BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4094
(663 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q13637|RAB32_HUMAN Ras-related protein Rab-32 OS=Homo sapiens GN=RAB32 PE=1 SV=3
Length = 225
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 159/177 (89%), Gaps = 1/177 (0%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQLWD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYYKEAVGAF+VFD++R++TF+AVLKWK DLD+KV LP+G+PIP VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANKCDQ K+ + +P+++D+F KEH F+GWFETSAKDNINI++AA+ LV+KIL N +
Sbjct: 142 ANKCDQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197
>sp|Q9CZE3|RAB32_MOUSE Ras-related protein Rab-32 OS=Mus musculus GN=Rab32 PE=2 SV=3
Length = 223
Score = 299 bits (765), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 164/192 (85%), Gaps = 1/192 (0%)
Query: 440 GSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKV 499
G ++ + + P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKV
Sbjct: 5 GLGQQGASATAAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 64
Query: 500 LSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDA 559
L+WD T++RLQLWDIAGQERFGNMTRVYYKEA+GAF+VFD++R++TFDAVLKWK DLD+
Sbjct: 65 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDS 124
Query: 560 KVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAA 619
KV LP+G+PIP VLLANKCDQ K+ + +P+++D+F K+H F+GWFETSAKDNINID+A
Sbjct: 125 KVHLPNGSPIPAVLLANKCDQKKDN-SQSPSQMDQFCKDHGFTGWFETSAKDNINIDEAT 183
Query: 620 KTLVQKILENDK 631
+ LV+ +L N +
Sbjct: 184 RFLVENMLANQQ 195
>sp|Q06AU5|RAB32_PIG Ras-related protein Rab-32 OS=Sus scrofa GN=RAB32 PE=2 SV=1
Length = 226
Score = 298 bits (763), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 132/180 (73%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 452 PDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQ 511
P+ RE L+K+LVIGELG GKTSIIKRYVHQ FS HYRATIGVDFALKVL+WD T++RLQ
Sbjct: 21 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 80
Query: 512 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPC 571
LWDIAGQERFGNMTRVYYKEAVGA +VFD++R + F+AVLKWK DLD+KV LP+G+PIP
Sbjct: 81 LWDIAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPA 140
Query: 572 VLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
VLLANKCDQ K+ NP+++D+F KEH F+GWFETSAKDNINID+AA+ LV+ IL N +
Sbjct: 141 VLLANKCDQKKDS-GQNPSQMDQFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQ 199
>sp|Q8QZZ8|RAB38_MOUSE Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1
Length = 211
Score = 284 bits (726), Expect = 2e-75, Method: Composition-based stats.
Identities = 131/176 (74%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K+TLP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>sp|P57729|RAB38_HUMAN Ras-related protein Rab-38 OS=Homo sapiens GN=RAB38 PE=1 SV=1
Length = 211
Score = 283 bits (723), Expect = 4e-75, Method: Composition-based stats.
Identities = 130/176 (73%), Positives = 153/176 (86%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
+E LYK+LVIG+LG GKTSIIKRYVHQ FS HYRATIGVDFALKVL WD ET++RLQLWD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERFGNMTRVYY+EA+GAFIVFDVTR ATF+AV KWK DLD+K++LP+G P+ VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
ANKCDQ K+ + NN K+D+F KEH F GWFETSAK+NINID+A++ LV+ IL N+
Sbjct: 126 ANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>sp|Q54QR3|RB32A_DICDI Ras-related protein Rab-32A OS=Dictyostelium discoideum GN=rab32A
PE=1 SV=1
Length = 219
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+LYKILV+G++G GKTSIIKR+VH FS HY++TIGVDFALKV++WD +T +RLQLWDI
Sbjct: 13 EYLYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDI 72
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTL-PDGNPIPCVLL 574
AGQERFG+MTRVYYKEAVGA I FDVTR +TF+AV KWK D+D+KVT D PIP VLL
Sbjct: 73 AGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLL 132
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQA 634
ANKCD K+ +D++ K++ F GWFETSAK+N+NI+ AA+ LV IL+ND V+
Sbjct: 133 ANKCDLGKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKND-VRR 191
Query: 635 NGDSHATSEAVFSLNRNSQETKNGRNCA 662
N T + LN+ Q T G +C
Sbjct: 192 NQPIEGTIQPG-DLNKQPQPTSTGPSCC 218
>sp|Q5R7A4|RAB7L_PONAB Ras-related protein Rab-7L1 OS=Pongo abelii GN=RAB7L1 PE=2 SV=1
Length = 203
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>sp|O14966|RAB7L_HUMAN Ras-related protein Rab-7L1 OS=Homo sapiens GN=RAB7L1 PE=1 SV=1
Length = 203
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W I+RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP+G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
