICTED: ras-related protein Rab-3B-like [Cavia porcellus]
Length = 219
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFIPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD +E + P + + E +FE SAK+NI++ A + LV I E
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFECLVDAICE 185
>gi|344236706|gb|EGV92809.1| Solute carrier family 45 member 3 [Cricetulus griseus]
Length = 1319
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 24/126 (19%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P R+ L+K+LV+G+ GKTS+++RY FS HY++T+G
Sbjct: 465 VPSLRDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVG------------------ 506
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
GQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G+P+P
Sbjct: 507 ------GQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGDPVP 560
Query: 571 CVLLAN 576
C+LLAN
Sbjct: 561 CLLLAN 566
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDMERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 107/178 (60%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ FS Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKSYDHLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K ++ + A ++ +EH +FETSAK ++N+++A TL + IL
Sbjct: 116 RLLLGNKCDMEVKRKVSRDQA--EKLCREHGIR-FFETSAKSSLNVEEAFNTLARDIL 170
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 107/182 (58%), Gaps = 17/182 (9%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + + +T+ +LQ
Sbjct: 3 PEYYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTV-KLQ 61
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D + C
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRFAV----EGVNC 117
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD + K+ E+ F+ + ETSAKD+ N++ A T+ ++I
Sbjct: 118 LLVGNKCDITDK-------KVVEYTVAKEFADGLGIPFLETSAKDSTNVEQAFLTMARQI 170
Query: 627 LE 628
E
Sbjct: 171 KE 172
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
++ +FL+KI++IG+ G GKT+I++R+V F + TIGV+F+ K ++ +++++ + Q+
Sbjct: 7 NEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSV-KCQI 65
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGAF+ +D+TR TF + KW ++ K P I +
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEI--KEYAPKN--IVIM 121
Query: 573 LLANKCDQPKEGIANN--PAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++ NK DQ + + + AK + + N G+ ETSA++ +N+++A LV +I
Sbjct: 122 MIGNKIDQANDRMVRSVEAAK----LCQQNKIGYIETSAQNGLNVEEAFSNLVSEIF 174
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 105/179 (58%), Gaps = 6/179 (3%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ D ++L+K++++G+ G GK++++ R+ FS ++TIGV+FA + + D +TI +
Sbjct: 12 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTI-K 70
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVT++ATF +W ++L DG
Sbjct: 71 AQIWDTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDH---ADGRGT 127
Query: 570 PCVLLANKCDQPKE--GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NK D K+ G+ P + E + ETSA D N+D A TL+ +I
Sbjct: 128 AVMLVGNKTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEI 186
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 447 PYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET 506
P S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + +
Sbjct: 1825 PVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKK 1884
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
I +LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + +
Sbjct: 1885 I-KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS---- 1939
Query: 567 NPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ +LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L +
Sbjct: 1940 AGVERLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFNSLARD 1996
Query: 626 IL 627
IL
Sbjct: 1997 IL 1998
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I
Sbjct: 40 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI- 98
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + +
Sbjct: 99 KLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----G 154
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ +LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 155 VERLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 211
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKVNINIEKAFLTLAEDIL 171
>gi|431896886|gb|ELK06150.1| Ras-related protein Rab-3B [Pteropus alecto]
Length = 219
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + P + + E +FE SAK+NI++ A + LV I DK+
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAIC--DKM--- 187
Query: 636 GDSHATSEAVFSLNRNSQETKN----GRNCAC 663
DS + ++ ++N++ + +NC+C
Sbjct: 188 SDSLDSDPSMLGTSKNTRLSDTPPLLQQNCSC 219
>gi|126323469|ref|XP_001362786.1| PREDICTED: ras-related protein Rab-3A-like [Monodelphis domestica]
Length = 220
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LAEHLGFEFFEASAKDNINVKQTFERLVDIICE 185
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K + +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGGQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|326933759|ref|XP_003212967.1| PREDICTED: ras-related protein Rab-7b-like [Meleagris gallopavo]
Length = 207
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI++IG LG GKTS++ +YVH F YR T+G KV++ D +T ++LQ+WD GQE
Sbjct: 17 KIIIIGALGVGKTSLLHQYVHNTFYEDYRTTLGASILTKVVAVD-KTPLKLQIWDTGGQE 75
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+++ W+ D KV +P P V+L NK D
Sbjct: 76 RFRSMVSTFYKGSDGCMLAFDVTDRESFESLDNWRDDFLEKV-IPRDYDFPMVVLGNKID 134
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++ A + KE + +FE SAK+NIN+ A +TL ++ L
Sbjct: 135 LCDRQVSKEIAS--AWCKEKDIP-YFEVSAKNNINVAQAFETLAKQAL 179
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 111/193 (57%), Gaps = 11/193 (5%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
S + + + + D ++L+K++++G+ G GK++++ R+ FS ++TIGV+FA + +
Sbjct: 2 SGRRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTI 61
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
D +TI + Q+WD AGQER+ +T YY+ A GA +V+DVTRA TF++ +W ++L
Sbjct: 62 QVDGKTI-KAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDH 120
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGI---ANNPAKI----DEFIKEHNFSGWFETSAKDNI 613
DG +L+ NK D + G ++P + + E + ETSA D
Sbjct: 121 ---ADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDAT 177
Query: 614 NIDDAAKTLVQKI 626
N+D A +TL+ +I
Sbjct: 178 NVDAAFETLLTEI 190
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A + +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQREQA--ERLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL 170
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW + +D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRHIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 124/223 (55%), Gaps = 22/223 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + E +YK+++IGE G GK++++ R+ F P + TIGV+FA + + ++ +TI R
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTI-RA 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDG 566
Q+WD AGQE++ +T YY+ A GA V+DV++ +FDA+ +W +L D+ +T+
Sbjct: 60 QIWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITI--- 116
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D +E N EF ++H+ + + ETSA + N++ A L+ +I
Sbjct: 117 -----MIVGNKADLKQEREVNTSDGT-EFAQKHS-AFFIETSALEGTNVEKAFSDLLIQI 169
Query: 627 -------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
L+ND V ++ T E V S +T+ G+ C
Sbjct: 170 YKKKNATLKNDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 119 bits (297), Expect = 7e-24, Method: Composition-based stats.
Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + N + + +EH + ETSAK NINI+ A L + IL+ + +
Sbjct: 122 NKCDMTDKRVVNK-ERGEAIAREHGIR-FMETSAKSNINIERAFCELAEAILD----KTS 175
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
G A ++ ++R +QE G + C
Sbjct: 176 GRESAENQERVIIDRRNQEKAPGYSKCC 203
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|327278641|ref|XP_003224069.1| PREDICTED: ras-related protein Rab-7b-like [Anolis carolinensis]
Length = 200
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KI++IG LG GKTS++ +YVH+ F YR T+G K+++ D T ++LQ+WD GQE
Sbjct: 10 KIIIIGALGVGKTSLLHQYVHKKFYEDYRTTLGASILTKMVAVDR-TPLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+ + W++D KV +P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCMLAFDVTDMDSFECLEDWREDFLQKV-IPTEQGFPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
++ A + + KE + + +FE SAK++IN+ +A TL ++ L K
Sbjct: 128 LNDRQVSKETASL--WCKEKDIA-YFEVSAKNDINVVNAFDTLARQALSRYK 176
>gi|311259329|ref|XP_003128025.1| PREDICTED: ras-related protein Rab-3B-like [Sus scrofa]
Length = 219
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + E ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRQEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ D+ T +V ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDTLDTDPSVLGTSKNTRLSDTPPLLQQNCSC 219
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|301759907|ref|XP_002915768.1| PREDICTED: ras-related protein Rab-3B-like [Ailuropoda melanoleuca]
gi|281353546|gb|EFB29130.1| hypothetical protein PANDA_003782 [Ailuropoda melanoleuca]
Length = 219
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD +E + P + + E +FE SAK+NI++ A + LV I +
Sbjct: 135 NKCDMEEERVV--PTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 124/223 (55%), Gaps = 22/223 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + E +YK+++IGE G GK++++ R+ F P + TIGV+FA + + ++ +TI R
Sbjct: 1 MEGETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTI-RA 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDG 566
Q+WD AGQE++ +T YY+ A GA V+DV++ +FDA+ +W +L D+ +T+
Sbjct: 60 QIWDTAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITI--- 116
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D +E N EF ++H+ + + ETSA D N++ A L+ +I
Sbjct: 117 -----MIVGNKADLKQEREVNTSDGT-EFAQKHS-AFFIETSALDGTNVEKAFSDLLIQI 169
Query: 627 -------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
L++D V ++ T E V S +T+ G+ C
Sbjct: 170 YKKKNATLKSDSVPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|149058661|gb|EDM09818.1| similar to RAB7-like protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 208
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 7/195 (3%)
Query: 445 VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH 504
VSP + M +++ K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D
Sbjct: 4 VSPQALMNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD- 62
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
+T ++LQ+WD GQERF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P
Sbjct: 63 DTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-VP 121
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
P V+L NK D + A E+ KE + +FE SAK++IN+ A + L
Sbjct: 122 MEQSYPMVVLGNKIDLEDRKVPQEVAH--EWCKEKDMP-YFEVSAKNDINVVQAFEVLAS 178
Query: 625 KILENDKVQANGDSH 639
+ L + Q ++H
Sbjct: 179 RALL--RYQGIAENH 191
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRQVQREQA--EKLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL 170
>gi|66811460|ref|XP_639910.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897037|sp|Q54P07.1|RB32D_DICDI RecName: Full=Ras-related protein Rab-32D
gi|60466945|gb|EAL64989.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 228
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG++ GKTSI+ R + F+ Y++TIG DF K + ++ I +QLWD AGQE
Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTF-YQNDIITHIQLWDTAGQE 69
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLANK 577
++ +T +++ + +VFD++ ++F + W + +K PDG +P +LLANK
Sbjct: 70 KYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLANK 129
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
D + + ++I+++ +H + ++E SAK +INI ++ LV+ I+E DK
Sbjct: 130 SDSLTRAV--DQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDK 181
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|344278706|ref|XP_003411134.1| PREDICTED: ras-related protein Rab-3B-like [Loxodonta africana]
Length = 219
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKGGIKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + +E ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRNEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGKILAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKMS---DSLDTDPSVLGASKNTRLSDTPPLLQQNCSC 219
>gi|118151120|ref|NP_001071481.1| ras-related protein Rab-7b [Bos taurus]
gi|122132235|sp|Q08DE8.1|RAB7B_BOVIN RecName: Full=Ras-related protein Rab-7b
gi|115305016|gb|AAI23790.1| RAB7B, member RAS oncogene family [Bos taurus]
gi|296479391|tpg|DAA21506.1| TPA: ras-related protein Rab-7b [Bos taurus]
Length = 200
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ RYVH+ F Y+ T+G K++ + +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILE-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAK-TIPMEQPYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 128 LEDRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRAL 172
>gi|428673102|gb|EKX74015.1| Ras-related protein rab2 small GTP-binding protein [Babesia equi]
Length = 215
Score = 118 bits (296), Expect = 9e-24, Method: Composition-based stats.
Identities = 64/177 (36%), Positives = 108/177 (61%), Gaps = 10/177 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ R+ + F P + TIGV+F + ++ D E I +LQ+WD
Sbjct: 5 KYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVDGEQI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +VFD++R +TFD + KW +++ +G+P + +L+
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFDHLTKWLEEVR-----DNGSPTMTIILI 118
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NK D + + K +F ++N + ETSAK + N++ A T + I EN K
Sbjct: 119 GNKTDVATREVEYHEGK--KFADQNNLI-YMETSAKGDYNVEAAFLTTAEMIYENVK 172
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L K++++GE G GKTSI+ +YV++ FS Y+ATIG DF K + D + ++ L
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +F+ + W+ + + + + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D ++ + +K F + +FETSAK+ IN+ +A +T+ + LEN
Sbjct: 120 FILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 108/181 (59%), Gaps = 9/181 (4%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ G GK+ I+ RY FS +ATIGV+F + L DH+++
Sbjct: 6 YGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSV 65
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+DVTR TFD + +W ++L D N
Sbjct: 66 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGH---ADKN 121
Query: 568 PIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + + I+ AK EF + + ETSA + +N++ A T++ +I
Sbjct: 122 -IVIILVGNKSDLEDQRAISTEDAK--EFAETEGLF-FLETSALNAVNVETAFSTVLTEI 177
Query: 627 L 627
Sbjct: 178 F 178
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 118 bits (296), Expect = 9e-24, Method: Composition-based stats.
Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 7/181 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + H I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVEL-HGKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + KW +++D + +L+
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNIDEHAN----EDVERMLIG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + I + + KEH +FETSAK NINI+ A TL + IL + +
Sbjct: 122 NKCDMEDKRIVGTD-RGENIAKEHGIR-FFETSAKANINIEKAFMTLAEDILRKTPSKDS 179
Query: 636 G 636
G
Sbjct: 180 G 180
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRQVQREQA--EKLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL 170
>gi|378726191|gb|EHY52650.1| Ras-like protein Rab7 [Exophiala dermatitidis NIH/UT8656]
Length = 205
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K ++ D + I+ L
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTVD-DRIVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV A +F+ + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPESFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D +E + + + ++ +FETSAK++IN++ A + + + L +
Sbjct: 120 FVVIGNKIDLGEERRMISQKRALAYCQQRGQMPYFETSAKESINVEQAFEVIARNALAQE 179
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + G + +N N + ++G CAC
Sbjct: 180 ESEEYGGDFSD-----PININLDQERDG--CAC 205
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 118 bits (296), Expect = 1e-23, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 10/214 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K +++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALAN 179
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ Q + EAV ET+ G CAC
Sbjct: 180 EHEQ-DIYFQGIPEAV-------SETEQGGGCAC 205
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|5738168|gb|AAD50281.1|AF169951_1 putative intermediate compartment protein [Tetrahymena thermophila]
Length = 211
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 107/173 (61%), Gaps = 9/173 (5%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ I+ +++ + F + TIGV+F +++S+D++ I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLLA 575
GQE F ++TR YYK A GA +V+D+T+ +F + KW ++ +GNP + +L+
Sbjct: 64 GQESFKSITRSYYKSAAGALLVYDITKRESFQHLGKWLEE-----ARQNGNPQMSFILVG 118
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD ++ + ++F KEH+ + E SAK N+++A K + I E
Sbjct: 119 NKCDLEQDRQVSYEEG-EKFAKEHDLV-YLEVSAKTAYNVEEAFKQTAKMIYE 169
>gi|429327079|gb|AFZ78868.1| Rab GTPase-like protein [Coptotermes formosanus]
Length = 212
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 121/190 (63%), Gaps = 18/190 (9%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KI+++G+ G G+T+++ ++V F P R+TIGV+F +K + + +++ ++Q+WD
Sbjct: 7 DYIFKIVIVGDSGVGRTNLLLQFVQGVFIPQSRSTIGVEFRVKTVEVNGKSV-KIQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T+ YY+ AV A +++D+T +++++++ KW +L DGN I +L+
Sbjct: 66 AGQERYRAITKNYYRGAVVALLLYDITSSSSYNSLQKWIDELKMH---ADGNVI-VMLIG 121
Query: 576 NKCDQPK-----EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL-EN 629
NKCD E A N A + F+ +FETSAK+ N+ +A LV++++ +N
Sbjct: 122 NKCDLSGQRTVLEADAQNLANDNSFL-------FFETSAKEATNVKEAFMALVRELVNQN 174
Query: 630 DKVQANGDSH 639
+ + +G+S+
Sbjct: 175 SRSRGDGESN 184
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 106/178 (59%), Gaps = 7/178 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +FL+K+L+IG+ G GKTSI+ R+ F + +TIG+DF ++++ D + I +L
Sbjct: 1 MAKSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+DVT+ ATF+ + W ++ D +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHA----AADVE 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++L NKCD E + + ++ EHN + ETSA +IN+++A TL + I E
Sbjct: 116 KMILGNKCDM-NELRQVSKERGEKLAIEHNIK-FMETSAVSSINVEEAFYTLARDIKE 171
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A + +EH +FETSAK + N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQAV--KLAREHGIR-FFETSAKSSTNVDEAFSSLARDILLK 172
Query: 630 DKVQANGDSH 639
+ +G+SH
Sbjct: 173 SGGRRSGNSH 182
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 118 bits (295), Expect = 1e-23, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 117/208 (56%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + N + + +EH + ETSAK N NI++A L Q IL+ + +
Sbjct: 122 NKCDMTDKRVVNK-ERGEAIAREHGIR-FMETSAKSNTNIEEAFCELAQAILD----KTS 175
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
G A ++ ++R + + G N C
Sbjct: 176 GRESAENQERVIIDRRNNDKAPGYNKCC 203
>gi|388511052|gb|AFK43592.1| unknown [Lotus japonicus]
Length = 205
Score = 118 bits (295), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFP 119
Query: 571 CVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+LL NK D + + D + + N +FETSAK++ N+D A ++ + L
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKANDWCVSKGNIP-YFETSAKEDYNVDAAFLSIAKTALA 178
Query: 629 NDKVQ 633
D+ Q
Sbjct: 179 TDREQ 183
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 19/226 (8%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN 122
Query: 568 PIPCVLLANKCDQPKE-GIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
I +L+ NKCD + + AK EF KE F + ETSA + N++ A T++ +
Sbjct: 123 -IVIILIGNKCDLVNQRDVPTEDAK--EFAEKEGLF--FLETSALEATNVESAFTTVLTE 177
Query: 626 I--------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
I L D+ Q NG+S + S + +QE RN C
Sbjct: 178 IYNIVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCC 223
>gi|431922009|gb|ELK19182.1| cAMP-specific 3',5'-cyclic phosphodiesterase 4C [Pteropus alecto]
Length = 900
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 700 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 758
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 759 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 814
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + ++ + +H +FE SAKDNIN+ + LV I E +
Sbjct: 815 NKCDMEDERVVS--SERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLD 872
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
A + A Q+ ++CAC
Sbjct: 873 TADPAVTGAKQGPQLTDQQAPPHQDCAC 900
>gi|449279549|gb|EMC87121.1| Ras-related protein Rab-3A, partial [Columba livia]
Length = 214
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSEKGRQ--LAEHLGFEFFEASAKDNINVKQTFERLVDIICE 185
>gi|393911053|gb|EFO27043.2| small GTP binding protein, partial [Loa loa]
Length = 236
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 116/204 (56%), Gaps = 14/204 (6%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREF--LYKILVIGELGAGKTSIIKRYVHQFFSPH 486
++ +G+ + G +E S P R++ L+K+L+IG+ G GK+S++ R+ FSP+
Sbjct: 9 NLFSGEKRYSIGKREESISMSVAPGPRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSPN 68
Query: 487 YRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAAT 546
Y TIGVDF ++ ++ + + + +LQ+WD AGQERF +T YY+ G +V++VT +
Sbjct: 69 YITTIGVDFKIRTVTINGQRV-KLQIWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDS 127
Query: 547 FDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIA--NNPAKIDEFIKEHNFSGW 604
F V +W ++D + VL+ NK D P+ + + + E +K +
Sbjct: 128 FSNVKRWLHEIDTNC-----ENVQKVLVGNKADDPERRVVLEVDARRFAETMK----IPF 178
Query: 605 FETSAKDNINIDDAAKTLVQKILE 628
FETSAK+NIN+++ + + +LE
Sbjct: 179 FETSAKENINVEEMFNCITRLVLE 202
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P++R + Y ++IG+ G GKT+I+ RY F ++T+GV+FA K ++ D++TI + Q
Sbjct: 6 PEER-YDYLFVLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTI-KAQ 63
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQER+ +T YY+ AVGA +V+D+T +TFD + W +L N +
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHY----SDNDMTI 119
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
VL+ NKCD + + + +F ++HN + + ETSA D+ ID A +T++ I
Sbjct: 120 VLVGNKCDLANLRVIESQEAV-QFAEQHNIA-FIETSAYDSTGIDKAFETILSGI 172
>gi|156378540|ref|XP_001631200.1| predicted protein [Nematostella vectensis]
gi|156218236|gb|EDO39137.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 118 bits (295), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 7/169 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+KIL+IG+ G GKT I+ R+ + F+ + +TIG+DF +K L D + I R+
Sbjct: 1 MAKSYDHLFKILLIGDSGVGKTCILCRFANDEFNKSHISTIGIDFKMKTLMVDGKRI-RI 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T YY+ A G +V+D+TR TF + KW + +D + +
Sbjct: 60 QMWDTAGQERYETITTQYYRRAQGIILVYDITRLDTFQNIRKWLRYVDEHAS----TNVQ 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
+LL NKCD ++ I + + E N ++ETSA N NIDD +
Sbjct: 116 TLLLGNKCDIEQQRIVGKELGV-KLASERNIH-FYETSAYSNTNIDDVS 162
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 113/221 (51%), Gaps = 25/221 (11%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ RYVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNRYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQANPPDPKTFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW--------FETSAKDNINIDDAAKTL 622
+LL NK D I +++ + E W FETSAK++IN+D A
Sbjct: 120 FILLGNKID-----IDGGNSRV---VSEKKAKEWCSSKGIPYFETSAKEDINVDAAFLFY 171
Query: 623 VQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ L N+ Q + EAV ET+ CAC
Sbjct: 172 CKTRLANEHRQ-DIYFQGIPEAV-------SETEQRSGCAC 204
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 111/193 (57%), Gaps = 11/193 (5%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
S + + + + D ++L+K++++G+ G GK++++ R+ FS ++TIGV+FA + +
Sbjct: 2 SGRRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTI 61
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
D +TI + Q+WD AGQER+ +T YY+ A GA +V+DVTRA TF++ +W ++L
Sbjct: 62 QVDGKTI-KAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDH 120
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGI---ANNPAKI----DEFIKEHNFSGWFETSAKDNI 613
DG +L+ NK D + G ++P + + E + ETSA D
Sbjct: 121 ---ADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDAT 177
Query: 614 NIDDAAKTLVQKI 626
N+D A +TL+ +I
Sbjct: 178 NVDAAFETLLTEI 190
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 117 bits (294), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/178 (37%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + K ++ KEH +FETSAK NINI+ A TL + IL V+
Sbjct: 122 NKCDMEDKRVVLK-TKGEQIAKEHGIR-FFETSAKANINIEKAFLTLAEDILRKTPVK 177
>gi|147901693|ref|NP_001088531.1| RAB3A, member RAS oncogene family [Xenopus laevis]
gi|54311426|gb|AAH84880.1| Rab3a-prov protein [Xenopus laevis]
Length = 220
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 117/212 (55%), Gaps = 15/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E K+ +
Sbjct: 135 NKCDMEDERVVSSERGRQ--LAEHLGFEFFEASAKDNINVKQTFERLVDIICE--KMSES 190
Query: 636 GDSHATSEAVFSLNRNSQETKNG----RNCAC 663
D+ AV + Q T G ++CAC
Sbjct: 191 LDT--ADPAVTGAKQGPQLTDQGAPPHQDCAC 220
>gi|196011170|ref|XP_002115449.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
gi|190582220|gb|EDV22294.1| hypothetical protein TRIADDRAFT_29154 [Trichoplax adhaerens]
Length = 222
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 105/176 (59%), Gaps = 13/176 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 23 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-FRNDKRVKLQIWDT 81
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + VL+
Sbjct: 82 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWSTQIKTYSWDNAQVVLVG 137
Query: 576 NKCDQPKEGIANNPAKID---EFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD+ E + + ID + + F +FETSAKDNIN+ +TLV I E
Sbjct: 138 NKCDREDERVVS----IDRGKQLADQLGFP-FFETSAKDNINVKSTFETLVDIICE 188
>gi|254574478|ref|XP_002494348.1| GTP-binding protein [Komagataella pastoris GS115]
gi|238034147|emb|CAY72169.1| GTP-binding protein [Komagataella pastoris GS115]
gi|328353835|emb|CCA40232.1| Ras-related protein Rab-7A [Komagataella pastoris CBS 7435]
Length = 205
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 109/189 (57%), Gaps = 1/189 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ + K++++G+ G GKTS+++++V++ FS Y+ATIG DF K L D++ + +
Sbjct: 1 MSSKKKTILKVIILGDSGVGKTSLMQQFVNRKFSQQYKATIGADFLTKELVIDNKNV-TI 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DVT ++D V+ WK + + + + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSYDNVVSWKDEFLVQANIKNPETFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D + N K + + +FETSAK+ +NID A + + L+ +
Sbjct: 120 FILIGNKIDVEENKRQINNKKAQQLCAQLGNIPYFETSAKEAVNIDQAFDVVARNALQQE 179
Query: 631 KVQANGDSH 639
+ GD +
Sbjct: 180 ESLDFGDDY 188
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW ++++ + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNINEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + ++ + +EHN S + ETSAK NINI+ A L IL
Sbjct: 122 NKCDMDDKRVV-GKSRGEGIAREHNIS-FLETSAKANINIEKAFTDLTLSIL 171
>gi|347966247|ref|XP_321482.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|347966249|ref|XP_001689335.2| AGAP001617-PB [Anopheles gambiae str. PEST]
gi|333470146|gb|EAA00927.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|333470147|gb|EDO63240.2| AGAP001617-PB [Anopheles gambiae str. PEST]
Length = 207
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++V+G+ GKTS++ +YV++ FS Y+ATIG DF K + D E ++ +
Sbjct: 1 MATRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVID-ERVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D T TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ A+ ++ + N +FETSAK+ IN+D A +T+ + +
Sbjct: 120 FVVLGNKIDLENRAVSTKRAQ--QWCQTKNDIPYFETSAKEGINVDLAFQTIAKNAIAQ- 176
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ D + LN +NG NC+C
Sbjct: 177 --ETEVDLYNDFPDQIKLNTRDSRPRNGDNCSC 207
>gi|363750286|ref|XP_003645360.1| hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888994|gb|AET38543.1| Hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 121/215 (56%), Gaps = 9/215 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K ++ D + + +
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT + +F+ + W+ + +P P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKAWRDEFLVHANVPSPETFP 120
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D + K+ + ++ E K +F TSAK+ IN+DDA + + + L+
Sbjct: 121 FVILGNKIDVEESKKVVTTRSSQ--ELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQ 178
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ QA+ D++ E F+ N Q +C+C
Sbjct: 179 --QSQADADAY---EDDFNDAINIQLDGEPSSCSC 208
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++GE G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F A+ W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V++ NK D G++ A+ + + N +FETSAK+ +N++ A +T+ + L
Sbjct: 120 FVVIGNKVDLDNRGVSTKRAQ--GWCQSKNGIPYFETSAKEALNVEQAFQTVAKNAL 174
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 449 SKMP--DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPH--YRATIGVDFALKVLSWDH 504
S MP D ++++K+LVIG+ GKT++I + SP+ Y+ TIG+DF +K + +
Sbjct: 19 SWMPSGDVYDYIFKVLVIGDSYVGKTALITIFSTGRASPYRDYQTTIGIDFKIKTVELNG 78
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
+ I +LQ+WD AGQERF +T YY+ A+G +V+D+T+ TFD + KW +++
Sbjct: 79 KKI-KLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHAN-- 135
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
+ +LL NKCD + + N E I + N + ETSAK NIN++ A TL
Sbjct: 136 --EDVEKMLLGNKCDMDDKRMINKDR--GETIAKENGIKFMETSAKANINVEQAFMTLAA 191
Query: 625 KILE 628
IL+
Sbjct: 192 DILK 195
>gi|62858351|ref|NP_001016426.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273837|emb|CAJ83688.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89273838|emb|CAJ83689.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134024095|gb|AAI35627.1| RAB3A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 220
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LAEHLGFEFFEASAKDNINVKQTFERLVDIICE 185
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 12/205 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI+VIG+ G GK+S++ R+ +S Y +TIGVDF +K + D+ T I+LQ+WD
Sbjct: 5 DYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTT-IKLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCVLL 574
AGQERF +T YY+ A G V+DVT +FD + + W QD+D T + + +L+
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYAT----SNVCKLLI 119
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEND 630
NK D + + + + + E N + E SAK + N++ A AK L ++ +
Sbjct: 120 GNKIDLAENRVVSTEEA--KHVAEQNNMNYIEASAKTDSNVEKAFITIAKALKDRVTQYP 177
Query: 631 KVQANGDSHATSEAVFSLNRNSQET 655
A + + A S NRN ET
Sbjct: 178 SNNAPSTVNLNTSAKISTNRNVSET 202
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 117 bits (294), Expect = 2e-23, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F + +TIG+DF +K + H I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIEL-HGKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW + +D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAKWLRYIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + + K + ++HN S + ETSAK NINI++A L + IL+
Sbjct: 122 NKCDMELKRVISKD-KGEAIARDHNIS-FLETSAKANINIEEAFTQLAEAILQ 172
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 108/177 (61%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV +TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLENRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|149428156|ref|XP_001511148.1| PREDICTED: ras-related protein Rab-3A, partial [Ornithorhynchus
anatinus]
Length = 223
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 23 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 81
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 82 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 137
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E
Sbjct: 138 NKCDMEDERVVSSERGRQ--LAEHLGFEFFEASAKDNINVKQTFERLVDIICE 188
>gi|432854572|ref|XP_004067967.1| PREDICTED: ras-related protein Rab-3A-like [Oryzias latipes]
Length = 219
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + A + EH +FE SAKDNIN+ + LV I E
Sbjct: 134 NKCDMEDERVVS--ADRGRQLSEHLGFEFFEASAKDNINVKQTFERLVDIICE 184
>gi|328869838|gb|EGG18213.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 200
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 16/192 (8%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
S ++ +PYS L+K +++G+ GK++++ ++V + FSP+ TIGV+F + +
Sbjct: 16 SDRKANPYSH-------LFKYIMVGDSAVGKSNLLLQFVDKRFSPNSDFTIGVEFGSRSI 68
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+ D+ + +LQ+WD AGQE+F ++TR YY+ AVGA IV+D+TR TF+ + W D K
Sbjct: 69 NIDNNQV-KLQIWDTAGQEKFRSITRAYYRGAVGALIVYDITRRETFEGLANWLTDC-RK 126
Query: 561 VTLPDGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
+ D + VL+ NKCD + ++ A+ F EH +FETSAK N+D+A
Sbjct: 127 YSSTD---VTIVLVGNKCDLEASRQVS--YAEASSFANEHGLL-FFETSAKTGSNVDEAF 180
Query: 620 KTLVQKILENDK 631
+ + I E K
Sbjct: 181 EQTAKIIFERTK 192
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKE 171
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ A+ ++ + N +FETSAK+ +N++ A +T+ + L +
Sbjct: 120 FVILGNKVDLENRAVSAKRAQ--QWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 177
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+A + + + N N + ++G NCAC
Sbjct: 178 -TEAELYNEFPDQIKLNANDNGR-NRDGDNCAC 208
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 117/208 (56%), Gaps = 16/208 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A G +V+D+T +F+ + KW ++++ + + +LL
Sbjct: 66 AGQERFHTITTSYYRGANGIMLVYDITNTKSFENISKWLRNIEEHAS----EDVEKMLLG 121
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + K I+ ++ KEH ++ETSAK+NINI+ A L IL V+
Sbjct: 122 NKCDMEDKRMISKERGEM--IAKEHGIK-FYETSAKNNINIETAFIALATDILHKTPVKE 178
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
G A + +Q+ ++ R+C
Sbjct: 179 TGAGSAGVDV-------TQQRQSSRSCC 199
>gi|296005155|ref|XP_002808912.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
gi|13509187|emb|CAB92946.2| putative Rab7 GTPase [Plasmodium falciparum 3D7]
gi|225631795|emb|CAX64193.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
Length = 206
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 6/212 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +K+ + K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K D+E I +
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEQI-TM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFD+T T++++ WK + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D+ + K+ ++ K +N +FETSAK+ IN+D A + +K ++
Sbjct: 120 FVIIGNKVDETNKRKV-QSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMK-- 176
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
Q + + F+LN S++ C
Sbjct: 177 --QEHQEEQIYLPETFALNNQSEQKMYKSRCC 206
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 118/191 (61%), Gaps = 12/191 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K+L+IG+ G GK+ ++ R+ F+P + TIG+DF ++ + + + I +LQ+WD
Sbjct: 16 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI-KLQIWDT 74
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+DVT +F + W ++++ T + +L+
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT----ESVNKMLIG 130
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEN-D 630
NKCD P++ + ++ ++ EH + ETSAK++IN+++A AK + ++I++N D
Sbjct: 131 NKCDLPEKKVVDS-SRGKALADEHGIK-FLETSAKNSINVEEAFISLAKDIKKRIIDNKD 188
Query: 631 KVQANGDSHAT 641
++ +N ++ T
Sbjct: 189 ELVSNPQTNGT 199
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 107/178 (60%), Gaps = 5/178 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIR 509
M +++ L K++++GE G GKTS++ +YV++ FS Y+ATIG DF K V+ D ++
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDR--LVT 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQERF ++ +Y+ A +VFDVT A+F A+ W+ + + + D
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENF 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P V++ NK D G++ A+ + + N +FETSAK+ +N++ A +T+ + L
Sbjct: 119 PFVVIGNKVDLDNRGVSTKRAQ--GWCQSKNGIPYFETSAKEALNVEQAFQTVAKNAL 174
>gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens]
Length = 207
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 121/220 (55%), Gaps = 20/220 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF +K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLIKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 KVQANGDSHATSEAVFS-------LNRNSQETKNGRNCAC 663
T E +++ L++N + + +C+C
Sbjct: 178 ----------TEEELYNEFPEPIKLDKNDRAKASAESCSC 207
>gi|321475351|gb|EFX86314.1| hypothetical protein DAPPUDRAFT_187550 [Daphnia pulex]
Length = 216
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 114/196 (58%), Gaps = 11/196 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KI+VIG+ G GKTS+++R+ F+ Y TIGVDFA+K + + + + +LQ+WD
Sbjct: 15 DFLFKIVVIGDCGIGKTSLVQRFKSGVFTERYTNTIGVDFAMKTIVIEGKQV-KLQIWDT 73
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T+ YY+ A G +V+D+T+ ++F ++ KW +++ + T N I VL+
Sbjct: 74 AGQERFRTITQSYYRSANGVLLVYDITKRSSFLSLQKWMEEI-RRFT---ANNISWVLIG 129
Query: 576 NKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD +E + E I E ETSAKDN N++ A L ++ N
Sbjct: 130 NKCDMDTLREVEQVEALAMAELIPEIVLV--LETSAKDNTNVEQAFVELATELKRNQ--C 185
Query: 634 ANGDSHATSEAVFSLN 649
G A + VF+LN
Sbjct: 186 GLGIHDAEQQEVFNLN 201
>gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella vectensis]
gi|156221287|gb|EDO42144.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 107/177 (60%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+S++ R+ FS Y +TIGVDF ++ L+ D +T I+L
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKT-IKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +++DV + TF + +W +++ +
Sbjct: 60 QIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYAC----EGVN 115
Query: 571 CVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD + N AK EF ++ + S + ETSAKD+ N++ +T+ ++
Sbjct: 116 TILVGNKCDLIDCRQVGYNTAK--EFAEKLDIS-FIETSAKDSTNVESVFRTMAAEL 169
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 119/200 (59%), Gaps = 11/200 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D++R +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD + I P + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 126 NKCDL--DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
Query: 635 NGDSHATSEAVFSLNRNSQE 654
N DS+ +A SLNR S E
Sbjct: 184 NSDSY---KAELSLNRVSIE 200
>gi|403376123|gb|EJY88041.1| Ras-related protein RABG3b [Oxytricha trifallax]
Length = 249
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 109/176 (61%), Gaps = 5/176 (2%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ K+++IG+ G GKTS+I+ + H F+ ++ TIG DF+ K L+ D + I+ LQ+WD
Sbjct: 15 RKCFVKLVIIGDSGVGKTSLIQMFEHNKFNQSFKPTIGADFSNKELTID-DRIVTLQIWD 73
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
AGQERF ++ +Y+ A +V+DVT +F+ +L WK K + + +P ++L
Sbjct: 74 TAGQERFQSLGSAFYRGADCCVLVYDVTNPMSFENLLNWKSIFLTKSEPREPHTLPFLVL 133
Query: 575 ANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D ++ I N A+ +F K++ ++ETSAK+NIN++ A + L+ K+++
Sbjct: 134 GNKMDVDAGQKKIQENDAR--KFCKDNGDMIFYETSAKNNINVELAFQALISKVIK 187
>gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|44981445|gb|AAS51230.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|374106612|gb|AEY95521.1| FACR003Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K ++ D + + +
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT A +F+ V W+ + +P P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENVKSWRDEFLVHANVPSPESFP 120
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D + K+ + ++ E K +F TSAK+ IN+DDA + + + L+
Sbjct: 121 FVILGNKIDVEESKKVVTTRTSQ--ELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQ 178
Query: 629 NDKVQA 634
+ A
Sbjct: 179 QSQADA 184
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 122/217 (56%), Gaps = 13/217 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K ++ D++T +
Sbjct: 1 MSTRKKQILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVAIDNDTTATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD--LDAKVTLPDGNP 568
Q+WD AGQERF ++ +Y+ A +V+DVT +F+ + W+ + + A V+ P+
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSSPE--T 118
Query: 569 IPCVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
P V+L NK D K+ + A+ E K F+TSAK++IN+D A + + +
Sbjct: 119 FPFVILGNKVDTKDSKKSVTLKAAQ--ELSKSLGNIPLFQTSAKNSINVDSAFEEIARGA 176
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LE +K A+ ++A+ N Q +CAC
Sbjct: 177 LEQNKADADAYEDDFNDAI-----NIQLDGEPSSCAC 208
>gi|348523125|ref|XP_003449074.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + EH +FE SAKDNIN+ + LV I E
Sbjct: 134 NKCDMEDERVVSSERGRQ--LSEHLGFEFFEASAKDNINVKQTFERLVDIICE 184
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 122/214 (57%), Gaps = 10/214 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD K + + AK EF E N + ETSA D+ N+++A T+ ++I E+
Sbjct: 116 KLLVGNKCDLADKRVVEYDVAK--EF-AEANKMPFLETSALDSTNVEEAFLTMARQIKES 172
Query: 630 DKVQANGDSHATSEAVFSLNRNSQE-TKNGRNCA 662
Q +S ++N Q T++G +C
Sbjct: 173 MTQQNMNESQQKKNDKGNVNLKGQSLTQSGSSCC 206
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 117/198 (59%), Gaps = 11/198 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY FS H +ATIGV+F + + D + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D++R +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD + I P + + + E + ETSA D N+ A + ++++I + +
Sbjct: 126 NKCDL--DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKIL 183
Query: 635 NGDSHATSEAVFSLNRNS 652
N DS+ +A SLNR S
Sbjct: 184 NSDSY---KAELSLNRVS 198
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 108/177 (61%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQI 169
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 108/176 (61%), Gaps = 10/176 (5%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
PD +FL+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +T+ +LQ
Sbjct: 3 PD-YDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTV-KLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ A G +V+DVT +FD V +W Q++D +
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRYAC----EGVNK 116
Query: 572 VLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NK D + K+ + N AK EF ++ N + ETSAKD+ N++ A T+ + I
Sbjct: 117 LLVGNKNDLESKKSVEFNVAK--EFAEQLNIP-FLETSAKDSTNVEQAFLTMAKHI 169
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++GE G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F A+ W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V++ NK D G++ A+ + + N +FETSAK+ +N++ A +T+ + L
Sbjct: 120 FVVIGNKVDLDNRGVSTKRAQ--GWCQSKNGIPYFETSAKEALNVEQAFQTVAKNAL 174
>gi|149707819|ref|XP_001490928.1| PREDICTED: ras-related protein Rab-7b-like [Equus caballus]
Length = 200
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVLD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAK-TIPMEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL-------VQKILEN 629
+ A+ + KE + +FE SAK++IN+ A + L Q ILEN
Sbjct: 128 LADRQVPQEVAR--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRALSRYQSILEN 181
>gi|162760|gb|AAA30416.1| GTP-binding protein [Bos taurus]
Length = 220
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSSDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|145509136|ref|XP_001440512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407729|emb|CAK73115.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 117 bits (293), Expect = 2e-23, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 8/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG G GK+ ++ R+ F H+ TIGVDF +KV D T+ +LQ+WD
Sbjct: 10 DYLFKVLLIGNSGVGKSCMLMRFSENQFRNHFYNTIGVDFKIKVFQIDRSTV-KLQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQ+RF +T YY+ A G IVFDVT +F+ + +W Q++D K N I L+
Sbjct: 69 AGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQWIQEID-KFAAESVNKI---LVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D + ++ + A + K +N S + ETSAK NINI++ + ++I++
Sbjct: 125 NKIDSSQRRVSTDEA--EALAKSYNIS-YIETSAKTNINIENCFSLITRQIIQ 174
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D + +++LQ+
Sbjct: 6 DQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK-VVKLQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +T YY+ A G + +DVT +F+ V +W Q++D + + N +
Sbjct: 65 WDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEID-RYACENVNKL--- 120
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NKCD + + ++ EF K+ + + ETSAKD+ N++ A K + + I+
Sbjct: 121 LVGNKCDLTTKKVVDHSTAA-EFAKQLDIP-FLETSAKDSTNVEQAFKKMAEDIM 173
>gi|449494061|ref|XP_004175277.1| PREDICTED: ras-related protein Rab-10-like [Taeniopygia guttata]
Length = 206
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 116/210 (55%), Gaps = 20/210 (9%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSP--HYRATIGVDFALKVLSWDHETIIRLQL 512
R L KI++ GE GKTSI++RY SP Y ATIG+DF +K + ++ + +LQ+
Sbjct: 13 RPLLVKIVMAGESCVGKTSIVRRYTEPGGSPAPSYMATIGIDFKVKPVMFNDRRV-KLQI 71
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++ Y++ A G +V+D+T +F ++ W D+ K G+ + +
Sbjct: 72 WDTAGQERFHTLSTSYFRGAQGFVLVYDITNLKSFQSITMWMNDIYEKA----GDEVDVI 127
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
LL NKCD+ E + P + E + +FETSAK+N+NI+ A L ++ILE
Sbjct: 128 LLGNKCDKESERVV--PKQKGEKLAWEFGMPFFETSAKENVNIEYAFSVLTKEILE---- 181
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCA 662
+ +G H V SLN ETK R C
Sbjct: 182 KKSGVLHDLD--VVSLN----ETKK-RTCC 204
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 107/177 (60%), Gaps = 17/177 (9%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ LYK++VIG+ G GK+++I R+ F+ + TIGV+F K + +D TI + Q+WD
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTI-KGQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF ++ YY+ A GA IV+D+T +FD + KW ++++ + N +L+
Sbjct: 63 AGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGE----NGCINILVG 118
Query: 576 NKCDQPKEGIANNPAKID-----EFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD N+ +++ F ++HN S + ETSA D+ N+D+A TL+++I
Sbjct: 119 NKCD------LNHLRQVETATGRAFAEKHNVS-FMETSALDSTNVDEAFTTLLKEIY 168
>gi|307197094|gb|EFN78462.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 760
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LV+G+ GKT I+ RY + + Y +TIG+DF K+++ D T I+LQ+WD AGQ
Sbjct: 9 YKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKIINLDG-TPIKLQIWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +++DVT +F+ + W +++ + PD + VL ANKC
Sbjct: 68 ERFRTLTTAYYRGAMGILLMYDVTSLESFNHLSYWLRNIQENAS-PD---VVKVLAANKC 123
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
D + A+ + I E+ +FE S K+NINI++A TL
Sbjct: 124 DATAHRAVD--AERGQKIAENFDMPFFEVSCKENINIEEAFLTL 165
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 118/198 (59%), Gaps = 11/198 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+ H +ATIGV+F + + D + + + Q+WD
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEV-KAQIWDT 71
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D++R TFD V +W Q+L+ T D + +L+
Sbjct: 72 AGQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELN---THSD-TTVAKMLVG 127
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD + I P + + + E + ETSA D+ N++ A + ++++I + +
Sbjct: 128 NKCDL--DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKIL 185
Query: 635 NGDSHATSEAVFSLNRNS 652
N DS+ +A SLNR S
Sbjct: 186 NSDSY---KAELSLNRVS 200
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 110/179 (61%), Gaps = 11/179 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ LYK+++IG+ G GKT+I+ ++ F + TIGV+FA K + D +TI + Q+WD
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTI-KAQIWDT 67
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQER+ +T YY+ AVGA I++D+T++ TF+ V KW ++L + +P + +++
Sbjct: 68 AGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELK-----ENADPSLQIMIV 122
Query: 575 ANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NK DQ +A + A + N + ETSAKD N++DA K ++Q+I ++ KV
Sbjct: 123 GNKTDQKHIRQVATDCAIA---YAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKV 178
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 117 bits (292), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +FD + KW +++D + + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVEKMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + ++ +H + ETSAK NI ID A L + IL+ ++
Sbjct: 122 NKCDMAERRVVSR-ERGEKIANDHGIR-FLETSAKANIQIDKAFYDLAEAILDKMPIKNE 179
Query: 636 GDSHAT 641
G T
Sbjct: 180 GMKQPT 185
>gi|449444034|ref|XP_004139780.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449502892|ref|XP_004161772.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 205
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSFRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W + + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K E+ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|298706252|emb|CBJ29277.1| Rab32L, RAB family GTPase [Ectocarpus siliculosus]
Length = 297
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K + +G+ GKT+I+ R+ F P Y+ T+ VDF + E +R+ LW ++
Sbjct: 65 MVKFMFLGDSECGKTAIVTRFATGTFDPVYKPTMDVDFTQSNVMVG-EQRLRVALWQVS- 122
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
+++ G++ ++ GAFIV D+ R TF V K++Q +D K+ +P VLLANK
Sbjct: 123 EKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANK 182
Query: 578 CDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANG 636
D+ E G++ N + +D+ K H GW+ TSAKDN NID A K ++++ L+ A G
Sbjct: 183 SDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNSNIDLAIKEVLRRALQGSARSAFG 242
Query: 637 -----DSHATSEAVFSLN 649
D A E + LN
Sbjct: 243 ELEQDDVDALDEELTQLN 260
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 9/213 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ A+ + + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLDNRQVSTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
V D + + + L N + NG C+C
Sbjct: 178 SV----DKYDFPDEI-KLG-NDRPMSNGEGCSC 204
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 29/187 (15%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++LYK+++IG+ G GK++++ R+ F P ++TIGV+F+ K + ++ ET+ R Q+
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETV-RTQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDGNP 568
WD AGQER+ +T YY+ A+GA +V+DVT+ ++F+++ +W +L D KV
Sbjct: 63 WDTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVE----- 117
Query: 569 IPCVLLANKCDQP-------KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+++ NKCD KEG + KI F +FETSA D N++ A
Sbjct: 118 ---MIVGNKCDLEQMREVTIKEG-EDMAKKIGAF--------FFETSALDGKNVETAFMA 165
Query: 622 LVQKILE 628
++QKI +
Sbjct: 166 IIQKICD 172
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----SAVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD K + + AK EF + +N + ETSA D+ N+++A T+ ++I E+
Sbjct: 116 KLLVGNKCDLDGKRMVEYDVAK--EFAESNNMP-FLETSALDSTNVEEAFLTMARQIKES 172
Query: 630 ---DKVQANGDSHATSEAV---FSLNRNSQETKNGRNCAC 663
K+Q +++A S ++N N Q N N C
Sbjct: 173 FAQQKIQDGSNANANSNLQNDKSNVNLNGQSLTNATNNCC 212
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--NKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 29/187 (15%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D ++LYK+++IG+ G GK++++ R+ F P ++TIGV+F+ K + ++ ET+ R Q+
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETV-RTQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL----DAKVTLPDGNP 568
WD AGQER+ +T YY+ A+GA +V+DVT+ ++F+++ +W +L D KV
Sbjct: 63 WDTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVE----- 117
Query: 569 IPCVLLANKCD-------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+++ NKCD KEG + KI F +FETSA D N++ A
Sbjct: 118 ---MIVGNKCDLEQMREVSIKEG-EDMAKKIGAF--------FFETSAFDGKNVETAFMA 165
Query: 622 LVQKILE 628
++QKI +
Sbjct: 166 IIQKICD 172
>gi|403366463|gb|EJY83034.1| Rab7, putative [Oxytricha trifallax]
Length = 219
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 111/182 (60%), Gaps = 5/182 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K+ FL KI+++G+ G GKT+++++YV +PH + TIG DF+ K L D+ T++ L
Sbjct: 1 MSKKKNFL-KIVILGDSGVGKTTLLQQYVSGKSNPHSKPTIGADFSKKELMIDN-TVVTL 58
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQE+F ++ +Y+ A +V+D+T +FD + KW+ PD N P
Sbjct: 59 QIWDTAGQEKFQSLGYAFYRGADCCALVYDITNQKSFDDLNKWRDGFIEHAAPPDPNTFP 118
Query: 571 CVLLANKCDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
V++ NK D+ E + + A+ + KE+ ++ETSAK+NI++DDA + + ++
Sbjct: 119 FVVIGNKLDRESERRVKTSDAQ--AWSKENGDITYYETSAKENISVDDAFIEMAKMAIKR 176
Query: 630 DK 631
D+
Sbjct: 177 DQ 178
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 104/173 (60%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T TFD ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD ++ + + + + +EH + ETSAK NINID A L + IL+
Sbjct: 122 NKCDMEEKRVVSK-ERGEAIAREHGIR-FMETSAKANINIDRAFSELAEAILD 172
>gi|402469023|gb|EJW04091.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 205
Score = 117 bits (292), Expect = 3e-23, Method: Composition-based stats.
Identities = 76/213 (35%), Positives = 112/213 (52%), Gaps = 10/213 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+KI++IG G GKTS++ RY+ + +Y +TIGVDF +K L + +I+L
Sbjct: 1 METEYTHLFKIILIGNSGVGKTSLLNRYIDNTYHGNYISTIGVDFKIKTLKVSSD-LIKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IVFD+T +F V +W ++ A+ +
Sbjct: 60 QIWDTAGQERFRTITSAYYRGAHGIIIVFDMTDLDSFTKVTEWLDEIKARAN----EKVE 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNF--SGWFETSAKDNINIDDAAKTLVQKILE 628
L+ NK D K+ I I+ F KEHN S + E SAKD +D+ L K+ +
Sbjct: 116 IYLIGNKIDL-KDEICVQKEDIEAFKKEHNIADSNFMEVSAKDGYQVDELFFKLADKLAK 174
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+K A G + + F LN + K C
Sbjct: 175 REK--AEGPIVSKDKEAFKLNCKDDDNKKFGCC 205
>gi|47217560|emb|CAG02487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%)
Query: 447 PYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET 506
P + M ++L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E
Sbjct: 2 PATGMARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEK 61
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
+ +LQ+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ +
Sbjct: 62 V-KLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNC 115
Query: 567 NPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ + +L+ NK D P + +F ++ + FETSAK+NIN+++ + + +
Sbjct: 116 DDVCRILVGNKNDDPNSKVV-ETTDAQKFAEQMGIN-LFETSAKENINVEEMFNCITELV 173
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETK 656
L K V L RNS+ K
Sbjct: 174 LRAKKEVLAKQQQQQQNDVVKLTRNSKRKK 203
>gi|328874039|gb|EGG22405.1| G-protein-coupled receptor family 3 protein 5 [Dictyostelium
fasciculatum]
Length = 1002
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K+LVIG+ GK+SI+ RY F +Y+ TIGVD K L D + ++ L L+D+AGQ
Sbjct: 47 FKLLVIGDPACGKSSIVNRYCLNSFESNYKITIGVDSLTKHLRVDGK-MVSLLLFDVAGQ 105
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAA-TFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
ERF +M R Y++ A A IV D TR T +A W+Q++D PD +P+P +LL NK
Sbjct: 106 ERFRHMIRSYFQNAHAAIIVMDATRVLPTLNASSIWRQEIDC--CFPD-SPLPTILLVNK 162
Query: 578 CD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
CD + K+ I +D+F+ E N +F TSAK ID++ + + + +L+ +
Sbjct: 163 CDLLKDKDAIIET---LDQFVVEQNIDKYFFTSAKYGTGIDESMEYIAKILLQQE 214
>gi|167393508|ref|XP_001740606.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895241|gb|EDR22979.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 208
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+KIL+IGE G GKT+I++R+ F P Y +T+GVDF KV+ ++T+ ++QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGNKTV-KMQLWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQ+RF N+T YY+ G IV+DVT A+FD V W ++ + + +P +L+
Sbjct: 66 AGQDRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSWFTEVRDR---TENDPPVIILVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D A +++ ++ F SAKD ID+ L Q I+
Sbjct: 123 NKTDLMDHAAVKQEA-VEQLARQLGGVQTFTCSAKDGSGIDEVFNALTQAII 173
>gi|410918967|ref|XP_003972956.1| PREDICTED: ras-related protein Rab-19-like [Takifugu rubripes]
Length = 224
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%), Gaps = 8/210 (3%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
+P + D +FL+KI++IG+ GKT +++ + FS + TIGVDF+++ + + +
Sbjct: 3 TPGPEQDDSFDFLFKIILIGDSNVGKTCVVQNFKSGTFSEKQQNTIGVDFSVRTVEIEGK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
+ ++Q+WD AGQERF +T+ YY+ A GA I +D+TR ATFD+V W ++V L
Sbjct: 63 KV-KIQVWDTAGQERFRTITQSYYRSAHGAVIAYDITRHATFDSVSHWI----SEVELYG 117
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + VL+ NKCD +E + K ETSAK++ N+D+A + ++
Sbjct: 118 ASNVTLVLIGNKCDLEEERQVTFEEACN-LAKNKGMLAALETSAKESQNVDEAFMMMARE 176
Query: 626 ILEND--KVQANGDSHATSEAVFSLNRNSQ 653
+L + +Q +G A L NS+
Sbjct: 177 LLARNGHNIQQHGGLAANGTPRLLLRANSR 206
>gi|313218156|emb|CBY41456.1| unnamed protein product [Oikopleura dioica]
gi|313222707|emb|CBY41703.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+L++G+ G GK+SI+ RY F+ Y TIGVDF LK + + I LQLWD AG
Sbjct: 6 LCKLLLVGDSGVGKSSILIRYTDDTFTEKYTGTIGVDFKLKKIFRKGQEI-NLQLWDTAG 64
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF ++ R +YK A G +VFD+ ++F+A+ +W ++ + IP +L+ NK
Sbjct: 65 QERFKSLVRSFYKGANGVVVVFDIGSRSSFEALRRWMSEIQGNC-----DEIPRILVGNK 119
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
D P+ + A+ E ++ + ETSAK N+ ID+ L +I+
Sbjct: 120 VDGPR---SVTKAEAQEIASKYGLQ-YIETSAKTNVGIDETFDKLTDQIM 165
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
KR+ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ LQ+W
Sbjct: 5 KRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTLQIW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+D+T +F+++ WK++ + D + P V+
Sbjct: 64 DTAGQERFQSLGGAFYRGADCCVLVYDITNKKSFESLESWKEEFKQQGQPKDPDNFPFVV 123
Query: 574 LANKCDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
L NKCD+ E + ++ A ++ K H FETSAK++ N++
Sbjct: 124 LGNKCDRASERKVESDFAS--QWCKSHGDLLNFETSAKEDTNVN 165
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 112/190 (58%), Gaps = 6/190 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSQSYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +FD + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFP 119
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D + K I+ A+ F ++ +FETSAKD +N++ A + + + L
Sbjct: 120 FVVLGNKVDVEESKRMISTKRAQ--AFCQQKGGIPYFETSAKDAVNVEQAFEVIARNALA 177
Query: 629 NDKVQ-ANGD 637
++ Q NGD
Sbjct: 178 QEESQDFNGD 187
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 110/179 (61%), Gaps = 11/179 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ LYK+++IG+ G GKT+I+ ++ F + TIGV+FA K + D +T+ + Q+WD
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTV-KAQIWDT 67
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQER+ +T YY+ AVGA I++D+T++ TF+ V KW ++L + +P + +++
Sbjct: 68 AGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELK-----ENADPSLQIMIV 122
Query: 575 ANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NK DQ +A + A + N + ETSAKD N++DA K ++Q+I ++ KV
Sbjct: 123 GNKTDQKHIRQVATDCAIA---YAQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKV 178
>gi|348558673|ref|XP_003465141.1| PREDICTED: ras-related protein Rab-3A [Cavia porcellus]
Length = 220
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + + + +
Sbjct: 120 FVVLGNKLDKASERKVQE-SKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 631 KVQANGDSHATSEAVFSLNRNSQ--ETKNGRNC 661
K D +L + SQ + K G C
Sbjct: 179 K-----DEEIFFPTTVTLTKQSQKPQAKQGGCC 206
>gi|320168875|gb|EFW45774.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 206
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 108/180 (60%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DKLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A + FDVT TF+ + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +++ AK + + N +FETSAK++IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRAVSDKRAK--AWCGQKNNIPYFETSAKESINVEQAFQTIAKNALQQE 177
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 101/181 (55%), Gaps = 25/181 (13%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A TFD + KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCD---------QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD Q E IA +EH + ETSAK N+N++ A L Q I
Sbjct: 122 NKCDIEDKRQVPKQRGESIA----------REHGIP-FLETSAKSNVNVEKAFMDLAQAI 170
Query: 627 L 627
L
Sbjct: 171 L 171
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E+L+KI+VIG+ GK++++ RY FS + +ATIGV+F + + + + + + Q+W
Sbjct: 51 REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV-KAQIW 109
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ AVGA +V+D+TR TF++V +W +L + + +L
Sbjct: 110 DTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELK----IHSDTTVARML 165
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKV 632
+ NKCD E I + + + E + ETSA D+ N+ A + ++ I N +
Sbjct: 166 VGNKCDL--ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 223
Query: 633 QANGDSH 639
Q N D++
Sbjct: 224 QLNSDTY 230
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDRESFNGVKMWLQEIDRIAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKE 171
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI++IG+ G GKT+I+KR+++ F + TIGV+FA K +++ + Q+WD
Sbjct: 10 DYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSV-KCQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGAFI +D+TR TF KW +L DGN I +++
Sbjct: 69 AGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEH---ADGN-IVIIMIG 124
Query: 576 NKCDQPKEGIANNPAKIDEF--IKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D + + + DE E G+ ETSA D NID A +V I
Sbjct: 125 NKID----AVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIF 174
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 111/190 (58%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--NKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLK 172
Query: 630 DKVQANGDSH 639
+ +G+S+
Sbjct: 173 SGGRRSGNSN 182
>gi|156393953|ref|XP_001636591.1| predicted protein [Nematostella vectensis]
gi|156223696|gb|EDO44528.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 107/181 (59%), Gaps = 8/181 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ ++ D E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNMFSGSYITTIGVDFKIRTINIDGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A TF V +W ++D + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQNC-----DDVI 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D P + + A + +F ++ N FETSAK+NIN+++ ++ + +LE
Sbjct: 115 RILVGNKDDCPSKKVVET-ADLQKFGEQMNIR-VFETSAKENINVEEIFSSITKLVLEKK 172
Query: 631 K 631
K
Sbjct: 173 K 173
>gi|78045539|ref|NP_001030253.1| ras-related protein Rab-7a [Bos taurus]
gi|108860919|sp|Q3T0F5.1|RAB7A_BOVIN RecName: Full=Ras-related protein Rab-7a
gi|74354082|gb|AAI02416.1| RAB7A, member RAS oncogene family [Bos taurus]
Length = 207
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+V+ L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 102/170 (60%), Gaps = 9/170 (5%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +LQ+WD AGQ
Sbjct: 1 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KLQVWDTAGQ 59
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +V+D+T +F+ + W + + + + +LL NKC
Sbjct: 60 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVERLLLGNKC 115
Query: 579 D-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
D + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 DMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 162
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 107/176 (60%), Gaps = 8/176 (4%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
++ +FL+KI++IG+ G GK++++ R+ F+ +ATIGV+FA K S ++ +++Q
Sbjct: 7 QEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENGQSVKVQ 66
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQER+ +T YY+ AVGA +V+D+T+ TF++V +W Q+L + I
Sbjct: 67 IWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAE----SGIVI 122
Query: 572 VLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NK D K + A EF N + + ETSA + N+D+A L+Q+I
Sbjct: 123 LLVGNKTDLHKLREVKREEAA--EFASLKNLA-FIETSALVSSNVDEAFDLLIQQI 175
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKVDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 113/186 (60%), Gaps = 9/186 (4%)
Query: 442 SKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLS 501
++ + + + D+ ++L+KI++IG+ G GK++++ R+ FS ++TIGV+FA + +
Sbjct: 2 ARRAAAWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIE 61
Query: 502 WDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKV 561
+ +TI + Q+WD AGQER+ +T YY+ AVGA +V+DVT+ ATFD V +W ++L
Sbjct: 62 VEGKTI-KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDH- 119
Query: 562 TLPDGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAK 620
D N I +L+ NK D + +A A F + S + ETSA D N+D A +
Sbjct: 120 --ADSN-IVIMLIGNKMDLKHLRSVAQEDAA--SFAEREGLS-FIETSALDATNVDRAFQ 173
Query: 621 TLVQKI 626
T++ +I
Sbjct: 174 TVLGEI 179
>gi|297845296|ref|XP_002890529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336371|gb|EFH66788.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSIRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD++ W + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNYLKSFDSLDNWHAEFLKRASPRDPMAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K E+ E +FETSAK+N N+DD+ + + L N
Sbjct: 120 FILLGNKVDVDGGNSRVVSEKKAREWCAEKGNIVYFETSAKENYNVDDSFLCITKLALAN 179
Query: 630 DKVQ 633
++ Q
Sbjct: 180 ERDQ 183
>gi|348526560|ref|XP_003450787.1| PREDICTED: ras-related protein Rab-19-like [Oreochromis niloticus]
Length = 224
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 447 PYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET 506
P + D +FL+K+++IG+ GKT +I+ + FS + TIGVDF ++ L + +
Sbjct: 4 PAPEHDDTFDFLFKLVLIGDSNVGKTCVIQNFKSGIFSEKQQNTIGVDFTVRTLDIEGKK 63
Query: 507 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDG 566
+ ++Q+WD AGQERF +T+ YY+ A GA I +D+TR +TFD+V W ++ V L
Sbjct: 64 V-KMQVWDTAGQERFRTITQSYYRSAHGAVIAYDITRRSTFDSVKHWIKE----VELYGA 118
Query: 567 NPIPCVLLANKCDQPKE-----GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKT 621
+ VL+ NKCD +E A N A K+ ETSAKD+ N+D+A
Sbjct: 119 ANVVLVLIGNKCDLEQEREVPFQEACNLA------KQKGILAALETSAKDSQNVDEAFML 172
Query: 622 LVQKIL 627
+ +++L
Sbjct: 173 MARELL 178
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 103/178 (57%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A + +EH +FETSAK ++N+D+A L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVRKEQAT--KLAQEHGIR-FFETSAKSSVNVDEAFSCLARDIL 170
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 132/249 (53%), Gaps = 12/249 (4%)
Query: 383 LKKEILSITTPIVTEAGRKKHNEPKPFTSPNSSSNGEKETAASPNTSVVAGKTSITNGSS 442
LK+ SI I+T R + P + P+SS N +K T T G S++ +
Sbjct: 243 LKEIWYSIDDEILTTTARNTAMKGDP-SCPSSSKNEKKSTKHRRKTRFFIGGCSLSEPTL 301
Query: 443 KEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW 502
K M +++ L K+ ++G+ G GKTS++ +YV+Q FS Y+ATIG DF K + +
Sbjct: 302 K------IMAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVF 355
Query: 503 DHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT 562
+ + ++ LQ+WD AGQERF ++ +Y+ A +V+D+T TF + W+ + +
Sbjct: 356 E-DKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAA 414
Query: 563 LPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFS---GWFETSAKDNINIDDAA 619
D + P ++L NK D+ E + + E+ + + FETSAK++ ++++A
Sbjct: 415 PRDPDAFPFLVLGNKVDRDSERKV-SLERAQEWCESKSLGQTLHHFETSAKESTSVEEAF 473
Query: 620 KTLVQKILE 628
+T+ L+
Sbjct: 474 RTIASIALQ 482
>gi|67473169|ref|XP_652352.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469191|gb|EAL46966.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790054|dbj|BAD82823.1| small GTPase EhRabC3 [Entamoeba histolytica]
gi|407043332|gb|EKE41887.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702822|gb|EMD43384.1| small GTPase EhRabC3, putative [Entamoeba histolytica KU27]
Length = 208
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 5/172 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+KIL+IGE G GKT+I++R+ F P Y +T+GVDF KV+ ++T+ ++QLWD
Sbjct: 7 DHLFKILIIGESGVGKTAIMQRFCENTFEPVYISTVGVDFKPKVIKVGNKTV-KMQLWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQ+RF N+T YY+ G IV+DVT A+FD V W ++ + + +P +L+
Sbjct: 66 AGQDRFRNITASYYRGTQGVLIVYDVTDRASFDKVSSWFTEVRDR---TENDPPVIILVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D A +++ ++ F SAKD ID+ L Q I+
Sbjct: 123 NKTDLMDHAAVKQEA-VEQLARQLGGVQTFTCSAKDGSGIDEVFNALTQAII 173
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +FL+K+L+IG+ G GKTSI+ R+ F + +TIG+DF ++++ D + I +L
Sbjct: 1 MAKSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+DVT+ ATF+ + W ++ D +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHA----AADVE 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
++L NKCD E + + ++ EHN + ETSA +IN+++A TL
Sbjct: 116 KMILGNKCDM-NELRQVSKERGEKLAIEHNIK-FMETSAVSSINVEEAFYTL 165
>gi|126722751|ref|NP_001075503.1| ras-related protein Rab-7a [Oryctolagus cuniculus]
gi|6685839|sp|O97572.1|RAB7A_RABIT RecName: Full=Ras-related protein Rab-7a
gi|4105817|gb|AAD02564.1| Rab7 [Oryctolagus cuniculus]
Length = 207
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 119/213 (55%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWSYSK--NNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + + +C+C
Sbjct: 175 KQETEVELYNEFPEPMKLDKNDRAKTSAESCSC 207
>gi|4506367|ref|NP_002857.1| ras-related protein Rab-3A [Homo sapiens]
gi|383873155|ref|NP_001244696.1| ras-related protein Rab-3A [Macaca mulatta]
gi|114676111|ref|XP_512511.2| PREDICTED: ras-related protein Rab-3A isoform 3 [Pan troglodytes]
gi|296233287|ref|XP_002761948.1| PREDICTED: ras-related protein Rab-3A [Callithrix jacchus]
gi|397493887|ref|XP_003817827.1| PREDICTED: ras-related protein Rab-3A isoform 1 [Pan paniscus]
gi|397493889|ref|XP_003817828.1| PREDICTED: ras-related protein Rab-3A isoform 2 [Pan paniscus]
gi|402904778|ref|XP_003915217.1| PREDICTED: ras-related protein Rab-3A [Papio anubis]
gi|403303431|ref|XP_003942330.1| PREDICTED: ras-related protein Rab-3A [Saimiri boliviensis
boliviensis]
gi|410053467|ref|XP_003953458.1| PREDICTED: ras-related protein Rab-3A [Pan troglodytes]
gi|426387780|ref|XP_004060340.1| PREDICTED: ras-related protein Rab-3A [Gorilla gorilla gorilla]
gi|131801|sp|P20336.1|RAB3A_HUMAN RecName: Full=Ras-related protein Rab-3A
gi|75075791|sp|Q4R4R9.1|RAB3A_MACFA RecName: Full=Ras-related protein Rab-3A
gi|7684383|gb|AAF67385.1|AC068499_1 RAB3A, member RAS oncogene family [Homo sapiens]
gi|20379038|gb|AAM21079.1|AF498931_1 small GTP binding protein RAB3A [Homo sapiens]
gi|550064|gb|AAA60242.1| GTP-binding protein [Homo sapiens]
gi|5678931|gb|AAD46811.1| GTP-binding protein [Homo sapiens]
gi|15079994|gb|AAH11782.1| RAB3A, member RAS oncogene family [Homo sapiens]
gi|67971128|dbj|BAE01906.1| unnamed protein product [Macaca fascicularis]
gi|119605078|gb|EAW84672.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605079|gb|EAW84673.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119605080|gb|EAW84674.1| RAB3A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|158260141|dbj|BAF82248.1| unnamed protein product [Homo sapiens]
gi|190689931|gb|ACE86740.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|190691303|gb|ACE87426.1| RAB3A, member RAS oncogene family protein [synthetic construct]
gi|208967240|dbj|BAG73634.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|351701226|gb|EHB04145.1| Ras-related protein Rab-3A [Heterocephalus glaber]
gi|355703320|gb|EHH29811.1| Ras-related protein Rab-3A [Macaca mulatta]
gi|355763570|gb|EHH62193.1| Ras-related protein Rab-3A [Macaca fascicularis]
gi|380783409|gb|AFE63580.1| ras-related protein Rab-3A [Macaca mulatta]
gi|383413957|gb|AFH30192.1| ras-related protein Rab-3A [Macaca mulatta]
gi|384944492|gb|AFI35851.1| ras-related protein Rab-3A [Macaca mulatta]
gi|410216084|gb|JAA05261.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410250372|gb|JAA13153.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410295286|gb|JAA26243.1| RAB3A, member RAS oncogene family [Pan troglodytes]
gi|410337961|gb|JAA37927.1| RAB3A, member RAS oncogene family [Pan troglodytes]
Length = 220
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|281202982|gb|EFA77183.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 199
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 103/176 (58%), Gaps = 16/176 (9%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET--IIRLQLW 513
E LYKI+++GE GK+SI+ R+ F+PH+ T+GVDF +K + + ET ++LQLW
Sbjct: 5 ETLYKIILVGETAVGKSSILVRFTDNTFTPHFAPTLGVDFNVKTIR-NKETGQTVKLQLW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++T+ +Y+ + G +V+D+T + +FD W +D++ G I +L
Sbjct: 64 DTAGQERFKSITQTFYRGSHGVIVVYDITDSKSFDRCRNWIEDIN---NYSMGGMIM-IL 119
Query: 574 LANKCDQPKEGIANNPAK--IDEF-IKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ NK D P + K DE IK + ETSAKDN+ ++ T+VQ I
Sbjct: 120 VGNKSDLPSRKVTYEQGKALADELGIK------FLETSAKDNVGVNAVFDTIVQDI 169
>gi|6679593|ref|NP_033027.1| ras-related protein Rab-3A [Mus musculus]
gi|61098195|ref|NP_037150.2| ras-related protein Rab-3A [Rattus norvegicus]
gi|178056554|ref|NP_001116651.1| ras-related protein Rab-3A [Sus scrofa]
gi|187936991|ref|NP_001120756.1| ras-related protein Rab-3A [Ovis aries]
gi|261862303|ref|NP_001159871.1| ras-related protein Rab-3A [Mus musculus]
gi|73986147|ref|XP_541942.2| PREDICTED: ras-related protein Rab-3A [Canis lupus familiaris]
gi|149757273|ref|XP_001503278.1| PREDICTED: ras-related protein Rab-3A-like [Equus caballus]
gi|301753909|ref|XP_002912772.1| PREDICTED: ras-related protein Rab-3A-like [Ailuropoda melanoleuca]
gi|344282612|ref|XP_003413067.1| PREDICTED: ras-related protein Rab-3A-like [Loxodonta africana]
gi|354473979|ref|XP_003499209.1| PREDICTED: ras-related protein Rab-3A-like [Cricetulus griseus]
gi|395847913|ref|XP_003796608.1| PREDICTED: ras-related protein Rab-3A [Otolemur garnettii]
gi|410950864|ref|XP_003982122.1| PREDICTED: ras-related protein Rab-3A [Felis catus]
gi|51702793|sp|P63012.1|RAB3A_RAT RecName: Full=Ras-related protein Rab-3A
gi|51702798|sp|P63011.1|RAB3A_MOUSE RecName: Full=Ras-related protein Rab-3A
gi|122064948|sp|Q06AU3.1|RAB3A_PIG RecName: Full=Ras-related protein Rab-3A
gi|2342528|emb|CAA51470.1| low molecular weight GTP-binding protein [Mus musculus]
gi|12837856|dbj|BAB23976.1| unnamed protein product [Mus musculus]
gi|31566349|gb|AAH53519.1| Rab3a protein [Mus musculus]
gi|56270582|gb|AAH87580.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|74177523|dbj|BAE34630.1| unnamed protein product [Mus musculus]
gi|74187365|dbj|BAE36661.1| unnamed protein product [Mus musculus]
gi|112292943|dbj|BAF02849.1| Rab3A [Mus musculus]
gi|115394766|gb|ABI97177.1| Rab-3A [Sus scrofa]
gi|148696919|gb|EDL28866.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148696920|gb|EDL28867.1| RAB3A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036066|gb|EDL90732.1| RAB3A, member RAS oncogene family [Rattus norvegicus]
gi|186886450|gb|ACC93601.1| Rab3A [Ovis aries]