ANKCD ++ + +ID F KE+ F+GW ETS K+N NI++A + L++K++ N
Sbjct: 124 ANKCDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRN 176
>sp|Q63481|RAB7L_RAT Ras-related protein Rab-7L1 OS=Rattus norvegicus GN=Rab7l1 PE=2
SV=1
Length = 204
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>sp|Q91YQ1|RAB7L_MOUSE Ras-related protein Rab-7L1 OS=Mus musculus GN=Rab7l1 PE=2 SV=1
Length = 204
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 131/177 (74%), Gaps = 2/177 (1%)
Query: 455 REFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWD 514
R+ L+K+LV+G+ GKTS+++RY FS HY++T+GVDFALKVL W ++RLQLWD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 515 IAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLL 574
IAGQERF +MTR+YY++A I+FDVT A TF +WKQDLD+K+TLP G P+PC+LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
ANK D ++ + +ID F KE+ F+GW ETS K+N NI++A + LV+K++ N +
Sbjct: 124 ANKSDLSPWAVSRD--QIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSR 178
>sp|Q55E31|RB32B_DICDI Ras-related protein Rab-32B OS=Dictyostelium discoideum GN=rab32B
PE=3 SV=1
Length = 260
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 453 DKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQL 512
D + LYK+L+IG+ GK+SIIKRY FSP+Y+ TIGVDF++K + W+ I+ LQL
Sbjct: 54 DIEKHLYKVLLIGDYAVGKSSIIKRYCTGIFSPNYKLTIGVDFSVKDIEWEKNKIVSLQL 113
Query: 513 WDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCV 572
WDIAG ERFG MTRVYY+ A+ A IVFD++R +TFDAV KW++D+++KV L + PIP +
Sbjct: 114 WDIAGHERFGTMTRVYYRYAIAAIIVFDLSRPSTFDAVTKWREDVNSKVVLANQEPIPVL 173
Query: 573 LLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
LLANK D + + +D F KE+NF GWF TSA ++ NI++A L ++ILE
Sbjct: 174 LLANKSDLSTSYV--DSEMLDRFCKENNFIGWFATSASNDTNINEAMHFLTKEILE 227
>sp|Q8MXQ2|RB32C_DICDI Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C
PE=3 SV=2
Length = 224
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 115/176 (65%), Gaps = 9/176 (5%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
KILV+G+L GKTSII+RY H F P Y+ TIGVDF KVL + ++ LQLWDIAGQE
Sbjct: 30 KILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVL-LQLWDIAGQE 88
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RFG+MTRVY++ A GA IVFD TR+ TF WK D+D + +P +LLANKCD
Sbjct: 89 RFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCF---NNENLPTILLANKCD 145
Query: 580 --QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
P P I+ F +++ F+ +F TSAK++ I++A + LV+ ILE+ + Q
Sbjct: 146 LLTPPYTF---PEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILESYQTQ 198
>sp|P20337|RAB3B_HUMAN Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2
Length = 219
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 130/239 (54%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGQLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219
>sp|Q9CZT8|RAB3B_MOUSE Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1
Length = 219
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGIKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>sp|Q5KTJ7|RAB3B_MESAU Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2
SV=1
Length = 219
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GKT + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKTGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSLDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+D +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + AK ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMEDKRVV-PKAKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>sp|Q63941|RAB3B_RAT Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2
Length = 219
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 127/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV G T I + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGNTGIRDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVI--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ DS T +V ++ ++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 7/178 (3%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + H I+LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL-HGKKIKLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T A +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKVQ 633
NKCD + + +K ++ +EH +FETSAK NINI+ A TL + IL+ V+
Sbjct: 122 NKCDMEDKRVVLK-SKGEQIAREHAIR-FFETSAKANINIEKAFLTLAEDILQKTPVK 177
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171
>sp|P28187|RAA5C_ARATH Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1
SV=1
Length = 214
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 121/210 (57%), Gaps = 10/210 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+P+ +ATIGV+F + + D + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D+TR++TF+ V +W +L+ T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELN---THSD-TTVAKMLIG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + ++++I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 182
Query: 635 NGDSHATSEAV--FSLNRNSQETKNGRNCA 662
N DS+ V SL +N E +C
Sbjct: 183 NSDSYKEELTVNRVSLVKNENEGTKTFSCC 212
>sp|P10948|RAB3B_BOVIN Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1
Length = 219
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 26/239 (10%)
Query: 429 SVVAGKTSITNGSSKEVSPYSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYR 488
SV GK + + S + ++++K+L+IG GKTS + RY F+P +
Sbjct: 3 SVTDGKAGVKDASDQNF----------DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFV 52
Query: 489 ATIGVDFALKVLSWDHETIIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFD 548
+T+G+DF +K + + HE ++LQ+WD AGQER+ +T YY+ A+G +++D+T +F+
Sbjct: 53 STVGIDFKVKTV-YRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFN 111
Query: 549 AVLKWKQDLDAKVTLPDGNPIPCVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETS 608
AV QD ++ + +L+ NKCD +E + P + + E +FE S
Sbjct: 112 AV----QDWATQIKTYSWDNAQVILVGNKCDMEEERVV--PTEKGRLLAEQLGFDFFEAS 165
Query: 609 AKDNINIDDAAKTLVQKILENDKVQANGDSHATSEAVFSLNRNSQETKN----GRNCAC 663
AK+NI++ A + LV I DK+ D+ T ++ ++N++ + +NC+C
Sbjct: 166 AKENISVRQAFERLVDAIC--DKM---SDTLDTDPSLLGTSKNTRLSDTPPLLQQNCSC 219
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVLKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFNSLARDIL 170
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 7/172 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
+ L+K+L+IG+ G GKT ++ R+ F+ + +TIG+DF +K + + I +LQ+WD
Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWDT 65
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ A+G +V+D+T +F+ + KW +++D + +LL
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 121
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
NKCD + + K ++ +EH +FETSAK NINI+ A TL + IL
Sbjct: 122 NKCDMDDKRVV-PKGKGEQIAREHGIR-FFETSAKVNINIEKAFLTLAEDIL 171
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 104/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A + +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQREQA--ERLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL 170
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A ++ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRQVQREQA--EKLAREHRIR-FFETSAKSSVNVDEAFSSLARDIL 170
>sp|Q54P07|RB32D_DICDI Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D
PE=3 SV=1
Length = 228
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG++ GKTSI+ R + F+ Y++TIG DF K + ++ I +QLWD AGQE
Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTF-YQNDIITHIQLWDTAGQE 69
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN--PIPCVLLANK 577
++ +T +++ + +VFD++ ++F + W + +K PDG +P +LLANK
Sbjct: 70 KYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLANK 129
Query: 578 CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDK 631
D + + ++I+++ +H + ++E SAK +INI ++ LV+ I+E DK
Sbjct: 130 SDSLTRAV--DQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIEQDK 181
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 9/178 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + L+K+L+IG+ G GKT +I R+ F+ Y +TIG+DF ++ + + + I +L
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKI-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ A+G +V+D+T +F+ + W + + + +
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA----GVE 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+LL NKCD + K + A D+ +EH +FETSAK ++N+D+A +L + IL
Sbjct: 116 RLLLGNKCDMEAKRKVQKEQA--DKLAREHGIR-FFETSAKSSMNVDEAFSSLARDIL 170
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 5/168 (2%)
Query: 460 KILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDIAGQE 519
K+++IG LG GKTS++ RYVH+ F Y+ T+G K++ + +T ++LQ+WD GQE
Sbjct: 10 KLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILE-DTTLKLQIWDTGGQE 68
Query: 520 RFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLANKCD 579
RF +M +YK + G + FDVT +F+A+ W+ D+ AK T+P P P V+L NK D
Sbjct: 69 RFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAK-TIPMEQPYPMVVLGNKID 127
Query: 580 QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKIL 627
+ A+ + KE + +FE SAK++IN+ A + L + L
Sbjct: 128 LEDRQVPQEVAQ--GWCKEKDIP-YFEVSAKNDINVVQAFEMLASRAL 172