gi|281343531|gb|EFB19115.1| hypothetical protein PANDA_000545 [Ailuropoda melanoleuca]
gi|344241347|gb|EGV97450.1| Ras-related protein Rab-3A [Cricetulus griseus]
Length = 220
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G + +D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 HLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 116 bits (291), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 123/217 (56%), Gaps = 12/217 (5%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETII 508
+M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K V+ D I+
Sbjct: 2 RMASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDR--IV 59
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+Q+WD AGQERF ++ +Y+ A +VFDV+ +F ++ W+ + + + D +
Sbjct: 60 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDN 119
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
P V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FPFVVLGNKVDLESRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALA 177
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGR--NCAC 663
+ + +E + + + NGR +CAC
Sbjct: 178 QE-----SEVELYNEFPDQIKLTNDQRSNGRGDSCAC 209
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 12/169 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+KR+ LYKI+++G+ G GKTS++ +YV+Q F+ YRAT+G DF K ++ D + ++ LQ+
Sbjct: 4 NKRKQLYKIIILGDSGVGKTSLMNQYVNQRFTQQYRATVGADFMAKEVTID-DRMVTLQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++ +Y+ A +V+D+T TF+ + WK++ + D + P V
Sbjct: 63 WDTAGQERFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPDTFPFV 122
Query: 573 LLANKCDQPKEG-----IANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
++ NK D+ E A K + IK FETSAKD+ N++
Sbjct: 123 VIGNKSDKASERKVETEFAQQWCKSNGDIKH------FETSAKDDTNVN 165
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 7/181 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 30 DLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKI-KLQIWDT 88
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +FD + KW +++D + + +LL
Sbjct: 89 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVEKMLLG 144
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + ++ +H + ETSAK NI ID A L + IL+ ++
Sbjct: 145 NKCDMAERRVVSRE-RGEKIANDHGIR-FLETSAKANIQIDKAFYDLAEAILDKMPIKNE 202
Query: 636 G 636
G
Sbjct: 203 G 203
>gi|146182702|ref|XP_001025075.2| Ras family protein [Tetrahymena thermophila]
gi|146143741|gb|EAS04830.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777762|dbj|BAJ21277.1| Rab-family small GTPase Rab2A [Tetrahymena thermophila]
Length = 211
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 107/173 (61%), Gaps = 9/173 (5%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K ++IG+ G GK+ I+ +++ + F + TIGV+F +++S+D++ I +LQ+WD A
Sbjct: 5 YLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNI-KLQIWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLLA 575
GQE F ++TR YY+ A GA +V+D+T+ +F + +W ++ +GNP + +L+
Sbjct: 64 GQESFRSITRSYYRSAAGALLVYDITKRESFQHLGRWLEE-----ARQNGNPQMSFILVG 118
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD ++ + ++F KEH+ + E SAK N+++A K + I E
Sbjct: 119 NKCDLEQDRQVSYEEG-EKFAKEHDLV-YLEVSAKTAYNVEEAFKQTAKMIYE 169
>gi|417408831|gb|JAA50951.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 28 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 143 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 193
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 116 bits (290), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 112/180 (62%), Gaps = 9/180 (5%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y++ +K ++++K+++IG+ GK+ ++ R+ FS +ATIGV+F + + DH+TI
Sbjct: 5 YNEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTI 64
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD VL+W ++L A D N
Sbjct: 65 -KAQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAH---ADAN 120
Query: 568 PIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + + A+ E+ ++ S + ETSA ++ N++ A T++ +I
Sbjct: 121 -IVIMLIGNKSDLSNLRQVETDTAR--EYAEKQGLS-FLETSAMESTNVETAFFTVLSEI 176
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI+VIG+ G GK+S++ R+ +S Y +TIGVDF +K + D+ T I+LQ+WD
Sbjct: 5 DYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTT-IKLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCVLL 574
AGQERF +T YY+ A G V+DVT +FD + + W QD+D T + + +L+
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYAT----SNVCKLLI 119
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NK D + + A + + E N + E SAK + N++ A T+ + + DKV
Sbjct: 120 GNKIDLAESRVV--SADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKAL--KDKV 173
>gi|145521654|ref|XP_001446682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414160|emb|CAK79285.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 11/190 (5%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
K D + L KIL+IG G GKT I+ RY F + +TIG+DF +K + D E +++
Sbjct: 7 KAKDTYDLLIKILLIGNSGVGKTQILLRYTENQFKSSFLSTIGIDFKIKKIQVD-EKVVK 65
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQER+ +T+ YYK A+G +VF V TF+ + KW + + + I
Sbjct: 66 MQIWDTAGQERYQTITQTYYKGAMGIILVFAVNDKETFNDIDKWMNQIKQHAS----DNI 121
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--- 626
VL+ NK D P I+ A + +++N +FETSAK+ NI+D + + + I
Sbjct: 122 IKVLIGNKTDLPDRCISYEQAL--QMAQKYNIP-YFETSAKEGTNINDTFQQIAKTIKEQ 178
Query: 627 LENDKVQANG 636
LE Q NG
Sbjct: 179 LEKLPQQQNG 188
>gi|118354199|ref|XP_001010362.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89292129|gb|EAR90117.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777900|dbj|BAJ21346.1| Rab-family small GTPase Rab11F [Tetrahymena thermophila]
Length = 234
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 102/178 (57%), Gaps = 5/178 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M D + L+KI+++GE G GK+ +++RY F+ Y TIG +FA + ++ ++++
Sbjct: 1 MADTGQLLFKIIMLGETGVGKSQMLQRYTKNKFTEDYVTTIGAEFATTSVKLNNGQVVQV 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQE+F ++TR +Y+ AVGA +V+D++ TF KW LD N I
Sbjct: 61 QIWDTAGQEKFRSITRAFYRGAVGAVLVYDISDQQTFKKCDKW---LDEIKQYNQDNQIA 117
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D + NN ++ F + N + F SAK N+ +A +L+++I +
Sbjct: 118 ILLVGNKKDLIDKQQVNNQEALN-FAQSKNLALAF-CSAKTGDNVKEAFTSLIEEIYQ 173
>gi|307180592|gb|EFN68547.1| Ras-related protein Rab-8A [Camponotus floridanus]
Length = 279
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LV+G+ GKT I+ RY + + Y +TIG+DF K+++ D T I+LQ+WD AGQ
Sbjct: 72 YKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKIINLDG-TPIKLQIWDTAGQ 130
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +++DVT +F+ + W +++ + PD + VL ANKC
Sbjct: 131 ERFRTLTTAYYRGAMGILLMYDVTSLESFNHLSYWLRNIQENAS-PD---VVKVLAANKC 186
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
D + A+ + I E+ +FE S K+NINI++A TL
Sbjct: 187 DATAHRAVD--AERGQKIAENFDMPFFEVSCKENINIEEAFLTL 228
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+DVT +FD + KW Q++ + ++L
Sbjct: 66 AGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNIQEHA----AEEVDKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + + K + +E+ + ETSAK N+NI+ A L + ILE
Sbjct: 122 NKCDMEDKRVISK-EKGEAISREYGIR-FLETSAKTNVNIERAFMDLAESILE 172
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R +TF++V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRW---LDELKTHSD-TTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + +++ I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 635 NGDSHAT 641
N D++ T
Sbjct: 183 NSDTYKT 189
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 25/214 (11%)
Query: 440 GSSKEVSPY-SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK 498
GSS +S S M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++
Sbjct: 5 GSSGGISAIISSMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIR 64
Query: 499 VLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLD 558
+ D + I +LQ+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++
Sbjct: 65 TIELDGKKI-KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIE 123
Query: 559 AKVTLPDGNPIPCVLLANKCD-QPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNIN 614
+ + ++L NKCD K ++ + + +D IK + ETSAK NIN
Sbjct: 124 EHAS----ADVEKMVLGNKCDINDKRQVSKDRGEQLALDYGIK------FMETSAKANIN 173
Query: 615 IDDAAKTLVQKI-------LENDKVQANGDSHAT 641
+++A TL + I LE + Q G SH
Sbjct: 174 VENAFLTLARDIKSKMDTKLEGNTQQ--GGSHGV 205
>gi|196049930|pdb|3DZ8|A Chain A, Crystal Structure Of Human Rab3b Gtpase Bound With Gdp
Length = 191
Score = 116 bits (290), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + HE ++LQ+WD
Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 79
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWATQIKTYSWDNAQVILVG 135
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD +E + P + + + E +FE SAK+NI++ A + LV I +
Sbjct: 136 NKCDMEEERVV--PTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 186
>gi|391334451|ref|XP_003741617.1| PREDICTED: ras-related protein Rab-23-like [Metaseiulus
occidentalis]
Length = 216
Score = 116 bits (290), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 7/184 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E +K++V+G GK+S+I+R+ FS +Y+ TIGVDF +VL + +RL +WD
Sbjct: 4 ELAFKLVVVGNGAVGKSSLIQRFCRGVFSQNYKQTIGVDFLERVLEIGNGRCVRLMVWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQE F +TR YY+ A GA + F T +F+AV W+ ++A+ +P VL+
Sbjct: 64 AGQEEFDALTRAYYRGAHGAILAFSSTDLQSFEAVDSWRSKVEAEC-----GSLPMVLVQ 118
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D + + +P + + H + TSAK + N+D+A + L +K +E + N
Sbjct: 119 NKMDLADQALV-SPEMAENAARRHRLR-LYRTSAKQDFNVDEAFRYLAEKCMEALSRELN 176
Query: 636 GDSH 639
+H
Sbjct: 177 DCNH 180
>gi|440896449|gb|ELR48367.1| Ras-related protein Rab-3A, partial [Bos grunniens mutus]
Length = 221
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 21 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 79
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 135
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 136 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 186
>gi|38051907|gb|AAH60562.1| Rab3b protein [Rattus norvegicus]
Length = 228
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 35/248 (14%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV G T I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGNTGIRDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKE-------HNF 601
AV QD ++ + +L+ NKCD +E + P + + E H +
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVI--PTEKGRLLAEQLGMHTAHTY 165
Query: 602 SG--WFETSAKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN-- 657
+ +FE SAK+NI++ A + LV I DK+ DS T +V ++ ++ +
Sbjct: 166 TWFDFFEASAKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPP 220
Query: 658 --GRNCAC 663
+NC+C
Sbjct: 221 LLQQNCSC 228
>gi|110350677|ref|NP_776871.2| ras-related protein Rab-3A [Bos taurus]
gi|116242742|sp|P11023.3|RAB3A_BOVIN RecName: Full=Ras-related protein Rab-3A; AltName: Full=SMG P25A
gi|109658293|gb|AAI18279.1| RAB3A, member RAS oncogene family [Bos taurus]
gi|296486045|tpg|DAA28158.1| TPA: ras-related protein Rab-3A [Bos taurus]
Length = 220
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 100/172 (58%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ FS + +TIG+DF +K + E I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVEL-QEKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW ++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D + + K ++ +EH +FETSAK N NI+ A TL Q IL
Sbjct: 122 NKFDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANTNIEKAFLTLAQDIL 171
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEVKRKVQKEQA--EKLAREHGIR-FFETSAKSSLNVDEAFNSLARDIL 170
>gi|313227767|emb|CBY22916.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 12/171 (7%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIRLQLWDIA 516
L K+L++G+ G GK+SI+ RY F+ Y TIGVDF LK + E I LQLWD A
Sbjct: 6 LCKLLLVGDSGVGKSSILIRYTDDTFTEKYTGTIGVDFKLKKIFRKGQE--INLQLWDTA 63
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERF ++ R +YK A G +VFD+ ++F+A+ +W ++ + IP +L+ N
Sbjct: 64 GQERFKSLVRSFYKGANGVVVVFDIGSRSSFEALRRWMSEIQGNC-----DEIPRILVGN 118
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
K D P+ + A+ E ++ + ETSAK N+ ID+ L +I+
Sbjct: 119 KVDGPR---SVTKAEAQEIASKYGLQ-YIETSAKTNVGIDETFDKLTDQIM 165
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 108/181 (59%), Gaps = 9/181 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG G GK+ ++ RY F+ ++ TIGVDF +K + D E I++LQ+WD
Sbjct: 30 DYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLD-EQIVKLQIWDT 88
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC-VLL 574
AGQERF +T YY+ A G IV+DVT +F+ V +W +++ N C +L+
Sbjct: 89 AGQERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQWMHEIE-----RFANAGVCKILV 143
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NKCD + ++ ++ + +H + ETSAK++IN++ + T+ +I N + +A
Sbjct: 144 GNKCDMEESRKVSHEEGME--LAKHYEIPFLETSAKNSINVETSFITMSNEIKRNIQNKA 201
Query: 635 N 635
N
Sbjct: 202 N 202
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D E ++ +
Sbjct: 1 MSARKRTLLKLIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVKIDDENLVTM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +F + W+++ A+ + D P
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNERSFQNLENWREEFLAQASPADAENFP 120
Query: 571 CVLLANKCDQ--PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++L NK DQ + + + + N FETSAK++ N+ DA + + L+
Sbjct: 121 FIVLGNKTDQDGGQSRVVSEKKALSFCAASGNQCPHFETSAKEDSNVQDAFECAARNALK 180
Query: 629 ND 630
N+
Sbjct: 181 NE 182
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R +TF++V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRW---LDELKTHSD-TTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + +++ I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQL 182
Query: 635 NGDSHAT 641
N D++ T
Sbjct: 183 NSDTYKT 189
>gi|47183024|emb|CAG13912.1| unnamed protein product [Tetraodon nigroviridis]
Length = 79
Score = 116 bits (290), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 1/75 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++E LYKILVIG+LG GKTSIIKRYVH FSP+YRATIGVDFALKVL+WD ET +RLQLW
Sbjct: 6 QKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQET-VRLQLW 64
Query: 514 DIAGQERFGNMTRVY 528
DIAG +F + + Y
Sbjct: 65 DIAGTLKFNFILKTY 79
>gi|27696356|gb|AAH43857.1| Rab3d protein, partial [Xenopus laevis]
Length = 246
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 28/217 (12%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E ++LQ+WD
Sbjct: 49 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDT 107
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D++ +F+AV QD ++ + +L+
Sbjct: 108 AGQERYRTITTAYYRGAMGFLLMYDISNLESFNAV----QDWATQIKTYSWDNAQVLLVG 163
Query: 576 NKCDQPKEGI--ANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI------- 626
NKCD + + A + K+ E E F +FE SAKDNIN+ + LV I
Sbjct: 164 NKCDLEDDRVIAAEDGRKLAE---ELGFE-FFEASAKDNINVKQVFERLVDIICEKMNES 219
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LEN V +G + T A K+ NC+C
Sbjct: 220 LENGPVPGSGTAQLTESA----------PKDNSNCSC 246
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R+ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRRKILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D ++ A+ ++ N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLENRAVSTKRAQ--QWCHAKNDIPYFETSAKEGINVEQAFQTIARNAL 174
>gi|253743957|gb|EET00230.1| Rab2b [Giardia intestinalis ATCC 50581]
Length = 227
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW----DHETIIRL 510
+++K +++G+ GK+ ++ R+V Q F P + T+GV+F K L E I++
Sbjct: 6 HHYIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTIKV 65
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL---PDG- 566
Q+WD AGQE+F ++TR YY+ A GA +V+DVT ++F+A+ W +D+ A V + P+G
Sbjct: 66 QIWDTAGQEQFRSITRSYYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGV 125
Query: 567 NPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + +L+ NK D + K ++ ++F ++H + ETSAKDN+N+ ++ +
Sbjct: 126 SGMVIMLVGNKTDLEHKRKVSREEG--EQFARDHGLL-FIETSAKDNLNVSESFNETARA 182
Query: 626 ILE 628
ILE
Sbjct: 183 ILE 185
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 108/179 (60%), Gaps = 10/179 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF +++ D + I +LQ+WD
Sbjct: 13 DYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRI-KLQIWDT 71
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+DVT ++F+ + W ++++ + + + +L+
Sbjct: 72 AGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQHAS----DNVNKILVG 127
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA----AKTLVQKILEND 630
NK D + A + A+ E E+ +FETSAK NIN++ A AK +++++ E D
Sbjct: 128 NKADMDESKRAVSTARGQELADEYGIK-FFETSAKTNINVEQAFFSIAKDIMKRLSETD 185
>gi|241124292|ref|XP_002404123.1| RAB-19, 41 and, putative [Ixodes scapularis]
gi|215493584|gb|EEC03225.1| RAB-19, 41 and, putative [Ixodes scapularis]
Length = 208
Score = 116 bits (290), Expect = 5e-23, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 119/213 (55%), Gaps = 15/213 (7%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D +FL+KI++IG+ G GKT ++ R+ + + TIGVDFA+K L+ + + + +LQ+
Sbjct: 5 DHFDFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKV-KLQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +T+ YY+ A G IV+D+T+ ++F ++ +W ++ V G+ +P +
Sbjct: 64 WDTAGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEE----VRRYTGSNVPLL 119
Query: 573 LLANKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
L+ NKCD +E + E E F ETSAK+N NI+ A L ++
Sbjct: 120 LIGNKCDSESLREVTPEEAQGLAEQYPE--FMAVLETSAKENTNIEAAFVALATEL---- 173
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + H T E + ++ +S TK G AC
Sbjct: 174 KNTHDPVGHLTDEDLRRISLSS--TKVGHKAAC 204
>gi|218511591|gb|ACK77787.1| RAB7 [Cyprinus carpio]
Length = 204
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 107/183 (58%), Gaps = 3/183 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN+D A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQE 177
Query: 631 KVQ 633
V+
Sbjct: 178 SVE 180
>gi|219887285|gb|ACL54017.1| unknown [Zea mays]
gi|413949817|gb|AFW82466.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 206
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD N++DA +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKE 171
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 109/189 (57%), Gaps = 12/189 (6%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E+L+KI+VIG+ GK++++ RY FS + +ATIGV+F + ++ + + + + Q+W
Sbjct: 8 REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEV-KAQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ AVGA +V+D+TR TF++V +W +L + + +L
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDEL----KIHSDTTVARML 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWF--ETSAKDNINIDDAAKTLVQKILEN-D 630
+ NKCD E I +DE G F ETSA D+ N+ A + ++ I N
Sbjct: 123 VGNKCDL--ENI--RAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVS 178
Query: 631 KVQANGDSH 639
+ Q N D++
Sbjct: 179 RKQLNSDTY 187
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++ ++ ++L+KI++IG+ G GK++I+ R+ F ++TIGV+FA + L D +T+ +
Sbjct: 133 RVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV-K 191
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD+V +W ++L D N I
Sbjct: 192 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHA---DAN-I 247
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D + + P + E + ETSA + IN++ A T++ +I
Sbjct: 248 VVMMVGNKSDLNH--LRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEI 302
>gi|229594060|ref|XP_001025689.3| Ras family protein [Tetrahymena thermophila]
gi|225567120|gb|EAS05444.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 7/166 (4%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK++ IG+ GKTSII R+++ F + T+G+DF K L D++TI RLQLWD AGQ
Sbjct: 13 YKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTI-RLQLWDTAGQ 71
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D+T A+F +V KW LD V G+ + VLLANK
Sbjct: 72 ERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKW---LDY-VREERGDGVLIVLLANKL 127
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
D P + A +F K+ N + E SAK+ NI+D K L Q
Sbjct: 128 DLPDQR-AVQTVDGQQFAKQQNLI-FSEVSAKEGNNINDVFKNLAQ 171
>gi|326494438|dbj|BAJ90488.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD IN+++A +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGINVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ +FL+K+++IG+ G GK++++ R+ F+ ++TIGV+FA + + D +TI + Q+
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTI-KAQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA +V+D+++ T+D V +W ++L N I +
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHA----DNNIVIM 118
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LEN 629
L+ NK D + + AK F E++ S + ETSA D+ N++ A +T++ +I + +
Sbjct: 119 LVGNKSDLRHLRAVPTEDAK--NFAAENHLS-FIETSALDSTNVELAFQTILTEIYRIVS 175
Query: 630 DKVQANGDSHATSE 643
K GD H S+
Sbjct: 176 SKALDGGDQHQVSQ 189
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 122/213 (57%), Gaps = 5/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ + ++ + N +FETSAK+ +N++ A +T+ + L +
Sbjct: 120 FVILGNKVDLDNRAVSVKRGQ--QWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 177
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+A + + + N N + ++G NCAC
Sbjct: 178 -TEAELYNEFPDQIKLNANDNGR-NRDGDNCAC 208
>gi|340728042|ref|XP_003402341.1| PREDICTED: ras-related protein Rab-35-like [Bombus terrestris]
Length = 249
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
+ KM + + L+K+L+IG+ G GK+S++ R+ F+ Y TIGVDF ++ + D E +
Sbjct: 46 HVKMAREYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERV 105
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+LQ+WD AGQERF +T YY+ G +V+DVT +F V +W +++ + +
Sbjct: 106 -KLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIE-----QNCD 159
Query: 568 PIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ VL+ NK D P E + F + FETSAKDNIN+ + + +++L
Sbjct: 160 VVNRVLVGNKNDAPNEKVVLTEDA-QRFANQMGIQ-LFETSAKDNINVQEMFMAITRQVL 217
Query: 628 ENDKVQANGDSHATSEAV 645
K + + TSE V
Sbjct: 218 RTKKERKERQAIQTSETV 235
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 9/181 (4%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ G GK+ I+ RY FS +ATIGV+F + L DH+++
Sbjct: 7 YGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+DVTR TFD + +W ++L D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNN---ADKN 122
Query: 568 PIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + + I+ AK D KE F + ETSA + +N++ A T++ +I
Sbjct: 123 -IVIILVGNKSDLEDQRAISMEDAK-DFAEKEGLF--FLETSALNAVNVESAFSTVLTEI 178
Query: 627 L 627
Sbjct: 179 F 179
>gi|444726632|gb|ELW67156.1| Ras-related protein Rab-3A [Tupaia chinensis]
Length = 208
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 22/217 (10%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++ L KI+V+G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ LQ+W
Sbjct: 6 RKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVD-DKLVTLQIW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+DV TFD + W + + + D P VL
Sbjct: 65 DTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPFVL 124
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSG----WFETSAKDNINIDDAAKTLVQKILEN 629
L NK D N+ ++ ++ SG +FETSAK+ N+++A + + LEN
Sbjct: 125 LGNKVDVDG---GNSRRVTEKKARDWCTSGGNIPYFETSAKEGYNVEEAFSCVAKIALEN 181
Query: 630 DKVQA---NGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ Q G S A SEA E ++G CAC
Sbjct: 182 EHDQDIYFRGISEAVSEA---------EQRSG--CAC 207
>gi|432857138|ref|XP_004068548.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L+RN + + +C+C
Sbjct: 175 KQETEVEPYPDFPEPIKLDRNDRAKASADSCSC 207
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 108/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+D+T +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDITDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD K + + AK EF E N + ETSA D+ N+++A T+ ++I E
Sbjct: 116 KLLVGNKCDLNDKRVVEYDVAK--EF-AEANKMPFLETSALDSTNVEEAFLTMARQIKE 171
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASKKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDI 170
>gi|281204144|gb|EFA78340.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 217
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 4/173 (2%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
+ K+LV+G GKTSII RY H +Y+ T+GVD K+ + + + L WDI+G
Sbjct: 19 MVKVLVLGGPRTGKTSIINRYCHNKIPSNYKVTVGVDCVSKI-TVVNGVKVELFFWDISG 77
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QER+ +MTR Y++ A G FIVFDV+ T +A WK ++D P+ PIP +LLANK
Sbjct: 78 QERYAHMTRQYFENAKGVFIVFDVSDEKTLEAAEAWKAEVDN--CFPN-EPIPSILLANK 134
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
D+ + + D+F + + WF TSA +D++ LV+ I +++
Sbjct: 135 SDKILDLKEVPYRRYDQFCEYNKIVKWFLTSAMAGTGLDESVDELVKLIFDSN 187
>gi|293332671|ref|NP_001169258.1| uncharacterized protein LOC100383121 [Zea mays]
gi|242088493|ref|XP_002440079.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|223975857|gb|ACN32116.1| unknown [Zea mays]
gi|241945364|gb|EES18509.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|413946071|gb|AFW78720.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591123|tpg|DAA41694.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 206
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD N++DA +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|54696260|gb|AAV38502.1| RAB3A, member RAS oncogene family [synthetic construct]
gi|61368754|gb|AAX43231.1| RAB3A member RAS oncogene family [synthetic construct]
Length = 221
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 106/176 (60%), Gaps = 9/176 (5%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
D ++ YKI++IG+ G GKT+I+ ++ FS + T+GV+FA K L D + II+ Q
Sbjct: 4 SDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVID-DKIIKAQ 62
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWD AGQER+ + YYK A GA IVFD+T+ +TFD V +W +++ + N I
Sbjct: 63 LWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTS----NEISI 118
Query: 572 VLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NK D + ++++ + + +H + + ETSAKD N+++A L+ +I
Sbjct: 119 ILVGNKSDLRHLRQVSSDVSS--AYASKHKIA-FLETSAKDGANVNEAFNKLINEI 171
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L+RN + + +C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDRNDRAKASAESCSC 207
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 122/216 (56%), Gaps = 12/216 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIR 509
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K V+ D I+
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDR--IVT 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQERF ++ +Y+ A +VFDV+ +F ++ W+ + + + D +
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
P V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 119 PFVVLGNKVDLESRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQ 176
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGR--NCAC 663
+ + +E + + + NGR +CAC
Sbjct: 177 E-----SEVELYNEFPDQIKLTNDQRSNGRSDSCAC 207
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 109/183 (59%), Gaps = 4/183 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP K++ L K++++G+ GKTS++ +YV++ FS Y+ATIG DF K + D + + +
Sbjct: 1 MPPKKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEV-TI 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +FD++ WK + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQSSPADPDAFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ KE + AK + F +FETSAK IN+ A + + +K ++++
Sbjct: 120 FVVLGNKVDE-KEKRRVSAAKAEAFCGSK--ISYFETSAKQAINVSAAFEEIARKAMQHE 176
Query: 631 KVQ 633
Q
Sbjct: 177 TKQ 179
>gi|307777800|dbj|BAJ21296.1| Rab-family small GTPase Rab6C [Tetrahymena thermophila]
Length = 224
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 7/166 (4%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK++ IG+ GKTSII R+++ F + T+G+DF K L D++TI RLQLWD AGQ
Sbjct: 13 YKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKTI-RLQLWDTAGQ 71
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D+T A+F +V KW LD V G+ + VLLANK
Sbjct: 72 ERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKW---LDY-VREERGDGVLIVLLANKL 127
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
D P + A +F K+ N + E SAK+ NI+D K L Q
Sbjct: 128 DLPDQR-AVQTVDGQQFAKQQNLI-FSEVSAKEGNNINDVFKNLAQ 171
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ ++ + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+ +A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRRVQKEQA--DKLAQEHGIR-FFETSAKSSVNVAEAFSSLARDIL 170
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 103/178 (57%), Gaps = 17/178 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K +A +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEVKRKLA----------REHGIR-FFETSAKSSLNVDEAFSSLARDIL 162
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 123/216 (56%), Gaps = 12/216 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIR 509
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K V+ D I+
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDR--IVT 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQERF ++ +Y+ A +VFDV+ +F ++ W+ + + + D +
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
P V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 119 PFVVLGNKVDLESRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQ 176
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGR--NCAC 663
+ + +E + ++ + NGR +CAC
Sbjct: 177 E-----SEVELYNEFPDQIKLSNDQRSNGRGDSCAC 207
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 106/175 (60%), Gaps = 9/175 (5%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
PD ++L+K+L+IG+ G GK+ ++ R+ + FS Y +TIGVDF ++ + D + +++LQ
Sbjct: 3 PD-YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGK-VVKLQ 60
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ A G IV+ VT +F V W Q+++ + +
Sbjct: 61 IWDTAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKSWLQEIEHYA----NSTVNR 115
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD PK + ++ F KEH + ETSAK+ IN++DA + ++I
Sbjct: 116 LLVGNKCDLPKSRAVDTVDAMN-FAKEHQMP-FLETSAKEAINVEDAFMEMARQI 168
>gi|170046123|ref|XP_001850628.1| ras-related protein Rab-7 [Culex quinquefasciatus]
gi|167869001|gb|EDS32384.1| ras-related protein Rab-7 [Culex quinquefasciatus]
Length = 208
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 121/224 (54%), Gaps = 27/224 (12%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVID-DRVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D T TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN- 629
V+L NK D ++ A+ ++ + N +FETSAK+ IN+D A +T+ + L
Sbjct: 120 FVVLGNKIDLENRAVSTKRAQ--QWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 630 ----------DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D+++ N D RN++ +NG NC+C
Sbjct: 178 SEVELYNEFPDQIKLNAD------------RNNRP-RNGDNCSC 208
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 115 bits (288), Expect = 7e-23, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 116/208 (55%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + N + + +EH+ + ETSAK NINI+ A L + IL+ +
Sbjct: 122 NKCDMTDKRVVNK-ERGEAIAREHSIR-FMETSAKSNINIERAFCELAEAILD----KTA 175
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
G A + ++R + + G N C
Sbjct: 176 GRESAENPERVVIDRGNSDKAPGYNKCC 203
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 124/226 (54%), Gaps = 19/226 (8%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y + ++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+
Sbjct: 3 YGDANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 62
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N
Sbjct: 63 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN 118
Query: 568 PIPCVLLANKCD-QPKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
I +L NKCD + + + AK EF KE F + ETSA + N++ A T++ +
Sbjct: 119 -IVIILTGNKCDLENQRDVPTEDAK--EFAEKEGLF--FLETSALEATNVETAFITVLTE 173
Query: 626 I--------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
I L D+ Q NG+S + S + +QE RN C
Sbjct: 174 IYNIVNKKNLTADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCC 219
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L+RN + + C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDRNERAKPSAETCSC 207
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + G C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDKNDRAKPPGETCSC 207
>gi|224062828|ref|XP_002300895.1| predicted protein [Populus trichocarpa]
gi|118486942|gb|ABK95304.1| unknown [Populus trichocarpa]
gi|222842621|gb|EEE80168.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 26/222 (11%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + T D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDPRTFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG------WFETSAKDNINIDDAAKTLVQ 624
+LL NK D I +++ K ++ +FETSAK++ N+D A ++ +
Sbjct: 120 FILLGNKID-----IDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDPAFLSIAK 174
Query: 625 KILENDK---VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
L N+ + G A SE+ E + G CAC
Sbjct: 175 IALANEHEQDIYFQGIPEAASES---------EQRGG--CAC 205
>gi|410921832|ref|XP_003974387.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + +H +FE SAKDNIN+ + LV I E
Sbjct: 134 NKCDMDDERVVSGDRGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDIICE 184
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKVDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L+RN + + C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDRNDRAKPSAETCSC 207
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 107/174 (61%), Gaps = 9/174 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL KI++IG+ G GKT+++ R+ F+P ++TIGV+FA K L + +T+ + Q+WD
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTV-KAQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+GA +++D+T + TF+++ +W Q+L D N I +L+
Sbjct: 66 AGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELREN---ADSN-IVVMLVG 121
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D Q ++ F ++ N + ETSA++ N+ +A TL+ +I+
Sbjct: 122 NKSDLQELRAVSTEDGT--GFSQQENLL-FIETSARNATNVQEAFTTLITEIVH 172
>gi|291388446|ref|XP_002710790.1| PREDICTED: RAB7A, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 207
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ F Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFRNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLCVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ Q L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIAQNALKQE 177
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 108/177 (61%), Gaps = 7/177 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D + +++L
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK-VVKL 62
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G + +DVT +F+ V +W Q++D + + N +
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEID-RYACENVNKL- 120
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NKCD + + ++ EF K+ + + ETSAKD+ N++ A K + + I+
Sbjct: 121 --LVGNKCDLTTKKVVDHSTAA-EFAKQLDIP-FLETSAKDSTNVEQAFKKMAEDIM 173
>gi|255712835|ref|XP_002552700.1| KLTH0C11132p [Lachancea thermotolerans]
gi|238934079|emb|CAR22262.1| KLTH0C11132p [Lachancea thermotolerans CBS 6340]
Length = 208
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 9/215 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ FS Y+ATIG DF K ++ D + + +
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKFSQQYKATIGADFLTKEVTMDGDKVATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT A +F+ + W+ + + P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVSSPETFP 120
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D + K+ ++N A+ + K F TSAK +IN+D A + + + L+
Sbjct: 121 FVILGNKLDVEESKKVVSNRSAQ--DMAKSLGNIPLFLTSAKGSINVDTAFEEIARNALQ 178
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ A+ ++A+ N Q +C+C
Sbjct: 179 QSQADADAFEDDFNDAI-----NIQLDGEPSSCSC 208
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 111/179 (62%), Gaps = 9/179 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
++ D+ ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + + + + II
Sbjct: 2 ARSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGK-II 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD V +W ++L D N
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDH---ADAN- 116
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D Q + + + A E N + ETSA DN N+++A ++++ +I
Sbjct: 117 IVIMLVGNKSDLQHLKAVTTDDASA---FAESNGLSFIETSALDNSNVEEAFRSILSEI 172
>gi|15234026|ref|NP_192710.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|75164695|sp|Q948K8.1|RAG3A_ARATH RecName: Full=Ras-related protein RABG3a; Short=AtRABG3a; AltName:
Full=Ras-related protein Rab76; Short=AtRab76
gi|15718418|dbj|BAB68376.1| AtRab76 [Arabidopsis thaliana]
gi|110738224|dbj|BAF01041.1| AtRab76 [Arabidopsis thaliana]
gi|119360063|gb|ABL66760.1| At4g09720 [Arabidopsis thaliana]
gi|332657383|gb|AEE82783.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 206
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L E ++ L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQ-IGEKLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + + D P
Sbjct: 60 QIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFP 119
Query: 571 CVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++L NK D + ++ D N +FETSAKD+ N+D+A T+ + L
Sbjct: 120 FIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIP-YFETSAKDDFNVDEAFLTIAKTALA 178
Query: 629 NDKVQ 633
N+ Q
Sbjct: 179 NEHEQ 183
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 115 bits (288), Expect = 8e-23, Method: Composition-based stats.
Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T TFD + KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + K ++ ++ +EH + ETSAK NINI+ A L Q IL
Sbjct: 122 NKCDVEDKRAVSKEKGEM--IAREHGIR-FMETSAKANINIESAFYELAQAIL 171
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 107/177 (60%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV + FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MASRKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLSKEVRVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV+ ++F ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A + + + L
Sbjct: 120 FVVLGNKVDLESRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQAIAKNAL 174
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 103/174 (59%), Gaps = 9/174 (5%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+R++L+K+L+IG+ G GK+ ++ R+ + Y +TIGVDF ++ + D +TI +LQ+W
Sbjct: 20 RRDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTI-KLQIW 78
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ A G IVFDVT +F V W ++D T + I +L
Sbjct: 79 DTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKGWLTEIDKFAT----DNINKLL 134
Query: 574 LANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ NKCD K ++N AK F E + ETSAK+ N++DA T+ +I
Sbjct: 135 VGNKCDVTNKRVVSNETAK--AFADEIGIP-FLETSAKNATNVEDAFMTMAAEI 185
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + G C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDKNDRAKAPGEGCSC 207
>gi|28875789|ref|NP_789862.1| ras-related protein Rab-3C [Bos taurus]
gi|162764|gb|AAA30418.1| GTP-binding protein [Bos taurus]
Length = 218
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV W L+ + + I L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS--LNQTYSWDNAQVI---LVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + + EH +FETSAKDNIN+ + LV I +
Sbjct: 134 NKCDMEDERVISSEEG--QHLGEHLGFEFFETSAKDNINVKQTFERLVDIICD 184
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 111/206 (53%), Gaps = 8/206 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D P + +F ++ S FETSAK+N+N+++ + + +L+
Sbjct: 115 RILVGNKNDDPNSKVV-ETTDAQKFAEQMGIS-LFETSAKENVNVEEMFNCITELVLKAK 172
Query: 631 KVQANGDSHATSEAVFSLNRNSQETK 656
K V L RNS+ K
Sbjct: 173 KEVLAKQQQQQQNDVVKLTRNSKRKK 198
>gi|221054328|ref|XP_002258303.1| Rab7 GTPase [Plasmodium knowlesi strain H]
gi|193808372|emb|CAQ39075.1| Rab7 GTPase, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 7/212 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +K+ + K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K D+E + +
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNENL-TM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFD+T T++++ WK + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D+ + K+ ++ K +N +FETSAK+ IN+D A + +K ++
Sbjct: 120 FVIIGNKVDETNKRKV-QSLKVMQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMK-- 176
Query: 631 KVQANGDSHATSEAVFSL-NRNSQETKNGRNC 661
Q + + F+L N+ Q+ R C
Sbjct: 177 --QEHQEEQIYLPETFALNNQGDQKIYKSRCC 206
>gi|240849471|ref|NP_001155484.1| ras-related protein Rab-7-like [Acyrthosiphon pisum]
gi|239791100|dbj|BAH72062.1| ACYPI002607 [Acyrthosiphon pisum]
Length = 209
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 122/224 (54%), Gaps = 26/224 (11%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ GKTS++ +YV++ F+ Y+ATIG DF K + D + I+ +
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQASPSDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN- 629
V+L NK D ++ A+ ++ + N +FETSAK+ +N++ A KT+ + L
Sbjct: 120 FVVLGNKVDLDNRAVSTKRAQ--QWCQSKNGLPYFETSAKEAVNVEQAFKTIARNALAQE 177
Query: 630 ----------DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D+++ +G S + NR+S NCAC
Sbjct: 178 SDVELYNEFPDQIKLDGGS--------TDNRSS----GSDNCAC 209
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + + + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 631 KVQANGDSHATSEAVFSLNRNSQ--ETKNGRNC 661
K D +L + SQ + K G C
Sbjct: 179 K-----DEEIFFPTTVTLTKQSQKPQAKQGGCC 206
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 114/192 (59%), Gaps = 19/192 (9%)
Query: 441 SSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVL 500
+++ + + + D+ ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA +
Sbjct: 2 AARRAAAWEQGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTT 61
Query: 501 SWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
+ +TI + Q+WD AGQER+ +T YY+ AVGA +V+DVT+AATF+ V +W ++L
Sbjct: 62 QVEGKTI-KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDH 120
Query: 561 VTLPDGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGW-----FETSAKDNIN 614
D N I +L+ NK D + +A + A F+ W ETSA D N
Sbjct: 121 ---ADSN-IVIMLIGNKTDLRHLRSVATDKAA--------GFAEWEGLSFIETSALDATN 168
Query: 615 IDDAAKTLVQKI 626
+D A +T++ +I
Sbjct: 169 VDKAFQTVLAEI 180
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT A +F ++ W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQASPRDSENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + A+ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLENRAVTMKRAQ--NWCTSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|209155660|gb|ACI34062.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + N +FETSAK+ IN+D A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQE 177
>gi|167523387|ref|XP_001746030.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775301|gb|EDQ88925.1| predicted protein [Monosiga brevicollis MX1]
Length = 144
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 80/143 (55%), Gaps = 19/143 (13%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+L+IG+ GK+S+I RYV + F +Y T+GV+ L GQE
Sbjct: 13 KVLIIGDSAVGKSSLIARYVAKKFEANYLTTLGVNSKL------------------TGQE 54
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RFG + RVYYK A +V DVTR T D V +WK++LD KVT PDG P+P +LL NKCD
Sbjct: 55 RFGQLLRVYYKNANACMVVCDVTRKQTLDNVSQWKRELDDKVTHPDGGPLPAILLVNKCD 114
Query: 580 QPKEGIANNPAKIDEFIKEHNFS 602
KE + I+ KE+ S
Sbjct: 115 M-KEARKVSTEDIERVAKEYGLS 136
>gi|31199429|ref|XP_308662.1| AGAP007096-PA [Anopheles gambiae str. PEST]
gi|21291806|gb|EAA03951.1| AGAP007096-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 13/210 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KI++IG+ G GKT I++R+ F + TIGVDF++K +S D + + +LQ+WD
Sbjct: 19 DFLFKIVLIGDCGTGKTCIVQRFKSGNFIESHGNTIGVDFSMKAVSVDGKKV-KLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T+ YY+ A G IV+D+T+ +TF ++ +W + V + + ++
Sbjct: 78 AGQERFRTITQSYYRSANGVLIVYDITKRSTFLSLQRWIDE----VRRYTASNVMIFVIG 133
Query: 576 NK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NK D+ +E + + ++I E F ETSAKDN +DDA TL ++ K +
Sbjct: 134 NKSDLDEEREVEFSEAENLCQYIPEVMFV--METSAKDNRCVDDAFMTLATEL----KRR 187
Query: 634 ANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+G + A E +L ++ + N N C
Sbjct: 188 HDGLNAAEEEEGITLGQSKSLSTNTCNSLC 217
>gi|383852599|ref|XP_003701814.1| PREDICTED: uncharacterized protein LOC100884103 [Megachile
rotundata]
Length = 739
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 97/167 (58%), Gaps = 13/167 (7%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LV+G+ GKT I+ RY + + Y +TIG+DF K+++ D T I+LQ+WD AGQ
Sbjct: 9 YKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKIINLDG-TPIKLQIWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +++DVT +F+ + W +++ + + + VL ANKC
Sbjct: 68 ERFRTLTTAYYRGAMGILLMYDVTSLESFNHLSYWLRNIQENAS----SDVVKVLAANKC 123
Query: 579 DQPKEGI--ANNPAKIDEFIKEHNFSG-WFETSAKDNINIDDAAKTL 622
D A KI E NF +FE S K+NINI++A TL
Sbjct: 124 DATAHRAVDAERGMKIAE-----NFDMPFFEVSCKENINIEEAFLTL 165
>gi|426239405|ref|XP_004013612.1| PREDICTED: ras-related protein Rab-7b-like [Ovis aries]
Length = 200
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAK-TIPMEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 128 LADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRAL 172
>gi|348550975|ref|XP_003461306.1| PREDICTED: ras-related protein Rab-3D-like [Cavia porcellus]
Length = 363
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 164 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 222
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +V+D+ +F AV W + K D + +L+
Sbjct: 223 AGQERYRTITTAYYRGAMGFLLVYDIANQESFTAVQDWATQI--KTYSWDNAQV--ILVG 278
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + PA+ + + +FE SAK+NIN+ + LV I E
Sbjct: 279 NKCDLEDERVV--PAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICE 329
>gi|357132966|ref|XP_003568099.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD +N+++A +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 115 bits (287), Expect = 9e-23, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++ L K++V+G+ G GKTS++ +YV++ FS Y+ATIG DF K L D + ++ LQ+W
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVD-DKLVTLQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+DV TFD + W D + + + P VL
Sbjct: 67 DTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVL 126
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
L NK D K E+ +FETSAK+ N+DDA + + END
Sbjct: 127 LGNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVASEND-- 184
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
H ++ E + NCAC
Sbjct: 185 ------HDLDIYFRGISETPSEAEQRSNCAC 209
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 107/175 (61%), Gaps = 15/175 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K+L+IG+ G GK+ ++ R+ F+P + TIG+DF ++ + + + I +LQ+WD
Sbjct: 16 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI-KLQIWDT 74
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+DVT +F + W ++++ T + +L+
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT----ESVNKMLIG 130
Query: 576 NKCDQPKEGIANNP---AKIDEF-IKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD P++ + ++ A DE+ IK + ETSAK++IN+++A +L + I
Sbjct: 131 NKCDLPEKKVVDSSRGKALADEYGIK------FLETSAKNSINVEEAFISLAKDI 179
>gi|3914558|sp|Q41640.1|RAB7_VIGAC RecName: Full=Ras-related protein Rab7
gi|414842|gb|AAA34242.1| Rab7p [Vigna aconitifolia]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A + +DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|74005898|ref|XP_848668.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Canis lupus
familiaris]
Length = 200
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAK-TIPMEPSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL-------VQKILEN 629
+ A+ + KE + +FE SAK++IN+ A + L Q ILEN
Sbjct: 128 LADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRALSRYQSILEN 181
>gi|307204727|gb|EFN83308.1| Ras-related protein Rab-7a [Harpegnathos saltator]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 108/178 (60%), Gaps = 5/178 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIR 509
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K V+ D I+
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDR--IVT 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+Q+WD AGQERF ++ +Y+ A +VFDV+ +F ++ W+ + + + D +
Sbjct: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNF 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P V+L NK D +++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 119 PFVVLGNKVDLESRAVSSKRAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 11/204 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F +V+ D + + + Q+WD
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA IV+D++R +TFD+V +W LD T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRW---LDELKTHSD-TTVAMMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 126 NKCDL--ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVL 183
Query: 635 NGDSHATSEAVFSLNRNSQETKNG 658
N D++ +A S+NR S G
Sbjct: 184 NSDTY---KAELSVNRVSLVNNGG 204
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 15/175 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHET-IIRLQLWD 514
++LYKI++IGE G GK++++ R+ F P R+TIGV+FA + S HE +IR Q+WD
Sbjct: 7 DYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATR--SIQHEQKVIRAQIWD 64
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVL 573
AGQER+ +T YY+ AVGA IV+D+T+ ++F ++ +W +L + +P I ++
Sbjct: 65 TAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELK-----DNADPKIVVMV 119
Query: 574 LANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ NK D Q +E + + AK E+ +FETSA D N++ A K L+ +I
Sbjct: 120 VGNKADLSQTRE-VDESTAKT---FCENQKLFFFETSALDGTNVETAFKNLLIEI 170
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/173 (35%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T TFD ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + + + + +EH + ETSAK N NI+ A L + IL+
Sbjct: 122 NKCDMEDKRVVSK-ERGEAIAREHGIR-FMETSAKSNTNIERAFSELAEAILD 172
>gi|348551446|ref|XP_003461541.1| PREDICTED: ras-related protein Rab-7a-like [Cavia porcellus]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 108/186 (58%), Gaps = 12/186 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV + TFD + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG------WFETSAKDNINIDDAAKTLVQ 624
V+L NK D + A+ K + G F+TSAK+++N+DDA +T+ +
Sbjct: 120 FVVLGNKVD-----VEGGKARQVSEKKAKQWCGAKGGIPHFDTSAKEDLNVDDAFQTIAR 174
Query: 625 KILEND 630
L+N+
Sbjct: 175 NALKNE 180
>gi|187607630|ref|NP_001119836.1| ras-related protein Rab-7a [Ovis aries]
gi|184191121|gb|ACC76773.1| RAS oncogene family-like 7A [Ovis aries]
gi|385281368|gb|AFI57836.1| ras-related protein Rab-7A [Capra hircus]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E+L+KI+VIG+ GK++++ RY FS + +ATIGV+F + + + + + + Q+W
Sbjct: 8 REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV-KAQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ AVGA +V+D+TR TF++V +W +L + + +L
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDEL----KIHSDTTVARML 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKV 632
+ NKCD E I + + + E + ETSA D+ N+ A + ++ I N +
Sbjct: 123 VGNKCDL--ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 180
Query: 633 QANGDSH 639
Q N D++
Sbjct: 181 QLNSDTY 187
>gi|391344946|ref|XP_003746755.1| PREDICTED: ras-related protein Rab-35-like [Metaseiulus
occidentalis]
Length = 203
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GK+S++ R+ FS +Y TIGVDF ++ + D E + +LQ+WD
Sbjct: 5 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGNYITTIGVDFKIRTIEVDGERV-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ G +V+DVT +F V +W ++D + + +L+
Sbjct: 64 AGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIDQNCDV-----VNRILVG 118
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D P+ + F N FETSAKDN N+++ + + +L+ K +
Sbjct: 119 NKNDDPQRKVVLT-EDAQAFADRMNIE-LFETSAKDNFNVEEMFNAVTRMVLKTKKEELR 176
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNC 661
D+ TS+ R +Q+ K G C
Sbjct: 177 -DNLMTSKNDNVRLRKNQKGKKGSKC 201
>gi|50979156|ref|NP_001003316.1| ras-related protein Rab-7a [Canis lupus familiaris]
gi|131797|sp|P18067.1|RAB7A_CANFA RecName: Full=Ras-related protein Rab-7a
gi|164058|gb|AAA30890.1| GTP-binding protein (rab7) [Canis lupus familiaris]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 115 bits (287), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 15/220 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +FD V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD K + + AK EF +N + ETSA D+ N+++A T+ ++I E+
Sbjct: 116 KLLVGNKCDLNDKRVVEYDVAK--EFADANNMP-FLETSALDSTNVEEAFLTMARQIKES 172
Query: 630 ---DKVQ--ANGDSHATSE-AVFSLNRNSQETKNGRNCAC 663
K+Q ANG + + A ++N N Q N + C
Sbjct: 173 MAQQKLQNGANGQAGNNQQNANKNVNLNGQSLTNQSSGCC 212
>gi|357132958|ref|XP_003568095.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD +N+++A +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++ ++ ++L+KI++IG+ G GK++I+ R+ F ++TIGV+FA + L D +T+ +
Sbjct: 4 RVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV-K 62
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +VFD+T+ TFD V +W ++L D N I
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDH---ADAN-I 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D + + P + + E + ETSA + IN++ A T++ +I
Sbjct: 119 VVMMVGNKSDLNH--LRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEI 173
>gi|13027392|ref|NP_076440.1| ras-related protein Rab-7a [Rattus norvegicus]
gi|1710001|sp|P09527.2|RAB7A_RAT RecName: Full=Ras-related protein Rab-7a; AltName: Full=Ras-related
protein BRL-RAS; AltName: Full=Ras-related protein p23
gi|51247924|pdb|1VG0|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With Monoprenylated Rab7 Protein
gi|51247926|pdb|1VG8|A Chain A, Gppnhp-Bound Rab7
gi|51247927|pdb|1VG8|B Chain B, Gppnhp-Bound Rab7
gi|51247928|pdb|1VG8|C Chain C, Gppnhp-Bound Rab7
gi|51247929|pdb|1VG8|D Chain D, Gppnhp-Bound Rab7
gi|9837359|gb|AAG00543.1|AF286535_1 GTP-binding protein RAB7 [Rattus norvegicus]
gi|505565|emb|CAA31053.1| unnamed protein product [Rattus rattus]
gi|47938948|gb|AAH72470.1| RAB7A, member RAS oncogene family [Rattus norvegicus]
gi|71891601|dbj|BAE16999.1| RAB7 [Rattus norvegicus]
gi|71891603|dbj|BAE17000.1| RAB7 [Rattus norvegicus]
gi|149036684|gb|EDL91302.1| RAB7, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 207
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L DH ++ + Q+
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+TR +FD + +W +L A D N I +
Sbjct: 65 WDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAH---ADKN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D + + ++ AK EF ++ N + ETSA N++ A +T++ +I
Sbjct: 121 LVGNKSDLEEQRAVSTEDAK--EFAEKENLF-FLETSALQATNVESAFQTVLTEIF 173
>gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aedes aegypti]
gi|108880990|gb|EAT45215.1| AAEL003503-PA [Aedes aegypti]
Length = 208
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 120/224 (53%), Gaps = 27/224 (12%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ GKTS++ +YV + FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MATRKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVID-DRVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D T TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN- 629
V+L NK D ++ A+ ++ + N +FETSAK+ IN+D A +T+ + L
Sbjct: 120 FVVLGNKIDLENRAVSTKRAQ--QWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQE 177
Query: 630 ----------DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D+++ N D RN++ +NG NC+C
Sbjct: 178 SEVELYNEFPDQIKLNAD------------RNNRP-RNGDNCSC 208
>gi|440793724|gb|ELR14900.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 205
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 106/179 (59%), Gaps = 6/179 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+R L K++++G+ G GKTS++ RYV++ +S Y+ATIG DF K + D + ++ LQ+W
Sbjct: 3 QRRALLKVILLGDSGVGKTSLMDRYVNKKYSAQYKATIGADFLTKEVEVDGK-LVTLQIW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +VFDVT A +F+++ W+ + + + P V+
Sbjct: 62 DTAGQERFQSLGNSFYRGADCCILVFDVTVAKSFESLDNWRNEFLVQAAVGGPEHFPFVV 121
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD----AAKTLVQKILE 628
L NK DQ + + + + + +EH ++ETSAKD N+D AAK + +I E
Sbjct: 122 LGNKVDQEDKRTVSARSG-NAWCREHGDVPFYETSAKDATNVDQAFFMAAKLAISRIPE 179
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP K++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + + +
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVT-V 281
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F+++ WK++ + + D + P
Sbjct: 282 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFP 341
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEH-NFSGWFETSAKDNINIDDAAKTLVQKILEN 629
V++ NK D+ +E + +K + F ++ N +FETSAK N+ A + + ++ +
Sbjct: 342 FVVVGNKVDE-REKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 400
Query: 630 DKVQ 633
+K Q
Sbjct: 401 EKQQ 404
>gi|167382616|ref|XP_001736187.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901348|gb|EDR27431.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 5/173 (2%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KIL++G+ G GKT+I++RY + F Y +TIGVDF +L+ T+ +LQ+WD
Sbjct: 7 DFLFKILIVGDSGVGKTAILQRYCNNTFDERYVSTIGVDFKPMILNLGERTV-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF N+T Y++ IV+DV + V W +++ K T P NP+ L+
Sbjct: 66 AGQERFMNITAAYFRNTTAVIIVYDVNNRESLSKVYSWYGEVNEKTTQP--NPVI-FLVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D+ + + N K N E SAKDNI I + +LV ILE
Sbjct: 123 NKKDENSDSLINIEEAKSIASKLGNIKV-MECSAKDNIGIKELFGSLVDTILE 174
>gi|365985618|ref|XP_003669641.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
gi|343768410|emb|CCD24398.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
Length = 208
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 113/185 (61%), Gaps = 8/185 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K ++ D + I +
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTIDDDKIATM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQD--LDAKVTLPDGNP 568
Q+WD AGQERF ++ +Y+ A +V+DVT A +F+ + W+ + + A ++ P+
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLIHANISTPE--T 118
Query: 569 IPCVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
P V+L NK D + K+ +++N A E K F TSAKD+INI++A + + +
Sbjct: 119 FPFVILGNKIDVEESKKIVSSNSAT--ELAKSLGDIPLFFTSAKDSINIENAFEEIARSA 176
Query: 627 LENDK 631
L+ ++
Sbjct: 177 LQQNQ 181
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN+D A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNSIPYFETSAKEAINVDQAFQTIARNALKQE 177
>gi|148707755|gb|EDL39702.1| RIKEN cDNA 5430435G22, isoform CRA_a [Mus musculus]
Length = 220
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 31 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 89
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 90 RFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-IPMEQSYPMVVLGNKID 148
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
++ + + KE + +FE SAK++IN+ A + L + L + Q ++H
Sbjct: 149 LEDRKVSQEV--VHGWCKEKDMP-YFEVSAKNDINVVQAFEVLASRALL--RYQGTAENH 203
>gi|34147513|ref|NP_004628.4| ras-related protein Rab-7a [Homo sapiens]
gi|148747526|ref|NP_033031.2| ras-related protein Rab-7a [Mus musculus]
gi|126336249|ref|XP_001366922.1| PREDICTED: ras-related protein Rab-7a-like [Monodelphis domestica]
gi|296225983|ref|XP_002758722.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Callithrix
jacchus]
gi|296225985|ref|XP_002758723.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Callithrix
jacchus]
gi|301764537|ref|XP_002917684.1| PREDICTED: ras-related protein Rab-7a-like [Ailuropoda melanoleuca]
gi|332261783|ref|XP_003279946.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Nomascus
leucogenys]
gi|332817831|ref|XP_526302.3| PREDICTED: ras-related protein Rab-7a isoform 3 [Pan troglodytes]
gi|395516722|ref|XP_003762536.1| PREDICTED: ras-related protein Rab-7a [Sarcophilus harrisii]
gi|395847153|ref|XP_003796248.1| PREDICTED: ras-related protein Rab-7a [Otolemur garnettii]
gi|397518563|ref|XP_003829454.1| PREDICTED: ras-related protein Rab-7a [Pan paniscus]
gi|403268248|ref|XP_003926190.1| PREDICTED: ras-related protein Rab-7a [Saimiri boliviensis
boliviensis]
gi|410037454|ref|XP_003950229.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Pan troglodytes]
gi|410037456|ref|XP_003950230.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Pan troglodytes]
gi|410951826|ref|XP_003982594.1| PREDICTED: ras-related protein Rab-7a-like [Felis catus]
gi|426342010|ref|XP_004036309.1| PREDICTED: ras-related protein Rab-7a-like [Gorilla gorilla
gorilla]
gi|441665150|ref|XP_004091796.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Nomascus
leucogenys]
gi|1709999|sp|P51149.1|RAB7A_HUMAN RecName: Full=Ras-related protein Rab-7a
gi|46397834|sp|P51150.2|RAB7A_MOUSE RecName: Full=Ras-related protein Rab-7a
gi|20379060|gb|AAM21090.1|AF498942_1 small GTP binding protein RAB7 [Homo sapiens]
gi|1089893|emb|CAA63763.1| RAB7 protein [Homo sapiens]
gi|12836622|dbj|BAB23738.1| unnamed protein product [Mus musculus]
gi|13435456|gb|AAH04597.1| RAB7, member RAS oncogene family [Mus musculus]
gi|33870783|gb|AAH08721.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|56269740|gb|AAH86793.1| RAB7, member RAS oncogene family [Mus musculus]
gi|60688670|gb|AAH13728.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|71060033|emb|CAJ18560.1| Rab7 [Mus musculus]
gi|74143376|dbj|BAE24180.1| unnamed protein product [Mus musculus]
gi|74178374|dbj|BAE32452.1| unnamed protein product [Mus musculus]
gi|74185227|dbj|BAE30093.1| unnamed protein product [Mus musculus]
gi|74186523|dbj|BAE34750.1| unnamed protein product [Mus musculus]
gi|74195255|dbj|BAE28355.1| unnamed protein product [Mus musculus]
gi|74213341|dbj|BAE35490.1| unnamed protein product [Mus musculus]
gi|74220348|dbj|BAE31401.1| unnamed protein product [Mus musculus]
gi|112292967|dbj|BAF02861.1| Rab7 [Mus musculus]
gi|119599708|gb|EAW79302.1| RAB7, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148666823|gb|EDK99239.1| mCG130610 [Mus musculus]
gi|168277952|dbj|BAG10954.1| Ras-related protein Rab-7a [synthetic construct]
gi|355564540|gb|EHH21040.1| hypothetical protein EGK_04016 [Macaca mulatta]
gi|355786382|gb|EHH66565.1| hypothetical protein EGM_03582 [Macaca fascicularis]
gi|380785041|gb|AFE64396.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380785043|gb|AFE64397.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816414|gb|AFE80081.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816416|gb|AFE80082.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410517|gb|AFH28472.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410519|gb|AFH28473.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421483|gb|AFH33955.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421485|gb|AFH33956.1| ras-related protein Rab-7a [Macaca mulatta]
gi|384949354|gb|AFI38282.1| ras-related protein Rab-7a [Macaca mulatta]
gi|410226154|gb|JAA10296.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|410226162|gb|JAA10300.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|417397111|gb|JAA45589.1| Putative ras-related protein rab-7a [Desmodus rotundus]
gi|431913713|gb|ELK15203.1| Ras-related protein Rab-7a [Pteropus alecto]
gi|432103477|gb|ELK30581.1| Ras-related protein Rab-7a [Myotis davidii]
gi|444512838|gb|ELV10180.1| Ras-related protein Rab-7a [Tupaia chinensis]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++ L K++V+G+ G GKTS++ +YV++ FS Y+ATIG DF K L D + ++ LQ+W
Sbjct: 8 RKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVD-DKLVTLQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+DV TFD + W D + + + P VL
Sbjct: 67 DTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPDAFPFVL 126
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
L NK D K E+ +FETSAK+ N+DDA + + END
Sbjct: 127 LGNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVASENDH- 185
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D +F E + NCAC
Sbjct: 186 ----DLDIYFRGIF---ETPSEAEQRSNCAC 209
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP K++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + + +
Sbjct: 223 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVT-V 281
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F+++ WK++ + + D + P
Sbjct: 282 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFP 341
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEH-NFSGWFETSAKDNINIDDAAKTLVQKILEN 629
V++ NK D+ +E + +K + F ++ N +FETSAK N+ A + + ++ +
Sbjct: 342 FVVVGNKVDE-REKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 400
Query: 630 DKVQ 633
+K Q
Sbjct: 401 EKQQ 404
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|1050551|emb|CAA61797.1| rab7 [Mus musculus]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYRKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|403333494|gb|EJY65848.1| Rab GTPase 2b [Oxytricha trifallax]
Length = 604
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 125/222 (56%), Gaps = 20/222 (9%)
Query: 447 PYSKMPDK----REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW 502
PYS + DK +++L+K+++IG+ G GK+ ++ R + F ++ TIGV+F V+
Sbjct: 377 PYSVISDKALNHQDYLFKLIIIGDTGVGKSCLLARIMDNEFKIEHQVTIGVEFGSFVIKM 436
Query: 503 DHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT 562
+ E I++LQ+WD AGQE F ++TR++Y+ A F+ +D+TR TF V+ W +++
Sbjct: 437 E-EKIVKLQIWDTAGQESFRSITRIFYRGAHCVFLTYDITRDDTFVNVIDWLKEIKQHAN 495
Query: 563 LPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD----A 618
+ I L+ N+CD + I EF K+++ +FETSAK N+++ A
Sbjct: 496 ----SDIVIYLIGNRCDLEDDREVTRERAI-EFCKQYSIDKFFETSAKTGDNVEEVFSLA 550
Query: 619 AKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRN 660
AK L L++ +VQ D T+E V N+ TK G+N
Sbjct: 551 AKELY---LQSKEVQPEDDE--TNEDV-KDNKEKDNTKKGKN 586
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 105/176 (59%), Gaps = 9/176 (5%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD A
Sbjct: 15 LLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDTA 73
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERF +T YY+ A G +V+D+T+ TFD + KW ++++ + + +L+ N
Sbjct: 74 GQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHAS----EDVERMLIGN 129
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
KCD + K I+ + + E N +FETSAK+NINI+ A +L + IL +
Sbjct: 130 KCDMEDKRLISEERGRK---VAEENGIKFFETSAKENINIEIAFNSLAEDILNKQR 182
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ +S Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ESVN 115
Query: 571 CVLLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD K+ + AK E+ N + ETSAK+N N++ A T+ +I
Sbjct: 116 KLLVGNKCDMTTKKVVDYTTAK--EYADSLNIP-FLETSAKNNTNVEQAFLTMASEI 169
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 8/187 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E+L+KI+VIG+ GK++++ RY FS + +ATIGV+F + + + + + + Q+W
Sbjct: 8 REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV-KAQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ AVGA +V+D+TR TF++V +W LD ++ + + +L
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRW---LD-QLKIHSDTTVARML 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKV 632
+ NKCD E I + + + E + ETSA D+ N+ A + ++ I N +
Sbjct: 123 VGNKCDL--ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 180
Query: 633 QANGDSH 639
Q N D++
Sbjct: 181 QLNSDTY 187
>gi|326505594|dbj|BAJ95468.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533112|dbj|BAJ93528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQYE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D I +++ + E W FETSAK+ N++DA +
Sbjct: 120 FVLLGNKVD-----IDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKDALKNE 180
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDI 170
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L DH ++ + Q+
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+TR +FD + +W +L A D N I +
Sbjct: 65 WDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAH---ADKN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D + + ++ AK EF ++ N + ETSA N++ A +T++ +I
Sbjct: 121 LVGNKSDLEEQRAVSTEDAK--EFAEKENLF-FLETSALQATNVESAFQTVLTEIF 173
>gi|15219943|ref|NP_173688.1| Ras-related protein Rab7 [Arabidopsis thaliana]
gi|3914521|sp|O04157.1|RAG3B_ARATH RecName: Full=Ras-related protein RABG3b; Short=AtRABG3b; AltName:
Full=Ras-related protein Rab75; Short=AtRab75
gi|2065015|emb|CAA70951.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|2505866|emb|CAA72904.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|3287684|gb|AAC25512.1| Strong similaity to gb|Y09821 GTP-binding protein Rab7 from A.