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 107/179 (59%), Gaps = 1/179 (0%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M K++ L K++++GE G GKTSI+ +YV++ FS Y+ATIG DF K + D + ++ L
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
QLWD AGQERF ++ +Y+ A +V+DV + +F+ + W+ + + + + P
Sbjct: 60 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D ++ + +K F + +FETSAK+ IN+ +A +T+ + LEN
Sbjct: 120 FILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 19/226 (8%)
Query: 448 YSKMPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETI 507
Y K ++++K+++IG+ GK+ I+ R+ FS ++TIGV+F + L DH+T+
Sbjct: 7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTV 66
Query: 508 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGN 567
+ Q+WD AGQER+ +T YY+ AVGA +V+D+T+ TFD + +W ++L D N
Sbjct: 67 -KAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNH---ADKN 122
Query: 568 PIPCVLLANKCDQPKE-GIANNPAKIDEFI-KEHNFSGWFETSAKDNINIDDAAKTLVQK 625
I +L+ NKCD + + AK EF KE F + ETSA + N++ A T++ +
Sbjct: 123 -IVIILIGNKCDLVNQRDVPTEDAK--EFAEKEGLF--FLETSALEATNVESAFTTVLTE 177
Query: 626 I--------LENDKVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
I L D+ Q NG+S + S + +QE RN C
Sbjct: 178 IYNIVNKKSLAADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCC 223
>sp|P01123|YPT1_YEAST GTP-binding protein YPT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT1 PE=1 SV=2
Length = 206
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 9/179 (5%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M + ++L+K+L+IG G GK+ ++ R+ ++ Y +TIGVDF +K + D +T+ +L
Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV-KL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +T YY+ + G IV+DVT +F+ V W Q++D T + +
Sbjct: 60 QIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVL 115
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
+L+ NKCD + K + + AK EF + N + ETSA D+ N++DA T+ ++I E
Sbjct: 116 KLLVGNKCDLKDKRVVEYDVAK--EF-ADANKMPFLETSALDSTNVEDAFLTMARQIKE 171
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+V+ L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQE 177
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 119/213 (55%), Gaps = 6/213 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF +++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + K N +FETSAK+ IN++ A +T+ + L
Sbjct: 120 FVVLGNKIDLENRQVATKRAQAWSYSK--NNIPYFETSAKEAINVEQAFQTIARNAL--- 174
Query: 631 KVQANGDSHATSEAVFSLNRNSQETKNGRNCAC 663
K + + + L++N + + +C+C
Sbjct: 175 KQETEVELYNEFPEPMKLDKNDRAKTSAESCSC 207
>sp|Q4R4R9|RAB3A_MACFA Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2
SV=1
Length = 220
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|P20336|RAB3A_HUMAN Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1
Length = 220
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|P63012|RAB3A_RAT Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1
Length = 220
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|Q06AU3|RAB3A_PIG Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1
Length = 220
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|P63011|RAB3A_MOUSE Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1
Length = 220
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 104/178 (58%), Gaps = 10/178 (5%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++L+KI+VIG+ G GK+S++ R+ +S Y +TIGVDF +K + D+ T I+LQ+WD
Sbjct: 5 DYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTT-IKLQIWDT 63
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLK-WKQDLDAKVTLPDGNPIPCVLL 574
AGQERF +T YY+ A G V+DVT +FD + + W QD+D T + + +L+
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYAT----SNVCKLLI 119
Query: 575 ANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILENDKV 632
NK D + + A + + E N + E SAK + N++ A T+ + + DKV
Sbjct: 120 GNKIDLAESRVV--SADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKAL--KDKV 173
>sp|Q9SIP0|RAA5D_ARATH Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=2
SV=1
Length = 219
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
E+L+KI++IG+ GK++++ RY F+ H +ATIGV+F + + + + + + Q+WD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV-KAQIWDT 68
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQERF +T YY+ AVGA +V+D++R +TF++V +W LD T D + +L+
Sbjct: 69 AGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRW---LDELKTHSD-TTVARMLVG 124
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKVQA 634
NKCD E I + + + E + ETSA D+ N+ A + +++ I N + Q
Sbjct: 125 NKCDL--ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
Query: 635 NGDSHAT 641
N D++ T
Sbjct: 183 NSDTYKT 189
>sp|P11023|RAB3A_BOVIN Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3