thaliana. EST gb|T76449 comes from this gene
[Arabidopsis thaliana]
gi|15718416|dbj|BAB68375.1| AtRab75 [Arabidopsis thaliana]
gi|88193796|gb|ABD42987.1| At1g22740 [Arabidopsis thaliana]
gi|332192158|gb|AEE30279.1| Ras-related protein Rab7 [Arabidopsis thaliana]
Length = 203
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 103/184 (55%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +F+++ W + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K E+ E +FETSAK++ N+DD+ + + L N
Sbjct: 120 FILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALAN 179
Query: 630 DKVQ 633
++ Q
Sbjct: 180 ERDQ 183
>gi|335295290|ref|XP_003357460.1| PREDICTED: ras-related protein Rab-7b-like [Sus scrofa]
Length = 200
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAK-TIPMEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 128 LADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLAGRAL 172
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 108/177 (61%), Gaps = 19/177 (10%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++ G+ G GK++++ R+ F R TIGV+FA + + + +++ Q+WD
Sbjct: 10 DYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVA-DKLVKTQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQERF +T YY+ A+GA +V+D+TR ATFD + KW ++L GNP + +L+
Sbjct: 69 AGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELR-----EFGNPEMVIILV 123
Query: 575 ANKCD-----QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD + +E A + A+++ + ETSAKDN+N+++A +V++I
Sbjct: 124 GNKCDLHQSREVQEEEARHLAELENLF-------FMETSAKDNLNVEEAFLEMVRRI 173
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 119/214 (55%), Gaps = 10/214 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF + + D + +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVT-M 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +VFDV A +FDA+ W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK-ILEN 629
V+L NK D + + + F + +FETSAK+ IN+++A + + + +++
Sbjct: 120 FVVLGNKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQE 179
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + +GD +N + + ++G CAC
Sbjct: 180 ESEEFSGDFQD------PINIHIENERDG--CAC 205
>gi|449543332|gb|EMD34308.1| hypothetical protein CERSUDRAFT_117186 [Ceriporiopsis subvermispora
B]
Length = 204
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 107/179 (59%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MPD ++L+K+L+IG+ G GK+ ++ R+ F+ Y +TIGVDF ++ + + + +++L
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGK-MVKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF + YY+ A G +V+DVT +F V W Q++D + +
Sbjct: 60 QIWDTAGQERFRTIAAAYYRGAHGIVVVYDVTDNDSFANVKGWLQEIDRYAS----EGVK 115
Query: 571 CVLLANKCDQPKEGIAN-NPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+LL NK D + + + N AK EF E + ETSAK++ N+++A T+ ++I E
Sbjct: 116 KLLLGNKSDLVERKVVDYNTAK--EFADELQIP-FIETSAKNSTNVEEAFVTMSKQIKE 171
>gi|403417830|emb|CCM04530.1| predicted protein [Fibroporia radiculosa]
Length = 219
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 119/207 (57%), Gaps = 9/207 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MPD ++L+K+L+IG+ G GK+ ++ R+ F+ Y +TIGVDF ++ + + + +++L
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGK-MVKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF + YY+ A G +V+DVT A +FD V W Q+++ + +
Sbjct: 60 QIWDTAGQERFRTIAAAYYRGAHGIVVVYDVTDAESFDNVKGWLQEIERYAS----ENVK 115
Query: 571 CVLLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK D ++ +A AK EF E + ETSAK + N+++A T+ ++I E+
Sbjct: 116 KLLIGNKSDLVERKVVAYGSAK--EFADELAIP-FIETSAKTSSNVEEAFLTMSKQIKES 172
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETK 656
+ ++A+ + R +E K
Sbjct: 173 VDIAPEPAANASKAGTVTPGRGLEEQK 199
>gi|354467588|ref|XP_003496251.1| PREDICTED: ras-related protein Rab-3C-like [Cricetulus griseus]
Length = 228
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 29 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 87
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 88 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 143
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E I + + + E +FETSAKDNIN+ + LV I +
Sbjct: 144 NKCDMEDERIISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 194
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 19/218 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+ + Q+WD
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV-KAQIWDT 76
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N I +L
Sbjct: 77 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN-IVIILTG 132
Query: 576 NKCD-QPKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQKI------- 626
NKCD + + + AK EF KE F + ETSA + N++ A T++ +I
Sbjct: 133 NKCDLENQRDVPTGDAK--EFAEKEGLF--FLETSALEATNVETAFITVLTEIYNIVNKK 188
Query: 627 -LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
L D+ Q NG+S + S + +QE RN C
Sbjct: 189 NLTADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 122/218 (55%), Gaps = 19/218 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+ + Q+WD
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV-KAQIWDT 76
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N I +L
Sbjct: 77 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN-IVIILTG 132
Query: 576 NKCD-QPKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQKI------- 626
NKCD + + + AK EF KE F + ETSA + N++ A T++ +I
Sbjct: 133 NKCDLENQRDVPTEDAK--EFAEKEGLF--FLETSALEATNVETAFITVLTEIYNIVNKK 188
Query: 627 -LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
L D+ Q NG+S + S + +QE RN C
Sbjct: 189 NLTADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCC 226
>gi|354482839|ref|XP_003503603.1| PREDICTED: ras-related protein Rab-7a-like [Cricetulus griseus]
gi|344253367|gb|EGW09471.1| Ras-related protein Rab-7a [Cricetulus griseus]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|198419776|ref|XP_002131191.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 185
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 7/169 (4%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++VIG+ G GKTS+++R+ FS ++ ATIG+DF ++ + E +I++Q+WD AGQE
Sbjct: 14 KLVVIGDSGVGKTSVMRRFTDNEFSFNFVATIGIDFKVRTIKVK-EKMIKVQIWDTAGQE 72
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF ++T YY+ A G IV+D+T +F V W + + G+ + +L+ NKCD
Sbjct: 73 RFRSITTAYYRGAKGVIIVYDITSLKSFSHVNNWVINFNRWA----GDDVQALLVGNKCD 128
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+ + A ++ KEH + ETSAKD N+D A +++KI+E
Sbjct: 129 LEDQRVVTKMAG-EKLAKEHGME-FSETSAKDCTNVDIAFMRILEKIVE 175
>gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sativa Indica Group]
Length = 206
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + + +++ + E W FETSAKD N+++A +
Sbjct: 120 FVLLGNKVD-----VDSGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 105/181 (58%), Gaps = 17/181 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+ ++ R+ ++P Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYAT----GGVM 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D + KI E+ F+ + ETSA + N++ A T+ ++
Sbjct: 116 KLLVGNKADLSDK-------KIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
Query: 626 I 626
I
Sbjct: 169 I 169
>gi|358055191|dbj|GAA98960.1| hypothetical protein E5Q_05648 [Mixia osmundae IAM 14324]
Length = 753
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 101/177 (57%), Gaps = 1/177 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L KI+++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKIIILGDSGVGKTSLMGQFVNKRFSNQYKATIGADFLTKEVMID-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV A +F+ + W+ + + + D + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++L NK D + K + + +FETSAK+ IN++ A + + L
Sbjct: 120 FIVLGNKIDMEDSKRVVSQKKAMTWCQAKGGIPYFETSAKEAINVEQAFQAACKGAL 176
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 118/197 (59%), Gaps = 11/197 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+ H +ATIGV+F + + D + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D++R +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD + I P + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 126 NKCDL--DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
Query: 635 NGDSHATSEAVFSLNRN 651
N DS+ +A SLNR+
Sbjct: 184 NSDSY---KAELSLNRD 197
>gi|156086828|ref|XP_001610821.1| Rab2 [Babesia bovis T2Bo]
gi|32492052|gb|AAP85298.1| Rab2 [Babesia bovis]
gi|154798074|gb|EDO07253.1| Rab2 [Babesia bovis]
Length = 217
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 14/203 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ R+ + F P + TIGV+F ++++ +TI +LQ+WD
Sbjct: 5 KYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRLINVKGDTI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +VFD++R +TF+ + +W ++ G+P + VL+
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTRWLDEVKDH-----GSPTMTIVLI 118
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
NK D K + + K F E+N + ETSAK + N+++A T I +N
Sbjct: 119 GNKTDVNKREVEYHEGK--AFADENNLI-YMETSAKGDYNVEEAFLTTATMIYDN----V 171
Query: 635 NGDSHATSEAVFSLNRNSQETKN 657
N V+ + + Q T N
Sbjct: 172 NRGMFDVDSGVYGVKKGPQATVN 194
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 10/178 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI+VIG+ G GK+S++ R+ +S Y +TIGVDF +K + D+ T I+LQ+WD
Sbjct: 5 DYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTT-IKLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCVLL 574
AGQERF +T YY+ A G V+DVT +FD + + W QD+D T + + +L+
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYAT----SNVCKLLI 119
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NK D + A + + E N + E SAK + N++ A T+ + + DKV
Sbjct: 120 GNKIDLVDSRVV--LADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKAL--KDKV 173
>gi|328716995|ref|XP_001945306.2| PREDICTED: ras-related protein Rab-30-like [Acyrthosiphon pisum]
Length = 201
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 102/175 (58%), Gaps = 8/175 (4%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
FL+K++++G G GKT +++R+ F P ATIGVDF +K + D+E + +LQ+WD A
Sbjct: 6 FLFKVVLVGNAGVGKTCLVRRFTQGMFPPGQGATIGVDFMIKTIEIDNEKV-KLQIWDTA 64
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERF ++T+ YY+ A +++D+T TFD + W +++D N + VL+ N
Sbjct: 65 GQERFRSITQSYYRSAHALILIYDITSQPTFDCLNDWLREIDEYAN----NRVLRVLVGN 120
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
K D+ I ++ + +F + H+ + ETSAK N++ + +++E K
Sbjct: 121 KIDKEDREIPSHVGQ--DFAQRHDMR-YLETSAKQADNVEKLFVQIASELMEQAK 172
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 114/218 (52%), Gaps = 24/218 (11%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
++ L KI+V+G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ LQ+W
Sbjct: 6 RKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVD-DKLVTLQIW 64
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+DV TFD + W + + + D P VL
Sbjct: 65 DTAGQERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPEAFPFVL 124
Query: 574 LANKCDQPKEGIANNPAKIDE-----FIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
L NK D N ++ E + +FETSAK+ N+++A + + LE
Sbjct: 125 LGNKVDVD----GGNSRRVTEKKARDWCASRGNIPYFETSAKEGYNVEEAFLCVAKIALE 180
Query: 629 NDKVQA---NGDSHATSEAVFSLNRNSQETKNGRNCAC 663
N+ Q G S A SEA E ++G CAC
Sbjct: 181 NEHDQDIYFRGISEAVSEA---------EQRSG--CAC 207
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 10/173 (5%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
D ++ YKI++IG+ G GKT+I+ ++ FS + T+GV+FA K L D + II+ Q
Sbjct: 4 SDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVID-DKIIKAQ 62
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWD AGQER+ + YYK A GA IVFD+T+ +TFD V +W KV N I
Sbjct: 63 LWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRW-----MKVQESTSNEISI 117
Query: 572 VLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
+L+ NK D + ++++ + + +H + + ETSAKD N+++A L+
Sbjct: 118 ILVGNKSDLRHLRQVSSDVSS--AYASKHKIA-FLETSAKDGANVNEAFNKLI 167
>gi|449268202|gb|EMC79072.1| Ras-related protein Rab-3B [Columba livia]
Length = 219
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITSEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E I P + + + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDMEDERIV--PVEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICE 185
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 113/202 (55%), Gaps = 20/202 (9%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M ++L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF ++ + D + I
Sbjct: 2 SSMAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + +
Sbjct: 61 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SD 116
Query: 569 IPCVLLANKCD----QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
+ ++L NKCD + + ++ IK + ETSAK NIN+++A TL +
Sbjct: 117 VEKMVLGNKCDINDKRQVTKMGGEKLALEYGIK------FMETSAKSNINVENAFLTLAR 170
Query: 625 KI--LENDKVQAN---GDSHAT 641
I + K++ N G SH
Sbjct: 171 DIKTKMDSKLEGNAPQGSSHGV 192
>gi|145499484|ref|XP_001435727.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833683|emb|CAI39321.1| rab_A66 [Paramecium tetraurelia]
gi|74833851|emb|CAI39378.1| rab_B66 [Paramecium tetraurelia]
gi|124402862|emb|CAK68330.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 8/181 (4%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
S K D + L K+L+IG G GKT I+ RY F + +TIG+DF +K +S D E
Sbjct: 3 SLVKKSKDTCDLLIKVLLIGNSGVGKTQILLRYTENQFKTSFLSTIGIDFKIKKISVD-E 61
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
+I++Q+WD AGQER+ +T+ YYK A+G +VF V +F + KW ++ L
Sbjct: 62 KVIKMQIWDTAGQERYQTITQTYYKGAMGIILVFAVNDQESFRDIEKWMN----QIKLHA 117
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ I VL+ NK D P I A ++HN +FETSAK+ NI+ + + +
Sbjct: 118 SDNIIKVLIGNKTDLPDRCITYEDAL--NMAQQHNIP-YFETSAKEGTNINQTFQQIAKL 174
Query: 626 I 626
I
Sbjct: 175 I 175
>gi|156097076|ref|XP_001614571.1| small GTPase Rab7 [Plasmodium vivax Sal-1]
gi|148803445|gb|EDL44844.1| small GTPase Rab7, putative [Plasmodium vivax]
Length = 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 120/212 (56%), Gaps = 7/212 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +K+ + K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K D+E + +
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHL-TM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFD+T T++++ WK + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D+ + K+ ++ K +N +FETSAK+ IN+D A + +K ++
Sbjct: 120 FVIIGNKVDETNKRKV-QSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMK-- 176
Query: 631 KVQANGDSHATSEAVFSL-NRNSQETKNGRNC 661
Q + + F+L N+ Q+ R C
Sbjct: 177 --QEHQEEQIYLPETFALNNQGDQKIYKSRCC 206
>gi|344235947|gb|EGV92050.1| Ras-related protein Rab-3C [Cricetulus griseus]
Length = 220
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 79
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 135
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E I + + + E +FETSAKDNIN+ + LV I +
Sbjct: 136 NKCDMEDERIISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 186
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 19/183 (10%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +++ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCDQ------PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
+LL NKCD PKE + ++ KEH +FETSAK ++N+D++ TL
Sbjct: 116 RMLLGNKCDMENKRKVPKE-------RGEKLAKEHGIR-FFETSAKSSLNVDESFNTLAT 167
Query: 625 KIL 627
IL
Sbjct: 168 DIL 170
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +FD + KW +++D + + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----EDVEKMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD + + + ++ +H + ETSAK NI ID A L + IL+
Sbjct: 122 NKCDMADRRVVSR-ERGEKIANDHGIR-FLETSAKANIQIDKAFYDLAEAILD 172
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 110/190 (57%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVQ 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NKCD + K + A D+ +EH +FETSAK + N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRRVRKEQA--DQLAREHGIR-FFETSAKSSTNVDEAFSSLARDILLK 172
Query: 630 DKVQANGDSH 639
+ +G+SH
Sbjct: 173 SGGRRSGNSH 182
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
SP + P +FL K+L+IG+ G GK+ ++ R+ F+P + ATIG+DF ++ + + +
Sbjct: 3 SPATNKPAAYDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I +LQ+WD AGQERF +T YY+ A+G +V+DVT +F ++ W ++++ +
Sbjct: 63 RI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHAS--- 118
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + +L+ NKCD ++ + ++ ++ E+ + ETSAK+++N+++A L +
Sbjct: 119 -DSVNKMLIGNKCDMTEKKVVDS-SRGKSLADEYGIK-FLETSAKNSVNVEEAFIGLAKD 175
Query: 626 I 626
I
Sbjct: 176 I 176
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 14/216 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L K++++G+ G GKTS+++++V+ FS Y+ATIG DF K L+ D +++ +
Sbjct: 1 MSSKKKTLLKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKELTIDDKSV-TM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DVT +F+ + WK + + + + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKNPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--- 627
V++ NK D + N K +F F+TSAK+ +NID A + + L
Sbjct: 120 FVIIGNKVDVDENKKVINNKKAQQFANNLGNLPLFQTSAKEAVNIDQAFDVIARNALQQE 179
Query: 628 ENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
END+ + ++A+ N Q NCAC
Sbjct: 180 ENDEF-----NDEFNDAI-----NIQLDGENNNCAC 205
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 17/201 (8%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
S Y K ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L+ H+
Sbjct: 3 SGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
++ + Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L A D
Sbjct: 63 SV-KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAH---AD 118
Query: 566 GNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
N I +L+ NK D + + + AK EF ++ + ETSA + N++DA T++
Sbjct: 119 RN-IVIMLIGNKTDLEDQRAVPTEDAK--EFAQKEGLF-FLETSAMEATNLEDAFLTVLT 174
Query: 625 KI--------LENDKVQANGD 637
+I L D Q+NG+
Sbjct: 175 EIFNIVNKKNLAADDNQSNGN 195
>gi|218197104|gb|EEC79531.1| hypothetical protein OsI_20631 [Oryza sativa Indica Group]
Length = 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + + +++ + E W FETSAKD N+++A +
Sbjct: 120 FVLLGNKVD-----VDSGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 84/132 (63%), Gaps = 4/132 (3%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+K YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +T IRLQ
Sbjct: 4 PNKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT-IRLQ 62
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWD AGQERF ++ Y +++ A +V+D+T+ +FD + KW +D+ K + N I C
Sbjct: 63 LWDTAGQERFRSLIPSYIRDSRVAIVVYDITKKKSFDCIDKWIEDV--KNERGEDNVILC 120
Query: 572 VLLANKCDQPKE 583
V + NK D E
Sbjct: 121 V-VGNKSDLTDE 131
>gi|452985489|gb|EME85246.1| hypothetical protein MYCFIDRAFT_61188 [Pseudocercospora fijiensis
CIRAD86]
Length = 205
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +FD + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ + + + F + +FETSAK+ IN++ A + + + L +
Sbjct: 120 FVVLGNKVDREESARVISSKRAMAFCQAKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 631 KVQ 633
+ Q
Sbjct: 180 ESQ 182
>gi|145535806|ref|XP_001453636.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421358|emb|CAK86239.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/181 (36%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y + + ++L+K+L+IG G GK+ ++ R+ F+ H+ TIGVDF +KV D T+
Sbjct: 5 YVQQSSECDYLFKVLLIGNSGVGKSCMLMRFSENQFTNHFYNTIGVDFKIKVFQIDKSTV 64
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+LQ+WD AGQ+RF +T YY+ A G IVFDVT +F+ + +W Q++D K N
Sbjct: 65 -KLQIWDTAGQDRFRTITSSYYRGAQGIIIVFDVTDRESFNQIRQWMQEID-KFAAESVN 122
Query: 568 PIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
I L+ NK D + ++ + A + K ++ S + ETSAK NINI++ + ++I+
Sbjct: 123 KI---LVGNKIDSSQRRVSTDEA--EALAKSYSIS-YIETSAKTNINIENCFSLITRQII 176
Query: 628 E 628
+
Sbjct: 177 Q 177
>gi|432116086|gb|ELK37213.1| Ras-related protein Rab-7b [Myotis davidii]
Length = 199
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G K++ + +T ++LQ+WD GQE
Sbjct: 10 KLIIVGALGVGKTSLLHQYVHKTFFEDYQTTLGASILSKIIILN-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKI-IPTEQSYPMVALGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
+ P + KE N +FE SAK++IN+ A + L + L + N +++
Sbjct: 128 LEDRQVP--PEVAQNWCKEKNIP-YFEVSAKNDINVVQAFEMLASRALSRYR---NTENY 181
Query: 640 ATSEAVFSLNRNSQETKNGRNCA 662
T + S E + GR C
Sbjct: 182 LTDSI-----KLSPEDQTGRRCC 199
>gi|157818725|ref|NP_001102798.1| ras-related protein Rab-7b [Rattus norvegicus]
gi|149058662|gb|EDM09819.1| similar to RAB7-like protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 199
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-VPMEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
+ A E+ KE + +FE SAK++IN+ A + L + L + Q ++H
Sbjct: 128 LEDRKVPQEVAH--EWCKEKDMP-YFEVSAKNDINVVQAFEVLASRALL--RYQGIAENH 182
>gi|50306305|ref|XP_453125.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642259|emb|CAH00221.1| KLLA0D01265p [Kluyveromyces lactis]
Length = 207
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K+ L K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K + + + + +
Sbjct: 1 MSRKKNIL-KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVIVNDDKVATM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT +FD V W+ + + P
Sbjct: 60 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNGKSFDNVKSWRDEFLVHANVSSPETFP 119
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+LANK D + K+ +++ A+ E K F TSAKD+IN+ DA + + + L+
Sbjct: 120 FVILANKVDVEESKKVVSSRSAQ--EQAKSLGNVPLFFTSAKDSINVQDAFEEIARSALQ 177
Query: 629 NDKVQANGDSHATSEAV 645
+ A+ SEA+
Sbjct: 178 QSQSDADAYEDDLSEAI 194
>gi|170058469|ref|XP_001864935.1| ras-related protein Rab [Culex quinquefasciatus]
gi|167877567|gb|EDS40950.1| ras-related protein Rab [Culex quinquefasciatus]
Length = 203
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 105/181 (58%), Gaps = 8/181 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MAREYDHLFKLLIIGDSGVGKSSLLIRFSDNTFSGSYITTIGVDFKIRTVVINGERV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT +F V +W Q++++ + +
Sbjct: 60 QIWDTAGQERFRTITNTYYRGTHGVIVVYDVTNGESFANVKRWLQEIESNCDV-----VN 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D P + D F K+ + FETSAKDN+N+++ + +++L +
Sbjct: 115 KVLVGNKNDDPNRKVVITEDS-DRFAKQMDIQ-LFETSAKDNLNVEEMFLAITEQVLRHK 172
Query: 631 K 631
K
Sbjct: 173 K 173
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 106/181 (58%), Gaps = 17/181 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+S++ R+ ++P Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYAT----GGVM 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D + K+ E+ F+ + ETSA + N++ A T+ ++
Sbjct: 116 KLLVGNKADLSDK-------KVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQ 168
Query: 626 I 626
I
Sbjct: 169 I 169
>gi|154422723|ref|XP_001584373.1| hypothetical protein [Trichomonas vaginalis G3]
gi|62736316|gb|AAX97487.1| small Rab GTPase RabX10 [Trichomonas vaginalis]
gi|121918620|gb|EAY23387.1| hypothetical protein TVAG_070500 [Trichomonas vaginalis G3]
Length = 196
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 103/174 (59%), Gaps = 10/174 (5%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+ L+K+L++GE G GKT ++ R+ F ++ +TIGVDF ++ + D + + +LQ+WD
Sbjct: 4 HDHLFKLLIVGESGVGKTCMLLRFADNSFEENFLSTIGVDFKVREIDVDGKRV-KLQIWD 62
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
AGQERF N+T YY+ G IV+D+TR TF V +W +D+ K+T + +P +L+
Sbjct: 63 SAGQERFRNITTSYYRNCGGIIIVYDITRHDTFTKVTEWIEDV-RKIT----SNVPLLLV 117
Query: 575 ANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D + K + AK E ETSAK +NI+DA K + ++++
Sbjct: 118 GNKADLEDKRAVTEQEAK--ELANRMGLV-LLETSAKTALNIEDAFKQISRQLI 168
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 10/194 (5%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ D ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + L D + +I+
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGK-VIK 67
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVTR ATFD V +W ++L T P I
Sbjct: 68 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDH-TDPS---I 123
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA-AKTLVQ--KI 626
C+L+ NK D + +A + EF + + + ETSA D N+D+A A+ L Q +I
Sbjct: 124 VCMLIGNKSDL-RHLVAVSTEDGKEFAEAESMY-FMETSALDATNVDNAFAEVLTQIYQI 181
Query: 627 LENDKVQANGDSHA 640
+ V+A D A
Sbjct: 182 VNKKPVEAPEDGSA 195
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 116/201 (57%), Gaps = 17/201 (8%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
S Y K ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L H+
Sbjct: 3 SGYGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
++ + Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L A D
Sbjct: 63 SV-KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAH---AD 118
Query: 566 GNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
N I +L+ NK D + + + AK EF ++ + ETSA + N++DA T++
Sbjct: 119 RN-IVIMLIGNKTDLEDQRAVPTEDAK--EFAQKEGLF-FLETSAMEATNVEDAFLTVLT 174
Query: 625 KI--------LENDKVQANGD 637
+I L D+ Q+NG+
Sbjct: 175 EIFNIVNKKNLAADENQSNGN 195
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 108/189 (57%), Gaps = 12/189 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R +TF++V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARW---LDELKTHSD-TTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWF--ETSAKDNINIDDAAKTLVQKILEN-DKV 632
NKCD ++E G F ETSA ++ N+ A + +++ I N +
Sbjct: 125 NKCDLDNM----RAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRK 180
Query: 633 QANGDSHAT 641
Q N D H T
Sbjct: 181 QLNSDMHKT 189
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 113/182 (62%), Gaps = 9/182 (4%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
+ Y++ +K ++++K+++IG+ GK+ ++ R+ FS +ATIGV+F + + DH+
Sbjct: 3 NAYNEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHK 62
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
TI + Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD V +W ++L A D
Sbjct: 63 TI-KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAH---AD 118
Query: 566 GNPIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ 624
N I +L+ NK D + + A+ EF ++ + S + ETSA ++ N++ A T++
Sbjct: 119 AN-IVIMLIGNKSDLSNLRQVETDTAR--EFAEKESLS-FLETSAMESTNVETAFFTVLS 174
Query: 625 KI 626
+I
Sbjct: 175 EI 176
>gi|242058511|ref|XP_002458401.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
gi|241930376|gb|EES03521.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
Length = 206
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 6/183 (3%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIRLQL 512
+R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K VL D ++ LQ+
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDR--LVTLQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++ +Y+ A +V+DV +FD + W + + + D P +
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFI 122
Query: 573 LLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
LL NK D K + ++ ++ + N +FETSAK++ N+D+A T+ + LE++
Sbjct: 123 LLGNKIDVDGGKSRVVSDKKAMEWCASKGNIP-YFETSAKEDYNVDNAFLTVAKLALEHE 181
Query: 631 KVQ 633
+ Q
Sbjct: 182 RDQ 184
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 107/177 (60%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVD 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NKCD + + ++ ++ E+ + + ETSAK NIN+++A TL + I
Sbjct: 116 RMIIGNKCDIEERRQVSRERG--EQLAIEYG-TKFMETSAKANINVEEAFFTLARDI 169
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 20/213 (9%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
SK D+ +FL+KI++IG+ G GKT+++ R+ F+ + TIGV+FA K + +++ I
Sbjct: 3 SKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENK-YI 61
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+ Q+WD AGQE++ +T YY+ AVGA ++D+T+ TFD V KW +L D N
Sbjct: 62 KAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELR---EYADAN- 117
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
I C+L+ NKCD Q + A +F +E+N + + ETSA IN+D A + L+ +I
Sbjct: 118 IICMLIGNKCDLQEMRQVKTEDAA--KFAEENNLA-FMETSAAQAINVDQAFQKLITEIY 174
Query: 628 ENDKVQANGDSHATSEAVFSLNRNSQETKNGRN 660
N K + N + + +Q +NG N
Sbjct: 175 NNLKTRPNEE-----------KKKAQPQQNGNN 196
>gi|344272308|ref|XP_003407975.1| PREDICTED: ras-related protein Rab-3C-like [Loxodonta africana]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|284794146|pdb|3LAW|A Chain A, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794147|pdb|3LAW|B Chain B, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794148|pdb|3LAW|C Chain C, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794149|pdb|3LAW|D Chain D, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794150|pdb|3LAW|E Chain E, Structure Of Gtp-Bound L129f Mutant Rab7
Length = 207
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDFENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|113679535|ref|NP_001038812.1| ras-related protein Rab-43 [Danio rerio]
gi|112419206|gb|AAI22422.1| Zgc:153788 [Danio rerio]
gi|182890198|gb|AAI65016.1| Zgc:153788 protein [Danio rerio]
Length = 208
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + ++KI+++G++G GKT +++R+ F TIGVDF +K L H ++LQ+
Sbjct: 8 DSYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLE-IHGKRVKLQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +T+ YY+ A GA I +D+T+ ATF +V KW +D V G+ I +
Sbjct: 67 WDTAGQERFRTITQSYYRSANGAIITYDITKKATFLSVPKWMED----VKKYGGSNIVPL 122
Query: 573 LLANKCDQ------PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
L+ NKCD P E ++D F ETSAKD+ N+D+A + ++
Sbjct: 123 LIGNKCDLSESREVPLEDAQTMAHQLD-------FVSAIETSAKDSSNVDEAFNKMASEL 175
Query: 627 L 627
+
Sbjct: 176 I 176
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 13/199 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + L D + + + Q+WD
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA IV+D++R TFD+V +W +L + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCD----TTVAMMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWF--ETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD E I IDE G F ETSA D+ N+ A + ++++I N V
Sbjct: 126 NKCDL--ENI--RAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNN--VS 179
Query: 634 ANGDSHATSEAVFSLNRNS 652
+ T +A S+NR S
Sbjct: 180 RKVLNSETYKAELSVNRVS 198
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + + +EH + ETSAK NINI+ A L + IL+ + +
Sbjct: 122 NKCDMTDKRVVSK-ERGEAIAREHGIR-FMETSAKSNINIERAFCELAEAILD----KTS 175
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
G A + ++R + + G N C
Sbjct: 176 GRESAENPERVVIDRRNNDKAPGYNKCC 203
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 19/201 (9%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y + ++++KI++IG+ GK+ ++ R+ FS +ATIGV+F + L DH+T+
Sbjct: 5 YGDYGPRIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTV 64
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD V +W ++L N
Sbjct: 65 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHAD----N 119
Query: 568 PIPCVLLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NKCD + A+ EF + + ETSA + IN++ A T++ I
Sbjct: 120 NIVIMLIGNKCDLGNLRAVPIEDAR--EFAQREGLF-FLETSALEAINVESAFLTVLTDI 176
Query: 627 ---------LENDKVQANGDS 638
+ ND Q NG+S
Sbjct: 177 YRIISKKALIANDD-QGNGNS 196
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 110/184 (59%), Gaps = 3/184 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKT+++ +YV++ FS Y+ATIG DF K + D + ++ LQ+W
Sbjct: 3 RKKVLLKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKEVMIDDDKLVTLQIW 62
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +V+D+T+ +FD + W+++ + + PD P ++
Sbjct: 63 DTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIV 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFS--GWFETSAKDNINIDDAAKTLVQKILENDK 631
L NK D+ + + AK + K + + +FETSAK+ + ++ A + Q L +
Sbjct: 123 LGNKVDRENDRRVSK-AKAHSWCKSKSSAPLQYFETSAKEAVQVEAAFQEAAQLALSQEN 181
Query: 632 VQAN 635
+A+
Sbjct: 182 TEAD 185
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D +FL+KI++IG+ G GK+ +I R+ FS + TIGV+F+ K + + II+ Q+
Sbjct: 8 DVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKIS-DKIIKAQI 66
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A GA IVFD+T+ +F+ + KW ++L + I +
Sbjct: 67 WDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDV----QIVTM 122
Query: 573 LLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
L+ NKCD + I+ + A +F +E++ + + ETSA + N++ A +++ I +
Sbjct: 123 LIGNKCDLADQRNISKDAAS--KFAQEYDMA-YLETSALHSTNVEQAFHQIIKYIYD 176
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 116/206 (56%), Gaps = 10/206 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + + +EH + ETSAK NINI+ A L + IL+ A
Sbjct: 122 NKCDMADKRVVSK-ERGEAIAREHGIR-FMETSAKSNINIERAFCELAEAILDK---TAG 176
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNC 661
+S E V RN+++ ++C
Sbjct: 177 RESAENPERVVVDRRNNEKAPAYKSC 202
>gi|167377314|ref|XP_001734353.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165904184|gb|EDR29502.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 121/211 (57%), Gaps = 18/211 (8%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+++IG+ GK+S++ +++++ F+ Y+ATIG DF K + D E+I LQ+WD AG
Sbjct: 8 LLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESI-ALQVWDTAG 66
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-----IPCV 572
E+F + + +Y+ + F+VFDVT +F ++ WK D L NP P V
Sbjct: 67 HEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDF-----LSGANPTNPTNFPFV 121
Query: 573 LLANKCDQ--PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
++ NK D+ K ++N+ AK E+ + + ++ETSAK +N+++A T+ +K+++
Sbjct: 122 VMGNKVDEDAAKRVVSNDQAK--EWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTM 179
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
K + D+H+ + S++ N+ N C
Sbjct: 180 KKE---DNHSVPISTISIDGNTTTEPNKSCC 207
>gi|3914557|sp|Q40787.1|RAB7_CENCI RecName: Full=Ras-related protein Rab7
gi|1155265|gb|AAA85273.1| possible apospory-associated protein [Cenchrus ciliaris]
Length = 206
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAK+ N++DA +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|115464893|ref|NP_001056046.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [Oryza sativa Japonica Group]
gi|113579597|dbj|BAF17960.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|215767238|dbj|BAG99466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767294|dbj|BAG99522.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632232|gb|EEE64364.1| hypothetical protein OsJ_19205 [Oryza sativa Japonica Group]
Length = 206
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD N+++A +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|348578117|ref|XP_003474830.1| PREDICTED: ras-related protein Rab-7b-like [Cavia porcellus]
Length = 196
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++GELG GKTS++ +YVH+ F Y+ T+G KV+ D +T ++LQ+WD GQE
Sbjct: 10 KLIIVGELGVGKTSLLHQYVHKTFYGEYQTTLGASILSKVIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDVWRGDILAKME----QSYPMVVLGNKID 124
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK-------ILENDKV 632
+ P + +E + S +FE SAK++IN+ A + L ++ ILEN V
Sbjct: 125 LEDRKVP--PEMAQGWCEEKDIS-YFEVSAKNDINVAQAFEVLARQALSRYRGILENHLV 181
>gi|464553|sp|P35281.1|RAB10_RAT RecName: Full=Ras-related protein Rab-10
gi|455344|gb|AAA41991.1| RAB10 [Rattus norvegicus]
Length = 200
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TI +DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHAN----EDVERMLLR 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDHKRVV-PKGKGEQIAREHRIR-FFETSAKANINIEKAFLTLPEDIL 171
>gi|300121531|emb|CBK22050.2| unnamed protein product [Blastocystis hominis]
Length = 298
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 12/170 (7%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK + +G+ G GKTSII R+++ F P Y++TIG+DF K + +++ I R+QLWD AGQ
Sbjct: 69 YKFVFLGDAGTGKTSIITRFIYDSFDPTYQSTIGIDFLSKTILYNNRPI-RMQLWDTAGQ 127
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D++ ++FD V+KW +D+ + + + V++ NK
Sbjct: 128 ERFQSLIPSYIRDSSVAVIVYDISSRSSFDNVMKWVRDVRDQ-----RDEVILVIVGNKT 182
Query: 579 DQPKEGIANNPAKIDEF--IKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
D + I+E + E N + +FE+SAK N NID + +V+K+
Sbjct: 183 DLSD----SRAVTIEEGQKLAEDNNAMFFESSAKCNYNIDTVFRKVVEKL 228
>gi|19923985|ref|NP_612462.1| ras-related protein Rab-3C [Homo sapiens]
gi|388452650|ref|NP_001252924.1| ras-related protein Rab-3C [Macaca mulatta]
gi|297675313|ref|XP_002815628.1| PREDICTED: ras-related protein Rab-3C isoform 2 [Pongo abelii]
gi|332233625|ref|XP_003266004.1| PREDICTED: ras-related protein Rab-3C [Nomascus leucogenys]
gi|332821437|ref|XP_526915.3| PREDICTED: ras-related protein Rab-3C isoform 2 [Pan troglodytes]
gi|402871610|ref|XP_003899749.1| PREDICTED: ras-related protein Rab-3C [Papio anubis]
gi|23396832|sp|Q96E17.1|RAB3C_HUMAN RecName: Full=Ras-related protein Rab-3C