Length = 220
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 7/173 (4%)
Query: 456 EFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLWDI 515
++++KIL+IG GKTS + RY F+P + +T+G+DF +K + + ++ I+LQ+WD
Sbjct: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDT 78
Query: 516 AGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVLLA 575
AGQER+ +T YY+ A+G +++D+T +F+AV QD ++ + +L+
Sbjct: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAV----QDWSTQIKTYSWDNAQVLLVG 134
Query: 576 NKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
NKCD E + ++ + +H +FE SAKDNIN+ + LV I E
Sbjct: 135 NKCDMEDERVVSSERGRQ--LADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L E ++ L
Sbjct: 1 MATRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQ-IGEKLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+DV +FD + W ++ + + D P
Sbjct: 60 QIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFP 119
Query: 571 CVLLANK--CDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILE 628
++L NK D + ++ D N +FETSAKD+ N+D+A T+ + L
Sbjct: 120 FIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIP-YFETSAKDDFNVDEAFLTIAKTALA 178
Query: 629 NDKVQ 633
N+ Q
Sbjct: 179 NEHEQ 183
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L+KI+++G+ G GKTS++ +YV+ F+ YRAT+G DF K + D + ++ L
Sbjct: 1 MASQKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMID-DRMVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +V+D+T +FD++ W+ + + D P
Sbjct: 60 QIWDTAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D+ E +K ++ K H +FE SAKD NI+ A + + + +
Sbjct: 120 FVVLGNKLDKATERKVQE-SKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQE 178
Query: 631 KVQANGDSHATSEAVFSLNRNSQ--ETKNGRNC 661
K D +L + SQ + K G C
Sbjct: 179 K-----DEEIFFPTTVTLTKQSQKPQAKQGGCC 206
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 2/184 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +R L K++V+G+ G GKTS++ +YVH+ FS Y+ATIG DF K L D + ++ L
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQID-DRLVTL 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A + +DV +FD + W ++ + PD P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFP 119
Query: 571 CVLLANKCD-QPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN 629
+LL NK D + K ++ +FETSAK++ N+D A + + L N
Sbjct: 120 FILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALAN 179
Query: 630 DKVQ 633
+ Q
Sbjct: 180 EHEQ 183
>sp|P19892|RAA5E_ARATH Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2
SV=1
Length = 218
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 8/187 (4%)
Query: 454 KREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRLQLW 513
+ E+L+KI+VIG+ GK++++ RY FS + +ATIGV+F + + + + + + Q+W
Sbjct: 8 REEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV-KAQIW 66
Query: 514 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIPCVL 573
D AGQERF +T YY+ AVGA +V+D+TR TF++V +W +L + + +L
Sbjct: 67 DTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDEL----KIHSDTTVARML 122
Query: 574 LANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEN-DKV 632
+ NKCD E I + + + E + ETSA D+ N+ A + ++ I N +
Sbjct: 123 VGNKCDL--ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRK 180
Query: 633 QANGDSH 639
Q N D++
Sbjct: 181 QLNSDTY 187
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 451 MPDKREFLYKILVIGELGAGKTSIIKRYVHQFFSPHYRATIGVDFALKVLSWDHETIIRL 510
M +++ L K++++G+ G GKTS++ +YV++ FS Y+ATIG DF K + D + ++ +
Sbjct: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59
Query: 511 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRAATFDAVLKWKQDLDAKVTLPDGNPIP 570
Q+WD AGQERF ++ +Y+ A +VFDVT TF + W+ + + + D P
Sbjct: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119
Query: 571 CVLLANKCDQPKEGIANNPAKIDEFIKEHNFSGWFETSAKDNINIDDAAKTLVQKILEND 630
V+L NK D +A A+ + N +FETSAK+ IN++ A +T+ + L+ +
Sbjct: 120 FVVLGNKIDLENRQVATKRAQ--AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.123 0.335
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,166,129
Number of Sequences: 539616
Number of extensions: 10969367
Number of successful extensions: 48635
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 2114
Number of HSP's that attempted gapping in prelim test: 36882
Number of HSP's gapped (non-prelim): 8046
length of query: 663
length of database: 191,569,459
effective HSP length: 124
effective length of query: 539
effective length of database: 124,657,075
effective search space: 67190163425
effective search space used: 67190163425
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 65 (29.6 bits)