gi|15278255|gb|AAH13033.1| RAB3C, member RAS oncogene family [Homo sapiens]
gi|19067861|gb|AAK08968.1| Rab3c [Homo sapiens]
gi|119575373|gb|EAW54978.1| RAB3C, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|355691328|gb|EHH26513.1| Ras-related protein Rab-3C [Macaca mulatta]
gi|355749935|gb|EHH54273.1| Ras-related protein Rab-3C [Macaca fascicularis]
gi|380809404|gb|AFE76577.1| ras-related protein Rab-3C [Macaca mulatta]
Length = 227
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 16/212 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + E +FETSAKDNIN+ + LV I DK+
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIIC--DKM--- 195
Query: 636 GDSHATSEAVFSLNRNSQETKN----GRNCAC 663
+S T A+ + +N++ + NCAC
Sbjct: 196 SESLETDPAITAAKQNTRLKETPPPPQPNCAC 227
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 9/172 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKTSI+ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKI-KLQIWDT 64
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + W Q++D N + +LL
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIKTWMQNIDEHAN----NDVEKMLLG 120
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD K I+ + HN + ETSAK NINI +A + L I
Sbjct: 121 NKCDVDEKRQISFQQGL--QLANSHNIL-FMETSAKSNINITEAFEALATGI 169
>gi|354475103|ref|XP_003499769.1| PREDICTED: ras-related protein Rab-3D-like [Cricetulus griseus]
gi|344240071|gb|EGV96174.1| Ras-related protein Rab-3D [Cricetulus griseus]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 7/183 (3%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
SP ++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+
Sbjct: 10 SPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHD 68
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I+LQ+WD AGQER+ +T YY+ A+G +++D+ +F AV QD ++
Sbjct: 69 KRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAV----QDWATQIKTYS 124
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ +L+ NKCD E + PA+ + + + +FE SAK+NIN+ + LV
Sbjct: 125 WDNAQVILVGNKCDLEDERLV--PAEDGQRLADDLGFEFFEASAKENINVKQVFERLVDT 182
Query: 626 ILE 628
I E
Sbjct: 183 ICE 185
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF MT YY+ A G IV+DVT +F V +W ++D + + +
Sbjct: 60 QIWDTAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYAS----DNVN 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD K+ + + A +EF K N + ETSAK + N++ A T+ +I
Sbjct: 116 KLLVGNKCDLTSKKQVDRSTA--EEFAKSLNIP-FLETSAKISTNVEQAFMTMAAEI 169
>gi|319401899|ref|NP_001187352.1| ras-related protein Rab-35 [Ictalurus punctatus]
gi|308322789|gb|ADO28532.1| ras-related protein rab-35 [Ictalurus punctatus]
Length = 201
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 10/207 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 114
Query: 571 CVLLANKCDQPKEGIA-NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK D P + N A+ +F ++ + FETSAK+NIN+++ + + +L
Sbjct: 115 RILVGNKNDDPNSKVVETNDAQ--KFAEQMSIR-LFETSAKENINVEEMFNCITELVLWA 171
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETK 656
K V L++NS+ K
Sbjct: 172 KKESVAKQHQLQQNDVIKLSKNSKRKK 198
>gi|397514337|ref|XP_003827446.1| PREDICTED: ras-related protein Rab-3C [Pan paniscus]
Length = 227
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 107/181 (59%), Gaps = 15/181 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVE 115
Query: 571 CVLLANKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
++L NKCD K ++ + ID IK + ETSAK +IN+++A TL + I
Sbjct: 116 RMILGNKCDMNEKRQVSKEKGEKLAIDYGIK------FLETSAKSSINVEEAFFTLARDI 169
Query: 627 L 627
+
Sbjct: 170 M 170
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 110/179 (61%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ +S Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F++V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFNSVKMWLQEIDRYAT----SSVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D + K + + AK EF + +N + ETSA D+ N+++A T+ ++I E
Sbjct: 116 KLLVGNKSDLKDKRIVEYDVAK--EFAETNNMP-FLETSALDSTNVEEAFLTMAKQIKE 171
>gi|345793828|ref|XP_851045.2| PREDICTED: ras-related protein Rab-3C [Canis lupus familiaris]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|407411083|gb|EKF33291.1| hypothetical protein MOQ_002844 [Trypanosoma cruzi marinkellei]
Length = 207
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ +++K ++IG+ G GK+ ++ ++ + F P + TIGV+F +V++ + + +LQ+W
Sbjct: 3 QHHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNV-KLQIW 61
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQE F ++TR YY+ A GA +V+DVTR TF + W +D A I +L
Sbjct: 62 DTAGQESFRSITRSYYRGACGALLVYDVTRRETFTHLQTWLEDAKANAN----TAIVIML 117
Query: 574 LANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+ NKCD + K ++ + F +++N + ETSAK N+DDA I EN
Sbjct: 118 IGNKCDLEAKRQVSREEG--ESFARKNNLV-FMETSAKTAQNVDDAFMKTAMMIYEN 171
>gi|395818775|ref|XP_003782792.1| PREDICTED: ras-related protein Rab-3C [Otolemur garnettii]
Length = 227
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|326925412|ref|XP_003208909.1| PREDICTED: ras-related protein Rab-3B-like [Meleagris gallopavo]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 18/213 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITSEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E I P + + + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDMEDERIV--PLEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESIE 192
Query: 636 GD-SHATSEAVFSLNRNSQETKN----GRNCAC 663
D S TS RN + T + +NC+C
Sbjct: 193 SDPSRGTS------GRNVRLTDHPPPSQQNCSC 219
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M D+ +FL+K+++IG+ G GKT+I+ R+ F+ ++TIGV+FA + ++ D++ II+
Sbjct: 1 MSDEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNK-IIKA 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T YY+ AVGA +++DVT ++ + +W Q+L D N I
Sbjct: 60 QIWDTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDH---ADSN-IV 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NKCD + + AK +F ++ + ETSA D ++ A + ++ +I
Sbjct: 116 LMLVGNKCDLKHLRAVPTEEAK--QFASQNKLL-FIETSALDGTDVALAFRNILTEIYH- 171
Query: 630 DKVQANGDSHATSE 643
+V A + HA E
Sbjct: 172 -RVSAAENVHANLE 184
>gi|410922738|ref|XP_003974839.1| PREDICTED: ras-related protein Rab-3C-like [Takifugu rubripes]
Length = 219
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 7/189 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKLLIIGNSSVGKTSFLFRYADDAFTSAFVSTVGIDFKVKTV-YKNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F AV QD ++ + VL
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEESFGAV----QDWSTQIKTYSWDNAQVVLAG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + + + + E +FETSAKDNIN+ + LV I + +
Sbjct: 134 NKCDMDEERVVSVDSG--RLLAEQLGFEFFETSAKDNINVKQTFERLVDLICDKMSESLD 191
Query: 636 GDSHATSEA 644
GD T+ A
Sbjct: 192 GDPAVTTGA 200
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +FD + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFP 119
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V++ NK D + K I++ A F + +FETSAK+ IN++DA + + ++ L
Sbjct: 120 FVVIGNKIDVEESKRMISSKRAM--TFCQSKGGIPYFETSAKEAINVEDAFEVIARQALA 177
Query: 629 NDKVQANGDSH 639
+ V G+
Sbjct: 178 QEDVGDFGNDF 188
>gi|350594330|ref|XP_003483878.1| PREDICTED: ras-related protein Rab-3C-like isoform 2 [Sus scrofa]
Length = 227
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ L K++++G+ G GKTS++ +YV + FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MASHKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV+ ++F ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + I A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLESKVIHGKKAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|297809149|ref|XP_002872458.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
gi|297318295|gb|EFH48717.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 18/192 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L E ++ L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQ-IGEKLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + + D P
Sbjct: 60 QIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
++L NK D + +++ + E + W FETSAK++ N+D+A T
Sbjct: 120 FIVLGNKVD-----VDGGSSRV---VSEKKAADWCASNGNIPYFETSAKEDFNVDEAFLT 171
Query: 622 LVQKILENDKVQ 633
+ + L N+ Q
Sbjct: 172 IAKTALANEHEQ 183
>gi|158287951|ref|XP_309827.4| AGAP010875-PA [Anopheles gambiae str. PEST]
gi|157019435|gb|EAA05523.4| AGAP010875-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
PD+ +KIL+IGE G GK+S++ R+ F TIGVDF K+L D ++L
Sbjct: 3 PDRILATFKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDG-VKVKLA 61
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY++A GA +V+DVT+ TF + W +L+ T N +
Sbjct: 62 IWDTAGQERFRTLTPSYYRDAQGAILVYDVTKPDTFQKLESWLNELEIYGTR---NNMAK 118
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
+++ NK D P I F K+H + ETSAK + + DA + +V+KI+E D
Sbjct: 119 MVVGNKIDHPNRAIGREEGF--RFAKKHRMM-FIETSAKTSEGVKDAFEEVVRKIMETDG 175
Query: 632 VQANGD 637
+ D
Sbjct: 176 LWERND 181
>gi|417396991|gb|JAA45529.1| Putative gtp-binding protein [Desmodus rotundus]
Length = 201
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ K+ E + F+G FETSAK+N+N+++ + +
Sbjct: 115 RILVGNKNDDPER-------KVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITEL 167
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETK 656
+L K V L RNS+ K
Sbjct: 168 VLRAKKDNLAKQQQQQQNDVVKLTRNSKRKK 198
>gi|390459930|ref|XP_002806670.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-3C-like
[Callithrix jacchus]
Length = 225
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 141 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTXERLVDIICD 191
>gi|256084393|ref|XP_002578414.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
Length = 355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 105/175 (60%), Gaps = 9/175 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K+L+IG+ G GK+ ++ R+ + F+ Y +TIGVDF ++ + + + +++LQ+WD
Sbjct: 162 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGK-VVKLQIWDT 220
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A G IV+D+T +TF V W ++ + + +L+
Sbjct: 221 AGQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYA----NSTVSRLLVG 276
Query: 576 NKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
NKCD + + + AK EF ++ S + ETSAKD N+++A + +KI EN
Sbjct: 277 NKCDLANRRAVETSVAK--EFADKNQMS-FIETSAKDATNVENAFLKMAEKIQEN 328
>gi|440790656|gb|ELR11936.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 228
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 114/208 (54%), Gaps = 22/208 (10%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW------ 502
S D ++L KI+++G+ G GK++I+ R+ + F + TIGV FA K ++
Sbjct: 3 SDASDTPDYLLKIVIVGDSGVGKSNIMSRFTNDTFEESSKTTIGVAFATKNMAVETSNDS 62
Query: 503 --DHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAK 560
D + ++LQ+WD AGQER+ ++ YY+ A GA +V+D+T + D++ KW +++D
Sbjct: 63 TKDCKKQVKLQVWDTAGQERYRALSSAYYRGAQGALVVYDITSRESLDSIPKWLEEIDKY 122
Query: 561 VTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDE----FIKEHNFSGWFETSAKDNINID 616
T + L+ NK D + N ++E +E+ F + ETSAKD NI+
Sbjct: 123 CT----QDVVVTLVGNKLDLSE----NRCVSVEEGKKVAARENMF--FIETSAKDATNIE 172
Query: 617 DAAKTLVQKILENDKVQANGDSHATSEA 644
A L+++I++++ QAN D +A
Sbjct: 173 KAFTHLIKEIIQSNLSQANNDGKIAGKA 200
>gi|410948619|ref|XP_003981028.1| PREDICTED: ras-related protein Rab-3C [Felis catus]
Length = 227
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 9/168 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K +FL+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF +K + D + + +L
Sbjct: 1 MAKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVS 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDD 617
+LL NKCD + K ++ ++ K+H +FETSAK +IN+++
Sbjct: 116 RMLLGNKCDIEAKRKVSRETG--EKLAKDHGIK-FFETSAKSSINVEE 160
>gi|29336944|sp|Q9GP33.1|RAB4A_ECHMU RecName: Full=Probable Ras-related protein Rab-4A
gi|11602725|emb|CAC18549.1| putative ras-related protein RAB4A [Echinococcus multilocularis]
Length = 223
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K L+IG G GKT I++RY + F P+ + TIG +F +V+S D T +++Q+
Sbjct: 4 DRFDYLFKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVD-GTHVKIQI 62
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +M R YY +AVG +V+D+T +F AV +W D T P + +
Sbjct: 63 WDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLAT-P---GVVVI 118
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D + + F +E+ + ETSA NIDDA + V+ +L
Sbjct: 119 LVGNKKDLRDTDGQVTHWEANTFAQENGLQ-FIETSALTGENIDDAFTSCVRVLL 172
>gi|350594328|ref|XP_003359827.2| PREDICTED: ras-related protein Rab-3C-like isoform 1 [Sus scrofa]
Length = 225
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 141 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 191
>gi|301095181|ref|XP_002896692.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108831|gb|EEY66883.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 365
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 14/206 (6%)
Query: 422 TAASPNTSVVAGKTSITNGS-SKEVSP-YSKMPDKREFLYKILVIGELGAGKTSIIKRYV 479
TAA +TS + S+T S S SP +S +P E + K+++IG+ G GK++++ R+
Sbjct: 62 TAAKNSTS----QASVTGSSLSASNSPRFSALPPITESILKVVLIGDSGVGKSNLVMRFT 117
Query: 480 HQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVF 539
+ PH T+G +FA K + + +R Q+WD AGQERF ++T YY+ AVGA IV+
Sbjct: 118 KNKYMPHSVQTVGFEFATKTIRVG-DRRLRAQIWDTAGQERFQSLTAAYYRNAVGAMIVY 176
Query: 540 DVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPK--EGIANNPAKIDEFIK 597
D+T ++F+ V W A+V + +L+ NKCD E + + F
Sbjct: 177 DITNRSSFEHVTGWL----AQVHEHSHESLVLILVGNKCDLAHLPESRQVSTLEAARFAA 232
Query: 598 EHNFSGWFETSAKDNINIDDAAKTLV 623
+H+ + ETSA D N+ DA K L+
Sbjct: 233 KHSME-FLETSALDATNVVDAFKKLI 257
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 7/183 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + + +EH+ + ETSAK NINI+ A + L + IL+ +
Sbjct: 122 NKCDMTDKRVV-SIERGESIAREHDIR-FMETSAKANINIERAFRELAEAILDKTSGKET 179
Query: 636 GDS 638
D+
Sbjct: 180 TDN 182
>gi|328785884|ref|XP_392879.2| PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC409364
isoform 1 [Apis mellifera]
Length = 760
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 7/164 (4%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YK+LV+G+ GKT I+ RY + + Y +TIG+DF K+++ D T I+LQ+WD AGQ
Sbjct: 9 YKVLVLGDSNVGKTCIVHRYCDERYYDTYISTIGIDFKQKIINLDG-TPIKLQIWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF +T YY+ A+G +++DVT +F+ + W +++ + PD + V+ ANKC
Sbjct: 68 ERFRALTTAYYRGAMGILLMYDVTSLESFNHLSYWLRNIQENAS-PD---VVKVVAANKC 123
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTL 622
D + A+ + I E +FE S K+NINI++A TL
Sbjct: 124 DVTTNRAVD--AERGQKIAESFDMPFFEVSCKENINIEEAFLTL 165
>gi|313242103|emb|CBY34279.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 105/176 (59%), Gaps = 9/176 (5%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD A
Sbjct: 15 LLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDTA 73
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQERF +T YY+ A G +V+D+T+ TFD + KW ++++ + + +L+ N
Sbjct: 74 GQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHAS----EDVERMLIGN 129
Query: 577 KCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
KCD + K I+ + + E N +FETSAK+NINI+ A +L + IL +
Sbjct: 130 KCDMEDKRLISEERGRK---VAEENGIKFFETSAKENINIEIAFNSLAEDILNKQR 182
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 10/207 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 114
Query: 571 CVLLANKCDQPKEGIA-NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+L+ NK D P + N A+ +F ++ S FETSAK+N+N+++ + + +L
Sbjct: 115 RILVGNKNDDPNSKVVETNDAQ--KFAEQMGIS-LFETSAKENVNVEEMFNCITELVLRA 171
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETK 656
K V L +NS+ K
Sbjct: 172 KKESVAKQQQQQQNDVIKLKQNSKRKK 198
>gi|410986345|ref|XP_003999471.1| PREDICTED: ras-related protein Rab-7b-like isoform 1 [Felis catus]
gi|410986347|ref|XP_003999472.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Felis catus]
Length = 200
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 12/177 (6%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAK-TIPMEPSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK-------ILEN 629
+ A+ + KE + +FE SAK++IN+ A + L + ILEN
Sbjct: 128 LADRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRALSRYRSILEN 181
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 134/254 (52%), Gaps = 13/254 (5%)
Query: 379 SPSDLKKEILSITTPI-VTEAGRKKHNEPKPFTSPNSSSNGEKETAASPNTSVVAGKTSI 437
S DLK ++ I + +T R + P + P+SS N +K T T G S+
Sbjct: 235 SIHDLKVKLKEICLNLKLTTTARNTAMKGDP-SCPSSSKNEKKSTKHRRKTRFFIGGCSL 293
Query: 438 TNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFAL 497
+ + K M +++ L K+ ++G+ G GKTS++ +YV+Q FS Y+ATIG DF
Sbjct: 294 SEPTLK------IMAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLT 347
Query: 498 KVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL 557
K + ++ + ++ LQ+WD AGQERF ++ +Y+ A +V+D+T TF + W+ +
Sbjct: 348 KEIVFE-DKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEF 406
Query: 558 DAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFS---GWFETSAKDNIN 614
+ D + P ++L NK D+ E + + E+ + + FETSAK++ +
Sbjct: 407 LVQAAPRDPDAFPFLVLGNKVDRDSERKV-SLERAQEWCESKSLGQTLHHFETSAKESTS 465
Query: 615 IDDAAKTLVQKILE 628
+++A +T+ L+
Sbjct: 466 VEEAFRTIASIALQ 479
>gi|224058186|ref|XP_002197150.1| PREDICTED: ras-related protein Rab-3B [Taeniopygia guttata]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 120/213 (56%), Gaps = 18/213 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRNDKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFVLMYDITSEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--NDKVQ 633
NKCD + I P + + + + +FE SAK+NIN+ + LV I E ++ ++
Sbjct: 135 NKCDMEDDRIV--PMEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESIE 192
Query: 634 ANGDSHATSEAVFSLNRN---SQETKNGRNCAC 663
++ +S TS L N SQ+ NC+C
Sbjct: 193 SD-NSRGTSGRSMRLTDNPPPSQQ-----NCSC 219
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 108/175 (61%), Gaps = 9/175 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +LQ+WD
Sbjct: 19 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + + +L+
Sbjct: 78 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVLKLLVG 133
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E+
Sbjct: 134 NKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKES 185
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 62/180 (34%), Positives = 106/180 (58%), Gaps = 14/180 (7%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHAS----SDVE 115
Query: 571 CVLLANKCDQPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD K +A + ID IK + ETSAK +N+++A TL + I+
Sbjct: 116 RMLLGNKCDMDKRQVAKERGEKLAIDYSIK------FLETSAKAGLNVEEAFLTLARDIM 169
>gi|307777766|dbj|BAJ21279.1| Rab-family small GTPase Rab2C [Tetrahymena thermophila]
Length = 223
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 109/180 (60%), Gaps = 27/180 (15%)
Query: 457 FLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
+L+K +VIG+ G GK+ ++ ++ + ++ TIGV+F +K++ D + I +LQ+WD A
Sbjct: 6 YLFKFIVIGDSGVGKSCLVLQFTENYIRKNHDVTIGVEFGVKIVQIDGKNI-KLQIWDTA 64
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLLA 575
GQE F ++TR YY+ A+GA +V+D++R +F + W +++ + +GN + +L+
Sbjct: 65 GQENFRSLTRAYYRTAIGAIVVYDISRRDSFLHINDWIKEMKS-----NGNQNMVVLLIG 119
Query: 576 NKCD-------QPKEG--IANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NK D Q +EG +AN E+ F +FETSA+D+IN+D+A L ++I
Sbjct: 120 NKKDKESQRQVQTEEGQAVAN----------ENGFL-FFETSARDSINVDEAFTKLAEQI 168
>gi|209879788|ref|XP_002141334.1| Rab7 GTPase protein [Cryptosporidium muris RN66]
gi|209556940|gb|EEA06985.1| Rab7 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 213
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D++ ++ LQ+
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNKKFSMQYKATIGADFLTKDIVIDNK-LVTLQI 67
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++ +Y+ A +V+D+T +FD + W+++ + D N P V
Sbjct: 68 WDTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFDGLEAWREEFLIQAAPKDPNCFPFV 127
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
++ NK D ++ + + + K + +FETSAK+ N+D+A + + ++ L +
Sbjct: 128 VIGNKLDLDQKSRKVSSQRALAWCKGKHIQ-YFETSAKNATNVDEAFEEIGRRALSRETT 186
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D A +LN +Q+ C+C
Sbjct: 187 ----DEQAYFPEPLTLNNQNQQEFGLSGCSC 213
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT+ TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D ++ A+ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRAVSAKRAQ--AWCHSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|403221236|dbj|BAM39369.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 107/177 (60%), Gaps = 10/177 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ R+ + F P + TIGV+F + ++ E I +LQ+WD
Sbjct: 5 KYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +VFD++R +TFD + KW +++ G+P + +L+
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFDHLTKWLEEVRDH-----GSPTMTIILI 118
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NK D + + K +F ++++ + ETSAK + N++ A T + I EN K
Sbjct: 119 GNKTDVATREVEYHEGK--QFAEQNDLI-YMETSAKGDYNVEAAFLTTAEMIYENVK 172
>gi|126306739|ref|XP_001365780.1| PREDICTED: ras-related protein Rab-7b-like [Monodelphis domestica]
Length = 200
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D+ T+ +LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLNQYVHKTFYEDYQTTLGASILSKIIMVDNTTL-KLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F A+ W+QD+ K TL P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDRDSFHALDTWRQDILQK-TLQTEQVFPIVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++ A ++ KE + +FE SAK++IN++ A + L ++ L
Sbjct: 128 LDAREVSQKKAL--DWCKEKDIP-YFEVSAKNDINVEQAFELLARQAL 172
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 110/176 (62%), Gaps = 9/176 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L DH+++ + Q+
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSV-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+T+ +FD + +W ++L D N I +
Sbjct: 65 WDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGH---ADKN-IVIM 120
Query: 573 LLANKCDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D +E +++ AK EF ++ N + ETSA N+++A +T++ +I
Sbjct: 121 LVGNKSDLEEERAVSSEDAK--EFAEKENLF-FLETSALQATNVENAFQTVLTEIF 173
>gi|291225416|ref|XP_002732696.1| PREDICTED: RAS-associated protein RAB13-like [Saccoglossus
kowalevskii]
Length = 719
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P E ++K++ +G+ G GK+S I R+ + F ++ ATIGVDF +K + DH+ +I L
Sbjct: 523 LPKNPERVFKVVFVGDSGVGKSSFIYRFCNDSFKSNFSATIGVDFQVKNVIVDHK-MIAL 581
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++T+ Y+++A G +V+DVT ++F +V W + V +G I
Sbjct: 582 QLWDTAGQERFRSITKQYFRKADGVIVVYDVTSESSFTSVRNWMSSVQDGV--EEGTVI- 638
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+++ NK D E K + E + ++E SAK + N+D++ + L +K+ E
Sbjct: 639 -MIIGNKTDMEDE--RQVKQKDGHRLSEEYETLFYEASAKSSYNVDESIQALSRKLQE 693
>gi|351710944|gb|EHB13863.1| Ras-related protein Rab-7b, partial [Heterocephalus glaber]
Length = 174
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G KV+ D +T ++LQ+WD GQE
Sbjct: 10 KLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKVIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFKALDVWRDDVLAKI-IPVEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ P ++ + E +FE SAK++IN+ A +TL ++ L
Sbjct: 128 LEDRKV---PPEMAQGWCEEKEMPYFEVSAKNDINVGQAFETLARRAL 172
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 122/211 (57%), Gaps = 15/211 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ R+ F + +ATIGV+F +++ D + I + Q+WD
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEI-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R TFD++ +W Q+L T + + + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQEL----TTQNDSTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D N+ A + ++++I N +
Sbjct: 125 NKCDL--ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVL 182
Query: 635 NGDSHATSEAVFSLNR----NSQETKNGRNC 661
N DS+ +A S+NR N +K G +C
Sbjct: 183 NSDSY---KAELSVNRVSLVNGAGSKQGPSC 210
>gi|340382696|ref|XP_003389854.1| PREDICTED: ras-related protein Rab-3-like [Amphimedon
queenslandica]
Length = 218
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 102/178 (57%), Gaps = 7/178 (3%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M +++YKIL++G G GKT+ + RY F+P + +T+G+DF +K L + + I
Sbjct: 11 SVMDVNFDYMYKILMVGNSGVGKTAYVSRYCDDHFNPAFISTVGIDFRVKNLIRNQKRI- 69
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQER+ +T YY A+G ++FD+T TF A W Q + + N
Sbjct: 70 KLQIWDTAGQERYQAITTAYYHGAMGFIVMFDLTSEDTFSACRMWIQQIKE---MALENA 126
Query: 569 IPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NK D + + + I+EF +FETSAK+N NI ++A+ LV I
Sbjct: 127 II-LLIGNKVDLTAQRQVSTES-IEEFTDSLGIH-FFETSAKENTNIKESAEYLVDAI 181
>gi|76779772|gb|AAI06309.1| Rab3d protein [Xenopus laevis]
Length = 217
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 116/217 (53%), Gaps = 28/217 (12%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-YRNEKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D++ +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDISNLESFNAV----QDWATQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGI--ANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI------- 626
NKCD + + A + K+ E E F +FE SAKDNIN+ + LV I
Sbjct: 135 NKCDLEDDRVIAAEDGRKLAE---ELGFE-FFEASAKDNINVKQVFERLVDIICEKMNES 190
Query: 627 LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
LEN V +G + T A K+ NC+C
Sbjct: 191 LENGPVPGSGTAQLTESA----------PKDNSNCSC 217
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ L K++++G+ G GKTS++ +YV + FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV+ ++F ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + I A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLETKVIHGKKAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L DH ++ + Q+
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSV-KAQI 64
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+TR +FD + +W +L A D N I +
Sbjct: 65 WDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAH---ADKN-IVIM 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D + + ++ AK EF ++ N + ETSA N++ + +T++ +I
Sbjct: 121 LVGNKSDLEEQRAVSTEDAK--EFAEKENLF-FLETSALQATNVESSFQTVLTEIF 173
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 100/174 (57%), Gaps = 8/174 (4%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
++KI++IGE G GKTS+I RYV F P Y++TIG DF K + ++ + LQ+WD AG
Sbjct: 6 MFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEGVEYV-LQIWDTAG 64
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
E+F +M +Y+ + GAF+VFDVT A+F + W + + N +P ++ NK
Sbjct: 65 HEKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINEFSGSIN----NDVPIIVCGNK 120
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
D + A+ ++ N++ + E+SAK + + D T+V+ I++N K
Sbjct: 121 TDLENRCVPTASAQ--QWCDLRNYT-YVESSAKSSAGVTDMFATIVKLIVDNKK 171
>gi|389582872|dbj|GAB65608.1| small GTPase Rab7 [Plasmodium cynomolgi strain B]
Length = 184
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 2/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +K+ + K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K D+E + +
Sbjct: 1 MSNKKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHL-TM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFD+T T++++ WK + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V++ NK D+ + K+ ++ K +N +FETSAK+ IN+D A + +K +
Sbjct: 120 FVIIGNKVDETNKRKV-QSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAM 175
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+KIL+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T+ +F+ + KW +++D + + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINKWIRNIDEHAS----KDVEKIILG 121
Query: 576 NKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D+ K + + A +E + H+ + ETSAK NINID A L IL
Sbjct: 122 NKVDEADKREVLKSEA--EELARIHSIR-FMETSAKTNINIDAAFLGLANDIL 171
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ L
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVD-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D T TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V++ NK D E A P + + N FE SAK+ +D+A T+ + L+
Sbjct: 120 FVVIGNKIDL--ENRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQ- 176
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+A+ + + L RN N +CAC
Sbjct: 177 --EADTELYKEVPERVDLRRNDAARSNSSDCAC 207
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 104/174 (59%), Gaps = 3/174 (1%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +Q+W
Sbjct: 5 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIW 63
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF ++ +Y+ A +VFDVT +F + W+ + + + D P V+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQASPRDPENFPFVV 123
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L NK D ++ A+ ++ N +FETSAK+ IN++ A +T+ +K L
Sbjct: 124 LGNKVDLENRAVSAKRAQ--QWCHSKNEIPYFETSAKEGINVEHAFQTIAKKAL 175
>gi|114052949|ref|NP_001040071.1| ras-related protein Rab-3C [Bos taurus]
gi|149732720|ref|XP_001495120.1| PREDICTED: ras-related protein Rab-3C-like [Equus caballus]
gi|426246459|ref|XP_004017011.1| PREDICTED: ras-related protein Rab-3C [Ovis aries]
gi|108935883|sp|P10949.3|RAB3C_BOVIN RecName: Full=Ras-related protein Rab-3C; AltName: Full=SMG P25C
gi|86438380|gb|AAI12796.1| RAB3C, member RAS oncogene family [Bos taurus]
gi|296475826|tpg|DAA17941.1| TPA: RAB3C, member RAS oncogene family [Bos taurus]
Length = 227
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 134/254 (52%), Gaps = 13/254 (5%)
Query: 379 SPSDLKKEILSITTPI-VTEAGRKKHNEPKPFTSPNSSSNGEKETAASPNTSVVAGKTSI 437
S DLK ++ I + +T R + P + P+SS N +K T T G S+
Sbjct: 216 SIHDLKVKLKEICLNLKLTTTARNTAMKGDP-SCPSSSKNEKKSTKHRRKTRFFIGGCSL 274
Query: 438 TNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFAL 497
+ + K M +++ L K+ ++G+ G GKTS++ +YV+Q FS Y+ATIG DF
Sbjct: 275 SEPTLK------IMAHRKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLT 328
Query: 498 KVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL 557
K + ++ + ++ LQ+WD AGQERF ++ +Y+ A +V+D+T TF + W+ +
Sbjct: 329 KEIVFE-DKLVTLQIWDTAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEF 387
Query: 558 DAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFS---GWFETSAKDNIN 614
+ D + P ++L NK D+ E + + E+ + + FETSAK++ +
Sbjct: 388 LVQAAPRDPDAFPFLVLGNKVDRDSERKV-SLERAQEWCESKSLGQTLHHFETSAKESTS 446
Query: 615 IDDAAKTLVQKILE 628
+++A +T+ L+
Sbjct: 447 VEEAFRTIASIALQ 460
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 108/181 (59%), Gaps = 7/181 (3%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
+P S ++L K+L+IG+ G GK+ ++ R+ F+P + TIG+DF ++ + + +
Sbjct: 6 APASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGK 65
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I +LQ+WD AGQERF +T YY+ A+G +V+DVT +F + W ++++ T
Sbjct: 66 RI-KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHAT--- 121
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + +L+ NKCD ++ + ++ A+ E+ + ETSAK++IN+++A +L +
Sbjct: 122 -DSVNKMLIGNKCDMAEKKVVDS-ARGKSLADEYGIK-FLETSAKNSINVEEAFISLAKD 178
Query: 626 I 626
I
Sbjct: 179 I 179
>gi|296475820|tpg|DAA17935.1| TPA: ras-related protein Rab-3C [Bos taurus]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|426384624|ref|XP_004058859.1| PREDICTED: ras-related protein Rab-3C [Gorilla gorilla gorilla]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 10/194 (5%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ D ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + L D + +I+
Sbjct: 9 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGK-VIK 67
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVTR ATFD V +W ++L T P I
Sbjct: 68 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDH-TDPS---I 123
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA-AKTLVQ--KI 626
C+L+ NK D + +A + EF + + + ETSA D N+D+A A+ L Q +I
Sbjct: 124 VCMLIGNKSDL-RHLVAVSTEDGKEFAEAESMY-FMETSALDATNVDNAFAEVLTQIYQI 181
Query: 627 LENDKVQANGDSHA 640
+ V+A D A
Sbjct: 182 VNKKPVEAPEDGSA 195
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+++IG+ GK++++ RY F + +ATIGV+F + + +D + I + Q+WD
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEI-KAQIWDT 66
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R TF++V +W +L D N I +L+
Sbjct: 67 AGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMH---SDMN-IVTMLVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA- 634
NKCD E + P + + + E + ETSA + N++DA + +++++ N +A
Sbjct: 123 NKCDL--ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKAL 180
Query: 635 NGDSH 639
N DS+
Sbjct: 181 NSDSY 185
>gi|359495179|ref|XP_003634933.1| PREDICTED: ras-related protein Rab7 isoform 2 [Vitis vinifera]
Length = 216
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVT----LP-- 564
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ +V +P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQVHDAFFIPLF 119
Query: 565 -----DGNPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA 618
D P +LL NK D + K +++ +FETSAK++ N+D A
Sbjct: 120 LANPSDPKTFPFILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAA 179
Query: 619 AKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + L N+ Q + EAV ET+ G CAC
Sbjct: 180 FLCIAKTALANEHEQ-DIYFQGIPEAV-------SETEQGGGCAC 216
>gi|407041210|gb|EKE40595.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 203
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 15/178 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KIL++G+ G GKT+I++RY + F Y +TIGVDF +L+ TI +LQ+WD
Sbjct: 7 DFLFKILIVGDSGVGKTAILQRYCNNTFDERYISTIGVDFKPMILNVGERTI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF N+T Y++ IV+DV + + V W +++ K T P NP+ L+
Sbjct: 66 AGQERFMNITAAYFRNTTAVIIVYDVNNRDSLNKVYSWYGEVNEKTTQP--NPVI-FLVG 122
Query: 576 NKCDQPKEGI-----ANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D+ + A N A IK E SAKDNI I + +LV ILE
Sbjct: 123 NKKDENSNSLIDIEEAKNIASKLGNIKV------MECSAKDNIGIKELFGSLVDIILE 174
>gi|126631404|gb|AAI33763.1| RAB35 protein [Xenopus laevis]
Length = 248
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 48 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 106
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 107 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 161
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ + D F F+G FETSAK+N+N+++ + +
Sbjct: 162 RILVGNKNDDPERKVVETE---DAF----KFAGQMDIQLFETSAKENLNVEEMFNCITEL 214
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+L K V L++NS+ K R C
Sbjct: 215 VLRAKKDNLAKQQQQQQNDVVKLSKNSKRKK--RCC 248
>gi|432942757|ref|XP_004083059.1| PREDICTED: ras-related protein Rab-19-like isoform 1 [Oryzias
latipes]
Length = 222
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D +FL+KI++IG+ GKT +++ + FS + TIGVDF ++ L + + + ++Q+
Sbjct: 10 DSFDFLFKIILIGDTNVGKTCVVQNFKSGVFSEKQQNTIGVDFTVRTLDIEGKKV-KMQV 68
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF +T+ YY+ A GA I +D+TR ATFD+V W ++ V L + V
Sbjct: 69 WDTAGQERFRTITQSYYRSAHGAMIAYDITRRATFDSVSHWIRE----VELYGAANVVLV 124
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NKCD +E + KE ETSAK + N+++A + ++++
Sbjct: 125 LIGNKCDLEEERQVRFQDACN-LAKEIGILAALETSAKASQNVEEAFVMMARELM 178
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|348568990|ref|XP_003470281.1| PREDICTED: ras-related protein Rab-3C-like [Cavia porcellus]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--QRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 122/199 (61%), Gaps = 13/199 (6%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
+ D+ ++L+K+++IG+ G GK++++ R+ F+ ++TIGV+FA K L+ D++ +I+
Sbjct: 5 RADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK-VIK 63
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+DVTR T++ V +W ++L T P+ I
Sbjct: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDH-TDPN---I 119
Query: 570 PCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA---AKTLVQK 625
+L+ NK D + ++ + AK + E + ETSA + N+++A A T + +
Sbjct: 120 VVMLIGNKSDLRHLVAVSTDEAK---GLAEREGLYFMETSALEATNVENAFTEALTQIYR 176
Query: 626 ILENDKVQANGDSHATSEA 644
I+ V+A GD ATS A
Sbjct: 177 IVSKKAVEA-GDEGATSSA 194
>gi|327262966|ref|XP_003216293.1| PREDICTED: ras-related protein Rab-3C-like [Anolis carolinensis]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD +E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEEERVISTDRG--KHLAEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|68534613|gb|AAH99268.1| RAB35 protein, partial [Xenopus laevis]
Length = 233
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 33 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 91
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 92 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 146
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ + D F F+G FETSAK+N+N+++ + +
Sbjct: 147 RILVGNKNDDPERKVVETE---DAF----KFAGQMDIQLFETSAKENLNVEEMFNCITEL 199
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+L K V L++NS+ K R C
Sbjct: 200 VLRAKKDNLAKQQQQQQNDVVKLSKNSKRKK--RCC 233
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 9/215 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ + K++++G+ G GKTS++ RYV+ +S Y+ATIG DF K + D + ++ +
Sbjct: 1 MIARKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVVTM 60
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT A +F+ + WK + + P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWKDEFLVHANISSPESFP 120
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
V+L NK D K+ ++ + E K F TSAK IN+D A + + + L+
Sbjct: 121 FVILGNKVDIEDSKKVVSEKAGQ--ELAKSLGDVPLFLTSAKSAINVDTAFEEIAKSALQ 178
Query: 629 NDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
Q D+HA E F+ N Q +C+C
Sbjct: 179 ----QNQNDAHAF-EDDFNDAINIQLEGESNSCSC 208
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 126/219 (57%), Gaps = 13/219 (5%)
Query: 437 ITNGSSKEVSPYSKMPDKR--EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVD 494
+ N K+V+ +S M D+ E+L+K+++IG+ GK++++ RY F+ + +ATIGV+
Sbjct: 74 LINREKKKVTEFSIMEDEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVE 133
Query: 495 FALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWK 554
F + + D + + + Q+WD AGQERF +T YY+ AVGA +V+D++R +TFD+V +W
Sbjct: 134 FQTQSMEIDGKEV-KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWL 192
Query: 555 QDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNIN 614
+L + +L+ NK D E I + + + + E + ETSA D+ N
Sbjct: 193 DELKTH----SETTVARMLVGNKSDL--ENIRDVSVEEGKSLAEAEGLFFIETSALDSTN 246
Query: 615 IDDAAKTLVQKILEN-DKVQANGDSHATSEAVFSLNRNS 652
+ A + ++++I N + N DS+ +A S+NR S
Sbjct: 247 VKKAFEIVIREIYNNISRKVLNSDSY---KAELSVNRVS 282
>gi|46249671|gb|AAH68969.1| RAB35 protein, partial [Xenopus laevis]
Length = 231
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 31 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 89
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 90 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 144
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ + D F F+G FETSAK+N+N+++ + +
Sbjct: 145 RILVGNKNDDPERKVVETE---DAF----KFAGQMDIQLFETSAKENLNVEEMFNCITEL 197
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+L K V L++NS+ K R C
Sbjct: 198 VLRAKKDNLAKQQQQQQNDVVKLSKNSKRKK--RCC 231
>gi|7689363|gb|AAF67748.1| GTP-binding protein RAB3A [Homo sapiens]
Length = 220
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKKIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + L I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLEDVICE 185
>gi|19424194|ref|NP_598220.1| ras-related protein Rab-3C [Rattus norvegicus]
gi|1373214|gb|AAC52879.1| GTP-binding protein [Rattus norvegicus]
Length = 227
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVVSTERG--RHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|367002862|ref|XP_003686165.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
gi|357524465|emb|CCE63731.1| hypothetical protein TPHA_0F02500 [Tetrapisispora phaffii CBS 4417]
Length = 215
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 115/213 (53%), Gaps = 16/213 (7%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +T IRLQLWD AGQ
Sbjct: 11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT-IRLQLWDTAGQ 69
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A +V+D+T+ +F+ + KW +D+ K N I C+ + NK
Sbjct: 70 ERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIEDV--KTERGSENVILCI-VGNKS 126
Query: 579 DQPKE---GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI--LENDK-- 631
D E AK KE + + ETS K N+ + K + + + +N
Sbjct: 127 DLSDERQVTTEEGEAK----AKELGATIFMETSTKAGHNVKNLFKKIAKSLPEFQNSDST 182
Query: 632 -VQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ N +S+ + ++ +S E +N NC C
Sbjct: 183 PLDDNNESNTANNKAQVIDISSTENENQGNCQC 215
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI+++G+ G GKT I RY F+P ++TIGV+FA K ++ + I + Q+WD
Sbjct: 4 DYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDI-KGQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
+G+ER+ +T YY+ +VGA +VFDVT+ +F+++ W L D N + CV +
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQ---YADENIVVCV-VG 118
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D P ++ A + F + + F + ETSA D +++A + + +KI E
Sbjct: 119 NKIDLPTREVSTVEA--ERFARGNGFF-YMETSALDGTGVENAFRQVTKKIFE 168
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 121/219 (55%), Gaps = 22/219 (10%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MPD ++L+K+L+IG+ G GK+ ++ R+ F+ Y +TIGVDF ++ + + +T ++L
Sbjct: 1 MPDGYDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKT-VKL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF + YY+ A G +V+DVT TF V W +++ + +
Sbjct: 60 QIWDTAGQERFRTIAAAYYRGAQGIIMVYDVTEQETFSNVKGWITEIERYAS----EGVK 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+++ NK D + K+ E+ F+ + ETSAK++ N+++A + +
Sbjct: 116 KLIIGNKSDLVER-------KVVEYSIAKEFADSLSIPFIETSAKNSTNVEEAFTLMAKT 168
Query: 626 ILENDKVQANGDSHATSEAVFSLNRN-SQETKNGRNCAC 663
I + +++G S TS + RN SQE ++G CAC
Sbjct: 169 IKDECPEESSGASKTTS---VTPGRNLSQENESG-GCAC 203
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 107/181 (59%), Gaps = 15/181 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVE 115
Query: 571 CVLLANKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
++L NKCD K ++ + ID IK + ETSAK +IN+++A TL + I
Sbjct: 116 RMILGNKCDMNDKRQVSREKGEKLAIDYGIK------FLETSAKSSINVEEAFFTLARDI 169
Query: 627 L 627
+
Sbjct: 170 M 170
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 111/181 (61%), Gaps = 7/181 (3%)
Query: 446 SPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHE 505
+P+ + D+ ++L+KI++IG+ G GK++++ R+ FS ++TIGV+FA + + + +
Sbjct: 6 APWEQGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGK 65
Query: 506 TIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPD 565
I++ Q+WD AGQER+ +T YY+ AVGA +V+DVT+A TF+ V +W ++L D
Sbjct: 66 -IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDH---AD 121
Query: 566 GNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
N I +L+ NK D K + + F + S + ETSA D N+D A +T++ +
Sbjct: 122 SN-IVVMLIGNKID-LKHLRSVSLEDATSFAEREGLS-FVETSALDATNVDKAFQTVLTE 178
Query: 626 I 626
I
Sbjct: 179 I 179
>gi|431918954|gb|ELK17821.1| Ras-related protein Rab-3D [Pteropus alecto]
Length = 219
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++DV +F AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDVANQESFTAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + PA+ + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDLEDERVV--PAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICE 185
>gi|403267520|ref|XP_003925875.1| PREDICTED: ras-related protein Rab-3C [Saimiri boliviensis
boliviensis]
Length = 227
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--QHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 116/196 (59%), Gaps = 11/196 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + D + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA IV+D++R TFD+V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRW---LDELKTHSD-TTVAMMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 125 NKCDL--ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 635 NGDSHATSEAVFSLNR 650
N D++ +A SLNR
Sbjct: 183 NSDTY---KAELSLNR 195
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +FD + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A + + F + +FETSAK+ +N++ A + + + L +
Sbjct: 120 FVVLGNKVDVEESKRAISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 631 KVQ 633
+ Q
Sbjct: 180 ESQ 182
>gi|229367508|gb|ACQ58734.1| Ras-related protein Rab-7a [Anoplopoma fimbria]
Length = 207
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 116/213 (54%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +++ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFHRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKNNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L+RN + + C+C
Sbjct: 175 KQETEVELYNEFPEPIKLDRNERAKPSAETCSC 207
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 112/185 (60%), Gaps = 8/185 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+++IG+ GK++++ RY F + +ATIGV+F + + +D + I + Q+WD
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEI-KAQIWDT 66
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R TF++V +W +L D N I +L+
Sbjct: 67 AGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMH---SDMN-IVTMLVG 122
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA- 634
NKCD E + P + + + E + ETSA + N++DA + +++++ N +A
Sbjct: 123 NKCDL--ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKAL 180
Query: 635 NGDSH 639
N DS+
Sbjct: 181 NSDSY 185
>gi|4930237|pdb|3RAB|A Chain A, Gppnhp-bound Rab3a At 2.0 A Resolution
Length = 169
Score = 113 bits (282), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 102/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 61
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 62 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 117
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 118 NKCDMEDERVVS--SERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICE 168
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 113 bits (282), Expect = 3e-22, Method: Composition-based stats.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + + +EH + ETSAK NINI+ A L + IL+ + +
Sbjct: 122 NKCDMGDKRVVSK-ERGEAIAREHGIR-FMETSAKSNINIERAFCELAEAILD----KTS 175
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
G A + ++R + + G N C
Sbjct: 176 GRESAENPERVVIDRANSDKAPGYNKCC 203
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ L K++++G+ G GKTS++ +YV + FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MASHKKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV+ ++F ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D + I A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKVDLETKVIHGKKAQ--QWCQSKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 118/197 (59%), Gaps = 11/197 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+K+++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDV-KAQIWDT 69
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A GA +V+D++R +TFD V +W Q+L+ T D + +L+
Sbjct: 70 AGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELN---THSD-TTVAKMLVG 125
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD + I P + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 126 NKCDL--DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
Query: 635 NGDSHATSEAVFSLNRN 651
N DS+ +A SLNR+
Sbjct: 184 NSDSY---KAELSLNRD 197
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 7/180 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALK-VLSWDHETIIR 509
M +++ L K++++G+ G GKTS++K+YV + FS Y+ATIG DF+ K VL D + +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMKQYVDKEFSASYKATIGADFSTKEVLVDDRQ--VT 58
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
+QLWD AGQERF ++ +Y+ A +V+DV A +F+A+ W+ + + + D
Sbjct: 59 MQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNF 118
Query: 570 PCVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
P V++ NK D+ K I+N A F + +FETSAK+ IN+D A + + + L
Sbjct: 119 PFVVIGNKIDVDESKRVISNKRAM--TFCQSKGDIPYFETSAKEAINVDQAFEVIARNAL 176
>gi|194373731|dbj|BAG56961.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 101/176 (57%), Gaps = 14/176 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NKCD E + ++ + +H +FE SAKDNIN+ Q I NDK
Sbjct: 135 NKCDMEDERVVSSERG--RQLADHLGFEFFEASAKDNINVK-------QTIYRNDK 181
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
I+LQ+WD AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ +
Sbjct: 183 IKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWD 238
Query: 568 PIPCVLLANKCD 579
+L+ NKCD
Sbjct: 239 NAQVLLVGNKCD 250
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 116/196 (59%), Gaps = 11/196 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + D + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA IV+D++R TFD+V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRW---LDELKTHSD-TTVAMMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + + E + ETSA D+ N+ A + ++++I N +
Sbjct: 125 NKCDL--ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 635 NGDSHATSEAVFSLNR 650
N D++ +A SLNR
Sbjct: 183 NSDTY---KAELSLNR 195
>gi|126652803|ref|XP_001388379.1| Rab7 GTPase [Cryptosporidium parvum Iowa II]
gi|126117472|gb|EAZ51572.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II]
gi|323510277|dbj|BAJ78032.1| cgd7_1680 [Cryptosporidium parvum]
Length = 215
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 105/175 (60%), Gaps = 2/175 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
+++ L K++++G+ G GKTS++ +YV+ FS Y+ATIG DF K + D++ ++ LQ+
Sbjct: 9 NRKRVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVIDNK-LVTLQI 67
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++ +Y+ A +V+D+T +F+ + W+++ + T D N P V
Sbjct: 68 WDTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDPNSFPFV 127
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+L NK D ++ + K + K N +FETSAK+ N+D A + + ++ L
Sbjct: 128 VLGNKLDLDQKSRKVSSQKASAWCKSKNIE-YFETSAKNATNVDAAFEEIGRRAL 181
>gi|194695376|gb|ACF81772.1| unknown [Zea mays]
Length = 214
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 107/189 (56%), Gaps = 18/189 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + ++ + + L
Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W+++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGW---------FETSAKDNINIDDAAKT 621
VLL NK D + +++ + E W FETSAKD N++DA +
Sbjct: 120 FVLLGNKVD-----VDGGNSRV---VSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQC 171
Query: 622 LVQKILEND 630
+V+ L+N+
Sbjct: 172 IVKNALKNE 180
>gi|432950660|ref|XP_004084550.1| PREDICTED: ras-related protein Rab-35-like [Oryzias latipes]
Length = 201
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDYLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D P + +F ++ S FETSAK+N+N+++ + + +L
Sbjct: 115 RILVGNKNDDPGSKVVET-TDAQKFAEQMGIS-LFETSAKENVNVEEMFNCITELVLRAK 172
Query: 631 KVQANGDSHATSEAVFSLNRNSQETK 656
K V L RNS+ K
Sbjct: 173 KEVLAKQQQQQQNDVVKLTRNSKRKK 198
>gi|308160328|gb|EFO62821.1| Rab2b [Giardia lamblia P15]
Length = 227
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 110/183 (60%), Gaps = 12/183 (6%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSW----DHETIIRL 510
+++K +++G+ GK+ ++ R+V Q F P + T+GV+F K L E +++
Sbjct: 6 HHYIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTVKV 65
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL---PDG- 566
Q+WD AGQE+F ++TR YY+ A GA +V+DVT ++F+A+ W +D+ A V + P+G
Sbjct: 66 QIWDTAGQEQFRSITRSYYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGV 125
Query: 567 NPIPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK 625
+ + +L+ NK D + K ++ ++F ++H + ETSAKD++N+ ++ +
Sbjct: 126 SGMVIMLVGNKTDLEHKRKVSKEEG--EQFARDHGLL-FIETSAKDDLNVSESFNETARA 182
Query: 626 ILE 628
ILE
Sbjct: 183 ILE 185
>gi|301765878|ref|XP_002918360.1| PREDICTED: ras-related protein Rab-3C-like [Ailuropoda melanoleuca]
Length = 219
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--RHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 104/177 (58%), Gaps = 15/177 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K++V+G+ GKT ++ R+ F+ ++TIGV+F + L+ H ++ Q+WD
Sbjct: 31 DYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTL-HRKRVKAQIWDT 89
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+GA +V+DVTR ATF+ V +W ++L A DG+ L+
Sbjct: 90 AGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAH---ADGSSTVVALIG 146
Query: 576 NKCDQP---KEGIANNPAKIDEFIKEHN--FSGWFETSAKDNINIDDAAKTLVQKIL 627
NK D P +E A+ A++ E E FS E SA N++ A TL++++
Sbjct: 147 NKADMPAGRREVAADEAARLAE---EQGLFFS---EASALTGDNVERAFLTLLEEVF 197
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D+ ++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D++ I + Q+
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKI-KAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ AVGA IV+D+T+ ++FD V +W ++L D N I +
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDH---ADSN-IVIM 119
Query: 573 LLANKCDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE--N 629
L+ NK D ++ A+ F E+N S + ETSA D N+++A +T++ +I +
Sbjct: 120 LVGNKTDLLHLRAVSTEEAQ--AFAAENNLS-FIETSAMDASNVEEAFQTVLTEIFRIVS 176
Query: 630 DKVQANGDSHATSEAVFSLN 649
++ GD A A +LN
Sbjct: 177 NRAMEGGDEGAHPSAGQTLN 196
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + I+ +
Sbjct: 1 MATRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRIVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D ++ A+ ++ + N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRAVSAKRAQ--QWGQLKNNIPYFETSAKEAINVEQAFQTIAKNAL 174
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 11/195 (5%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L H+++
Sbjct: 7 YGDQSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L + D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSH---ADKN 122
Query: 568 PIPCVLLANKCDQPKEGIA-NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
I +L+ NKCD + + AK EF ++ + ETSA ++ N++ A T++ +I
Sbjct: 123 -IVIILVGNKCDLESQRVVPTEDAK--EFAQKEGLF-FLETSALESTNVETAFLTVLTEI 178
Query: 627 LE--NDKVQANGDSH 639
N K A D+
Sbjct: 179 FNIVNKKTLAGADNQ 193
>gi|27469883|gb|AAH41759.1| RAB35 protein, partial [Xenopus laevis]
Length = 227
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 27 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 85
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + + +
Sbjct: 86 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-----QNCDDVC 140
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ + D F F+G FETSAK+N+N+++ + +
Sbjct: 141 RILVGNKNDDPERKVVETE---DAF----KFAGQMDIQLFETSAKENLNVEEMFNCITEL 193
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
+L K V L++NS+ K R C
Sbjct: 194 VLRAKKDNLAKQQQQQQNDVVKLSKNSKRKK--RCC 227
>gi|84998352|ref|XP_953897.1| Rab GTPAse [Theileria annulata]
gi|65304895|emb|CAI73220.1| Rab GTPAse, putative [Theileria annulata]
Length = 210
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 10/177 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ R+ + F P + TIGV+F + ++ E I +LQ+WD
Sbjct: 5 KYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +VFD++R +TF+ + KW +++ G+P + +L+
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTKWLEEVRDH-----GSPTMSIILI 118
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NK D + + K +F +++ + ETSAK + N++ A T + I EN K
Sbjct: 119 GNKTDVASREVEYHEGK--QFADQNDLI-YMETSAKGDYNVEAAFLTTAELIYENVK 172
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+KIL+IG+ G GK+ ++ R+ FS Y TIGVDF +K L + I +L
Sbjct: 1 MAQEFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+DVT +F+ + +W ++ +GN P
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQWLNEI-------EGNASP 112
Query: 571 CV---LLANKCDQ-PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
V L+ NK D+ + ++ A EF K+ +FETSAK +IN++ A L Q I
Sbjct: 113 NVVKMLIGNKADKDATKAVSTEQAA--EFAKQEGMK-FFETSAKQSINVEAAFLELAQDI 169
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 135 NKCDMEDERVISTERG--KHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 185
>gi|225718862|gb|ACO15277.1| Ras-related protein Rab-7a [Caligus clemensi]
gi|225719168|gb|ACO15430.1| Ras-related protein Rab-7a [Caligus clemensi]
Length = 205
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQ-LVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A + +DVT +F ++ W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDTNSFSSLESWRDEFLIQASPSDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D +++ A+ ++ N +FETSAK+ IN++ A T+ + L
Sbjct: 120 FVVLGNKVDLENRAVSSKRAQ--QWCHSKNEVPYFETSAKEAINVEQAFLTIAKNAL 174
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 100/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILVG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVISTERG--KHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 24/201 (11%)
Query: 432 AGKTSITNGS-SKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRAT 490
+G S+TN S S+E P + + L KILVIG+ G GK+ ++ R+ F+ Y +T
Sbjct: 10 SGSFSVTNNSTSQESHP------EYDMLLKILVIGDSGVGKSCMLLRFADNRFTDSYIST 63
Query: 491 IGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAV 550
IGVDF ++ + D + I +LQ+WD AGQERF +T YY+ A G IV+D+T +F+++
Sbjct: 64 IGVDFCIRTIELDGKRI-KLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSI 122
Query: 551 LKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKID-----EFIKEHNFSGWF 605
+W D+D + P + +++ NKCD NN +D +F E N
Sbjct: 123 KRWLIDVD-RFASP---SVLKLIVGNKCD------LNNKRAVDFKIAKKFSDELNIP-IL 171
Query: 606 ETSAKDNINIDDAAKTLVQKI 626
ETSAKD+ ID+A L I
Sbjct: 172 ETSAKDSTGIDEAFTKLAADI 192
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 7/182 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + + + +EH + ETSAK NINID A L + IL+ +
Sbjct: 122 NKCDMSDKRTVSK-ERGETIAREHGIR-FMETSAKANINIDKAFNDLAEAILDKTAGREP 179
Query: 636 GD 637
GD
Sbjct: 180 GD 181
>gi|327265951|ref|XP_003217771.1| PREDICTED: ras-related protein Rab-7a-like [Anolis carolinensis]
gi|387017942|gb|AFJ51089.1| ras-related protein Rab-7a-like [Crotalus adamanteus]
Length = 207
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|224066111|ref|XP_002198172.1| PREDICTED: ras-related protein Rab-7a [Taeniopygia guttata]
Length = 207
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 11/182 (6%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ RY FS +ATIGV+F + L DH+++
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+TR TFD + +W ++L A D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAH---ADKN 122
Query: 568 PIPCVLLANKCDQ-PKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
I +L+ NK D + I AK EF KE F + ETSA + N++ A T++ +
Sbjct: 123 -IVIILIGNKSDLVDQRAIPTEDAK--EFAEKEGLF--FLETSAFNATNVESAFSTVLTE 177
Query: 626 IL 627
I
Sbjct: 178 IF 179
>gi|444706400|gb|ELW47742.1| Solute carrier family 26 member 9 [Tupaia chinensis]
Length = 1191
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIMLD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF ++ +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 69 RFRSVVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPVEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
+ A+ ++ KE + +FE SAK++IN+ A + L + L QA
Sbjct: 128 LADRKVPQELAQ--DWCKEKDIP-YFEVSAKNDINVVQAFEMLAGRALSRGATQA 179
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 104/176 (59%), Gaps = 7/176 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYAT----SGVM 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD + + + A EF + ETSA + N++ A + ++I
Sbjct: 116 KLLVGNKCDLTDKKVV-DYAVAKEFADSRGIK-FLETSASQSTNVEQAFIVMSKQI 169
>gi|348520672|ref|XP_003447851.1| PREDICTED: ras-related protein Rab-15-like [Oreochromis niloticus]
Length = 211
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 16/220 (7%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + +FL+++L++G+ G GKT +++R+ F + +TIG+DF +K L D T +R+
Sbjct: 1 MAKQYDFLFRLLMLGDSGVGKTCMLRRFTESDFDTTHISTIGIDFKMKTLEVDG-TKVRV 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T+ YY+ A G V+D+T +F + KW D+D T +
Sbjct: 60 QIWDTAGQERYQTITKQYYRRAQGIIFVYDITDKLSFKHIAKWVSDVDEYTT----QKME 115
Query: 571 CVLLANKCDQP--KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD +E N K+ +FETSA NINI ++ K L + +L+
Sbjct: 116 TILIGNKCDDSLRREVSKNQGTKLAGSYGME----FFETSASKNINISESFKRLTELVLQ 171
Query: 629 N-----DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
D + + DS+ + ++ R+CAC
Sbjct: 172 AHKRDVDNLLGSLDSYLDKAGLEEDKESTVPHCPQRSCAC 211
>gi|294888433|ref|XP_002772463.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
gi|239876689|gb|EER04279.1| RAB6 protein, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 12/207 (5%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
+K++ +G+ GKTSII R+++ F HY+ATIG+DF KV++ D +I+LQLWD AGQ
Sbjct: 19 HKVIFLGDQSVGKTSIITRFLYGAFDTHYQATIGIDFVAKVITLDDGRMIKLQLWDTAGQ 78
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKW-KQDLDAKVTLPDGNPIPCVLLANK 577
ERF ++ Y ++ +VFD++ +F++V W Q D K T + VL+ NK
Sbjct: 79 ERFRSLIPAYLRDTAACVVVFDLSSKESFNSVRSWVDQVRDEKGT---NGGVEIVLVGNK 135
Query: 578 CDQPK-EGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANG 636
D ++N A + E +FETSAK I+ID+ + + I E D V
Sbjct: 136 ADMADLRQVSNEEASA---LAEELGLKYFETSAKSGIDIDEIFTEIAKSIPEEDPVVGGS 192
Query: 637 DSHATSEAVFSLNRNSQETKNGRNCAC 663
++ + S + S ++C C
Sbjct: 193 NTIKVT----SGDELSNAAAKSQSCGC 215
>gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|147905326|ref|NP_001083352.1| RAB7A, member RAS oncogene family [Xenopus laevis]
gi|38014729|gb|AAH60401.1| MGC68523 protein [Xenopus laevis]
gi|51704077|gb|AAH80905.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267364|emb|CAJ82793.1| rab7,member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 207
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A++ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKVDLENRQVTTKRAQV--WCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|348680772|gb|EGZ20588.1| hypothetical protein PHYSODRAFT_465114 [Phytophthora sojae]
Length = 360
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 23/233 (9%)
Query: 400 RKKHNEPKPFTSPNSSSNGEKETAASPNTSVVAGKTSITNGSS--KEVSPYSKMPDKREF 457
R++H+ + +S S G +ETA++P + + S+ + SP ++ P
Sbjct: 42 RQQHDLRRSISSTQFS--GGRETASNPAAAGATASAGAMSASNSPRCSSPMAESPMAESI 99
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
L K+++IG+ G GK++++ R+ + PH T+G +FA K + + ++ Q+WD AG
Sbjct: 100 L-KVVLIGDSGVGKSNLVMRFTKNKYMPHSVQTVGFEFATKTIRVG-DRRLKAQIWDTAG 157
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANK 577
QERF ++T YY+ AVGA IV+D+T ++F+ V W A+V + +L+ NK
Sbjct: 158 QERFQSLTAAYYRNAVGAMIVYDITNRSSFEHVTGWL----AQVHEHSHESLVLILVGNK 213
Query: 578 CDQPKEGIANNP-------AKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
CD +A+ P + F +H+ + ETSA D+ N+ DA K L+
Sbjct: 214 CD-----LAHLPESREVSTLEAARFAAKHSME-FLETSALDSTNVVDAFKKLI 260
>gi|148686490|gb|EDL18437.1| RAB3C, member RAS oncogene family, isoform CRA_c [Mus musculus]
Length = 225
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILAG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 141 NKCDMEDERVVSTERG--QRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 191
>gi|357624129|gb|EHJ75014.1| putative Ras-related protein Rab-27A [Danaus plexippus]
Length = 209
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 10/176 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI---IRLQL 512
++L K+L +G+ G GKTS + +Y F + +T+G+DF K + + + I LQL
Sbjct: 4 DYLIKLLCVGDSGVGKTSFLYKYTDGVFHTQFISTVGIDFREKTVIYQQNSRQHRIHLQL 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++T +Y++A+G ++FD+T A+F V W + L +L D I V
Sbjct: 64 WDTAGQERFRSLTTAFYRDAMGFLLLFDLTNEASFLEVRNWIEQLKTH-SLSDDPDI--V 120
Query: 573 LLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L +KCD Q K + N A+ EF K +N + ETSAK NI+ A + L+ +I+
Sbjct: 121 LCGHKCDLQEKRLVNQNRAR--EFAKNYNLP-YLETSAKTGQNIERATEILLDRIM 173
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+D+T +F+ V +W Q++D + + N +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEID-RYACENVNKL- 117
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
L+ NKCD K + N AK E+ + + ETSAK + N++ A T+ +I
Sbjct: 118 --LVGNKCDLTSKRAVEYNSAK--EYADQLGIP-FLETSAKSSTNVEQAFLTMAAEI 169
>gi|312068043|ref|XP_003137028.1| small GTP binding protein [Loa loa]
Length = 209
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 13/212 (6%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P + L+K+L+IG+ G GK+S++ R+ FSP+Y TIGVDF ++ ++ + + + +LQ
Sbjct: 7 PRDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSPNYITTIGVDFKIRTVTINGQRV-KLQ 65
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
+WD AGQERF +T YY+ G +V++VT +F V +W ++D +
Sbjct: 66 IWDTAGQERFRTITSTYYRGTHGVIVVYEVTSGDSFSNVKRWLHEIDTNC-----ENVQK 120
Query: 572 VLLANKCDQPKEGIA--NNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
VL+ NK D P+ + + + E +K +FETSAK+NIN+++ + + +LE
Sbjct: 121 VLVGNKADDPERRVVLEVDARRFAETMK----IPFFETSAKENINVEEMFNCITRLVLEA 176
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNC 661
K++A + A S L +S R C
Sbjct: 177 -KLRAPQPNIADSGGGVRLGGSSLRRHEKRKC 207
>gi|410924594|ref|XP_003975766.1| PREDICTED: ras-related protein Rab-3A-like [Takifugu rubripes]
Length = 219
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 7/208 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + + I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPTFVSTVGIDFKVKTI-YRSDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + + + + + F +FETSAKDNIN+ + LV I E +
Sbjct: 134 NKCDMEDERVVAS-QRGQQLSDQLGFE-FFETSAKDNINVKQTFERLVDIICERMSESLD 191
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + A N Q ++ ++CAC
Sbjct: 192 NNDPTITGAKQGPQLNEQPQRSHQDCAC 219
>gi|148234955|ref|NP_001079974.1| RAB35, member RAS oncogene family [Xenopus laevis]
gi|34784624|gb|AAH57747.1| MGC69101 protein [Xenopus laevis]
Length = 201
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P K+ E + F+ FETSAKDN+N+++ + +
Sbjct: 115 RILVGNKNDDPDR-------KVVETEDAYKFAAQMDIRLFETSAKDNLNVEEMFNCITEL 167
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETK 656
+L K V LN+NS+ K
Sbjct: 168 VLRAKKDNLAKQQQQQQNDVVKLNKNSKRKK 198
>gi|62858521|ref|NP_001016372.1| RAB15, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267008|emb|CAJ81786.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213624493|gb|AAI71178.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
gi|213625715|gb|AAI71180.1| RAB15, member RAS onocogene family [Xenopus (Silurana) tropicalis]
Length = 212
Score = 112 bits (281), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 108/188 (57%), Gaps = 11/188 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + + L+++L+IG+ G GKT ++ R+ F P + +TIGVDF +K + D +R+
Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTIEVDG-IKVRI 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T+ YY+ A G F+V+D+T ++ ++KW D+D PDG +
Sbjct: 60 QIWDTAGQERYQTITKQYYRRAQGIFLVYDITSERSYQHIMKWASDVDEYA--PDG--VQ 115
Query: 571 CVLLANKCD--QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D Q ++ N K+ E E+ +FETSA N NI ++ L + +L
Sbjct: 116 KILIGNKADEEQKRQVGKNQGMKLAE---EYGMD-FFETSACTNYNIKESFTRLTELVLM 171
Query: 629 NDKVQANG 636
K + G
Sbjct: 172 AHKRELEG 179
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 106/180 (58%), Gaps = 15/180 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----ADVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
++L NKCD K ++ + + +D IK + ETSAK NIN+++A TL + I
Sbjct: 116 RMILGNKCDVNDKRQVSKDRGEKLALDYGIK------FMETSAKANINVEEAFLTLARDI 169
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 108/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F++V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNSVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCDQP-KEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NK D K + + AK EF E N + ETSA D+ N+++A T+ ++I E
Sbjct: 116 KLLVGNKSDMTDKRVVEYDVAK--EF-AEQNKMPFLETSALDSTNVEEAFLTMARQIKE 171
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 107/184 (58%), Gaps = 5/184 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R+ L K++++G+ G GKTS++ +YV++ F+ Y+ATIG DF K + D + ++ +
Sbjct: 1 MSARRKVLLKVIILGDSGVGKTSLMNQYVNKKFTSQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT A TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL--E 628
V++ NK D + A+ + + N ++ETSAK+ +N+D A + + + L E
Sbjct: 120 FVVIGNKIDLENRQVPARRAQ--NWCESKNNIPYYETSAKEAVNVDQAFQKIARDALAKE 177
Query: 629 NDKV 632
ND +
Sbjct: 178 NDDI 181
>gi|410918321|ref|XP_003972634.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 221
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 458 LYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAG 517
++K+L+IG GKTS + RY F+ + +T+G+DF +K + + + T ++LQ+WD AG
Sbjct: 24 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTI-YRNNTRVKLQIWDTAG 82
Query: 518 QERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDL------DAKVTLPDGNPIPC 571
QER+ +T YY+ A+G +++D+T +F AV W + DA+V
Sbjct: 83 QERYRTITTAYYRGAMGFLLMYDITSQESFCAVQDWATQIKTYSWGDAQV---------- 132
Query: 572 VLLANKCDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D +E + A+ E F +FE SAKDNIN+ + +LV I E
Sbjct: 133 VLVGNKADLEEERQVPTEDAQ--RLATELGFR-FFEASAKDNINVKEVFDSLVDAICEKM 189
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K NGD +S N N + + R+CAC
Sbjct: 190 KEGPNGDETPSSGNK-GPNLNETPSPSQRSCAC 221
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|444320471|ref|XP_004180892.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
gi|387513935|emb|CCH61373.1| hypothetical protein TBLA_0E03190 [Tetrapisispora blattae CBS 6284]
Length = 207
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +T IRLQLWD AGQ
Sbjct: 9 YKIVFLGEQGVGKTSLITRFMYDTFDEHYQATIGIDFLSKTMYLDDKT-IRLQLWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A +V+D+T+ +F+ + KW QD+ K D I C+ + NK
Sbjct: 68 ERFRSLIPSYIRDSRVAIVVYDITKKKSFEYIDKWIQDV--KNERGDDGVILCI-VGNKS 124
Query: 579 D-QPKEGIAN----NPAKI---DEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
D + ++N N AK+ D F+ ETS K N+ + K + + + E +
Sbjct: 125 DLSDQRQVSNEEGENKAKLLGADIFM---------ETSTKAGYNVKNLFKKIAKSLPEFE 175
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ N + V + N +E K C C
Sbjct: 176 NTEGNPLENEERAGVIDIGEN-EEPKQEAGCQC 207
>gi|350411512|ref|XP_003489373.1| PREDICTED: ras-related protein Rab-3-like [Bombus impatiens]
Length = 270
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%), Gaps = 22/215 (10%)
Query: 429 SVVAGKTSITN-GSSKEVSPYSKMP--------------DKREFLYKILVIGELGAGKTS 473
SV+ +T +T S +++P+SK+P ++++K+L+IG GKTS
Sbjct: 24 SVLELRTRMTRLMSIVDITPHSKLPMAGQDPKFQKEAADQNFDYMFKLLIIGNSSVGKTS 83
Query: 474 IIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAV 533
+ RY F+ + +T+G+DF +K + + H+ ++LQ+WD AGQER+ +T YY+ A+
Sbjct: 84 FLFRYADDSFTSAFVSTVGIDFKVKTV-FRHDKRVKLQIWDTAGQERYRTITTAYYRGAM 142
Query: 534 GAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKID 593
G +++D+T +F++V W + K D + +L+ NKCD E +
Sbjct: 143 GFILMYDITNEESFNSVQDWVTQI--KTYSCDNAQV--ILVGNKCDMEDERVITTERG-- 196
Query: 594 EFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+ + + +FETSAK+NINI + LV I +
Sbjct: 197 KQLADQLGVQFFETSAKENINIKTVFEQLVDIICD 231
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D ++ A+ ++ N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRAVSTKRAQ--QWCHSKNEVPYFETSAKEAINVELAFQTIARNAL 174
>gi|71033513|ref|XP_766398.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353355|gb|EAN34115.1| GTP-binding protein rab2, putative [Theileria parva]
Length = 215
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 106/177 (59%), Gaps = 10/177 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ R+ + F P + TIGV+F + ++ E I +LQ+WD
Sbjct: 5 KYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQI-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +VFD++R +TF+ + KW +++ G+P + +L+
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTKWLEEVRDH-----GSPTMSIILI 118
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
NK D + + K +F +++ + ETSAK + N++ A T + I EN K
Sbjct: 119 GNKTDVASREVEYHEGK--QFADQNDLI-YMETSAKGDYNVEAAFLTTAELIYENVK 172
>gi|350417672|ref|XP_003491537.1| PREDICTED: ras-related protein Rab-35-like [Bombus impatiens]
Length = 201
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 113/206 (54%), Gaps = 9/206 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + + L+K+L+IG+ G GK+S++ R+ F+ Y TIGVDF ++ + D E + +L
Sbjct: 1 MAREYDHLFKLLIIGDSGVGKSSLLLRFADNTFNGSYITTIGVDFKIQTVDIDGERV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSGDSFANVKRWLHEIEQNCDV-----VN 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D P E + F + FETSAKDNIN+ + + +++L
Sbjct: 115 RVLVGNKNDAPNEKVVLT-EDAQRFANQMGIQ-LFETSAKDNINVQEMFMAITRQVLRTK 172
Query: 631 KVQANGDSHATSEAVFSLNRNSQETK 656
K + + TSE V +L +++++ K
Sbjct: 173 KERKERQAIQTSETV-NLRKSTKQHK 197
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 104/184 (56%), Gaps = 6/184 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K+ L K++++G+ G GKTS++ +YV + F+ Y+ATIG DF K + D + + +
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVT-M 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDV A +FD + W+ + + PD + P
Sbjct: 60 QIWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFP 119
Query: 571 CVLLANKCDQ---PKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++L NK D+ ++ AK + +FETSAK++IN++ A + + L
Sbjct: 120 FMVLGNKIDENGGSSRQVSEKKAK--AWCASKGSIPYFETSAKEDINVEAAFTCITRNAL 177
Query: 628 ENDK 631
N+K
Sbjct: 178 RNEK 181
>gi|50754381|ref|XP_414359.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Gallus gallus]
gi|326927938|ref|XP_003210144.1| PREDICTED: ras-related protein Rab-7a-like [Meleagris gallopavo]
gi|363738555|ref|XP_003642026.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Gallus gallus]
gi|449276664|gb|EMC85096.1| Ras-related protein Rab-7a [Columba livia]
Length = 207
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 104/180 (57%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 10/209 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 23 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FRNDKRIKLQIWDT 81
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F AV QD ++ + +L+
Sbjct: 82 AGQERYRTITTAYYRGAMGFLLMYDITNQDSFKAV----QDWATQIKTYSWDNAQVILVG 137
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + + P + + + E +FE SAKDNIN+ + LV I +
Sbjct: 138 NKCDLEDDRLV--PTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDIICDKMSESME 195
Query: 636 GDSH-ATSEAVFSLNRNSQETKNGRNCAC 663
GD++ +S+ SL + E+ G CAC
Sbjct: 196 GDNNFLSSQGKQSLKDSPSESSGG--CAC 222
>gi|145513861|ref|XP_001442841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834271|emb|CAI44501.1| rab_C34 [Paramecium tetraurelia]
gi|124410202|emb|CAK75444.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 118/204 (57%), Gaps = 12/204 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L K++V+G+ G GKT+I+ ++ Q FS +Y ATIGVDF +K+L+ + I+LQ+WD
Sbjct: 7 DWLVKVIVLGDSGVGKTNILTQFCDQKFSQNYTATIGVDFKIKILN-VQDKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF N+T+ YYK A G V+ + +F+ V W + + T + + +L+
Sbjct: 66 AGQERFRNITQTYYKGAFGIIFVYSLIDRNSFNNVEGWIKSILESTT----DEVCSILVG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI---LENDKV 632
NK D + A+ ++ +++N + ETSA +N NI D L Q + LEN+
Sbjct: 122 NKLDSQDRRVQ--TAEGEKLAQKYNMP-FIETSALENKNIQDIFDRLGQNLKIRLENEGQ 178
Query: 633 QANGDSHATSEAVFSLNRNSQETK 656
+ + ++H T F LN+ + +T+
Sbjct: 179 KVSNNTH-TQSGQFKLNQEANQTE 201
>gi|313229766|emb|CBY18581.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 18/211 (8%)
Query: 460 KILVIGELGAGKTSIIKRYV---HQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIA 516
++++IG+ G GKTS + R+V F + T+G+DF +K + D + + +LQ+WD A
Sbjct: 8 QLIIIGDSGVGKTSFMDRFVDSSQADFRQSFNPTVGIDFKVKNILVDDKRV-KLQIWDTA 66
Query: 517 GQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLAN 576
GQE+F ++T YY+ A GA I++DVTR TF ++ KW Q + + L+ N
Sbjct: 67 GQEKFNSITTAYYRSARGAIIMYDVTRPQTFKSIEKWYQLMSDH----GRGDVEVALVGN 122
Query: 577 KCDQPKEGIANNPAKIDEFIKEHNFS----GWFETSAKDNINIDDAAKTLVQKILENDKV 632
KCD N+ K+D E+ + ++E+SAKDN+NI++ LV+ IL N +
Sbjct: 123 KCD------LNSDKKVDSKQGENTATELGCHFYESSAKDNLNIENVFMGLVRNILVNMPL 176
Query: 633 QANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ D+ + +LN S+ G +C C
Sbjct: 177 ERPPDAAGDRGSTATLNLESKPLPAGGSCPC 207
>gi|99032489|pdb|2GF9|A Chain A, Crystal Structure Of Human Rab3d In Complex With Gdp
Length = 189
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 101/178 (56%), Gaps = 7/178 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
+P ++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+L
Sbjct: 15 VPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKL 73
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQER+ +T YY+ A+G +++D+ +F AV QD ++ +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAV----QDWATQIKTYSWDNAQ 129
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD E + PA+ + + +FE SAK+NIN+ + LV I E
Sbjct: 130 VILVGNKCDLEDERVV--PAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICE 185
>gi|47216418|emb|CAG01969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 219
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 7/208 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPTFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEDSFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD +E + + + + + F +FE SAKDNIN+ + LV I E +
Sbjct: 134 NKCDMEEERVVAS-QRGRQLSDQLGFE-FFEASAKDNINVKQTFERLVDIICERMSESLD 191
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + A N Q ++ ++CAC
Sbjct: 192 NNDPTVTGAKQGPQLNEQPQRSHQDCAC 219
>gi|380449163|gb|AFD54570.1| Ras-related protein Rab7 [Litopenaeus vannamei]
Length = 205
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 106/177 (59%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ ++V++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKILLKVIJLGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF ++ W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V+L NK D ++ A+ ++ N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLXNKIDLENRAVSTKRAQ--QWCHSKNEXPYFETSAKEAINVELAFQTIARNAL 174
>gi|327282620|ref|XP_003226040.1| PREDICTED: ras-related protein Rab-35-like [Anolis carolinensis]
gi|387017966|gb|AFJ51101.1| ras-related protein Rab-35-like [Crotalus adamanteus]
Length = 201
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ K+ E + F+G FETSAK+NIN+++ + +
Sbjct: 115 RILVGNKNDDPER-------KVVETEDAYKFAGQMGIQLFETSAKENINVEEMFNCITEL 167
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETK 656
+L K V L +NS+ K
Sbjct: 168 VLRAKKDNLAKQQQQQQNDVVKLTKNSKRKK 198
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ +S Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G +V+D T +F+ V +W Q++D + + N +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLQEID-RYACENVNKL- 117
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
L+ NKCD + + + A E+ ++ + ETSAK+ N++ A T+ +I
Sbjct: 118 --LVGNKCDLSTKKVVDYAAA-KEYAEQLGIP-FLETSAKNATNVEQAFMTMAAEI 169
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 107/172 (62%), Gaps = 9/172 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + + + + II+ Q+WD
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGK-IIKAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA +V+D+T+ +FD V +W ++L D N I +L+
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDH---ADAN-IVIMLVG 124
Query: 576 NKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NK D Q + + + A E N + ETSA DN N+++A ++++ +I
Sbjct: 125 NKSDLQHLKAVTTDDASA---FAESNGLSFIETSALDNSNVEEAFRSILSEI 173
>gi|332024592|gb|EGI64790.1| Ras-related protein Rab-30 [Acromyrmex echinatior]
Length = 205
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+K++++G G GKT +++R+ F P ATIGVDF +K + ++E + +LQ+WD
Sbjct: 5 KFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVENEKV-KLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF ++T+ YY+ A +V+D++ TFD +L W ++++ + N + +L+
Sbjct: 64 AGQERFRSITQSYYRSAHALILVYDISCQPTFDCLLDWLREIEEYAS----NKVLRILVG 119
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NK D+ I P + E + + + ETSAK+ N++ + +++E + +
Sbjct: 120 NKIDREDREI---PTHVGEDFAQRHGMYFLETSAKEAENVERLFMEIAAELMEQARCKEL 176
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ S+N + + NC C
Sbjct: 177 PRYETNTT---SINGKTTSIGDSSNCGC 201
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
MP K++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + + +
Sbjct: 1 MPPKKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVT-V 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT +F+++ WK++ + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADPDSFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEH-NFSGWFETSAKDNINIDDAAKTLVQKILEN 629
V++ NK D+ +E + +K + F ++ N +FETSAK N+ A + + ++ +
Sbjct: 120 FVVVGNKVDE-REKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQ 178
Query: 630 DKVQ 633
+K Q
Sbjct: 179 EKQQ 182
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 19/197 (9%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+ + Q+WD
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV-KAQIWDT 74
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N I +L+
Sbjct: 75 AGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN-IVIILIG 130
Query: 576 NKCD-QPKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQKI------- 626
NKCD + + + AK EF KE F + ETSA + N++ A T++ +I
Sbjct: 131 NKCDLESQRDVPTEDAK--EFAEKEGLF--FLETSALEATNVETAFITVLTEIYNIVNKK 186
Query: 627 -LENDKVQANGDSHATS 642
L D+ Q NG+S + S
Sbjct: 187 NLTADENQGNGNSASLS 203
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ + Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W ++D + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYAS----ENVN 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+L+ NKCD P ++ AK F E + ETSAKD N++ A + I
Sbjct: 116 KLLVGNKCDLPNRAVSYESAK--AFADEVGIP-FMETSAKDATNVEQAFMAMTADI 168
>gi|256271753|gb|EEU06790.1| Ypt6p [Saccharomyces cerevisiae JAY291]
Length = 215
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +T IRLQLWD AGQ
Sbjct: 11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT-IRLQLWDTAGQ 69
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D+T+ +F+ + KW +D+ K D N I C+ + NK
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDV--KNERGDENVILCI-VGNKS 126
Query: 579 DQPKEGIANNPAKIDEFIKEHNFSG---WFETSAKDNINIDDAAKTLVQKI 626
D E +E K+ G + ETS K+ N+ K L +KI
Sbjct: 127 DLSDE----RQISTEEGEKKAKLLGAKIFMETSTKEGYNV----KALFKKI 169
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 61/176 (34%), Positives = 103/176 (58%), Gaps = 11/176 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D I +LQ+WD
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPI-KLQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +V+D+TR TF+ + W +D NP + +L+
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-----ANPNMSIMLI 117
Query: 575 ANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
NKCD K ++ ++F KEH + E SA+ N+++A KIL+N
Sbjct: 118 GNKCDLAHKRAVSKEEG--EQFAKEHGLL-FLEASARTAQNVEEAFIKTAAKILQN 170
>gi|290992188|ref|XP_002678716.1| rab family small GTPase [Naegleria gruberi]
gi|284092330|gb|EFC45972.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFD T A TF+ + W+ + + PD + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
V++ANK D + + A + K +FE SAK+ N++ A +T+ + L
Sbjct: 120 FVVIANKIDLDQRIVPQKRAL--AWCKAKGNIPYFECSAKEGTNVEQAFQTIARNAL 174
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 19/210 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +L
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + +
Sbjct: 60 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA----DVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQ-- 624
++L NKCD K ++ + +D IK + ETSAK NIN+++A TL +
Sbjct: 116 KMILGNKCDVNDKRQVSKERGEKLALDYGIK------FMETSAKANINVENAFFTLARDI 169
Query: 625 --KILENDKVQANGDSHATSEAVFSLNRNS 652
K+ +N K A G SH V R S
Sbjct: 170 KAKMDKNWKATAAGSSHGVKITVEQQKRTS 199
>gi|193652503|ref|XP_001951946.1| PREDICTED: ras-related protein Rab-35-like [Acyrthosiphon pisum]
Length = 202
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + D E + +L
Sbjct: 1 MAKEYDHLFKLLIIGDSGVGKSSLLVRFADNTFSGSYITTIGVDFKIRTVIVDGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DV+ +F V +W ++D + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVSNGDSFANVKRWLHEIDQNCEV-----VN 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D P + F + +ETSAKDNIN++ ++ +++L N
Sbjct: 115 RILVGNKNDAPDRKVVLT-EDAQRFADQMGIQ-LYETSAKDNINVEQMFMSITKQVLRNK 172
Query: 631 KVQANGDSHATSEAV 645
K +H ++ V
Sbjct: 173 KETKERQAHQNNDVV 187
>gi|224085264|ref|XP_002307527.1| predicted protein [Populus trichocarpa]
gi|118487254|gb|ABK95455.1| unknown [Populus trichocarpa]
gi|222856976|gb|EEE94523.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 102/184 (55%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ GAGKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSARRRTLLKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A ++ + L +
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCASKGNILYFETSAKEDYNVDPAFLSIAKTALAH 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHGQ 183
>gi|270005194|gb|EFA01642.1| hypothetical protein TcasGA2_TC007212 [Tribolium castaneum]
Length = 184
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 99/164 (60%), Gaps = 8/164 (4%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D +FL+K++++G G GKT +++R+ F P ATIGVDF +K + D+E ++LQ+
Sbjct: 2 DDYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVDVDNEK-VKLQI 60
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQERF ++T+ YY+ A +V+D++ TFD + W ++++ + + + V
Sbjct: 61 WDTAGQERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIEEYAS----SKVLRV 116
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINID 616
L+ NK D+ I + +EF + HN + ETSAK+ N++
Sbjct: 117 LVGNKIDREDREIPTHVG--EEFAERHNMY-FLETSAKEAENVE 157
>gi|334186419|ref|NP_001190694.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657386|gb|AEE82786.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 211
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L E ++ L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIG-EKLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKW-----KQDLDAKVTLPD 565
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W KQ + + D
Sbjct: 60 QIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMCPSD 119
Query: 566 GNPIPCVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLV 623
P ++L NK D + ++ D N +FETSAKD+ N+D+A T+
Sbjct: 120 PKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIP-YFETSAKDDFNVDEAFLTIA 178
Query: 624 QKILENDKVQ 633
+ L N+ Q
Sbjct: 179 KTALANEHEQ 188
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 106/186 (56%), Gaps = 6/186 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + + + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFP 119
Query: 571 CVLLANKCD---QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NK D +++ AK ++ +FETSAK+++N+D A + + L
Sbjct: 120 FILLGNKVDIDGGNSRVVSDKKAK--DWCASKGNVPYFETSAKEDLNVDAAFLRIAKTAL 177
Query: 628 ENDKVQ 633
N++ Q
Sbjct: 178 ANEREQ 183
>gi|301786120|ref|XP_002928475.1| PREDICTED: ras-related protein Rab-7b-like [Ailuropoda melanoleuca]
gi|281339452|gb|EFB15036.1| hypothetical protein PANDA_018434 [Ailuropoda melanoleuca]
Length = 200
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAK-TIPMEPSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ A+ + +E + +FE SAK++IN+ A + L + L
Sbjct: 128 LADRQVPQEVAQ--GWCREKDIP-YFEVSAKNDINVVQAFEMLASRAL 172
>gi|13470090|ref|NP_076341.1| ras-related protein Rab-3C [Mus musculus]
gi|51338595|sp|P62824.1|RAB3C_RAT RecName: Full=Ras-related protein Rab-3C
gi|51338605|sp|P62823.1|RAB3C_MOUSE RecName: Full=Ras-related protein Rab-3C
gi|12597437|gb|AAG60047.1|AF312037_1 small GTP binding protein Rab3C [Mus musculus]
gi|1304207|dbj|BAA11302.1| rab3C [Rattus norvegicus]
gi|12851806|dbj|BAB29172.1| unnamed protein product [Mus musculus]
gi|13027787|gb|AAK08980.1| small GTP-binding protein Rab3C [Mus musculus]
gi|13094065|emb|CAC32042.1| Rab3C [Mus musculus]
gi|26348082|dbj|BAC37689.1| unnamed protein product [Mus musculus]
gi|74216593|dbj|BAE37733.1| unnamed protein product [Mus musculus]
gi|74223648|dbj|BAE28694.1| unnamed protein product [Mus musculus]
gi|89130661|gb|AAI14336.1| RAB3C, member RAS oncogene family [Mus musculus]
gi|112292947|dbj|BAF02851.1| Rab3C [Mus musculus]
gi|148686488|gb|EDL18435.1| RAB3C, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149059322|gb|EDM10329.1| RAB3C, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 227
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 28 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 86
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L
Sbjct: 87 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILAG 142
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 143 NKCDMEDERVVSTERG--QRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 107/177 (60%), Gaps = 7/177 (3%)
Query: 450 KMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIR 509
++ ++ ++L+KI++IG+ G GK++I+ R+ F ++TIGV+FA + L D +T+ +
Sbjct: 4 RVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV-K 62
Query: 510 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPI 569
Q+WD AGQER+ +T YY+ AVGA +V+D+T+ +FD+V +W ++L D N I
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGH---ADAN-I 118
Query: 570 PCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+++ NK D + + P + E + ETSA + IN++ A T++ +I
Sbjct: 119 VVMMVGNKSDLNH--LRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEI 173
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 131/225 (58%), Gaps = 15/225 (6%)
Query: 445 VSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDH 504
+S Y + D ++L+K+++IG+ G GK++++ R+ FS ++TIGV+FA + L+ D
Sbjct: 1 MSAY-RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDG 59
Query: 505 ETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLP 564
+ +I+ Q+WD AGQER+ +T YY+ AVGA +V+DVTR +T++ V KW ++L T P
Sbjct: 60 K-VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDH-TDP 117
Query: 565 DGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDA-AKTLV 623
+ I +L+ NK D + +A + F + + + ETSA + N+D+A A+ L
Sbjct: 118 N---IVVMLVGNKSD-LRHLVAVSTEDAKSFAETESLY-FMETSALEATNVDNAFAEVLT 172
Query: 624 Q--KILENDKVQANGDSHATSEAV----FSLNRNSQETKNGRNCA 662
Q I+ ++ N D+ A++ ++++ E K G C+
Sbjct: 173 QIYHIVSKKAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCS 217
>gi|221116505|ref|XP_002158899.1| PREDICTED: ras-related protein Rab-35-like [Hydra magnipapillata]
Length = 203
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+SI+ R+ FS Y TIGVDF ++ ++ D E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSILLRFADDMFSGSYITTIGVDFKIRTINIDGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W ++D + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNAESFVNVKRWLHEIDQNCDV-----VN 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
VL+ NK D K + + F + FETSAKDN+NI+ + +L +
Sbjct: 115 KVLVGNKNDCLKNKVVDT-QDAKTFAAQMGVE-VFETSAKDNLNIEQVFSHITAMVLRSK 172
Query: 631 KVQ 633
+ Q
Sbjct: 173 REQ 175
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 103/181 (56%), Gaps = 17/181 (9%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT TF+ V +W Q++D +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYAC----ESVN 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NKCD + K+ ++ F+ + ETSAK+ N++ A T+ +
Sbjct: 116 KLLVGNKCDLTTK-------KVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAE 168
Query: 626 I 626
I
Sbjct: 169 I 169
>gi|118094547|ref|XP_422470.2| PREDICTED: ras-related protein Rab-3C [Gallus gallus]
Length = 219
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 18/213 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + ++ ++LQ+WD
Sbjct: 20 DYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTV-YRNDKRVKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITSEDSFNAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E I P + + + + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDMEDERII--PLEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESIE 192
Query: 636 GD-SHATSEAVFSLNRNSQETKN----GRNCAC 663
D S TS RN + T N +NC+C
Sbjct: 193 SDPSRGTS------GRNVRLTDNPPPSQQNCSC 219
>gi|431892879|gb|ELK03307.1| Ras-related protein Rab-7b [Pteropus alecto]
Length = 236
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKI-IPVEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
++ A+ + KE + +FE SAK++IN+ A +TL + L
Sbjct: 128 LADRQVSREVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFETLAGQAL 172
>gi|395850861|ref|XP_003797992.1| PREDICTED: ras-related protein Rab-3D [Otolemur garnettii]
Length = 219
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+P + +T+G+DF +K + + H+ I+LQ+WD
Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTV-YRHDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++DV +F AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTTYYRGAMGFLLMYDVANQESFTAV----QDWATQIKTYSWDNAQVILVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + PA+ + +FE SAK+NIN+ + LV I E
Sbjct: 135 NKCDLEDERVV--PAEDGRRLANDLGFEFFEASAKENINVKQVFERLVDVICE 185
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 449 SKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETII 508
S M + ++L+K+L+IG+ G GK+ ++ R+ ++ Y +TIGVDF ++ + D +TI
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI- 60
Query: 509 RLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP 568
+LQ+WD AGQERF +T YY+ A G +V+DVT +F+ V +W Q++D +
Sbjct: 61 KLQIWDTAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYAS----EN 116
Query: 569 IPCVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
+ +L+ NKCD K+ + AK EF + ETSAK+ N++ A T+ +I
Sbjct: 117 VNKLLVGNKCDLTTKKVVDYTTAK--EFADSLGIP-FLETSAKNATNVEQAFMTMAAEI 172
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 107/182 (58%), Gaps = 11/182 (6%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ RY FS +ATIGV+F + L DH+++
Sbjct: 7 YGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+TR TFD + +W ++L A D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAH---ADKN 122
Query: 568 PIPCVLLANKCDQ-PKEGIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
I +L+ NK D + I A+ EF KE F + ETSA + N++ A T++ +
Sbjct: 123 -IVIILIGNKSDLVDQRAIPTEDAR--EFAEKEGLF--FLETSAFNATNVESAFSTVLSE 177
Query: 626 IL 627
I
Sbjct: 178 IF 179
>gi|223649382|gb|ACN11449.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + +FETSAK+ IN+D A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQE 177
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 61/176 (34%), Positives = 103/176 (58%), Gaps = 11/176 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K ++IG+ G GK+ ++ ++ + F P + TIGV+F ++++ D I +LQ+WD
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPI-KLQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLL 574
AGQE F ++TR YY+ A GA +V+D+TR TF+ + W +D NP + +L+
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQH-----ANPNMSIMLI 117
Query: 575 ANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
NKCD K ++ + +F KEH + E SA+ N+++A KIL+N
Sbjct: 118 GNKCDLAHKRAVSKEEGQ--QFAKEHGLL-FLEASARTAQNVEEAFIETAAKILQN 170
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 8/214 (3%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ G GK+ ++ R+ ++P Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W Q++D T +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYAT----GGVM 115
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
+L+ NK D + I A EF N + ETSA + N++ A T+ ++I
Sbjct: 116 KLLVGNKADLADKKIVEYTAA-KEFADALNIP-FLETSALSSTNVEQAFYTMARQIKAQM 173
Query: 631 KVQANGDSHATSEAVFSLN-RNSQETKNGRNCAC 663
AN A ++ ++N R T N C
Sbjct: 174 TSNANVGGAAGNKGKSNVNLRGESLTSTQSNSCC 207
>gi|333466057|gb|AEF33797.1| Rab7 [Fenneropenaeus chinensis]
Length = 237
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 116/202 (57%), Gaps = 4/202 (1%)
Query: 427 NTSVVAGKTSITNGSSKEVS-PYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSP 485
+ +++ G + G +S P M +++ L K++++G+ G GKTS++ ++V++ FS
Sbjct: 8 DIAILTGSAVLQLGFLLFISLPKYIMASRKKILLKVIILGDSGVGKTSLMNQFVNKKFSN 67
Query: 486 HYRATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAA 545
Y+ATIG DF K + D + ++ +Q+WD AGQERF ++ +Y+ A +V+DVT
Sbjct: 68 QYKATIGADFLTKEVMVD-DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVTSPN 126
Query: 546 TFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWF 605
TF ++ W+ + + + D + P V+L NK D ++ A+ ++ N +F
Sbjct: 127 TFKSLDSWRDEFLIQASPRDPDHFPFVVLGNKIDLENRAVSTKRAQ--QWCHSKNEVPYF 184
Query: 606 ETSAKDNINIDDAAKTLVQKIL 627
ETSAK+ IN++ A +T+ + L
Sbjct: 185 ETSAKEAINVELAFQTIARNAL 206
>gi|312372342|gb|EFR20324.1| hypothetical protein AND_20302 [Anopheles darlingi]
Length = 192
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 110/189 (58%), Gaps = 4/189 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++V+G+ GKTS++ +YV++ FS Y+ATIG DF K + D E ++ +
Sbjct: 1 MASRKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVID-ERVVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D T TF + W+ + + + D + P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK-ILEN 629
V+L NK D ++ A+ ++ + N +FETSAK+ IN+D A +T+ + I +
Sbjct: 120 FVVLGNKIDLENRAVSTKRAQ--QWCQAKNNIPYFETSAKEGINVDLAFQTIAKNAIAQE 177
Query: 630 DKVQANGDS 638
+V G++
Sbjct: 178 TEVSGAGEA 186
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D + A+ + + + +FETSAK+ IN+D A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVTTKRAQ--AWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQE 177
>gi|21704002|ref|NP_663484.1| ras-related protein Rab-7b [Mus musculus]
gi|50401091|sp|Q8VEA8.1|RAB7B_MOUSE RecName: Full=Ras-related protein Rab-7b
gi|26326669|dbj|BAC27078.1| unnamed protein product [Mus musculus]
gi|112293051|dbj|BAF02903.1| Rab42 [Mus musculus]
gi|148707757|gb|EDL39704.1| RIKEN cDNA 5430435G22, isoform CRA_c [Mus musculus]
Length = 199
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 104/180 (57%), Gaps = 7/180 (3%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K++++G LG GKTS++ +YVH+ F Y+ T+G K++ D +T ++LQ+WD GQE
Sbjct: 10 KLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILD-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK+ +P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKI-IPMEQSYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQANGDSH 639
++ + + KE + +FE SAK++IN+ A + L + L + Q ++H
Sbjct: 128 LEDRKVSQEV--VHGWCKEKDMP-YFEVSAKNDINVVQAFEVLASRALL--RYQGTAENH 182
>gi|427787063|gb|JAA58983.1| Putative rab subfamily protein of small gtpase [Rhipicephalus
pulchellus]
Length = 208
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 105/174 (60%), Gaps = 11/174 (6%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+FL+KI++IG+ G GKT ++ R+ + + TIGVDFA+K L+ + + + +LQ+WD
Sbjct: 8 DFLFKIVLIGDCGVGKTCVVHRFKSGMYVERHGNTIGVDFAMKTLTVEGKKV-KLQIWDT 66
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T+ YY+ A G IV+D+T+ ++F ++ +W ++ V G+ +P +L+
Sbjct: 67 AGQERFRTITQSYYRSANGVIIVYDITKRSSFLSLPRWVEE----VRRYTGSNVPLLLVG 122
Query: 576 NKCD-QPKEGIANNPAK--IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD + + A+ D++ + F ETSAK+N NI+ L ++
Sbjct: 123 NKCDCESLREVTQEEAQALADQYPE---FMATIETSAKENTNIESVFVMLATEL 173
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 119/214 (55%), Gaps = 10/214 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF + + D + +
Sbjct: 1 MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVT-M 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +VFDV + +FDA+ W+ + + + D + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQK-ILEN 629
V+L NK D + + + F + +FETSAK+ IN++ A + + + +L+
Sbjct: 120 FVVLGNKIDVEESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQE 179
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + +GD +N + + ++G CAC
Sbjct: 180 ESEEFSGDFQD------PINIHIENDRDG--CAC 205
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ + FS + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T TF+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D + + + K + +EH + ETSAK NINID A L + IL+
Sbjct: 122 NKSDMEDKRVVST-EKGEAIAREHGIR-FMETSAKANINIDQAFSELAEAILD 172
>gi|348500494|ref|XP_003437808.1| PREDICTED: ras-related protein Rab-3A-like [Oreochromis niloticus]
Length = 219
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 19 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 77
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 133
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD E + A+ + E +FE SAKDNIN+ + LV I E +
Sbjct: 134 NKCDMEDERVV--AAERGRQLSEQLGFEFFEASAKDNINVKQTFERLVDIICERMAESLD 191
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ + A + Q ++ ++CAC
Sbjct: 192 NNDPTITGAKQGPQLSEQPQRSHQDCAC 219
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 13/213 (6%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG+ GK+ ++ R+ + Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MSNDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W ++D N
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRY-----ANDSV 114
Query: 571 C-VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
C +L+ NKCD + + + F E + ETSAKD+IN++ A T+ +I
Sbjct: 115 CKLLVGNKCDLVENKVVDTETA-KAFADELGIP-FLETSAKDSINVEQAFLTMAGEI--- 169
Query: 630 DKVQANGDSHATSEAVFSLNRNSQETKNGRNCA 662
K + +AT+ + ++ Q + NC
Sbjct: 170 -KKKMGNQPNATARSSSTVQMKGQPIQQNSNCC 201
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQAN 635
NKCD + A + + +EH+ + ETSAK N NI+ A + L + IL DKV
Sbjct: 122 NKCDMADKR-AVRKERGENIAREHDIR-FMETSAKANTNIELAFRELAEAIL--DKVAGK 177
Query: 636 GDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ V +NR++ E C
Sbjct: 178 ETTDNPDRVV--VNRSTGERLPAYKACC 203
>gi|255634504|gb|ACU17616.1| unknown [Glycine max]
Length = 206
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG D K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADSVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>gi|149059323|gb|EDM10330.1| RAB3C, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 225
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++K+L+IG GKTS + RY F+ + +T+G+DF +K + + +E I+LQ+WD
Sbjct: 26 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV-FKNEKRIKLQIWDT 84
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L
Sbjct: 85 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVILAG 140
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + + + + E +FETSAKDNIN+ + LV I +
Sbjct: 141 NKCDMEDERVVSTERG--QRLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 191
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 4 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI-KLQIWDT 62
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +FD + W ++++ + + + ++L
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS----SDVERMILG 118
Query: 576 NKCDQ-PKEGIANNPAK---IDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD K ++ + ID IK + ETSAK +IN+++A TL + I+
Sbjct: 119 NKCDMNDKRQVSREKGEKLAIDYGIK------FLETSAKSSINVEEAFFTLARDIM 168
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MSSRKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV A +FD + W+ + + + D P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPEGFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D ++ + + F + +FETSAK+ +N++ A + + + L +
Sbjct: 120 FVVLGNKVDVGEDKRVISTKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 631 KVQ 633
+ Q
Sbjct: 180 ESQ 182
>gi|6323291|ref|NP_013363.1| Ypt6p [Saccharomyces cerevisiae S288c]
gi|2500077|sp|Q99260.1|YPT6_YEAST RecName: Full=GTP-binding protein YPT6
gi|577182|gb|AAB67381.1| Ylr262cp [Saccharomyces cerevisiae]
gi|927545|emb|CAA42166.1| Ypt6p [Saccharomyces cerevisiae]
gi|45269764|gb|AAS56262.1| YLR262C [Saccharomyces cerevisiae]
gi|151941095|gb|EDN59475.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405321|gb|EDV08588.1| GTP-binding protein YPT6 [Saccharomyces cerevisiae RM11-1a]
gi|207342890|gb|EDZ70519.1| YLR262Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148244|emb|CAY81491.1| Ypt6p [Saccharomyces cerevisiae EC1118]
gi|285813678|tpg|DAA09574.1| TPA: Ypt6p [Saccharomyces cerevisiae S288c]
gi|392297767|gb|EIW08866.1| Ypt6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKI+ +GE G GKTS+I R+++ F HY+ATIG+DF K + D +T IRLQLWD AGQ
Sbjct: 11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT-IRLQLWDTAGQ 69
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKC 578
ERF ++ Y +++ A IV+D+T+ +F+ + KW +D+ K D N I C+ + NK
Sbjct: 70 ERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDV--KNERGDENVILCI-VGNKS 126
Query: 579 DQPKE 583
D E
Sbjct: 127 DLSDE 131
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+K+L+IGE G GKT ++ R+ F+ + +TIG+DF ++ + D + I +LQ+WD
Sbjct: 7 DYLFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G IV+D+T +FD V W ++++ + + +LL
Sbjct: 66 AGQERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIEENAS----EDVELMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
NKCD +E A + + ++ ++ + ETSAK NIN+++A L + I
Sbjct: 122 NKCDM-EESRAVSKEQGEKLASDYGIP-FLETSAKANINVEEAFFQLARNI 170
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT I+ R+ FS + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T TF+ ++KW +++D + ++L
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHAN----EDVEKMILG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NK D + + + A+ + +EH + ETSAK +INID A L + ILE
Sbjct: 122 NKSDMEDKRVVST-ARGEAIAREHGIR-FMETSAKADINIDRAFNELTEAILE 172
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 125/217 (57%), Gaps = 16/217 (7%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++LYKI++IG+ G GK++++ R+ F+ ++TIGV+FA + + + +TI + Q+WD
Sbjct: 12 DYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTI-KAQIWDT 70
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN-PIPCVLL 574
AGQER+ +T YY+ AVGA +V+D+ + AT+ +V +W +L D N I +L+
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELREN---ADRNFDIEIMLV 127
Query: 575 ANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN---- 629
NK D + ++ + AK EF ++H + ETSA D+ N+D A +T++ +I +
Sbjct: 128 GNKSDLRHLREVSTDEAK--EFAEKHKLL-FIETSALDSSNVDVAFQTILTQICHSMSRP 184
Query: 630 ---DKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
+ D+ + ++ ++++ G NCAC
Sbjct: 185 TPIGAPSGHDDNSPSIGTPVDISSDTKKPNQGNNCAC 221
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 102/177 (57%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ GK+ ++ R+ + Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W ++D N
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRY-----ANDSV 114
Query: 571 C-VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
C +L+ NKCD + + + F E + ETSAKD+IN++ A T+ +I
Sbjct: 115 CKLLVGNKCDLVENKVVDTQTA-KAFADELGIP-FLETSAKDSINVEQAFLTMAGEI 169
>gi|54696902|gb|AAV38823.1| RAB35, member RAS oncogene family [synthetic construct]
gi|54696908|gb|AAV38826.1| RAB35, member RAS oncogene family [synthetic construct]
gi|60830162|gb|AAX36914.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365974|gb|AAX42793.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61365979|gb|AAX42794.1| RAB35 member RAS oncogene family [synthetic construct]
gi|61370750|gb|AAX43546.1| RAB35 member RAS oncogene family [synthetic construct]
Length = 202
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GK+S++ R+ FS Y TIGVDF ++ + + E + +L
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ G +V+DVT A +F V +W +++ + +
Sbjct: 60 QIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVC 114
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSG-----WFETSAKDNINIDDAAKTLVQK 625
+L+ NK D P+ K+ E + F+G FETSAK+N+N+++ + +
Sbjct: 115 RILVGNKNDDPER-------KVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITEL 167
Query: 626 ILENDKVQANGDSHATSEAVFSLNRNSQETK 656
+L K V L +NS+ K
Sbjct: 168 VLRAKKDNLAKQQQQQQNDVVKLTKNSKRKK 198
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M ++ ++L+K+L+IG+ GK+ ++ R+ + Y +TIGVDF ++ + D +TI +L
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A G IV+DVT +F+ V +W ++D N
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRY-----ANDSV 114
Query: 571 C-VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKI 626
C +L+ NKCD + + F E + ETSAKD+IN++ A T+ +I
Sbjct: 115 CKLLVGNKCDLVDNKVVDTQTA-KAFADELGIP-FLETSAKDSINVEQAFLTMAGEI 169
>gi|91077598|ref|XP_973418.1| PREDICTED: similar to RabX4 CG31118-PA [Tribolium castaneum]
gi|270002179|gb|EEZ98626.1| hypothetical protein TcasGA2_TC001149 [Tribolium castaneum]
Length = 220
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 10/171 (5%)
Query: 459 YKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQ 518
YKILV+G+ GKT I+ R+ + + Y +TIG+DF K+++ D I+LQ+WD AGQ
Sbjct: 9 YKILVLGDSNVGKTCIVHRFCDERYYDTYISTIGIDFKQKIVNLDG-VPIKLQIWDTAGQ 67
Query: 519 ERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNP-IPCVLLANK 577
ERF +T YY+ A+G +++DVT +F+ + W Q+++ + +P + VL NK
Sbjct: 68 ERFRTLTTAYYRGAMGILLLYDVTNLESFNHITYWLQNIEE-----NASPHVITVLAGNK 122
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
C+ + A+ + I EH FE S KDN+NI+ + TL +KI E
Sbjct: 123 CESADRIV---DAESGQKIAEHFDLTHFEVSCKDNVNIEASFMTLARKIRE 170
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 108/176 (61%), Gaps = 9/176 (5%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
DK ++++K+++IG+ GK+ I+ R+ FS +ATIGV+F + L DH+++ + Q+
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSV-KAQI 63
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WD AGQER+ +T YY+ A+GA +V+D+T+ +FD + +W ++L D N I +
Sbjct: 64 WDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGH---ADKN-IVIM 119
Query: 573 LLANKCDQPKE-GIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
L+ NK D E ++ AK EF ++ N + ETSA N+++A +T++ +I
Sbjct: 120 LVGNKSDLEDERAVSTEDAK--EFAEKENVF-FLETSALQATNVENAFQTVLSEIF 172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.123 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,343,939,851
Number of Sequences: 23463169
Number of extensions: 454934863
Number of successful extensions: 1868625
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12492
Number of HSP's successfully gapped in prelim test: 28671
Number of HSP's that attempted gapping in prelim test: 1683427
Number of HSP's gapped (non-prelim): 136535
length of query: 663
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 514
effective length of database: 8,863,183,186
effective search space: 4555676157604
effective search space used: 4555676157604
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 80 (35.4 bits)